BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 037695
         (701 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score = 1047 bits (2707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/738 (69%), Positives = 596/738 (80%), Gaps = 57/738 (7%)

Query: 1   MGTQDSSDLSLFGSDNAEFDKSEKCDFDIFAEEVEEGEDGSD-SDDHFMVLDSFDKYRVN 59
           MG  +S DL  FGS   + D +E+      + ++EEG  G+D +DD  MVL+SF      
Sbjct: 1   MGFGESRDLGHFGSGLDDLDDNEE------SSDIEEG--GNDHNDDDLMVLNSFTGGYRQ 52

Query: 60  REEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA 119
            E IRR    EDE RHPLVRE+CRLIELRSAW+PKLEGELR+LLRSLKPRQ+CAVL+ Q 
Sbjct: 53  TEGIRRFEGGEDESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQT 112

Query: 120 DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF 179
           DERVAL+FFYWADRQWRYRHDPIVYY MLEILSKTKLCQGAKRVLRLMA+R IE RPEAF
Sbjct: 113 DERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAF 172

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
            Y+MV+YSRAGKLRNAM VL+MMQKA + P+L ICNTAIHVLV+GN+L KA+RFLERMQ+
Sbjct: 173 GYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQI 232

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
             I PNV+TYNCLIKGYCDLHR++DA++LI EMP KGCSPDK+SYYTVMG+LCKEKRIKE
Sbjct: 233 VEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKE 292

Query: 300 VRDLMEKMVNDSNLFHDQ------------------------------------------ 317
           VR LMEKM+ DSNL  DQ                                          
Sbjct: 293 VRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIV 352

Query: 318 ------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 GR+++AKE+VN+M   GCIPDVVTYT+V+NG C+  ++DQAKKML+QMY HGCK
Sbjct: 353 HSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCK 412

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PNTVSYTA LNGLC NG SLEAREM+N SEE+WW PNAITYSV+MHG RREGK SEACD+
Sbjct: 413 PNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDL 472

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           VREM+KKGFFPTPVEINLLIQSLC+E K+D AK+FM++CLN GCAVNVVNFT++I GFCQ
Sbjct: 473 VREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQ 532

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           K DLE ALSLLDDMYL  K PD VTYTTIIDAL K GR+EEAT+L MKML  GL+PT VT
Sbjct: 533 KDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVT 592

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           YRTVIH+YC++GRVEDLLKLLEKMLS+Q+CRTAYNQVIE LCSFG LE+A K+LGKVLRT
Sbjct: 593 YRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRT 652

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           ASK DA+TCH+L+ESYL+KGIPL++Y VACRMFNRNLIPDLKLC+KVS++L+LEGKSEEA
Sbjct: 653 ASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEA 712

Query: 672 DTLMLRFVERGHIQPKSE 689
           D L+LRFVERG I P+ +
Sbjct: 713 DKLILRFVERGRISPQCQ 730


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score = 1040 bits (2690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/738 (69%), Positives = 592/738 (80%), Gaps = 57/738 (7%)

Query: 1   MGTQDSSDLSLFGSDNAEFDKSEKCDFDIFAEEVEEGEDGSD-SDDHFMVLDSFDKYRVN 59
           MG  +S DL  FGS   + D +E+      + ++EEG  G+D +DD  MVL+SF      
Sbjct: 1   MGFGESRDLGHFGSGLDDLDDNEE------SSDIEEG--GNDHNDDDLMVLNSFTGGYRQ 52

Query: 60  REEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA 119
            E IRR    EDE RHPLVRE+CRLIELRSAW+PKLEGELR+LLRSLKPRQ+CAVL+ Q 
Sbjct: 53  TEGIRRFEGGEDESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQT 112

Query: 120 DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF 179
           DERVAL+FFYWADRQWRYRHDPIVYY MLEILSKTKLCQGAKRVLRLMA+R IE RPEAF
Sbjct: 113 DERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAF 172

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
            Y+MV+YSRAGKLRNAM  L+MMQKA + P+L ICNTAIHVLV+GN+L KA+RFLERMQ+
Sbjct: 173 GYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQI 232

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
             I PNV+TYNCLIKGYCDLHR++DA +LI EMP KGCSPDK+SYYTVMG+LCKEKRIKE
Sbjct: 233 VEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKE 292

Query: 300 VRDLMEKMVNDSNLFHDQ------------------------------------------ 317
           +R LMEKM+ DSNL  DQ                                          
Sbjct: 293 LRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIV 352

Query: 318 ------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 GR+++AKE+VN+M   GCIPDVVTYT+V+NG C+  ++DQAKKML+QMY HGCK
Sbjct: 353 HSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCK 412

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PNTVSYTA LNGLC NG SLEAREM+N SEE WW PNAITYSV+MHG RREGK SEACD+
Sbjct: 413 PNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDL 472

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           VREM+KKGFFPTPVEINLLIQSLC+E K+D AK+FM++CLN GCAVNVVNFT++I GFCQ
Sbjct: 473 VREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQ 532

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           K DLE ALSLLDDMYL  K PD VTYTTIIDAL K GR+EEAT+L MKML  G +PT VT
Sbjct: 533 KDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVT 592

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           YRTVIH+YC++GRVEDLLKLLEKMLS+Q+CRTAYNQVIE LCSFG LE+A K+LGKVLRT
Sbjct: 593 YRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRT 652

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           ASK DA+TCH+L+ESYL+KGIPL++Y VACRMFNRNLIPDLKLC+KVS++L+LEGKSEEA
Sbjct: 653 ASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEA 712

Query: 672 DTLMLRFVERGHIQPKSE 689
           D L+LRFVERG I P+ +
Sbjct: 713 DKLILRFVERGRISPQCQ 730


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  981 bits (2537), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/698 (69%), Positives = 569/698 (81%), Gaps = 48/698 (6%)

Query: 44  DDHFMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLL 103
           D  FM L+S  +    +E+I R+ +EE+EFRHPLVREVCRLIE RSAW+ KLEG+LR LL
Sbjct: 39  DSVFMALNSVSRNCGQKEDIWRIEIEEEEFRHPLVREVCRLIERRSAWNAKLEGDLRRLL 98

Query: 104 RSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
           RSLKPRQ+CAVL+ Q+DER+AL FFYWA RQWRYRHDPIVYYMML++LSKTKLCQGA+RV
Sbjct: 99  RSLKPRQVCAVLQLQSDERIALDFFYWAGRQWRYRHDPIVYYMMLQVLSKTKLCQGARRV 158

Query: 164 LRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           LRLM RRGI  RPEAF+++MV+YSRAGKLRNAM VL+MMQKA V PNLLICNTAIHVLV+
Sbjct: 159 LRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVM 218

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
            NKL KALRFLERMQL GITPNV+TYNCLIKGYCDL++++ A++LI EMP KGC PDKVS
Sbjct: 219 ANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVS 278

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ-------------------------- 317
           YYTVMG+LC++KRIKEVR+LMEKMV D+ LF DQ                          
Sbjct: 279 YYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRET 338

Query: 318 ----------------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                                 GR++ AKE+VN+M   GC PDVVTYTAVVNG C+VG++
Sbjct: 339 EERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKV 398

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           ++AKKMLQQMY HGCKPNTVSYTA LNGLC +G SLEAREM+NTSEE+WWTPNAITYSVV
Sbjct: 399 EEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVV 458

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           MHGLRREGKLSEACDVVREM+ KGFFPTPVEINLLI+SLC E KM+ AKKFM+ECLN+GC
Sbjct: 459 MHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGC 518

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
           AVN VNFT++I GFCQ  +++ ALSLLDDMYL  K PD VT+T IIDAL K GR+EEAT 
Sbjct: 519 AVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATV 578

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSF 595
             MKML KGL PT VTYR VIH+YC++GRVE+L+KLL KMLS+ KCRTAYNQVIE LC+F
Sbjct: 579 YTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRTAYNQVIEKLCNF 638

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
           G  E A K++G VLRTAS+ DA+TCH+L+ESYL+KGIPL AYKVACRMF+RNLIPDLKLC
Sbjct: 639 GNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDLKLC 698

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQ 693
           +K+S++L+LEGK EEAD LML+FV+RG+I P S +HL+
Sbjct: 699 EKLSKKLVLEGKLEEADNLMLQFVQRGNISPDSSQHLK 736


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  978 bits (2529), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/738 (66%), Positives = 567/738 (76%), Gaps = 88/738 (11%)

Query: 1   MGTQDSSDLSLFGSDNAEFDKSEKCDFDIFAEEVEEGEDGSD-SDDHFMVLDSFDKYRVN 59
           MG  +S DL  FGS   + D +E+      + ++EEG  G+D +DD  MVL+SF      
Sbjct: 95  MGFGESRDLGHFGSGLDDLDDNEE------SSDIEEG--GNDHNDDDLMVLNSFTGGYRQ 146

Query: 60  REEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA 119
            E IRR    EDE RHPLVRE+CRLIELRSAW+PKLEGELR+LLRSLKPRQ+CAVL+ Q 
Sbjct: 147 TEGIRRFEGGEDESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQT 206

Query: 120 DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF 179
           DERVAL+FFYWADRQWRYRHDPI                                RPEAF
Sbjct: 207 DERVALRFFYWADRQWRYRHDPIR-------------------------------RPEAF 235

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
            Y+MV+YSRAGKLRNAM VL+MMQKA + P+L ICNTAIHVLV+GN+L KA+RFLERMQ+
Sbjct: 236 GYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQI 295

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
             I PNV+TYNCLIKGYCDLHR++DA++LI EMP KGCSPDK+SYYTVMG+LCKEKRIKE
Sbjct: 296 VEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKE 355

Query: 300 VRDLMEKMVNDSNLFHDQ------------------------------------------ 317
           VR LMEKM+ DSNL  DQ                                          
Sbjct: 356 VRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIV 415

Query: 318 ------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 GR+++AKE+VN+M   GCIPDVVTYT+V+NG C+  ++DQAKKML+QMY HGCK
Sbjct: 416 HSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCK 475

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PNTVSYTA LNGLC NG SLEAREM+N SEE+WW PNAITYSV+MHG RREGK SEACD+
Sbjct: 476 PNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDL 535

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           VREM+KKGFFPTPVEINLLIQSLC+E K+D AK+FM++CLN GCAVNVVNFT++I GFCQ
Sbjct: 536 VREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQ 595

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           K DLE ALSLLDDMYL  K PD VTYTTIIDAL K GR+EEAT+L MKML  GL+PT VT
Sbjct: 596 KDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVT 655

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           YRTVIH+YC++GRVEDLLKLLEKMLS+Q+CRTAYNQVIE LCSFG LE+A K+LGKVLRT
Sbjct: 656 YRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRT 715

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           ASK DA+TCH+L+ESYL+KGIPL++Y VACRMFNRNLIPDLKLC+KVS++L+LEGKSEEA
Sbjct: 716 ASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEA 775

Query: 672 DTLMLRFVERGHIQPKSE 689
           D L+LRFVERG I P+ +
Sbjct: 776 DKLILRFVERGRISPQCQ 793


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  954 bits (2467), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/704 (65%), Positives = 551/704 (78%), Gaps = 52/704 (7%)

Query: 34  VEEGEDGSDSDDHFMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSP 93
           V  G++  D +D F VL S  +   +REE  R  +EEDE RHPLVREV RLI LRS+W+P
Sbjct: 103 VTSGDELDDDNDGFAVLKSIPQ---SREEAGRFDVEEDESRHPLVREVGRLIGLRSSWNP 159

Query: 94  KLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSK 153
           K EG++RNLLRSLKP Q+CAVLRSQ DERVAL+FFYWADRQWRYRHDP+VYY MLE+LSK
Sbjct: 160 KHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSK 219

Query: 154 TKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI 213
           TKLCQG++RVL LM RRGI   PEAFS +MV+YSRAG+LR+A+ VL++MQ+A V PNLLI
Sbjct: 220 TKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLI 279

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           CNT I V V  N+L KALRFLERMQ+ GI PNV+TYNC+I+GYCDLHR+++AI+L+++M 
Sbjct: 280 CNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMH 339

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ---------------- 317
            KGC PDKVSYYT+MGYLCKEKRI EVRDLM+KM  +  L  DQ                
Sbjct: 340 SKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHA 399

Query: 318 --------------------------------GRIEEAKELVNQMSQMG-CIPDVVTYTA 344
                                           GR+ EAK+L+N+M   G C PDVVTYTA
Sbjct: 400 DEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTA 459

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           VVNGFCR+GE+D+AKK+LQ M+ HG KPNTVSYTA LNG+C  GKSLEAREM+N SEE W
Sbjct: 460 VVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHW 519

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
           W+PN+ITYSV+MHGLRREGKLSEACDVVREMV KGFFP PVEINLL+QSLCR+G+   A+
Sbjct: 520 WSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEAR 579

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           KFM+ECLNKGCA+NVVNFT++I GFCQ  +L+ ALS+LDDMYL  K  D  TYTT++D L
Sbjct: 580 KFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL 639

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA 584
            K GR+ EATELM KML KG+ PT VTYRTVIHRYCQ+G+V+DL+ +LEKM+S+QKCRT 
Sbjct: 640 GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI 699

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YNQVIE LC  G LEEA  +LGKVLRTAS++DA TC+ L+E YL KG+PL AYKVACRMF
Sbjct: 700 YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMF 759

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           NRNLIPD+K+C+K+S+RL+L+GK +EAD LMLR VERGHI P+S
Sbjct: 760 NRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQS 803


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  954 bits (2465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/683 (68%), Positives = 548/683 (80%), Gaps = 49/683 (7%)

Query: 61  EEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQAD 120
           E+ RR+ + EDEFRHPLVRE+CRLIE RSAW+ KLEG++R+LLR LKPR +CAVL SQ+D
Sbjct: 3   EDWRRIEIHEDEFRHPLVREICRLIECRSAWNHKLEGKMRHLLRGLKPRLVCAVLLSQSD 62

Query: 121 ERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
           ERVAL FF+W+DRQWRYRHDPIVY +ML++LSKTKLCQGA+RVLRLM RRGI+  P+ F 
Sbjct: 63  ERVALDFFFWSDRQWRYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFC 122

Query: 181 YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
            +MV+YSRAGKLRNAM VL+MMQKA + PNLL+CNTAIHVLV+ N L KALRFLERMQL 
Sbjct: 123 CVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLL 182

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           GI PNV+TYNCLIKGYCDLHR++DA++LI EMPLKGCSPDKVSYYTVMG+LCK +RI+EV
Sbjct: 183 GIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREV 242

Query: 301 RDLMEKMVNDSNLFHDQ------------------------------------------- 317
            D++EKM  D+ L  DQ                                           
Sbjct: 243 MDVIEKM-EDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVD 301

Query: 318 -----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                GR+++AKE+VN+M   GCIPDVVTYTA++NGF + GE+ QA+KMLQQMY HGCKP
Sbjct: 302 SYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKP 361

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           NTVSYTAFL GLC  G S EAREM+  SEE+WWTPNAITYSVVMHG RREGKLS+ACDVV
Sbjct: 362 NTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVV 421

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           REM+ KGFFPTPVEINLL+QSLCR G++D AKKFM+ECLN GCAVN VNFT++I  FCQ+
Sbjct: 422 REMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQ 481

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
            D+E ALSLLDDMYL  K PD VTYTTIIDAL K GR+EEATEL +KML KG+ PT VTY
Sbjct: 482 DDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTY 541

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           RTVIHRY Q+GRVEDLL LL+KML++Q+CRTA+NQVIE LC+FG LE A K+LGKVLRTA
Sbjct: 542 RTVIHRYGQIGRVEDLLNLLDKMLTRQECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTA 601

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
           S+ DA+TCHVL+ESYL KGIPL AYKVACRMF+R+LIPDLKLC+KV ++L+ EGKSEEAD
Sbjct: 602 SRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEAD 661

Query: 673 TLMLRFVERGHIQPKSEEHLQRQ 695
            L LRFVERG+I      H Q +
Sbjct: 662 NLFLRFVERGNISSHCLRHSQTE 684


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  953 bits (2464), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/703 (65%), Positives = 550/703 (78%), Gaps = 54/703 (7%)

Query: 34  VEEGEDGSDSDDHFMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSP 93
           V  G++  D +D F VL S  +   +REE  R  +EEDE RHPLVREV RLI LRS+W+P
Sbjct: 103 VTSGDELDDDNDGFAVLKSIPQ---SREEAGRFDVEEDESRHPLVREVGRLIGLRSSWNP 159

Query: 94  KLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSK 153
           K EG++RNLLRSLKP Q+CAVLRSQ DERVAL+FFYWADRQWRYRHDP+VYY MLE+LSK
Sbjct: 160 KHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSK 219

Query: 154 TKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI 213
           TKLCQG++RVL LM RRGI   PEAFS +MV+YSRAG+LR+A+ VL++MQ+A V PNLLI
Sbjct: 220 TKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLI 279

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           CNT I V V  N+L KALRFLERMQ+ GI PNV+TYNC+I+GYCDLHR+++AI+L+++M 
Sbjct: 280 CNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMH 339

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ---------------- 317
            KGC PDKVSYYT+MGYLCKEKRI EVRDLM+KM  +  L  DQ                
Sbjct: 340 SKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHA 399

Query: 318 --------------------------------GRIEEAKELVNQMSQMGCIPDVVTYTAV 345
                                           GR+ EAK+L+N+M    C PDVVTYTAV
Sbjct: 400 DEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMD---CPPDVVTYTAV 456

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           VNGFCR+GE+D+AKK+LQ M+ HG KPNTVSYTA LNG+C  GKSLEAREM+N SEE WW
Sbjct: 457 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWW 516

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           +PN+ITYSV+MHGLRREGKLSEACDVVREMV KGFFP PVEINLL+QSLCR+G+   A+K
Sbjct: 517 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 576

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
           FM+ECLNKGCA+NVVNFT++I GFCQ  +L+ ALS+LDDMYL  K  D  TYTT++D L 
Sbjct: 577 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 636

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY 585
           K GR+ EATELM KML KG+ PT VTYRTVIHRYCQ+G+V+DL+ +LEKM+S+QKCRT Y
Sbjct: 637 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIY 696

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           NQVIE LC  G LEEA  +LGKVLRTAS++DA TC+ L+E YL KG+PL AYKVACRMFN
Sbjct: 697 NQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFN 756

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           RNLIPD+K+C+K+S+RL+L+GK +EAD LMLR VERGHI P+S
Sbjct: 757 RNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQS 799


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  949 bits (2453), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/675 (68%), Positives = 534/675 (79%), Gaps = 49/675 (7%)

Query: 61  EEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQAD 120
           + I RV + + EFRHP+VREVCRLI L SAW+P  EG LR+LLRSLKP  +CAVLRSQAD
Sbjct: 120 QSIARVEIGDSEFRHPVVREVCRLITLSSAWNPNFEGRLRHLLRSLKPPLVCAVLRSQAD 179

Query: 121 ERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
           ERVAL FFYWADRQWRY H P+VYY ML++LSKTKLCQGA+RVLRLM RRGIEC PEAF 
Sbjct: 180 ERVALNFFYWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFG 239

Query: 181 YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
           Y+MV+YSRAGKLRNA+ VL++MQKA V P+L ICNT I+VLV G KL KAL+FLERMQ+ 
Sbjct: 240 YVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVT 299

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           GI P+++TYN LIKGYCDL+RI+DA++LI  +P KGC PDKVSYYTVMG+LCKEK+I+EV
Sbjct: 300 GIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEV 359

Query: 301 RDLMEKMVNDSNLFHDQ------------------------------------------- 317
           + LMEKMV +SNL  DQ                                           
Sbjct: 360 KCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVH 419

Query: 318 -----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                GR++EAK LV  M   GC PDVVTYTA+V+GFCR+G +D+AKK+LQQMY HGCKP
Sbjct: 420 SFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKP 479

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           NTVSYTA LNGLCH+GKSLEAREMIN SEE WWTPNAITY  VMHGLRREGKLSEACD+ 
Sbjct: 480 NTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLT 539

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           REMV+KGFFPTPVEINLLIQSLC+  K+  AKK+++ECLNKGCA+NVVNFT++I GFCQ 
Sbjct: 540 REMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQI 599

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           GD+E ALS+LDDMYL  K PD VTYT + DAL K GR++EA EL++KMLSKGL PT VTY
Sbjct: 600 GDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTY 659

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           R+VIHRY Q GRV+D+L LLEKML +Q  RT YNQVIE LC FG LEEA K+LGKVLRTA
Sbjct: 660 RSVIHRYSQWGRVDDMLNLLEKMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTA 719

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
           SK DA+TCHVL+ESYL KG+ + AYKVACRMF RNL PDLKLC+KVS++L+L+GK  EAD
Sbjct: 720 SKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEAD 779

Query: 673 TLMLRFVERGHIQPK 687
            LMLRFVERG IQ K
Sbjct: 780 NLMLRFVERG-IQQK 793


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  942 bits (2435), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/692 (65%), Positives = 538/692 (77%), Gaps = 50/692 (7%)

Query: 41  SDSDDHFMVLDSFDKYRVN--REEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGE 98
           SD D+ F  + SFD    N  RE I R  ++E EFRHP+VREVCRLI LRS W+PK E  
Sbjct: 95  SDIDESFEFISSFDGNGSNKQRENIARFEIDESEFRHPIVREVCRLISLRSNWNPKFEEN 154

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           LR+LLRSL PR +CAVLRSQ DER+AL FFYWADRQWRYRHD IVYY ML+ILSKT+LCQ
Sbjct: 155 LRHLLRSLNPRLVCAVLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQ 214

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
           GA+R+LRLM RRGIE  PEAFSY+MV+YSRAG LRNA+ +L++MQKA V P+L ICNTAI
Sbjct: 215 GARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAI 274

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
           +VLV GNKL KALRFLERM++AGI P++++YNCLIKGYCD+HRI DA++LI EMP KGC 
Sbjct: 275 YVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCP 334

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ--------------------- 317
           PDKVSYYTVM +LCK+++++EV+ LME MV +SNL  DQ                     
Sbjct: 335 PDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALV 394

Query: 318 ---------------------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
                                        I++AK LV  M   GC PDVVTYTA+++GFC
Sbjct: 395 FLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFC 454

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           RVG++D+AKKMLQQMY HGCKPNTV+YT  LNGLCHNGKSLEAREMIN SEE WWTPNAI
Sbjct: 455 RVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAI 514

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TYS VMHGLRREGKLSEACD+ REM++KGF P PV+INLLIQSLCR   + GAKK+++EC
Sbjct: 515 TYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEEC 574

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           L+KGCAVNVVNFTS+I GFCQ GDL+ ALS+L+DMYL  K PD +TYTT+ DAL K  R+
Sbjct: 575 LHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRL 634

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIE 590
           +EA+EL++KML KG+ PT VTYR VIHR+CQ GRV+D++KLLEKM+++Q  +T YNQVIE
Sbjct: 635 DEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQPFKTVYNQVIE 694

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC FG  EEA K+LGKVLRTASK DA TCH+L+ESYL  G  L AYKVAC+MF RNLIP
Sbjct: 695 KLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIP 754

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           DLKLC+KV+++L+L+G   EAD LMLRFVERG
Sbjct: 755 DLKLCEKVTKKLVLDGMPAEADDLMLRFVERG 786



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 202/455 (44%), Gaps = 52/455 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + YY ++  L K +  +  KR++  M +      P+  +Y  L+ A S+ G   +A+ 
Sbjct: 336 DKVSYYTVMAFLCKDRKVEEVKRLMENMVQNS-NLIPDQVTYNTLIYALSKHGHADDALV 394

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            L   ++     + +  +  +        + KA   +  M   G  P+V+TY  +I G+C
Sbjct: 395 FLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFC 454

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME---------KMV 308
            + +I +A K++ +M   GC P+ V+Y  ++  LC   +  E R+++            +
Sbjct: 455 RVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAI 514

Query: 309 NDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             S + H    +G++ EA +L  +M + G +P+ V    ++   CR   +  AKK L++ 
Sbjct: 515 TYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEEC 574

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
            H GC  N V++T+ + G C  G    A  M+         P+AITY+ +   L ++ +L
Sbjct: 575 LHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRL 634

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA +++ +M+ KG  PTPV    +I   C+ G++D   K +++ + +     V N   +
Sbjct: 635 DEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQPFKTVYN--QV 692

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII-------DALSK------------ 526
           I   C  G+ EEA  LL  +       D  T   +I       +ALS             
Sbjct: 693 IEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNL 752

Query: 527 ----------------NGRVEEATELMMKMLSKGL 545
                           +G   EA +LM++ + +G+
Sbjct: 753 IPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERGI 787


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  936 bits (2419), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/742 (63%), Positives = 554/742 (74%), Gaps = 62/742 (8%)

Query: 4   QDSSDLSLFGSDNAEFDK-----SEKCDFDI-FAEEVEEGEDGSDSDDHFMVLDSF---- 53
           Q     S FG+ N +  K      E   F    ++  EE E  SD D+    ++SF    
Sbjct: 52  QTEGKYSNFGNFNDDLGKVGPGFQESLSFAASVSDGAEEEEGSSDDDESLEFINSFHGSN 111

Query: 54  DKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICA 113
           DK   N   I  + +++ EFRHP+VREVCRLI L SAW+P  EG LR+LLRSLKP  +CA
Sbjct: 112 DKQTQN---IASIEIDDSEFRHPVVREVCRLITLSSAWNPNFEGRLRHLLRSLKPSLVCA 168

Query: 114 VLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIE 173
           VLRSQADERVAL FFYWADRQWRY H P+VYY +L++LSKTKLCQGA+RVLRLM RRGIE
Sbjct: 169 VLRSQADERVALNFFYWADRQWRYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIE 228

Query: 174 CRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
             PEAF  +MV+YSRAGKLRNA+ VL++MQKA V PNL ICNT I+VLV G KL KALRF
Sbjct: 229 LSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRF 288

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           LERMQ+ GI P+++TYN LIKGYCDL+RI+DA++LI  +P KGC PDKVSYYTVMG+LCK
Sbjct: 289 LERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCK 348

Query: 294 EKRIKEVRDLMEKMVNDSNLFHDQ------------------------------------ 317
           EK+I++V+ LMEKMV DSNL  DQ                                    
Sbjct: 349 EKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKV 408

Query: 318 ------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                       GR++EAK LV  M    C PDVVTYTA+V+GFCR+G +D+AKKMLQQM
Sbjct: 409 GYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQM 468

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
           Y HGCKPNTVSYTA LNGLCH+GKSLEAREMIN SEE WWTPNAITY VVMHG RREGKL
Sbjct: 469 YKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKL 528

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
           SEACD+ REMV+KGFFPTPVEINLLIQSLC+  K+  AKK+++ECLNKGCA+NVVNFT++
Sbjct: 529 SEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTV 588

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I GFCQ GD+E ALS+L+DMYL  K PD VTYT + DAL K GR++EA EL++KMLSKGL
Sbjct: 589 IHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGL 648

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
            PT VT+R+VIHRYCQ GRV+D+L LL++M+ ++  RT YN VIE LC FG LEEA K+L
Sbjct: 649 DPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFRTIYNHVIEKLCDFGNLEEAEKLL 708

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
           GKVLRTASK DA+TCHVL+ES L KG+ L AYKVAC+MF RNL PDLKLC+KV+++L+L+
Sbjct: 709 GKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLD 768

Query: 666 GKSEEADTLMLRFVERGHIQPK 687
           G   EAD LMLRFVERG IQ K
Sbjct: 769 GNLVEADKLMLRFVERG-IQQK 789


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  929 bits (2400), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/699 (63%), Positives = 542/699 (77%), Gaps = 49/699 (7%)

Query: 40  GSDSDDHFMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGEL 99
           G + DD F VL S  K   +RE++ R  +EEDE RHPLVRE+ RLI LRS+W+PK EG++
Sbjct: 109 GDECDDDFAVLKSVGKIPQSREDVGRFDVEEDESRHPLVREIGRLIGLRSSWNPKHEGQM 168

Query: 100 RNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQG 159
           RNLLRSLKP Q+CAVLRSQ DERVAL+FFYWADRQWRYRHDP+VYY MLE+LSKTK+CQG
Sbjct: 169 RNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKMCQG 228

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+RVL LM RRGI   PEAF  +MV+YSRAG+LR+A+ VL++MQ+A V PNLLICNT I 
Sbjct: 229 ARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTID 288

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
           V V  N+L KALRFLERMQ+ GI PNV+TYNC+I+GYCDLHR+++AI+L+D+MP KGC P
Sbjct: 289 VFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLP 348

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ---------------------- 317
           DKVSYYT+MGYLCKEKRI EVRDLM+KM  +  L  DQ                      
Sbjct: 349 DKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWF 408

Query: 318 --------------------------GRIEEAKELVNQMSQMG-CIPDVVTYTAVVNGFC 350
                                     GR+ EAK+L+N+M   G C PDVVTYTAVVNGFC
Sbjct: 409 LKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFC 468

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           R+GE+D+AKK+LQ M+ HG KPNTVSYTA LNGLC  GKSLEAREM+N SEE+WW+PN+I
Sbjct: 469 RLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSI 528

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TYSV+MHGLR+EGKLSEACDVVREMV KGFFP PVEINLL+QSLCR+G+   A+KFM+EC
Sbjct: 529 TYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEEC 588

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           LNKGCA+NVVNFT++I GFCQ  +L+ ALS+LDDMYL  K  D  TYTT++DAL K GR+
Sbjct: 589 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRI 648

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIE 590
            EATELM KML KG+ PT VTYRTVIHRYCQ+ +V+DL+ +LEKM+ +QKC+T YNQVIE
Sbjct: 649 AEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKTIYNQVIE 708

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC  G LEEA K+LGKVLRTAS++DA TC+ L+E YL  G+PLLAYKVACRMFNRNLIP
Sbjct: 709 KLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGVPLLAYKVACRMFNRNLIP 768

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
           D+K+C+K+S+RL++EG   + + L+   +   ++Q  SE
Sbjct: 769 DVKMCEKLSKRLVVEGAGNDNNMLLYFSLVSDNLQIPSE 807


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  924 bits (2389), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/743 (62%), Positives = 562/743 (75%), Gaps = 53/743 (7%)

Query: 4   QDSSDLSLFGSDNAEFDKSEKCDFDIFAEEVEEGEDGSDSDDHFMVLDSFDKYRVNRE-- 61
           +D+ D S FGS + E  K     F    E  E  ++  +  D     D       NR+  
Sbjct: 104 EDTGDSSFFGSPSEEHGKERHFKFGDDIEAEESNDEEEEDGDLGDAADLLGSNLSNRDPG 163

Query: 62  ---EIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQ 118
              + ++V + ED FRH LVR+ C+LI+L S+W+ K EGELR L+RSL P Q+CAVL SQ
Sbjct: 164 QGNDCKKVEIGEDVFRHSLVRDTCKLIQLSSSWNRKFEGELRYLVRSLNPLQVCAVLLSQ 223

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            DER AL+FFYWADR WRYRHD  VY +MLEILSKTKLCQGAKR+LRLM RR I+  PEA
Sbjct: 224 EDERNALRFFYWADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEA 283

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F ++MV+YSRAG+LR+AM VL++MQKA V PNL ICNTAIH+LV+GN+L KALRF ERM 
Sbjct: 284 FGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMV 343

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
           L GI PNV+TYNCLIKGYC++H++  A++LID+MP KGCSPDKVSYYTVMG LC++KR+ 
Sbjct: 344 LIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLN 403

Query: 299 EVRDLMEKMVNDSNLFHD------------------------------------------ 316
           E+R+L++KM  DS L  D                                          
Sbjct: 404 EIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAI 463

Query: 317 ------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                 +G+I++AKELV++M   GC PDVVTYT+V++GFCR+G+LDQAKKM+QQMY H C
Sbjct: 464 VHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHC 523

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           KPN V+YT FLNGLC NGKSLEAR+M+N SEEEWWTPNAITYSVV+HGLRREGKL+EACD
Sbjct: 524 KPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACD 583

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           VVREM+ KGFFP PVEINLL+ SLCR+GK   A + ++EC+NKGCAVNVVNFT++I GFC
Sbjct: 584 VVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFC 643

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           QK DLE ALSLLDDMYLC K PDTVTYT +IDAL+K  R+EEATEL MKML +GLVP+ V
Sbjct: 644 QKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPV 703

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           TYR+VIH+YC+ GRVEDLLKLL+KML K + +TAYN VIE LC FGYLEEA  +LG+VLR
Sbjct: 704 TYRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLR 763

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
           TAS+ DA TCHVL+ESYLN GIP+ AYKVACRMFNRNLIPDLKLC+KVS+RL++EGK EE
Sbjct: 764 TASRTDAKTCHVLMESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEE 823

Query: 671 ADTLMLRFVERGHIQPKSEEHLQ 693
           AD L+LRFVERGH+  +  +HL 
Sbjct: 824 ADRLVLRFVERGHVSAQEPKHLH 846


>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
 gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score =  745 bits (1924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/676 (55%), Positives = 488/676 (72%), Gaps = 54/676 (7%)

Query: 68  LEED---EFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVA 124
           LE+D   E R  LVR+ CRL+ELR +WS KLE +LR+LLR++ P Q+ AVLR+QA     
Sbjct: 48  LEDDLAEELRSRLVRDTCRLLELRDSWSAKLEAQLRHLLRAMTPSQVRAVLRAQAQRDAR 107

Query: 125 --LQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYL 182
              +FF WADRQW+YRH P V+  ML +LS+T+L   A+RV+RLM RRG+      F++L
Sbjct: 108 AAFEFFRWADRQWKYRHAPEVFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHL 167

Query: 183 MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
           M++YSRAGKLR+AM VL +MQK   AP++ ICN A++VLVV  ++ KAL F ERM+  G+
Sbjct: 168 MLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGV 227

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
            P+V+TYNCLIKG C   RI DA+++I  M   GC PDK+SY+TVM +LCKEKR+ +V++
Sbjct: 228 DPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQN 287

Query: 303 LMEKMVNDSNLFHDQ--------------------------------------------- 317
           L+E+M +D+ +F DQ                                             
Sbjct: 288 LLERM-SDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSF 346

Query: 318 ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              GR+ EAKE++ +M   GC PDVVTY+AVV+GFCR+GELDQA+KM++ MY +GCKPNT
Sbjct: 347 CLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNT 406

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V++TA LNGLC  GKS EA E++N SEEEWWTP+AITYSVVMHG RREGKL E+CDVV +
Sbjct: 407 VTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQ 466

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M++KGFFPT VEINLLI +LC E K   AK FM++C +KGC +NVVNFT++I GF ++GD
Sbjct: 467 MLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGD 526

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           LE ALSLLDDMYL  + PD VTYT ++DAL + G+++EAT L+ KML++GL PT VTYRT
Sbjct: 527 LESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRT 586

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           VIHRYC+ G VEDLL LL+KML+K+   +AYNQVIE LC+FG L EA  +L KVLRTASK
Sbjct: 587 VIHRYCEKGAVEDLLNLLDKMLAKEGFSSAYNQVIEKLCAFGKLSEANNLLSKVLRTASK 646

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            DA TCH+L++S+LN+G+PL +Y VACRMF RNLIPDLKLC+KV  +L L G+ + A  L
Sbjct: 647 RDAQTCHILMDSFLNRGLPLQSYNVACRMFQRNLIPDLKLCQKVDSQLALAGEKQAAGKL 706

Query: 675 MLRFVERGHIQPKSEE 690
           +++FVERG      EE
Sbjct: 707 IIKFVERGVNMHNGEE 722


>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Brachypodium distachyon]
          Length = 721

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/662 (55%), Positives = 485/662 (73%), Gaps = 50/662 (7%)

Query: 71  DEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA--DERVALQFF 128
           +E R  LVR+ CRL+E R +W+PKLE +LR+LLR L P Q+ AVLR+QA  D R A +FF
Sbjct: 54  EESRSRLVRDTCRLLEQRGSWTPKLEAQLRHLLRVLSPPQVRAVLRAQAQGDARAAFEFF 113

Query: 129 YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR 188
            WADRQW+YRH P V+  ML +LS+T+L   A+RV+RLM RRG+   P  F++LM++YSR
Sbjct: 114 RWADRQWQYRHAPEVFDEMLGLLSRTRLHDPARRVVRLMIRRGVRRGPRQFAHLMLSYSR 173

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           AGKLR+AM VL +MQ    AP++ ICN A++VLVV  ++ KAL F +RM+  G+ P+V+T
Sbjct: 174 AGKLRSAMRVLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVT 233

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           YNCLIKG C + R+ +A+++I  M   GC PDK+SYYTVM +LCKEKR+ EVR L+  M 
Sbjct: 234 YNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLLATMR 293

Query: 309 NDSNLFHDQ------------------------------------------------GRI 320
           ND+ L  DQ                                                GR+
Sbjct: 294 NDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCLNGRM 353

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            EAKE+V +M    C PDVVTY+AVV+GFCR+GE+DQA+KM++ MY +GCKPN V++TA 
Sbjct: 354 AEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTAL 413

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           LNGLC  GKS EA E++N S E+WWTP+ ITYSVVMHG RREGKL E+CDVV +M++KGF
Sbjct: 414 LNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQMLQKGF 473

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
           FPT VEINLLI +LC+EGK   AK+FM++C +KGC +NVVNFT++I GF ++GDLE ALS
Sbjct: 474 FPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALS 533

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           LLDD+YL  + PD VTYT +++AL + GR++EAT L+ KML++GLVPT+VTYRTVIHRYC
Sbjct: 534 LLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRYC 593

Query: 561 QVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           + G VE+L+ LL+KML++Q+ ++ YNQVIE LC+FG L EA  +L KVLRTAS+ DA TC
Sbjct: 594 EKGTVEELVDLLDKMLARQELKSVYNQVIEKLCAFGKLNEAYGLLSKVLRTASQRDAQTC 653

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
           H+L+ES+LN+G+ + AY VACRMF RNLIPDLKLC+KV +RL+LE + + A  L+++FVE
Sbjct: 654 HILMESFLNRGLTIQAYNVACRMFQRNLIPDLKLCQKVDDRLVLEERKQAAGKLIVKFVE 713

Query: 681 RG 682
           RG
Sbjct: 714 RG 715



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/453 (22%), Positives = 198/453 (43%), Gaps = 46/453 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMAR-RGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           D I YY ++  L K K     + +L  M    G+      ++ L+   ++ G    A+  
Sbjct: 265 DKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEF 324

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L   +      + +  +  +H   +  ++A+A   +  M      P+V+TY+ ++ G+C 
Sbjct: 325 LRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCR 384

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND----SNL- 313
           +  I  A K++  M   GC P+ V++  ++  LCK  +  E  +L+ K   D    S++ 
Sbjct: 385 IGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDIT 444

Query: 314 -------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                  F  +G+++E+ ++V QM Q G  P  V    +++  C+ G+  +AK+ ++Q  
Sbjct: 445 YSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQ 504

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             GC  N V++T  ++G    G    A  +++        P+ +TY+VV++ L R+G+L 
Sbjct: 505 SKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLK 564

Query: 427 EACDVVREMVKKGFFPTPVEI---------------------------------NLLIQS 453
           EA  +V +M+ +G  PT V                                   N +I+ 
Sbjct: 565 EATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDLLDKMLARQELKSVYNQVIEK 624

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           LC  GK++ A   + + L      +      L+  F  +G   +A ++   M+     PD
Sbjct: 625 LCAFGKLNEAYGLLSKVLRTASQRDAQTCHILMESFLNRGLTIQAYNVACRMFQRNLIPD 684

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
                 + D L    R + A +L++K + +GL+
Sbjct: 685 LKLCQKVDDRLVLEERKQAAGKLIVKFVERGLL 717


>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 726

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/662 (56%), Positives = 478/662 (72%), Gaps = 50/662 (7%)

Query: 71  DEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA--DERVALQFF 128
           +E R  LVR+ CRL+ELR +WSPKLE +LR+LLR L P Q+ AVLR+QA  D R A +FF
Sbjct: 55  EESRSRLVRDTCRLLELRESWSPKLEAQLRHLLRVLSPPQVRAVLRAQARGDVRRAFEFF 114

Query: 129 YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR 188
            WADRQWRYRH P V+  ML +LS T+L   A+RV+RLM RRG+    E F+ LM++YSR
Sbjct: 115 RWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSR 174

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           AGKLR+AM VL +MQK   AP++ ICN A++VLVV  ++ KAL F ERM+  G+ P+V T
Sbjct: 175 AGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYT 234

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           YNCLIKG C   R+ DA+++I  M   GC PDK+SYYTVM +LCKEKR++EVR L+++M 
Sbjct: 235 YNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMR 294

Query: 309 NDSNLFHDQ------------------------------------------------GRI 320
           ND+ LF DQ                                                GR+
Sbjct: 295 NDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRM 354

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            EAKE+V +M   GC PDVVTY+ VV+GFCR+GELDQA+KM++ MY + CKPNTV++TA 
Sbjct: 355 AEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTAL 414

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           LNGLC  GK+ EA E++N SEEEWWTP+ ITYSVVMHG RREGKL E+CDVV +M++KGF
Sbjct: 415 LNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGF 474

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
           FPT VEINLLI +LC++ K   AK FM++C +KGC +NVVNFT++I GF ++GDLE ALS
Sbjct: 475 FPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALS 534

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L+DDMYL  + PD VTYT ++DAL K GR++EAT L+ KML++G++PT VTYRTVIHRYC
Sbjct: 535 LMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYC 594

Query: 561 QVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           + G +EDLL LLEKML++Q+ ++AYNQV+E LC+FG L EA  +L K+LRTAS  DA TC
Sbjct: 595 EKGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTC 654

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
           H+L+ES+LN+G+ L AY VACRMF RNLIPD+KLC+KV  +L  E        LM++F E
Sbjct: 655 HILMESFLNRGLGLQAYNVACRMFRRNLIPDVKLCQKVDNQLASEKNKPVPGKLMVKFAE 714

Query: 681 RG 682
           RG
Sbjct: 715 RG 716


>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
          Length = 726

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/662 (56%), Positives = 477/662 (72%), Gaps = 50/662 (7%)

Query: 71  DEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA--DERVALQFF 128
           +E R  LVR+ CRL+ELR +WSPKLE +LR LLR L P Q+ AVLR+QA  D R A +FF
Sbjct: 55  EESRSRLVRDTCRLLELRESWSPKLEAQLRQLLRVLSPPQVRAVLRAQARGDVRRAFEFF 114

Query: 129 YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR 188
            WADRQWRYRH P V+  ML +LS T+L   A+RV+RLM RRG+    E F+ LM++YSR
Sbjct: 115 RWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSR 174

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           AGKLR+AM VL +MQK   AP++ ICN A++VLVV  ++ KAL F ERM+  G+ P+V T
Sbjct: 175 AGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYT 234

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           YNCLIKG C   R+ DA+++I  M   GC PDK+SYYTVM +LCKEKR++EVR L+++M 
Sbjct: 235 YNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMR 294

Query: 309 NDSNLFHDQ------------------------------------------------GRI 320
           ND+ LF DQ                                                GR+
Sbjct: 295 NDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRM 354

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            EAKE+V +M   GC PDVVTY+ VV+GFCR+GELDQA+KM++ MY + CKPNTV++TA 
Sbjct: 355 AEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTAL 414

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           LNGLC  GK+ EA E++N SEEEWWTP+ ITYSVVMHG RREGKL E+CDVV +M++KGF
Sbjct: 415 LNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGF 474

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
           FPT VEINLLI +LC++ K   AK FM++C +KGC +NVVNFT++I GF ++GDLE ALS
Sbjct: 475 FPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALS 534

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L+DDMYL  + PD VTYT ++DAL K GR++EAT L+ KML++G++PT VTYRTVIHRYC
Sbjct: 535 LMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYC 594

Query: 561 QVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           + G +EDLL LLEKML++Q+ ++AYNQV+E LC+FG L EA  +L K+LRTAS  DA TC
Sbjct: 595 EKGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTC 654

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
           H+L+ES+LN+G+ L AY VACRMF RNLIPD+KLC+KV  +L  E        LM++F E
Sbjct: 655 HILMESFLNRGLGLQAYNVACRMFRRNLIPDVKLCQKVDNQLASEKNKPVPGKLMVKFAE 714

Query: 681 RG 682
           RG
Sbjct: 715 RG 716


>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
          Length = 709

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/653 (56%), Positives = 472/653 (72%), Gaps = 50/653 (7%)

Query: 72  EFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVA--LQFFY 129
           E R  LVR+ CRL+ELR +WS KLE +LR+ LR+L P Q+ AVLR+QA        +FF 
Sbjct: 57  ELRSHLVRDTCRLLELRDSWSAKLEAQLRHFLRALTPSQVRAVLRAQAQRDARAAFEFFR 116

Query: 130 WADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           WADRQW+YRH P V+  ML +LS+T+L   A+RV+RLM RRGI      F++LM++YSRA
Sbjct: 117 WADRQWKYRHAPEVFDEMLALLSRTRLHDPARRVVRLMIRRGIRRGTRQFAHLMLSYSRA 176

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GKLR+AM VL +MQK   AP++ ICN A++VLVV  ++ KAL F ERM+  G+ P+V+TY
Sbjct: 177 GKLRSAMRVLQLMQKDGCAPDICICNVAVNVLVVAGRVDKALEFAERMRRVGVDPDVVTY 236

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           NCLIKG C   RI +A+++I  M   GC PDK+SY+TVM +LCKEKR+ EV +L+E+M N
Sbjct: 237 NCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRVAEVWNLLERMRN 296

Query: 310 DSNLFHDQ------------------------------------------------GRIE 321
           D+ +F DQ                                                GR+ 
Sbjct: 297 DAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHSFCLNGRMS 356

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EAKE++ +M   GC PDVVTY+AVV+GFCR+GELDQA+KM++ MY +GCKPNTV++TA L
Sbjct: 357 EAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALL 416

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           NGLC  GKS EA E++N SEEEWWTP+ ITYSV+MHG RREGKL E+CDVV +M++KGFF
Sbjct: 417 NGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQKGFF 476

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           PT VEINLLI +LC+E K   AK FM++C +KGC +NVVNFT++I GF ++GDLE ALSL
Sbjct: 477 PTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSL 536

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           LDDMYL  + PD VTYT ++DAL + G+++EAT L+ KML++GL+PT VTYRTVIHRYC+
Sbjct: 537 LDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIHRYCE 596

Query: 562 VGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
            G VEDLL LL+KML+KQ   +AYNQVIE LC+FG L EA  +L KVLR+ASK DA TCH
Sbjct: 597 KGAVEDLLNLLDKMLTKQGFSSAYNQVIEKLCAFGKLSEAYNLLSKVLRSASKRDAQTCH 656

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
           +L++S+LN+G+PL +Y VACRMF RNLIPDLKLC+KV  +L L G+   A  L
Sbjct: 657 ILMDSFLNRGLPLQSYNVACRMFQRNLIPDLKLCQKVDSQLALVGERHAAGKL 709



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 188/368 (51%), Gaps = 3/368 (0%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR+++A E   +M ++G  PDVVTY  ++ G C    + +A +M+  M  +GC P+ +SY
Sbjct: 212 GRVDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISY 271

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWT-PNAITYSVVMHGLRREGKLSEACDVVREMV 436
              ++ LC   +  E   ++     +    P+ ITY++++HGL + G   EA   +RE  
Sbjct: 272 FTVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESE 331

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            K F    V  + ++ S C  G+M  AK+ + E ++KGC  +VV +++++ GFC+ G+L+
Sbjct: 332 GKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELD 391

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +A  ++  MY     P+TVT+T +++ L K G+  EA EL+ K   +   P+ +TY  ++
Sbjct: 392 QARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIM 451

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASK 614
           H + + G++ +   ++ +ML K    TA   N +I  LC       A   + +       
Sbjct: 452 HGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCF 511

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            +      ++  +  +G    A  +   M+  N  PD+     V + L  +GK +EA  L
Sbjct: 512 INVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATAL 571

Query: 675 MLRFVERG 682
           + + + RG
Sbjct: 572 VEKMLNRG 579



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 116/264 (43%), Gaps = 4/264 (1%)

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           VVR M+++G      +   L+ S  R GK+  A + +Q     GCA ++      +    
Sbjct: 150 VVRLMIRRGIRRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNVAVNVLV 209

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
             G +++AL   + M     DPD VTY  +I  L    R+ EA E++  ML  G  P  +
Sbjct: 210 VAGRVDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKI 269

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGK 607
           +Y TV+   C+  RV ++  LLE+M +       +  YN +I  L   G+ +EA   L +
Sbjct: 270 SYFTVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRE 329

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
                 + D      +V S+   G    A ++   M ++   PD+     V +     G+
Sbjct: 330 SEGKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGE 389

Query: 668 SEEADTLMLRFVERGHIQPKSEEH 691
            ++A  +M    + G  +P +  H
Sbjct: 390 LDQARKMMKHMYKNG-CKPNTVTH 412


>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
          Length = 693

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/661 (54%), Positives = 455/661 (68%), Gaps = 86/661 (13%)

Query: 72  EFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA--DERVALQFFY 129
           E R  LVR+ CRL+ELR +WSPKLE +LR+LLR L P Q+ AVLR+QA  D R A +FF 
Sbjct: 59  ESRSRLVRDTCRLLELRESWSPKLEAQLRHLLRVLSPPQVRAVLRAQARGDVRRAFEFFR 118

Query: 130 WADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           WADRQWRYRH P                                     F+ LM++YSRA
Sbjct: 119 WADRQWRYRHAP------------------------------------EFAQLMLSYSRA 142

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GKLR+AM VL +MQK   AP++ ICN A++VLVV  ++ KAL F ERM+  G+ P+V TY
Sbjct: 143 GKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTY 202

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           NCLIKG C   R+ DA+++I  M   GC PDK+SYYTVM +LCKEKR++EVR L+++M N
Sbjct: 203 NCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRN 262

Query: 310 DSNLFHDQ------------------------------------------------GRIE 321
           D+ LF DQ                                                GR+ 
Sbjct: 263 DAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMA 322

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EAKE+V +M   GC PDVVTY+ VV+GFCR+GELDQA+KM++ MY + CKPNTV++TA L
Sbjct: 323 EAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALL 382

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           NGLC  GK+ EA E++N SEEEWWTP+ ITYSVVMHG RREGKL E+CDVV +M++KGFF
Sbjct: 383 NGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFF 442

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           PT VEINLLI +LC++GK   AK FM++C +KGC +NVVNFT++I GF ++GDLE ALSL
Sbjct: 443 PTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSL 502

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           +DDMYL  + PD VTYT ++DAL K GR++EAT L+ KML++GL+PT VTYRTVIHRYC+
Sbjct: 503 MDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCE 562

Query: 562 VGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
            G +EDLL LLEKML++Q+ ++AYNQV+E LC+FG L EA  +L K+LRTAS  DA TCH
Sbjct: 563 KGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCH 622

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
           +L+ES+LN+G+ L AY VACRMF RNLIPD+KLC+KV  +L  E        LM++F ER
Sbjct: 623 ILMESFLNRGLGLQAYNVACRMFRRNLIPDVKLCQKVDNQLASEKNKPVPGKLMVKFAER 682

Query: 682 G 682
           G
Sbjct: 683 G 683


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 175/644 (27%), Positives = 302/644 (46%), Gaps = 87/644 (13%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
           +D   AL+FF+WA +Q  + H+   Y  + E L + +       +L+     GI   P  
Sbjct: 2   SDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGIT--PNV 59

Query: 179 FSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG------------ 224
           F+Y +V     ++G L  A  +L  M+++   P+  I N  IH L               
Sbjct: 60  FTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRS 119

Query: 225 --------------------NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
                               N+L +A  +  +M+  G  PN  TYN LI G+C +H++  
Sbjct: 120 MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 179

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH------ 315
           A  L+ EM   G +P+ V+Y TV+   C++ ++     L  +MV +    NL        
Sbjct: 180 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 239

Query: 316 ---DQGRIEEAKELVNQMSQMG-----------------------------------CIP 337
                G ++EA EL+++M + G                                   C P
Sbjct: 240 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 299

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           DVV Y+ ++ G C+ G LD+A K+ ++M  + C+P+ V++TA ++GLC   +  EA++++
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 359

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
            T E+   TPN ITYS ++ GL + G++ +A +V + M+ +G  P  V  N LI   C  
Sbjct: 360 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 419

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
             +D A   M+E    GC  +++ + +LI G C+ G   EA  L  DM     +PD +TY
Sbjct: 420 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 479

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           + +I    K  R++ A  L   ML + ++P VVT+ T++  YC  G V+D  +LLE+M++
Sbjct: 480 SCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVA 539

Query: 578 KQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
              C      Y  +++  C  G + EA ++L ++ +   + +  T   L++++   G P 
Sbjct: 540 SD-CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPT 598

Query: 635 LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           +AY++   M    + P++   + +       G  EEA  ++ R 
Sbjct: 599 VAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERL 642



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 277/555 (49%), Gaps = 28/555 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  ++    +      A ++ R M   G  C P   +Y  L+    R G +  A  +L
Sbjct: 197 VTYSTVIHGFCRQTKVDTAYKLFRQMVENG--CMPNLVTYNTLLSGLCRNGLMDEAYELL 254

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++  + P+    +T +  L    K+  AL+  E        P+V+ Y+ LI G C  
Sbjct: 255 DEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKA 314

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VND 310
            R+ +A KL ++M    C PD V++  +M  LCK  R++E + ++E M         +  
Sbjct: 315 GRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 374

Query: 311 SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           S+L       G++ +A+E+  +M   G  P+VVTY ++++GFC    +D A  ++++M  
Sbjct: 375 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 434

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+ ++Y   ++GLC  G++ EA  +    + ++  P+ ITYS ++ G  +  ++  
Sbjct: 435 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDM 494

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +  +M+K+   P  V  + L++  C  G +D A++ ++E +   C+ +V  +TSL+ 
Sbjct: 495 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 554

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC+ G + EA  +L  M      P+ VTYT +IDA  + G+   A  L+ +M+  G+ P
Sbjct: 555 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQP 614

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKI 604
            V+TYR++I  +C  G +E+  K+LE++   + C+    AY  +++ LC  G +  A ++
Sbjct: 615 NVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALEL 674

Query: 605 LGKVLRTASKADASTCHVLVESY-----LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           L  + ++ +         L+        L K + +L         +R   P+ +  + V 
Sbjct: 675 LEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMT----LSRKSRPNAEAYEAVI 730

Query: 660 ERLILEGKSEEADTL 674
           + L  EG+ EEA+ L
Sbjct: 731 QELAREGRHEEANAL 745



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 228/478 (47%), Gaps = 35/478 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
           D + Y  ++  L K      A ++   M  R   C P+   F+ LM    +  +L+ A  
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACKLFEKM--RENSCEPDVVTFTALMDGLCKGDRLQEAQQ 357

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL  M+     PN++  ++ I  L    ++  A    +RM + GI PNV+TYN LI G+C
Sbjct: 358 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 417

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
             + +  A+ L++EM   GC PD ++Y T++  LCK                        
Sbjct: 418 MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCK-----------------------T 454

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR  EA  L   M    C PDV+TY+ ++ GFC++  +D A+ +   M      P+ V++
Sbjct: 455 GRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTF 514

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +  + G C+ G   +A  ++        +P+  TY+ ++ G  + G++ EA  V++ M K
Sbjct: 515 STLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK 574

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P  V    LI + CR GK   A + ++E +  G   NV+ + SLI GFC  GDLEE
Sbjct: 575 RGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEE 634

Query: 498 ALSLLDDMYL---CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           A  +L+ +     CK D     Y  ++D L + GR+  A EL+  +   G  P    Y  
Sbjct: 635 ARKILERLERDENCKAD--MFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVA 692

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVL 609
           +I   CQ   +   +++LE+M   +K R    AY  VI+ L   G  EEA  +  ++L
Sbjct: 693 LIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 750


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 184/596 (30%), Positives = 299/596 (50%), Gaps = 15/596 (2%)

Query: 102 LLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAK 161
           L ++  P+Q+   LR Q+DE   L    WA +Q  +    ++Y  +L  L K       +
Sbjct: 66  LPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMR 125

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA-AVAPNLLICNTAIHV 220
           RVL+ M   G E R   F  L+ +Y++      A+ V+ +M++   +  +    N  ++V
Sbjct: 126 RVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNV 185

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
           LV GNKL        RM   GI P+V T+N LIK  C  H+I+ AI +++EM   G SPD
Sbjct: 186 LVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPD 245

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVN----DSN-----LFHD---QGRIEEAKELVN 328
           + ++ T+M    +E  +     + E+MV      SN     L H    +GRIEE    ++
Sbjct: 246 EKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFID 305

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +MS  G  PD  T+ ++VNG CR+G +  A ++L  M   G  P+  +Y + + GLC  G
Sbjct: 306 EMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLG 365

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EA E++N      ++PN +TY+ ++  L +E ++ EA ++ R +  KG  P     N
Sbjct: 366 EVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 425

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            LIQ LC       A +  +E   KGC  +   +  LI   C +G LEEALSLL +M   
Sbjct: 426 SLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESS 485

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
               + VTY T+ID   KN R+EEA E+  +M  +G+   VVTY T+I   C+  RVE+ 
Sbjct: 486 GCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEA 545

Query: 569 LKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            +L+++ML +  +  +  YN ++   C  G +++A  I+  +     + D+ T   L+  
Sbjct: 546 AQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILG 605

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
               G   LA ++   +  + ++   +    V + L  E ++ EA  L    +E+G
Sbjct: 606 LSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKG 661



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 230/478 (48%), Gaps = 28/478 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           +R D   +  ++  L +    + A  +L +M + G +  P+ F+Y  L+    + G++  
Sbjct: 312 FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFD--PDIFTYNSLIFGLCKLGEVEE 369

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +L+ M     +PN +  NT I  L   N++ +A      +   GI P+V T+N LI+
Sbjct: 370 AVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 429

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G C  +  + A++L +EM  KGC PD+ +Y  ++  LC                      
Sbjct: 430 GLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCS--------------------- 468

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             +GR+EEA  L+ +M   GC  +VVTY  +++GFC+   +++A+++  +M   G   N 
Sbjct: 469 --RGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNV 526

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y   ++GLC N +  EA ++++    E   P+  TY+ ++    R G + +A D+V+ 
Sbjct: 527 VTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQT 586

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M   G  P  V    LI  L + G+++ A + ++    KG  +    +  +I+   ++  
Sbjct: 587 MTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKR 646

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDAL-SKNGRVEEATELMMKMLSKGLVPTVVTYR 553
             EA+ L  +M      PD VTY  +   L S  G + EA + +++M  KG +P   ++ 
Sbjct: 647 TSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFL 706

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            +    C +   + L+KL+ +++ +     +   +I         ++A   LG++L +
Sbjct: 707 MLAEGLCALSMEDTLIKLVNRVMKQANFSDSEVSMIMGFLKIRKFQDALATLGRILSS 764


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 158/540 (29%), Positives = 274/540 (50%), Gaps = 27/540 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I + +M++ L K      A      M ++G       ++ L+  + +  K+  A  +L  
Sbjct: 8   ITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKE 67

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+++ +APN++  +T IH      K+  A +   +M   G  PN++TYN L+ G C    
Sbjct: 68  MKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 127

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A +L+DEM  +G  PDK SY T+M  LCK                        G+I+
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCK-----------------------TGKID 164

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A ++    S   C PDVV Y+ ++ G C+ G LD+A K+ ++M  + C+P+ V++TA +
Sbjct: 165 MALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALM 224

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +GLC   +  EA++++ T E+   TPN ITYS ++ GL + G++ +A +V + M+ +G  
Sbjct: 225 DGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE 284

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N LI   C    +D A   M+E    GC  +++ + +LI G C+ G   EA  L
Sbjct: 285 PNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL 344

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
             DM     +PD +TY+ +I    K  R++ A  L   ML + ++P VVT+ T++  YC 
Sbjct: 345 FGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCN 404

Query: 562 VGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
            G V+D  +LLE+M++   C      Y  +++  C  G + EA ++L ++ +   + +  
Sbjct: 405 AGLVDDAERLLEEMVASD-CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV 463

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           T   L++++   G P +AYK+   M    + P++   + +       G  EEA  ++ R 
Sbjct: 464 TYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERL 523



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  ++    +      A ++ R M   G  C P   +Y  L+    R G +  A  +L
Sbjct: 78  VTYSTVIHGFCRQTKVDTAYKLFRQMVENG--CMPNLVTYNTLLSGLCRNGLMDEAYELL 135

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++  + P+    +T +  L    K+  AL+  E        P+V+ Y+ LI G C  
Sbjct: 136 DEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKT 195

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VND 310
            R+ +A KL ++M    C PD V++  +M  LCK  R++E + ++E M         +  
Sbjct: 196 GRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 255

Query: 311 SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           S+L       G++ +A+E+  +M   G  P+VVTY ++++GFC    +D A  ++++M  
Sbjct: 256 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 315

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+ ++Y   ++GLC  G++ EA  +    + ++  P+ ITYS ++ G  +  ++  
Sbjct: 316 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDM 375

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +  +M+K+   P  V  + L++  C  G +D A++ ++E +   C+ +V  +TSL+ 
Sbjct: 376 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 435

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC+ G + EA  +L  M      P+ VTYT +IDA  + G+   A +L+ +M+  G+ P
Sbjct: 436 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQP 495

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKI 604
            V+TYR++I  +C  G +E+  K+LE++   + C+    AY  +++ LC  G +  A ++
Sbjct: 496 NVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALEL 555

Query: 605 LGKVLRTASKADASTCHVLVESY-----LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           L  + ++ +         L+        L K + +L         +R   P+ +  + V 
Sbjct: 556 LEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMT----LSRKSRPNAEAYEAVI 611

Query: 660 ERLILEGKSEEADTL 674
           + L  EG+ EEA+ L
Sbjct: 612 QELAREGRHEEANAL 626



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 144/478 (30%), Positives = 229/478 (47%), Gaps = 35/478 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
           D + Y  ++  L KT     A ++   M  R   C P+   F+ LM    +  +L+ A  
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKM--RENSCEPDVVTFTALMDGLCKGDRLQEAQQ 238

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL  M+     PN++  ++ I  L    ++  A    +RM + GI PNV+TYN LI G+C
Sbjct: 239 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 298

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
             + +  A+ L++EM   GC PD ++Y T++  LCK                        
Sbjct: 299 MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCK-----------------------T 335

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR  EA  L   M    C PDV+TY+ ++ GFC++  +D A+ +   M      P+ V++
Sbjct: 336 GRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTF 395

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +  + G C+ G   +A  ++        +P+  TY+ ++ G  + G++ EA  V++ M K
Sbjct: 396 STLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK 455

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P  V    LI + CR GK   A K ++E +  G   NV+ + SLI GFC  GDLEE
Sbjct: 456 RGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEE 515

Query: 498 ALSLLDDMYL---CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           A  +L+ +     CK D     Y  ++D L + GR+  A EL+  +   G  P    Y  
Sbjct: 516 ARKMLERLERDENCKAD--MFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVA 573

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVL 609
           +I   CQ   +   +++LE+M   +K R    AY  VI+ L   G  EEA  +  ++L
Sbjct: 574 LIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 631



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 227/480 (47%), Gaps = 63/480 (13%)

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           NV+T+  +I G C  +R+ +A     +M  KG  P++ +Y  ++   CK           
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCK----------- 54

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                     H   ++  A  L+ +M + G  P+VVTY+ V++GFCR  ++D A K+ +Q
Sbjct: 55  ---------VH---KVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQ 102

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M  +GC PN V+Y   L+GLC NG   EA E+++   E    P+  +Y  +M GL + GK
Sbjct: 103 MVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGK 162

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           +  A  V  +       P  V  + LI  LC+ G++D A K  ++     C  +VV FT+
Sbjct: 163 IDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTA 222

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L+ G C+   L+EA  +L+ M      P+ +TY+++ID L K G+V +A E+  +M+ +G
Sbjct: 223 LMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 282

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEA 601
           + P VVTY ++IH +C    V+  L L+E+M +   C      YN +I+ LC  G   EA
Sbjct: 283 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEM-TATGCLPDIITYNTLIDGLCKTGRAPEA 341

Query: 602 GKILG-----------------------------------KVLRTASKADASTCHVLVES 626
            ++ G                                    +L+ A   D  T   LVE 
Sbjct: 342 NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEG 401

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           Y N G+   A ++   M   +  PD+     + +     G+  EA  ++ R  +RG  QP
Sbjct: 402 YCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG-CQP 460


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 163/539 (30%), Positives = 274/539 (50%), Gaps = 11/539 (2%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR 162
           L  LK  ++   L+++ +  +AL FF        ++H P+ Y  M++ L   +   G + 
Sbjct: 35  LNLLKESEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQY 94

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           +L+LM   GI C  + F  ++ AY RAG    A+     + +    P++ I N  +  L+
Sbjct: 95  LLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALL 154

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
             NK          M+  GI  NV TYN L+K  C   R+  A KL+ EM  KGC PD V
Sbjct: 155 SENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAV 214

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKM-----VNDS--NLFHDQGRIEEAKELVNQMSQMGC 335
           SY TV+  +C+  +++E R+L  ++     V ++  N F  + ++EE  EL N+M+  G 
Sbjct: 215 SYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGI 274

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PDV+TY+ V+N    +G ++ A  +L +M+  GC PN  ++T+ + G    G+  EA +
Sbjct: 275 DPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALD 334

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           + N   +E   PN + Y+ ++HGL   GK+ EA  V ++M + G FP     + LI    
Sbjct: 335 LWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFA 394

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + G + GA +   + +  GC  NVV +T ++   C+      AL L+++M      P+T+
Sbjct: 395 KAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTI 454

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL---L 572
           T+ T I  L  +G+ E A +++ +M   G  P V TY  V+       R  + L++   +
Sbjct: 455 TFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEI 514

Query: 573 EKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           E+M  K    T YN ++   C  G  + A +I GK+L   +K D+ T + ++ +Y  +G
Sbjct: 515 EEMEIKSNLVT-YNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQG 572



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 157/313 (50%), Gaps = 7/313 (2%)

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           +  V+N + R G  +QA K   ++   GCKP+   Y   L+ L    K      + N  +
Sbjct: 111 FVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMK 170

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
            +    N  TY++++  L +  ++  A  ++ EM  KG  P  V    ++ S+CR GK++
Sbjct: 171 RDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVE 230

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A++     L+      V  + +LI GFC++  +EE   L ++M +   DPD +TY+T+I
Sbjct: 231 EARE-----LSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVI 285

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQ 579
           + LS+ G VE A  ++ KM  +G  P V T+ +++  Y   GR+ + L L  +M+    +
Sbjct: 286 NTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSE 345

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
               AYN +I  LCS+G + EA  +  K+ R     + +T   L++ +   G  + A ++
Sbjct: 346 PNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEI 405

Query: 640 ACRMFNRNLIPDL 652
             +M     +P++
Sbjct: 406 WNKMITNGCLPNV 418



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 24/244 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +VY  M+++L +  +   A  ++  MA          F+  +     +GK   AM VL+ 
Sbjct: 419 VVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQ 478

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M++   APN+   N  +  L    +  +AL+ +  ++   I  N++TYN ++ G+C    
Sbjct: 479 MRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGM 538

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            K A+++  ++ + G  PD ++Y TV+   CK                       QG ++
Sbjct: 539 FKGALQIAGKLLVGGTKPDSITYNTVIYAYCK-----------------------QGEVK 575

Query: 322 EAKELVNQMSQMG-CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            A +LV+++++ G   PDV TYT+++ G C    +D+A   L +M + G  PN  ++ A 
Sbjct: 576 TAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNAL 635

Query: 381 LNGL 384
           + GL
Sbjct: 636 VRGL 639


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 170/604 (28%), Positives = 290/604 (48%), Gaps = 10/604 (1%)

Query: 93  PKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILS 152
           P L+ E       LK   +   L+ + D  +AL++F        ++H P+ Y MM+E L+
Sbjct: 28  PNLKAENEEKSSVLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLA 87

Query: 153 KTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
             +     + +L+ M   GI C  + F  ++ +Y RAG    A+     MQ   V P + 
Sbjct: 88  SEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVK 147

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
           I N  +  L+  N+          M+  G+ PNV TYN L+K  C  +R+  A KL+ EM
Sbjct: 148 IYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEM 207

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH-------DQGRIEEAKE 325
             KGC PD+VSY T++  LCK  ++KE R+L         +++        +   EEA +
Sbjct: 208 SSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQ 267

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+++M   G  P+V++YT ++N     G ++ +  +L +M+  GC PN  ++T+ + G  
Sbjct: 268 LLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFF 327

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G S EA +  +    E   PN + Y+ +MHGL  +  L +A  V  +M   G  P   
Sbjct: 328 LKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVR 387

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             + LI    + G +DGA +     +  GC  NVV +T ++   C+     +A  L+++M
Sbjct: 388 TYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
            +    P+TVT+ T I  L  +GRV+ A ++  +M + G  P   TY  ++    +  R 
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRF 507

Query: 566 EDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
            +   L++ M  +  +     YN +I   C  G L EA ++LGK++   +K DA T +++
Sbjct: 508 GEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIV 567

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +++Y  +G   +A ++  R+      PD+     +   +      EEA   + R +  G 
Sbjct: 568 IDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEG- 626

Query: 684 IQPK 687
           I P 
Sbjct: 627 ISPN 630



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 206/423 (48%), Gaps = 24/423 (5%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
           VY  ++  + K    + A ++L  M  +GI+    +++ ++ A S AG +  ++ VL+ M
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
                +PNL    + I    +     +AL F +RM   G+ PNV+ YN L+ G C    +
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
            DA+ + ++M + GC P+  +Y  ++    K                        G ++ 
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAK-----------------------AGDLDG 404

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A E+ N M   GC P+VV YT +V+  CR    +QA  +++ M    C PNTV++  F+ 
Sbjct: 405 ASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIK 464

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC +G+   A ++ +        PN  TY+ ++  L ++ +  EA  +V++M  +G   
Sbjct: 465 GLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIEL 524

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V  N +I   C  G +  A + + + + +G   + +    +I  +C++G +  A+ L+
Sbjct: 525 NLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLM 584

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI-HRYCQ 561
           D +   K  PD + YT++I  +  +  VEEA   + +MLS+G+ P V T+  ++ H +  
Sbjct: 585 DRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSN 644

Query: 562 VGR 564
           +G 
Sbjct: 645 MGH 647



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 15/326 (4%)

Query: 129 YWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY 186
           +W DR  R    P  + Y  ++  L   +    A  V   M   G       +S L+  Y
Sbjct: 338 FW-DRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGY 396

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
           ++AG L  A  V + M      PN++     + VL   +   +A   +E MQ+    PN 
Sbjct: 397 AKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNT 456

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           +T+N  IKG C   R+  AIK+ D+M   GC P+  +Y  ++  L K++R  E   L++ 
Sbjct: 457 VTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKD 516

Query: 307 M---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
           M         V  + + +     G + EA EL+ +M   G  PD +T   V++ +C+ G+
Sbjct: 517 MEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGK 576

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           ++ A +++ ++      P+ ++YT+ ++G+C +    EA   +     E  +PN  T++V
Sbjct: 577 VNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNV 636

Query: 415 VMHGLRREGKLSEACDVVREMVKKGF 440
           ++  L      S A   +  ++  GF
Sbjct: 637 LVRHLFSNMGHSGAVQFLDAVLGSGF 662


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 170/604 (28%), Positives = 290/604 (48%), Gaps = 10/604 (1%)

Query: 93  PKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILS 152
           P L+ E       LK   +   L+ + D  +AL++F        ++H P+ Y MM+E L+
Sbjct: 28  PNLKAENEEKSSVLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLA 87

Query: 153 KTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
             +     + +L+ M   GI C  + F  ++ +Y RAG    A+     MQ   V P + 
Sbjct: 88  SEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVK 147

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
           I N  +  L+  N+          M+  G+ PNV TYN L+K  C  +R+  A KL+ EM
Sbjct: 148 IYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEM 207

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH-------DQGRIEEAKE 325
             KGC PD+VSY T++  LCK  ++KE R+L         +++        +   EEA +
Sbjct: 208 SSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQ 267

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+++M   G  P+V++YT ++N     G ++ +  +L +M+  GC PN  ++T+ + G  
Sbjct: 268 LLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFF 327

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G S EA +  +    E   PN + Y+ +MHGL  +  L +A  V  +M   G  P   
Sbjct: 328 LKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVR 387

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             + LI    + G +DGA +     +  GC  NVV +T ++   C+     +A  L+++M
Sbjct: 388 TYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
            +    P+TVT+ T I  L  +GRV+ A ++  +M + G  P   TY  ++    +  R 
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRF 507

Query: 566 EDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
            +   L++ M  +  +     YN +I   C  G L EA ++LGK++   +K DA T +++
Sbjct: 508 GEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIV 567

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +++Y  +G   +A ++  R+      PD+     +   +      EEA   + R +  G 
Sbjct: 568 IDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEG- 626

Query: 684 IQPK 687
           I P 
Sbjct: 627 ISPN 630



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 206/423 (48%), Gaps = 24/423 (5%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
           VY  ++  + K    + A ++L  M  +GI+    +++ ++ A S AG +  ++ VL+ M
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
                +PNL    + I    +     +AL F +RM   G+ PNV+ YN L+ G C    +
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
            DA+ + ++M + GC P+  +Y  ++    K                        G ++ 
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAK-----------------------AGDLDG 404

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A E+ N M   GC P+VV YT +V+  CR    +QA  +++ M    C PNTV++  F+ 
Sbjct: 405 ASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIK 464

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC +G+   A ++ +        PN  TY+ ++  L ++ +  EA  +V++M  +G   
Sbjct: 465 GLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIEL 524

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V  N +I   C  G +  A + + + + +G   + +    +I  +C++G +  A+ L+
Sbjct: 525 NLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLM 584

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI-HRYCQ 561
           D +   K  PD + YT++I  +  +  VEEA   + +MLS+G+ P V T+  ++ H +  
Sbjct: 585 DRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSN 644

Query: 562 VGR 564
           +G 
Sbjct: 645 MGH 647



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 193/452 (42%), Gaps = 26/452 (5%)

Query: 69  EEDEFRHP-LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQIC--AVLRSQADERVAL 125
           + DE  +  L+  +C+L +++ A         R L  S  P      A++     E    
Sbjct: 213 DPDEVSYTTLISSLCKLGKVKEA---------RELAMSFTPSVPVYNALINGVCKEYTFE 263

Query: 126 QFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           + F   D       DP  I Y  ++  LS     + +  VL  M  RG       F+ L+
Sbjct: 264 EAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLI 323

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             +   G    A+     M +  V PN++  N  +H L     L  A+    +M++ G  
Sbjct: 324 KGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCC 383

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           PNV TY+ LI GY     +  A ++ + M   GC P+ V+Y  ++  LC+     +   L
Sbjct: 384 PNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCL 443

Query: 304 MEKMVNDS--------NLFH----DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           +E M  ++        N F       GR++ A ++ +QM   GC P+  TY  +++   +
Sbjct: 444 IENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLK 503

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
                +A  +++ M H G + N V+Y   + G C  G   EA E++         P+AIT
Sbjct: 504 DRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAIT 563

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
            ++V+    ++GK++ A  ++  +    + P  +    LI  +C    ++ A  +++  L
Sbjct: 564 VNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRML 623

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
           ++G + NV  +  L+R          A+  LD
Sbjct: 624 SEGISPNVATWNVLVRHLFSNMGHSGAVQFLD 655


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 158/523 (30%), Positives = 268/523 (51%), Gaps = 27/523 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R+G++        ++     AG+  +A+     M K    P+ +  NT I+ L   ++
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTC-PPDSVTYNTMINGLSKSDR 59

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L  A+R LE M   G  PNV +YN ++ G+C  +R+++A+ L+++M ++GC PD VSY T
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           V+  LCK  ++ E   +M+KM+                       Q GC P+V+TY  +V
Sbjct: 120 VINGLCKLDQVDEACRVMDKMI-----------------------QRGCQPNVITYGTLV 156

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW-W 405
           +GFCRVG+LD A +++++M   G +PN ++Y   ++GLC   K   A ++    EE    
Sbjct: 157 DGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSC 216

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+  TYS ++  L + GK+ +AC +V  MV KG  P  V  + L+  LC+ GK+D A  
Sbjct: 217 PPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATA 276

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            +Q     GC+ N+V + ++I G C+ G ++EA  LL++M      P+ VTYT ++DA  
Sbjct: 277 LLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFC 336

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--T 583
           K G+ E+A  L+  M+ KG VP + TY +++  +C+   VE   +LL  M+ K       
Sbjct: 337 KCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVV 396

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
           +YN VI  LC    + E   +L ++L      D  T + ++++        +AY++   +
Sbjct: 397 SYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI 456

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
                 P+L     +   L    + ++A+ L+     +    P
Sbjct: 457 QESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP 499



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 153/505 (30%), Positives = 263/505 (52%), Gaps = 20/505 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + Y  M+  LSK+     A R+L  M   G    P  FSY  V   + +A ++ NA++
Sbjct: 43  DSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA--PNVFSYNTVLHGFCKANRVENALW 100

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M      P+++   T I+ L   +++ +A R +++M   G  PNV+TY  L+ G+C
Sbjct: 101 LLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFC 160

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD- 316
            +  +  A++L+ +M  +G  P+ ++Y  +M  LC  +++     L ++M    +   D 
Sbjct: 161 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDV 220

Query: 317 ------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                        G++++A  LV  M   GC P+VVTY+++++G C+ G+LD+A  +LQ+
Sbjct: 221 FTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQR 280

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   GC PN V+Y   ++G C  G+  EA  ++    +    PN +TY+V++    + GK
Sbjct: 281 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 340

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             +A  +V  MV+KG+ P     N L+   C++ +++ A + +   + KGC  NVV++ +
Sbjct: 341 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 400

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +I G C+   + E + LL+ M      PD VT+ TIIDA+ K  RV+ A EL   +   G
Sbjct: 401 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 460

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEA 601
             P +VTY +++H  C+  R +    LL +M  KQ C      YN VI+ LC    ++ A
Sbjct: 461 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 520

Query: 602 GKILGKVLRTASKADASTCHVLVES 626
            K+  ++L      D  T  +++ S
Sbjct: 521 YKLFLQMLSDGLAPDDVTYSIVISS 545



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 248/489 (50%), Gaps = 51/489 (10%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRN 194
           YR + I Y  ++  L   +    A ++ + M   G  C P+ F+Y  +  S  ++GK+ +
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESG-SCPPDVFTYSTIVDSLVKSGKVDD 238

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  ++  M     +PN++  ++ +H L    KL +A   L+RM  +G +PN++TYN +I 
Sbjct: 239 ACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 298

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
           G+C L RI +A  L++EM   GC P+ V+Y  ++   CK  + ++   L+E MV      
Sbjct: 299 GHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP 358

Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                    ++F  +  +E A +L++ M Q GC+P+VV+Y  V+ G C+  ++ +   +L
Sbjct: 359 NLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLL 418

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           +QM  + C P+ V++   ++ +C   +   A E+ N  +E   TPN +TY+ ++HGL + 
Sbjct: 419 EQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKS 478

Query: 423 GKLSEACDVVREMVKK------------------------------------GFFPTPVE 446
            +  +A  ++REM +K                                    G  P  V 
Sbjct: 479 RRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVT 538

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            +++I SLC+   MD A   ++  L  G     + + +LI GFC+ G+L++AL +L  + 
Sbjct: 539 YSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLL 598

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                PD VT++  ID LSK GR+ +A EL+  ML  GLVP  VTY T++  +C   R E
Sbjct: 599 SKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTE 658

Query: 567 DLLKLLEKM 575
           D + L E M
Sbjct: 659 DAVDLFEVM 667



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 149/541 (27%), Positives = 263/541 (48%), Gaps = 55/541 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  ++  L K      A RV+  M +RG  C+P   +Y  L+  + R G L  A+ 
Sbjct: 113 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRG--CQPNVITYGTLVDGFCRVGDLDGAVE 170

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG-ITPNVLTYNCLIKGY 256
           ++  M +    PN +  N  +H L  G KL  AL+  + M+ +G   P+V TY+ ++   
Sbjct: 171 LVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSL 230

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
               ++ DA +L++ M  KGCSP+ V+Y +++  LCK  ++ E   L+++M         
Sbjct: 231 VKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNI 290

Query: 312 ---NLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
              N   D     GRI+EA  L+ +M   GC P+VVTYT +++ FC+ G+ + A  +++ 
Sbjct: 291 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 350

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G  PN  +Y + L+  C   +   A +++++  ++   PN ++Y+ V+ GL +  K
Sbjct: 351 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 410

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + E   ++ +M+     P  V  N +I ++C+  ++D A +        GC  N+V + S
Sbjct: 411 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 470

Query: 485 LIRGFCQKGDLEEALSLLDDMY------------------LCKKD--------------- 511
           L+ G C+    ++A  LL +M                   LCK                 
Sbjct: 471 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 530

Query: 512 ---PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD VTY+ +I +L K   ++EA  ++  ML  G  P  +TY T+I  +C+ G ++  
Sbjct: 531 GLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA 590

Query: 569 LKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           L++L+ +LSK        ++  I+ L   G L +AG++L  +LR     D  T + L++ 
Sbjct: 591 LEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKG 650

Query: 627 Y 627
           +
Sbjct: 651 F 651



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 236/503 (46%), Gaps = 52/503 (10%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY-- 181
           ALQ F   +       D   Y  +++ L K+     A R++  M  +G  C P   +Y  
Sbjct: 203 ALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG--CSPNVVTYSS 260

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+    +AGKL  A  +L  M ++  +PN++  NT I       ++ +A   LE M   G
Sbjct: 261 LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 320

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLID------------------------------- 270
             PNV+TY  L+  +C   + +DAI L++                               
Sbjct: 321 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 380

Query: 271 ----EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NLFHDQG 318
                M  KGC P+ VSY TV+  LCK  ++ E   L+E+M++++        N   D  
Sbjct: 381 QLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 440

Query: 319 ----RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH-HGCKPN 373
               R++ A EL N + + GC P++VTY ++V+G C+    DQA+ +L++M    GC P+
Sbjct: 441 CKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPD 500

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            ++Y   ++GLC + +   A ++      +   P+ +TYS+V+  L +   + EA +V+ 
Sbjct: 501 IITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLE 560

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            M+K GF P  +    LI   C+ G +D A + +Q  L+KG   +VV F+  I    ++G
Sbjct: 561 LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRG 620

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            L +A  LL+ M      PDTVTY T++       R E+A +L   M   G  P   TY 
Sbjct: 621 RLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYT 680

Query: 554 TVIHRYCQVGRVEDLLKLLEKML 576
           T++         +DLL  + K +
Sbjct: 681 TLVGHLVDKKSYKDLLAEVSKSM 703



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 234/466 (50%), Gaps = 34/466 (7%)

Query: 78  VREVCRLIE--LRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQW 135
           V + CRL+E  +    SP +     +LL  L     C     + DE  AL       R  
Sbjct: 236 VDDACRLVEAMVSKGCSPNVV-TYSSLLHGL-----CKA--GKLDEATAL-----LQRMT 282

Query: 136 RYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGK 191
           R    P  + Y  +++   K      A  +L  M   G  C+P   +Y  L+ A+ + GK
Sbjct: 283 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG--CQPNVVTYTVLLDAFCKCGK 340

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
             +A+ ++ +M +    PNL   N+ + +    +++ +A + L  M   G  PNV++YN 
Sbjct: 341 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 400

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK---EVRDLMEK-- 306
           +I G C   ++ + + L+++M    C PD V++ T++  +CK  R+    E+ +L+++  
Sbjct: 401 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 460

Query: 307 ----MVNDSNLFHD---QGRIEEAKELVNQMS-QMGCIPDVVTYTAVVNGFCRVGELDQA 358
               +V  ++L H      R ++A+ L+ +M+ + GC PD++TY  V++G C+   +D+A
Sbjct: 461 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 520

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            K+  QM   G  P+ V+Y+  ++ LC      EA  ++    +  + P AITY  ++ G
Sbjct: 521 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 580

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
             + G L +A ++++ ++ KG +P  V  ++ I  L + G++  A + ++  L  G   +
Sbjct: 581 FCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPD 640

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
            V + +L++GFC     E+A+ L + M  C  +PD  TYTT++  L
Sbjct: 641 TVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 4/176 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y +++  L K +    A  VL LM + G +  P A +Y  L+  + + G L  A+ 
Sbjct: 535 DDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD--PGAITYGTLIDGFCKTGNLDKALE 592

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L ++      P+++  +  I  L    +L +A   LE M  AG+ P+ +TYN L+KG+C
Sbjct: 593 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 652

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
           D  R +DA+ L + M   GC PD  +Y T++G+L  +K  K++   + K + D+  
Sbjct: 653 DASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGF 708


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 177/576 (30%), Positives = 298/576 (51%), Gaps = 33/576 (5%)

Query: 78  VREVCRLIELRSAWSPKLEGELRNLL-RSLKPRQICAVLRSQADERVALQFFYWADRQWR 136
           V  +  L+     WS  +E +L      S  PR +  V+ S  D ++AL FF WA     
Sbjct: 13  VTAILNLLHSGRPWS-AIEPDLSPFSGASTTPRIVGRVVNSLKDAKLALAFFRWAPASIP 71

Query: 137 -YRHDPIVYYMMLEILSKTKLCQGAKRVLR--LMARRGIECRPEAFSYLMV--AYSRAGK 191
            + H    +  +L++L + K  + A  + R  L+A     C P+  SY +V   +  AG 
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLA----SCEPDVCSYNIVISGFCNAGD 127

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           L  A+ +L  M+ A  AP+       I  +     L  A+  L  M   G  PNV+TY  
Sbjct: 128 LHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTA 184

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI  +    ++++A+KL++EM  +GC P+ V+Y  ++  LCK   +   +D+++KM+   
Sbjct: 185 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 244

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                       + F  +G +++A++L+  M   G  P+VVTY+A+++G C+  +  +AK
Sbjct: 245 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 304

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++L++M   G  P+  +Y+A ++GLC   K  EA +M+        TP+ + YS ++H  
Sbjct: 305 EVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 364

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV-N 478
            + GKL EA   ++EM K+   P  V  N +I  LC+ GK+  A+  +++    G  + +
Sbjct: 365 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPD 424

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           VV ++++I G C+   L EA  LLD M     +PD VTYTTIID L K GR+EEA  L+ 
Sbjct: 425 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 484

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSF 595
            M   G  P VVTY T+I   C+  +V++  +++E+M     C      YN ++  LC  
Sbjct: 485 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM-RNAGCPPNLVTYNTMVNGLCVS 543

Query: 596 GYLEEAGKILGKVL--RTASKADASTCHVLVESYLN 629
           G ++EA +++ ++   R     DA+T   +V + ++
Sbjct: 544 GRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMS 579



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/458 (32%), Positives = 246/458 (53%), Gaps = 27/458 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           + H PI+  M     +      GA   LR M      C P   +Y  L+ A++RA KL  
Sbjct: 148 FTHTPIITAM-----ANAGDLDGAMDHLRSMG-----CDPNVVTYTALIAAFARAKKLEE 197

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           AM +L  M++    PNL+  N  +  L   + +  A   +++M   G  PNV+T+N L+ 
Sbjct: 198 AMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVD 257

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------- 307
           G+C    + DA KL+  M  KG  P+ V+Y  ++  LCK ++  E ++++E+M       
Sbjct: 258 GFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTP 317

Query: 308 --VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                S L H      +IEEA++++ +M+  GC PDVV Y+++++ FC+ G+L +A+K L
Sbjct: 318 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTL 377

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW-WTPNAITYSVVMHGLRR 421
           Q+M      P+ V+Y   ++GLC  GK  EA+ ++   +E     P+ +TYS V++GL +
Sbjct: 378 QEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCK 437

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
              L EA  ++  M K G  P  V    +I  LC+ G+++ A+  +Q     GCA NVV 
Sbjct: 438 SDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVT 497

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +T+LI G C+   ++EA  ++++M      P+ VTY T+++ L  +GR++EA +L+ +M 
Sbjct: 498 YTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK 557

Query: 542 S--KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
                  P   TYRT+++       V++  +LLE+M S
Sbjct: 558 DGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 246/491 (50%), Gaps = 15/491 (3%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N+ + VLV   K  +A        LA   P+V +YN +I G+C+   +  A++L++EM  
Sbjct: 81  NSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKS 140

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL---------FHDQGRIEEAKE 325
            G +PD  ++  ++  +     +    D +  M  D N+         F    ++EEA +
Sbjct: 141 AGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMK 200

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+ +M + GC P++VTY  +V+  C++  +  A+ ++++M   G  PN +++ + ++G C
Sbjct: 201 LLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFC 260

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   +AR+++     +   PN +TYS ++ GL +  K  EA +V+ EM  +G  P   
Sbjct: 261 KRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAF 320

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             + LI  LC+  K++ A++ ++     GC  +VV ++S+I  FC+ G L EA   L +M
Sbjct: 321 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 380

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG-LVPTVVTYRTVIHRYCQVGR 564
              +K PD VTY T+ID L K G++ EA  ++ +M   G ++P VVTY TVI+  C+   
Sbjct: 381 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDM 440

Query: 565 VEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           + +  KLL++M  K  C      Y  +I+ LC  G LEEA  +L  + R     +  T  
Sbjct: 441 LVEAQKLLDRM-CKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 499

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE- 680
            L+           A +V   M N    P+L     +   L + G+ +EA  L+ R  + 
Sbjct: 500 TLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDG 559

Query: 681 RGHIQPKSEEH 691
           R    P +  +
Sbjct: 560 RAECSPDAATY 570



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 99/185 (53%), Gaps = 6/185 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + Y  ++  L K+ +   A+++L  M + G  C P+  +Y  +     + G+L  A Y
Sbjct: 424 DVVTYSTVINGLCKSDMLVEAQKLLDRMCKAG--CNPDVVTYTTIIDGLCKCGRLEEAEY 481

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M++A  APN++   T I  L    K+ +A R +E M+ AG  PN++TYN ++ G C
Sbjct: 482 LLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLC 541

Query: 258 DLHRIKDAIKLIDEMP--LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
              RIK+A +L+  M      CSPD  +Y T++  L     ++E   L+E+M + ++   
Sbjct: 542 VSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKSTTSSQQ 601

Query: 316 DQGRI 320
           +QG +
Sbjct: 602 EQGSL 606


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 161/558 (28%), Positives = 275/558 (49%), Gaps = 61/558 (10%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR 165
           L P  +  VL+   D   AL FF WA+ +  Y+H+      +L +L K      A  + R
Sbjct: 91  LSPEIVGKVLQRLIDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFR 150

Query: 166 LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV------------------ 207
                        +S L+  + RAGK+  A  +   M +  +                  
Sbjct: 151 SRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAG 210

Query: 208 ----------------APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
                            P+ +  NT I+ L   ++L  A+R LE M   G  PNV +YN 
Sbjct: 211 QCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNT 270

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           ++ G+C  +R+++A+ L+++M  +GC PD VSY TV+  LCK  ++ E   +M+KM+   
Sbjct: 271 VLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI--- 327

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                               Q GC P+V+TY  +V+GFCRVG+LD A +++++M   G +
Sbjct: 328 --------------------QRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYR 367

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN ++Y   ++  C       A +++    +    P+AI YS ++ G  + GKL EA D+
Sbjct: 368 PNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDL 427

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           + +M+++G  P    ++ LI +LC+   +D A++ ++  +   CA +VV ++ LI   C+
Sbjct: 428 LEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCK 487

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
              L EA S LD M   +  PD VTY +++D L K+ R+ +A  L  +M + G++P VVT
Sbjct: 488 AKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVT 547

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKV 608
           Y  VIH +C+   ++   K+LE+M  + KC      Y+ +I  LC  G +++A  +  ++
Sbjct: 548 YSIVIHSFCKDNNLDSAFKMLERM-KEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEM 606

Query: 609 LRTASKADASTCHVLVES 626
           L      +  T + L++ 
Sbjct: 607 LGCGCAPNLVTYNTLIDG 624



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 172/636 (27%), Positives = 308/636 (48%), Gaps = 44/636 (6%)

Query: 55   KYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAV 114
            +YRV        V  +  F H +VR    ++  R AW    E  L      L    +  V
Sbjct: 769  QYRVT------AVATQGGFHHKIVR----ILNSRFAWE-YAETALERFTGKLTTTVVGKV 817

Query: 115  LRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIEC 174
            L+   +   AL FF WA  Q  Y HD      +L+ L + K  + A +V     R  + C
Sbjct: 818  LQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVY----RNKLCC 873

Query: 175  RPEAFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
             P  F++ ++ +   RAG +  A  +L  M +  V  N+++ N  I  L    KL  AL 
Sbjct: 874  SPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALE 933

Query: 233  FLERMQLAG-ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
              + M+ +G   P+V TY+ ++       ++ DA +L+++M  KGCSP+ V+Y +++  L
Sbjct: 934  LFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGL 993

Query: 292  CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
            CK                        G+++EA  L+ +M++ GC P++VTY  +++G C+
Sbjct: 994  CK-----------------------AGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCK 1030

Query: 352  VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            +G +D+A  +L++M   GC+PN V+YT  L+  C  GK+ +A  ++    E+ + PN  T
Sbjct: 1031 LGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFT 1090

Query: 412  YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
            Y+ ++    ++ ++  AC ++  M++KG  P  V  N +I  LC+  K+      +++ L
Sbjct: 1091 YNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 1150

Query: 472  NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            +  C  ++V F ++I   C+   ++ A  L + +      P+ VTY +++  L K+ R +
Sbjct: 1151 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 1210

Query: 532  EATELMMKMLSK-GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQV 588
            +A  L+ +M  K G  P ++TY TVI   C+  RV+   KL  +MLS         Y+ V
Sbjct: 1211 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIV 1270

Query: 589  IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
            I +LC + +++EA  +L  +L+      A T   L++ +   G    A ++   + ++  
Sbjct: 1271 ISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGS 1330

Query: 649  IPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
             PD+       + L   G+  +A  L+   +  G +
Sbjct: 1331 YPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLV 1366



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 235/485 (48%), Gaps = 51/485 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + Y  M+  LSK+     A R+L  M   G    P  FSY  V   + +A ++ NA++
Sbjct: 229 DSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA--PNVFSYNTVLHGFCKANRVENALW 286

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M      P+++   T I+ L   +++ +A R +++M   G  PNV+TY  L+ G+C
Sbjct: 287 LLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFC 346

Query: 258 DLHRIKDAIKLIDEMPLKG-----------------------------------CSPDKV 282
            +  +  A++L+ +M  +G                                   C PD +
Sbjct: 347 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAI 406

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQM 330
           +Y T++   CK  +++E  DL+E+M+               +       I+ A+EL+   
Sbjct: 407 NYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMS 466

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
             M C PDVV Y+ +++  C+   L +A+  L  M  + C P+ V+Y + ++GLC + + 
Sbjct: 467 IGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRI 526

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            +A  + +        P+ +TYS+V+H   ++  L  A  ++  M +    P  V  + L
Sbjct: 527 NDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSAL 586

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I  LC+ G +D A    QE L  GCA N+V + +LI G C+   +E+A  +L+ M     
Sbjct: 587 INGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSC 646

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            PD++TYT +I+ L    R+EEA  ++ +M  KG +P  +TY T++    +   +E + +
Sbjct: 647 TPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQ 706

Query: 571 LLEKM 575
           LL++M
Sbjct: 707 LLKEM 711



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 257/555 (46%), Gaps = 61/555 (10%)

Query: 77   LVREVCRLIELRSAWS-----PKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWA 131
            L+  +CR  ++ +A+      P+       +L ++  + +C+  +  +    AL+ F   
Sbjct: 883  LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDS----ALELFKEM 938

Query: 132  DRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRA 189
            +       D   Y  +++ L K+     A R++  M  +G  C P   +Y  L+    +A
Sbjct: 939  EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKG--CSPNVVTYSSLLHGLCKA 996

Query: 190  GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
            GKL  A  +L  M ++  +PN++  NT I       ++ +A   LE M   G  PNV+TY
Sbjct: 997  GKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 1056

Query: 250  NCLIKGYCDLHRIKDAIKLID-----------------------------------EMPL 274
              L+  +C   + +DAI L++                                    M  
Sbjct: 1057 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 1116

Query: 275  KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NLFHDQG----RIEE 322
            KGC P+ VSY TV+  LCK  ++ E   L+E+M++++        N   D      R++ 
Sbjct: 1117 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 1176

Query: 323  AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH-HGCKPNTVSYTAFL 381
            A EL N + + GC P++VTY ++V+G C+    DQA+ +L++M    GC P+ ++Y   +
Sbjct: 1177 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 1236

Query: 382  NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
            +GLC + +   A ++      +   P+ +TYS+V+  L +   + EA +V+  M+K GF 
Sbjct: 1237 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD 1296

Query: 442  PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
            P  +    LI   C+ G +D A + +Q  L+KG   +VV F+  I    ++G L +A  L
Sbjct: 1297 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 1356

Query: 502  LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            L+ M      PDTVTY T++         E+A +L   M   G  P   TY T++     
Sbjct: 1357 LETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVD 1416

Query: 562  VGRVEDLLKLLEKML 576
                +DLL  + K +
Sbjct: 1417 KKSYKDLLAEVSKSM 1431



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 209/390 (53%), Gaps = 19/390 (4%)

Query: 174  CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
            C+P   +Y  L+ A+ + GK  +A+ ++ +M +    PNL   N+ + +    +++ +A 
Sbjct: 1049 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 1108

Query: 232  RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
            + L  M   G  PNV++YN +I G C   ++ + + L+++M    C PD V++ T++  +
Sbjct: 1109 QLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 1168

Query: 292  CKEKRIK---EVRDLMEK------MVNDSNLFHD---QGRIEEAKELVNQMS-QMGCIPD 338
            CK  R+    E+ +L+++      +V  ++L H      R ++A+ L+ +M+ + GC PD
Sbjct: 1169 CKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPD 1228

Query: 339  VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            ++TY  V++G C+   +D+A K+  QM   G  P+ V+Y+  ++ LC      EA  ++ 
Sbjct: 1229 IITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLE 1288

Query: 399  TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
               +  + P AITY  ++ G  + G L +A ++++ ++ KG +P  V  ++ I  L + G
Sbjct: 1289 LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRG 1348

Query: 459  KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
            ++  A + ++  L  G   + V + +L++GFC     E+A+ L + M  C  +PD  TYT
Sbjct: 1349 RLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYT 1408

Query: 519  TIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            T++  L      ++    ++  +SK +V T
Sbjct: 1409 TLVGHLVDKKSYKD----LLAEVSKSMVDT 1434



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 183/359 (50%), Gaps = 3/359 (0%)

Query: 331  SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            +++ C P++ T+T +++G CR G++  A ++L++M  HG   N + +   + GLC   K 
Sbjct: 869  NKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKL 928

Query: 391  LEAREMINTSEEEW-WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
              A E+    EE     P+  TYS ++  L + GK+ +AC +V +MV KG  P  V  + 
Sbjct: 929  DSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSS 988

Query: 450  LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
            L+  LC+ GK+D A   +Q     GC+ N+V + ++I G C+ G ++EA  LL++M    
Sbjct: 989  LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 1048

Query: 510  KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
              P+ VTYT ++DA  K G+ E+A  L+  M+ KG VP + TY +++  +C+   VE   
Sbjct: 1049 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 1108

Query: 570  KLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            +LL  M+ K       +YN VI  LC    + E   +L ++L      D  T + ++++ 
Sbjct: 1109 QLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 1168

Query: 628  LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
                   +AY++   +      P+L     +   L    + ++A+ L+     +    P
Sbjct: 1169 CKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP 1227



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 185/348 (53%), Gaps = 18/348 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           YR + I Y  ++ +  +    + A +VL++M + G  C P+A +Y  ++  + +AGKLR 
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG--CPPDAINYSTIISGFCKAGKLRE 423

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA-GITPNVLTYNCLI 253
           A  +L  M +    P++   +T I  L     +  A   L RM +     P+V+ Y+ LI
Sbjct: 424 AHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELL-RMSIGMDCAPDVVAYSILI 482

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------ 307
              C   R+ +A   +D M    C PD V+Y +V+  LCK +RI +   L ++M      
Sbjct: 483 HALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVM 542

Query: 308 ---VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
              V  S + H       ++ A +++ +M +  C+PDVVTY+A++NG C+ G +D+A  +
Sbjct: 543 PDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDV 602

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
            Q+M   GC PN V+Y   ++GLC   K  +A EM+    ++  TP++ITY+ +++GL  
Sbjct: 603 FQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCN 662

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
             +L EA  V+REM  KG  P  +    L+++L +   ++  ++ ++E
Sbjct: 663 ASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKE 710



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 217/511 (42%), Gaps = 66/511 (12%)

Query: 137  YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
            Y  +   Y  +L++  K    + A ++L  M ++G  C P   SY  ++    +A K+  
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG--CVPNVVSYNTVIAGLCKATKVHE 1141

Query: 195  AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
             + +L  M      P+++  NT I  +    ++  A      +Q +G TPN++TYN L+ 
Sbjct: 1142 GVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVH 1201

Query: 255  GYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            G C   R   A  L+ EM  K GCSPD ++Y TV+  LCK KR+     L  +M++D   
Sbjct: 1202 GLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLA 1261

Query: 314  FHDQGR------------IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
              D               ++EA  ++  M + G  P  +TY  +++GFC+ G LD+A ++
Sbjct: 1262 PDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI 1321

Query: 362  LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
            LQ +   G  P+ V+++ F++ L   G+  +A E++ T       P+ +TY+ ++ G   
Sbjct: 1322 LQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCD 1381

Query: 422  EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC------------REGKMDGAKKFMQE 469
                 +A D+   M + G  P       L+  L              +  +D   K   E
Sbjct: 1382 ASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHE 1441

Query: 470  CLNK-------------GCAV-----------------------NVVNFTSLIRGFCQKG 493
              +K             GCA+                       NVV +++++  +    
Sbjct: 1442 LSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHK 1501

Query: 494  DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK-GLVPTVVTY 552
              E+A  L   M L   +PD VT+ +++      G ++ A +  + +    GL P V  +
Sbjct: 1502 QEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHF 1561

Query: 553  RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
              VI    ++G V +   L+  M  K    T
Sbjct: 1562 SCVIDLLGRLGLVNEAEDLMLGMPCKPSAAT 1592



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 153/332 (46%), Gaps = 36/332 (10%)

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            LN L    +  +A ++  +  E  W  + +TYS ++ G  R GK+  A ++  EM +KG
Sbjct: 132 LLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKG 191

Query: 440 F----------------------------------FPTPVEINLLIQSLCREGKMDGAKK 465
                                               P  V  N +I  L +  ++D A +
Sbjct: 192 LKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIR 251

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            ++E ++ G A NV ++ +++ GFC+   +E AL LL+ M      PD V+YTT+I+ L 
Sbjct: 252 LLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLC 311

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
           K  +V+EA  +M KM+ +G  P V+TY T++  +C+VG ++  ++L+ KM  +  +    
Sbjct: 312 KLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAI 371

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            YN ++   C    +E A ++L  +++T    DA     ++  +   G    A+ +  +M
Sbjct: 372 TYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQM 431

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
             R   PD+     + + L      + A  L+
Sbjct: 432 IRRGCRPDVACLSTLIDALCKAAAIDSAQELL 463



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 166/365 (45%), Gaps = 22/365 (6%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
            D + Y +++  L K +    A  VL LM + G +  P A +Y  L+  + + G L  A+ 
Sbjct: 1263 DDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD--PGAITYGTLIDGFCKTGNLDKALE 1320

Query: 198  VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            +L ++      P+++  +  I  L    +L +A   LE M  AG+ P+ +TYN L+KG+C
Sbjct: 1321 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 1380

Query: 258  DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN--LFH 315
            D    +DA+ L + M   GC PD  +Y T++G+L  +K  K++   + K + D+   L H
Sbjct: 1381 DASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNH 1440

Query: 316  DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
            +     EA   V    ++GC        A+V+ F + G    A+K+ + M       N V
Sbjct: 1441 ELSSKLEASIEVEADVRLGC--------AIVDMFGKCGSPQDARKVFEGMDQR----NVV 1488

Query: 376  SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
             ++A L     + +  +A  +      E   P+A+T+  ++      G L  A D    +
Sbjct: 1489 LWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSI 1548

Query: 436  VKK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
             +  G  P     + +I  L R G ++ A+  M   L   C  +   +  L+  +   GD
Sbjct: 1549 SRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLM---LGMPCKPSAATWNCLLSAYKICGD 1605

Query: 495  LEEAL 499
             E AL
Sbjct: 1606 FERAL 1610


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 160/514 (31%), Positives = 262/514 (50%), Gaps = 13/514 (2%)

Query: 132 DRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           D    Y  DP    Y ++L+IL      + A  V   M  RG+      F  +M A    
Sbjct: 159 DMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMV 218

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
            ++ +A  +L  M K    PN +I  T IH L   N++++AL+ LE M L    P+V T+
Sbjct: 219 SEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTF 278

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N +I G C   RI +A KL+D M L+G S D ++Y  +M  LC+  ++ E R L+ K+ N
Sbjct: 279 NDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN 338

Query: 310 DSNLFHD--------QGRIEEAKELV-NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
            + + ++         GR EEAK+L+ N M   G  PD  T+  +++G  + G L  A +
Sbjct: 339 PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALE 398

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L +M     +PN ++YT  +NG C  G+  EA E++N+   +  + N + Y+ ++  L 
Sbjct: 399 LLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALC 458

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           ++G + EA  +  EM  KG  P     N LI  LC+  KM+ A     +   +G   N V
Sbjct: 459 KDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTV 518

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +L+  F  +  +++A  L+D+M       D +TY  +I AL K G VE+   L  +M
Sbjct: 519 TYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEM 578

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYL 598
           L KG+ PT+++   +I   C+ G+V D LK L+ M+ +        YN +I  LC  G++
Sbjct: 579 LGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHV 638

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           +EA  +  K+     + DA T + L+  + ++G+
Sbjct: 639 QEASNLFNKLQSEGIRPDAITYNTLISRHCHEGM 672



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 170/613 (27%), Positives = 300/613 (48%), Gaps = 28/613 (4%)

Query: 98  ELRNLLRSLK-----PRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILS 152
           +L+ L RSL      P Q+C +L    D   +++ F  A  Q  Y H     Y++++ L 
Sbjct: 51  DLKQLRRSLSLTPISPFQLCKLLELPLDIPTSMELFQRAGAQKGYSHTFDACYLLIDKLG 110

Query: 153 KTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM-YVLSMMQKAAVAPNL 211
                +  +++L+ M   G+  +   F  +M  Y +AG    A   +L M    +  P  
Sbjct: 111 AVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTF 170

Query: 212 LICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
              N  + +LV G+    A      M   G++P V T+  ++K  C +  +  A  L+ +
Sbjct: 171 KSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRD 230

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----NDSNLFHD-------QGR 319
           M   GC P+ V Y T++  LC+  R+ E   L+E M       D   F+D        GR
Sbjct: 231 MAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGR 290

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           I EA +L+++M   G   D +TY  +++G CR+G++D+A+ +L ++ +    PNTV Y  
Sbjct: 291 IHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNT 346

Query: 380 FLNGLCHNGKSLEAREMI-NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
            ++G   +G+  EA++++ N      + P+A T+++++ GL ++G L  A +++ EMV K
Sbjct: 347 LISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAK 406

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
            F P  +   +LI   C++G+++ A + +     KG ++N V +  LI   C+ G++EEA
Sbjct: 407 RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEA 466

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L L  +M      PD  T+ ++I+ L KN ++EEA  L   M  +G++   VTY T++H 
Sbjct: 467 LQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHA 526

Query: 559 YCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
           +     ++   KL+++ML +  C      YN +I+ LC  G +E+   +  ++L      
Sbjct: 527 FLMRDSIQQAFKLVDEMLFR-GCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFP 585

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
              +C++L+      G    A K    M +R L PD+     +   L   G  +EA  L 
Sbjct: 586 TIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLF 645

Query: 676 LRFVERGHIQPKS 688
            +    G I+P +
Sbjct: 646 NKLQSEG-IRPDA 657



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 235/501 (46%), Gaps = 53/501 (10%)

Query: 122 RVALQFFYWADRQWRYRHDPIVYY--MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF 179
           RVA   FY  D   R    P VY   ++++ L        A  +LR MA+ G  C P + 
Sbjct: 187 RVAPNVFY--DMLSR-GVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHG--CVPNSV 241

Query: 180 SY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            Y  L+ A     ++  A+ +L  M      P++   N  IH L    ++ +A + L+RM
Sbjct: 242 IYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRM 301

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP------------------------ 273
            L G + + LTY  L+ G C + ++ +A  L++++P                        
Sbjct: 302 LLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAK 361

Query: 274 --------LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NL 313
                   + G  PD  ++  ++  L K+  +    +L+ +MV               N 
Sbjct: 362 DLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILING 421

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           F  QGR+EEA E+VN MS  G   + V Y  ++   C+ G +++A ++  +M   GCKP+
Sbjct: 422 FCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPD 481

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             ++ + +NGLC N K  EA  + +    E    N +TY+ ++H       + +A  +V 
Sbjct: 482 IYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVD 541

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM+ +G     +  N LI++LC+ G ++      +E L KG    +++   LI G C+ G
Sbjct: 542 EMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTG 601

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            + +AL  L DM      PD VTY ++I+ L K G V+EA+ L  K+ S+G+ P  +TY 
Sbjct: 602 KVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYN 661

Query: 554 TVIHRYCQVGRVEDLLKLLEK 574
           T+I R+C  G   D   LL K
Sbjct: 662 TLISRHCHEGMFNDACLLLYK 682



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 159/337 (47%), Gaps = 25/337 (7%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R+  + I Y +++    K    + A  ++  M+ +G+      ++ L+ A  + G +  A
Sbjct: 407 RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEA 466

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + +   M      P++   N+ I+ L   +K+ +AL     M L G+  N +TYN L+  
Sbjct: 467 LQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHA 526

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           +     I+ A KL+DEM  +GC  D ++Y  ++  LCK                      
Sbjct: 527 FLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCK---------------------- 564

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G +E+   L  +M   G  P +++   +++G CR G+++ A K LQ M H G  P+ V
Sbjct: 565 -TGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIV 623

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y + +NGLC  G   EA  + N  + E   P+AITY+ ++     EG  ++AC ++ + 
Sbjct: 624 TYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKG 683

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDG--AKKFMQEC 470
           V  GF P  V  ++LI  + ++       +K F  EC
Sbjct: 684 VDSGFIPNEVTWSILINYIVKKIPWGARFSKDFTVEC 720



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 162/338 (47%), Gaps = 12/338 (3%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   G E     F+ ++    + G L +A+ +L+ M      PN++     I+      +
Sbjct: 368 MVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGR 427

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L +A   +  M   G++ N + YNCLI   C    I++A++L  EM  KGC PD  ++ +
Sbjct: 428 LEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNS 487

Query: 287 VMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMG 334
           ++  LCK  +++E   L   M         V  + L H    +  I++A +LV++M   G
Sbjct: 488 LINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRG 547

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C  D +TY  ++   C+ G +++   + ++M   G  P  +S    ++GLC  GK  +A 
Sbjct: 548 CPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDAL 607

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           + +        TP+ +TY+ +++GL + G + EA ++  ++  +G  P  +  N LI   
Sbjct: 608 KFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRH 667

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           C EG  + A   + + ++ G   N V ++ LI    +K
Sbjct: 668 CHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKK 705


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 162/516 (31%), Positives = 266/516 (51%), Gaps = 15/516 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y ++L++L        A  V   M  +G+      F  +M A     ++ NA  +L  M 
Sbjct: 178 YNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMT 237

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           K    PN +I  T I  L   +++ +AL+ LE M L G  P+V T+N +I G+C L+R+ 
Sbjct: 238 KHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVL 297

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NLFH 315
           +  KL+D M LKG +P+ ++Y  +M  LCK  RI E + L+ K+   +        N F 
Sbjct: 298 EGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFV 357

Query: 316 DQGRIEEAKELV-NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             GR+ EA   V ++M   G +PDV T++ +VNG C+ G    A +++  M   GCKPN 
Sbjct: 358 RNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNL 417

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +YT  ++G C  G+  EA  ++     + ++ N + Y+ ++  L + GK+ EA D+  E
Sbjct: 418 NTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGE 477

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M  KG  P     N LI  LCR  +M+ A    ++ + +G   N V F +LI  F ++G+
Sbjct: 478 MSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGE 537

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           ++EAL L++DM       D +TY  +I AL K G VE+   L  +M+ KGL P+++T   
Sbjct: 538 IQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNI 597

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I+ +C  G+V + L+ +  M+ +        YN +I  LC  G ++EA  +  K+    
Sbjct: 598 LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
            + D+ T + L+     +G    A+  AC +  R +
Sbjct: 658 IQPDSITYNTLICWLCREG----AFDDACFLLYRGV 689



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 173/612 (28%), Positives = 295/612 (48%), Gaps = 31/612 (5%)

Query: 98  ELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
           ELR     + P Q+C +L    D   +++ F WA  Q  Y H   VYY++++ L      
Sbjct: 61  ELRRSFNKITPFQLCKLLELPLDVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGF 120

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA-AVAPNLLICNT 216
           +   R+L  M   GI  R   F  +M  Y RAG    A  +L  M+      P+    N 
Sbjct: 121 KVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNV 180

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            + VLVVGN  + A      M   G++PN  T+  ++K  C ++ + +A  L+ +M   G
Sbjct: 181 VLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHG 240

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----NDSNLFHDQ-------GRIEEAK 324
           C P+ + Y T++  L K  R+ E   L+E+M       D N F+          R+ E  
Sbjct: 241 CVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGA 300

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +LV++M   G  P+ +TY  +++G C+   +D+A+ +L ++      PN V +   +NG 
Sbjct: 301 KLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP----GPNVVHFNTLVNGF 356

Query: 385 CHNGKSLEAR-----EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
             NG+  EA      +MIN      + P+  T+S +++GL ++G    A ++V +M  KG
Sbjct: 357 VRNGRLNEATAFVYDKMINNG----YVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKG 412

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P      +LI   C++G+++ A   ++E L KG ++N V + +LI   C+ G + EAL
Sbjct: 413 CKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEAL 472

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +  +M      PD  T+ ++I  L +   +E+A  L   M+ +G++   VT+ T+IH +
Sbjct: 473 DMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAF 532

Query: 560 CQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            + G +++ LKL+  ML +  C      YN +I+ LC  G +E+   +  +++R      
Sbjct: 533 LRRGEIQEALKLVNDMLFR-GCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPS 591

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
             TC++L+  +   G    A +    M +R   PD+     +   L   G+ +EA  L  
Sbjct: 592 IITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFE 651

Query: 677 RFVERGHIQPKS 688
           +    G IQP S
Sbjct: 652 KLQAEG-IQPDS 662



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 155/320 (48%), Gaps = 23/320 (7%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y ++++   K    + A  +LR M  +G       ++ L+ A  + GK+  A+ +   M
Sbjct: 419 TYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEM 478

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
                 P++   N+ I  L   +++  AL     M L G+  N +T+N LI  +     I
Sbjct: 479 SSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEI 538

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
           ++A+KL+++M  +GC  D+++Y  ++  LCK                        G +E+
Sbjct: 539 QEALKLVNDMLFRGCPLDEITYNGLIKALCK-----------------------TGAVEK 575

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
              L  +M + G  P ++T   ++NGFC  G++  A + ++ M H G  P+ V+Y + +N
Sbjct: 576 GLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLIN 635

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC  G+  EA  +    + E   P++ITY+ ++  L REG   +AC ++   V+ GF P
Sbjct: 636 GLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVP 695

Query: 443 TPVEINLLIQSLCREGKMDG 462
             V  N+L+ +  ++   +G
Sbjct: 696 NDVTWNILVYNFGKQSNSEG 715



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 159/331 (48%), Gaps = 12/331 (3%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            FS L+    + G   +A+ +++ M      PNL      I       +L +A   L  M
Sbjct: 384 TFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREM 443

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK---- 293
              G + N + YN LI   C   +I +A+ +  EM  KGC PD  ++ +++  LC+    
Sbjct: 444 LTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEM 503

Query: 294 EKRIKEVRDL-MEKMVNDSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
           E  +   RD+ +E ++ +S  F+        +G I+EA +LVN M   GC  D +TY  +
Sbjct: 504 EDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGL 563

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           +   C+ G +++   + ++M   G  P+ ++    +NG C  GK   A E +       +
Sbjct: 564 IKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGF 623

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           +P+ +TY+ +++GL + G++ EA ++  ++  +G  P  +  N LI  LCREG  D A  
Sbjct: 624 SPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACF 683

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            +   +  G   N V +  L+  F ++ + E
Sbjct: 684 LLYRGVENGFVPNDVTWNILVYNFGKQSNSE 714


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 158/543 (29%), Positives = 269/543 (49%), Gaps = 9/543 (1%)

Query: 98  ELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
           E + +   +K   +   LR++ D  +A  +F        ++H  + Y +M+E L +    
Sbjct: 36  EYQEIKTPIKESDVVMRLRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDV 95

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
            G + +L+ M   GI C  + F  ++  Y R G    A+ +   +++    P + I N  
Sbjct: 96  DGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHL 155

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +  ++  N+          M+  G  PNV TYN L+K  C  +R+  A KL+ EM  KGC
Sbjct: 156 LDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGC 215

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------QGRIEEAKELVNQM 330
            PD VSY TV+  + K  +++E R+L  +   + ++++        + +++E   L+ QM
Sbjct: 216 EPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQM 275

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            + G  P+V+TY+ V++    +G ++ A  +  +M+  GC PN  ++T+ + G    G+ 
Sbjct: 276 VEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRV 335

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
           LEA  + N   EE + PN + Y+ ++HGL   GK+ EA  V  +M + G  P       L
Sbjct: 336 LEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGAL 395

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I    + G + GA +   + +  GC  NVV +TS++   C+     +A SL++ M     
Sbjct: 396 IDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNC 455

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P+TVT+ T I  L  +GRVE A  L  +M   G  P + TY  V+    +  R+++ L+
Sbjct: 456 PPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALE 515

Query: 571 LLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           L+ +M  K  +     YN +    C+ G  EEA K+LGK+L    K DA T + L  +Y 
Sbjct: 516 LVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYC 575

Query: 629 NKG 631
            +G
Sbjct: 576 MQG 578



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 208/452 (46%), Gaps = 30/452 (6%)

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
            L++M+L GI+ +   +  +I  Y  +   + A+K+   +   GC P    Y  ++  + 
Sbjct: 101 LLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAML 160

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
            E R + +  +   M  D             KE           P+V TY  ++   C+ 
Sbjct: 161 SENRFQMIEPIYSNMKRD------------GKE-----------PNVYTYNILLKALCKN 197

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
             +D A K+L +M + GC+P+ VSYT  ++ +   GK  EARE+        + PN   Y
Sbjct: 198 NRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQPNVSVY 252

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           + +++G  RE K+ E   ++ +MV+KG  P  +  + +I SL   G ++ A     +   
Sbjct: 253 NALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFV 312

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +GC+ NV  FTSL++G+  +G + EAL++ + M     +P+ V Y T+I  L  +G++ E
Sbjct: 313 RGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGE 372

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIE 590
           A  +  KM   G  P V TY  +I  + + G +    ++  KM++         Y  ++ 
Sbjct: 373 AVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVN 432

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC      +A  ++ K+       +  T +  ++     G    A  + C+M      P
Sbjct: 433 VLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSP 492

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++K   +V + L+ E + +EA  L+    E+G
Sbjct: 493 NIKTYNEVLDGLLKENRIKEALELVTEMEEKG 524



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 166/337 (49%), Gaps = 11/337 (3%)

Query: 320 IEEAKELVNQMSQMG--CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           ++  + L+ QM   G  C  D+  +  V+N + RVG  +QA KM  ++   GC+P    Y
Sbjct: 95  VDGVQYLLQQMKLEGISCSEDL--FINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIY 152

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              L+ +    +      + +  + +   PN  TY++++  L +  ++  AC ++ EM  
Sbjct: 153 NHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSN 212

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P  V    +I S+ + GK++ A++     L+     NV  + +LI GFC++  ++E
Sbjct: 213 KGCEPDVVSYTTVISSMSKLGKVEEARE-----LSIRFQPNVSVYNALINGFCREYKVKE 267

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
              LL  M     DP+ +TY+T+I +LS  G VE A  +  KM  +G  P V T+ +++ 
Sbjct: 268 VFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMK 327

Query: 558 RYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
            Y   GRV + L +  +M  +  +    AYN +I  LCS G + EA  +  K+ R     
Sbjct: 328 GYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSP 387

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           + ST   L++ +   G  + A ++  +M     IP++
Sbjct: 388 NVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNV 424



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 120/244 (49%), Gaps = 24/244 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +VY  M+ +L ++ +   A  ++  M+          F+  +     +G++  A+ +   
Sbjct: 425 VVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQ 484

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M++   +PN+   N  +  L+  N++ +AL  +  M+  G+  N++TYN +  G+C++ +
Sbjct: 485 MEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGK 544

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            ++A+KL+ +M + G  PD ++Y T+    C                        QG+++
Sbjct: 545 FEEALKLLGKMLVGGVKPDAITYNTLTYAYCM-----------------------QGKVK 581

Query: 322 EAKELVNQMSQMG-CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            A +L++++S  G  +P+V  YT+++ G C    +++A   L +M + G   N  ++ A 
Sbjct: 582 TAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNAL 641

Query: 381 LNGL 384
           + GL
Sbjct: 642 VRGL 645



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 140/317 (44%), Gaps = 41/317 (12%)

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK-KGFFPTPVEINLLIQSLCREGKM 460
           +E  TP  I  S V+  LR E  +  A +  R +   K F  T +   ++I+ L RE  +
Sbjct: 38  QEIKTP--IKESDVVMRLRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDV 95

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS-------------------L 501
           DG +  +Q+   +G + +   F ++I  + + G  E+AL                    L
Sbjct: 96  DGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHL 155

Query: 502 LD----------------DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           LD                +M    K+P+  TY  ++ AL KN RV+ A +L+++M +KG 
Sbjct: 156 LDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGC 215

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
            P VV+Y TVI    ++G+VE+  +L  +    Q   + YN +I   C    ++E   +L
Sbjct: 216 EPDVVSYTTVISSMSKLGKVEEARELSIRF---QPNVSVYNALINGFCREYKVKEVFLLL 272

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
           G+++      +  T   ++ S    G   LA  V  +MF R   P++     + +   + 
Sbjct: 273 GQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMR 332

Query: 666 GKSEEADTLMLRFVERG 682
           G+  EA  +  R  E G
Sbjct: 333 GRVLEALNIWNRMAEEG 349


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 185/653 (28%), Positives = 293/653 (44%), Gaps = 50/653 (7%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWR 136
           LV +V  LI     W PK   EL  L  +L+P  +  ++ +  +   ALQFFYW  ++  
Sbjct: 42  LVFKVLDLISTDPHW-PK-NPELNRLASTLRPHHVSKIINTHINTDTALQFFYWISKRHF 99

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE------------------- 177
           Y+HD   +  ML  L K K+   A  V  LM +    CR E                   
Sbjct: 100 YKHDMGCFVSMLNRLVKDKILAPADHVRILMIK---ACRNEDELKRVTDFLHGISSSDSG 156

Query: 178 -------AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
                  +F+ L++   +   + +A  V + +  + V P+LL  NT I++L    K+ +A
Sbjct: 157 LFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEA 216

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           +    ++    + P+  TY  LI G+C   ++  A ++ D M   GC+P+ V+Y T++  
Sbjct: 217 VLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLING 276

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
           LC E RI E  D++E+M                +   D GR+++A  LV  M + GC P 
Sbjct: 277 LCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPS 336

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V TYTA+++G  R G+++ A  M  +M   G  PNTV+Y A +N LC  G+   A ++ +
Sbjct: 337 VQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFD 396

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
             E      NA TY+ ++ GL     + +A  V  +M+K G  PT V  N LI    + G
Sbjct: 397 WMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRG 456

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
            ++ A +F+       C  +   +  LI GFC+ G L+ A S   +M  C   P+  TYT
Sbjct: 457 YLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYT 516

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            +ID   K G+++ A  L  +M   G   ++ TY  +I    +  R  +  K   KM  +
Sbjct: 517 AMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ 576

Query: 579 --QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
             Q     Y  +I  LC       A KI  ++ +     +A T   L+     +G     
Sbjct: 577 GLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEG----K 632

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
              A R+      P +     +   L  EG+S EA  L+    E+G + P  E
Sbjct: 633 VDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKG-LSPSME 684



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 248/545 (45%), Gaps = 31/545 (5%)

Query: 140 DPIVYYMMLEILSKTKL--CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           +P VY   + I S   +     A  ++R M ++G     + ++ ++    RAGK+  A+ 
Sbjct: 299 EPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIG 358

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M K  + PN +  N  I+ L    +   AL+  + M+  G   N  TYN +IKG  
Sbjct: 359 MYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLF 418

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
            +  I+ A+ + ++M   G SP  V+Y T++           V +L             +
Sbjct: 419 GMDDIEKAMVVFNKMLKDGPSPTVVTYNTLI-----------VENL------------KR 455

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G +  A   +  M +  C PD  TY  +++GFC+ G+LD A     +M   G  PN  +Y
Sbjct: 456 GYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTY 515

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           TA ++G C  GK   A  +    EE   + +  TY+ ++ GL +  + SEA     +M +
Sbjct: 516 TAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTE 575

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P  +    LI  LC+    + A K   E   K C  N   +TSLI G CQ+G ++ 
Sbjct: 576 QGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDA 635

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A  L ++      +P   TY+T++  L + GR  EA++L+  M  KGL P++  Y +++ 
Sbjct: 636 AERLTEN----GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLV 691

Query: 558 RYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
            +C+  +V+  L++   M  K  Q     Y  +I  LC     EEA  I   +L+    +
Sbjct: 692 AHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNS 751

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           D     VLV+  L +G   L  K    M +RN  P L     ++  L   GKS   D + 
Sbjct: 752 DLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIG 811

Query: 676 LRFVE 680
            R  E
Sbjct: 812 NRLRE 816



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 196/442 (44%), Gaps = 28/442 (6%)

Query: 123 VALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYL 182
           +AL+ F W +      +    Y  +++ L      + A  V   M + G       ++ L
Sbjct: 390 IALKIFDWMEGHGTLANAQ-TYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTL 448

Query: 183 MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
           +V   + G L NA   L MM+++   P+       I     G KL  A  F   M   GI
Sbjct: 449 IVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGI 508

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
           +PN  TY  +I GYC   +I  A+ L + M   GCS    +Y  ++  L K         
Sbjct: 509 SPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSK--------- 559

Query: 303 LMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                           R  EA++   +M++ G  P+ +TYT+++NG C+    + A K+ 
Sbjct: 560 --------------GNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIF 605

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            +M    C PN  +YT+ + GLC  GK ++A E +    E    P   TYS ++ GL RE
Sbjct: 606 HEMEKKNCLPNAHTYTSLIYGLCQEGK-VDAAERLT---ENGCEPTIDTYSTLVSGLCRE 661

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G+ +EA  +V  M +KG  P+      L+ + C+  K+D A +       KG   ++  +
Sbjct: 662 GRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIY 721

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
             LI   C     EEAL++   +   + + D + +T ++D L + G  +   + +  M S
Sbjct: 722 KVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMES 781

Query: 543 KGLVPTVVTYRTVIHRYCQVGR 564
           +   P++ TY  +     +VG+
Sbjct: 782 RNCTPSLHTYIILARELSKVGK 803


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 187/634 (29%), Positives = 293/634 (46%), Gaps = 47/634 (7%)

Query: 98  ELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
           ELR  L  + P Q+C +L    D   +++ F WA  Q  Y H   VYYM+++ L      
Sbjct: 86  ELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEF 145

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM-YVLSMMQKAAVAPNLLICNT 216
           +    +L  M + GI  R   F  +M  Y RAG    A   +L M    +  P     N 
Sbjct: 146 KTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNV 205

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            + VL+ GN           M   GI+P V T+  ++K  C ++ +  A  L+ +M   G
Sbjct: 206 VLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHG 265

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD--QG-----RIEEAK 324
           C P+ + Y T++  L K  R+ EV  L+E+M     + D N F+D   G     RI EA 
Sbjct: 266 CVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAA 325

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML---------------------- 362
           +LV++M   G  P+  TY  +++G CR+G++D+A+ +L                      
Sbjct: 326 KLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRG 385

Query: 363 ----------QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
                     + M   GC P+  +Y   + GLC  G  + ARE++N  + +   PN ITY
Sbjct: 386 RLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITY 445

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           ++++    +EG+L EA +V+ EM  KG     V  N LI +LC++ K+  A     +  +
Sbjct: 446 TILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSS 505

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           KGC  ++  F SLI G C+    EEAL L  DM L     +T+TY T+I A  + G ++E
Sbjct: 506 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 565

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIE 590
           A +L+  ML +G     +TY  +I   C+ G +E  L L E M+SK       + N +I 
Sbjct: 566 ALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 625

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC  G ++ A + L  ++      D  T + L+      G    A  +  ++    + P
Sbjct: 626 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 685

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           D      +      EG  ++A  L+ R V+ G I
Sbjct: 686 DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFI 719



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 276/551 (50%), Gaps = 13/551 (2%)

Query: 132 DRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           D +  Y  +P    Y ++L++L      +    V   M  +GI      F  +M A    
Sbjct: 189 DMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLV 248

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
            ++ +A  +L  M +    PN ++  T IH L    ++ + L+ LE M L G  P+V T+
Sbjct: 249 NEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTF 308

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N  I G C + RI +A KL+D M L+G +P+  +Y  +M  LC+  ++ E R L+ K+ N
Sbjct: 309 NDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN 368

Query: 310 DS--------NLFHDQGRIEEAKELVNQ-MSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
            +        N +  +GR++EAK ++++ M  +GC PD+ TY  ++ G C+ G L  A++
Sbjct: 369 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 428

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           ++ +M   GC+PN ++YT  ++  C  G+  EAR +++    +    NA+ Y+ ++  L 
Sbjct: 429 LMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALC 488

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           ++ K+ +A ++  +M  KG  P     N LI  LC+  K + A    Q+ L +G   N +
Sbjct: 489 KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 548

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +LI  F ++G ++EAL L++DM       D +TY  +I AL + G +E+   L   M
Sbjct: 549 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 608

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYL 598
           +SKGL P  ++   +I+  C+ G ++  L+ L  M+ +        YN +I  LC  G  
Sbjct: 609 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 668

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           +EA  +  K+       DA T + L+  +  +G+   A+ +  R  +   IP+      +
Sbjct: 669 QEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 728

Query: 659 SERLILEGKSE 669
               I EG  E
Sbjct: 729 VSNFIKEGDQE 739


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 182/668 (27%), Positives = 300/668 (44%), Gaps = 62/668 (9%)

Query: 47  FMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLE--GELRNLLR 104
           F +  S   + ++ E      L      +P    V ++  + S  SPK E   EL +L  
Sbjct: 17  FSLRGSHQSFNLSSEPHPSSPLPISSTTNPFPELVSKISTILS--SPKWEHSSELCHLSP 74

Query: 105 SLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL 164
            LKP  +  +L++  +    L+FF+W  R+  ++HD   +  ML  L + +L   A  V 
Sbjct: 75  KLKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVR 134

Query: 165 RLMARRGIECRPEA-----------------FSYLMVAYS----RAGK-----LRNAMYV 198
            LM +    CR E                  F Y + +++    + GK     L   MY+
Sbjct: 135 ILMIK---SCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYI 191

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
              M  + + P+LL  NT I++L    ++ +A   +  +      PN  TY  LI G+C 
Sbjct: 192 --KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCR 249

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
            H +  A  + D M   GC P+ V+Y T++  LC E                       G
Sbjct: 250 NHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE-----------------------G 286

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           R+EEA +++ +M Q G  P V TYT  +   C  G   +A ++L +M   GC PN  ++T
Sbjct: 287 RLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFT 346

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           A ++GL  +GK   A  + +    +   P  +TY+ +++ L  EG+   A  + + M+  
Sbjct: 347 ALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSH 406

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P+    N +I+  C  G +  A     + L  G + NV+ + +LI G+C++G+L  A
Sbjct: 407 GSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNA 466

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           + LL+ M      PD  TYT +I   S+ G++E AT L   M+  G+ P  VTY  +I  
Sbjct: 467 MRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           Y  + +V+D L L  KM+      ++  YN +I        + EA    GK+++     +
Sbjct: 527 YFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPN 586

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD--TL 674
             T    ++     G   LA+K+   M  RN  P+L     +   L  EG++E+A+   L
Sbjct: 587 VITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNL 646

Query: 675 MLRFVERG 682
           + R    G
Sbjct: 647 LARLTHYG 654



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 152/517 (29%), Positives = 239/517 (46%), Gaps = 35/517 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQG-----AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
           +P VY   + ++S   LC       A  +L  M +RG     + F+ L+   SR GK   
Sbjct: 304 EPTVYTYTIPLVS---LCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEI 360

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +   M    + P  +  N  I+ L V  +   A    + M   G  P+  TYN +IK
Sbjct: 361 AIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIK 420

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
            +C +  I+ A+ + D+M   G SP+ ++Y T++   CK                     
Sbjct: 421 CFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCK--------------------- 459

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             QG +  A  L+  M   G  PD  TYT +++GF R G+L+ A  +   M  HG  PN 
Sbjct: 460 --QGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+YTA ++G  +  K  +A  +     E    P++ TY+V++ G  +   +SEA +   +
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MVK+G  P  +     I  LCR G+   A K   E   +    N+  ++SLI G CQ+G 
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637

Query: 495 LEEA--LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
            E+A   +LL  +     +P+  TYTT++  L   GR  EA +L++ M  KGL P+   Y
Sbjct: 638 AEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIY 697

Query: 553 RTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           R ++   C+  +VE  L +   M  L  Q   + Y  +I  LC   ++EEA  I   +L 
Sbjct: 698 RALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLE 757

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
               +D     VL++  L +G   L  K+   M +RN
Sbjct: 758 KHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRN 794



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 187/410 (45%), Gaps = 16/410 (3%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           + A  + + M   G     + ++ ++  +   G ++ AM +   M KA  +PN++  NT 
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I+       L  A+R LE M+  G+ P+  TY  LI G+    +++ A  L   M   G 
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKE 325
           SP+ V+Y  ++       ++ +   L  KMV   NL            F     I EA+ 
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
              +M + G +P+V+TYT+ ++G CR G    A K+  +M      PN  +Y++ + GLC
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLC 633

Query: 386 HNGKSLEAREMINTS---EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
             G++ +A EM N           PN  TY+ ++ GL  EG+  EA  +V  M KKG  P
Sbjct: 634 QEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
           +      L+   C+  K++ A          G  +++ ++ +LI   C++  +EEA  + 
Sbjct: 693 SEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIF 752

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
             M     + D V +T ++D L K G  +   +L+  M S+       TY
Sbjct: 753 QTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           I Y  ++    K      A R+L +M   G+  +P+A++Y  L+  +SR GKL +A  + 
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGL--KPDAWTYTELISGFSRGGKLEHATSLF 505

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  ++PN +     I       K+  AL    +M  +G  P+  TYN +I G+   
Sbjct: 506 YGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKT 565

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK---------EVRDLMEKMVND 310
           + I +A     +M  +G  P+ ++Y + +  LC+  R           E R+    +   
Sbjct: 566 NSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTY 625

Query: 311 SNLFH---DQGRIEEAK--ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
           S+L +    +GR E+A+   L+ +++  GC P+V TYT +V G C  G   +A +++  M
Sbjct: 626 SSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSM 685

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G +P+   Y A L G C N K   A  +  + +   +  +   Y  ++  L +E  +
Sbjct: 686 QKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFI 745

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA  + + M++K +    V   +L+  L +EG+ D   K +    ++ C +N   +  L
Sbjct: 746 EEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805

Query: 486 IR 487
            R
Sbjct: 806 AR 807


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 182/668 (27%), Positives = 300/668 (44%), Gaps = 62/668 (9%)

Query: 47  FMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLE--GELRNLLR 104
           F +  S   + ++ E      L      +P    V ++  + S  SPK E   EL +L  
Sbjct: 17  FSLRGSHQSFNLSSEPHPSSPLPISSTTNPFPELVSKISTILS--SPKWEHSSELCHLSP 74

Query: 105 SLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL 164
            LKP  +  +L++  +    L+FF+W  R+  ++HD   +  ML  L + +L   A  V 
Sbjct: 75  KLKPHHVVNILQTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVR 134

Query: 165 RLMARRGIECRPEA-----------------FSYLMVAYS----RAGK-----LRNAMYV 198
            LM +    CR E                  F Y + +++    + GK     L   MY+
Sbjct: 135 ILMIK---SCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYI 191

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
              M  + + P+LL  NT I++L    ++ +A   +  +      PN  TY  LI G+C 
Sbjct: 192 --KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCR 249

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
            H +  A  + D M   GC P+ V+Y T++  LC E                       G
Sbjct: 250 NHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE-----------------------G 286

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           R+EEA +++ +M Q G  P V TYT  +   C  G   +A ++L +M   GC PN  ++T
Sbjct: 287 RLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFT 346

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           A ++GL  +GK   A  + +    +   P  +TY+ +++ L  EG+   A  + + M+  
Sbjct: 347 ALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSH 406

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P+    N +I+  C  G +  A     + L  G + NV+ + +LI G+C++G+L  A
Sbjct: 407 GSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNA 466

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           + LL+ M      PD  TYT +I   S+ G++E AT L   M+  G+ P  VTY  +I  
Sbjct: 467 MRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDG 526

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           Y  + +V+D L L  KM+      ++  YN +I        + EA    GK+++     +
Sbjct: 527 YFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPN 586

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD--TL 674
             T    ++     G   LA+K+   M  RN  P+L     +   L  EG++E+A+   L
Sbjct: 587 VITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNL 646

Query: 675 MLRFVERG 682
           + R    G
Sbjct: 647 LARLTHYG 654



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 152/517 (29%), Positives = 239/517 (46%), Gaps = 35/517 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQG-----AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
           +P VY   + ++S   LC       A  +L  M +RG     + F+ L+   SR GK   
Sbjct: 304 EPTVYTYTIPLVS---LCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEI 360

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +   M    + P  +  N  I+ L V  +   A    + M   G  P+  TYN +IK
Sbjct: 361 AIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIK 420

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
            +C +  I+ A+ + D+M   G SP+ ++Y T++   CK                     
Sbjct: 421 CFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCK--------------------- 459

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             QG +  A  L+  M   G  PD  TYT +++GF R G+L+ A  +   M  HG  PN 
Sbjct: 460 --QGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+YTA ++G  +  K  +A  +     E    P++ TY+V++ G  +   +SEA +   +
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MVK+G  P  +     I  LCR G+   A K   E   +    N+  ++SLI G CQ+G 
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637

Query: 495 LEEA--LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
            E+A   +LL  +     +P+  TYTT++  L   GR  EA +L++ M  KGL P+   Y
Sbjct: 638 AEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIY 697

Query: 553 RTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           R ++   C+  +VE  L +   M  L  Q   + Y  +I  LC   ++EEA  I   +L 
Sbjct: 698 RALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLE 757

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
               +D     VL++  L +G   L  K+   M +RN
Sbjct: 758 KHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRN 794



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 187/410 (45%), Gaps = 16/410 (3%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           + A  + + M   G     + ++ ++  +   G ++ AM +   M KA  +PN++  NT 
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I+       L  A+R LE M+  G+ P+  TY  LI G+    +++ A  L   M   G 
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKE 325
           SP+ V+Y  ++       ++ +   L  KMV   NL            F     I EA+ 
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
              +M + G +P+V+TYT+ ++G CR G    A K+  +M      PN  +Y++ + GLC
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLC 633

Query: 386 HNGKSLEAREMINTS---EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
             G++ +A EM N           PN  TY+ ++ GL  EG+  EA  +V  M KKG  P
Sbjct: 634 QEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
           +      L+   C+  K++ A          G  +++ ++ +LI   C++  +EEA  + 
Sbjct: 693 SEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIF 752

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
             M     + D V +T ++D L K G  +   +L+  M S+       TY
Sbjct: 753 QTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           I Y  ++    K      A R+L +M   G+  +P+A++Y  L+  +SR GKL +A  + 
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGL--KPDAWTYTELISGFSRGGKLEHATSLF 505

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  ++PN +     I       K+  AL    +M  +G  P+  TYN +I G+   
Sbjct: 506 YGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKT 565

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK---------EVRDLMEKMVND 310
           + I +A     +M  +G  P+ ++Y + +  LC+  R           E R+    +   
Sbjct: 566 NSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTY 625

Query: 311 SNLFH---DQGRIEEAK--ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
           S+L +    +GR E+A+   L+ +++  GC P+V TYT +V G C  G   +A +++  M
Sbjct: 626 SSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSM 685

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G +P+   Y A L G C N K   A  +  + +   +  +   Y  ++  L +E  +
Sbjct: 686 QKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFI 745

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA  + + M++K +    V   +L+  L +EG+ D   K +    ++ C +N   +  L
Sbjct: 746 EEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805

Query: 486 IR 487
            R
Sbjct: 806 AR 807


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 187/634 (29%), Positives = 293/634 (46%), Gaps = 47/634 (7%)

Query: 98  ELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
           ELR  L  + P Q+C +L    D   +++ F WA  Q  Y H   VYYM+++ L      
Sbjct: 68  ELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEF 127

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM-YVLSMMQKAAVAPNLLICNT 216
           +    +L  M + GI  R   F  +M  Y RAG    A   +L M    +  P     N 
Sbjct: 128 KTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNV 187

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            + VL+ GN           M   GI+P V T+  ++K  C ++ +  A  L+ +M   G
Sbjct: 188 VLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHG 247

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD--QG-----RIEEAK 324
           C P+ + Y T++  L K  R+ EV  L+E+M     + D N F+D   G     RI EA 
Sbjct: 248 CVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAA 307

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML---------------------- 362
           +LV++M   G  P+  TY  +++G CR+G++D+A+ +L                      
Sbjct: 308 KLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRG 367

Query: 363 ----------QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
                     + M   GC P+  +Y   + GLC  G  + ARE++N  + +   PN ITY
Sbjct: 368 RLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITY 427

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           ++++    +EG+L EA +V+ EM  KG     V  N LI +LC++ K+  A     +  +
Sbjct: 428 TILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSS 487

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           KGC  ++  F SLI G C+    EEAL L  DM L     +T+TY T+I A  + G ++E
Sbjct: 488 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 547

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIE 590
           A +L+  ML +G     +TY  +I   C+ G +E  L L E M+SK       + N +I 
Sbjct: 548 ALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 607

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC  G ++ A + L  ++      D  T + L+      G    A  +  ++    + P
Sbjct: 608 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 667

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           D      +      EG  ++A  L+ R V+ G I
Sbjct: 668 DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFI 701



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 276/551 (50%), Gaps = 13/551 (2%)

Query: 132 DRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           D +  Y  +P    Y ++L++L      +    V   M  +GI      F  +M A    
Sbjct: 171 DMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLV 230

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
            ++ +A  +L  M +    PN ++  T IH L    ++ + L+ LE M L G  P+V T+
Sbjct: 231 NEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTF 290

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N  I G C + RI +A KL+D M L+G +P+  +Y  +M  LC+  ++ E R L+ K+ N
Sbjct: 291 NDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN 350

Query: 310 DS--------NLFHDQGRIEEAKELVNQ-MSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
            +        N +  +GR++EAK ++++ M  +GC PD+ TY  ++ G C+ G L  A++
Sbjct: 351 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 410

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           ++ +M   GC+PN ++YT  ++  C  G+  EAR +++    +    NA+ Y+ ++  L 
Sbjct: 411 LMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALC 470

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           ++ K+ +A ++  +M  KG  P     N LI  LC+  K + A    Q+ L +G   N +
Sbjct: 471 KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 530

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +LI  F ++G ++EAL L++DM       D +TY  +I AL + G +E+   L   M
Sbjct: 531 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 590

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYL 598
           +SKGL P  ++   +I+  C+ G ++  L+ L  M+ +        YN +I  LC  G  
Sbjct: 591 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 650

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           +EA  +  K+       DA T + L+  +  +G+   A+ +  R  +   IP+      +
Sbjct: 651 QEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYIL 710

Query: 659 SERLILEGKSE 669
               I EG  E
Sbjct: 711 VSNFIKEGDQE 721


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 178/639 (27%), Positives = 299/639 (46%), Gaps = 55/639 (8%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           + +L     P+Q+   LR Q DE  AL+ F WA +Q  +     VY  +L  L K    +
Sbjct: 55  VHHLPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFE 114

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ-KAAVAPNLLICNTA 217
             +RVL  M   G E     F   + +Y +       + ++ +M+ +  + P+    N  
Sbjct: 115 YMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVL 174

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           ++VLV  NKL         M    I  +V T+N LIK  C  H+++ AI +++EMP  G 
Sbjct: 175 LNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGL 234

Query: 278 SPDKVSYYTVM-GYL----------------------------------CKEKRIKEVRD 302
           SPD+ ++ T+M GY+                                  CK+ RI +   
Sbjct: 235 SPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALS 294

Query: 303 LMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            +++ V++             N     G  + A E+V+ M   G  PD+ TY ++++G C
Sbjct: 295 FIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLC 354

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           ++GE+++A K+L QM    C PN V+Y A ++ LC   +  EA E+      +   P+  
Sbjct: 355 KLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVC 414

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           T++ ++ GL        A D+  EM  KG  P     N+LI SLC   K++ A   ++E 
Sbjct: 415 TFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM 474

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
              GCA NVV + +LI GFC+   +EEA  + D+M L     D+VTY T+ID L K+ RV
Sbjct: 475 ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRV 534

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQ 587
           E+A +LM +M+ +GL P   TY +++  +C+ G ++    +++ M S   C      Y  
Sbjct: 535 EDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTS-SGCNPDIVTYAT 593

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I  LC  G ++ A ++L  +            + ++++   +     A ++   M +++
Sbjct: 594 LISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKS 653

Query: 648 LIPDLKLCKKVSERLILEGKSE--EADTLMLRFVERGHI 684
             PD  +  K+  R +  G     EA    +  +ERG+I
Sbjct: 654 EPPD-AITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNI 691



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 189/392 (48%), Gaps = 35/392 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y  ++  L K      A  + RL+  +GI      F+ L+     +   ++AM + 
Sbjct: 377 NAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLF 436

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+     P+    N  I  L    KL +AL  L+ M+L G   NV+ YN LI G+C  
Sbjct: 437 EEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKN 496

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            RI++A ++ DEM L+G S D V+Y T++  LCK KR+++   LM++M+ +         
Sbjct: 497 KRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTY 556

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                 F   G I++A ++V  M+  GC PD+VTY  +++G C+ G +  A ++L+ +  
Sbjct: 557 NSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQM 616

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEA----REMINTSEEEWWTPNAITYSVVMHGL-RRE 422
            G      +Y   +  L    ++ EA    REM++ SE     P+AITY +V  GL    
Sbjct: 617 KGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSE----PPDAITYKIVYRGLCNGG 672

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G + EA D   EM+++G  P      +L + LC     D   K +   + K        F
Sbjct: 673 GPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKA------KF 726

Query: 483 T----SLIRGFCQKGDLEEALS----LLDDMY 506
           +    S IRGF +    ++ALS    +LDDMY
Sbjct: 727 SEREISTIRGFLKIRKFQDALSTLGGILDDMY 758


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 159/552 (28%), Positives = 274/552 (49%), Gaps = 52/552 (9%)

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV---VGNKLAKALRFLERMQLAG 241
           AY ++G+  +A  +   M++  + PNLL CNT ++ LV     + ++ +          G
Sbjct: 144 AYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLG 203

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I PNV T+N +I GYC  ++ KDA++ ++ M    CSPD V+Y T++  LCK+ R+ + R
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDAR 263

Query: 302 DLMEKM----------------------------------VNDSNLFHD----------- 316
           DL+  M                                  +  +NL  D           
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323

Query: 317 --QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             +GRIEEA +L ++M  +  +PDVV+Y  ++NG     ++ +A K+L++M   G KPN 
Sbjct: 324 CNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNA 383

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V++   +   C  GK  +A   I   EE  ++P+ +TY+ +++G  + G + EA   + E
Sbjct: 384 VTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M +K      V +N ++++LCRE K++ A K +     +G  ++ V++ +LI G+ + G+
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           ++ AL L D+M   +  P TVTY  II  L + G+ E+A   + ++L  GL+P   TY T
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTA 612
           ++H YC+ G VE   +   KM+        +  N ++  LC  G LE+A K+    +   
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKG 623

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
              D  T + L+ S   +G    A+ +   M  + L PD      +   L   G+  EA+
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE 683

Query: 673 TLMLRFVERGHI 684
             M + +E+G++
Sbjct: 684 EFMSKMLEKGNL 695



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 243/475 (51%), Gaps = 28/475 (5%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  V+ LM +  +   P+ ++Y M+       G++  A  +   M+   + P+++  NT 
Sbjct: 297 AANVIELMTQNNL--LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTL 354

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I+  +  +K+++A + LE M   G+ PN +T+N ++K YC   ++ DA   I +M   G 
Sbjct: 355 INGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF 414

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAK 324
           SPD V+Y T++   CK   + E    M++M    N+  D             + ++EEA 
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEM-GRKNMKMDSVTLNTILRTLCREKKLEEAY 473

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +L++   + G   D V+Y  ++ G+ + G +D+A K+  +M      P+TV+Y   + GL
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  GK+ +A   +N   E    P+  TY+ ++HG  REG + +A     +MV+  F P  
Sbjct: 534 CQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDV 593

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
              N+L++ LC EG ++ A K     ++KG A++ V + +LI   C++G L++A +LL +
Sbjct: 594 FTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M   +  PD  TY  II AL+ +GR+ EA E M KML KG +P  V          Q+ +
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV---------LQLDK 704

Query: 565 VEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            E ++       S      AY++ I+ LC+ G  ++A +I G+  +     D ST
Sbjct: 705 NETVVTSETSEESDSS-SVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKST 758



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 127/272 (46%), Gaps = 28/272 (10%)

Query: 173 ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           E  P   +Y  ++    + GK   A+  L+ + ++ + P+    NT +H       + KA
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKA 577

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
            +F  +M      P+V T N L++G C    ++ A+KL +    KG + D V+Y T++  
Sbjct: 578 FQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITS 637

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
           LCKE R+ +  +L+ +M                    D GRI EA+E +++M + G +PD
Sbjct: 638 LCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPD 697

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
                       +V +LD+ + ++          ++V+Y+ ++  LC  GK  +A  +  
Sbjct: 698 ------------QVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFG 745

Query: 399 TSEEEWWTPNAITYSVVMHGL--RREGKLSEA 428
            S+++  T +  TY  +M GL  RR+    EA
Sbjct: 746 ESKQKGITVDKSTYINLMDGLIKRRKSISKEA 777



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 7/246 (2%)

Query: 156 LCQGAK-----RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           LCQ  K       L  +   G+      ++ ++  Y R G +  A    + M + +  P+
Sbjct: 533 LCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPD 592

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           +  CN  +  L +   L KAL+        G   + +TYN LI   C   R+ DA  L+ 
Sbjct: 593 VFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLS 652

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQM 330
           EM  K   PD  +Y  ++  L    RI+E  + M KM+   NL     ++++ + +V   
Sbjct: 653 EMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSE 712

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
           +        V Y+  +   C  G+   A ++  +    G   +  +Y   ++GL    KS
Sbjct: 713 TSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKS 772

Query: 391 L--EAR 394
           +  EAR
Sbjct: 773 ISKEAR 778


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 171/599 (28%), Positives = 292/599 (48%), Gaps = 58/599 (9%)

Query: 115 LRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIEC 174
           +R  +   +A+QFF WA  Q  Y+HD   Y  +L+IL K+       +V + +   G  C
Sbjct: 1   MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSG--C 58

Query: 175 RPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
            P    F  L+    +AG+   A+  L  + + +VAP++ I N  IH L       +A++
Sbjct: 59  SPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVK 118

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG--CSPDKVSYYTVMGY 290
             E M+ + + P ++TYN +I G C    ++ A +L++EM  KG   +PD V+Y T++  
Sbjct: 119 LFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINA 178

Query: 291 LCKEKRIKEVRDLMEKM----VNDSNLFHD--------QGRIEEAKELVNQMSQMGCIPD 338
             +  RI+E     EKM    +N   L  +         G +EEA E+++ M   G +PD
Sbjct: 179 FYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPD 238

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V+TY ++++  C  G++ +A ++L+ M    C P+ V++   L+G C  G    A E++ 
Sbjct: 239 VITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLE 295

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
               E   P+ ITY+++++GL R G++  A  ++ E+V++G+ P  +    L+  LC+ G
Sbjct: 296 EMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSG 355

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD------------------------ 494
           +++ A K ++E   +GC   VV ++SL+ G+C+ G+                        
Sbjct: 356 EIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYN 415

Query: 495 -----------LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
                      + +A+SL+ D+      PD VTY T+ID L K  RV EA +L  +M S+
Sbjct: 416 IVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASR 475

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEA 601
           G  P  VT  +V+   C+VGRV+D   L+ +M  K+       Y  +I+ LC    +++A
Sbjct: 476 GCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDA 535

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
             +L  +       D      L+ S  + G    A  +   M  R  +PD    K + E
Sbjct: 536 CMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEE 594



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 209/481 (43%), Gaps = 89/481 (18%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLR 193
           R + + + Y  ++  L K+   + A+ +L  M R+G +  P+  +Y  L+ A+ RA ++R
Sbjct: 127 RVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIR 186

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A      M+ A + P++L CN  +  +     + +AL  L+ M+LAG  P+V+TYN +I
Sbjct: 187 EACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSII 246

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
              C   ++ +A +++  M    CSPD V++ T++   CK   +    +++E+M  + N+
Sbjct: 247 HALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE-NI 302

Query: 314 FHD------------------------------------------------QGRIEEAKE 325
             D                                                 G IEEA +
Sbjct: 303 LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 362

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH------------------ 367
           LV +MS  GC   VV Y+++V+G+CR G + +A+++L +M                    
Sbjct: 363 LVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLI 422

Query: 368 -----------------HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
                             G  P+ V+Y   ++GLC   +  EA ++ +        PN +
Sbjct: 423 KDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDV 482

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           T   V+ GL R G++ +A  +V EM +K   P  V    LI  LC+  +MD A   +   
Sbjct: 483 TLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAM 542

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
             +G A++   +  LI      G + EA+++ D+M      PD  T  T+ +A   N   
Sbjct: 543 RGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVF 602

Query: 531 E 531
           E
Sbjct: 603 E 603


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 172/628 (27%), Positives = 299/628 (47%), Gaps = 63/628 (10%)

Query: 115 LRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIEC 174
           LRSQAD+  AL+ F  A ++  +  +P +Y  +L  L ++      +++L  M   G E 
Sbjct: 57  LRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEM 116

Query: 175 RPEAFSYLMVAYSRAGKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
               F  L+ +Y++       + V+  M+    + P+    N  +++LV GN L      
Sbjct: 117 GTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIA 176

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYL- 291
             +M + GI P+V T+N LIK  C  H+++ AI ++++MP  G  PD+ ++ T+M GY+ 
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIE 236

Query: 292 ---------------------------------CKEKRIKEVRDLMEKMVNDSNLFHDQ- 317
                                            CKE R+++  + +++M N    F DQ 
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296

Query: 318 ------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                       G ++ A E+++ M Q G  PDV TY +V++G C++GE+ +A + L QM
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQM 356

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
               C PNTV+Y   ++ LC   +  EA E+      +   P+  T++ ++ GL      
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             A ++  EM  KG  P     N+LI SLC +GK+D A   +++    GCA +V+ + +L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I GFC+   + EA  + D+M +     ++VTY T+ID L K+ RVE+A++LM +M+ +G 
Sbjct: 477 IDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQ 536

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGK 603
            P   TY +++  +C+ G ++    +++ M S   +     Y  +I  LC  G +E A K
Sbjct: 537 KPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN-LIPDLKLCKKVSERL 662
           +L  +            + +++    K     A  +   M  +N   PD      VS R+
Sbjct: 597 LLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPD-----AVSYRI 651

Query: 663 ILE------GKSEEADTLMLRFVERGHI 684
           +        G   EA   ++  +E+G +
Sbjct: 652 VFRGLCNGGGPIREAVDFLVELLEKGFV 679



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 235/490 (47%), Gaps = 29/490 (5%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY-- 181
           AL F      Q  +  D   +  ++  L K    + A  ++ +M + G +  P+ ++Y  
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD--PDVYTYNS 335

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           ++    + G+++ A+  L  M     +PN +  NT I  L   N++ +A      +   G
Sbjct: 336 VISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I P+V T+N LI+G C     + A++L +EM  KGC PD+ +Y  ++  LC         
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS-------- 447

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                          +G+++EA  ++ QM   GC   V+TY  +++GFC+  ++ +A+++
Sbjct: 448 ---------------KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEI 492

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             +M  HG   N+V+Y   ++GLC + +  +A ++++    E   P+  TY+ ++    R
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCR 552

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            G + +A D+V+ M   G  P  V    LI  LC+ G+++ A K ++    KG A+    
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHA 612

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMY-LCKKDPDTVTYTTIIDAL-SKNGRVEEATELMMK 539
           +  +I+G  +K    EA++L  +M    +  PD V+Y  +   L +  G + EA + +++
Sbjct: 613 YNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVE 672

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLE 599
           +L KG VP   +   +      +   E L+KL+  ++ K +       +++ L      +
Sbjct: 673 LLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQ 732

Query: 600 EAGKILGKVL 609
           +A   LG VL
Sbjct: 733 DALATLGGVL 742


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 159/552 (28%), Positives = 273/552 (49%), Gaps = 52/552 (9%)

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV---VGNKLAKALRFLERMQLAG 241
           AY ++G+  +A  +   M++  + PNLL CNT ++ LV     + ++ +          G
Sbjct: 144 AYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLG 203

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I PNV T+N +I GYC  ++ KDA++ ++ M    CSPD V+Y T++  LCK+ R+ + R
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDAR 263

Query: 302 DLMEKM----------------------------------VNDSNLFHD----------- 316
           DL+  M                                  +  +NL  D           
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323

Query: 317 --QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             +GRIEEA +L ++M  +  +PDVV+Y  ++NG     ++ +A K+L++M   G KPN 
Sbjct: 324 CNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNA 383

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V++   +   C  GK  +A   I   EE  ++P+ +TY+ +++G  + G + EA   + E
Sbjct: 384 VTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M +K      V +N ++++LCRE K++ A K +     +G  ++ V++ +LI G+ + G+
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           ++ AL L D+M   +  P TVTY  II  L + G+ E+A   + ++L  GL+P   TY T
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTA 612
           ++H YC+ G VE   +   KM+        +  N ++  LC  G LE+A K+    +   
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKG 623

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
              D  T + L+ S   +G    A+ +   M  + L PD      +   L   G+  EA+
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE 683

Query: 673 TLMLRFVERGHI 684
             M + +E+G +
Sbjct: 684 EFMSKMLEKGXL 695



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 242/475 (50%), Gaps = 28/475 (5%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  V+ LM +  +   P+ ++Y M+       G++  A  +   M+   + P+++  NT 
Sbjct: 297 AANVIELMTQNNL--LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTL 354

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I+  +  +K+++A + LE M   G+ PN +T+N ++K YC   ++ DA   I +M   G 
Sbjct: 355 INGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF 414

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAK 324
           SPD V+Y T++   CK   + E    M++M    N+  D             + ++EEA 
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEM-GRKNMKMDSVTLNTILRTLCREKKLEEAY 473

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +L++   + G   D V+Y  ++ G+ + G +D+A K+  +M      P+TV+Y   + GL
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  GK+ +A   +N   E    P+  TY+ ++HG  REG + +A     +MV+  F P  
Sbjct: 534 CQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDV 593

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
              N+L++ LC EG ++ A K     ++KG A++ V + +LI   C++G L++A +LL +
Sbjct: 594 FTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M   +  PD  TY  II AL+ +GR+ EA E M KML KG +P  V          Q+  
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQV---------LQLDX 704

Query: 565 VEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            E ++       S      AY++ I+ LC+ G  ++A +I G+  +     D ST
Sbjct: 705 NETVVTSETSEESDSS-SVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKST 758



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/328 (21%), Positives = 144/328 (43%), Gaps = 37/328 (11%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D +    +L  L + K  + A ++L    +RG      ++  L+V Y + G +  A+ 
Sbjct: 450 KMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALK 509

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M++  + P+ +  N  I  L    K  +A+  L  +  +G+ P+  TYN ++ GYC
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC 569

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSN 312
               ++ A +  ++M      PD  +   ++  LC E  +++   L    V+     D+ 
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTV 629

Query: 313 LFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            ++        +GR+++A  L+++M +    PD  TY A++      G + +A++ + +M
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689

Query: 366 YHHGCKPN-----------------------TVSYTAFLNGLCHNGKSLEAREMINTSEE 402
              G  P                        +V+Y+ ++  LC  GK  +A  +   S++
Sbjct: 690 LEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQ 749

Query: 403 EWWTPNAITYSVVMHGL--RREGKLSEA 428
           +  T +  TY  +M GL  RR+    EA
Sbjct: 750 KGITVDKSTYINLMDGLIKRRKSISKEA 777



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 7/246 (2%)

Query: 156 LCQGAK-----RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           LCQ  K       L  +   G+      ++ ++  Y R G +  A    + M + +  P+
Sbjct: 533 LCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPD 592

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           +  CN  +  L +   L KAL+        G   + +TYN LI   C   R+ DA  L+ 
Sbjct: 593 VFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLS 652

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQM 330
           EM  K   PD  +Y  ++  L    RI+E  + M KM+    L     +++  + +V   
Sbjct: 653 EMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSE 712

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
           +        V Y+  +   C  G+   A ++  +    G   +  +Y   ++GL    KS
Sbjct: 713 TSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKS 772

Query: 391 L--EAR 394
           +  EAR
Sbjct: 773 ISKEAR 778


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 280/571 (49%), Gaps = 55/571 (9%)

Query: 105 SLKPRQICAVLRSQADERVALQFFYWA-DRQWR--------------------------- 136
           +L+P  +  VL+   D + A+ FF WA DR ++                           
Sbjct: 90  TLQPAVVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFE 149

Query: 137 ------YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
                 Y  D   Y+++++ L +      A  +L     RG +     ++ L  A+ + G
Sbjct: 150 RMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTG 209

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L++A+ +   +     +P+ +  N  IH     N    AL FL+ M    + P+V TYN
Sbjct: 210 RLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYN 265

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI G C   +   A +++ EM  +G +PD V++ ++M  LCK  + +    L+  M   
Sbjct: 266 ILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAER 325

Query: 311 S------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
           +            +    Q  ++ AK+LV++    G +PDVVTY+ + +G C+ G +D+A
Sbjct: 326 NCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEA 385

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            +++++M   GC PN V+Y   ++GLC   K+ +A E++ +     + P+ +TY++++ G
Sbjct: 386 FELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDG 445

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L +EG+L +A  +V  M+K+G  P+ +    L++ LCR G++D A    +E ++K C  +
Sbjct: 446 LCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTAD 505

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            + + SL+ G+C+    +EA  ++D +   +  P    Y  ++D   K GR++E   +  
Sbjct: 506 ALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGYCKEGRLDEIPNVFE 562

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFG 596
            M  +G VP + TY  V+   C+ G+V++    LE M S        +YN +I+ L    
Sbjct: 563 DMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKAS 622

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESY 627
             +EA ++L ++++     DA T + L+  +
Sbjct: 623 KPKEARQVLDQMIQAGIPPDAVTYNTLMAQF 653



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 262/509 (51%), Gaps = 22/509 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++ L K      A  +L  M  RG+      F+ +M    +AGK   A  +L
Sbjct: 260 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 319

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           ++M +    P+    NT I  L     + +A   ++    +G  P+V+TY+ L  G C  
Sbjct: 320 AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKR 379

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD--- 316
            RI +A +L+ EM  KGC+P+ V+Y T++  LCK  + ++  +L+E +V+ S    D   
Sbjct: 380 GRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVS-SGFVPDVVT 438

Query: 317 ----------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                     +GR+++A ++V  M + GC P V+TYTA++ G CR G +D+A  + ++M 
Sbjct: 439 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 498

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
              C  + ++Y + +NG C + ++ EA+++++       TP    Y+ +M G  +EG+L 
Sbjct: 499 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR---GTPYIDVYNALMDGYCKEGRLD 555

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           E  +V  +M  +G  P     N+++  LC+ GK+D A  F++   + GC  +VV++  +I
Sbjct: 556 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 615

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G  +    +EA  +LD M      PD VTY T++    K  R ++A  ++  M+  G+ 
Sbjct: 616 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVD 675

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR----TAYNQVIENLCSFGYLEEAG 602
           P  VTY T+I    Q  R+ D  +L+ +ML +  C     T YN +I+ LC  G L++A 
Sbjct: 676 PDNVTYNTLISGLSQTNRLGDAYELMHEML-RNGCVVSACTTYNTIIDRLCKEGCLKQAL 734

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKG 631
            ++  +     +A+  T ++ ++    +G
Sbjct: 735 LLMDHMTGHGVEANTVTYNIFIDRLCKEG 763



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 161/564 (28%), Positives = 267/564 (47%), Gaps = 44/564 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D I Y  ++    +   C GA   L+ M  R +   P+ F+Y  L+    +A K   A  
Sbjct: 225 DAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVA--PDVFTYNILIDGLCKASKTDKASE 282

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M    V P+ +  N+ +  L    K  +A   L  M      P+  TYN LI G C
Sbjct: 283 MLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLC 342

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
               +  A  L+DE    G  PD V+Y  +   LCK  RI E  +L+++M          
Sbjct: 343 KQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLV 402

Query: 312 --NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             N   D      + E+A EL+  +   G +PDVVTYT +V+G C+ G LD+A KM++ M
Sbjct: 403 TYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM 462

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              GC P+ ++YTA + GLC  G+  EA  +      +  T +A+ Y  +++G  +  + 
Sbjct: 463 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRT 522

Query: 426 SEACDVVREMVKKGFFPTP-VEI-NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
            EA  VV      G   TP +++ N L+   C+EG++D      ++   +GC  N+  + 
Sbjct: 523 KEAQKVV-----DGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYN 577

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            ++ G C+ G ++EA   L+ M+     PD V+Y  IID L K  + +EA +++ +M+  
Sbjct: 578 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA 637

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEA 601
           G+ P  VTY T++ ++C+  R +D + +L+ M+          YN +I  L     L +A
Sbjct: 638 GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDA 697

Query: 602 GKILGKVLRTASKADASTCHVLV------ESYLNKGIPLL----AYKVACRMFNRNLIPD 651
            +++ ++LR      A T +  +      E  L + + L+     + V       N+  D
Sbjct: 698 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFID 757

Query: 652 LKLCKKVSERLILEGKSEEADTLM 675
            +LCK        EG+ +EA +L+
Sbjct: 758 -RLCK--------EGRLDEASSLL 772



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 262/500 (52%), Gaps = 20/500 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y ++ + L K      A  +++ M+ +G  C P   +Y  L+    +A K   A  
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEMSGKG--CTPNLVTYNTLIDGLCKASKTEKAYE 422

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  +  +   P+++     +  L    +L KAL+ +E M   G TP+V+TY  L++G C
Sbjct: 423 LLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLC 482

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSN 312
              R+ +A  +  EM  K C+ D ++Y +++   CK  R KE + +++ +     ++  N
Sbjct: 483 RTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYN 542

Query: 313 LFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
              D    +GR++E   +   M+  GC+P++ TY  V++G C+ G++D+A   L+ M+  
Sbjct: 543 ALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSA 602

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           GC P+ VSY   ++GL    K  EAR++++   +    P+A+TY+ +M    +E +  +A
Sbjct: 603 GCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDA 662

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV-VNFTSLIR 487
             +++ M+K G  P  V  N LI  L +  ++  A + M E L  GC V+    + ++I 
Sbjct: 663 VGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIID 722

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
             C++G L++AL L+D M     + +TVTY   ID L K GR++EA+ L+ +M +   + 
Sbjct: 723 RLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT---LR 779

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLS-KQKCRTA--YNQVIENLCSFGYLEEAGKI 604
             V+Y TVI   C+  +++   KL  +M++ K  C T+  +N +I+       L+EA  +
Sbjct: 780 DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTL 839

Query: 605 LGKVLRTASKADASTCHVLV 624
           LG +++        T ++++
Sbjct: 840 LGLMVQRGCSPSVITYNMVI 859



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 210/442 (47%), Gaps = 35/442 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP--EAFSYLMVAYSRAGKLRNAMY 197
           D + Y  ++    K+   + A++V+      GI   P  + ++ LM  Y + G+L     
Sbjct: 505 DALAYVSLVNGYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDGYCKEGRLDEIPN 559

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   M      PN+   N  +  L    K+ +A  FLE M  AG  P+V++YN +I G  
Sbjct: 560 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 619

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              + K+A +++D+M   G  PD V+Y T+M   CKE+R  +   +++ M+         
Sbjct: 620 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI--------- 670

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT-VS 376
                         + G  PD VTY  +++G  +   L  A +++ +M  +GC  +   +
Sbjct: 671 --------------KAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTT 716

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   ++ LC  G   +A  +++         N +TY++ +  L +EG+L EA  ++ EM 
Sbjct: 717 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM- 775

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN-KGCAVNVVNFTSLIRGFCQKGDL 495
                   V    +I  LC+  ++D A K  +E +  KG  +    F  LI  F +   L
Sbjct: 776 --DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRL 833

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           +EAL+LL  M      P  +TY  +I  L K  +V++A EL  +M  +G+V + V+Y  +
Sbjct: 834 DEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVL 893

Query: 556 IHRYCQVGRVEDLLKLLEKMLS 577
           I+  C  GR ++ L++LE+M S
Sbjct: 894 IYGLCGQGRGKEALQVLEEMAS 915



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 174/369 (47%), Gaps = 8/369 (2%)

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
           + G  +    +  +M   G  PD  TY  V+   C++ ++D+A  ML +    G KP   
Sbjct: 137 ENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVS 196

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            YT      C  G+  +A E+         +P+AI Y+ ++HG  R+     A + ++EM
Sbjct: 197 VYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEM 252

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            ++   P     N+LI  LC+  K D A + + E +++G   + V F S++ G C+ G  
Sbjct: 253 NERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKF 312

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           E A SLL  M      P   TY T+I  L K   V+ A +L+ + +S G VP VVTY  +
Sbjct: 313 ERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSIL 372

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
               C+ GR+++  +L+++M S + C      YN +I+ LC     E+A ++L  ++ + 
Sbjct: 373 ADGLCKRGRIDEAFELVKEM-SGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG 431

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
              D  T  ++V+    +G    A K+   M  R   P +     + E L   G+ +EA 
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 491

Query: 673 TLMLRFVER 681
            +    V +
Sbjct: 492 HIFKEMVSK 500



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 171/352 (48%), Gaps = 21/352 (5%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLS 200
            Y ++++ L K      A   L  M   G  C P+  SY ++     +A K + A  VL 
Sbjct: 575 TYNIVMDGLCKHGKVDEAFPFLESMHSAG--CVPDVVSYNIIIDGLFKASKPKEARQVLD 632

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M +A + P+ +  NT +       +   A+  L+ M  AG+ P+ +TYN LI G    +
Sbjct: 633 QMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 692

Query: 261 RIKDAIKLIDEMPLKGCSPDK-VSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
           R+ DA +L+ EM   GC      +Y T++  LCKE  +K+   LM+ M            
Sbjct: 693 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 752

Query: 312 NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N+F D    +GR++EA  L   +S+M  + D V+YT V+ G C+  +LD+A K+ ++M  
Sbjct: 753 NIFIDRLCKEGRLDEASSL---LSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVA 809

Query: 368 -HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G    + ++   ++      +  EA  ++    +   +P+ ITY++V+  L +  K+ 
Sbjct: 810 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVD 869

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           +A ++  EM  +G   + V   +LI  LC +G+   A + ++E  +  C ++
Sbjct: 870 KAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 921



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 153/319 (47%), Gaps = 8/319 (2%)

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G K +T +   FL  L  NG S     M     +  + P++ TY +V+  L +  ++ +A
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             ++ +   +GF P      +L ++ C+ G++  A +  +   +     + + + ++I G
Sbjct: 180 FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSP----DAIAYNAIIHG 235

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C+K D + AL  L +M   K  PD  TY  +ID L K  + ++A+E++ +M+ +G+ P 
Sbjct: 236 HCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPD 295

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKIL 605
            VT+ +++   C+ G+ E    LL  M +++ CR +   YN +I  LC    ++ A  ++
Sbjct: 296 TVTFNSIMDGLCKAGKFERAHSLLAVM-AERNCRPSCCTYNTLISGLCKQQNVDRAKDLV 354

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            + + +    D  T  +L +    +G    A+++   M  +   P+L     + + L   
Sbjct: 355 DEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKA 414

Query: 666 GKSEEADTLMLRFVERGHI 684
            K+E+A  L+   V  G +
Sbjct: 415 SKTEKAYELLESLVSSGFV 433



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 108/249 (43%), Gaps = 6/249 (2%)

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +GF  +    N  +Q+L   G  D      +  L+ G A +   +  +I+  CQ   +++
Sbjct: 119 RGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDK 178

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A ++LD   +    P+   YT +  A  K GR+++A E+   + S    P  + Y  +IH
Sbjct: 179 AFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIH 234

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
            +C+    +  L+ L++M  ++       YN +I+ LC     ++A ++L +++      
Sbjct: 235 GHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTP 294

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           D  T + +++     G    A+ +   M  RN  P       +   L  +   + A  L+
Sbjct: 295 DTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLV 354

Query: 676 LRFVERGHI 684
             FV  G +
Sbjct: 355 DEFVSSGFV 363



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 77/149 (51%), Gaps = 1/149 (0%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLR-LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           D + Y  ++  L K +    A ++ R ++A +G+      F+ L+ A+++  +L  A+ +
Sbjct: 780 DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTL 839

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L +M +   +P+++  N  I  L   +K+ KA    + M + GI  + ++Y  LI G C 
Sbjct: 840 LGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCG 899

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
             R K+A+++++EM    C  D + +  V
Sbjct: 900 QGRGKEALQVLEEMASSDCEIDDLKWEDV 928


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 159/519 (30%), Positives = 264/519 (50%), Gaps = 11/519 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y ++L+IL        A  V   M  +G+      F  +M A     ++ NA  +L  M 
Sbjct: 176 YNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMT 235

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           K    PN ++  T IH L   +++ +AL+ LE M L G  P+V T+N +I G C L+RI 
Sbjct: 236 KHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIH 295

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NLFH 315
           +  KL+D M  +G +P+ ++Y  +M  LC+  ++ E + L+ K+   +        N + 
Sbjct: 296 EGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYV 355

Query: 316 DQGRIEEAKE-LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             GR++EA   L ++M + GC PDV T+  +++G C+ G +  A  M+  M  +GC PN 
Sbjct: 356 KSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNL 415

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           ++YT  L+G C   +  EA  ++N    + +  N + Y+V++  L + GK+ +A D++ E
Sbjct: 416 ITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGE 475

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M  KG  P     N LI  LC+  + + A    ++ L  G   N V + +LI  F + G 
Sbjct: 476 MSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGA 535

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           ++EAL L++DM       D +TY  +I A  K G  E+A  L  +M+ K LVP+ ++   
Sbjct: 536 IQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNL 595

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I+  C+VG+V + L+LL  M+ +        YN +I  LC  G + EA  +  K+    
Sbjct: 596 LINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEG 655

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            + DA T + L+  +   G+   AY +  R      IP+
Sbjct: 656 IQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPN 694



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 170/589 (28%), Positives = 280/589 (47%), Gaps = 31/589 (5%)

Query: 98  ELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
           ELR     + P Q+C +L    D   ++  F WA  Q  Y H   VY+++++ L   K  
Sbjct: 59  ELRRSFNQITPFQLCKLLLLPLDVSTSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEF 118

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA-AVAPNLLICNT 216
           +   ++L  +   GI  R   F  +M  Y RA     A  +L  M+      P     N 
Sbjct: 119 KVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNV 178

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            + +LV  N  + A      M   G+ P V T+  ++K  C ++ + +A  L+ +M   G
Sbjct: 179 VLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHG 238

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI 336
           C P+ V Y T++  L K       RD                R+ EA +L+ +M  MGC+
Sbjct: 239 CVPNSVVYQTLIHALSK-------RD----------------RVNEALKLLEEMFLMGCL 275

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PDV T+  V+ G CR+  + +  K++ +M   G  PN ++Y   +NGLC  GK  EA+ +
Sbjct: 276 PDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVL 335

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE-MVKKGFFPTPVEINLLIQSLC 455
           +N       TPN + ++++++G  + G+L EA   + + M+K G  P     N LI  LC
Sbjct: 336 LNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLC 391

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           ++G M  A   + +    GC  N++ +T+L+ GFC+K  LEEA  +L++M     + + +
Sbjct: 392 KKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIM 451

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            Y  ++ AL KNG+V +A +++ +M  KG  P + T+ T+I   C+V R ED L L   M
Sbjct: 452 GYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDM 511

Query: 576 LSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           L          YN +I      G ++EA K++  +L      D  T + L++++   G  
Sbjct: 512 LLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGAT 571

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             A  +   M  ++L+P    C  +   L   GK   A  L+   + RG
Sbjct: 572 EKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRG 620



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 164/349 (46%), Gaps = 16/349 (4%)

Query: 167 MARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           M + G  CRP+ F++  L+    + G + +A+ +++ M      PNL+   T +      
Sbjct: 371 MIKNG--CRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKK 428

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           N+L +A   L  M   G   N++ YN L++  C   ++  A+ ++ EM  KGC PD  ++
Sbjct: 429 NQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTF 488

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
            T++  LCK  R ++   L   M+ D             + F   G I+EA +LVN M  
Sbjct: 489 NTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLF 548

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            GC  D +TY  ++  FC++G  ++A  +  +M      P+ +S    +NGLC  GK   
Sbjct: 549 RGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCN 608

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A E++         P+ +TY+ +++GL + G + EA ++  ++  +G  P  +  N LI 
Sbjct: 609 ALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLIC 668

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
             CR G  D A   +   +      N V +  L+  F ++   E  +S 
Sbjct: 669 WHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENGISF 717


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 178/651 (27%), Positives = 305/651 (46%), Gaps = 62/651 (9%)

Query: 105 SLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           +  P Q+   LR + D    +  FYWA +Q  ++    ++  +L  L K       K +L
Sbjct: 53  NFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDIL 112

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAM-YVLSMMQKAAVAPNLLICNTAIHVLVV 223
           + M         ++    + +Y+  G     + +V +M  +  V  N    N  ++VLV 
Sbjct: 113 KEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVD 172

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
           GNKL         M   GI P+V T+N LIK  C  H+I+ AI L++EM   G  PD+ +
Sbjct: 173 GNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKT 232

Query: 284 YYTVM-GYL----------------------------------CKEKRIKEVRDLMEKMV 308
           + T+M G++                                  CKE RI+E    +E+M 
Sbjct: 233 FTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMS 292

Query: 309 NDSNLFHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                F D+             G ++ A E+++ M + G  PD+ TY ++++G C++GE+
Sbjct: 293 LREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEV 352

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D+A K+L QM    C PNTV+Y   ++ LC   +  EA ++      +   P+  TY+ +
Sbjct: 353 DEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSL 412

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + GL      + A ++ +EM  KG  P     N+LI SLC  GK+  A   ++E    GC
Sbjct: 413 IQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGC 472

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
           A NV+ + +LI GFC+   + EA  + D M L     ++VTY T+ID L K+ RVEEA++
Sbjct: 473 ARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQ 532

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
           LM +M+ +GL P   TY +++  +C+ G ++    +++ M S   +     Y  +I  LC
Sbjct: 533 LMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLC 592

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
             G +E A K+L  +            + ++++   +       K A R+F R +I   +
Sbjct: 593 KAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRK----RSKEAVRLF-REMIEKAE 647

Query: 654 LCKKVSERLILEGKSE------EADTLMLRFVERGHIQPKSEEHLQRQRVF 698
               V+ +++  G  +      EA   ++  +ERG++   S  ++  + +F
Sbjct: 648 APDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLF 698



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 237/489 (48%), Gaps = 28/489 (5%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY-- 181
           AL+F      +  +  D   + M++  LSKT   + A  V+ +M R G +  P+ ++Y  
Sbjct: 284 ALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD--PDIYTYNS 341

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+    + G++  A+ VL+ M +   +PN +  NT I  L   N++ +A +    +   G
Sbjct: 342 LISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKG 401

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I P+V TYN LI+G C       A++L  EM  KGC PD+ +Y  ++  LC         
Sbjct: 402 ILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCF-------- 453

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                          +G+++EA  L+ +M   GC  +V+TY  +++GFC+   + +A+++
Sbjct: 454 ---------------RGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEI 498

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             QM   G   N+V+Y   ++GLC + +  EA ++++    E   P+  TY+ ++    +
Sbjct: 499 FDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCK 558

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            G + +A D+V+ M   G  P  V    LI  LC+ G+++ A K ++    KG  +    
Sbjct: 559 AGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHA 618

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG-RVEEATELMMKM 540
           +  +I+   ++   +EA+ L  +M    + PD VTY  +   L + G  + EA + +M+M
Sbjct: 619 YNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEM 678

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEE 600
           L +G VP   ++  +      +  V  L+KL++ ++ K K       +I         ++
Sbjct: 679 LERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEVTMIRGFLKISKYQD 738

Query: 601 AGKILGKVL 609
           A   LG +L
Sbjct: 739 ALATLGGIL 747


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 163/536 (30%), Positives = 270/536 (50%), Gaps = 21/536 (3%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           ++D  +  Q F  A +   Y+     +Y ++E  + +       +V   M R       +
Sbjct: 41  ESDAPIPDQIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEK 100

Query: 178 AFSYLMVAYSRAGKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
            F  +  AY +A     A+ +   M+ +      +   N+ ++V++      +AL F E 
Sbjct: 101 NFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYE- 159

Query: 237 MQLAG---ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
             + G   I+PNVL++N +IK  C L  +  AI++  EM ++ C PD  +Y T+M  LCK
Sbjct: 160 CGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCK 219

Query: 294 EKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
           E RI E   L+++M  +             N    +G +    +LV+ M   GC+P+ VT
Sbjct: 220 EDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVT 279

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y  ++NG C  G+LD+A  +L +M    C PN V+Y   +NGL   G+S++   ++++ E
Sbjct: 280 YNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLE 339

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           E     N   YS ++ GL +E K  EA  + ++MV+KG  P  V  + LI  LCREGK+D
Sbjct: 340 ERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLD 399

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            AK+ + E +NKGC  N   ++SLI+GF + G+ ++A+ +  +M      P+ + Y+ +I
Sbjct: 400 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 459

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--- 578
             L ++G++ EA  +   ML +GL P VV Y ++IH  C  G VE  LKL  +ML +   
Sbjct: 460 HGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESD 519

Query: 579 -QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
            Q     YN ++  LC    +  A  +L  +L      D  TC++ + +   K  P
Sbjct: 520 SQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNP 575



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 168/334 (50%), Gaps = 8/334 (2%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G ++ A E+  +M+   C PDV TY  +++G C+   +D+A  +L +M   GC P++V++
Sbjct: 186 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 245

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              +NGLC  G  +   ++++    +   PN +TY+ +++GL  +GKL +A  ++  MV 
Sbjct: 246 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 305

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
               P  V    LI  L ++G+       +     +G   N   +++LI G  ++   EE
Sbjct: 306 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE 365

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A+ L   M      P+ V Y+ +ID L + G+++EA E++ +M++KG  P   TY ++I 
Sbjct: 366 AMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIK 425

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
            + + G  +  +++ ++M +K  C      Y+ +I  LC  G L EA  +   +L    +
Sbjct: 426 GFFKTGNSQKAIRVWKEM-AKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLR 484

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
            D      ++    N G    + +V  ++FN  L
Sbjct: 485 PDVVAYSSMIHGLCNAG----SVEVGLKLFNEML 514



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 179/372 (48%), Gaps = 15/372 (4%)

Query: 321 EEAKELVNQM-SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC------KPN 373
           E+A EL  +M  +  C   V ++ +V+N   + G   +A     + Y  G        PN
Sbjct: 116 EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRA----LEFYECGVGGKTNISPN 171

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            +S+   +  +C  G    A E+      +   P+  TY  +M GL +E ++ EA  ++ 
Sbjct: 172 VLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLD 231

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM  +G FP+ V  N+LI  LC++G M    K +     KGC  N V + ++I G C KG
Sbjct: 232 EMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKG 291

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            L++A+SLLD M   K  P+ VTY T+I+ L K GR  +   L+  +  +G       Y 
Sbjct: 292 KLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYS 351

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           T+I    +  + E+ + L +KM+ K  Q     Y+ +I+ LC  G L+EA +IL +++  
Sbjct: 352 TLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK 411

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV-SERLILEGKSEE 670
               +A T   L++ +   G    A +V   M   N +P+ ++C  V    L  +GK  E
Sbjct: 412 GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN-EICYSVLIHGLCEDGKLRE 470

Query: 671 ADTLMLRFVERG 682
           A  +    + RG
Sbjct: 471 AMMMWTHMLGRG 482



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 37/240 (15%)

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKG---CAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            N ++  + +EG    A +F  EC   G    + NV++F  +I+  C+ G ++ A+ +  
Sbjct: 138 FNSVLNVIIQEGLFHRALEFY-ECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 196

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M + K +PD  TY T++D L K  R++EA  L+ +M  +G  P+ VT+           
Sbjct: 197 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF----------- 245

Query: 564 RVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
                                 N +I  LC  G +    K++  +       +  T + +
Sbjct: 246 ----------------------NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 283

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +     KG    A  +  RM     +P+      +   L+ +G+S +   L+    ERGH
Sbjct: 284 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 343



 Score = 40.8 bits (94), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 79/184 (42%), Gaps = 23/184 (12%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y +++  L +    + A  +   M  RG+     A+S ++     AG +   + + + 
Sbjct: 453 ICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNE 512

Query: 202 M--QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG---- 255
           M  Q++   P+++  N  +  L   N ++ A+  L  M   G  P+++T N  +      
Sbjct: 513 MLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREK 572

Query: 256 ---------YCD-----LH---RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
                    + D     LH   RI  A K+I+ M  K   P+  ++  ++  LCK K+++
Sbjct: 573 LNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 632

Query: 299 EVRD 302
            + D
Sbjct: 633 AIID 636


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 166/546 (30%), Positives = 274/546 (50%), Gaps = 23/546 (4%)

Query: 108 PRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLM 167
           PR++ +V RS       +  F  A +   Y+     +Y ++E  + +       +V   M
Sbjct: 49  PRRVVSVSRSFLQSETYI--FKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRM 106

Query: 168 ARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVVGNK 226
            R       + F  +  AY +A     A+ +   M+ +      +   N+ ++V++    
Sbjct: 107 KRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGL 166

Query: 227 LAKALRFLERMQLAG---ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
             +AL F E   + G   I+PNVL++N +IK  C L  +  AI++  EM ++ C PD  +
Sbjct: 167 FHRALEFYE-CGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFT 225

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMS 331
           Y T+M  LCKE RI E   L+++M  +             N    +G +    +LV+ M 
Sbjct: 226 YCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMF 285

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
             GC+P+ VTY  ++NG C  G+LD+A  +L +M    C PN V+Y   +NGL   G+S+
Sbjct: 286 LKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSV 345

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           +   ++++ EE     N   YS ++ GL +E K  EA  + ++MV+KG  P  V  + LI
Sbjct: 346 DGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALI 405

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LCREGK+D AK+ + E +NKGC  N   ++SLI+GF + G+ ++A+ +  +M      
Sbjct: 406 DGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCV 465

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P+ + Y+ +I  L ++G++ EA  +   ML +GL P VV Y ++IH  C  G VE  LKL
Sbjct: 466 PNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKL 525

Query: 572 LEKMLSK----QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
             +ML +    Q     YN ++  LC    +  A  +L  +L      D  TC++ + + 
Sbjct: 526 FNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585

Query: 628 LNKGIP 633
             K  P
Sbjct: 586 REKLNP 591



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 168/334 (50%), Gaps = 8/334 (2%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G ++ A E+  +M+   C PDV TY  +++G C+   +D+A  +L +M   GC P++V++
Sbjct: 202 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 261

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              +NGLC  G  +   ++++    +   PN +TY+ +++GL  +GKL +A  ++  MV 
Sbjct: 262 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 321

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
               P  V    LI  L ++G+       +     +G   N   +++LI G  ++   EE
Sbjct: 322 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE 381

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A+ L   M      P+ V Y+ +ID L + G+++EA E++ +M++KG  P   TY ++I 
Sbjct: 382 AMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIK 441

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
            + + G  +  +++ ++M +K  C      Y+ +I  LC  G L EA  +   +L    +
Sbjct: 442 GFFKTGNSQKAIRVWKEM-AKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLR 500

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
            D      ++    N G    + +V  ++FN  L
Sbjct: 501 PDVVAYSSMIHGLCNAG----SVEVGLKLFNEML 530



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 179/372 (48%), Gaps = 15/372 (4%)

Query: 321 EEAKELVNQM-SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC------KPN 373
           E+A EL  +M  +  C   V ++ +V+N   + G   +A     + Y  G        PN
Sbjct: 132 EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRA----LEFYECGVGGKTNISPN 187

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            +S+   +  +C  G    A E+      +   P+  TY  +M GL +E ++ EA  ++ 
Sbjct: 188 VLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLD 247

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM  +G FP+ V  N+LI  LC++G M    K +     KGC  N V + ++I G C KG
Sbjct: 248 EMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKG 307

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            L++A+SLLD M   K  P+ VTY T+I+ L K GR  +   L+  +  +G       Y 
Sbjct: 308 KLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYS 367

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           T+I    +  + E+ + L +KM+ K  Q     Y+ +I+ LC  G L+EA +IL +++  
Sbjct: 368 TLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK 427

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV-SERLILEGKSEE 670
               +A T   L++ +   G    A +V   M   N +P+ ++C  V    L  +GK  E
Sbjct: 428 GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN-EICYSVLIHGLCEDGKLRE 486

Query: 671 ADTLMLRFVERG 682
           A  +    + RG
Sbjct: 487 AMMMWTHMLGRG 498



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 37/240 (15%)

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKG---CAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            N ++  + +EG    A +F  EC   G    + NV++F  +I+  C+ G ++ A+ +  
Sbjct: 154 FNSVLNVIIQEGLFHRALEFY-ECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 212

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M + K +PD  TY T++D L K  R++EA  L+ +M  +G  P+ VT+           
Sbjct: 213 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF----------- 261

Query: 564 RVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
                                 N +I  LC  G +    K++  +       +  T + +
Sbjct: 262 ----------------------NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 299

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +     KG    A  +  RM     +P+      +   L+ +G+S +   L+    ERGH
Sbjct: 300 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 359



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 79/184 (42%), Gaps = 23/184 (12%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y +++  L +    + A  +   M  RG+     A+S ++     AG +   + + + 
Sbjct: 469 ICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNE 528

Query: 202 M--QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG---- 255
           M  Q++   P+++  N  +  L   N ++ A+  L  M   G  P+++T N  +      
Sbjct: 529 MLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREK 588

Query: 256 ---------YCD-----LH---RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
                    + D     LH   RI  A K+I+ M  K   P+  ++  ++  LCK K+++
Sbjct: 589 LNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648

Query: 299 EVRD 302
            + D
Sbjct: 649 AIID 652


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 262/512 (51%), Gaps = 38/512 (7%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G+L      L  M      P+++ C T I       K  KA + LE ++ +G  P+V+
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVI 173

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN +I GYC    I +A+ ++D M +   SPD V+Y T++  LC               
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLC--------------- 215

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                   D G++++A E++++M Q  C PDV+TYT ++   CR   + QA K+L +M  
Sbjct: 216 --------DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRD 267

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+ V+Y   +NG+C  G+  EA + +N        PN IT+++++  +   G+  +
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++ +M++KGF P+ V  N+LI  LCR+G +  A   +++    GC  N +++  L+ 
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLH 387

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC++  ++ A+  L+ M      PD VTY T++ AL K+G+VE+A E++ ++ SKG  P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            ++TY TVI    + G+    +KLL++M +K  +     Y+ ++  L   G ++EA K  
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507

Query: 606 GKVLRTASKADASTCHVLV-----ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
            +  R   + +A T + ++         ++ I  L Y     M NR   P       + E
Sbjct: 508 HEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVY-----MINRGCKPTETSYTILIE 562

Query: 661 RLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
            L  EG ++EA  L+     +G ++  S E +
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKRSSAEQV 594



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 243/453 (53%), Gaps = 32/453 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A ++L ++   G    P+  +Y  ++  Y +AG++ NA+ VL  M   +V+P+++  NT 
Sbjct: 156 AAKILEVLEGSG--AVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTI 210

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +  L    KL +A+  L+RM      P+V+TY  LI+  C    +  A+KL+DEM  +GC
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGC 270

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
           +PD V+Y  ++  +CKE                       GR++EA + +N M   GC P
Sbjct: 271 TPDVVTYNVLVNGICKE-----------------------GRLDEAIKFLNDMPSSGCQP 307

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           +V+T+  ++   C  G    A+K+L  M   G  P+ V++   +N LC  G    A +++
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
               +    PN+++Y+ ++HG  +E K+  A + +  MV +G +P  V  N ++ +LC++
Sbjct: 368 EKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           GK++ A + + +  +KGC+  ++ + ++I G  + G   +A+ LLD+M      PDT+TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           ++++  LS+ G+V+EA +   +    G+ P  VT+ +++   C+  + +  +  L  M++
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMIN 547

Query: 578 K--QKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
           +  +   T+Y  +IE L   G  +EA ++L ++
Sbjct: 548 RGCKPTETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 215/421 (51%), Gaps = 19/421 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D I Y +M+    K      A  VL  M+       P+  +Y  ++ +   +GKL+ AM 
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS-----VSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL  M +    P+++     I      + + +A++ L+ M+  G TP+V+TYN L+ G C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              R+ +AIK +++MP  GC P+ +++  ++  +C   R  +   L+  M+         
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 N    +G +  A +++ +M + GC P+ ++Y  +++GFC+  ++D+A + L++M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              GC P+ V+Y   L  LC +GK  +A E++N    +  +P  ITY+ V+ GL + GK 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A  ++ EM  K   P  +  + L+  L REGK+D A KF  E    G   N V F S+
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSI 525

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           + G C+    + A+  L  M      P   +YT +I+ L+  G  +EA EL+ ++ +KGL
Sbjct: 526 MLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585

Query: 546 V 546
           +
Sbjct: 586 M 586



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 121/237 (51%), Gaps = 7/237 (2%)

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L R G+L E    +  MV  G  P  +    LI+  CR GK   A K ++     G   +
Sbjct: 112 LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPD 171

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           V+ +  +I G+C+ G++  ALS+LD M +    PD VTY TI+ +L  +G++++A E++ 
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSF 595
           +ML +   P V+TY  +I   C+   V   +KLL++M  +  C      YN ++  +C  
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDR-GCTPDVVTYNVLVNGICKE 287

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           G L+EA K L  +  +  + +  T ++++ S  + G  + A K+   M  +   P +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 1/186 (0%)

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           +R   + G+LEE    L++M      PD +  TT+I    + G+  +A +++  +   G 
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
           VP V+TY  +I  YC+ G + + L +L++M       T YN ++ +LC  G L++A ++L
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVT-YNTILRSLCDSGKLKQAMEVL 227

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            ++L+     D  T  +L+E+         A K+   M +R   PD+     +   +  E
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287

Query: 666 GKSEEA 671
           G+ +EA
Sbjct: 288 GRLDEA 293


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 270/527 (51%), Gaps = 20/527 (3%)

Query: 66  VVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVAL 125
           VV +ED      V ++C+ IE    W    +  L ++ + L P  +  VL  Q D + AL
Sbjct: 147 VVQQEDT-----VNKICKAIE-EDQWECLQDNFLNSMAQDLNPDAVVKVLNLQTDAQNAL 200

Query: 126 QFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA 185
           +FF WAD+Q  Y H+   Y+ M++IL + K+    + +L+ M  +G E         +++
Sbjct: 201 RFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMS 260

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLL--ICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
           Y R+G+ + ++   ++M++    P L+    N+ +  LV   KL  A     +M   G++
Sbjct: 261 YGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVS 320

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
            N LTY  +I+ +    +++DA+KL+D+M     +PD V+Y  V+  LCK K I++   +
Sbjct: 321 CNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGV 380

Query: 304 MEKMVNDS---NLFHD----QG-----RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           ++KM  +    N++      QG     R EEA ELV  M Q G  P++ TYT + +G C+
Sbjct: 381 LQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCK 440

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
           +  LD+AK+M  +    G KPN V+Y   LNG C   + +EA +++    +   TP+ +T
Sbjct: 441 LRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVT 500

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+ ++ GL +  +L +A  +  EM  KG+      +N+L + L R G    A  F +   
Sbjct: 501 YTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMK 560

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
           ++G A +  ++   I      G++EEA +LL +M      P+  TY T+I    + GR++
Sbjct: 561 DRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLD 620

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           +A  ++  M+  G+ P   +Y  +I  +   GR +D  +L    L +
Sbjct: 621 DADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALER 667



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 167/383 (43%), Gaps = 47/383 (12%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  +L  L K K    A+ +   M   G+ C    ++ ++  +    K+ +AM +L  M
Sbjct: 290 AYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDM 349

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            +   AP+++     I  L     + +A   L++M+  G  PN+ TYN LI+G C + R 
Sbjct: 350 IQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRP 409

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----------- 311
           ++A++L+  M   G  P+  +Y  +   LCK +R+   +++  + +              
Sbjct: 410 EEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTL 469

Query: 312 -NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            N +    R+ EA +++ +M Q  C PD VTYT ++ G  +  +L  A +M  +M + G 
Sbjct: 470 LNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGY 529

Query: 371 KPNTVSYTAFLNGLC----HNGKSLEAREM------------------INTSEE------ 402
             N  +      GL     H   S+  R M                  ++T+ E      
Sbjct: 530 DVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQA 589

Query: 403 -------EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
                  + ++PN  TY+ ++ G  R+G+L +A  ++  M++ G  P     N+LI+   
Sbjct: 590 LLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFH 649

Query: 456 REGKMDGAKKFMQECLNKGCAVN 478
            +G+   A +     L +G  +N
Sbjct: 650 NQGRTQDADQLYATALERGVVLN 672



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 109/479 (22%), Positives = 206/479 (43%), Gaps = 67/479 (13%)

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAG--ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           T I +L       +    L++MQ  G  IT ++L  +  +  Y    R K++++  + M 
Sbjct: 221 TMIDILGRAKMFTELQSLLQKMQTQGREITRSML--HSFVMSYGRSGRFKESLEAFNLMK 278

Query: 274 LKGCSPDKV--SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMS 331
             G  P  +  +Y +V+  L K K++    +L  +M+N+                     
Sbjct: 279 EMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINN--------------------- 317

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
             G   + +TYT+++  F    +++ A K+L  M  +   P+ V+YT  ++ LC      
Sbjct: 318 --GVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIE 375

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           +A  ++    E    PN  TY+ ++ GL    +  EA ++V  M + G  P      +L 
Sbjct: 376 QAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILT 435

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LC+  ++D AK+   E L +G   N V + +L+ G+C+   L EA+ +L +M+     
Sbjct: 436 HGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCT 495

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD VTYTT+I  L +  ++ +A  +  +M +KG      T   +     +VG  +D    
Sbjct: 496 PDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIF 555

Query: 572 LEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
             +M  +    +A  Y   I  L + G +EEA  +L +++      + +T + +++ +  
Sbjct: 556 YRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGF-- 613

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
                      CR                      +G+ ++AD ++   +E G I P +
Sbjct: 614 -----------CR----------------------QGRLDDADAMLNFMIENG-IGPDT 638



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 160/360 (44%), Gaps = 30/360 (8%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGK 191
           Q  Y  D + Y +++  L K K+ + A  VL+ M   G  C P  ++Y  L+       +
Sbjct: 351 QNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENG--CEPNIYTYNALIQGLCAVRR 408

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
              A+ ++++M++  V PN+       H L    +L +A          G+ PN +TYN 
Sbjct: 409 PEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNT 468

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEKMV 308
           L+ GYC   R+ +A+ ++ EM    C+PD V+Y T++  L +  ++ +   + D ME   
Sbjct: 469 LLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKG 528

Query: 309 NDSNL---------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
            D N              G  ++A     +M   G       Y   ++     GE+++A+
Sbjct: 529 YDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQ 588

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            +L +M + G  PN  +Y   + G C  G+  +A  M+N   E    P+  +Y++++   
Sbjct: 589 ALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEF 648

Query: 420 RREGKLSEACDVVREMVKKGFF--PTPV--EINLLIQSLCREGKMDGAKKFMQECLNKGC 475
             +G+  +A  +    +++G    P PV  E + L + L R           QE L +GC
Sbjct: 649 HNQGRTQDADQLYATALERGVVLNPKPVIQEPDELPEGLVRS----------QEELVRGC 698



 Score = 39.3 bits (90), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 85/223 (38%), Gaps = 18/223 (8%)

Query: 467 MQECLNKGCAVNVVNFTSLIRG---FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           M + LN    V V+N  +  +    F Q  D +E             D +T  Y T+ID 
Sbjct: 177 MAQDLNPDAVVKVLNLQTDAQNALRFFQWADKQEGY-----------DHNTDAYFTMIDI 225

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----LSKQ 579
           L +     E   L+ KM ++G   T     + +  Y + GR ++ L+    M        
Sbjct: 226 LGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPG 285

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
              TAYN V+ +L     L+ A  +  +++      +  T   +++ +  K     A K+
Sbjct: 286 LIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKL 345

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              M   N  PD+     V   L      E+A  ++ +  E G
Sbjct: 346 LDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENG 388


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 151/499 (30%), Positives = 264/499 (52%), Gaps = 12/499 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y ++LEIL      + A  V   M  R I      F  +M A     ++ +A+ VL  M 
Sbjct: 179 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMT 238

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           K    PN +I  T IH L   N++ +AL+ LE M L G  P+  T+N +I G C   RI 
Sbjct: 239 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 298

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL--------FH 315
           +A K+++ M ++G +PD ++Y  +M  LCK  R+   +DL  ++   +++        F 
Sbjct: 299 EAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFV 358

Query: 316 DQGRIEEAKELVNQM-SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             GR+++AK +++ M +  G +PDV TY +++ G+ + G +  A ++L+ M + GCKPN 
Sbjct: 359 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNV 418

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            SYT  ++G C  GK  EA  ++N    +   PN + ++ ++    +E ++ EA ++ RE
Sbjct: 419 YSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 478

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M +KG  P     N LI  LC   ++  A   +++ +++G   N V + +LI  F ++G+
Sbjct: 479 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 538

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           ++EA  L+++M       D +TY ++I  L + G V++A  L  KML  GLVP+ ++   
Sbjct: 539 IKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNI 598

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I+  C+ G VE+ ++  ++M+ +        +N +I  LC  G +E+   +  K+    
Sbjct: 599 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 658

Query: 613 SKADASTCHVLVESYLNKG 631
              D  T + L+ S+L KG
Sbjct: 659 IPPDTVTYNTLM-SWLCKG 676



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 162/607 (26%), Positives = 288/607 (47%), Gaps = 21/607 (3%)

Query: 98  ELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
            LRN    + P Q+C +L    D   +++ F W   Q  YRH   VY +++  L      
Sbjct: 62  SLRNSFHKITPFQLCKLLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEF 121

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG-KLRNAMYVLSMMQKAAVAPNLLICNT 216
           +   R+L  M   GI  +   F  +M  Y +AG   +    +L M    +  P     N 
Sbjct: 122 KTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNV 181

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            + +LV GN    A      M    I P + T+  ++K  C ++ +  A+ ++ +M   G
Sbjct: 182 VLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHG 241

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHDQ-------GRIEEAK 324
           C P+ V Y T++  L K  R+ E   L+E+M     V D+  F+D         RI EA 
Sbjct: 242 CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA 301

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           ++VN+M   G  PD +TY  ++NG C++G +D AK     +++   KP +V +   ++G 
Sbjct: 302 KMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAK----DLFYRIPKPTSVIFNTLIHGF 357

Query: 385 CHNGKSLEAREMINTSEEEWW-TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
             +G+  +A+ +++     +   P+  TY+ +++G  ++G +  A +V+R+M  KG  P 
Sbjct: 358 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPN 417

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
                +L+   C+ GK+D A   + E    G   N V F  LI  FC++  + EA+ +  
Sbjct: 418 VYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 477

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M      PD  T+ ++I  L +   ++ A  L+  M+S+G+V   VTY T+I+ + + G
Sbjct: 478 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 537

Query: 564 RVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
            +++  KL+ +M+ +        YN +I+ LC  G +++A  +  K+LR      + +C+
Sbjct: 538 EIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCN 597

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
           +L+      G+   A +    M  R   PD+     +   L   G+ E+  T M R ++ 
Sbjct: 598 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT-MFRKLQA 656

Query: 682 GHIQPKS 688
             I P +
Sbjct: 657 EGIPPDT 663



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 177/350 (50%), Gaps = 13/350 (3%)

Query: 160 AKRVLR-LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
           AK VL  ++   GI      ++ L+  Y + G +  A+ VL  M+     PN+      +
Sbjct: 366 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILV 425

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
                  K+ +A   L  M   G+ PN + +NCLI  +C  HRI +A+++  EMP KGC 
Sbjct: 426 DGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 485

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKEL 326
           PD  ++ +++  LC+   IK    L+  M+++             N F  +G I+EA++L
Sbjct: 486 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 545

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           VN+M   G + D +TY +++ G CR GE+D+A+ + ++M   G  P+++S    +NGLC 
Sbjct: 546 VNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCR 605

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
           +G   EA E          TP+ +T++ +++GL R G++ +   + R++  +G  P  V 
Sbjct: 606 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 665

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            N L+  LC+ G +  A   + E +  G   N   ++ L++    +  L+
Sbjct: 666 YNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLD 715



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 96/190 (50%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y  ++    +    + A++++  M  +G       ++ L+    RAG++  A  + 
Sbjct: 522 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLF 581

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  + P+ + CN  I+ L     + +A+ F + M L G TP+++T+N LI G C  
Sbjct: 582 EKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 641

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            RI+D + +  ++  +G  PD V+Y T+M +LCK   + +   L+++ + D  + +D+  
Sbjct: 642 GRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTW 701

Query: 320 IEEAKELVNQ 329
               + LV Q
Sbjct: 702 SILLQSLVPQ 711



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 70/158 (44%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  +++ L +      A+ +   M R G+     + + L+    R+G +  A+   
Sbjct: 557 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQ 616

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M      P+++  N+ I+ L    ++   L    ++Q  GI P+ +TYN L+   C  
Sbjct: 617 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKG 676

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
             + DA  L+DE    G  P+  ++  ++  L  ++ +
Sbjct: 677 GFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETL 714


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 169/623 (27%), Positives = 296/623 (47%), Gaps = 53/623 (8%)

Query: 115 LRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIEC 174
           LRSQ D+  AL+ F  A ++  +  +P +Y  +L  L ++      K++L  M     E 
Sbjct: 57  LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116

Query: 175 RPEAFSYLMVAYSRAGKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
               F  L+ +Y++       + V+  M+ +  + P+    N  +++LV GN L      
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYL- 291
             +M + GI P+V T+N LIK  C  H+++ AI ++++MP  G  PD+ ++ TVM GY+ 
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236

Query: 292 ---------------------------------CKEKRIKEVRDLMEKMVNDSNLFHDQ- 317
                                            CKE R+++  + +++M N    F DQ 
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296

Query: 318 ------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                       G ++ A E+++ M Q G  PDV TY +V++G C++GE+ +A ++L QM
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
               C PNTV+Y   ++ LC   +  EA E+      +   P+  T++ ++ GL      
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             A ++  EM  KG  P     N+LI SLC +GK+D A   +++    GCA +V+ + +L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I GFC+     EA  + D+M +     ++VTY T+ID L K+ RVE+A +LM +M+ +G 
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGK 603
            P   TY +++  +C+ G ++    +++ M S   +     Y  +I  LC  G +E A K
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           +L  +            + +++    K     A  +   M  +N  P   +  ++  R +
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656

Query: 664 LEGKS--EEADTLMLRFVERGHI 684
             G     EA   ++  +E+G +
Sbjct: 657 CNGGGPIREAVDFLVELLEKGFV 679



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 234/490 (47%), Gaps = 29/490 (5%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY-- 181
           AL F      Q  +  D   +  ++  L K    + A  ++ +M + G +  P+ ++Y  
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD--PDVYTYNS 335

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           ++    + G+++ A+ VL  M     +PN +  NT I  L   N++ +A      +   G
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I P+V T+N LI+G C     + A++L +EM  KGC PD+ +Y  ++  LC         
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS-------- 447

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                          +G+++EA  ++ QM   GC   V+TY  +++GFC+  +  +A+++
Sbjct: 448 ---------------KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             +M  HG   N+V+Y   ++GLC + +  +A ++++    E   P+  TY+ ++    R
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR 552

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            G + +A D+V+ M   G  P  V    LI  LC+ G+++ A K ++    KG  +    
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMY-LCKKDPDTVTYTTIIDAL-SKNGRVEEATELMMK 539
           +  +I+G  +K    EA++L  +M    +  PD V+Y  +   L +  G + EA + +++
Sbjct: 613 YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVE 672

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLE 599
           +L KG VP   +   +      +   E L+KL+  ++ K +       +++ L      +
Sbjct: 673 LLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQ 732

Query: 600 EAGKILGKVL 609
           +A   LG VL
Sbjct: 733 DALATLGGVL 742


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 151/512 (29%), Positives = 262/512 (51%), Gaps = 38/512 (7%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G+L      L  M      P+++ C T I       K  KA + LE ++ +G  P+V+
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN +I GYC    I +A+ ++D M +   SPD V+Y T++  LC               
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLC--------------- 215

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                   D G++++A E++++M Q  C PDV+TYT ++   CR   +  A K+L +M  
Sbjct: 216 --------DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+ V+Y   +NG+C  G+  EA + +N        PN IT+++++  +   G+  +
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++ +M++KGF P+ V  N+LI  LCR+G +  A   +++    GC  N +++  L+ 
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC++  ++ A+  L+ M      PD VTY T++ AL K+G+VE+A E++ ++ SKG  P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            ++TY TVI    + G+    +KLL++M +K  +     Y+ ++  L   G ++EA K  
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507

Query: 606 GKVLRTASKADASTCHVLV-----ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
            +  R   + +A T + ++         ++ I  L +     M NR   P+      + E
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF-----MINRGCKPNETSYTILIE 562

Query: 661 RLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
            L  EG ++EA  L+     +G ++  S E +
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 243/453 (53%), Gaps = 32/453 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A ++L ++   G    P+  +Y  ++  Y +AG++ NA+ VL  M   +V+P+++  NT 
Sbjct: 156 AAKILEILEGSG--AVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTI 210

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +  L    KL +A+  L+RM      P+V+TY  LI+  C    +  A+KL+DEM  +GC
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC 270

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
           +PD V+Y  ++  +CKE                       GR++EA + +N M   GC P
Sbjct: 271 TPDVVTYNVLVNGICKE-----------------------GRLDEAIKFLNDMPSSGCQP 307

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           +V+T+  ++   C  G    A+K+L  M   G  P+ V++   +N LC  G    A +++
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
               +    PN+++Y+ ++HG  +E K+  A + +  MV +G +P  V  N ++ +LC++
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           GK++ A + + +  +KGC+  ++ + ++I G  + G   +A+ LLD+M      PDT+TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           ++++  LS+ G+V+EA +   +    G+ P  VT+ +++   C+  + +  +  L  M++
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547

Query: 578 K--QKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
           +  +   T+Y  +IE L   G  +EA ++L ++
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 215/421 (51%), Gaps = 19/421 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D I Y +M+    K      A  VL  M+       P+  +Y  ++ +   +GKL+ AM 
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS-----VSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL  M +    P+++     I      + +  A++ L+ M+  G TP+V+TYN L+ G C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              R+ +AIK +++MP  GC P+ +++  ++  +C   R  +   L+  M+         
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 N    +G +  A +++ +M Q GC P+ ++Y  +++GFC+  ++D+A + L++M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              GC P+ V+Y   L  LC +GK  +A E++N    +  +P  ITY+ V+ GL + GK 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A  ++ EM  K   P  +  + L+  L REGK+D A KF  E    G   N V F S+
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           + G C+    + A+  L  M      P+  +YT +I+ L+  G  +EA EL+ ++ +KGL
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585

Query: 546 V 546
           +
Sbjct: 586 M 586



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 42/255 (16%)

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF------ 489
           V   F    VE N  ++ + R G+++   KF++  +  G   +++  T+LIRGF      
Sbjct: 94  VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153

Query: 490 -----------------------------CQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
                                        C+ G++  ALS+LD M +    PD VTY TI
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTI 210

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           + +L  +G++++A E++ +ML +   P V+TY  +I   C+   V   +KLL++M  +  
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR-G 269

Query: 581 CR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
           C      YN ++  +C  G L+EA K L  +  +  + +  T ++++ S  + G  + A 
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329

Query: 638 KVACRMFNRNLIPDL 652
           K+   M  +   P +
Sbjct: 330 KLLADMLRKGFSPSV 344



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 1/201 (0%)

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           +N   A+  V   + +R   + G+LEE    L++M      PD +  TT+I    + G+ 
Sbjct: 94  VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIE 590
            +A +++  +   G VP V+TY  +I  YC+ G + + L +L++M       T YN ++ 
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVT-YNTILR 212

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
           +LC  G L++A ++L ++L+     D  T  +L+E+         A K+   M +R   P
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272

Query: 651 DLKLCKKVSERLILEGKSEEA 671
           D+     +   +  EG+ +EA
Sbjct: 273 DVVTYNVLVNGICKEGRLDEA 293


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 148/524 (28%), Positives = 264/524 (50%), Gaps = 19/524 (3%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  M+    +    + A+R++      G+   P+ F++  L+ A    G++ +A+ V 
Sbjct: 131 VTYNTMVNGYCRAGRIEDARRLIS-----GMPFPPDTFTFNPLIRALCVRGRVPDALAVF 185

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M     +P+++  +  +      +   +A+  L+ M+  G  P+++TYN LI   C+ 
Sbjct: 186 DDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNE 245

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
             + +A+ ++ ++P  GC PD V+Y  V+  LC  +R KEV +L  +M +     D   F
Sbjct: 246 GDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTF 305

Query: 315 H-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +        QG ++ A ++V+ MS+ GCIPD+VTY+++++G C VG +D A ++L ++  
Sbjct: 306 NTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKS 365

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +GCKP+T++YT  L GLC   +   A E++         P+ +T++ V+  L ++G +  
Sbjct: 366 YGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDR 425

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  VV +M + G  P  V  N +I  LC E  +D A + +    + GC  ++V F +L++
Sbjct: 426 AIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLK 485

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C     E+A  L+ +M      PD  T+ T+I +L + G + +A E +  M   G +P
Sbjct: 486 GLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIP 545

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGK 607
              TY  V+    + G+ ++ LKLL  M +       YN VI N+   G +EEA  +L  
Sbjct: 546 NQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRV 605

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           ++      D  T   L      +     A ++ CR+ +  L PD
Sbjct: 606 MVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPD 649



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 236/477 (49%), Gaps = 22/477 (4%)

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           CN  I  L  G ++A A R    +   G +  V+TYN ++ GYC   RI+DA +LI  MP
Sbjct: 101 CNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLISGMP 157

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHDQGRIE--- 321
                PD  ++  ++  LC   R+ +   + + M         V  S L     +     
Sbjct: 158 FP---PDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYR 214

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +A  L+++M   GC PD+VTY  ++N  C  G++D+A  +L  +  HGCKP+ V+YT  L
Sbjct: 215 QAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVL 274

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
             LC + +  E  E+          P+ +T++ ++  L ++G +  A  VV  M + G  
Sbjct: 275 KSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCI 334

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  + ++  LC  G++D A + +    + GC  + + +T++++G C     E A  L
Sbjct: 335 PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEEL 394

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           + +M      PD VT+ T+I +L + G V+ A +++ +M   G  P +VTY ++I   C 
Sbjct: 395 MAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCN 454

Query: 562 VGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
              ++D ++LL   L    C+     +N +++ LCS    E+A +++  ++ +    DA+
Sbjct: 455 ERCIDDAMELLSN-LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDAT 513

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           T + ++ S   KG+ L A +    M     IP+      V + L+  GK++EA  L+
Sbjct: 514 TFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLL 570



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 240/495 (48%), Gaps = 38/495 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG--KLRNAMY 197
           D + Y +++  +        A  +L  +   G  C+P+A +Y  V  S  G  + +    
Sbjct: 231 DIVTYNVLINAMCNEGDVDEALNILSDLPSHG--CKPDAVTYTPVLKSLCGSERWKEVEE 288

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           + + M     AP+ +  NT +  L     + +A++ ++ M   G  P+++TY+ ++ G C
Sbjct: 289 LFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLC 348

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----NDSN 312
           D+ R+ DA++L+  +   GC PD ++Y TV+  LC  ++ +   +LM +MV      D  
Sbjct: 349 DVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEV 408

Query: 313 LFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            F+        +G ++ A ++V QMS+ GC PD+VTY ++++G C    +D A ++L  +
Sbjct: 409 TFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNL 468

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
             +GCKP+ V++   L GLC   +  +A +++         P+A T++ V+  L ++G L
Sbjct: 469 QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLL 528

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A + ++ M + G  P     N+++ +L + GK   A K +    N     +++ + ++
Sbjct: 529 LQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTV 586

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I    + G +EEAL LL  M      PDT+TY ++   + +    + A  ++ ++   GL
Sbjct: 587 ISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGL 646

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT------------AY-------N 586
            P    Y  ++  +CQ  R +  +     M+S   C              AY        
Sbjct: 647 SPDATFYNDILLGFCQNWRTDIAIDCFAHMVSS-GCMPDESTYIILLEALAYECLLDEAK 705

Query: 587 QVIENLCSFGYLEEA 601
           Q++ NLCS G L+++
Sbjct: 706 QLLVNLCSLGVLDKS 720


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 151/541 (27%), Positives = 260/541 (48%), Gaps = 13/541 (2%)

Query: 115 LRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIEC 174
           L++  +    L FF        ++H    Y +M+E L +       + +L+ M   GI C
Sbjct: 48  LKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINC 107

Query: 175 RPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
             + F  ++  Y R G    A+ +   + +    P + I N  +  L+  NK        
Sbjct: 108 CEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLY 167

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
             M+  G+ PNV TYN L+K  C   R+  A KL  EM  KGC PD V+Y T++  LCK 
Sbjct: 168 TNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKA 227

Query: 295 KRIKEVRDLMEKMVNDSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
            +I + R+L  +      +++        +GRIE A +L+ +M   G  P+VV+Y+ ++N
Sbjct: 228 GKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
             C  G ++ A  +  QM+  GC  N  ++T  + G    GK  EA ++     ++   P
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP 347

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           N + Y+ ++HGL   G L EA  V  +M + G  P     ++LI    + G + GA +  
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
              ++ GC  NVV +T ++   C+    ++A SL++ M L    P+T+T+ T I  L  N
Sbjct: 408 NRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGN 467

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAY 585
           GRVE A +L+ +M   G +P + TY  ++    ++ + E+   L +++ ++  Q     Y
Sbjct: 468 GRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTY 527

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           N V+      G + EA ++ GK L   +  D+ T + ++ +Y  +G      K+A ++  
Sbjct: 528 NTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQG----KVKIAAQLVE 583

Query: 646 R 646
           R
Sbjct: 584 R 584



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 162/375 (43%), Gaps = 59/375 (15%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  RG +     F+ L+      GKL  A+ +  +M +    PN++  NT IH L     
Sbjct: 305 MFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGS 364

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L +AL+  ++MQ +G  PNV TY+ LI G+     +  A +  + M   GC P+ V+Y  
Sbjct: 365 LEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTC 424

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LCK                  N   DQ     A  LV +M+  GC P+ +T+   +
Sbjct: 425 MVDVLCK------------------NSMFDQ-----ANSLVEKMTLEGCTPNTITFNTFI 461

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
            G C  G ++ A K+L++M  HGC PN  +Y   L+ L    K  EA  +    E     
Sbjct: 462 KGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQ 521

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK------- 459
           PN +TY+ V++G  R G + EA  +  + + +G  P  +  N +I + C++GK       
Sbjct: 522 PNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL 581

Query: 460 -----------------------------MDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
                                        ++ A  F+ + +N+G   N   + +L+R F 
Sbjct: 582 VERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 641

Query: 491 QKGDLEEALSLLDDM 505
                   + +LDD+
Sbjct: 642 DSLGHMGPIHILDDI 656



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 175/357 (49%), Gaps = 11/357 (3%)

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +M  + C  D+  +  ++NG+ RVG  +QA KM  ++   GCKP    Y   L+ L    
Sbjct: 101 KMDGINCCEDL--FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSEN 158

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K      +    +++   PN  TY++++  L +  ++  A  +  EM  KG  P  V   
Sbjct: 159 KFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYT 218

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            ++ SLC+ GK+D A++     L      +V  + +LI G C++G +E A+ LL +M   
Sbjct: 219 TMVSSLCKAGKIDDARE-----LAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDN 273

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
             DP+ V+Y+ II++L  +G VE A  L  +M  +G    + T+  +I      G++ + 
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333

Query: 569 LKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           L L  K++ +  C     AYN +I  LCS G LEEA ++  ++ R+    + +T  +L++
Sbjct: 334 LDLW-KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILID 392

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +   G  + A +   RM +    P++     + + L      ++A++L+ +    G
Sbjct: 393 GFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 115/255 (45%), Gaps = 26/255 (10%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + + Y  M+++L K  +   A  ++  M   G       F+  +      G++  AM 
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMK 475

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  MQ     PN+   N  +  L   NK  +A    + ++   + PN++TYN ++ G+ 
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               + +A++L  +  ++G +PD ++Y T++   CK+ ++K    L+E            
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVE------------ 583

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            R+   KE           PD++TYT+++ G C    +++A   L +  + G  PN  ++
Sbjct: 584 -RVSSMKEWH---------PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATW 633

Query: 378 TA----FLNGLCHNG 388
            A    F + L H G
Sbjct: 634 NALVRCFFDSLGHMG 648


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 162/586 (27%), Positives = 290/586 (49%), Gaps = 54/586 (9%)

Query: 74  RHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADR 133
           RHP      +L  L S ++P+    L              +L+SQ D  + L+F  WA  
Sbjct: 33  RHPE-----QLTLLSSHFTPQASSNL--------------LLKSQFDSSLVLKFLDWARS 73

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKR----------------VLRLMARRGIECRPE 177
           Q  +        + L IL++ KL + A+                 + + +     +C+  
Sbjct: 74  QQFFSFQ--CKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSS 131

Query: 178 AFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK-ALRFL 234
           +  + +V  S  R   +  A+ ++++ +     P +L  N  +  ++   +  K A    
Sbjct: 132 SAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIF 191

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
           + M  +G++PNV TYN LI+G+C    ++  +    EM   GC P+ V+Y T++   CK 
Sbjct: 192 KEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKL 251

Query: 295 KRIKEVRDLMEKM----VNDSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTY 342
           ++I E   L+  M    +N + + ++        +G+++E  E++ +MS+   +PD VT+
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             ++NG+C VG   QA  +  +M  +G  PN V+YT  +N +C  G    A E ++   +
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               PN  TY+ ++ G  ++G L +A  +++EMV+ GF PT +  N LI   C  G+M+ 
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A   +QE + +G   +VV+++++I GFC+  +LE+A  L  +M      PD  TY+++I 
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQ 491

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
            L K  R+ E  +L  +MLS GL P  VTY ++I+ YC  G ++  L+L ++M+ K    
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP 551

Query: 583 --TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
               YN +I         +EA ++L K+L   S  +  T + L+++
Sbjct: 552 DIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN 597



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 220/450 (48%), Gaps = 38/450 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++   K +    A ++LRLMA +G+     +++ ++    R G+++    +L  
Sbjct: 239 VTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEE 298

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M K    P+ +  NT I+         +AL     M   G++PNV+TY  LI   C    
Sbjct: 299 MSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGN 358

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +  A++ +D+M  +G  P+  +Y T++                       + F  QG ++
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLI-----------------------DGFSQQGFLK 395

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +A +++ +M + G  P ++TY A++NG C +G ++ A  +LQ+M   G  P+ VSY+  +
Sbjct: 396 QAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTII 455

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G C N +  +A ++      +  +P+  TYS ++ GL ++ +L E CD+ +EM+  G  
Sbjct: 456 SGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLP 515

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V    LI + C EG +D A +   E + KG + ++V +  LI GF ++   +EA  L
Sbjct: 516 PDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRL 575

Query: 502 LDDMYLCKKDPDTVTYTTIID-----------ALSKN----GRVEEATELMMKMLSKGLV 546
           L  +   +  P+ +TY T+ID           AL K     G + EA  ++  ML KG  
Sbjct: 576 LLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYK 635

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
                Y  +IH + +VG +E    L ++ML
Sbjct: 636 LNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 190/408 (46%), Gaps = 27/408 (6%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M + G+      ++ L+ +  +AG L  AM  L  M+   + PN     T I        
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L +A + ++ M   G TP ++TYN LI G+C L R++DA  L+ EM  +G  PD VSY T
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMG 334
           ++   C+ + +++   L  +MV           S+L      Q R+ E  +L  +M  +G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             PD VTYT+++N +C  G+LD+A ++  +M   G  P+ V+Y   +NG     ++ EA+
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573

Query: 395 EMINTSEEEWWTPNAITYSVV---------------MHGLRREGKLSEACDVVREMVKKG 439
            ++     E   PN ITY+ +               M G   +G ++EA  V+  M++KG
Sbjct: 574 RLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKG 633

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           +       N++I    + G ++ A    +E L+ G A + V   +L +    +G   E  
Sbjct: 634 YKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELN 693

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            LLD      +  +      +I   SK G ++    ++  M   GL+P
Sbjct: 694 QLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 191/399 (47%), Gaps = 29/399 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  + K      A   L  M  RG+      ++ L+  +S+ G L+ A  ++  
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +    P ++  N  I+   +  ++  A   L+ M   G  P+V++Y+ +I G+C    
Sbjct: 404 MVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQE 463

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
           ++ A +L  EM  KG SPD  +Y +++  LCK++R+ EV DL ++M++            
Sbjct: 464 LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTS 523

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             N +  +G +++A  L ++M Q G  PD+VTY  ++NGF +     +AK++L ++ +  
Sbjct: 524 LINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEE 583

Query: 370 CKPNTVSYT---------------AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
             PN ++Y                A + G C  G   EA  ++ +  ++ +  N   Y+V
Sbjct: 584 SVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNV 643

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++HG  + G + +A ++ +EM+  GF P  V I  L +SL  EGK     + +   L K 
Sbjct: 644 IIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTL-KS 702

Query: 475 CAVNVVNFTSLIRGFCQK-GDLEEALSLLDDMYLCKKDP 512
           C +       ++ G   K G+++   ++L DM L    P
Sbjct: 703 CRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 141/296 (47%), Gaps = 3/296 (1%)

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHG-LRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
           +A  ++N ++   + P  ++Y+ ++   +R +  +  A  + +EMV+ G  P     N+L
Sbjct: 150 KALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNIL 209

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I+  C  G ++    F  E    GC  NVV + ++I  +C+   + EA  LL  M L   
Sbjct: 210 IRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGL 269

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
           +P+ ++Y  +I+ L + G+++E +E++ +M  +  VP  VT+ T+I+ YC VG     L 
Sbjct: 270 NPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALV 329

Query: 571 LLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           L  +M+          Y  +I ++C  G L  A + L ++       +  T   L++ + 
Sbjct: 330 LHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFS 389

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
            +G    AY++   M      P +     +     + G+ E+A  L+   +ERG I
Sbjct: 390 QQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFI 445


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 162/586 (27%), Positives = 290/586 (49%), Gaps = 54/586 (9%)

Query: 74  RHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADR 133
           RHP      +L  L S ++P+    L              +L+SQ D  + L+F  WA  
Sbjct: 33  RHPE-----QLTLLSSHFTPQASSNL--------------LLKSQFDSSLVLKFLDWARS 73

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKR----------------VLRLMARRGIECRPE 177
           Q  +        + L IL++ KL + A+                 + + +     +C+  
Sbjct: 74  QQFFSFQ--CKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSS 131

Query: 178 AFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK-ALRFL 234
           +  + +V  S  R   +  A+ ++++ +     P +L  N  +  ++   +  K A    
Sbjct: 132 SAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIF 191

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
           + M  +G++PNV TYN LI+G+C    ++  +    EM   GC P+ V+Y T++   CK 
Sbjct: 192 KEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKL 251

Query: 295 KRIKEVRDLMEKM----VNDSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTY 342
           ++I E   L+  M    +N + + ++        +G+++E  E++ +MS+   +PD VT+
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             ++NG+C VG   QA  +  +M  +G  PN V+YT  +N +C  G    A E ++   +
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               PN  TY+ ++ G  ++G L +A  +++EMV+ GF PT +  N LI   C  G+M+ 
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A   +QE + +G   +VV+++++I GFC+  +LE+A  L  +M      PD  TY+++I 
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQ 491

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
            L K  R+ E  +L  +MLS GL P  VTY ++I+ YC  G ++  L+L ++M+ K    
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP 551

Query: 583 --TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
               YN +I         +EA ++L K+L   S  +  T + L+++
Sbjct: 552 DIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN 597



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 225/465 (48%), Gaps = 38/465 (8%)

Query: 127 FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY 186
           FF+    +     + + Y  +++   K +    A ++LRLMA +G+     +++ ++   
Sbjct: 224 FFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGL 283

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
            R G+++    +L  M K    P+ +  NT I+         +AL     M   G++PNV
Sbjct: 284 CREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNV 343

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           +TY  LI   C    +  A++ +D+M  +G  P+  +Y T++                  
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLI------------------ 385

Query: 307 MVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                + F  QG +++A +++ +M + G  P ++TY A++NG C +G ++ A  +LQ+M 
Sbjct: 386 -----DGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMI 440

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  P+ VSY+  ++G C N +  +A ++      +  +P+  TYS ++ GL ++ +L 
Sbjct: 441 ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLG 500

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           E CD+ +EM+  G  P  V    LI + C EG +D A +   E + KG + ++V +  LI
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID-----------ALSKN----GRVE 531
            GF ++   +EA  LL  +   +  P+ +TY T+ID           AL K     G + 
Sbjct: 561 NGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMN 620

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           EA  ++  ML KG       Y  +IH + +VG +E    L ++ML
Sbjct: 621 EADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 190/408 (46%), Gaps = 27/408 (6%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M + G+      ++ L+ +  +AG L  AM  L  M+   + PN     T I        
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L +A + ++ M   G TP ++TYN LI G+C L R++DA  L+ EM  +G  PD VSY T
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMG 334
           ++   C+ + +++   L  +MV           S+L      Q R+ E  +L  +M  +G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             PD VTYT+++N +C  G+LD+A ++  +M   G  P+ V+Y   +NG     ++ EA+
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573

Query: 395 EMINTSEEEWWTPNAITYSVV---------------MHGLRREGKLSEACDVVREMVKKG 439
            ++     E   PN ITY+ +               M G   +G ++EA  V+  M++KG
Sbjct: 574 RLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKG 633

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           +       N++I    + G ++ A    +E L+ G A + V   +L +    +G   E  
Sbjct: 634 YKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELN 693

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            LLD      +  +      +I   SK G ++    ++  M   GL+P
Sbjct: 694 QLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 191/399 (47%), Gaps = 29/399 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  + K      A   L  M  RG+      ++ L+  +S+ G L+ A  ++  
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +    P ++  N  I+   +  ++  A   L+ M   G  P+V++Y+ +I G+C    
Sbjct: 404 MVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQE 463

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
           ++ A +L  EM  KG SPD  +Y +++  LCK++R+ EV DL ++M++            
Sbjct: 464 LEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTS 523

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             N +  +G +++A  L ++M Q G  PD+VTY  ++NGF +     +AK++L ++ +  
Sbjct: 524 LINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEE 583

Query: 370 CKPNTVSYT---------------AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
             PN ++Y                A + G C  G   EA  ++ +  ++ +  N   Y+V
Sbjct: 584 SVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNV 643

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++HG  + G + +A ++ +EM+  GF P  V I  L +SL  EGK     + +   L K 
Sbjct: 644 IIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTL-KS 702

Query: 475 CAVNVVNFTSLIRGFCQK-GDLEEALSLLDDMYLCKKDP 512
           C +       ++ G   K G+++   ++L DM L    P
Sbjct: 703 CRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 141/296 (47%), Gaps = 3/296 (1%)

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHG-LRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
           +A  ++N ++   + P  ++Y+ ++   +R +  +  A  + +EMV+ G  P     N+L
Sbjct: 150 KALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNIL 209

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I+  C  G ++    F  E    GC  NVV + ++I  +C+   + EA  LL  M L   
Sbjct: 210 IRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGL 269

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
           +P+ ++Y  +I+ L + G+++E +E++ +M  +  VP  VT+ T+I+ YC VG     L 
Sbjct: 270 NPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALV 329

Query: 571 LLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           L  +M+          Y  +I ++C  G L  A + L ++       +  T   L++ + 
Sbjct: 330 LHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFS 389

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
            +G    AY++   M      P +     +     + G+ E+A  L+   +ERG I
Sbjct: 390 QQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFI 445


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 156/522 (29%), Positives = 260/522 (49%), Gaps = 39/522 (7%)

Query: 175 RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL- 231
           +P   +Y  L+  +SRAG  +  + + + M     +P+++  NT +        L +AL 
Sbjct: 21  KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
            F  +M     +P   TY  LI G C   RI +A +L+DEM  K C PD   Y  ++  L
Sbjct: 81  HFRGKMW---CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGL 137

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           CK                        G+I+ A+ ++  M +  C+PDV+TYT+++ G C+
Sbjct: 138 CK-----------------------MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQ 174

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
              LD+A+K++++M   G  P+TV+Y A LNGLC   +  E  +++    E    P+  +
Sbjct: 175 TNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFS 234

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+ V+  L   GK  EA  ++ +M++K   P  V  N L+   C+  KMD A++ +++ +
Sbjct: 235 YNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMV 294

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            + CA  V+ +T+LI GF +   L +A  +++DM+     PD VTY  ++D L K G++E
Sbjct: 295 GRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLE 354

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVI 589
           EA EL+  M+ K   P VVTY  +++  C++G+V+D   LLE ML +  Q     +N +I
Sbjct: 355 EAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMI 414

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           +  C  G ++E  K+L  +   +   D  T   L++ Y        A+ +        + 
Sbjct: 415 DGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GIS 468

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
           PD      + E L   GK EEA  +M    ++G   P +  H
Sbjct: 469 PDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGC--PPTSSH 508



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/572 (27%), Positives = 288/572 (50%), Gaps = 27/572 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
             Y +++  L + +    A ++L  M ++  +C P+A  Y  L+    + GK+  A  VL
Sbjct: 93  FTYCILIHGLCQCQRIDEAYQLLDEMIQK--DCHPDAAVYNCLIAGLCKMGKIDAARNVL 150

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            MM + +  P+++   + I      N L +A + +E+M+ +G+TP+ + YN L+ G C  
Sbjct: 151 KMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQ 210

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
           +++++  KL++EM   G  PD  SY TV+  LC+  + +E   ++EKM+           
Sbjct: 211 NQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTY 270

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               + F    +++EA+ L+  M    C P V+TYT ++ GF R   L  A ++++ M+ 
Sbjct: 271 NSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFK 330

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+ V+Y   L+GLC  GK  EA E++    E+   P+ +TYS++++GL + GK+ +
Sbjct: 331 AGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDD 390

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++  M+++G  P  V  N +I   C+ GK+D   K ++      C  +VV +++LI 
Sbjct: 391 ARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLID 450

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G+C+   +++A ++L         PD  +Y+++++ L   G+VEEA E+M  M  +G  P
Sbjct: 451 GYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPP 504

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKI 604
           T   Y  +I   C V R ++ LK+L+ M S++ C      Y+ +I  LC    +E+A  +
Sbjct: 505 TSSHYALIIGGLCDVERGDEALKMLQVM-SERGCEPNLYTYSILINGLCKTKRVEDAINV 563

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
           L  +L      D +T   L++ +        AY+    M +    PD      +      
Sbjct: 564 LDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQ 623

Query: 665 EGKSEEADTLMLRFVERGHIQPKSEEHLQRQR 696
            G  E+A  +M   +E+G   P +  +    R
Sbjct: 624 SGNVEKAIEVMQLMLEKG-CNPDAATYFSLMR 654



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 256/501 (51%), Gaps = 20/501 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  ++    +T     A++++  M   G+     A++ L+    +  +L     +L
Sbjct: 161 DVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLL 220

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +A   P+    NT +  L    K  +A + LE+M      P+V+TYN L+ G+C +
Sbjct: 221 EEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKV 280

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            ++ +A +L+++M  + C+P  ++Y T++G   +  R+ +   +ME M            
Sbjct: 281 SKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTY 340

Query: 312 NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N   D     G++EEA EL+  M +  C PDVVTY+ +VNG C++G++D A+ +L+ M  
Sbjct: 341 NCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLE 400

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC+PN V++   ++G C  GK  E  +++   +E   TP+ +TYS ++ G  +  ++ +
Sbjct: 401 RGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQD 460

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++      G  P     + +++ LC  GK++ A++ M     +GC     ++  +I 
Sbjct: 461 AFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIG 514

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C     +EAL +L  M     +P+  TY+ +I+ L K  RVE+A  ++  ML KG VP
Sbjct: 515 GLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVP 574

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            V TY ++I  +C++ +++   +  + M     +  + AYN +I   C  G +E+A +++
Sbjct: 575 DVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVM 634

Query: 606 GKVLRTASKADASTCHVLVES 626
             +L      DA+T   L+ S
Sbjct: 635 QLMLEKGCNPDAATYFSLMRS 655



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 217/429 (50%), Gaps = 45/429 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  ++  L ++   + A ++L  M  +  +C P+  +Y  LM  + +  K+  A  
Sbjct: 231 DTFSYNTVVACLCESGKYEEAGKILEKMIEK--KCGPDVVTYNSLMDGFCKVSKMDEAER 288

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M     AP ++   T I      ++LA A R +E M  AGI+P+++TYNCL+ G C
Sbjct: 289 LLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLC 348

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNL- 313
              ++++A +L++ M  K C+PD V+Y  ++  LCK  ++ + R L+E M+      NL 
Sbjct: 349 KAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLV 408

Query: 314 --------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR-------------- 351
                   F   G+++E  +++  M ++ C PDVVTY+ +++G+C+              
Sbjct: 409 TFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGIS 468

Query: 352 ---------------VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
                           G++++A++++  M   GC P +  Y   + GLC   +  EA +M
Sbjct: 469 PDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKM 528

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +    E    PN  TYS++++GL +  ++ +A +V+  M++KG  P       LI   C+
Sbjct: 529 LQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCK 588

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
             KMD A +  +   + GC  + + +  LI GFCQ G++E+A+ ++  M     +PD  T
Sbjct: 589 INKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAAT 648

Query: 517 YTTIIDALS 525
           Y +++ +L+
Sbjct: 649 YFSLMRSLT 657



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 170/332 (51%), Gaps = 22/332 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  +L+ L K    + A  +L +M  +  +C P+  +Y  L+    + GK+ +A  
Sbjct: 336 DLVTYNCLLDGLCKAGKLEEAHELLEVMVEK--DCAPDVVTYSILVNGLCKLGKVDDARL 393

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L MM +    PNL+  NT I       K+ +  + LE M+    TP+V+TY+ LI GYC
Sbjct: 394 LLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYC 453

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI---KEVRDLMEKMVNDSNLF 314
             +R++DA  ++      G SPDK SY +++  LC   ++   +EV DLM K        
Sbjct: 454 KANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSS 507

Query: 315 H---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
           H         D  R +EA +++  MS+ GC P++ TY+ ++NG C+   ++ A  +L  M
Sbjct: 508 HYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVM 567

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              GC P+  +YT+ ++G C   K   A +   T  +    P+ + Y++++ G  + G +
Sbjct: 568 LEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNV 627

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
            +A +V++ M++KG  P       L++SL  E
Sbjct: 628 EKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 151/541 (27%), Positives = 260/541 (48%), Gaps = 13/541 (2%)

Query: 115 LRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIEC 174
           L++  +    L FF        ++H    Y +M+E L +       + +L+ M   GI C
Sbjct: 48  LKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINC 107

Query: 175 RPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
             + F  ++  Y R G    A+ +   + +    P + I N  +  L+  NK        
Sbjct: 108 CEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLY 167

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
             M+  G+ PNV TYN L+K  C   R+  A KL  EM  KGC PD V+Y T++  LCK 
Sbjct: 168 TNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKA 227

Query: 295 KRIKEVRDLMEKMVNDSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
            +I + R+L  +      +++        +GRIE A +L+ +M   G  P+VV+Y+ ++N
Sbjct: 228 GKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
             C  G ++ A  +  QM+  GC  N  ++T  + G    GK  EA ++     ++   P
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP 347

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           N + Y+ ++HGL   G L EA  V  +M + G  P     ++LI    + G + GA +  
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
              ++ GC  NVV +T ++   C+    ++A SL++ M L    P+T+T+ T I  L  N
Sbjct: 408 NRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGN 467

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAY 585
           GRVE A +L+ +M   G +P + TY  ++    ++ + E+   L +++ ++  Q     Y
Sbjct: 468 GRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTY 527

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           N V+      G + EA ++ GK L   +  D+ T + ++ +Y  +G      K+A ++  
Sbjct: 528 NTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQG----KVKIAAQLVE 583

Query: 646 R 646
           R
Sbjct: 584 R 584



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 167/352 (47%), Gaps = 13/352 (3%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  RG +     F+ L+      GKL  A+ +  +M +    PN++  NT IH L     
Sbjct: 305 MFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGS 364

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L +AL+  ++MQ +G  PNV TY+ LI G+     +  A +  + M   GC P+ V+Y  
Sbjct: 365 LEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTC 424

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDS--------NLFH----DQGRIEEAKELVNQMSQMG 334
           ++  LCK     +   L+EKM  +         N F       GR+E A +L+ +M   G
Sbjct: 425 MVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHG 484

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C+P++ TY  +++   R+ + ++A  + Q++     +PN V+Y   L G    G   EA 
Sbjct: 485 CLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEAL 544

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV-REMVKKGFFPTPVEINLLIQS 453
           ++   +      P++ITY+ ++H   ++GK+  A  +V R    K + P  +    LI  
Sbjct: 545 QLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWG 604

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
            C    ++ A  F+ + +N+G   N   + +L+R F         + +LDD+
Sbjct: 605 ACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDI 656



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 175/357 (49%), Gaps = 11/357 (3%)

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +M  + C  D+  +  ++NG+ RVG  +QA KM  ++   GCKP    Y   L+ L    
Sbjct: 101 KMDGINCCEDL--FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSEN 158

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K      +    +++   PN  TY++++  L +  ++  A  +  EM  KG  P  V   
Sbjct: 159 KFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYT 218

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            ++ SLC+ GK+D A++     L      +V  + +LI G C++G +E A+ LL +M   
Sbjct: 219 TMVSSLCKAGKIDDARE-----LAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDN 273

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
             DP+ V+Y+ II++L  +G VE A  L  +M  +G    + T+  +I      G++ + 
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333

Query: 569 LKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           L L  K++ +  C     AYN +I  LCS G LEEA ++  ++ R+    + +T  +L++
Sbjct: 334 LDLW-KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILID 392

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +   G  + A +   RM +    P++     + + L      ++A++L+ +    G
Sbjct: 393 GFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 115/255 (45%), Gaps = 26/255 (10%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + + Y  M+++L K  +   A  ++  M   G       F+  +      G++  AM 
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMK 475

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  MQ     PN+   N  +  L   NK  +A    + ++   + PN++TYN ++ G+ 
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               + +A++L  +  ++G +PD ++Y T++   CK+ ++K    L+E            
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVE------------ 583

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            R+   KE           PD++TYT+++ G C    +++A   L +  + G  PN  ++
Sbjct: 584 -RVSSMKEWH---------PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATW 633

Query: 378 TA----FLNGLCHNG 388
            A    F + L H G
Sbjct: 634 NALVRCFFDSLGHMG 648


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 150/499 (30%), Positives = 262/499 (52%), Gaps = 12/499 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y ++LEIL      + A  V   M  R I      F  +M A+    ++ +A+ +L  M 
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           K    PN +I  T IH L   N++ +AL+ LE M L G  P+  T+N +I G C   RI 
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK-----MVNDSNLFHD-- 316
           +A K+++ M ++G +PD ++Y  +M  LCK  R+   +DL  +     +V  + L H   
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364

Query: 317 -QGRIEEAKELVNQM-SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             GR+++AK +++ M +  G +PDV TY +++ G+ + G +  A ++L  M + GCKPN 
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            SYT  ++G C  GK  EA  ++N    +   PN + ++ ++    +E ++ EA ++ RE
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M +KG  P     N LI  LC   ++  A   +++ +++G   N V + +LI  F ++G+
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           ++EA  L+++M       D +TY ++I  L + G V++A  L  KML  G  P+ ++   
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I+  C+ G VE+ ++  ++M+ +        +N +I  LC  G +E+   +  K+    
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664

Query: 613 SKADASTCHVLVESYLNKG 631
              D  T + L+ S+L KG
Sbjct: 665 IPPDTVTFNTLM-SWLCKG 682



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 162/607 (26%), Positives = 285/607 (46%), Gaps = 21/607 (3%)

Query: 98  ELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
            LRN    + P Q+  +L    +   +++ F W   Q  YRH   VY +++  L      
Sbjct: 68  SLRNSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEF 127

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG-KLRNAMYVLSMMQKAAVAPNLLICNT 216
           +   R+L  M   GI  +   F  +M  Y +AG   +    +L M    +  P     N 
Sbjct: 128 KTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNV 187

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            + +LV GN    A      M    I P + T+  ++K +C ++ I  A+ L+ +M   G
Sbjct: 188 VLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG 247

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHDQ-------GRIEEAK 324
           C P+ V Y T++  L K  R+ E   L+E+M     V D+  F+D         RI EA 
Sbjct: 248 CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA 307

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           ++VN+M   G  PD +TY  ++NG C++G +D AK     +++   KP  V +   ++G 
Sbjct: 308 KMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK----DLFYRIPKPEIVIFNTLIHGF 363

Query: 385 CHNGKSLEAREMINTSEEEWW-TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
             +G+  +A+ +++     +   P+  TY+ +++G  +EG +  A +V+ +M  KG  P 
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
                +L+   C+ GK+D A   + E    G   N V F  LI  FC++  + EA+ +  
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M      PD  T+ ++I  L +   ++ A  L+  M+S+G+V   VTY T+I+ + + G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543

Query: 564 RVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
            +++  KL+ +M+ +        YN +I+ LC  G +++A  +  K+LR        +C+
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
           +L+      G+   A +    M  R   PD+     +   L   G+ E+  T M R ++ 
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT-MFRKLQA 662

Query: 682 GHIQPKS 688
             I P +
Sbjct: 663 EGIPPDT 669



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 175/350 (50%), Gaps = 13/350 (3%)

Query: 160 AKRVLR-LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
           AK VL  ++   GI      ++ L+  Y + G +  A+ VL  M+     PN+      +
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
                  K+ +A   L  M   G+ PN + +NCLI  +C  HRI +A+++  EMP KGC 
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKEL 326
           PD  ++ +++  LC+   IK    L+  M+++             N F  +G I+EA++L
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           VN+M   G   D +TY +++ G CR GE+D+A+ + ++M   G  P+ +S    +NGLC 
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
           +G   EA E          TP+ +T++ +++GL R G++ +   + R++  +G  P  V 
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            N L+  LC+ G +  A   + E +  G   N   ++ L++    +  L+
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 88/172 (51%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y  ++    +    + A++++  M  +G       ++ L+    RAG++  A  + 
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +   AP+ + CN  I+ L     + +A+ F + M L G TP+++T+N LI G C  
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
            RI+D + +  ++  +G  PD V++ T+M +LCK   + +   L+++ + D 
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 160/552 (28%), Positives = 268/552 (48%), Gaps = 10/552 (1%)

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV-APNLLICNTA 217
           G +  L+ M  RG+ C  +A    + A++RAG    A+             P + + N  
Sbjct: 69  GVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHL 128

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +  L+  N +   +   + M+ AG+ PNV TYN LI+  C   R+  A K++DEM  KGC
Sbjct: 129 LDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGC 188

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH-------DQGRIEEAKELVNQM 330
            PD+VS+ T++  +CK  R++E R  + + V     ++        + R+ E   +VN+M
Sbjct: 189 HPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEM 248

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            Q G  P+VVTYT +V+ FC+  EL  A  +L +M   GC PN +++TA + G   +GK 
Sbjct: 249 VQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKV 308

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            +A  M +   +E W P+ I+Y+V++ GL   G L  A D    M +    P     + L
Sbjct: 309 HDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTL 368

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           +      G +DGA     E  + GC  NVV +T++I   C+K   ++A SL+D M +   
Sbjct: 369 VDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNC 428

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P+TVT+ T+I  L   GRV  A  +   M   G  P   TY  ++H   + G  +D   
Sbjct: 429 PPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFA 488

Query: 571 LLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           ++ +ML+   +     YN VI  LC     + A  +LG+++    + DA T + ++ +Y 
Sbjct: 489 MVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYC 548

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
            +G   +A  +  +M   N   ++     +   L  +GK   A   +L+ +  G    ++
Sbjct: 549 KEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEA 608

Query: 689 EEHLQRQRVFLN 700
             ++  + +F N
Sbjct: 609 TWNVLVRAIFTN 620



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 200/484 (41%), Gaps = 41/484 (8%)

Query: 51  DSFDKYRVNREEIRRVVLEEDEFRH-PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPR 109
           D  D  R   +E+ R     DE  H  +V  +C+L  +          E R  L    P 
Sbjct: 171 DRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVE---------EARGFLAETVPV 221

Query: 110 QIC--AVLRSQADERVALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLR 165
           Q    AV+ +   E    + F   +   +    P  + Y  +++   K +  + A  +L 
Sbjct: 222 QASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILA 281

Query: 166 LMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
            M   G  C P    F+ L+  +   GK+ +A+ +   M     AP+ +  N  I  L  
Sbjct: 282 RMVSMG--CTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCC 339

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
              L  AL F   M+   + PN  TY+ L+ G+ +   +  A+ + +EM   GC P+ V 
Sbjct: 340 IGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVV 399

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           Y  ++  LCK+    +   L++KM+ D+                       C P+ VT+ 
Sbjct: 400 YTNMIDVLCKKMMFDQAESLIDKMLMDN-----------------------CPPNTVTFN 436

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            ++   C  G + +A  +   M  +GC PN  +Y   L+GL   G   +A  M+      
Sbjct: 437 TLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNN 496

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
            +  + +TY+ V++ L +      A  ++  M+ +G  P     N +I + C+EGK+  A
Sbjct: 497 GFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIA 556

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
              + +     C  NVV +T LI   C +G L  A+  L  M      P+  T+  ++ A
Sbjct: 557 ACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRA 616

Query: 524 LSKN 527
           +  N
Sbjct: 617 IFTN 620



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 111/268 (41%), Gaps = 39/268 (14%)

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL----------- 499
           ++ L   G +DG +  +QE   +G A       + I  F + G  + AL           
Sbjct: 58  VRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGC 117

Query: 500 -------------------------SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
                                     + D+M     DP+  TY  +I AL +N RV+ A 
Sbjct: 118 RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 177

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCS 594
           +++ +M  KG  P  V++ T++   C++GRVE+    L + +  Q    +YN V+  LC 
Sbjct: 178 KMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQ---ASYNAVVHALCG 234

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
              + E   ++ ++++   + +  T   +V+++       +A  +  RM +    P++  
Sbjct: 235 EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLT 294

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERG 682
              + +    +GK  +A ++    V+ G
Sbjct: 295 FTALVKGFFEDGKVHDALSMWHWMVDEG 322


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/496 (30%), Positives = 249/496 (50%), Gaps = 14/496 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y  +L  L++      A  + R M R  +      F     A  R G+ R+A+ +L  M 
Sbjct: 148 YNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGMA 207

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           +    P+ ++  T IH LV    +A+A   L+ M L G   +V T+N ++ G C L  ++
Sbjct: 208 RHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVR 267

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK----------RIKEVRDLMEKMVNDSNL 313
           +A +L+D M + GC+P  V+Y  ++  LC+ +          R+ EV  +M   V    L
Sbjct: 268 EAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCL 327

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
              +G++  A EL   M   GC PDV TY  +++G C++G    A +ML +M   GC PN
Sbjct: 328 A--EGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPN 385

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            V+Y+  L+  C NG   +AR M++    + ++ N+  Y+ +++ L ++GKL EA  +V+
Sbjct: 386 IVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQ 445

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM  +G  P     N +I  LC   +MD A+      L +G   N + + +LI      G
Sbjct: 446 EMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSG 505

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
             +E L L ++M L     D V+Y  +I AL K G V+ +  L+ +M++KG+ P   +Y 
Sbjct: 506 RWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYN 565

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            +I+  C+ G+V D L+L ++ML++        YN +I  LC  G+   A  +L K+   
Sbjct: 566 MLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNE 625

Query: 612 ASKADASTCHVLVESY 627
               D  T ++L+  +
Sbjct: 626 NVHPDIVTYNILISWH 641



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 205/414 (49%), Gaps = 20/414 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A R++  M   G  C P   +Y  L+    R  +   A  +L  + +     N+++ NT 
Sbjct: 269 AARLVDRMMMHG--CTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEV----NVVMLNTV 322

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I   +   KLA+A    E M   G  P+V TYN L+ G C L R   A++++DEM  KGC
Sbjct: 323 IRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGC 382

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG------------RIEEAKE 325
           +P+ V+Y T++   C+     + R ++++M       + QG            +++EA  
Sbjct: 383 APNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMR 442

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           LV +M   GC PD+ TY  ++   C   ++D+A+ +   +   G   N ++Y   ++ L 
Sbjct: 443 LVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALL 502

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
           H+G+  E   + N         + ++Y+ ++  L +EG +  +  ++ EM+ KG  P   
Sbjct: 503 HSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNF 562

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N+LI  LC+ GK+  A +  +E LN+G   ++V + +LI G C+ G    AL+LL+ +
Sbjct: 563 SYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 622

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
                 PD VTY  +I    K   +++A+ L+ K +S G+VP   T+  ++  +
Sbjct: 623 PNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNF 676



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 179/370 (48%), Gaps = 20/370 (5%)

Query: 141 PIVYYMMLEILSKTKLCQG----AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           P V  +ML  + +  L +G    A  +  +M  +G  C P+  +Y  LM    + G+  +
Sbjct: 312 PEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKG--CPPDVHTYNILMHGLCKLGRCGS 369

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +L  M++   APN++  +T +H          A   L++M   G + N   YN +I 
Sbjct: 370 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIY 429

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---- 310
                 ++ +A++L+ EM  +GC PD  +Y T++ +LC   ++ E   +   ++ +    
Sbjct: 430 ALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVA 489

Query: 311 -----SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                + L H     GR +E   L N+M   GC  DVV+Y  ++   C+ G +D++  +L
Sbjct: 490 NGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLL 549

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           ++M   G KPN  SY   +N LC  GK  +A E+      +  TP+ +TY+ +++GL + 
Sbjct: 550 EEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKV 609

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G    A +++ ++  +   P  V  N+LI   C+   +D A   + + ++ G   N   +
Sbjct: 610 GWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTW 669

Query: 483 TSLIRGFCQK 492
             +++ F ++
Sbjct: 670 GMMVQNFVRQ 679



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 187/383 (48%), Gaps = 21/383 (5%)

Query: 265 AIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND------------S 311
           A+ L+D+MP +   +P   SY  V+  L +     +   L  +M+ D            +
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 GR  +A  L+  M++ GC+PD V Y  V++     G + +A  +L +M   GC 
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            +  ++   + GLC  G   EA  +++       TP+ +TY  ++ GL R  +  EA  +
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           +  + +       V +N +I+    EGK+  A +  +   +KGC  +V  +  L+ G C+
Sbjct: 308 LGRVPEVNV----VMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCK 363

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G    A+ +LD+M      P+ VTY+T++ +  +NG  ++A  ++ +M +KG       
Sbjct: 364 LGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQG 423

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKV 608
           Y  +I+   + G++++ ++L+++M S Q C+     YN +I +LC+   ++EA  I G +
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKS-QGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482

Query: 609 LRTASKADASTCHVLVESYLNKG 631
           L     A+  T + L+ + L+ G
Sbjct: 483 LEEGVVANGITYNTLIHALLHSG 505



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 4/147 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA--YSRAGKLRNAMY 197
           D + Y  +++ L K      +  +L  M  +GI  +P  FSY M+     +AGK+R+A+ 
Sbjct: 525 DVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGI--KPNNFSYNMLINELCKAGKVRDALE 582

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M    + P+++  NT I+ L        AL  LE++    + P+++TYN LI  +C
Sbjct: 583 LSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHC 642

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            +  + DA  L+D+    G  P++ ++
Sbjct: 643 KVRLLDDASMLLDKAVSGGIVPNERTW 669


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 155/501 (30%), Positives = 259/501 (51%), Gaps = 20/501 (3%)

Query: 167 MARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           M R G E  P+  SY  L+     +G    A++V   M++    PN++  NT I  L   
Sbjct: 189 MVRSGHE--PDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKD 246

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             +  A+ FL  M   GI P+ +TYN ++ G C L ++ +A +L   M   GC PD V+Y
Sbjct: 247 RLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTY 306

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQ---GRIEEAKELVNQMSQ 332
             ++  L K++ + +  D + +MV+          + + H     G++ EA  L  +M Q
Sbjct: 307 NIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ 366

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            GC PDVV Y  +++  C+   ++ A + L +M   G  PN V+Y+  L+G C+ G+  E
Sbjct: 367 KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A ++          PN +T+S+++ GL +EG +SEA  V   M +KG  P     N L+ 
Sbjct: 427 ATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMN 486

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
             C   KM+ A+K  +  + KGCA ++ ++  LI G+C    +++A +LL  M + K  P
Sbjct: 487 GYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTP 546

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           +TVTY TI+  L   GR+ +A EL  KM S G++PT++TY  +++  C+ G +++ LKL 
Sbjct: 547 NTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLF 606

Query: 573 EKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           + M  K  +     Y  +IE +   G LE A  +  K+     +    T +V+++  L +
Sbjct: 607 KSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKE 666

Query: 631 GIPLLAYKV--ACRMFNRNLI 649
           G+   AY++    +M   N+I
Sbjct: 667 GLSDEAYELFRKWKMMKHNVI 687



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 232/470 (49%), Gaps = 29/470 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA--GKLRNAMYVL 199
           + Y  +++ L K +L   A   L  M  RGI   P+A +Y  + +     G+L  A  + 
Sbjct: 234 VTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIP--PDAITYNSIVHGLCCLGQLNEATRLF 291

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++    P+++  N  I  L     +  A  FL  M   GI P+V+TY  ++ G C L
Sbjct: 292 KRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYL 351

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            ++ +AI+L  +M  KGC PD V+Y T++  LCK           +++VND         
Sbjct: 352 GQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCK-----------DRLVND--------- 391

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
              A E +++M   G  P+ VTY+ +++GFC +G+LD+A ++ ++M      PNT++++ 
Sbjct: 392 ---AMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSI 448

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++GLC  G   EAR +  T  E+   PN  TY+ +M+G     K++EA  V   MV KG
Sbjct: 449 LVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKG 508

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     N+LI   C   +MD AK  + +   K    N V + ++++G C  G L +A 
Sbjct: 509 CAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQ 568

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            L   M      P  +TY+ +++ L K+G ++EA +L   M  K L P ++ Y  +I   
Sbjct: 569 ELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGM 628

Query: 560 CQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
              G++E    L  K+ +   Q     YN +I+ L   G  +EA ++  K
Sbjct: 629 FIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 148/574 (25%), Positives = 269/574 (46%), Gaps = 50/574 (8%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           MAR         F   + + ++  +    +Y+ + M    V   +   N  I+ L   N 
Sbjct: 84  MARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNH 143

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +  A+    +M   GI P+V+T+  LI G C+  +IK A++L +EM   G  PD +SY T
Sbjct: 144 VDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNT 203

Query: 287 VMGYLCKEKRIKEVRDLMEKM--------VNDSNLFHDQ----GRIEEAKELVNQMSQMG 334
           ++  LC          + +KM        V   N   D       + +A + +++M   G
Sbjct: 204 LINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG 263

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             PD +TY ++V+G C +G+L++A ++ ++M  +GCKP+ V+Y   ++ L  +    +A 
Sbjct: 264 IPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAA 323

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           + ++   ++   P+ +TY+ ++HGL   G+L+EA  + ++M +KG  P  V  N +I SL
Sbjct: 324 DFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSL 383

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C++  ++ A +F+ E +++G   N V +++++ GFC  G L+EA  L  +M      P+T
Sbjct: 384 CKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNT 443

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           +T++ ++D L + G V EA  +   M  KG+ P + TY  +++ YC   ++ +  K+ E 
Sbjct: 444 LTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEI 503

Query: 575 MLSK--------------QKCRT-----------------------AYNQVIENLCSFGY 597
           M+ K                C +                        YN +++ LC  G 
Sbjct: 504 MVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGR 563

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
           L +A ++  K+  +       T  +L+      G    A K+   M  + L PD+ L   
Sbjct: 564 LLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTI 623

Query: 658 VSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
           + E + + GK E A  L  +    G IQP    +
Sbjct: 624 LIEGMFIGGKLEVAKGLFSKLSADG-IQPPGRTY 656



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 207/414 (50%), Gaps = 16/414 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMY 197
           D I Y  ++  L        A R+ + M + G  C+P+  +Y ++  S  +   + +A  
Sbjct: 267 DAITYNSIVHGLCCLGQLNEATRLFKRMEQNG--CKPDVVTYNIIIDSLYKDRLVNDAAD 324

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            LS M    + P+++   T +H L    +L +A+R  ++M+  G  P+V+ YN +I   C
Sbjct: 325 FLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLC 384

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH-- 315
               + DA++ + EM  +G  P+ V+Y T++   C   ++ E   L ++MV  + + +  
Sbjct: 385 KDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTL 444

Query: 316 ----------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                      +G + EA+ +   M++ G  P++ TY A++NG+C   ++++A+K+ + M
Sbjct: 445 TFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIM 504

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              GC P+  SY   +NG C++ +  +A+ ++     +  TPN +TY+ +M GL   G+L
Sbjct: 505 VGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRL 564

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A ++ ++M   G  PT +  ++L+  LC+ G +D A K  +    K    +++ +T L
Sbjct: 565 LDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTIL 624

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           I G    G LE A  L   +      P   TY  +I  L K G  +EA EL  K
Sbjct: 625 IEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 160/552 (28%), Positives = 268/552 (48%), Gaps = 10/552 (1%)

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV-APNLLICNTA 217
           G +  L+ M  RG+ C  +A    + A++RAG    A+             P + + N  
Sbjct: 16  GVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHL 75

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +  L+  N +   +   + M+ AG+ PNV TYN LI+  C   R+  A K++DEM  KGC
Sbjct: 76  LDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGC 135

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH-------DQGRIEEAKELVNQM 330
            PD+VS+ T++  +CK  R++E R  + + V     ++        + R+ E   +VN+M
Sbjct: 136 HPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEM 195

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            Q G  P+VVTYT +V+ FC+  EL  A  +L +M   GC PN +++TA + G   +GK 
Sbjct: 196 VQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKV 255

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            +A  M +   +E W P+ I+Y+V++ GL   G L  A D    M +    P     + L
Sbjct: 256 HDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTL 315

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           +      G +DGA     E  + GC  NVV +T++I   C+K   ++A SL+D M +   
Sbjct: 316 VDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNC 375

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P+TVT+ T+I  L   GRV  A  +   M   G  P   TY  ++H   + G  +D   
Sbjct: 376 PPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFA 435

Query: 571 LLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           ++ +ML+   +     YN VI  LC     + A  +LG+++    + DA T + ++ +Y 
Sbjct: 436 MVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYC 495

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
            +G   +A  +  +M   N   ++     +   L  +GK   A   +L+ +  G    ++
Sbjct: 496 KEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEA 555

Query: 689 EEHLQRQRVFLN 700
             ++  + +F N
Sbjct: 556 TWNVLVRAIFTN 567



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 200/484 (41%), Gaps = 41/484 (8%)

Query: 51  DSFDKYRVNREEIRRVVLEEDEFRH-PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPR 109
           D  D  R   +E+ R     DE  H  +V  +C+L  +          E R  L    P 
Sbjct: 118 DRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVE---------EARGFLAETVPV 168

Query: 110 QIC--AVLRSQADERVALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLR 165
           Q    AV+ +   E    + F   +   +    P  + Y  +++   K +  + A  +L 
Sbjct: 169 QASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILA 228

Query: 166 LMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
            M   G  C P    F+ L+  +   GK+ +A+ +   M     AP+ +  N  I  L  
Sbjct: 229 RMVSMG--CTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCC 286

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
              L  AL F   M+   + PN  TY+ L+ G+ +   +  A+ + +EM   GC P+ V 
Sbjct: 287 IGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVV 346

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           Y  ++  LCK+    +   L++KM+ D+                       C P+ VT+ 
Sbjct: 347 YTNMIDVLCKKMMFDQAESLIDKMLMDN-----------------------CPPNTVTFN 383

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            ++   C  G + +A  +   M  +GC PN  +Y   L+GL   G   +A  M+      
Sbjct: 384 TLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNN 443

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
            +  + +TY+ V++ L +      A  ++  M+ +G  P     N +I + C+EGK+  A
Sbjct: 444 GFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIA 503

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
              + +     C  NVV +T LI   C +G L  A+  L  M      P+  T+  ++ A
Sbjct: 504 ACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRA 563

Query: 524 LSKN 527
           +  N
Sbjct: 564 IFTN 567


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 157/591 (26%), Positives = 292/591 (49%), Gaps = 49/591 (8%)

Query: 41  SDSDDHFMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELR 100
           S  DD+ +VLD FD  R+ R+              P +  +C ++++  A S  L    R
Sbjct: 102 SIRDDYKLVLDFFDWARLRRD--------------PSLESLCIVVQIAVA-SKDLRMAHR 146

Query: 101 NLLRSL-KPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQG 159
            +     KP         +  ER+   +  W          P+V+ +  ++L +  L   
Sbjct: 147 LVFEFWEKPHLDVGNSFDRFTERLIYTYKDWGAH-------PLVFDVFFQVLVEAGLLLE 199

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRA-GKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
           A ++   +   G+    ++ +  +   S +   +R A  V     +  V  N +  N  +
Sbjct: 200 AGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIIL 259

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
           H+L    K+ +A   L +M+  G  P+V++Y+ ++ GYC + ++   +KL++E+  KG  
Sbjct: 260 HLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLK 319

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPD 338
           P++ +Y +++ +LCK                        GR+ EA++++  M      PD
Sbjct: 320 PNQYTYNSIISFLCK-----------------------TGRVVEAEQVLRVMKNQRIFPD 356

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            V YT +++GF + G +    K+  +M      P+ V+YT+ ++GLC  GK +EAR++ +
Sbjct: 357 NVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFS 416

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
               +   P+ +TY+ ++ G  + G++ EA  +  +MV+KG  P  V    L+  LC+ G
Sbjct: 417 EMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCG 476

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           ++D A + + E   KG   NV  + +LI G C+ G++E+A+ L+++M L    PDT+TYT
Sbjct: 477 EVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYT 536

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           TI+DA  K G + +A EL+  ML KGL PT+VT+  +++ +C  G +ED  +L++ ML K
Sbjct: 537 TIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDK 596

Query: 579 --QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
                 T +N +++  C    +    +I   +       D +T ++L++ +
Sbjct: 597 GIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGH 647



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 230/448 (51%), Gaps = 12/448 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y ++L +L +    + A  +L  M  RG      ++S ++  Y +  +L   + ++
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +Q+  + PN    N+ I  L    ++ +A + L  M+   I P+ + Y  LI G+   
Sbjct: 311 EELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKS 370

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
             +    KL DEM  K   PD V+Y +++  LC+  ++ E R L  +M++          
Sbjct: 371 GNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               + +   G ++EA  L NQM + G  P+VVTYTA+V+G C+ GE+D A ++L +M  
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G +PN  +Y A +NGLC  G   +A +++   +   + P+ ITY+ +M    + G++++
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAK 550

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A +++R M+ KG  PT V  N+L+   C  G ++  ++ ++  L+KG   N   F SL++
Sbjct: 551 AHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMK 610

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            +C + ++   + +   M+     PDT TY  +I    K   ++EA  L  +M+ KG   
Sbjct: 611 QYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSL 670

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           T  +Y ++I  + +  + E+  KL E+M
Sbjct: 671 TAASYNSLIKGFYKRKKFEEARKLFEEM 698



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 3/371 (0%)

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           I  A  +  + S++G   + V+Y  +++  C++G++ +A  +L QM   G  P+ VSY+ 
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G C   +  +  +++   + +   PN  TY+ ++  L + G++ EA  V+R M  + 
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
            FP  V    LI    + G +    K   E   K    + V +TS+I G CQ G + EA 
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            L  +M      PD VTYT +ID   K G ++EA  L  +M+ KGL P VVTY  ++   
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472

Query: 560 CQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C+ G V+   +LL +M  K  Q     YN +I  LC  G +E+A K++ ++       D 
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDT 532

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLR 677
            T   ++++Y   G    A+++   M ++ L P +     +     + G  E+ + L+  
Sbjct: 533 ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKW 592

Query: 678 FVERGHIQPKS 688
            +++G I P +
Sbjct: 593 MLDKG-IMPNA 602



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 166/365 (45%), Gaps = 23/365 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  M+  L +      A+++   M  +G++     ++ L+  Y +AG+++ A  + 
Sbjct: 391 DFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLH 450

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M +  + PN++     +  L    ++  A   L  M   G+ PNV TYN LI G C +
Sbjct: 451 NQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKV 510

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             I+ A+KL++EM L G  PD ++Y T+M   CK                        G 
Sbjct: 511 GNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCK-----------------------MGE 547

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           + +A EL+  M   G  P +VT+  ++NGFC  G L+  +++++ M   G  PN  ++ +
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNS 607

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +   C         E+      +   P+  TY++++ G  +   + EA  + +EMV+KG
Sbjct: 608 LMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKG 667

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           F  T    N LI+   +  K + A+K  +E    G       +   +    ++G+ E  L
Sbjct: 668 FSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTL 727

Query: 500 SLLDD 504
            L D+
Sbjct: 728 ELCDE 732


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 247/454 (54%), Gaps = 19/454 (4%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G+L   +  L  M      P+++ C + I       K  KA R +E ++ +G  P+V+
Sbjct: 118 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVI 177

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN LI GYC    I  A+++++ M +   +PD V+Y T++  LC   ++KE  +++++ 
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERMSV---APDVVTYNTILRSLCDSGKLKEAMEVLDRQ 234

Query: 308 VN-----DSNLF--------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
           +      D   +        +D G + +A +L+++M + GC PDVVTY  ++NG C+ G 
Sbjct: 235 LQRECYPDVITYTILIEATCNDSG-VGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGR 293

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           LD+A K L  M  +GCKPN +++   L  +C  G+ ++A  +++    +  +P+ +T+++
Sbjct: 294 LDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNI 353

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           +++ L R+  L  A DV+ +M K G  P  +  N L+   C+E KMD A ++++  +++G
Sbjct: 354 LINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 413

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           C  ++V + +L+   C+ G ++ A+ +L+ +      P  +TY T+ID L+K G+ E A 
Sbjct: 414 CYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAV 473

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENL 592
           EL+ +M  KGL P ++TY T++    + G+V++ +K+   M  LS +     YN ++  L
Sbjct: 474 ELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 533

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           C       A   L  ++    K   +T  +L+E 
Sbjct: 534 CKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 226/437 (51%), Gaps = 32/437 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A R++ ++   G    P+  +Y  L+  Y ++G++  A+ VL  M   +VAP+++  NT 
Sbjct: 160 ATRIMEILENSG--AVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTI 214

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +  L    KL +A+  L+R       P+V+TY  LI+  C+   +  A+KL+DEM  KGC
Sbjct: 215 LRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGC 274

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
            PD V+Y  ++  +CKE                       GR++EA + +N M   GC P
Sbjct: 275 KPDVVTYNVLINGICKE-----------------------GRLDEAIKFLNNMPSYGCKP 311

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           +V+T+  ++   C  G    A+++L  M   GC P+ V++   +N LC       A +++
Sbjct: 312 NVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVL 371

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
               +    PN+++Y+ ++HG  +E K+  A + +  MV +G +P  V  N L+ +LC++
Sbjct: 372 EKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKD 431

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           GK+D A + + +  +KGC+  ++ + ++I G  + G  E A+ LL++M      PD +TY
Sbjct: 432 GKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITY 491

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           +T++  L + G+V+EA ++   M    + P+ VTY  ++   C+  +    +  L  M+ 
Sbjct: 492 STLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVE 551

Query: 578 K--QKCRTAYNQVIENL 592
           K  +     Y  +IE +
Sbjct: 552 KGCKPTEATYTILIEGI 568



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 207/409 (50%), Gaps = 27/409 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  +L  L  +   + A  VL    +R  EC P+  +Y  L+ A      +  AM 
Sbjct: 207 DVVTYNTILRSLCDSGKLKEAMEVLDRQLQR--ECYPDVITYTILIEATCNDSGVGQAMK 264

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M+K    P+++  N  I+ +    +L +A++FL  M   G  PNV+T+N +++  C
Sbjct: 265 LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMC 324

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              R  DA +L+ +M  KGCSP  V++  ++ +LC+++ +    D++EK           
Sbjct: 325 STGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEK----------- 373

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
                       M + GC+P+ ++Y  +++GFC+  ++D+A + L+ M   GC P+ V+Y
Sbjct: 374 ------------MPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTY 421

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              L  LC +GK   A E++N    +  +P  ITY+ V+ GL + GK   A +++ EM +
Sbjct: 422 NTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRR 481

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P  +  + L++ L REGK+D A K   +        + V + +++ G C+      
Sbjct: 482 KGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSR 541

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           A+  L  M      P   TYT +I+ ++  G  EEA EL+ ++ S+G V
Sbjct: 542 AIDFLAYMVEKGCKPTEATYTILIEGIADEGLAEEALELLNELCSRGFV 590


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 268/521 (51%), Gaps = 19/521 (3%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C+P+AF++  L+    R+ +L  A  +L  M++    P+  I N  I          +A 
Sbjct: 6   CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
           +FL  M      P V+TY  ++ G C   R KDA+KL+DEM  KGCSP+  +Y  ++  L
Sbjct: 66  KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125

Query: 292 CKEKRIKEVRDLMEKM--------VNDSNLFHDQ----GRIEEAKELVNQMSQMGCIPDV 339
           C+E+++ E + ++E+M        V   N F        R++EA++    +++M   PDV
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDV 182

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           V+YT V+NG C+ G+LD A +ML QM + GC P+ V+Y++ ++G C  G+   A  ++++
Sbjct: 183 VSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 242

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             +    PN + Y+ ++  L R G + +A D++ EM ++GF P  V  N  I  LC+  +
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +  AK      + +GC  N  +++ L+   C+K +L++A++L++      +  D + YT 
Sbjct: 303 VKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTV 362

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLV-PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           ++D L K GR +EA  L  K+L + +  P V  Y  ++  +C+  +++  L++ ++ML +
Sbjct: 363 LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLER 422

Query: 579 QKCR-TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
             C    +N ++  LC    L +A  +L  ++      D  T   LV++    G    A 
Sbjct: 423 NCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAAL 482

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           ++         +PD+     +   L+ E  +EEA  L  + 
Sbjct: 483 ELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 523



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 191/359 (53%), Gaps = 30/359 (8%)

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
           K C PD  ++  ++  LC+                         ++E+A++L+ +M +MG
Sbjct: 4   KSCQPDAFTFAILLRGLCRSN-----------------------QLEKARQLLGRMKEMG 40

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C+PD   Y A+++G+ +  +  QA K L +M  + C P  V+YT  ++GLC  G++ +A 
Sbjct: 41  CVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAV 100

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           ++++   ++  +PN  TY+V++ GL  E KL EA  ++ EM  +G+FP  V  N  I+ L
Sbjct: 101 KLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGL 160

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+  ++D A+KF+          +VV++T++I G C+ GDL+ A  +LD M      PD 
Sbjct: 161 CKCDRVDEARKFLAR---MPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDV 217

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV---IHRYCQVGRVEDLLKL 571
           VTY+++ID   K G VE A  L+  ML  G  P +V Y ++   +HR   +G+ ED+L  
Sbjct: 218 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 277

Query: 572 LEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           +E+         +YN  I+ LC    +++A  +  +++      +AS+  +LVE    K
Sbjct: 278 MERRGFTPDV-VSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKK 335



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 197/416 (47%), Gaps = 36/416 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  ++  L K+     A R+L  M  RG  C P+  +Y  L+  + + G++  AM 
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRG--CTPDVVTYSSLIDGFCKGGEVERAMG 238

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M K    PN++  N+ +  L     + KA   L  M+  G TP+V++YN  I G C
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 298

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              R+K A  + D M  +GC+P+  SY  ++  LCK+K                      
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKK---------------------- 336

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVS 376
             +++A  LV Q  +   I D++ YT +++G C+ G  D+A  +  ++     C+P+   
Sbjct: 337 -ELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFF 395

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   L+  C   + ++    I+    E    N +T+++++HGL  + +LS+A  ++  MV
Sbjct: 396 YNVMLDSHCKR-RQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMV 454

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            +GF P  V    L+ ++C+ GK   A +  +E +  GC  +VV +++LI G   +   E
Sbjct: 455 DEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAE 514

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           EA       YL     D   +  +I   ++NG  +   +L ++++   + P   T+
Sbjct: 515 EA-------YLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTF 563



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 7/321 (2%)

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M    C+P+  ++   L GLC + +  +AR+++   +E    P+   Y+ ++ G  +   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             +A   + EMVK    PT V    ++  LC+ G+   A K + E  +KGC+ N+  +  
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           ++ G C++  L+EA  +L++M +    PD VTY + I  L K  RV+EA + + +M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEA 601
           + P VV+Y TVI+  C+ G ++   ++L++M + + C      Y+ +I+  C  G +E A
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQM-TNRGCTPDVVTYSSLIDGFCKGGEVERA 236

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
             +L  +L+   + +    + L+ +    G    A  +   M  R   PD+       + 
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 296

Query: 662 LILEGKSEEADTLMLRFVERG 682
           L    + ++A  +  R VERG
Sbjct: 297 LCKAERVKKAKAVFDRMVERG 317



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/406 (23%), Positives = 159/406 (39%), Gaps = 80/406 (19%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
           D + Y  +++   K    + A  +L  M + G  CRP   A++ L+ A  R G +  A  
Sbjct: 216 DVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG--CRPNMVAYNSLLGALHRLGHIGKAED 273

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN------------ 245
           +L  M++    P+++  N  I  L    ++ KA    +RM   G TPN            
Sbjct: 274 MLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELC 333

Query: 246 -----------------------VLTYNCLIKGYCDLHRIKDAIKLIDE-MPLKGCSPDK 281
                                  +L Y  L+ G C   R  +A  L  + +  K C PD 
Sbjct: 334 KKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDV 393

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDSNLFHD---QGRIEEAKELVNQM 330
             Y  ++   CK ++I +   + ++M        V  + L H      R+ +A+ ++  M
Sbjct: 394 FFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTM 453

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              G IPD VTY  +V+  C+ G+   A ++ ++    GC P+ V+Y+A + GL H   +
Sbjct: 454 VDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMA 513

Query: 391 LEAREMINTSEEEWWT----------------------------PNAITYSVVMHG-LRR 421
            EA  +    +   W                             PNA T+   + G L +
Sbjct: 514 EEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVK 573

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
              L +A  +    VK GFFP     N LI    + G ++ A++  
Sbjct: 574 AESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIF 619


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/535 (29%), Positives = 261/535 (48%), Gaps = 11/535 (2%)

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM--YVLSMMQKAAVAPNLLICNT 216
           G +  L+ M  RG+ C   A    + A++RAG    A+  +  +       AP + + N 
Sbjct: 73  GVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNH 132

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            +  L+  N +A  +   + M+ AG+ PNV TYN LIK  C   R+  A +++DEM  KG
Sbjct: 133 LLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKG 192

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH-------DQGRIEEAKELVNQ 329
           C PD+VS+ T++  LCK  R+ E R ++ +M      ++        Q R+ E   +V++
Sbjct: 193 CRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDE 252

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M   G  PD V YT++V  FC+  EL  A  +L +M   GC PN  ++T  + G   +GK
Sbjct: 253 MVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGK 312

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A  M N    E W P+ I+Y+V++ GL   G L  A  V   M K    P     + 
Sbjct: 313 VHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYST 372

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI    + G +D A     +  N GC  NVV +T+++   C+K   ++A +L+D M L  
Sbjct: 373 LIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLEN 432

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P+T+T+ T+I +L   GR   A  +   M   G  P   TY  ++H   + G  ED L
Sbjct: 433 CPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDAL 492

Query: 570 KLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           ++L +ML+   +    +YN  I  LC    ++EA  +LG+++    + DA T + ++ +Y
Sbjct: 493 RMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAY 552

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             +G    A  +  RM   N   ++     +   L  + K ++A   +L+ +  G
Sbjct: 553 CKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEG 607



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 247/548 (45%), Gaps = 69/548 (12%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHD-----PIV--YYMMLEILSKTKLCQGAKRV 163
           ICA  R+ A +R AL+ FY      R RHD     P V  Y  +L+ L +  L      V
Sbjct: 97  ICAFARAGAADR-ALKTFY------RARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPV 149

Query: 164 LRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
              M + G+E     ++ L+ A  +  ++  A  +L  M +    P+ +   T I  L  
Sbjct: 150 YDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCK 209

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
            ++L +A     R  LA +TP   +YN ++   C   R+++   ++DEM  +G  PD V+
Sbjct: 210 LDRLDEA-----RGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVA 264

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQM- 330
           Y +++G  CK + ++    ++ +MV +  +            F D G++ +A  + N M 
Sbjct: 265 YTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMV 324

Query: 331 -------------------------------SQMG---CIPDVVTYTAVVNGFCRVGELD 356
                                          S MG   C+PDV TY+ +++GF + G+LD
Sbjct: 325 AEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLD 384

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
            A  +   M + GCKPN V YT  ++ LC      +A  +I+    E   PN +T++ ++
Sbjct: 385 VAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLI 444

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
             L   G+   A +V   M + G  P     N L+  L REG  + A + + E LN G  
Sbjct: 445 RSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFE 504

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
           +++V++ + I G CQ   ++EA+ LL  M +    PD  T+  II A  K G V  A  +
Sbjct: 505 LSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWM 564

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFG 596
           + +M +      +V Y +++   C   +++D +  L KML +  C    N+   N+   G
Sbjct: 565 LGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICP---NEATWNVLVRG 621

Query: 597 YLEEAGKI 604
                G I
Sbjct: 622 IFTHLGTI 629



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 108/469 (23%), Positives = 198/469 (42%), Gaps = 37/469 (7%)

Query: 61  EEIRRVVLEEDEFRHP-LVREVCRLIELRSAWSPKLEGELRNLLRSLKP--RQICAVLRS 117
           +E+ R     DE  H  ++  +C+L  L          E R +L  + P      AV+ +
Sbjct: 186 DEMARKGCRPDEVSHTTIISALCKLDRL---------DEARGILAEMTPVGASYNAVVHA 236

Query: 118 QADERVALQFFYWADRQWR--YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECR 175
              +    + F   D       R D + Y  ++    K +  + A  +L  M   G    
Sbjct: 237 LCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPN 296

Query: 176 PEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
            + F+ L+  +   GK+ +A+ + + M     AP+ +  N  I  L     L +AL    
Sbjct: 297 VQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFS 356

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            M  +   P+V TY+ LI G+     +  A+ + ++M   GC P+ V Y  ++  LCK+ 
Sbjct: 357 CMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKK- 415

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                            +  DQ     A+ L+++MS   C P+ +T+  ++   C +G  
Sbjct: 416 -----------------VMFDQ-----AENLIDKMSLENCPPNTLTFNTLIRSLCDLGRA 453

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
            +A  +   M  +GC PN  +Y   L+GL   G   +A  M+       +  + ++Y+  
Sbjct: 454 GRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTT 513

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + GL +   + EA  ++  M+ +G  P     N +I + C+EG +  A   +       C
Sbjct: 514 ISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNC 573

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             N+V +TSL+ G C +  L++A+  L  M      P+  T+  ++  +
Sbjct: 574 PRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 17/209 (8%)

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           ++ L   G +DG +  +QE   +G A       + I  F + G  + AL      Y  + 
Sbjct: 62  VRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTF---YRARH 118

Query: 511 D-----PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
           D     P    Y  ++DAL +   V     +   M   G+ P V TY  +I   CQ  RV
Sbjct: 119 DLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRV 178

Query: 566 EDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
               ++L++M +++ CR    ++  +I  LC    L+EA  IL ++    +  +A   H 
Sbjct: 179 GAARRMLDEM-ARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNA-VVHA 236

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           L   +  + +    + V   M +R L PD
Sbjct: 237 LCGQFRMREV----FLVVDEMVHRGLRPD 261


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 164/591 (27%), Positives = 287/591 (48%), Gaps = 53/591 (8%)

Query: 45   DHFMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLR 104
            D+ +VLD FD  R  R+                +  +C +I L  A S  L+   ++L+ 
Sbjct: 523  DYRLVLDFFDWARSRRDSN--------------LESLCIVIHLAVA-SKDLK-VAQSLIS 566

Query: 105  SLKPRQICAVLRSQADERVALQFF---YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAK 161
            S   R    V  S       +QFF    +  + W    DP V+ +  ++L +  +   A+
Sbjct: 567  SFWERPKLNVTES------FVQFFDLLVYTYKDWG--SDPRVFDVFFQVLVEFGMLPEAR 618

Query: 162  RVLRLMARRGIECRPEAFSYLMVAYSR-AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
            +V   M   G+    ++ +  +   S+   K   A+ V     +  V  N+   N  IH 
Sbjct: 619  KVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHF 678

Query: 221  LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
            +    ++ +A   L  M+L G TP+V++Y+ +I GYC    +    KLI++M  KG  P+
Sbjct: 679  VCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPN 738

Query: 281  KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
              +Y +++G LC+                         ++ EA+E  ++M   G +PD +
Sbjct: 739  SYTYGSIIGLLCR-----------------------ICKLAEAEEAFSEMIGQGILPDTI 775

Query: 341  TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
             YT +V+GFC+ G++  A K   +M+     P+ ++YTA ++G C  G  +EA ++ +  
Sbjct: 776  VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835

Query: 401  EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
                  P+ IT++ +M+G  + G + +A  V   M++ G  P  V    LI  LC+EG +
Sbjct: 836  LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895

Query: 461  DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
            D A + + E    G   N+  + S++ G C+ G++EEA+ L+ +      + DTVTYTT+
Sbjct: 896  DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955

Query: 521  IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-- 578
            +DA  K+G +++A E++ +ML KGL PT+VT+  +++ +C  G +ED  KLL  ML+K  
Sbjct: 956  MDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1015

Query: 579  QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
                T +N +++  C    L+ A  I   +     + D  T   LV+ + N
Sbjct: 1016 APNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCN 1066



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 218/444 (49%), Gaps = 12/444 (2%)

Query: 144  YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
            Y +++  + +      A  +L LM  +G      ++S ++  Y R G+L     ++  M+
Sbjct: 672  YNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMK 731

Query: 204  KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
            +  + PN     + I +L    KLA+A      M   GI P+ + Y  L+ G+C    I+
Sbjct: 732  QKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIR 791

Query: 264  DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------ 311
             A K   EM  +  +PD ++Y  ++   C+   + E   L  +M+               
Sbjct: 792  AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELM 851

Query: 312  NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
            N +   G I++A  + N M Q GC P+VVTYT +++G C+ G+LD A ++L +M+  G +
Sbjct: 852  NGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 911

Query: 372  PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            PN  +Y + +NGLC +G   EA +++   E      + +TY+ +M    + G++ +A ++
Sbjct: 912  PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 971

Query: 432  VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
            + EM+ KG  PT V  N+L+   C  G ++  +K +   L KG A N   F  L++ +C 
Sbjct: 972  LTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCI 1031

Query: 492  KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            + +L+ A ++  DM     +PD  TY  ++        ++EA  L  +M  KG   +V T
Sbjct: 1032 RNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVST 1091

Query: 552  YRTVIHRYCQVGRVEDLLKLLEKM 575
            Y  +I  + +  +  +  ++ ++M
Sbjct: 1092 YSVLIKGFFKRKKFVEAREIFDQM 1115



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 202/408 (49%), Gaps = 18/408 (4%)

Query: 297  IKEVRDLMEKMVN-------DS------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
            + E R + EKM+N       DS       L  D  +   A  +  +  ++G   +V +Y 
Sbjct: 614  LPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYN 673

Query: 344  AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
             V++  C++G +++A  +L  M   G  P+ +SY+  +NG C  G+  +  ++I   +++
Sbjct: 674  IVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQK 733

Query: 404  WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
               PN+ TY  ++  L R  KL+EA +   EM+ +G  P  +    L+   C+ G +  A
Sbjct: 734  GLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAA 793

Query: 464  KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK-DPDTVTYTTIID 522
             KF  E  ++    +V+ +T++I GFCQ GD+ EA  L  +M LC+  +PD +T+T +++
Sbjct: 794  SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM-LCRGLEPDIITFTELMN 852

Query: 523  ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQK 580
               K G +++A  +   M+  G  P VVTY T+I   C+ G ++   +LL +M  +  Q 
Sbjct: 853  GYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 912

Query: 581  CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
                YN ++  LC  G +EEA K++G+       AD  T   L+++Y   G    A ++ 
Sbjct: 913  NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 972

Query: 641  CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
              M  + L P +     +     L G  E+ + L+   + +G I P +
Sbjct: 973  TEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPNA 1019



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 180/419 (42%), Gaps = 51/419 (12%)

Query: 118  QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
            + D R A +FFY    +     D + Y  ++    +      A ++   M  RG+E    
Sbjct: 787  RGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDII 845

Query: 178  AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
             F+ LM  Y +AG +++A  V + M +A  +PN++   T I  L     L  A   L  M
Sbjct: 846  TFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 905

Query: 238  QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
               G+ PN+ TYN ++ G C    I++A+KL+ E    G + D V+Y T+M   CK    
Sbjct: 906  WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK---- 961

Query: 298  KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                                G +++A+E++ +M   G  P +VT+  ++NGFC  G L+ 
Sbjct: 962  -------------------SGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLED 1002

Query: 358  AKKMLQQMYHHGCKPNTVSYTAFLNGLC--HNGKSLEA--REMINTSEEEWWTPNAITYS 413
             +K+L  M   G  PN  ++   +   C  +N K+  A  ++M +   E    P+  TY 
Sbjct: 1003 GEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVE----PDGKTYE 1058

Query: 414  VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
             ++ G      + EA  + +EM  KGF  +    ++LI+   +  K   A++   +    
Sbjct: 1059 NLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRD 1118

Query: 474  GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            G A +                 +E      D     K PDT+     ID + +N  V+E
Sbjct: 1119 GLAAD-----------------KEIFDFFSDTKYKGKRPDTI--VDPIDEIIENYLVDE 1158


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 178/630 (28%), Positives = 294/630 (46%), Gaps = 57/630 (9%)

Query: 83  RLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPI 142
           RL+ + S  +      L++++ ++ P  + ++     D + AL F +W  +  RY+H   
Sbjct: 65  RLLSILSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVY 124

Query: 143 VYYMMLEILSKT--------------KLCQG---AKRVLRLMARRGIECRPE-------- 177
            Y  +L +L                 K C     A  VL L  +   + R E        
Sbjct: 125 SYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIG 184

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            ++ L+ + +R G +     V   M +  V PN+   N  ++       + +A +++ ++
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
             AG+ P+  TY  LI GYC    +  A K+ +EMPLKGC  ++V+Y  ++  LC  +RI
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
            E  DL  KM +D                        C P V TYT ++   C      +
Sbjct: 305 DEAMDLFVKMKDDE-----------------------CFPTVRTYTVLIKSLCGSERKSE 341

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  ++++M   G KPN  +YT  ++ LC   K  +ARE++    E+   PN ITY+ +++
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  + G + +A DVV  M  +   P     N LI+  C+   +  A   + + L +    
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLP 460

Query: 478 NVVNFTSLIRGFCQKGDLEEA---LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           +VV + SLI G C+ G+ + A   LSL++D  L    PD  TYT++ID+L K+ RVEEA 
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV---PDQWTYTSMIDSLCKSKRVEEAC 517

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENL 592
           +L   +  KG+ P VV Y  +I  YC+ G+V++   +LEKMLSK        +N +I  L
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C+ G L+EA  +  K+++   +   ST  +L+   L  G    AY    +M +    PD 
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
                  +    EG+  +A+ +M +  E G
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENG 667



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 197/405 (48%), Gaps = 26/405 (6%)

Query: 173 ECRPEAFSYLMVAYSRAGKLRN--AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           EC P   +Y ++  S  G  R   A+ ++  M++  + PN+      I  L    K  KA
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
              L +M   G+ PNV+TYN LI GYC    I+DA+ +++ M  +  SP+  +Y  ++  
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            CK                          + +A  ++N+M +   +PDVVTY ++++G C
Sbjct: 438 YCK------------------------SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           R G  D A ++L  M   G  P+  +YT+ ++ LC + +  EA ++ ++ E++   PN +
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            Y+ ++ G  + GK+ EA  ++ +M+ K   P  +  N LI  LC +GK+  A    ++ 
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           +  G    V   T LI    + GD + A S    M      PD  TYTT I    + GR+
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            +A ++M KM   G+ P + TY ++I  Y  +G+      +L++M
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 233/510 (45%), Gaps = 45/510 (8%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y ++++ L      + A+ +L  M  +G+      ++ L+  Y + G + +A+ V+ +M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
           +   ++PN    N  I      N + KA+  L +M    + P+V+TYN LI G C     
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
             A +L+  M  +G  PD+ +Y +++  LCK KR+                       EE
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV-----------------------EE 515

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A +L + + Q G  P+VV YTA+++G+C+ G++D+A  ML++M    C PN++++ A ++
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC +GK  EA  +     +    P   T ++++H L ++G    A    ++M+  G  P
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
                   IQ+ CREG++  A+  M +    G + ++  ++SLI+G+   G    A  +L
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695

Query: 503 DDMYLCKKDPDTVTYTTIID------------------ALSKNGRVEEATELMMKMLSKG 544
             M     +P   T+ ++I                   A+S     +   EL+ KM+   
Sbjct: 696 KRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHS 755

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEA 601
           + P   +Y  +I   C+VG +    K+ + M   +    +   +N ++   C      EA
Sbjct: 756 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 815

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKG 631
            K++  ++         +C VL+     KG
Sbjct: 816 AKVVDDMICVGHLPQLESCKVLICGLYKKG 845



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 216/518 (41%), Gaps = 71/518 (13%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  ++    K  + + A  V+ LM  R +      ++ L+  Y ++  +  AM VL+ 
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNK 452

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  V P+++  N+ I           A R L  M   G+ P+  TY  +I   C   R
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------N 312
           +++A  L D +  KG +P+ V Y  ++   CK  ++ E   ++EKM++ +          
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572

Query: 313 LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L H     G+++EA  L  +M ++G  P V T T +++   + G+ D A    QQM   G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            KP+  +YT F+   C  G+ L+A +M+    E   +P+  TYS ++ G    G+ + A 
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLC--REGKMDGAK----------------KFMQECL 471
           DV++ M   G  P+      LI+ L   + GK  G++                + +++ +
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDL------------------------------------ 495
                 N  ++  LI G C+ G+L                                    
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKH 812

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            EA  ++DDM      P   +   +I  L K G  E  T +   +L  G     + ++ +
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKII 872

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIE 590
           I    + G VE   +L   M  K  C+ +   Y+ +IE
Sbjct: 873 IDGVGKQGLVEAFYELFNVM-EKNGCKFSSQTYSLLIE 909



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/323 (21%), Positives = 145/323 (44%), Gaps = 6/323 (1%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M + G++      + L+    + G   +A      M  +   P+     T I       +
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L  A   + +M+  G++P++ TY+ LIKGY DL +   A  ++  M   GC P + ++ +
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++ +L + K  K+ +    ++   SN+       +   EL+ +M +    P+  +Y  ++
Sbjct: 713 LIKHLLEMKYGKQ-KGSEPELCAMSNMM----EFDTVVELLEKMVEHSVTPNAKSYEKLI 767

Query: 347 NGFCRVGELDQAKKMLQQMY-HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
            G C VG L  A+K+   M  + G  P+ + + A L+  C   K  EA ++++       
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P   +  V++ GL ++G+      V + +++ G++   +   ++I  + ++G ++   +
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887

Query: 466 FMQECLNKGCAVNVVNFTSLIRG 488
                   GC  +   ++ LI G
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLIEG 910


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 261/509 (51%), Gaps = 22/509 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++ L K      A  +L  M  RG+      F+ +M    +AGK   A  +L
Sbjct: 9   DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 68

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           ++M +    P+    NT I  L     + +A   ++    +G  P+V+TY+ L  G C  
Sbjct: 69  AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKR 128

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD--- 316
            RI +A +L+ EM   GC+P+ V+Y T++  LCK  + ++  +L+E +V+ S    D   
Sbjct: 129 GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVS-SGFVPDVVT 187

Query: 317 ----------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                     +GR+++A ++V  M + GC P V+TYTA++ G CR G +D+A  + ++M 
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
              C  + ++Y + +NG C + ++ EA+++++       TP    Y+ +M G  +EG+L 
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR---GTPYIDVYNALMDGYCKEGRLD 304

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           E  +V  +M  +G  P     N+++  LC+ GK+D A  F++   + GC  +VV++  +I
Sbjct: 305 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 364

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G  +    +EA  +LD M      PD VTY T++    K  R ++A  ++  M+  G+ 
Sbjct: 365 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVD 424

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR----TAYNQVIENLCSFGYLEEAG 602
           P  VTY T+I    Q  R+ D  +L+ +ML +  C     T YN +I+ LC  G L++A 
Sbjct: 425 PDNVTYNTLISGLSQTNRLGDAYELMHEML-RNGCVVSACTTYNTIIDRLCKEGCLKQAL 483

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKG 631
            ++  +     +A+  T ++ ++    +G
Sbjct: 484 LLMDHMTGHGVEANTVTYNIFIDRLCKEG 512



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 161/590 (27%), Positives = 287/590 (48%), Gaps = 51/590 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y ++ + L K      A  +++ M+  G  C P   +Y  L+    +A K   A  
Sbjct: 114 DVVTYSILADGLCKRGRIDEAFELVKEMSGNG--CTPNLVTYNTLIDGLCKASKTEKAYE 171

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  +  +   P+++     +  L    +L KAL+ +E M   G TP+V+TY  L++G C
Sbjct: 172 LLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLC 231

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSN 312
              R+ +A  +  EM  K C+ D ++Y +++   CK  R KE + +++ +     ++  N
Sbjct: 232 RTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYN 291

Query: 313 LFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
              D    +GR++E   +   M+  GC+P++ TY  V++G C+ G++D+A   L+ M+  
Sbjct: 292 ALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSA 351

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           GC P+ VSY   ++GL    K  EAR++++   +    P+A+TY+ +M    +E +  +A
Sbjct: 352 GCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDA 411

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV-VNFTSLIR 487
             +++ M+K G  P  V  N LI  L +  ++  A + M E L  GC V+    + ++I 
Sbjct: 412 VGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIID 471

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS----- 542
             C++G L++AL L+D M     + +TVTY   ID L K GR++EA+ L+ +M +     
Sbjct: 472 RLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEV 531

Query: 543 ----------------------------KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
                                       KGL  T  T+  +I  + +  R+++ L LLE 
Sbjct: 532 SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLEL 591

Query: 575 MLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M+ +        YN VI  LC    +++A ++  ++      A + +  VL+     +G 
Sbjct: 592 MVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGR 651

Query: 633 PLLAYKVACRMFNRNL-IPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
              A +V   M + +  I DLK C+K+   L  +G+ EEA  L+ R   +
Sbjct: 652 GKEALQVLEEMASSDCEIDDLK-CRKLYLALRGQGRGEEAAELLRRMTTK 700



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 222/428 (51%), Gaps = 28/428 (6%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  VAP++   N  I  L   +K  KA   L  M   G+TP+ +T+N ++ G C   +
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            + A  L+  M  + C P   +Y T++  LCK                       Q  ++
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCK-----------------------QQNVD 97

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            AK LV++    G +PDVVTY+ + +G C+ G +D+A +++++M  +GC PN V+Y   +
Sbjct: 98  RAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLI 157

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +GLC   K+ +A E++ T     + P+ +TY++++ GL +EG+L +A  +V  M+K+G  
Sbjct: 158 DGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCT 217

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P+ +    L++ LCR G++D A    +E ++K C  + + + SL+ G+C+    +EA  +
Sbjct: 218 PSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKV 277

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           +D +   +  P    Y  ++D   K GR++E   +   M  +G VP + TY  V+   C+
Sbjct: 278 VDGI---RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK 334

Query: 562 VGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G+V++    LE M S        +YN +I+ L      +EA ++L ++++     DA T
Sbjct: 335 HGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVT 394

Query: 620 CHVLVESY 627
            + L+  +
Sbjct: 395 YNTLMAQF 402



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 205/416 (49%), Gaps = 36/416 (8%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + P+V TYN LI G C   +   A +++ EM  +G +PD V++ ++M  LCK        
Sbjct: 6   VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCK-------- 57

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                           G+ E A  L+  M++  C P   TY  +++G C+   +D+AK +
Sbjct: 58  ---------------AGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTL 102

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           + +    G  P+ V+Y+   +GLC  G+  EA E++        TPN +TY+ ++ GL +
Sbjct: 103 VDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCK 162

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
             K  +A +++  +V  GF P  V   +++  LC+EG++D A K ++  L +GC  +V+ 
Sbjct: 163 ASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVIT 222

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +T+L+ G C+ G ++EA  +  +M       D + Y ++++   K+ R +EA +++  + 
Sbjct: 223 YTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR 282

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR------TAYNQVIENLCSF 595
                P +  Y  ++  YC+ GR++++  + E M     CR        YN V++ LC  
Sbjct: 283 G---TPYIDVYNALMDGYCKEGRLDEIPNVFEDM----ACRGCVPNIKTYNIVMDGLCKH 335

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           G ++EA   L  +       D  + +++++       P  A +V  +M    + PD
Sbjct: 336 GKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPD 391



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 189/361 (52%), Gaps = 19/361 (5%)

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M++    PDV TY  +++G C+  + D+A +ML +M   G  P+TV++ + ++GLC  GK
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
              A  ++    E    P+  TY+ ++ GL ++  +  A  +V E V  GF P  V  ++
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L   LC+ G++D A + ++E    GC  N+V + +LI G C+    E+A  LL+ +    
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             PD VTYT I+D L K GR+++A +++  ML +G  P+V+TY  ++   C+ GRV++  
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 570 KLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            + ++M+SK  C     AY  ++   C     +EA K++  + R     D    + L++ 
Sbjct: 241 HIFKEMVSKD-CTADALAYVSLVNGYCKSSRTKEAQKVVDGI-RGTPYIDVY--NALMDG 296

Query: 627 YLNKG----IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           Y  +G    IP +   +AC    R  +P++K    V + L   GK +EA      F+E  
Sbjct: 297 YCKEGRLDEIPNVFEDMAC----RGCVPNIKTYNIVMDGLCKHGKVDEA----FPFLESM 348

Query: 683 H 683
           H
Sbjct: 349 H 349



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 196/375 (52%), Gaps = 12/375 (3%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           + ++A E++++M   G  PD VT+ ++++G C+ G+ ++A  +L  M    C+P+  +Y 
Sbjct: 25  KTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYN 84

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++GLC       A+ +++      + P+ +TYS++  GL + G++ EA ++V+EM   
Sbjct: 85  TLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGN 144

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  V  N LI  LC+  K + A + ++  ++ G   +VV +T ++ G C++G L++A
Sbjct: 145 GCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKA 204

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L +++ M      P  +TYT +++ L + GRV+EA  +  +M+SK      + Y ++++ 
Sbjct: 205 LKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNG 264

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           YC+  R ++  K+++ +         YN +++  C  G L+E   +   +       +  
Sbjct: 265 YCKSSRTKEAQKVVDGIRGTPYI-DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIK 323

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG-----KSEEADT 673
           T +++++     G    A+     M +   +PD+     VS  +I++G     K +EA  
Sbjct: 324 TYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV-----VSYNIIIDGLFKASKPKEARQ 378

Query: 674 LMLRFVERGHIQPKS 688
           ++ + ++ G I P +
Sbjct: 379 VLDQMIQAG-IPPDA 392



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 87/179 (48%), Gaps = 4/179 (2%)

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
           K  PD  TY  +ID L K  + ++A+E++ +M+ +G+ P  VT+ +++   C+ G+ E  
Sbjct: 5   KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 64

Query: 569 LKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
             LL  M +++ CR +   YN +I  LC    ++ A  ++ + + +    D  T  +L +
Sbjct: 65  HSLLAVM-AERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILAD 123

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
               +G    A+++   M      P+L     + + L    K+E+A  L+   V  G +
Sbjct: 124 GLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 253/492 (51%), Gaps = 19/492 (3%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  M+    +    + A+R++      G+   P+ F++  L+ A    G++ +A+ V 
Sbjct: 220 VTYNTMVNGYCRAGRIEDARRLIN-----GMPFPPDTFTFNPLIRALCVRGRIPDALAVF 274

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M     +P+++  +  +      +   +A+  L+ M+  G  P+++TYN LI   C+ 
Sbjct: 275 DDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNE 334

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
             + +A+ ++  +P  GC PD V+Y  V+  LC  +R KEV +L+ +M +     D   F
Sbjct: 335 GDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTF 394

Query: 315 H-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +        QG ++ A E+V+ MS+ GC+ D+VTY+++++G C VG +D A ++L ++  
Sbjct: 395 NTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKS 454

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +GCKP+T++YT  L GLC   +   A E++         P+ +T++ V+  L ++G +  
Sbjct: 455 YGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDR 514

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  VV +M + G  P  V  N +I  LC E  +D A + + +  + GC  ++V F +L++
Sbjct: 515 AIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLK 574

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C     E+A  L+ +M      PD +T+ T+I +L + G + +A E +  M   G VP
Sbjct: 575 GLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVP 634

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGK 607
              TY  V+    + G+ +  L+LL  M +       YN VI NL   G +EEA  +L  
Sbjct: 635 NSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRV 694

Query: 608 VLRTASKADAST 619
           ++      D +T
Sbjct: 695 MVSNGLCPDTTT 706



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 245/521 (47%), Gaps = 32/521 (6%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           R+ A  G       ++ ++  Y RAG++ +A  +++ M      P+    N  I  L V 
Sbjct: 208 RVFAALGPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVR 264

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            ++  AL   + M   G +P+V+TY+ L+   C     + A+ L+DEM  KGC PD V+Y
Sbjct: 265 GRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTY 324

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
             ++  +C E                       G ++EA  +++ +   GC PD VTYT 
Sbjct: 325 NVLINAMCNE-----------------------GDVDEALNILSNLPSHGCKPDAVTYTP 361

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           V+   C      + +++L +M  + C P+ V++   +  LC  G    A E+++   E  
Sbjct: 362 VLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHG 421

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
              + +TYS ++ GL   G++ +A +++  +   G  P  +    +++ LC   + + A+
Sbjct: 422 CVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAE 481

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           + M E L   C  + V F +++   CQKG ++ A+ +++ M      PD VTY  IID L
Sbjct: 482 ELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGL 541

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT- 583
                +++A EL+  + S G  P +VT+ T++   C V R ED  +L+  M+ +  C   
Sbjct: 542 CNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMM-RSNCPPD 600

Query: 584 --AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              +N VI +LC  G L +A + L  +       ++ST  ++V++ L  G    A ++  
Sbjct: 601 ELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLS 660

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            M N    PDL     V   L   GK EEA  L+   V  G
Sbjct: 661 GMTNGT--PDLITYNTVISNLTKAGKMEEALDLLRVMVSNG 699



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 254/532 (47%), Gaps = 45/532 (8%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRA-GKLRNAMYVLSMMQKAAVAPNLLICNT 216
           +GAKR LR + +RG     E    L++  S A G  RN              P ++ CN 
Sbjct: 151 EGAKRRLRSLVQRG-----EIDEALVLFDSMASGGGRNC-------------PPVVPCNI 192

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            I  L    +++ A R    +   G +  V+TYN ++ GYC   RI+DA +LI+ MP   
Sbjct: 193 LIKRLCSDGRVSDAERVFAAL---GPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFP- 248

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMVNDSNLFHD--------QGRIEEAK 324
             PD  ++  ++  LC   RI +      D++ +  + S + +         +    +A 
Sbjct: 249 --PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAM 306

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L+++M   GC PD+VTY  ++N  C  G++D+A  +L  +  HGCKP+ V+YT  L  L
Sbjct: 307 ALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSL 366

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C + +  E  E++         P+ +T++ ++  L ++G +  A +VV  M + G     
Sbjct: 367 CGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADI 426

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  + ++  LC  G++D A + +    + GC  + + +T++++G C     E A  L+ +
Sbjct: 427 VTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAE 486

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      PD VT+ T++ +L + G V+ A  ++ +M   G  P +VTY  +I   C    
Sbjct: 487 MLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESC 546

Query: 565 VEDLLKLLEKMLSKQKCR-----TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
           ++D ++LL  +   Q C        +N +++ LC     E+A +++  ++R+    D  T
Sbjct: 547 IDDAMELLSDL---QSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELT 603

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
            + ++ S   KG+   A +    M     +P+      V + L+  GK++ A
Sbjct: 604 FNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAA 655



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 242/499 (48%), Gaps = 35/499 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG--KLRNAMY 197
           D + Y +++  +        A  +L  +   G  C+P+A +Y  V  S  G  + +    
Sbjct: 320 DIVTYNVLINAMCNEGDVDEALNILSNLPSHG--CKPDAVTYTPVLKSLCGSERWKEVEE 377

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L+ M     AP+ +  NT +  L     + +A+  ++ M   G   +++TY+ ++ G C
Sbjct: 378 LLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLC 437

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
           D+ R+ DA++L+  +   GC PD ++Y TV+  LC  +                      
Sbjct: 438 DVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTE---------------------- 475

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            + E A+EL+ +M    C PD VT+  VV   C+ G +D+A ++++QM  +GC P+ V+Y
Sbjct: 476 -QWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTY 534

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              ++GLC+     +A E+++  +     P+ +T++ ++ GL    +  +A  ++  M++
Sbjct: 535 NCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMR 594

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
               P  +  N +I SLC++G +  A + ++     GC  N   ++ ++    + G  + 
Sbjct: 595 SNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQA 654

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           AL LL  M      PD +TY T+I  L+K G++EEA +L+  M+S GL P   TYR++ +
Sbjct: 655 ALELLSGMT--NGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAY 712

Query: 558 RYCQVGRVEDLLKLLEKM----LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
             C+    +  +++L ++    LS     T YN V+   C     + A      ++ +  
Sbjct: 713 GVCREDGTDRAVRMLRRVQDTGLSPDT--TFYNDVLLGFCRDRRTDLAIDCFAHMVSSGC 770

Query: 614 KADASTCHVLVESYLNKGI 632
             D ST  +L+E+    G+
Sbjct: 771 MPDESTYVILLEALAYGGL 789



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 197/409 (48%), Gaps = 29/409 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + Y  +L+ L        A  +L  +   G  C+P+  +Y  V        +   A  
Sbjct: 425 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYG--CKPDTIAYTTVLKGLCSTEQWERAEE 482

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +++ M  +   P+ +  NT +  L     + +A+R +E+M   G +P+++TYNC+I G C
Sbjct: 483 LMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLC 542

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
           +   I DA++L+ ++   GC PD V++ T++  LC   R                     
Sbjct: 543 NESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRW-------------------- 582

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
              E+A++L+  M +  C PD +T+  V+   C+ G L QA + L+ M  +GC PN+ +Y
Sbjct: 583 ---EDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTY 639

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +  ++ L   GK+  A E+++       TP+ ITY+ V+  L + GK+ EA D++R MV 
Sbjct: 640 SIVVDALLKAGKAQAALELLSGMTN--GTPDLITYNTVISNLTKAGKMEEALDLLRVMVS 697

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G  P       L   +CRE   D A + ++   + G + +   +  ++ GFC+    + 
Sbjct: 698 NGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDL 757

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           A+     M      PD  TY  +++AL+  G ++EA  L+  + S G++
Sbjct: 758 AIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVL 806


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 268/541 (49%), Gaps = 49/541 (9%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y ++L  L++      A  + R M R  +      F     A  R G+  +A+ +L  M 
Sbjct: 145 YNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMA 204

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           +    P+ ++  T IH LV    +A+A   L+ M L G   +V T+N L+ G C L R++
Sbjct: 205 RHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVR 264

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK----------RIKEVRDLMEKMVNDSNL 313
           +A +L+D M  +GC P  V+Y  ++  LC+ +          R+ EV  +M   V    L
Sbjct: 265 EAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCL 324

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
              +G++  A EL   M   GC PDV TY+ +++G C++G    A +ML +M   GC PN
Sbjct: 325 --TEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPN 382

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            V+Y+  L+  C NG   +AR M++    + ++ N+  Y+ +++ L ++GKL +A  +V+
Sbjct: 383 IVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQ 442

Query: 434 EM-----------------------------------VKKGFFPTPVEINLLIQSLCREG 458
           EM                                   +++G     +  N LI +L R G
Sbjct: 443 EMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNG 502

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           +     +   E L  GC ++V+++  LI+  C++G+++ +++LL++M      P+  +Y 
Sbjct: 503 RWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYN 562

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            +I+ L K G+V +A EL  +ML++GL P +VTY T+I+  C+VG     L LLEK+ ++
Sbjct: 563 MLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNE 622

Query: 579 --QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
                   YN +I   C    L++A  +L K +      +  T  ++V++++ + + L  
Sbjct: 623 NVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQTVNLEG 682

Query: 637 Y 637
           Y
Sbjct: 683 Y 683



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 210/440 (47%), Gaps = 22/440 (5%)

Query: 265 AIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND------------S 311
           A+ L+D+MP +   SP   SY  V+  L +     +   L  +M+ D            +
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 GR  +A  L+  M++ GC+PD V Y  V++     G + +A  +L +M   GC 
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            +  ++   + GLC  G+  EA  +++    +   P+ +TY  ++ GL R  +  EAC +
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           +  + +       V +N +I+    EGK+  A +  +   +KGC  +V  ++ L+ G C+
Sbjct: 305 LGRLPEVNV----VMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCK 360

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G    A+ +LD+M      P+ VTY+T++ +  +NG  ++A  ++ +ML+KG       
Sbjct: 361 LGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQG 420

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKV 608
           Y  +I+  C+ G+++   +L+++M S Q C+     YN +I +LC+   +EEA  I   +
Sbjct: 421 YNGIIYALCKDGKLDQATRLVQEMKS-QGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL 479

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
           +     A+  T + L+ + L  G      ++A  M       D+     + + L  EG  
Sbjct: 480 IEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNV 539

Query: 669 EEADTLMLRFVERGHIQPKS 688
           + +  L+   V +G I+P +
Sbjct: 540 DRSMALLEEMVTKG-IKPNN 558


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 264/534 (49%), Gaps = 31/534 (5%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A++V R M   G+     +++ L+  +  AG L   +     M++    PN++  NT I 
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                 ++ +A + L  M L G+ PN+LTYN +I G C + RI++   ++ EM  KG +P
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
           D V+Y T++   CK     +   L  +M+ +             N     G +  A E  
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           +QM   G  P+ VTYT+++NGF + G +D+A ++  +M   G  P  V+Y A LNG C +
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G+  EA  ++   E +  +P+ ++YS ++ G  R  +L  A  +  EMV+KG  P  +  
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITY 486

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           + LIQ LC + +++ A    QE LNK    +   +TSLI G+C++GDL EAL+L D+M  
Sbjct: 487 SSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIK 546

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PDTVTY  +I+ L+K  R  EA  L++K+     +P  +TY T+I   C     + 
Sbjct: 547 KGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIES-CSDIEFKS 605

Query: 568 LLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           ++ L                 I+  C  G + EA ++   +++   K + +  +V++  +
Sbjct: 606 VVAL-----------------IKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGH 648

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
              G    A+K+   M +   IP       + + L  EG  E+ + L++R + R
Sbjct: 649 CRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLN-LVIRDILR 701



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 158/549 (28%), Positives = 274/549 (49%), Gaps = 41/549 (7%)

Query: 114 VLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIE 173
           +L++Q D  + L+F  +A     +  +P    + L IL+K KL + A+ + + +A   ++
Sbjct: 54  LLQTQNDRTLTLKFINFAKPHQFF--NPHCKCIALHILTKFKLYKTAQNLAQDLAENSVD 111

Query: 174 CRPEAF------SYLMVAYSRA------------GKLRNAMYVLSMMQKAAVAPNLLICN 215
            +   F      +Y M   S A              +  A+ ++ + +     P +L  N
Sbjct: 112 EKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYN 171

Query: 216 TAIHVLVVGNKLAKALRFLER----MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
             +  +V   +  K + F E+    M  +G++ NV +YN LI+G+C    ++  ++  +E
Sbjct: 172 AILDSIV---RCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEE 228

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFHDQ---------GR 319
           M    C P+ V+Y TV+G  CK KRI E   L+  M  +    NL             GR
Sbjct: 229 MERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGR 288

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           IEE   ++ +M + G  PD VTY  +VNG+C+VG   QA  +  +M  +G  P+ V+YT+
Sbjct: 289 IEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTS 348

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +N +C  G    A E  +        PN +TY+ +++G  ++G + EA  +  EM++ G
Sbjct: 349 LINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSG 408

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           F PT V  N L+   C  G+M+ A   ++    KG + +VV+++++I GFC+  +L+ A 
Sbjct: 409 FPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAF 468

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +  +M      PD +TY+++I  L +  R+ EA +L  +ML+K L+P   TY ++I+ Y
Sbjct: 469 QMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGY 528

Query: 560 CQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C+ G + + L L ++M+ K        YN +I  L       EA ++L K+    S  + 
Sbjct: 529 CKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNG 588

Query: 618 STCHVLVES 626
            T   L+ES
Sbjct: 589 ITYDTLIES 597



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 236/505 (46%), Gaps = 36/505 (7%)

Query: 109 RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA 168
           R  CA      +  + L+FF   +R  R   + + Y  ++    K K    A ++LR M 
Sbjct: 211 RGFCAA----GNLEMGLRFFEEMERN-RCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMG 265

Query: 169 RRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
             G+E  P   +Y MV     R G++     VL+ M +   AP+ +  NT ++       
Sbjct: 266 LEGLE--PNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGN 323

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
             +AL     M   G+ P+V+TY  LI   C    +  A++  D+M ++G  P+ V+Y +
Sbjct: 324 FHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTS 383

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMG 334
           ++    ++  + E   + ++M+               N     GR+EEA  L+  M   G
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             PDVV+Y+ ++ GFCR  ELD+A +M  +M   G  P+ ++Y++ + GLC   +  EA 
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEAC 503

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           ++      +   P+  TY+ +++G  +EG L+EA ++  EM+KKGF P  V  N+LI  L
Sbjct: 504 DLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGL 563

Query: 455 CREGKMDGAKK-----FMQECLNKGCAVNVV----------NFTSLIRGFCQKGDLEEAL 499
            ++ +   AK+     F  E +  G   + +          +  +LI+GFC KG + EA 
Sbjct: 564 NKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEAD 623

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            + + M    + P+   Y  II    ++G V +A +L  +M+  G +P  VT   ++   
Sbjct: 624 QVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKAL 683

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRTA 584
              G  E L  ++  +L   K   A
Sbjct: 684 YSEGMDEQLNLVIRDILRSCKLSDA 708



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 228/504 (45%), Gaps = 37/504 (7%)

Query: 77  LVREVCRLIELRSAW----SPKLEGELRNLLR-SLKPRQICAVLRSQADERVALQFFYWA 131
           ++   C+L  +  A+    S  LEG   NLL  ++    +C V R +    V  +     
Sbjct: 244 VIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEM---- 299

Query: 132 DRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGK 191
           DR+  +  D + Y  ++    K      A  +   M R G+      ++ L+    +AG 
Sbjct: 300 DRKG-FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGN 358

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           L  AM     M    + PN +   + I+       + +A R  + M  +G  P ++TYN 
Sbjct: 359 LNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNA 418

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND- 310
           L+ G+C   R+++AI L+  M  KG SPD VSY T++   C+ + +     +  +MV   
Sbjct: 419 LLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKG 478

Query: 311 --------SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                   S+L     +Q R+ EA +L  +M     +PD  TYT+++NG+C+ G+L++A 
Sbjct: 479 VSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEAL 538

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY------- 412
            +  +M   G  P+TV+Y   +NGL    ++ EA+ ++     +   PN ITY       
Sbjct: 539 NLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESC 598

Query: 413 ------SVV--MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
                 SVV  + G   +G ++EA  V   M+K+   P     N++I   CR+G +  A 
Sbjct: 599 SDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAH 658

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           K  +E ++ G   + V   +L++    +G  E+   ++ D+    K  D      ++   
Sbjct: 659 KLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQIN 718

Query: 525 SKNGRVEEATELMMKMLSKGLVPT 548
            K G ++    L+ +M   G +P+
Sbjct: 719 HKEGNIDAVFNLLTEMAKDGFLPS 742


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/512 (30%), Positives = 256/512 (50%), Gaps = 38/512 (7%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G+L      L  M      P+++ C + I  L    K  KA R +E ++ +G  P+V+
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN LI GYC    I  A++L+D M +   SPD V+Y T++  LC               
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTLC--------------- 223

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                   D G+++EA E++++  Q  C PDV+TYT ++   C+   + QA K+L +M  
Sbjct: 224 --------DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRD 275

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GCKP+ V+Y   +NG+C  G+  EA   +N        PN IT+++++  +   G+  +
Sbjct: 276 KGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMD 335

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A   + EM++KG  P+ V  N+LI  LCR+G +  A   +++    GC  N +++  L+ 
Sbjct: 336 AEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLH 395

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
             C+   +E A+  LD M      PD VTY T++ AL K+G+V+ A E++ ++ SKG  P
Sbjct: 396 ALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSP 455

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            ++TY TVI    +VG+ +D +KLL++M  K  +     Y+ ++  L   G ++EA    
Sbjct: 456 VLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFF 515

Query: 606 GKVLRTASKADASTCHVLVESYLN-----KGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
             +     K +A T + ++          + I  LAY VA     R   P       + E
Sbjct: 516 HDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVA-----RGCKPTETSYMILIE 570

Query: 661 RLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
            L  EG ++EA  L+     RG ++  S E +
Sbjct: 571 GLAYEGLAKEALELLNELCSRGVVKKSSAEQV 602



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 221/439 (50%), Gaps = 26/439 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y +++    KT     A   L+L+ R  +      ++ ++     +GKL+ AM VL
Sbjct: 179 DVITYNVLISGYCKTGEIGSA---LQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVL 235

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
               +    P+++     I      + + +A++ L+ M+  G  P+V+TYN LI G C  
Sbjct: 236 DRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKE 295

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R+ +AI+ ++ MP  GC P+ +++  ++  +C                         GR
Sbjct: 296 GRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCS-----------------------TGR 332

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
             +A++ + +M + GC P VVT+  ++N  CR G + +A  +L++M  HGC PN++SY  
Sbjct: 333 WMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNP 392

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L+ LC + K   A E ++        P+ +TY+ ++  L ++GK+  A +++ ++  KG
Sbjct: 393 LLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKG 452

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  +  N +I  L + GK D A K + E   KG   +++ +++L+ G  ++G ++EA+
Sbjct: 453 CSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAI 512

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
           +   D+      P+ +TY +I+  L K  +   A + +  M+++G  PT  +Y  +I   
Sbjct: 513 AFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGL 572

Query: 560 CQVGRVEDLLKLLEKMLSK 578
              G  ++ L+LL ++ S+
Sbjct: 573 AYEGLAKEALELLNELCSR 591



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 121/237 (51%), Gaps = 7/237 (2%)

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L R G+L E    + +MV +G  P  +    LI+ LC+ GK   A + M+   + G   +
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           V+ +  LI G+C+ G++  AL LLD M +    PD VTY TI+  L  +G+++EA E++ 
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSF 595
           + + +   P V+TY  +I   C+   V   +KLL++M  K  C+     YN +I  +C  
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDK-GCKPDVVTYNVLINGICKE 295

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           G L+EA + L  +     + +  T ++++ S  + G  + A K    M  +   P +
Sbjct: 296 GRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSV 352



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 4/207 (1%)

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKD-PDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +R   + G+LEE    L+DM +C+ D PD +  T++I  L K G+  +AT +M  +   G
Sbjct: 117 LRRLVRNGELEEGFKFLEDM-VCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSG 175

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKI 604
            VP V+TY  +I  YC+ G +   L+LL++M       T YN ++  LC  G L+EA ++
Sbjct: 176 AVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVT-YNTILRTLCDSGKLKEAMEV 234

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
           L + ++     D  T  +L+E+   +     A K+   M ++   PD+     +   +  
Sbjct: 235 LDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICK 294

Query: 665 EGKSEEADTLMLRFVERGHIQPKSEEH 691
           EG+ +EA   +      G  QP    H
Sbjct: 295 EGRLDEAIRFLNHMPSYG-CQPNVITH 320



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 66/135 (48%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  +++ LSK      A ++L  M  +G++     +S L+   SR GK+  A+     
Sbjct: 458 ITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHD 517

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           +++  V PN +  N+ +  L    +  +A+ FL  M   G  P   +Y  LI+G      
Sbjct: 518 LEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGL 577

Query: 262 IKDAIKLIDEMPLKG 276
            K+A++L++E+  +G
Sbjct: 578 AKEALELLNELCSRG 592


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 161/589 (27%), Positives = 276/589 (46%), Gaps = 44/589 (7%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYW---ADRQWRYRH---------------D 140
           +RNL R  +      VLR+       +  F +        RY H               D
Sbjct: 83  IRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVAPD 142

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYV 198
              Y  ++ +L        A  +L  M RRG  C+P   +Y  L+ A  R      AM V
Sbjct: 143 AYTYTPLIRVLCDRGRVADALSLLDDMLRRG--CQPNVVTYTVLLEAMCRNSGFEQAMAV 200

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L  M+     PN++  N  I+ +    ++  A   L R+   G  P+ ++Y  L+KG C 
Sbjct: 201 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCA 260

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
             R  D  +L  EM  K C P++V++  ++ + C+   ++    ++E+M           
Sbjct: 261 SKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTL 320

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                N    QGR+++A +L+N M   GC PD ++YT V+ G CR    D AK++L +M 
Sbjct: 321 CNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMV 380

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
            + C PN V++  F+  LC  G   +A  +I    E   T   +TY+ +++G   +G + 
Sbjct: 381 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHID 440

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
            A ++ R M  K   P  +    L+  LC   ++DGA + + E L   C  NVV F  L+
Sbjct: 441 SALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLV 497

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
             FCQKG LEEA+ L++ M      P+ +TY T++D ++K+   E+A EL+  ++SKG+ 
Sbjct: 498 SFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVS 557

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKI 604
           P V+T+ ++I    +  R+E+ ++L   +  +  +     YN+++  LC    ++ A   
Sbjct: 558 PDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDF 617

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGI-----PLLAYKVACRMFNRNL 648
              ++      + ST  +L+E   ++G+      LL+   +  + N+NL
Sbjct: 618 FAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLNKNL 666



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 241/510 (47%), Gaps = 62/510 (12%)

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
           AP++ +C   I  L    + + A R L   + +G   +V  YN L+ GYC    +  A +
Sbjct: 73  APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 132

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELV 327
           LI  MP+   +PD  +Y  ++  LC                       D+GR+ +A  L+
Sbjct: 133 LIGSMPV---APDAYTYTPLIRVLC-----------------------DRGRVADALSLL 166

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           + M + GC P+VVTYT ++   CR    +QA  +L +M   GC PN V+Y   +NG+C  
Sbjct: 167 DDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE 226

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G+  +ARE++N      + P+ ++Y+ ++ GL    +  +  ++  EM++K   P  V  
Sbjct: 227 GRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTF 286

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           ++LI+  CR G ++ A + +++    GCA N      +I   C++G +++A  LL+DM  
Sbjct: 287 DMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGS 346

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
              +PDT++YTT++  L +  R ++A EL+ +M+     P  VT+ T I   CQ G +E 
Sbjct: 347 YGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQ 406

Query: 568 LLKLLEKMLSKQKCRTA---YNQVIENLCSFGY--------------------------- 597
            + L+E+M S+  C      YN ++   C  G+                           
Sbjct: 407 AIMLIEQM-SEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGL 465

Query: 598 -----LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
                L+ A +++ ++LR     +  T +VLV  +  KG    A ++  +M      P+L
Sbjct: 466 CNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNL 525

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
                + + +  +  SE+A  L+   V +G
Sbjct: 526 ITYNTLLDGITKDCSSEDALELLHGLVSKG 555


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 177/624 (28%), Positives = 300/624 (48%), Gaps = 27/624 (4%)

Query: 86  ELRSAWSPKLEG-ELRNLLRS---LKPRQICAVLRSQADERVALQFFYWADRQWRYRHDP 141
           E  + W   LE  +L  L +S   + P Q+C +L    D    L+ F     Q  Y H  
Sbjct: 53  EPATEWESLLEPFDLTKLRKSRILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTF 112

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
            VYY+ +  L      +   ++L  M   GI  R   F  +M  Y +AG+   A+ +L  
Sbjct: 113 DVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLD 172

Query: 202 MQKAAVA-PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           M+   +  P     +  + +LV GN    A      M   G++P V T+  ++K  C  +
Sbjct: 173 MRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFN 232

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFH 315
            +  A  L+ +M   GC P+ + Y T++  L ++ ++ E   L+E+M     + D   F+
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFN 292

Query: 316 D-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
           D         +I +A +LV++M   G  PD +TY  +++G CR+G+L++A+K+L ++   
Sbjct: 293 DVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI--- 349

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW-WTPNAITYSVVMHGLRREGKLSE 427
            C PN       +NG   +G+  EA+  +N +   + + P+  TY+++MHGL +EG LS 
Sbjct: 350 PC-PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSF 408

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A D+V EM ++G  P  +   +L+  LC+ G ++ A   + E   +G  +N V +  LI 
Sbjct: 409 ARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLIC 468

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
             C+K  +  AL+LL +M      PD  TY ++I  L K  R++EA  L   ML  G V 
Sbjct: 469 ALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVA 528

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKI 604
             VTY T+IH   + G  +  L L+  ML +  C   +  YN +I+  C  G +E+  ++
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFR-GCTLDKITYNGLIKAFCKVGNIEKGLEL 587

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
             +++     AD  +C++++      G    A++      NR  +PD+     V   L  
Sbjct: 588 YEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCK 647

Query: 665 EGKSEEADTLMLRFVERGHIQPKS 688
            G+ +EA  L  R    G ++P +
Sbjct: 648 VGRIKEALNLFDRLQVEG-VRPDA 670



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/516 (28%), Positives = 261/516 (50%), Gaps = 15/516 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y ++LEIL      Q A  V   M  +G+      F  +M A     ++ +A  +L  M 
Sbjct: 186 YDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMT 245

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           K    PN ++  T IH L   N++++AL+ LE M + G  P+V T+N +I G C +++I 
Sbjct: 246 KHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIH 305

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------- 316
           DA KL+D M L+G  PD ++Y  ++  LC+  ++ E R ++ K+   +N   +       
Sbjct: 306 DATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYV 365

Query: 317 -QGRIEEAKELVNQ-MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             G+++EA+  +N+ M   G  PD+ TY  +++G C+ G L  A+ ++ +M   GC+PN 
Sbjct: 366 MSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNV 425

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           ++Y   +NGLC  G   EA  +++       T N++ Y+ ++  L R+ K+  A +++ E
Sbjct: 426 ITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSE 485

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M  KG  P     N LI  LC+  ++D A +     L  G   N V + +LI    ++G 
Sbjct: 486 MCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGA 545

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
            ++AL+L++DM       D +TY  +I A  K G +E+  EL  +M+  GL    ++   
Sbjct: 546 FQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNI 605

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I+  C+VG+V++  + L   +++        YN V+  LC  G ++EA  +  ++    
Sbjct: 606 MINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEG 665

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
            + DA T +  +     +G+       AC  F R +
Sbjct: 666 VRPDAFTYNTFISWQCKEGM----VNDACSFFYRGI 697



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 218/438 (49%), Gaps = 17/438 (3%)

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           L K      A +++  M  RG       + +L+    R GKL  A  +L  +      PN
Sbjct: 298 LCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPN 353

Query: 211 LLICNTAIHVLVVGNKLAKALRFL-ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
             I NT I+  V+  +L +A  FL E M   G  P++ TYN L+ G C    +  A  L+
Sbjct: 354 NAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV 413

Query: 270 DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFHD--------Q 317
           +EM  +GC P+ ++Y  ++  LCK   ++E   ++ +M    +  +++ ++        +
Sbjct: 414 NEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRK 473

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            ++  A  L+++M   GC PD+ TY +++ G C+V  +D+A ++   M   G   N V+Y
Sbjct: 474 EKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTY 533

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              ++ L   G   +A  ++N       T + ITY+ ++    + G + +  ++  +M+ 
Sbjct: 534 NTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIM 593

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G     +  N++I  LC+ GK+D A +F+++ +N+G   ++V + S++ G C+ G ++E
Sbjct: 594 DGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKE 653

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           AL+L D + +    PD  TY T I    K G V +A     + +  G VP+ +T+  +++
Sbjct: 654 ALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVY 713

Query: 558 RYCQVGRVEDLLKLLEKM 575
              +    E+   +L+++
Sbjct: 714 TLLKQSNQENNFFVLDEL 731



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 168/346 (48%), Gaps = 14/346 (4%)

Query: 175 RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           +P+ F+Y  LM    + G L  A  +++ M +    PN++     ++ L     L +A  
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGL 446

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
            L  M   G+T N + YNCLI   C   ++  A+ L+ EM  KGC PD  +Y +++  LC
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLC 506

Query: 293 KEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMGCIPDVV 340
           K  RI E   L   M+ D         + L H    +G  ++A  LVN M   GC  D +
Sbjct: 507 KVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKI 566

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TY  ++  FC+VG +++  ++ +QM   G   +T+S    +NGLC  GK   A E +  +
Sbjct: 567 TYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDA 626

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
               + P+ +TY+ V++GL + G++ EA ++   +  +G  P     N  I   C+EG +
Sbjct: 627 INRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMV 686

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           + A  F    +  G   + + +  L+    ++ + E    +LD+++
Sbjct: 687 NDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW 732



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 154/316 (48%), Gaps = 23/316 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y +++  L K  L + A  VL  M+ RG+      ++ L+ A  R  K+  A+ +LS 
Sbjct: 426 ITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSE 485

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M      P+L   N+ I+ L   +++ +A R    M L G   N +TYN LI        
Sbjct: 486 MCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGA 545

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            + A+ L+++M  +GC+ DK++Y  ++   CK                        G IE
Sbjct: 546 FQKALTLVNDMLFRGCTLDKITYNGLIKAFCK-----------------------VGNIE 582

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +  EL  QM   G   D ++   ++NG C+VG++D A + L+   + G  P+ V+Y + L
Sbjct: 583 KGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVL 642

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           NGLC  G+  EA  + +  + E   P+A TY+  +    +EG +++AC      ++ GF 
Sbjct: 643 NGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFV 702

Query: 442 PTPVEINLLIQSLCRE 457
           P+ +  N+L+ +L ++
Sbjct: 703 PSNLTWNVLVYTLLKQ 718


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 177/624 (28%), Positives = 300/624 (48%), Gaps = 27/624 (4%)

Query: 86  ELRSAWSPKLEG-ELRNLLRS---LKPRQICAVLRSQADERVALQFFYWADRQWRYRHDP 141
           E  + W   LE  +L  L +S   + P Q+C +L    D    L+ F     Q  Y H  
Sbjct: 53  EPATEWESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFERVGGQKGYCHTF 112

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
            VYY+ +  L      +   ++L  M   GI  R   F  +M  Y +AG+   A+ +L  
Sbjct: 113 DVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLD 172

Query: 202 MQKAAVA-PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           M+   +  P     +  + +LV GN    A      M   G++P V T+  ++K  C  +
Sbjct: 173 MRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFN 232

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFH 315
            +  A  L+ +M   GC P+ + Y T++  L ++ ++ E   L+E+M     + D   F+
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFN 292

Query: 316 D-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
           D         +I +A +LV++M   G  PD +TY  +++G CR+G+L++A+K+L ++   
Sbjct: 293 DVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI--- 349

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW-WTPNAITYSVVMHGLRREGKLSE 427
            C PN       +NG   +G+  EA+  +N +   + + P+  TY+++MHGL +EG LS 
Sbjct: 350 PC-PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSF 408

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A D+V EM ++G  P  +   +L+  LC+ G ++ A   + E   +G  +N V +  LI 
Sbjct: 409 ARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLIC 468

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
             C+K  +  AL+LL +M      PD  TY ++I  L K  R++EA  L   ML  G V 
Sbjct: 469 ALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVA 528

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKI 604
             VTY T+IH   + G  +  L L+  ML +  C   +  YN +I+  C  G +E+  ++
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFR-GCTLDKITYNGLIKAFCKVGNIEKGLEL 587

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
             +++     AD  +C++++      G    A++      NR  +PD+     V   L  
Sbjct: 588 YEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCK 647

Query: 665 EGKSEEADTLMLRFVERGHIQPKS 688
            G+ +EA  L  R    G ++P +
Sbjct: 648 VGRIKEALNLFDRLQVEG-VRPDA 670



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 149/516 (28%), Positives = 261/516 (50%), Gaps = 15/516 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y ++LEIL      Q A  V   M  +G+      F  +M A     ++ +A  +L  M 
Sbjct: 186 YDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMT 245

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           K    PN ++  T IH L   N++++AL+ LE M + G  P+V T+N +I G C +++I 
Sbjct: 246 KHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIH 305

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------- 316
           DA KL+D M L+G  PD ++Y  ++  LC+  ++ E R ++ K+   +N   +       
Sbjct: 306 DATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYV 365

Query: 317 -QGRIEEAKELVNQ-MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             G+++EA+  +N+ M   G  PD+ TY  +++G C+ G L  A+ ++ +M   GC+PN 
Sbjct: 366 MSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNV 425

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           ++Y   +NGLC  G   EA  +++       T N++ Y+ ++  L R+ K+  A +++ E
Sbjct: 426 ITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSE 485

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M  KG  P     N LI  LC+  ++D A +     L  G   N V + +LI    ++G 
Sbjct: 486 MCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGA 545

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
            ++AL+L++DM       D +TY  +I A  K G +E+  EL  +M+  GL    ++   
Sbjct: 546 FQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNI 605

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I+  C+VG+V++  + L   +++        YN V+  LC  G ++EA  +  ++    
Sbjct: 606 MINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEG 665

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
            + DA T +  +     +G+       AC  F R +
Sbjct: 666 VRPDAFTYNTFISWQCKEGM----VNDACLFFYRGI 697



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 218/438 (49%), Gaps = 17/438 (3%)

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           L K      A +++  M  RG       + +L+    R GKL  A  +L  +      PN
Sbjct: 298 LCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPN 353

Query: 211 LLICNTAIHVLVVGNKLAKALRFL-ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
             I NT I+  V+  +L +A  FL E M   G  P++ TYN L+ G C    +  A  L+
Sbjct: 354 NAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV 413

Query: 270 DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFHD--------Q 317
           +EM  +GC P+ ++Y  ++  LCK   ++E   ++ +M    +  +++ ++        +
Sbjct: 414 NEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRK 473

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            ++  A  L+++M   GC PD+ TY +++ G C+V  +D+A ++   M   G   N V+Y
Sbjct: 474 EKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTY 533

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              ++ L   G   +A  ++N       T + ITY+ ++    + G + +  ++  +M+ 
Sbjct: 534 NTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIM 593

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G     +  N++I  LC+ GK+D A +F+++ +N+G   ++V + S++ G C+ G ++E
Sbjct: 594 DGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKE 653

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           AL+L D + +    PD  TY T I    K G V +A     + +  G VP+ +T+  +++
Sbjct: 654 ALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVY 713

Query: 558 RYCQVGRVEDLLKLLEKM 575
              +    E+   +L+++
Sbjct: 714 TLLKQSNQENNFFVLDEL 731



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 168/346 (48%), Gaps = 14/346 (4%)

Query: 175 RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           +P+ F+Y  LM    + G L  A  +++ M +    PN++     ++ L     L +A  
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGL 446

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
            L  M   G+T N + YNCLI   C   ++  A+ L+ EM  KGC PD  +Y +++  LC
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLC 506

Query: 293 KEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMGCIPDVV 340
           K  RI E   L   M+ D         + L H    +G  ++A  LVN M   GC  D +
Sbjct: 507 KVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKI 566

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TY  ++  FC+VG +++  ++ +QM   G   +T+S    +NGLC  GK   A E +  +
Sbjct: 567 TYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDA 626

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
               + P+ +TY+ V++GL + G++ EA ++   +  +G  P     N  I   C+EG +
Sbjct: 627 INRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMV 686

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           + A  F    +  G   + + +  L+    ++ + E    +LD+++
Sbjct: 687 NDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW 732



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 154/316 (48%), Gaps = 23/316 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y +++  L K  L + A  VL  M+ RG+      ++ L+ A  R  K+  A+ +LS 
Sbjct: 426 ITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSE 485

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M      P+L   N+ I+ L   +++ +A R    M L G   N +TYN LI        
Sbjct: 486 MCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGA 545

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            + A+ L+++M  +GC+ DK++Y  ++   CK                        G IE
Sbjct: 546 FQKALTLVNDMLFRGCTLDKITYNGLIKAFCK-----------------------VGNIE 582

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +  EL  QM   G   D ++   ++NG C+VG++D A + L+   + G  P+ V+Y + L
Sbjct: 583 KGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVL 642

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           NGLC  G+  EA  + +  + E   P+A TY+  +    +EG +++AC      ++ GF 
Sbjct: 643 NGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFV 702

Query: 442 PTPVEINLLIQSLCRE 457
           P+ +  N+L+ +L ++
Sbjct: 703 PSNLTWNVLVYTLLKQ 718


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 155/571 (27%), Positives = 279/571 (48%), Gaps = 22/571 (3%)

Query: 132 DRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGK 191
           D   R   D + +  +++ L K      A  V   M   G       ++ L+    +A K
Sbjct: 351 DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADK 410

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +  A  ++  M    V P+++  +  +      +++ +AL  L  M   G TPNV+T+N 
Sbjct: 411 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS 470

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
           +I G C   R  +A ++ D+M LK G  PDK++Y T++  L +  R  +   L++ M + 
Sbjct: 471 IIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDP 530

Query: 311 S--------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                    N     G +  A ++ N+M ++  +PD VT+  ++ G C+ G  +QA  + 
Sbjct: 531 DTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALF 590

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           ++M     +P+ +++ A ++GLC  G+   AR++++        PN +TY+ ++HGL + 
Sbjct: 591 EEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKS 650

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G++ EAC  + EMV  G  P  +    L+ +LCR  + D A + + E  + G   + V +
Sbjct: 651 GRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTY 710

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL---MMK 539
             L+ G  + G  E+A+++L++M      PD VTY T+ID+L K G +EEA  L   M  
Sbjct: 711 NILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS 770

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-----AYNQVIENLCS 594
            +S+  VP VVTY  +I+  C+VGR+++  +L+++M+ ++ C        YN  ++ LC 
Sbjct: 771 RVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMM-RKSCDVLPNIITYNSFLDGLCK 829

Query: 595 FGYLEEAGKILGKVLRTAS---KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              + EA +++ + LR  S     D  T   L++     G    A  V   M     +P+
Sbjct: 830 QSMMAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPN 888

Query: 652 LKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +     +   L    K E A  ++   V++G
Sbjct: 889 VVTYNVLMNGLCKTDKMERAHAMIESMVDKG 919



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 154/589 (26%), Positives = 281/589 (47%), Gaps = 55/589 (9%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y  + I Y  ++  L K    + A  ++  M  +G+      +S L+ A+ +A ++  A+
Sbjct: 391 YVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 450

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA-GITPNVLTYNCLIKG 255
            +L  M      PN++  N+ I  L   ++  +A +  + M L  G+ P+ +TY  LI G
Sbjct: 451 ELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDG 510

Query: 256 YCDLHRIKDAIKLIDEMP----------LKGCS---------------------PDKVSY 284
                R   A  L+D MP          + G S                     PDKV++
Sbjct: 511 LFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTF 570

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMS 331
             ++   CK    ++   L E+MV   NL  D              G++E A+++++ M 
Sbjct: 571 NILIAGACKAGNFEQASALFEEMVA-KNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 629

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
            +G  P+VVTY A+V+G C+ G +++A + L++M   GC P++++Y + +  LC   ++ 
Sbjct: 630 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 689

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           +A ++++  +   W P+ +TY++++ GL + G+  +A  V+ EMV KG  P  V  N LI
Sbjct: 690 DALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLI 749

Query: 452 QSLCREGKMDGAKKF---MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY-- 506
            SLC+ G ++ A++    M   +++ C  NVV ++ LI G C+ G ++EA  L+ +M   
Sbjct: 750 DSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK 809

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL--VPTVVTYRTVIHRYCQVGR 564
            C   P+ +TY + +D L K   + EA ELM  +    L   P  VT+ T+I   C+ G+
Sbjct: 810 SCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 869

Query: 565 VEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
            ++   + + M++         YN ++  LC    +E A  ++  ++      D  T  V
Sbjct: 870 TDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSV 929

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           LV+++        A ++   M +R   P++     + + L    +S EA
Sbjct: 930 LVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEA 978



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 167/610 (27%), Positives = 269/610 (44%), Gaps = 63/610 (10%)

Query: 99  LRNLLRSLKPRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
           LR     L P    A+L     +  +  QF+ WA     ++H    +   L +L K+   
Sbjct: 68  LRGCKGRLHPSVAAAILAQLDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSG-- 125

Query: 158 QGAKRVLRLMARRGIECRPEAFSY------------------------------------ 181
             AK +    +R    CRP  F+Y                                    
Sbjct: 126 SPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRSVADYNI 185

Query: 182 LMVAYSRAGKLRNAMYVL-SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
           ++ +  RAG+   A+ +    M +  VAP ++  NT I+ L   N+L   +   E +   
Sbjct: 186 VLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVER 245

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G  P+V+TYN LI   C    +++A +L  +M  + C P+ V+Y  ++  LCK  RI E 
Sbjct: 246 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEA 305

Query: 301 RDLMEKMVNDS----------NLFHD----QGRIEEAKELVNQM--SQMGCIPDVVTYTA 344
           R+L+++M   S          N F D    Q    EA EL+  +    +   PD VT++ 
Sbjct: 306 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 365

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++G C+ G++D+A  +   M   G  PN ++Y A +NGLC   K   A  MI +  ++ 
Sbjct: 366 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA- 463
            TP+ ITYSV++    +  ++ EA +++  M  +G  P  V  N +I  LC+  +   A 
Sbjct: 426 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 485

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           + F    L  G   + + + +LI G  + G   +A +LLD M     DPDT  +   I+ 
Sbjct: 486 QMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM----PDPDTYAFNCCING 541

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKC 581
           LSK G V  A ++  +ML   LVP  VT+  +I   C+ G  E    L E+M++K  Q  
Sbjct: 542 LSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 601

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              +  +I+ LC  G +E A  IL  +       +  T + LV      G    A +   
Sbjct: 602 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 661

Query: 642 RMFNRNLIPD 651
            M +   +PD
Sbjct: 662 EMVSSGCVPD 671



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/551 (26%), Positives = 250/551 (45%), Gaps = 85/551 (15%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            D + + +++    K    + A  +   M  + ++     F  L+    +AG++  A  +L
Sbjct: 566  DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 625

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +M    V PN++  N  +H L    ++ +A +FLE M  +G  P+ +TY  L+   C  
Sbjct: 626  DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 685

Query: 260  HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
             R  DA++L+ E+   G  PD V+Y  ++  L K  + ++   ++E+MV           
Sbjct: 686  SRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTY 745

Query: 312  NLFHDQ----GRIEEAKELVNQMSQM---GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
            N   D     G +EEA+ L   MS      C+P+VVTY+ ++NG C+VG +D+A++++Q+
Sbjct: 746  NTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQE 805

Query: 365  MYHHGCK--PNTVSYTAFLNGLCHNGKSLEAREMINTSEEE------------------- 403
            M    C   PN ++Y +FL+GLC      EA E++ +  +                    
Sbjct: 806  MMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 865

Query: 404  ------------------WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
                               + PN +TY+V+M+GL +  K+  A  ++  MV KG  P  +
Sbjct: 866  KCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVI 925

Query: 446  EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
              ++L+ + C+   +D A + +    ++GC  NVV F S+I G C+     EA  + DDM
Sbjct: 926  TYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDM 985

Query: 506  YLCKK-DPDTVTYTTIIDALSKNGRVEEATEL---------------------------- 536
             L     PD +TY T+ID L + G   +A  L                            
Sbjct: 986  TLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRA 1045

Query: 537  MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCS 594
            + +ML   LVP  VT+  +I   C+ G  E    L E+M++K  Q     +  +I+ LC 
Sbjct: 1046 LHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 1105

Query: 595  FGYLEEAGKIL 605
             G +E    I+
Sbjct: 1106 AGQVEATWDIM 1116



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 155/605 (25%), Positives = 261/605 (43%), Gaps = 89/605 (14%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRL-MARRG 171
           A  ++  D    L FF       R   D   Y ++L+ L +      A  + R  MAR G
Sbjct: 155 ATYKAGGDVERTLGFFRRIRSSSRSVAD---YNIVLQSLCRAGETARALEIFRGEMARDG 211

Query: 172 IECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           +      ++ ++    ++ +L   M +   + +    P+++  NT I  L     L +A 
Sbjct: 212 VAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEAR 271

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC-------------- 277
           R    M      PNV+TY+ LI G C + RI +A +LI EM  K C              
Sbjct: 272 RLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD 331

Query: 278 -------------------------SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS- 311
                                    SPD V++ T++  LCK  +I E   + + M+    
Sbjct: 332 GLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGY 391

Query: 312 -----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                      N      ++E A  ++  M   G  PDV+TY+ +V+ FC+   +D+A +
Sbjct: 392 VPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALE 451

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI-NTSEEEWWTPNAITYSVVMHGL 419
           +L  M   GC PN V++ + ++GLC + +S EA +M  + + +    P+ ITY  ++ GL
Sbjct: 452 LLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGL 511

Query: 420 RREGK-------------------------------LSEACDVVREMVKKGFFPTPVEIN 448
            R G+                               +S A  V   M++    P  V  N
Sbjct: 512 FRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFN 571

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           +LI   C+ G  + A    +E + K    +V+ F +LI G C+ G +E A  +LD M   
Sbjct: 572 ILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 631

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P+ VTY  ++  L K+GR+EEA + + +M+S G VP  +TY ++++  C+  R +D 
Sbjct: 632 GVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDA 691

Query: 569 LKLLE--KMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           L+L+   K          YN +++ L   G  E+A  +L +++      D  T + L++S
Sbjct: 692 LQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDS 751

Query: 627 YLNKG 631
               G
Sbjct: 752 LCKAG 756



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 160/352 (45%), Gaps = 31/352 (8%)

Query: 352 VGELDQAKKMLQQMYH-----HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           + +LD   ++  Q Y       G K    S+  +LN L  +G   +A ++  +       
Sbjct: 84  LAQLDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCR 143

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP-------VEINLLIQSLCREGK 459
           PN  TYS ++    + G      DV R +   GFF           + N+++QSLCR G+
Sbjct: 144 PNHFTYSTLLRATYKAGG-----DVERTL---GFFRRIRSSSRSVADYNIVLQSLCRAGE 195

Query: 460 MDGA-KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
              A + F  E    G A  +V + ++I G C+  +L   + L +++      PD VTY 
Sbjct: 196 TARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYN 255

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           T+ID+L K G +EEA  L   M S+  VP VVTY  +I+  C+VGR+++  +L+++M ++
Sbjct: 256 TLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEM-TR 314

Query: 579 QKCRT-----AYNQVIENLCSFGYLEEAGKILGKVLRTAS---KADASTCHVLVESYLNK 630
           + C        YN  ++ LC      EA +++ + LR  S     D  T   L++     
Sbjct: 315 KSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKC 373

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           G    A  V   M     +P++     +   L    K E A  ++   V++G
Sbjct: 374 GQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 127/264 (48%), Gaps = 6/264 (2%)

Query: 132  DRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGK 191
            D   R   D + +  +++ L K      A  V   M   G       ++ LM    +  K
Sbjct: 845  DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDK 904

Query: 192  LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
            +  A  ++  M    V P+++  +  +      + + +AL  L  M   G TPNV+T+N 
Sbjct: 905  MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNS 964

Query: 252  LIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN- 309
            +I G C   +  +A ++ D+M LK G +PDK++Y T++  L +     +   L++ M + 
Sbjct: 965  IIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDP 1024

Query: 310  DSNLF----HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            D+  F    +   ++ +    +++M ++  +PD VT+  ++ G C+ G  +QA  + ++M
Sbjct: 1025 DTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM 1084

Query: 366  YHHGCKPNTVSYTAFLNGLCHNGK 389
                 +P+ +++ A ++GLC  G+
Sbjct: 1085 VAKNLQPDVMTFGALIDGLCKAGQ 1108


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 257/509 (50%), Gaps = 31/509 (6%)

Query: 125 LQFF---YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           +QFF    +  + W    DP V+ +  ++L    L + A+RV   M   G+    ++ + 
Sbjct: 158 VQFFDLLVYTYKDWG--SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNV 215

Query: 182 LMVAYSR-AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
            +   S+   K   A+ V     +  V  N+   N  IH +    ++ +A   L  M+L 
Sbjct: 216 YLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK 275

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G TP+V++Y+ ++ GYC    +    KLI+ M  KG  P+   Y +++G LC+       
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR------- 328

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                             ++ EA+E  ++M + G +PD V YT +++GFC+ G++  A K
Sbjct: 329 ----------------ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
              +M+     P+ ++YTA ++G C  G  +EA ++ +    +   P+++T++ +++G  
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           + G + +A  V   M++ G  P  V    LI  LC+EG +D A + + E    G   N+ 
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + S++ G C+ G++EEA+ L+ +      + DTVTYTT++DA  K+G +++A E++ +M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYL 598
           L KGL PT+VT+  +++ +C  G +ED  KLL  ML+K      T +N +++  C    L
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESY 627
           + A  I   +       D  T   LV+ +
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGH 641



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 224/444 (50%), Gaps = 12/444 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y +++  + +    + A  +L LM  +G      ++S ++  Y R G+L     ++ +M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           +  + PN  I  + I +L    KLA+A      M   GI P+ + Y  LI G+C    I+
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----NDSNLFHD-- 316
            A K   EM  +  +PD ++Y  ++   C+   + E   L  +M       DS  F +  
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428

Query: 317 -----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 G +++A  + N M Q GC P+VVTYT +++G C+ G+LD A ++L +M+  G +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN  +Y + +NGLC +G   EA +++   E      + +TY+ +M    + G++ +A ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           ++EM+ KG  PT V  N+L+   C  G ++  +K +   L KG A N   F SL++ +C 
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           + +L+ A ++  DM      PD  TY  ++    K   ++EA  L  +M  KG   +V T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKM 575
           Y  +I  + +  +  +  ++ ++M
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQM 692



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 200/407 (49%), Gaps = 16/407 (3%)

Query: 297 IKEVRDLMEKMVN-------DS------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           ++E R + EKM+N       DS       L  D  +   A  +  +  ++G   +V +Y 
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            V++  C++G + +A  +L  M   G  P+ +SY+  +NG C  G+  +  ++I   + +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              PN+  Y  ++  L R  KL+EA +   EM+++G  P  V    LI   C+ G +  A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            KF  E  ++    +V+ +T++I GFCQ GD+ EA  L  +M+    +PD+VT+T +I+ 
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKC 581
             K G +++A  +   M+  G  P VVTY T+I   C+ G ++   +LL +M  +  Q  
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              YN ++  LC  G +EEA K++G+       AD  T   L+++Y   G    A ++  
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
            M  + L P +     +     L G  E+ + L+   + +G I P +
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPNA 596



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 192/408 (47%), Gaps = 23/408 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + +  +Y  ++ +L +      A+     M R+GI      ++ L+  + + G +R A  
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
               M    + P++L     I        + +A +    M   G+ P+ +T+  LI GYC
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               +KDA ++ + M   GCSP+ V+Y T++  LCKE                       
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE----------------------- 469

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G ++ A EL+++M ++G  P++ TY ++VNG C+ G +++A K++ +    G   +TV+Y
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T  ++  C +G+  +A+E++     +   P  +T++V+M+G    G L +   ++  M+ 
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P     N L++  C    +  A    ++  ++G   +   + +L++G C+  +++E
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           A  L  +M          TY+ +I    K  +  EA E+  +M  +GL
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 257/509 (50%), Gaps = 31/509 (6%)

Query: 125  LQFF---YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
            +QFF    +  + W    DP V+ +  ++L    L + A+RV   M   G+    ++ + 
Sbjct: 601  VQFFDLLVYTYKDWG--SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNV 658

Query: 182  LMVAYSR-AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
             +   S+   K   A+ V     +  V  N+   N  IH +    ++ +A   L  M+L 
Sbjct: 659  YLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK 718

Query: 241  GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
            G TP+V++Y+ ++ GYC    +    KLI+ M  KG  P+   Y +++G LC+       
Sbjct: 719  GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR------- 771

Query: 301  RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                              ++ EA+E  ++M + G +PD V YT +++GFC+ G++  A K
Sbjct: 772  ----------------ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 815

Query: 361  MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
               +M+     P+ ++YTA ++G C  G  +EA ++ +    +   P+++T++ +++G  
Sbjct: 816  FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 875

Query: 421  REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
            + G + +A  V   M++ G  P  V    LI  LC+EG +D A + + E    G   N+ 
Sbjct: 876  KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 935

Query: 481  NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
             + S++ G C+ G++EEA+ L+ +      + DTVTYTT++DA  K+G +++A E++ +M
Sbjct: 936  TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995

Query: 541  LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYL 598
            L KGL PT+VT+  +++ +C  G +ED  KLL  ML+K      T +N +++  C    L
Sbjct: 996  LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 1055

Query: 599  EEAGKILGKVLRTASKADASTCHVLVESY 627
            + A  I   +       D  T   LV+ +
Sbjct: 1056 KAATAIYKDMCSRGVGPDGKTYENLVKGH 1084



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 224/444 (50%), Gaps = 12/444 (2%)

Query: 144  YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
            Y +++  + +    + A  +L LM  +G      ++S ++  Y R G+L     ++ +M+
Sbjct: 692  YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751

Query: 204  KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
            +  + PN  I  + I +L    KLA+A      M   GI P+ + Y  LI G+C    I+
Sbjct: 752  RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811

Query: 264  DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----NDSNLFHD-- 316
             A K   EM  +  +PD ++Y  ++   C+   + E   L  +M       DS  F +  
Sbjct: 812  AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871

Query: 317  -----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                  G +++A  + N M Q GC P+VVTYT +++G C+ G+LD A ++L +M+  G +
Sbjct: 872  NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931

Query: 372  PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            PN  +Y + +NGLC +G   EA +++   E      + +TY+ +M    + G++ +A ++
Sbjct: 932  PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 991

Query: 432  VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
            ++EM+ KG  PT V  N+L+   C  G ++  +K +   L KG A N   F SL++ +C 
Sbjct: 992  LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 1051

Query: 492  KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            + +L+ A ++  DM      PD  TY  ++    K   ++EA  L  +M  KG   +V T
Sbjct: 1052 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 1111

Query: 552  YRTVIHRYCQVGRVEDLLKLLEKM 575
            Y  +I  + +  +  +  ++ ++M
Sbjct: 1112 YSVLIKGFLKRKKFLEAREVFDQM 1135



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 200/407 (49%), Gaps = 16/407 (3%)

Query: 297  IKEVRDLMEKMVN-------DS------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
            ++E R + EKM+N       DS       L  D  +   A  +  +  ++G   +V +Y 
Sbjct: 634  LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 693

Query: 344  AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
             V++  C++G + +A  +L  M   G  P+ +SY+  +NG C  G+  +  ++I   + +
Sbjct: 694  IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 753

Query: 404  WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
               PN+  Y  ++  L R  KL+EA +   EM+++G  P  V    LI   C+ G +  A
Sbjct: 754  GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 813

Query: 464  KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
             KF  E  ++    +V+ +T++I GFCQ GD+ EA  L  +M+    +PD+VT+T +I+ 
Sbjct: 814  SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 873

Query: 524  LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKC 581
              K G +++A  +   M+  G  P VVTY T+I   C+ G ++   +LL +M  +  Q  
Sbjct: 874  YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 933

Query: 582  RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
               YN ++  LC  G +EEA K++G+       AD  T   L+++Y   G    A ++  
Sbjct: 934  IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 993

Query: 642  RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
             M  + L P +     +     L G  E+ + L+   + +G I P +
Sbjct: 994  EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPNA 1039



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 190/403 (47%), Gaps = 23/403 (5%)

Query: 143  VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            +Y  ++ +L +      A+     M R+GI      ++ L+  + + G +R A      M
Sbjct: 761  IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 820

Query: 203  QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
                + P++L     I        + +A +    M   G+ P+ +T+  LI GYC    +
Sbjct: 821  HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 880

Query: 263  KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
            KDA ++ + M   GCSP+ V+Y T++  LCKE                       G ++ 
Sbjct: 881  KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE-----------------------GDLDS 917

Query: 323  AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
            A EL+++M ++G  P++ TY ++VNG C+ G +++A K++ +    G   +TV+YT  ++
Sbjct: 918  ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 977

Query: 383  GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
              C +G+  +A+E++     +   P  +T++V+M+G    G L +   ++  M+ KG  P
Sbjct: 978  AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1037

Query: 443  TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
                 N L++  C    +  A    ++  ++G   +   + +L++G C+  +++EA  L 
Sbjct: 1038 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 1097

Query: 503  DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
             +M          TY+ +I    K  +  EA E+  +M  +GL
Sbjct: 1098 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 130/302 (43%), Gaps = 27/302 (8%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
            D + +  ++    K    + A RV   M + G  C P   +Y  L+    + G L +A  
Sbjct: 863  DSVTFTELINGYCKAGHMKDAFRVHNHMIQAG--CSPNVVTYTTLIDGLCKEGDLDSANE 920

Query: 198  VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            +L  M K  + PN+   N+ ++ L     + +A++ +   + AG+  + +TY  L+  YC
Sbjct: 921  LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 980

Query: 258  DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
                +  A +++ EM  KG  P  V++  +M   C                         
Sbjct: 981  KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL-----------------------H 1017

Query: 318  GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            G +E+ ++L+N M   G  P+  T+ ++V  +C    L  A  + + M   G  P+  +Y
Sbjct: 1018 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 1077

Query: 378  TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
               + G C      EA  +    + + ++ +  TYSV++ G  +  K  EA +V  +M +
Sbjct: 1078 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 1137

Query: 438  KG 439
            +G
Sbjct: 1138 EG 1139


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 163/558 (29%), Positives = 277/558 (49%), Gaps = 56/558 (10%)

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV-----VGNKLAKALRFLERMQL 239
           AY    +  +A  + + M++  + PNLL CNT I+ LV         L+KA+ F + ++L
Sbjct: 148 AYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI-FSDVIKL 206

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
            G+  N  T+N LI G C  +++ +AI LI +M    C PD VSY T++  LCK+ ++ E
Sbjct: 207 -GVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNE 265

Query: 300 VRDLMEKMVNDS-----NLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
            RDL+  M N+      N F+         G ++EA ++++ M+Q   +PDV TY  ++ 
Sbjct: 266 ARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIG 325

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G C+ G++D+A ++  +M +    P+ V+Y   +NG      SL+  E+I+  E +   P
Sbjct: 326 GLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKP 385

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG--------- 458
           NA+TY+VV+    +EGK+  A + +R+M + GF P  V  N LI   C+ G         
Sbjct: 386 NAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMM 445

Query: 459 --------------------------KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
                                     K+D A K +     +G  V+ V++ +LI G+ + 
Sbjct: 446 DEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKD 505

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G   EA+ L D+M   +  P  +TY T+I  L  +G+ +++ + + ++L  GLVP   TY
Sbjct: 506 GKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTY 565

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLR 610
            T+I  YC+ G+VE   +   KM+ K      +  N ++  LC+ G L++A K+    + 
Sbjct: 566 NTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWIS 625

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                DA T + ++     +     A+ +   M  + L PD      +   L   G+ +E
Sbjct: 626 KGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKE 685

Query: 671 ADTLMLRFVERGHIQPKS 688
           A+  M R VE+G +Q ++
Sbjct: 686 AEEFMSRIVEQGKLQDQT 703



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 232/482 (48%), Gaps = 27/482 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +L++L K      A+ +L  M   G+      F+ L+  Y + G L+ A  V+
Sbjct: 246 DNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVI 305

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +  V P++   N  I  L    K+ +A R  + M+   + P+V+TYN LI G  D 
Sbjct: 306 DLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDC 365

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
                  +LID+M  KG  P+ V+Y  V+ +  KE                       G+
Sbjct: 366 SSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKE-----------------------GK 402

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++ A   + +M + G  PD VT+  ++NG+C+ G L +A +M+ +M   G K N+V+   
Sbjct: 403 MDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNT 462

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L+ LC   K  +A ++++++ +  +  + ++Y  ++ G  ++GK  EA  +  EM +K 
Sbjct: 463 ILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKE 522

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P+ +  N +I  LC  GK D +   + E L  G   +   + ++I G+C++G +E+A 
Sbjct: 523 IIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAF 582

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
              + M      PD  T   ++  L   G +++A +L    +SKG     VTY T+I   
Sbjct: 583 QFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGL 642

Query: 560 CQVGRVEDLLKLLEKMLSKQ---KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           C+  R E+   LL +M  K+    C T YN ++  L   G ++EA + + +++      D
Sbjct: 643 CKEDRFEEAFDLLAEMEEKKLGPDCYT-YNAILSALADAGRMKEAEEFMSRIVEQGKLQD 701

Query: 617 AS 618
            +
Sbjct: 702 QT 703



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 175/390 (44%), Gaps = 35/390 (8%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + + + Y ++++   K      A   LR M   G       F+ L+  Y +AG+L  A  
Sbjct: 384 KPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFR 443

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           ++  M +  +  N +  NT +H L    KL  A + L      G   + ++Y  LI GY 
Sbjct: 444 MMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYF 503

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC----KEKRIKEVRDLMEK-MVNDSN 312
              +  +A+KL DEM  K   P  ++Y T++G LC     ++ I ++ +L+E  +V D  
Sbjct: 504 KDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDET 563

Query: 313 LFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            ++        +G++E+A +  N+M +    PD+ T   ++ G C  G LD+A K+    
Sbjct: 564 TYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTW 623

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G   + V+Y   ++GLC   +  EA +++   EE+   P+  TY+ ++  L   G++
Sbjct: 624 ISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRM 683

Query: 426 SEACDVVREMVKKGFF-----------------------PTPVEINLLIQSLCREGKMDG 462
            EA + +  +V++G                         P  V  +  I  LC +GK   
Sbjct: 684 KEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKD 743

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           A   +QE   KG  ++   + SL+ G  ++
Sbjct: 744 AMHMVQESTQKGITLHKSTYISLMEGLIKR 773



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 147/328 (44%), Gaps = 36/328 (10%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + + +    +L  L   +    A ++L   ++RG      ++  L++ Y + GK   AM 
Sbjct: 454 KMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMK 513

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M++  + P+++  NT I  L    K  +++  L  +  +G+ P+  TYN +I GYC
Sbjct: 514 LWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYC 573

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSN 312
              +++ A +  ++M  K   PD  +   ++  LC E  + +   L    ++     D+ 
Sbjct: 574 REGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAV 633

Query: 313 LFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            ++        + R EEA +L+ +M +    PD  TY A+++     G + +A++ + ++
Sbjct: 634 TYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRI 693

Query: 366 YHHG-----------------------CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
              G                         PN+V+++  +N LC  GK  +A  M+  S +
Sbjct: 694 VEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQ 753

Query: 403 EWWTPNAITYSVVMHGL-RREGKLSEAC 429
           +  T +  TY  +M GL +R   +S +C
Sbjct: 754 KGITLHKSTYISLMEGLIKRRKSISRSC 781


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 168/614 (27%), Positives = 297/614 (48%), Gaps = 32/614 (5%)

Query: 98  ELRNLLRSLKP---RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKT 154
           +L++L RSL P    Q+C +L    D   ++  F  A  Q  Y H   VYY++++ L   
Sbjct: 48  DLKHLQRSLNPITPSQLCKLLELPLDVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNV 107

Query: 155 KLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM-YVLSMMQKAAVAPNLLI 213
              +   ++L+ M   G   +   F  +M  Y +AG    A   +L M       P    
Sbjct: 108 GEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKS 167

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
            N  + +LV GN    A      M   GI+P V T+  ++K +C ++ +  A  L+ +M 
Sbjct: 168 YNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMT 227

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----NDSNLFHD-------QGRIE 321
             GC P+ + Y  ++  L +  R+ E   L+E+M       D   F+D        GRI 
Sbjct: 228 KHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIH 287

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA +L ++M       D +    +++G CR+G++D+A+ ML ++ +    PNTV Y   +
Sbjct: 288 EAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLI 343

Query: 382 NGLCHNGKSLEAREMINTSEE-EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           NG   +G+  EA++++  +     + P+A T+++++ GL ++G L  A + + EMVKKGF
Sbjct: 344 NGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGF 403

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  +   +LI   C++G  + A K +     KG ++N V +  LI   C+ G +++AL 
Sbjct: 404 EPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQ 463

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           +  +M      PD  T+ ++I  L KN ++EEA  L   ML +G++   VTY T+IH + 
Sbjct: 464 MYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFL 523

Query: 561 QVGRVEDLLKLLEKMLSKQKCR------TAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           ++    +L++  +K++ + + R        YN +I+ LC  G  E+   ++ ++      
Sbjct: 524 RL----ELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF 579

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
              ++C++L+ S+   G    A +    M  R L PD+     +   L   G+ +EA  L
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL 639

Query: 675 MLRFVERGHIQPKS 688
                 +G I P +
Sbjct: 640 FNGLQAKG-IHPDA 652



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 256/519 (49%), Gaps = 11/519 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y ++LEIL      + A  V   M  RGI      F  +M A+    ++ +A  +L  M 
Sbjct: 168 YNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMT 227

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           K    PN +I    IH L   N++ +A++ LE M L G  P+V T+N +I G C   RI 
Sbjct: 228 KHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIH 287

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------- 316
           +A KL D M L+  + D +    +M  LC+  ++ E R ++ K+ N + + ++       
Sbjct: 288 EAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYV 347

Query: 317 -QGRIEEAKELV-NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             GR EEAK+L+   M   G  PD  T+  +++G C+ G L  A + L +M   G +PN 
Sbjct: 348 VSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNV 407

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           ++YT  ++G C  G   EA +++N+   +  + N + Y+ ++  L ++GK+ +A  +  E
Sbjct: 408 ITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE 467

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M  KG  P     N LI  LC+  KM+ A    ++ L +G   N V + +LI  F +   
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           +++A  L+ +M       D +TY  +I AL K G  E+   L+ +M  + + P++ +   
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I+ +C+ G+V D L+ L  M+ +        YN +I  LC  G  +EA  +   +    
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              DA T + L+  Y  +G+   A ++  +  +   IP+
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPN 686



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 166/350 (47%), Gaps = 16/350 (4%)

Query: 167 MARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           M   G E  P+AF++  ++    + G L +A+  L  M K    PN++     I      
Sbjct: 363 MVIAGFE--PDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQ 420

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
               +A + +  M   G++ N + YNCLI   C   +I+DA+++  EM  KGC PD  ++
Sbjct: 421 GHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTF 480

Query: 285 YTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHDQGRIE---EAKELVNQMSQ 332
            +++  LCK  +++E   L   M         V  + L H   R+E   +A +LV +M  
Sbjct: 481 NSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRF 540

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            GC  D +TY  ++   C+ G  ++   +++QM+     P+  S    +N  C  GK  +
Sbjct: 541 RGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVND 600

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A + +    +   TP+ +TY+ +++GL + G+  EA ++   +  KG  P  V  N LI 
Sbjct: 601 ALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLIS 660

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             C EG  + A + + + ++ G   N + ++ LI  F +     E  ++L
Sbjct: 661 RYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTIL 710



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 158/317 (49%), Gaps = 14/317 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  + I Y ++++   K    + A +V+  M+ +G+      ++ L+ A  + GK+++A+
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   M      P++   N+ I+ L   +K+ +AL     M L G+  N +TYN LI  +
Sbjct: 463 QMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAF 522

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------V 308
             L  I+ A KL+ EM  +GC  D ++Y  ++  LCK    ++   L+E+M        +
Sbjct: 523 LRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSI 582

Query: 309 NDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           N  N+    F   G++ +A + +  M Q G  PD+VTY +++NG C++G   +A  +   
Sbjct: 583 NSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNG 642

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           +   G  P+ V+Y   ++  C+ G   +A +++       + PN IT+S++++   +   
Sbjct: 643 LQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNS 702

Query: 425 LSEACDVVREMVKKGFF 441
            SE   ++  M   GF+
Sbjct: 703 DSEQFTIL--MGNWGFW 717


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 173/615 (28%), Positives = 289/615 (46%), Gaps = 59/615 (9%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           L++++ ++ P  + ++     D + AL F +W  +  RY+H    Y  +L +L       
Sbjct: 81  LKSMVPAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYV- 139

Query: 159 GAKRVLRLMARRGIE-----------CRP----EAF-----------SYLMVAYSRAGKL 192
           G    +RL+  +  +           CR     E+F           + L+ + +R G +
Sbjct: 140 GVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLV 199

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
                V   M +  V PN+   N  ++       + +A +++  +  AG+ P+  TY  L
Sbjct: 200 DEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSL 259

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I GYC    +  A K+  EMPLKGC  ++V+Y  ++  LC E+RI E  DL  KM +D  
Sbjct: 260 IMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDD- 318

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                                 C P V TYT ++   C      +A  ++++M   G KP
Sbjct: 319 ----------------------CYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKP 356

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N  +YT  ++ LC   K  +ARE++    E+   PN ITY+ +++G  + G + +A DVV
Sbjct: 357 NIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVV 416

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             M  +   P     N LI+  C+   +  A   + + L +    +VV + SLI G C+ 
Sbjct: 417 ELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475

Query: 493 GDLEEA---LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           G+ + A   LSL++D  L    PD  TYT++ID+L K+ RVEEA +L   +  K ++P V
Sbjct: 476 GNFDSAYRLLSLMNDRGLV---PDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNV 532

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGK 607
           V Y  +I  YC+ G+V +   +LEKMLSK        +N +I  LC+ G L+EA  +  K
Sbjct: 533 VMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEK 592

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +++   +   ST  +L+   L  G    AY+   +M +    PD        +    EG+
Sbjct: 593 MVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652

Query: 668 SEEADTLMLRFVERG 682
            ++A+ ++ +  E G
Sbjct: 653 LQDAEDMVAKMKENG 667



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 145/537 (27%), Positives = 254/537 (47%), Gaps = 21/537 (3%)

Query: 132 DRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYS 187
           D  +  ++  I+  Y  +L  L++  L    K+V   M    + C P  ++Y  ++  Y 
Sbjct: 172 DESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKV-C-PNIYTYNKMVNGYC 229

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           + G +  A   +SM+ +A + P+     + I        L  A +  + M L G   N +
Sbjct: 230 KVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEV 289

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            Y  LI G C   RI +A+ L  +M    C P   +Y  ++  LC  +R  E  +L+++M
Sbjct: 290 AYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEM 349

Query: 308 --------VNDSNLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                   ++   +  D    Q ++E+A+EL+ QM + G +P+V+TY A++NG+C+ G +
Sbjct: 350 EEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           + A  +++ M     +PNT +Y   + G C      +A  ++N   E    P+ +TY+ +
Sbjct: 410 EDALDVVELMESRNLRPNTRTYNELIKGYCKRNVH-KAMGVLNKMLERKVLPDVVTYNSL 468

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + G  R G    A  ++  M  +G  P P     +I SLC+  +++ A         K  
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDV 528

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             NVV +T+LI G+C+ G + EA  +L+ M      P+++T+  +I  L  +G+++EAT 
Sbjct: 529 IPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATL 588

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLC 593
           L  KM+   L PTV T   +IHR  + G  +   +  ++MLS      A  Y   I+  C
Sbjct: 589 LEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYC 648

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
             G L++A  ++ K+       D  T   L++ Y + G    A+ V  RM +    P
Sbjct: 649 REGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEP 705



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 140/548 (25%), Positives = 259/548 (47%), Gaps = 40/548 (7%)

Query: 173 ECRPEAFSYLMVAYSRAGKLRN--AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           +C P   +Y ++  +  G  R   A+ ++  M++  + PN+      I  L    KL KA
Sbjct: 318 DCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKA 377

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
              L +M   G+ PNV+TYN LI GYC    I+DA+ +++ M  +   P+  +Y  ++  
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKG 437

Query: 291 LCKEKRIKEV--------RDLMEKMVNDSNLFHDQ---GRIEEAKELVNQMSQMGCIPDV 339
            CK    K +        R ++  +V  ++L   Q   G  + A  L++ M+  G +PD 
Sbjct: 438 YCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDP 497

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            TYT++++  C+   +++A  +   +      PN V YTA ++G C  GK  EA  M+  
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEK 557

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
              +   PN++T++ ++HGL  +GKL EA  +  +MVK    PT     +LI  L ++G 
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGD 617

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
            D A +  Q+ L+ G   +   +T+ I+ +C++G L++A  ++  M      PD  TY++
Sbjct: 618 FDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSS 677

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV--GRVED---------- 567
           +I      GR   A  ++ +M   G  P+  T+ ++I    ++  G+V+           
Sbjct: 678 LIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSN 737

Query: 568 ------LLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
                 +++LLEKM+       A  Y +++  +C  G L  A K+   +     K   S 
Sbjct: 738 MMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHM---QQKEGISP 794

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNL----IPDLKLCKKVSERLILEGKSEEADTLM 675
             ++  + L+    L  +  A ++ +  +    +P L+ CK +  RL  +G+ E   ++ 
Sbjct: 795 SELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVF 854

Query: 676 LRFVERGH 683
              ++ G+
Sbjct: 855 QNLLQCGY 862



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 200/463 (43%), Gaps = 66/463 (14%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  M  R +      ++ L+    R+G   +A  +LS+M    + P+     + I 
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMID 505

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    ++ +A    + ++   + PNV+ Y  LI GYC   ++ +A  ++++M  K C P
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLP 565

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMV---------NDSNLFHD-------------- 316
           + +++  ++  LC + ++KE   L EKMV          D+ L H               
Sbjct: 566 NSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRF 625

Query: 317 ------------------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
                                   +GR+++A+++V +M + G  PD+ TY++++ G+  +
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDL 685

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLN---------------GLCHNGKSLE---AR 394
           G  + A  +L++M+  GC+P+  ++ + +                G+C     +E     
Sbjct: 686 GRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVV 745

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK-GFFPTPVEINLLIQS 453
           E++    E   TPNA +Y  +M G+   G L  A  V   M +K G  P+ +  N L+  
Sbjct: 746 ELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSC 805

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C+  K + A K + + +  G    + +   LI    +KG+ E   S+  ++  C    D
Sbjct: 806 CCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDD 865

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            + +  IID + K G VE   EL   M   G   +  TY  +I
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLI 908



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 204/500 (40%), Gaps = 67/500 (13%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  ++    K  + + A  V+ LM  R +      ++ L+  Y +   +  AM VL+ 
Sbjct: 394 ITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNK 452

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  V P+++  N+ I           A R L  M   G+ P+  TY  +I   C   R
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKR 512

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------N 312
           +++A  L D +  K   P+ V Y  ++   CK  ++ E   ++EKM++ +          
Sbjct: 513 VEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA 572

Query: 313 LFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L H     G+++EA  L  +M ++   P V T T +++   + G+ D A +  QQM   G
Sbjct: 573 LIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSG 632

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            KP+  +YT F+   C  G+  +A +M+   +E   +P+  TYS ++ G    G+ + A 
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAF 692

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLC--REGKMDGAK----------------KFMQECL 471
            V++ M   G  P+      LI+ L   + GK+ G +                + +++ +
Sbjct: 693 VVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMV 752

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDL------------------------------------ 495
             G   N  ++  L+ G C+ G+L                                    
Sbjct: 753 EHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKH 812

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            EA  ++DDM      P   +   +I  L K G  E  T +   +L  G     + ++ +
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKII 872

Query: 556 IHRYCQVGRVEDLLKLLEKM 575
           I    + G VE   +L   M
Sbjct: 873 IDGVGKQGLVEAFYELFNVM 892



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/415 (21%), Positives = 164/415 (39%), Gaps = 66/415 (15%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           DP  Y  M++ L K+K  + A  +   + ++ +      ++ L+  Y +AGK+  A  +L
Sbjct: 496 DPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLML 555

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M      PN L  N  IH L    KL +A    E+M    + P V T   LI      
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKD 615

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH- 315
                A +   +M   G  PD  +Y T +   C+E R+++  D++ KM  +    +LF  
Sbjct: 616 GDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTY 675

Query: 316 --------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN---------------GFCRV 352
                   D GR   A  ++ +M   GC P   T+ +++                G C +
Sbjct: 676 SSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVM 735

Query: 353 G---ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN-TSEEEWWTPN 408
               E D   ++L++M  HG  PN  SY   + G+C  G    A ++ +   ++E  +P+
Sbjct: 736 SNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPS 795

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMV-------------------------------- 436
            + ++ ++    +  K +EA  VV +M+                                
Sbjct: 796 ELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQ 855

Query: 437 ---KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
              + G++   +   ++I  + ++G ++   +        GC  +   ++ LI G
Sbjct: 856 NLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 156/522 (29%), Positives = 255/522 (48%), Gaps = 20/522 (3%)

Query: 123 VALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYL 182
           ++ + F    +   ++     +Y ++E  + +      ++VL  M         ++F  +
Sbjct: 54  ISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVM 113

Query: 183 MVAYSRAGKLRNAMYVLSMMQ-KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA- 240
             AY +A     A+ +   M  +    P +   N+ ++V++      +AL F   +  A 
Sbjct: 114 FKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAK 173

Query: 241 --GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
              I PNVL++N +IK  C L  + +AI+L  EMP++ C PD  +Y T+M  LCK  RI 
Sbjct: 174 DMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRID 233

Query: 299 EVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           E   L+++M  +             N    +G      +LV+ M   GC+P+ VTY  ++
Sbjct: 234 EAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLI 293

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C  G+LD+A  +L +M    C PN V+Y   +NGL   G++L+   ++   EE  + 
Sbjct: 294 HGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYI 353

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            N   YSV++ GL +EGK  EA  + +E + KG     V  + L+  LCR+ K D A K 
Sbjct: 354 VNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKI 413

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           + E  +KGCA N   F+SL++GF + G+  +A+ +  DM       + V Y+ +I  L K
Sbjct: 414 LSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCK 473

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML----SKQKCR 582
           +G+V EA  +  KML+ G  P VV Y ++I   C  G VE+ LKL  +ML      Q   
Sbjct: 474 DGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDV 533

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
             YN +   LC    +  A  +L  +L      D  TC++ +
Sbjct: 534 ITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFL 575



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 200/465 (43%), Gaps = 49/465 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  +++ L K      A  +L  M   G    P  F+ L+    + G       ++
Sbjct: 215 DAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLV 274

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M      PN +  NT IH L +  KL KAL  L+RM  +   PN +TY  +I G    
Sbjct: 275 DNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQ 334

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R  D  +++  M  +G   ++  Y  ++  L KE                       G+
Sbjct: 335 GRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKE-----------------------GK 371

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            EEA  L  +    GC  + V Y+A+V+G CR  + D+A K+L +M   GC PN  ++++
Sbjct: 372 SEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSS 431

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            + G    G S +A E+     +     N + YSV++HGL ++GK+ EA  V  +M+  G
Sbjct: 432 LMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATG 491

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQE--CLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
             P  V  + +IQ LC  G ++ A K   E  CL      +V+ +  L    C++  +  
Sbjct: 492 CRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISR 551

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALS---------------------KNGRVEEATEL 536
           A+ LL+ M     DPD VT    +  L                      K  R   A+++
Sbjct: 552 AVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKI 611

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           +  ML K L P   T+  V+H  CQ  +++    +++K  SK  C
Sbjct: 612 VEVMLQKFLSPKASTWARVVHELCQPKKIQ---AVIDKCWSKLYC 653



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 160/320 (50%), Gaps = 14/320 (4%)

Query: 322 EAKELVNQMS-QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH--GCK-----PN 373
           +A EL  +MS +  C P V ++ +V+N   + G  D+A     + Y+H  G K     PN
Sbjct: 125 KAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRA----LEFYNHVVGAKDMNILPN 180

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            +S+   +  +C  G    A E+          P+A TY  +M GL +  ++ EA  ++ 
Sbjct: 181 VLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLD 240

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM  +G FP+P   N+LI  LC++G      K +     KGC  N V + +LI G C KG
Sbjct: 241 EMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 300

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            L++ALSLLD M   K  P+ VTY TII+ L K GR  +   +++ M  +G +     Y 
Sbjct: 301 KLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYS 360

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQ-KCRTA-YNQVIENLCSFGYLEEAGKILGKVLRT 611
            ++    + G+ E+ ++L ++ + K  K  T  Y+ +++ LC     +EA KIL ++   
Sbjct: 361 VLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDK 420

Query: 612 ASKADASTCHVLVESYLNKG 631
               +A T   L++ +   G
Sbjct: 421 GCAPNAFTFSSLMKGFFEVG 440



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 118/246 (47%), Gaps = 5/246 (2%)

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECL---NKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           PT    N ++  + + G  D A +F    +   +     NV++F  +I+  C+ G ++ A
Sbjct: 141 PTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNA 200

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           + L  +M + K  PD  TY T++D L K  R++EA  L+ +M  +G  P+  T+  +I+ 
Sbjct: 201 IELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLING 260

Query: 559 YCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            C+ G    + KL++ M  K        YN +I  LC  G L++A  +L +++ +    +
Sbjct: 261 LCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPN 320

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
             T   ++   + +G  L   +V   M  R  I +  +   +   L  EGKSEEA  L  
Sbjct: 321 EVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFK 380

Query: 677 RFVERG 682
             +++G
Sbjct: 381 ESMDKG 386



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 9/217 (4%)

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD----PDTVTYTTIIDALSKNGRV 530
           C   V +F S++    Q G  + AL   + + +  KD    P+ +++  II ++ K G V
Sbjct: 139 CKPTVKSFNSVLNVIIQAGFHDRALEFYNHV-VGAKDMNILPNVLSFNLIIKSMCKLGLV 197

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQ 587
           + A EL  +M  +  VP   TY T++   C+V R+++ + LL++M   + C      +N 
Sbjct: 198 DNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEM-QIEGCFPSPATFNV 256

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I  LC  G      K++  +       +  T + L+     KG    A  +  RM +  
Sbjct: 257 LINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSK 316

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
            +P+      +   L+ +G++ +   +++   ERG+I
Sbjct: 317 CVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYI 353


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 177/638 (27%), Positives = 289/638 (45%), Gaps = 48/638 (7%)

Query: 75  HPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQ 134
           HP     C+ + L      KL    + L + L          S +D   +  F    D  
Sbjct: 84  HPFFDSHCKCLSLHILTRFKLYKTAQTLAQELA--------LSASDPSGSSIFQCLKDSY 135

Query: 135 WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV----AYSRAG 190
             Y     V+ +M++  S   +   A   + L    G    P   SY  V      SR  
Sbjct: 136 HVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGF--MPGVLSYNSVLDAIVRSRGS 193

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
              +A  V   M ++ V+PN+   N  I       +L K L     M+  G  PNV+TYN
Sbjct: 194 VKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYN 253

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--- 307
            LI  YC + RI +A  L+  M  KG  P+ +SY  ++  LC+E  +KE  +++E+M   
Sbjct: 254 TLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK 313

Query: 308 ------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                 V  + L +    +G   +A  +  +M + G  P VVTYTA++N  C+   L++A
Sbjct: 314 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 373

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            +   QM   G +PN  +YT  ++G    G   EA  ++N   E  ++P+ +TY+  +HG
Sbjct: 374 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 433

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
                ++ EA  VV+EMV+KG  P  V  + +I   CR+G++D A +  QE + KG + +
Sbjct: 434 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 493

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            V ++SLI+G C+   L EA  L  +M      PD  TYTT+I+A    G + +A  L  
Sbjct: 494 AVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD 553

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIEN----- 591
           +M+ KG +P  VTY  +I+   +  R  +  +LL K++ ++   +   Y+ +IEN     
Sbjct: 554 EMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIE 613

Query: 592 ----------LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
                      C  G + EA ++   ++    K   +  +V++  +   G    A+ +  
Sbjct: 614 FKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYK 673

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEE-----ADTL 674
            M +   +P       + + L  EG +EE      DTL
Sbjct: 674 EMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL 711



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 158/547 (28%), Positives = 269/547 (49%), Gaps = 36/547 (6%)

Query: 114 VLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRG-- 171
           +L+SQ D+ + L+F  WA     +  D     + L IL++ KL + A+ + + +A     
Sbjct: 64  LLKSQFDQTLTLKFLTWARNHPFF--DSHCKCLSLHILTRFKLYKTAQTLAQELALSASD 121

Query: 172 ------IECRPEA----------FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
                  +C  ++          F  ++ +YS    +  A+  +++ + +   P +L  N
Sbjct: 122 PSGSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYN 181

Query: 216 TAIHVLV--VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           + +  +V   G+    A      M  + ++PNV TYN LI+G+C +  ++  +    EM 
Sbjct: 182 SVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEME 241

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIE 321
             GC P+ V+Y T++   CK  RI E   L++ M +              N    +G ++
Sbjct: 242 RNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMK 301

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA E++ +M   G  PD VTY  ++NG+C+ G   QA  +  +M  +G  P+ V+YTA +
Sbjct: 302 EAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALI 361

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           N +C       A E  +        PN  TY+ ++ G  R+G L+EA  ++ EM + GF 
Sbjct: 362 NSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 421

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P+ V  N  I   C   +M+ A   +QE + KG A +VV+++++I GFC+KG+L+ A  +
Sbjct: 422 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 481

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
             +M      PD VTY+++I  L +  R+ EA +L  +ML  GL P   TY T+I+ YC 
Sbjct: 482 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 541

Query: 562 VGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G +   L L ++M+ K     A  Y+ +I  L       EA ++L K++   S     T
Sbjct: 542 EGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVT 601

Query: 620 CHVLVES 626
              L+E+
Sbjct: 602 YDTLIEN 608



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 234/534 (43%), Gaps = 68/534 (12%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGI 172
           A++RS+   +++ +  Y    + R   +   Y +++         Q        M R G 
Sbjct: 186 AIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNG- 244

Query: 173 ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
            C P   +Y  L+ AY + G++  A  +L  M    + PNL+  N  I+ L     + +A
Sbjct: 245 -CLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEA 303

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
              LE M   G TP+ +TYN L+ GYC       A+ +  EM   G SP  V+Y  ++  
Sbjct: 304 WEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINS 363

Query: 291 LCKEKRIKEVRDLMEKM------VNDSNL------FHDQGRIEEAKELVNQMSQMGCIPD 338
           +CK + +    +  ++M       N+         F  QG + EA  ++N+M++ G  P 
Sbjct: 364 MCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPS 423

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           VVTY A ++G C +  +++A  ++Q+M   G  P+ VSY+  ++G C  G+   A +M  
Sbjct: 424 VVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQ 483

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
              E+  +P+A+TYS ++ GL    +L+EACD+ +EM+  G  P       LI + C EG
Sbjct: 484 EMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG 543

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFT----------------------------------- 483
            ++ A     E ++KG   + V ++                                   
Sbjct: 544 DLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYD 603

Query: 484 ---------------SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
                          +LI+GFC KG + EA  + + M      P    Y  II    + G
Sbjct: 604 TLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGG 663

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
            + +A  L  +M+  G VP  VT  T+I    + G  E++ +++   L  + CR
Sbjct: 664 NLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL--RSCR 715



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 136/310 (43%), Gaps = 27/310 (8%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  V++ M  +G+     ++S ++  + R G+L  A  +   M +  V+P+ +  ++ I 
Sbjct: 443 ALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQ 502

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    +L +A    + M   G+ P+  TY  LI  YC    +  A+ L DEM  KG  P
Sbjct: 503 GLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLP 562

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMV----------------NDSNL---------- 313
           D V+Y  ++  L K+ R +E + L+ K++                N SN+          
Sbjct: 563 DAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIK 622

Query: 314 -FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
            F  +G + EA  +   M +    P    Y  +++G CR G L +A  + ++M H G  P
Sbjct: 623 GFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVP 682

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           +TV+    +  L   G + E  E+I  +        A    V++    +EG +    +V+
Sbjct: 683 HTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVL 742

Query: 433 REMVKKGFFP 442
            +M K G  P
Sbjct: 743 TDMAKDGLLP 752


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 243/451 (53%), Gaps = 28/451 (6%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           A + L+  + R+GK R A  ++ +++ +   P+++  N  I       ++ KAL+ LERM
Sbjct: 144 ACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM 203

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
            +A   P+V+TYN +++  CD  ++K+A++++D    + C PD ++Y             
Sbjct: 204 SVA---PDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTI----------- 249

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                L+E   NDS        + +A +L+++M + GC PDVVTY  ++NG C+ G LD+
Sbjct: 250 -----LIEATCNDSG-------VGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDE 297

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A K L  M  +GC+PN +++   L  +C  G+ ++A  ++     +  +P+ +T++++++
Sbjct: 298 AIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILIN 357

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
            L R+  L  A DV+ +M K G  P  +  N L+   C+E KMD A ++++  +++GC  
Sbjct: 358 FLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 417

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           ++V + +L+   C+ G  + A+ +L+ +      P  +TY T+ID L+K G+ E A EL+
Sbjct: 418 DIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELL 477

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSF 595
            +M  KGL P ++TY T++      G+V++ +K+   M  LS +     YN ++  LC  
Sbjct: 478 EEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKA 537

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVES 626
                A   L  ++    K   +T  +L+E 
Sbjct: 538 QQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/459 (30%), Positives = 238/459 (51%), Gaps = 33/459 (7%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G+L   +  L  M      P+++ C + I       K  KA R +E ++ +G  P+V+
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN LI GYC    I  A+++++ M +   +PD V+Y T++  LC               
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERMSV---APDVVTYNTILRSLC--------------- 220

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                   D G+++EA E++++  Q  C PDV+TYT ++   C    + QA K+L +M  
Sbjct: 221 --------DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRK 272

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GCKP+ V+Y   +NG+C  G+  EA + +N        PN IT+++++  +   G+  +
Sbjct: 273 KGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMD 332

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++ +M++KG  P+ V  N+LI  LCR+  +  A   +++    GC  N +++  L+ 
Sbjct: 333 AERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLH 392

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFCQ+  ++ A+  L+ M      PD VTY T++ AL K+G+ + A E++ ++ SKG  P
Sbjct: 393 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSP 452

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            ++TY TVI    +VG+ E   +LLE+M  K  +     Y+ ++  L   G ++EA KI 
Sbjct: 453 VLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIF 512

Query: 606 GKVLRTASKADASTCHVLV-----ESYLNKGIPLLAYKV 639
             +   + K  A T + ++         ++ I  LAY V
Sbjct: 513 HDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMV 551



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 206/419 (49%), Gaps = 30/419 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D I Y +++    K+     A +VL  M+       P+  +Y  ++ +   +GKL+ AM 
Sbjct: 176 DVITYNVLIGGYCKSGEIDKALQVLERMS-----VAPDVVTYNTILRSLCDSGKLKEAME 230

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL    +    P+++     I      + + +A++ L+ M+  G  P+V+TYN LI G C
Sbjct: 231 VLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 290

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              R+ +AIK ++ MPL GC P+ +++  ++  +C                         
Sbjct: 291 KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMC-----------------------ST 327

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR  +A+ L+  M + GC P VVT+  ++N  CR   L +A  +L++M  HGC PN++SY
Sbjct: 328 GRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSY 387

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              L+G C   K   A E +         P+ +TY+ ++  L ++GK   A +++ ++  
Sbjct: 388 NPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSS 447

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P  +  N +I  L + GK + A + ++E   KG   +++ +++L+RG   +G ++E
Sbjct: 448 KGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDE 507

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           A+ +  DM      P  VTY  I+  L K  +   A + +  M+ KG  PT  TY  +I
Sbjct: 508 AIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 209/410 (50%), Gaps = 29/410 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVL-RLMARRGIECRPEAFSY--LMVAYSRAGKLRNAM 196
           D + Y  +L  L  +   + A  VL R M R   EC P+  +Y  L+ A      +  AM
Sbjct: 208 DVVTYNTILRSLCDSGKLKEAMEVLDRQMQR---ECYPDVITYTILIEATCNDSGVGQAM 264

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M+K    P+++  N  I+ +    +L +A++FL  M L G  PNV+T+N +++  
Sbjct: 265 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSM 324

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   R  DA +L+ +M  KGCSP  V++  ++ +LC+++ +    D++EK          
Sbjct: 325 CSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEK---------- 374

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
                        M + GC+P+ ++Y  +++GFC+  ++D+A + L+ M   GC P+ V+
Sbjct: 375 -------------MPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 421

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   L  LC +GK+  A E++N    +  +P  ITY+ V+ GL + GK   A +++ EM 
Sbjct: 422 YNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMR 481

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +KG  P  +  + L++ L  EGK+D A K   +        + V + +++ G C+     
Sbjct: 482 RKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTS 541

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            A+  L  M      P   TYT +I+ ++  G  EEA EL+ ++ S+G V
Sbjct: 542 RAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEALELLNELCSRGFV 591



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 131/262 (50%), Gaps = 16/262 (6%)

Query: 403 EWWTPNAITYS---------VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
           E  +PN +  S         + +  L R G+L E    +  M+ +G  P  +    LI+ 
Sbjct: 92  ESSSPNGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRG 151

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            CR GK   A + M+   N G   +V+ +  LI G+C+ G++++AL +L+ M +    PD
Sbjct: 152 FCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA---PD 208

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VTY TI+ +L  +G+++EA E++ + + +   P V+TY  +I   C    V   +KLL+
Sbjct: 209 VVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLD 268

Query: 574 KMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           +M  K+ C+     YN +I  +C  G L+EA K L  +     + +  T ++++ S  + 
Sbjct: 269 EM-RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCST 327

Query: 631 GIPLLAYKVACRMFNRNLIPDL 652
           G  + A ++   M  +   P +
Sbjct: 328 GRWMDAERLLADMLRKGCSPSV 349



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 1/186 (0%)

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           +R   + G+LEE L  L+ M      PD +  T++I    ++G+  +AT +M  + + G 
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGA 173

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
           VP V+TY  +I  YC+ G ++  L++LE+M       T YN ++ +LC  G L+EA ++L
Sbjct: 174 VPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVT-YNTILRSLCDSGKLKEAMEVL 232

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            + ++     D  T  +L+E+  N      A K+   M  +   PD+     +   +  E
Sbjct: 233 DRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 292

Query: 666 GKSEEA 671
           G+ +EA
Sbjct: 293 GRLDEA 298


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 146/456 (32%), Positives = 246/456 (53%), Gaps = 27/456 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           + H PI+  M     +      GA   LR M      C P   +Y  L+ A++RA KL  
Sbjct: 26  FTHTPIITAM-----ANAGDLDGAMDHLRSMG-----CDPNVVTYTALIAAFARAKKLEE 75

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           AM +L  M++    PNL+  N  +  L   + +  A   +++M   G  PNV+T+N L+ 
Sbjct: 76  AMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVD 135

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---- 310
           G+C    + DA KL+  M  KG  P+ V+Y  ++  LCK ++  E ++++E+M       
Sbjct: 136 GFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTP 195

Query: 311 -----SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                S L H      +IEEA++++ +M+  GC PDVV Y+++++ FC+ G+L +A+K L
Sbjct: 196 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTL 255

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW-WTPNAITYSVVMHGLRR 421
           Q+M      P+ V+Y   ++GLC  GK  EA+ +++  +E     P+ +TYS V++GL +
Sbjct: 256 QEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCK 315

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
              L EA  ++  M K G  P  V    +I  LC+ G+++ A+  +Q     GCA NVV 
Sbjct: 316 SDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVT 375

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +T+LI G C+   ++EA  ++++M      P+ VTY T+++ L  +GR++EA +L+ +M 
Sbjct: 376 YTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK 435

Query: 542 S--KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
                  P   TYRT+++       V++  +LLE+M
Sbjct: 436 DGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/459 (31%), Positives = 246/459 (53%), Gaps = 22/459 (4%)

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           AG L  A+ +L  M+ A  AP+       I  +     L  A+  L  M   G  PNV+T
Sbjct: 3   AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVT 59

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           Y  LI  +    ++++A+KL++EM  +GC P+ V+Y  ++  LCK   +   +D+++KM+
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 309 NDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                          + F  +G +++A++L+  M   G  P+VVTY+A+++G C+  +  
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +AK++L++M   G  P+  +Y+A ++GLC   K  EA +M+        TP+ + YS ++
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
           H   + GKL EA   ++EM K+   P  V  N +I  LC+ GK+  A+  + +    G  
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299

Query: 477 V-NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
           + +VV ++++I G C+   L EA  LLD M     +PD VTYTTIID L K GR+EEA  
Sbjct: 300 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEY 359

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENL 592
           L+  M   G  P VVTY T+I   C+  +V++  +++E+M     C      YN ++  L
Sbjct: 360 LLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM-RNAGCPPNLVTYNTMVNGL 418

Query: 593 CSFGYLEEAGKILGKVL--RTASKADASTCHVLVESYLN 629
           C  G ++EA +++ ++   R     DA+T   +V + ++
Sbjct: 419 CVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMS 457



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 232/480 (48%), Gaps = 36/480 (7%)

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L  AL  LE M+ AG  P+  T+  +I    +   +  A+  +  M   GC P+ V+Y  
Sbjct: 6   LHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTA 62

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++    + K++                       EEA +L+ +M + GC P++VTY  +V
Sbjct: 63  LIAAFARAKKL-----------------------EEAMKLLEEMRERGCPPNLVTYNVLV 99

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C++  +  A+ ++++M   G  PN +++ + ++G C  G   +AR+++     +   
Sbjct: 100 DALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMR 159

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN +TYS ++ GL +  K  EA +V+ EM   G  P     + LI  LC+  K++ A++ 
Sbjct: 160 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQM 219

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           ++     GC  +VV ++S+I  FC+ G L EA   L +M   +K PD VTY T+ID L K
Sbjct: 220 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 279

Query: 527 NGRVEEATELMMKMLSKG-LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--- 582
            G++ EA  ++ +M   G ++P VVTY TVI+  C+   + +  KLL++M  K  C    
Sbjct: 280 LGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM-CKAGCNPDV 338

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             Y  +I+ LC  G LEEA  +L  + R     +  T   L+           A +V   
Sbjct: 339 VTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEE 398

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE-RGHIQPKSEEHLQRQRVFLNS 701
           M N    P+L     +   L + G+ +EA  L+ R  + R    P +  +    R  +N+
Sbjct: 399 MRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATY----RTIVNA 454



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 143/304 (47%), Gaps = 5/304 (1%)

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C+ G    A E++   +   + P+A T++ ++  +   G L  A D +R M   G  P  
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V    LI +  R  K++ A K ++E   +GC  N+V +  L+   C+   +  A  ++  
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      P+ +T+ +++D   K G V++A +L+  M++KG+ P VVTY  +I   C+  +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 565 VEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
             +  ++LE+M +      A  Y+ +I  LC    +EEA ++L ++  +    D      
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++ ++   G  L A K    M  +   PD+     V + L   GK  EA  ++ +  E G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 683 HIQP 686
            + P
Sbjct: 298 DVLP 301


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 255/499 (51%), Gaps = 18/499 (3%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           K+  A+ +   M   A+ P+++     I  L    ++ +A    E  +  G  P V+TYN
Sbjct: 10  KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYN 69

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
            +I G C   RI++A+ L D+M +  G  P  V+Y T++  LC++  + +   L+E+M  
Sbjct: 70  TMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAG 129

Query: 310 DS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                         N    QGR +EA  L+ QM+  GC P+++T+  ++ G C+ GE++ 
Sbjct: 130 RGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEA 189

Query: 358 AKKMLQQMY--HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           A +++ +M+    G  P+ +++ + L+GLC   + L+A  +   + E    PN +TYS +
Sbjct: 190 AFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTL 249

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + GL +  K+ EA  ++ +MV+ G     V  + ++  L + G+M+ A   +++  + GC
Sbjct: 250 IDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGC 309

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             + V + +LI GF ++  L EA+ LL +M      P  VTYTT+   L ++GR +EA E
Sbjct: 310 LPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVE 369

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENL 592
           ++  M ++G  P  +TY +++   C+ GRV + L   EKM   +       AY+ +I+ L
Sbjct: 370 ILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGL 429

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G ++EA + L +++R     D  T  +L+    + G      ++   M  R  +PD+
Sbjct: 430 CKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDM 489

Query: 653 KLCKKVSERLILEGKSEEA 671
                + +RL    + +EA
Sbjct: 490 VTYATLVDRLCRASRVDEA 508



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 142/451 (31%), Positives = 229/451 (50%), Gaps = 19/451 (4%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGK 191
            + +R   + Y  +++ L +        ++L  MA RG  C P A +Y  L+ A    G+
Sbjct: 94  HFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRG--CAPNAVTYNTLVNALLGQGR 151

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL--AGITPNVLTY 249
            + A  +L  M      P L+     I  L    ++  A R ++ M +  +G++P+V+T+
Sbjct: 152 SKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITF 211

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N ++ G C   RI DA  +      +GC P+ V+Y T++  L K  ++ E   L+ KMV 
Sbjct: 212 NSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE 271

Query: 310 DS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                         +     GR+E+A  ++ QM   GC+PD VTY  +++GF +   L +
Sbjct: 272 LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLRE 331

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  +L++M   G  P+ V+YT   +GLC +G+  EA E+++        PNAITYS ++ 
Sbjct: 332 AVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVD 391

Query: 418 GLRREGKLSEACDVVREMVKKGFF-PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
           GL + G+++EA     +M +     P  +  + LI  LC+ GK+D A +F++  +  G  
Sbjct: 392 GLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRI 451

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            +VV F+ LI G C  G ++  L L   M      PD VTY T++D L +  RV+EA +L
Sbjct: 452 PDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDL 511

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
             +M S GL P   T RT+IH   +V R ED
Sbjct: 512 FQQMRSDGLSPDRSTRRTMIHGLLEVNRDED 542



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 236/449 (52%), Gaps = 19/449 (4%)

Query: 175 RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           RP   +Y  L+    R  ++     +L  M     APN +  NT ++ L+   +  +A  
Sbjct: 98  RPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFS 157

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL--KGCSPDKVSYYTVMGY 290
            LE+M   G  P ++T+  +IKG C    I+ A +++DEM +   G SPD +++ +V+  
Sbjct: 158 LLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDG 217

Query: 291 LCKEKRIKEVRDLMEK---------MVNDSNL---FHDQGRIEEAKELVNQMSQMGCIPD 338
           LCKE+RI +  ++ ++         +V  S L        +++EA +L+ +M ++GC  +
Sbjct: 218 LCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRAN 277

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            VTY+ VV+G  +VG ++ A  +L+QM   GC P+ V+Y   ++G     +  EA  ++ 
Sbjct: 278 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 337

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
              E  + P+ +TY+ + HGL R G+  EA +++  M  +G  P  +  + ++  LC+ G
Sbjct: 338 EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAG 397

Query: 459 KMDGAKKFMQE-CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           ++  A  + ++   ++  A +V+ +++LI G C+ G ++EA   L+ M    + PD VT+
Sbjct: 398 RVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTF 457

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           + +I+ L   GR++   EL   M  +G VP +VTY T++ R C+  RV++   L ++M S
Sbjct: 458 SILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRS 517

Query: 578 K--QKCRTAYNQVIENLCSFGYLEEAGKI 604
                 R+    +I  L      E+A +I
Sbjct: 518 DGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 180/368 (48%), Gaps = 28/368 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D I +  +L+ L K +    A  V +    RG  CRP   +Y  L+   S+  K+  A+ 
Sbjct: 207 DVITFNSVLDGLCKEQRILDAHNVFKRALERG--CRPNVVTYSTLIDGLSKMAKMDEALQ 264

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L+ M +     N +  +T +  L+   ++  A+  L +M+ AG  P+ +TYN LI G+ 
Sbjct: 265 LLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFF 324

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              R+++A+ L+ EM   G  P  V+Y T+   LC+                        
Sbjct: 325 KRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR-----------------------S 361

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH-HGCKPNTVS 376
           GR +EA E+++ M+  GC P+ +TY+++V+G C+ G + +A    ++M       P+ ++
Sbjct: 362 GRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIA 421

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y+A ++GLC  GK  EA E +         P+ +T+S++++GL   G++    ++ R M 
Sbjct: 422 YSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMA 481

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           ++G  P  V    L+  LCR  ++D A    Q+  + G + +     ++I G  +    E
Sbjct: 482 ERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDE 541

Query: 497 EALSLLDD 504
           +A  + D+
Sbjct: 542 DAKRIQDE 549



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 172/344 (50%), Gaps = 7/344 (2%)

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++G C+  ++D+A  + +QM      P+ V+Y A ++GL    +  EA ++   +  + 
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREM-VKKGFFPTPVEINLLIQSLCREGKMDGA 463
             P  +TY+ ++ GL + G++  A  +  +M +  GF PT V  + LI  LCR+ ++D  
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            K ++E   +GCA N V + +L+     +G  +EA SLL+ M      P+ +T+  II  
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 524 LSKNGRVEEATELM--MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           L K G +E A  ++  M M+  GL P V+T+ +V+   C+  R+ D   + ++ L +  C
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER-GC 239

Query: 582 R---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
           R     Y+ +I+ L     ++EA ++L K++    +A+  T   +V+  L  G    A  
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 299

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           V  +M +   +PD      + +      +  EA  L+   +E G
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 343


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 252/487 (51%), Gaps = 38/487 (7%)

Query: 215 NTAIHVLVVGNKLAKALR-FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           N  +  L      A+AL  F   M   G+ P ++TYN +I G C  + +   ++L +E+ 
Sbjct: 5   NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQM 333
            +G  PD V+Y T++  LCK                        G +EEA+ L   MS  
Sbjct: 65  ERGHHPDVVTYNTLIDSLCK-----------------------AGDLEEARRLHGDMSSR 101

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK--PNTVSYTAFLNGLCHNGKSL 391
           GC+P+VVTY+ ++NG C+VG +D+A++++Q+M    C   PN ++Y +FL+GLC    + 
Sbjct: 102 GCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTA 161

Query: 392 EAREMINTSEEEWW--TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
           EA E++ +  +     +P+ +T+S ++ GL + G++ EAC V  +M+  G+ P  +  N 
Sbjct: 162 EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNA 221

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL-- 507
           L+  LC+  KM+ A   ++  ++KG   +V+ ++ L+  FC+   ++EAL LL  M    
Sbjct: 222 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 281

Query: 508 CKKD---PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           C  +   PD VT+  +I    K G  E+A+ L  +M++K L P V+T+  +I   C+ G+
Sbjct: 282 CTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 341

Query: 565 VE---DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           VE   D+L L+  +       T YN ++  LC  G +EEA + L +++ +    D+ T  
Sbjct: 342 VEAARDILDLMGNLGVPPNVVT-YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYG 400

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
            LV +         A ++   + +    PD      + + L   GK+E+A T++   V +
Sbjct: 401 SLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGK 460

Query: 682 GHIQPKS 688
           GH QP S
Sbjct: 461 GH-QPDS 466



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 256/524 (48%), Gaps = 24/524 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVL-SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           ++ ++ +  RAG    A+ +    M +  VAP ++  NT I+ L   N L   +   E +
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G  P+V+TYN LI   C    +++A +L  +M  +GC P+ V+Y  ++  LCK  RI
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 298 KEVRDLMEKMVNDS----------NLFHD----QGRIEEAKELVNQM--SQMGCIPDVVT 341
            E R+L+++M   S          N F D    Q    EA EL+  +    +   PD VT
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           ++ +++G C+ G++D+A  +   M   G  PN ++Y A +NGLC   K   A  MI +  
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG-----FFPTPVEINLLIQSLCR 456
           ++  TP+ ITYSV++    +  ++ EA +++  M  +G       P  V  N+LI   C+
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            G  + A    +E + K    +V+ F +LI G C+ G +E A  +LD M      P+ VT
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE--K 574
           Y  ++  L K+GR+EEA + + +M+S G VP  +TY ++++  C+  R +D L+L+   K
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423

Query: 575 MLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
                     YN +++ L   G  E+A  +L +++    + D+ T           G   
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLA 483

Query: 635 LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
              ++   +  + ++PD   C  + + +   GK ++   ++  F
Sbjct: 484 GTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEF 527



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 238/462 (51%), Gaps = 25/462 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           +  D + Y  +++ L K    + A+R+   M+ RG  C P   +Y  L+    + G++  
Sbjct: 68  HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRG--CVPNVVTYSVLINGLCKVGRIDE 125

Query: 195 AMYVLSMMQKAA--VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG--ITPNVLTYN 250
           A  ++  M + +  V PN++  N+ +  L   +  A+A   +  ++     ++P+ +T++
Sbjct: 126 ARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFS 185

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI G C   +I +A  + D+M   G  P+ ++Y  ++  LCK  +++    ++E MV+ 
Sbjct: 186 TLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK 245

Query: 311 S------------NLFHDQGRIEEAKELVNQMSQMGC-----IPDVVTYTAVVNGFCRVG 353
                        + F    R++EA EL++ M+  GC     +PD VT+  ++ G C+ G
Sbjct: 246 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAG 305

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
             +QA  + ++M     +P+ +++ A ++GLC  G+   AR++++        PN +TY+
Sbjct: 306 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 365

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++HGL + G++ EAC  + EMV  G  P  +    L+ +LCR  + D A + + E  + 
Sbjct: 366 ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 425

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   + V +  L+ G  + G  E+A+++L++M      PD+ T+      L ++G +   
Sbjct: 426 GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGT 485

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            EL+  +L+KG++P   T  +++   C+ G+++D+  ++++ 
Sbjct: 486 MELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEF 527



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 178/376 (47%), Gaps = 28/376 (7%)

Query: 132 DRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGK 191
           D   R   D + +  +++ L K      A  V   M   G       ++ L+    +A K
Sbjct: 172 DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADK 231

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL---- 247
           +  A  ++  M    V P+++  +  +      +++ +AL  L  M   G TPNVL    
Sbjct: 232 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDK 291

Query: 248 -TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
            T+N LI G C     + A  L +EM  K   PD +++  ++  LCK             
Sbjct: 292 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK------------- 338

Query: 307 MVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                      G++E A+++++ M  +G  P+VVTY A+V+G C+ G +++A + L++M 
Sbjct: 339 ----------AGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV 388

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             GC P++++Y + +  LC   ++ +A ++++  +   W P+ +TY++++ GL + GK  
Sbjct: 389 SSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTE 448

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A  V+ EMV KG  P           L R G + G  + ++  L KG   +    +S++
Sbjct: 449 QAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 508

Query: 487 RGFCQKGDLEEALSLL 502
              C+ G L++  +++
Sbjct: 509 DWVCRSGKLDDVKAMI 524


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 255/494 (51%), Gaps = 26/494 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR-AGKLRNA 195
           +  DP V+ +  ++L +  +   A+++   M   G+    ++ +  +   S     ++ A
Sbjct: 178 WGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIA 237

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + V     +  V  N    N   H L    ++ +A + L +M+L G  P+V++Y+ +I G
Sbjct: 238 LKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVING 297

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           YC +  ++  +KLI+EM +KG  P+  +Y  V+  LCK                      
Sbjct: 298 YCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCK---------------------- 335

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G++ EA+ ++ +M   G  PD V YT +++GFC++G +  A ++  +M      P+ +
Sbjct: 336 -TGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFI 394

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +YTA + GLC  G+ +EA ++ +    +   P+ +TY+ ++ G  +EGK+ EA  +  +M
Sbjct: 395 TYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM 454

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           ++ G  P  V    L   LC+ G++D A + + E   KG  +N+  + SL+ G C+ G++
Sbjct: 455 LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNI 514

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           ++A+ L+ DM +    PD VTYTT++DA  K+  +  A EL+ +ML + L PTVVT+  +
Sbjct: 515 DQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVL 574

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           ++ +C  G +ED  KLL+ ML K      T YN +I+  C    +    +I   +     
Sbjct: 575 MNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGV 634

Query: 614 KADASTCHVLVESY 627
             D +T ++L++ +
Sbjct: 635 VPDGNTYNILIKGH 648



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 220/432 (50%), Gaps = 20/432 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A ++L  M  RG  C P+  SY  V   Y + G+L+  + ++  MQ   + PN    N  
Sbjct: 272 AHQLLLQMELRG--CIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGV 329

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I +L    K+A+A R L  M   GI P+ + Y  LI G+C L  +  A +L DEM  +  
Sbjct: 330 ILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKI 389

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
           SPD ++Y  V+  LC+  R+ E   L  +MV               + +  +G+++EA  
Sbjct: 390 SPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFS 449

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L NQM QMG  P++VTYTA+ +G C+ GE+D A ++L +M   G + N  +Y + +NGLC
Sbjct: 450 LHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLC 509

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   +A +++   E   + P+A+TY+ +M    +  ++  A +++R+M+ +   PT V
Sbjct: 510 KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVV 569

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N+L+   C  G ++  +K ++  L KG   N   + SLI+ +C + ++     +   M
Sbjct: 570 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 629

Query: 506 YLCKKD--PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
             C K   PD  TY  +I    K   ++EA  L   M+ KG   TV +Y  +I  + +  
Sbjct: 630 --CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRK 687

Query: 564 RVEDLLKLLEKM 575
           +  +  +L E+M
Sbjct: 688 KFLEARELFEQM 699



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 206/410 (50%), Gaps = 16/410 (3%)

Query: 297 IKEVRDLMEKMVN-------DS-NLF-----HDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           + E R L +KM+N       DS NLF      D   I+ A ++  +  ++G   +  +Y 
Sbjct: 198 LDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYN 257

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            + +  C++G + +A ++L QM   GC P+ +SY+  +NG C  G+     ++I   + +
Sbjct: 258 IITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIK 317

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              PN  TY+ V+  L + GK++EA  V+REM+ +G  P  V    LI   C+ G +  A
Sbjct: 318 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 377

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            +   E   +  + + + +T++I G CQ G + EA  L  +M   + +PD VTYT +ID 
Sbjct: 378 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 437

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKC 581
             K G+++EA  L  +ML  GL P +VTY  +    C+ G V+   +LL +M  K  +  
Sbjct: 438 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 497

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              YN ++  LC  G +++A K++  +       DA T   L+++Y      + A+++  
Sbjct: 498 IYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLR 557

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
           +M +R L P +     +     + G  E+ + L+   +E+G I P +  +
Sbjct: 558 QMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG-IMPNATTY 606



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/315 (20%), Positives = 131/315 (41%), Gaps = 12/315 (3%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R   D + Y  +++   K    + A  +   M + G+      ++ L     + G++  A
Sbjct: 423 RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTA 482

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +L  M +  +  N+   N+ ++ L     + +A++ ++ M++AG  P+ +TY  L+  
Sbjct: 483 NELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 542

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-- 313
           YC    +  A +L+ +M  +   P  V++  +M   C    +++   L++ M+    +  
Sbjct: 543 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 602

Query: 314 ----------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                     +  +  +    E+   M   G +PD  TY  ++ G C+   + +A  + +
Sbjct: 603 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHR 662

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M   G      SY A + G     K LEARE+      E    +   Y++       EG
Sbjct: 663 DMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEG 722

Query: 424 KLSEACDVVREMVKK 438
           K+    ++  E ++K
Sbjct: 723 KMELTLELCDEAIEK 737



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 12/217 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  D + Y  +++   K++    A  +LR M  R ++     F+ LM  +  +G L +  
Sbjct: 529 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 588

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M +  + PN    N+ I    + N +         M   G+ P+  TYN LIKG+
Sbjct: 589 KLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGH 648

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
           C    +K+A  L  +M  KG +    SY  ++    K K+  E R+L E+M  +      
Sbjct: 649 CKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADR 708

Query: 312 ---NLF----HDQGRIEEAKELVNQMSQMGCIPDVVT 341
              N+F    +D+G++E   EL ++  +   + D+ T
Sbjct: 709 EIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 745


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 264/505 (52%), Gaps = 24/505 (4%)

Query: 132 DRQWRYRHDPIVYYM--MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           DR       P VY    ++  L +      A RVLR   R G      A++ L+  Y R 
Sbjct: 67  DRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRY 126

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G+L  A  +++ M    VAP+       I  L    ++ +AL  L+ M   G  P+V+TY
Sbjct: 127 GQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTY 183

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-- 307
             L++  C       A++++DEM  KGC+P+ V+Y  ++  +C+E R+ + R+ + ++  
Sbjct: 184 TVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS 243

Query: 308 -------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                  V+ + +        R E+ +EL  +M +  C+P+ VT+  +V  FCR G +++
Sbjct: 244 YGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 303

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A ++L+QM  HGC  NT      +N +C  G+  +A + +N       +P+ I+Y+ V+ 
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 363

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           GL R  +  +A ++++EMV+K   P  V  N  I  LC++G ++ A   +++    GC V
Sbjct: 364 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           N+V + +L+ GFC +G ++ AL L   M  CK  P+T+TYTT++  L    R++ A EL+
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSMP-CK--PNTITYTTLLTGLCNAERLDAAAELL 480

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCS 594
            +ML K   P VVT+  ++  +CQ G +++ ++L+E+M+ +  C      YN +++ + +
Sbjct: 481 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM-EHGCTPNLITYNTLLDGITN 539

Query: 595 FGYLEEAGKILGKVLRTASKADAST 619
               EEA ++L  ++      D  T
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVT 564



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 240/487 (49%), Gaps = 21/487 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +L  M  RG  C+P   +Y  L+ A  ++     AM VL  M+     PN++  N  
Sbjct: 164 ALSLLDDMLHRG--CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 221

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I+ +    ++  A  FL R+   G  P+ ++Y  ++KG C   R +D  +L  EM  K C
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
            P++V++  ++ + C+   ++    ++E+M                N    QGR+++A +
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQ 341

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
            +N M   GC PD ++YT V+ G CR    + AK++L++M    C PN V++  F+  LC
Sbjct: 342 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 401

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   +A  +I    E     N +TY+ +++G   +G++  A ++   M  K   P  +
Sbjct: 402 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTI 458

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               L+  LC   ++D A + + E L K CA NVV F  L+  FCQKG ++EA+ L++ M
Sbjct: 459 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P+ +TY T++D ++ +   EEA EL+  ++S G+ P +VTY ++I    +  RV
Sbjct: 519 MEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 578

Query: 566 EDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           E+ +K+   +  L  +     YN+++  LC     + A      ++      +  T   L
Sbjct: 579 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 638

Query: 624 VESYLNK 630
           +E   N+
Sbjct: 639 IEGLANE 645



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/535 (26%), Positives = 267/535 (49%), Gaps = 32/535 (5%)

Query: 150 ILSKTKLCQGAKRVLRLMARRGIECRPEAF--SYLMVAYSRAGKLRNAMYVLSMMQKAAV 207
           ++++  L + A+ V R  +R      P+ +  + L+    R G+  +A  VL   +++  
Sbjct: 53  LIARDDLAEAARLVDRATSRGEA---PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
           A ++   NT +       +L  A R +  M +A   P+  TY  +I+G CD  R+ +A+ 
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALS 166

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELV 327
           L+D+M  +GC P  V+Y  ++  +CK     +                       A E++
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ-----------------------AMEVL 203

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           ++M   GC P++VTY  ++NG CR G +D A++ L ++  +G +P+TVSYT  L GLC  
Sbjct: 204 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 263

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            +  +  E+     E+   PN +T+ +++    R G +  A  V+ +M   G        
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 323

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N++I ++C++G++D A +F+    + GC+ + +++T++++G C+    E+A  LL +M  
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ VT+ T I  L + G +E+AT L+ +M   G    +VTY  +++ +C  GRV+ 
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443

Query: 568 LLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            L+L   M  K    T Y  ++  LC+   L+ A ++L ++L+     +  T +VLV  +
Sbjct: 444 ALELFYSMPCKPNTIT-YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             KG+   A ++  +M      P+L     + + +  +  SEEA  L+   V  G
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNG 557



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 206/427 (48%), Gaps = 19/427 (4%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA--YSRAGK 191
            + ++ D + Y  +L+ L   K  +  + +   M  +   C P   ++ M+   + R G 
Sbjct: 243 SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK--NCMPNEVTFDMLVRFFCRGGM 300

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +  A+ VL  M     A N  +CN  I+ +    ++  A +FL  M   G +P+ ++Y  
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           ++KG C   R +DA +L+ EM  K C P++V++ T +  LC++  I++   L+E+M    
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                       N F  QGR++ A EL      M C P+ +TYT ++ G C    LD A 
Sbjct: 421 CEVNIVTYNALVNGFCVQGRVDSALEL---FYSMPCKPNTITYTTLLTGLCNAERLDAAA 477

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++L +M    C PN V++   ++  C  G   EA E++    E   TPN ITY+ ++ G+
Sbjct: 478 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 537

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
             +    EA +++  +V  G  P  V  + +I  L RE +++ A K      + G     
Sbjct: 538 TNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKA 597

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           V +  ++   C++ + + A+     M      P+ +TY T+I+ L+    ++E  +L+ +
Sbjct: 598 VIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRE 657

Query: 540 MLSKGLV 546
           + S+G++
Sbjct: 658 LCSRGVL 664



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 113/298 (37%), Gaps = 69/298 (23%)

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
           +P   N  ++ L     +  A + +    ++G A +V   T LIR  C++G   +A  +L
Sbjct: 42  SPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVL 101

Query: 503 D---------DMY--------LCKKD---------------PDTVTYTTIIDALSKNGRV 530
                     D++         C+                 PD  TYT II  L   GRV
Sbjct: 102 RAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRV 161

Query: 531 EEATELMMKML-----------------------------------SKGLVPTVVTYRTV 555
            EA  L+  ML                                   +KG  P +VTY  +
Sbjct: 162 GEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 221

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I+  C+ GRV+D  + L ++ S   Q    +Y  V++ LC+    E+  ++  +++    
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
             +  T  +LV  +   G+   A +V  +M       +  LC  V   +  +G+ ++A
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 339



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 2/203 (0%)

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           +R    + DL EA  L+D      + PD    T +I  L + GR  +A  ++      G 
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
              V  Y T++  YC+ G+++   +L+  M       T Y  +I  LC  G + EA  +L
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYT-YTPIIRGLCDRGRVGEALSLL 168

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
             +L    +    T  VL+E+         A +V   M  +   P++     +   +  E
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228

Query: 666 GKSEEADTLMLRFVERGHIQPKS 688
           G+ ++A   + R    G  QP +
Sbjct: 229 GRVDDAREFLNRLSSYG-FQPDT 250


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 149/489 (30%), Positives = 243/489 (49%), Gaps = 30/489 (6%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY---VL 199
           V+ ++++  S+  L   A  ++ L    G    P   SY  V  +     RN  +   V 
Sbjct: 136 VFDLVVKSYSRLCLIDKALSIVHLSQAHGF--MPGVLSYNAVLDATIRSKRNISFAENVF 193

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M ++ V+PN+   N  I    +   L  ALRF +RM+  G  PNV+TYN LI GYC L
Sbjct: 194 KEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKL 253

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            +I D  +L+  M LKG  P+ +SY  V+  LC+E R+KE+  ++               
Sbjct: 254 RKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVL--------------- 298

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                    +M++ G   D VTY  ++ G+C+ G   QA  M  +M  HG  P+ ++YT+
Sbjct: 299 --------TEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTS 350

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++ +C  G    A E ++        PN  TY+ ++ G  ++G ++EA  V++EM+  G
Sbjct: 351 LIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNG 410

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           F P+ V  N LI   C  GKM  A   +++   KG   +VV++++++ GFC+  D++EAL
Sbjct: 411 FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEAL 470

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +   M      PDT+TY+++I    +  R +EA +L  +ML  GL P   TY  +I+ Y
Sbjct: 471 RVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAY 530

Query: 560 CQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C  G ++  ++L  +M+ K        Y+ +I  L       EA ++L K+    S    
Sbjct: 531 CMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSD 590

Query: 618 STCHVLVES 626
            T H L+E+
Sbjct: 591 VTYHTLIEN 599



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 211/442 (47%), Gaps = 36/442 (8%)

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           ++ ++K Y  L  I  A+ ++      G  P  +SY  V+    + KR            
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKR------------ 184

Query: 309 NDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                      I  A+ +  +M Q    P+V TY  ++ GFC  G LD A +   +M   
Sbjct: 185 ----------NISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKK 234

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           GC PN V+Y   ++G C   K  +  E++ +   +   PN I+Y+VV++GL REG++ E 
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEI 294

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             V+ EM K+G+    V  N LI+  C+EG    A     E L  G + +V+ +TSLI  
Sbjct: 295 SFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHS 354

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C+ G++  A   LD M +    P+  TYTT++D  S+ G + EA  ++ +M+  G  P+
Sbjct: 355 MCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPS 414

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT----AYNQVIENLCSFGYLEEAGKI 604
           VVTY  +I+ +C  G++ D + +LE M  K+K  T    +Y+ V+   C    ++EA ++
Sbjct: 415 VVTYNALINGHCIAGKMVDAIAVLEDM--KEKGLTPDVVSYSTVLSGFCRSYDVDEALRV 472

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR----NLIPDLKLCKKVSE 660
             K++    K D  T   L++ +  +       K AC +F+      L PD      +  
Sbjct: 473 KRKMVAKGIKPDTITYSSLIQGFCEQR----RTKEACDLFDEMLRVGLPPDEFTYTALIN 528

Query: 661 RLILEGKSEEADTLMLRFVERG 682
              +EG  ++A  L    VE+G
Sbjct: 529 AYCMEGDLQKAIQLHNEMVEKG 550



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 141/550 (25%), Positives = 243/550 (44%), Gaps = 45/550 (8%)

Query: 123 VALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
           VAL+FF   DR  +    P  + Y  +++   K +       +LR MA +G+E    +++
Sbjct: 223 VALRFF---DRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYN 279

Query: 181 YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
            ++    R G+++   +VL+ M K   + + +  NT I          +AL     M   
Sbjct: 280 VVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G++P+V+TY  LI   C    +  A + +D+M ++G  P++ +Y T++            
Sbjct: 340 GLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLV------------ 387

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                      + F  +G + EA  ++ +M   G  P VVTY A++NG C  G++  A  
Sbjct: 388 -----------DGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIA 436

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L+ M   G  P+ VSY+  L+G C +    EA  +      +   P+ ITYS ++ G  
Sbjct: 437 VLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFC 496

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
            + +  EACD+  EM++ G  P       LI + C EG +  A +   E + KG   +VV
Sbjct: 497 EQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVV 556

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK-------------- 526
            ++ LI G  ++    EA  LL  ++  +  P  VTY T+I+  S               
Sbjct: 557 TYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616

Query: 527 -NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY 585
             G + EA ++   ML K   P    Y  +IH +C+ G +     L ++M+         
Sbjct: 617 MKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTV 676

Query: 586 NQV--IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
             +  ++ L   G + E   ++  VLR+   ++A    VLVE    +G   +   V   M
Sbjct: 677 TVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEM 736

Query: 644 FNRNLIPDLK 653
                +P+ K
Sbjct: 737 AKDGFLPNGK 746


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 158/601 (26%), Positives = 271/601 (45%), Gaps = 80/601 (13%)

Query: 110 QICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR 169
            +  VLR + D   +L++F        ++H  + Y  M++ L +     G   +L+ M  
Sbjct: 43  HVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKL 102

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
             + C  E F +++  Y R+      + +   +++    P++ I N  +  L+  N    
Sbjct: 103 ENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKM 162

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
                  M+  G+ PNV TYN L+K  C   ++  A KL+ EM  KGC PD VSY TV+ 
Sbjct: 163 INALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVIS 222

Query: 290 YL------------------------------CKEKRIKEVRDLMEKMVN---DSNL--- 313
            +                              CKE R KE  DLM +MV+   D N+   
Sbjct: 223 SMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISY 282

Query: 314 ------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                   D G +E +  +  +M   GC P+V T+T+++ GF   G +  A  +   M  
Sbjct: 283 STVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIR 342

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN V+Y   ++GLC +G   EA  + N  E++   PN  TYS +++G  + G L  
Sbjct: 343 EGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVS 402

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           AC+   +M+  G  P  V    ++  LC+    D A   +   ++ GC   V+ F + I+
Sbjct: 403 ACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIK 462

Query: 488 GFCQKGDLEEALSLLDDM--YLC---------------------------------KKDP 512
           G C+ G +E A+++LD M  Y C                                 K + 
Sbjct: 463 GLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEF 522

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D VTY TI+   S NG  ++  +L+ KML  G+    +T  T ++ YC++G+V+  +K+L
Sbjct: 523 DCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVL 582

Query: 573 EKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
           + + ++++ R     +  ++  +C++   EEA   L ++L+     + +T +VLV  + +
Sbjct: 583 DNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFS 642

Query: 630 K 630
           K
Sbjct: 643 K 643



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 174/406 (42%), Gaps = 65/406 (16%)

Query: 140 DP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP--EAFSYLMVAYSRAGKLRNA 195
           DP  I Y  ++  LS     + +  V   M  RG  CRP  + F+ L+  +   G++ +A
Sbjct: 276 DPNVISYSTVISCLSDMGNVELSLAVFGRMFVRG--CRPNVQTFTSLIKGFFVRGRVGDA 333

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + + ++M +  V+PN++  NT IH L     + +A+    +M+   I PNV TY+ +I G
Sbjct: 334 VGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYG 393

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           +     +  A +  ++M   GC P+ V Y  ++  LC+     +  DL++ M++D     
Sbjct: 394 FAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISD----- 448

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
                             GC P V+T+   + G CR G ++ A  +L QM  + C PN  
Sbjct: 449 ------------------GCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIR 490

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y   L+GL       EA  +I   EE     + +TY+ +M+G    G   +   ++ +M
Sbjct: 491 TYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKM 550

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKK------------------------------ 465
           +  G     + +N  + + C+ GK+  A K                              
Sbjct: 551 LVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLG 610

Query: 466 ------FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
                 ++ E L +G   N+  +  L+RGF  K      + +LDD+
Sbjct: 611 TEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGPIRILDDI 656



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 145/299 (48%), Gaps = 7/299 (2%)

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           +Q  KM  ++   GC+P+   Y   L+ L           + N  + E   PN  TY+V+
Sbjct: 126 EQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVL 185

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +  L + GK+  AC ++ EM  KG  P  V    +I S+C+ G +D A++   +      
Sbjct: 186 LKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKF----- 240

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
              V  + +LI G C++   +EA  L+++M     DP+ ++Y+T+I  LS  G VE +  
Sbjct: 241 EPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLA 300

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
           +  +M  +G  P V T+ ++I  +   GRV D + L   M+ +       AYN +I  LC
Sbjct: 301 VFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLC 360

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           S G ++EA  +  ++ + + + + +T   ++  +   G  + A +   +M N    P++
Sbjct: 361 SDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNV 419



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 17/176 (9%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           L  L R+   R+ C ++R   + +V                D + Y  ++   S   + Q
Sbjct: 496 LDGLFRANAFREACGLIRELEERKVEF--------------DCVTYNTIMYGFSFNGMHQ 541

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
              ++L  M   GI+      +  + AY + GK++ A+ VL  +         +I +T I
Sbjct: 542 QVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTII 601

Query: 219 HVLVVGNKLA--KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
            +  + N L   +A+ +L  M   GI PN+ T+N L++G+         I+++D++
Sbjct: 602 -LWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGPIRILDDI 656


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 263/505 (52%), Gaps = 24/505 (4%)

Query: 132 DRQWRYRHDPIVYYM--MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           DR       P VY    ++  L +      A RVLR   R G      A++ L+  Y R 
Sbjct: 67  DRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRY 126

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G+L  A  +++ M    VAP+       I  L    ++ +AL  L+ M   G  P+V+TY
Sbjct: 127 GQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTY 183

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-- 307
             L++  C       A++++DEM  KGC+P+ V+Y  ++  +C+E R+ + R+ + ++  
Sbjct: 184 TVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS 243

Query: 308 -------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                  V+ + +        R E+ +EL  +M +  C+P+ VT+  +V  FCR G +++
Sbjct: 244 YGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 303

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A ++L+QM  HGC  NT      +N +C  G+  +A + +N       +P+ I+Y+ V+ 
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 363

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           GL R  +  +A ++++EMV+K   P  V  N  I  LC++G ++ A   +++    GC V
Sbjct: 364 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           N+V + +L+ GFC +G ++ AL L   M  CK  P+T+TYTT++  L    R++ A EL+
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSMP-CK--PNTITYTTLLTGLCNAERLDAAAELL 480

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCS 594
            +ML K   P VVT+  ++  +CQ G +++ ++L+E+M+ +  C      YN +++ +  
Sbjct: 481 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM-EHGCTPNLITYNTLLDGITK 539

Query: 595 FGYLEEAGKILGKVLRTASKADAST 619
               EEA ++L  ++      D  T
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVT 564



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 241/487 (49%), Gaps = 21/487 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +L  M  RG  C+P   +Y  L+ A  ++     AM VL  M+     PN++  N  
Sbjct: 164 ALSLLDDMLHRG--CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 221

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I+ +    ++  A  FL R+   G  P+ ++Y  ++KG C   R +D  +L  EM  K C
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
            P++V++  ++ + C+   ++    ++E+M                N    QGR+++A +
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQ 341

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
            +N M   GC PD ++YT V+ G CR    + AK++L++M    C PN V++  F+  LC
Sbjct: 342 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 401

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   +A  +I    E     N +TY+ +++G   +G++  A ++   M  K   P  +
Sbjct: 402 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTI 458

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               L+  LC   ++D A + + E L K CA NVV F  L+  FCQKG ++EA+ L++ M
Sbjct: 459 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P+ +TY T++D ++K+   EEA EL+  ++S G+ P +VTY ++I    +  RV
Sbjct: 519 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 578

Query: 566 EDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           E+ +K+   +  L  +     YN+++  LC     + A      ++      +  T   L
Sbjct: 579 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 638

Query: 624 VESYLNK 630
           +E   N+
Sbjct: 639 IEGLANE 645



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/535 (26%), Positives = 267/535 (49%), Gaps = 32/535 (5%)

Query: 150 ILSKTKLCQGAKRVLRLMARRGIECRPEAF--SYLMVAYSRAGKLRNAMYVLSMMQKAAV 207
           ++++  L + A+ V R  +R      P+ +  + L+    R G+  +A  VL   +++  
Sbjct: 53  LIARDDLAEAARLVDRATSRGEA---PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
           A ++   NT +       +L  A R +  M +A   P+  TY  +I+G CD  R+ +A+ 
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALS 166

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELV 327
           L+D+M  +GC P  V+Y  ++  +CK     +                       A E++
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ-----------------------AMEVL 203

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           ++M   GC P++VTY  ++NG CR G +D A++ L ++  +G +P+TVSYT  L GLC  
Sbjct: 204 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 263

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            +  +  E+     E+   PN +T+ +++    R G +  A  V+ +M   G        
Sbjct: 264 KRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLC 323

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N++I ++C++G++D A +F+    + GC+ + +++T++++G C+    E+A  LL +M  
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ VT+ T I  L + G +E+AT L+ +M   G    +VTY  +++ +C  GRV+ 
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDS 443

Query: 568 LLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            L+L   M  K    T Y  ++  LC+   L+ A ++L ++L+     +  T +VLV  +
Sbjct: 444 ALELFYSMPCKPNTIT-YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             KG+   A ++  +M      P+L     + + +  +  SEEA  L+   V  G
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 557



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 207/427 (48%), Gaps = 19/427 (4%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA--YSRAGK 191
            + ++ D + Y  +L+ L   K  +  + +   M  +   C P   ++ M+   + R G 
Sbjct: 243 SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK--NCMPNEVTFDMLVRFFCRGGM 300

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +  A+ VL  M     A N  +CN  I+ +    ++  A +FL  M   G +P+ ++Y  
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           ++KG C   R +DA +L+ EM  K C P++V++ T +  LC++  I++   L+E+M    
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                       N F  QGR++ A EL      M C P+ +TYT ++ G C    LD A 
Sbjct: 421 CEVNIVTYNALVNGFCVQGRVDSALEL---FYSMPCKPNTITYTTLLTGLCNAERLDAAA 477

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++L +M    C PN V++   ++  C  G   EA E++    E   TPN ITY+ ++ G+
Sbjct: 478 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 537

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            ++    EA +++  +V  G  P  V  + +I  L RE +++ A K      + G     
Sbjct: 538 TKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKA 597

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           V +  ++   C++ + + A+     M      P+ +TY T+I+ L+    ++E  +L+ +
Sbjct: 598 VIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRE 657

Query: 540 MLSKGLV 546
           + S+G++
Sbjct: 658 LCSRGVL 664



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 113/298 (37%), Gaps = 69/298 (23%)

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
           +P   N  ++ L     +  A + +    ++G A +V   T LIR  C++G   +A  +L
Sbjct: 42  SPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVL 101

Query: 503 D---------DMY--------LCKKD---------------PDTVTYTTIIDALSKNGRV 530
                     D++         C+                 PD  TYT II  L   GRV
Sbjct: 102 RAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRV 161

Query: 531 EEATELMMKML-----------------------------------SKGLVPTVVTYRTV 555
            EA  L+  ML                                   +KG  P +VTY  +
Sbjct: 162 GEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 221

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I+  C+ GRV+D  + L ++ S   Q    +Y  V++ LC+    E+  ++  +++    
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
             +  T  +LV  +   G+   A +V  +M       +  LC  V   +  +G+ ++A
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 339



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 2/203 (0%)

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           +R    + DL EA  L+D      + PD    T +I  L + GR  +A  ++      G 
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
              V  Y T++  YC+ G+++   +L+  M       T Y  +I  LC  G + EA  +L
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYT-YTPIIRGLCDRGRVGEALSLL 168

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
             +L    +    T  VL+E+         A +V   M  +   P++     +   +  E
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228

Query: 666 GKSEEADTLMLRFVERGHIQPKS 688
           G+ ++A   + R    G  QP +
Sbjct: 229 GRVDDAREFLNRLSSYG-FQPDT 250


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 165/556 (29%), Positives = 265/556 (47%), Gaps = 15/556 (2%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y ++   L + K    AK     M + G++    A S L+  + R G +   + +  +M
Sbjct: 211 TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM 270

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
               +  NL+  N  IH L    K+ KA   L+ M   G  PN  T+  LI+GYC  H +
Sbjct: 271 VSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNM 330

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNL 313
             A++L+DEM  +   P  VSY  ++  LC  K +     L+EKM         V  S L
Sbjct: 331 GRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL 390

Query: 314 ---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
              +  +GRIEEA+ L++ MS  G  PD+  Y A+++   + G++++A   L ++   G 
Sbjct: 391 IMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 450

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           KP+ V++ AF+ G    GK  EA +  +   +    PN   Y+V+++G  + G L EA  
Sbjct: 451 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 510

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           + R +   G  P     +  I  L + G++  A K   E   KG   +V  ++SLI GFC
Sbjct: 511 IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 570

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           ++G++E+A  L D+M L    P+   Y  ++D L K+G ++ A +L   M  KGL P  V
Sbjct: 571 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 630

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
           TY T+I  YC+   V +   L  +M SK  Q     YN ++   C  G +E+A  +  ++
Sbjct: 631 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 690

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
           L+    A   + + L++ Y        A ++   M  + ++PD      V +     GK 
Sbjct: 691 LQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKM 749

Query: 669 EEADTLMLRFVERGHI 684
           EEA+ L     ER  I
Sbjct: 750 EEANLLFKEMQERNLI 765



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 159/587 (27%), Positives = 279/587 (47%), Gaps = 50/587 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  M+  L   K    A ++L  M   G++     +S L++ Y+  G++  A  +L  
Sbjct: 350 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDG 409

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M  + VAP++   N  I  L    K+ +A  +L  +Q  G+ P+ +T+   I GY    +
Sbjct: 410 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 469

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VND----SN 312
           + +A K  DEM   G  P+   Y  ++    K   + E   +   +     + D    S 
Sbjct: 470 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSA 529

Query: 313 LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             H     GR++EA ++ +++ + G +PDV TY+++++GFC+ GE+++A ++  +M   G
Sbjct: 530 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 589

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PN   Y A ++GLC +G    AR++ +   E+   P+++TYS ++ G  +   ++EA 
Sbjct: 590 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 649

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            +  EM  KG  P     N L+   C+EG M+ A    +E L KG A   ++F +LI G+
Sbjct: 650 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGY 708

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+   ++EA  L  +M   +  PD VTYTT+ID   K G++EEA  L  +M  + L+   
Sbjct: 709 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDT 768

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--------------QKCR------------- 582
           VTY ++++ Y ++G+  ++  L EKM++K                C+             
Sbjct: 769 VTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 828

Query: 583 ----------TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
                     T ++ +I  LC    L EA K+L ++     K   + C  LV S+   G 
Sbjct: 829 VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGK 888

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
              A +V   + +  L+PD      +    + +  SE+A  L+ + V
Sbjct: 889 MDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 162/631 (25%), Positives = 277/631 (43%), Gaps = 57/631 (9%)

Query: 106 LKPRQICAVLRSQ--ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
           L P  I AVL      D +  L FFYW+  Q         + ++   L  ++L   A  V
Sbjct: 67  LNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGV 126

Query: 164 LRLMARRGIECR-----------------PEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           L  M R                       P  F  L+ +Y R G L  A  V  + +  +
Sbjct: 127 LTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDS 186

Query: 207 VAPNLLICNT------------AIHVLVVGNKLAKALRF------LERMQLAGITPNVLT 248
           +  +L+ CN+                 ++   L +A R        E MQ  G+ P+   
Sbjct: 187 ILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNA 246

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
            + LI G+     I + +++ D M   G   + ++Y  ++  LCK  ++++  ++++ M+
Sbjct: 247 CSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMI 306

Query: 309 N-----DSNLF----------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
                 +S  F          H+ GR   A EL+++M +   +P  V+Y A++NG C   
Sbjct: 307 TLGCKPNSRTFCLLIEGYCREHNMGR---ALELLDEMEKRNLVPSAVSYGAMINGLCHCK 363

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           +L  A K+L++M   G KPN V Y+  + G    G+  EAR +++        P+   Y+
Sbjct: 364 DLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYN 423

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++  L + GK+ EA   + E+  +G  P  V     I    + GKM  A K+  E L+ 
Sbjct: 424 AIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDH 483

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   N   +T LI G  + G+L EALS+   ++     PD  T +  I  L KNGRV+EA
Sbjct: 484 GLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEA 543

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIEN 591
            ++  ++  KGLVP V TY ++I  +C+ G VE   +L ++M  K        YN +++ 
Sbjct: 544 LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 603

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC  G ++ A K+   +     + D+ T   +++ Y        A+ +   M ++ + P 
Sbjct: 604 LCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 663

Query: 652 LKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             +   +      EG  E+A  L    +++G
Sbjct: 664 SFVYNALVHGCCKEGDMEKAMNLFREMLQKG 694



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 234/504 (46%), Gaps = 27/504 (5%)

Query: 129 YWADRQWR-YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS 187
           Y  + Q R  + D + +   +   SKT     A +    M   G+      ++ L+  + 
Sbjct: 441 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 500

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           +AG L  A+ +   +    V P++  C+  IH L+   ++ +AL+    ++  G+ P+V 
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 560

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TY+ LI G+C    ++ A +L DEM LKG +P+   Y  ++  LCK              
Sbjct: 561 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK-------------- 606

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     G I+ A++L + M + G  PD VTY+ +++G+C+   + +A  +  +M  
Sbjct: 607 ---------SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 657

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G +P++  Y A ++G C  G   +A  +     ++ +    ++++ ++ G  +  K+ E
Sbjct: 658 KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQE 716

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  + +EM+ K   P  V    +I   C+ GKM+ A    +E   +   V+ V +TSL+ 
Sbjct: 717 ASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMY 776

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G+ + G   E  +L + M      PD VTY  +I A  K   + EA +L  +++ KG++ 
Sbjct: 777 GYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLT 836

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
               +  +I   C+   + +  KLL++M  L  +    A + ++ +    G ++EA ++ 
Sbjct: 837 KGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVF 896

Query: 606 GKVLRTASKADASTCHVLVESYLN 629
             V       D +T   LV   LN
Sbjct: 897 EGVKSLGLVPDTTTLIDLVNGNLN 920


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 263/505 (52%), Gaps = 24/505 (4%)

Query: 132 DRQWRYRHDPIVYYM--MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           DR       P VY    ++  L +      A RVLR   R G      A++ L+  Y R 
Sbjct: 98  DRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRY 157

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G+L  A  +++ M    VAP+       I  L    ++ +AL  L+ M   G  P+V+TY
Sbjct: 158 GQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTY 214

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-- 307
             L++  C       A++++DEM  KGC+P+ V+Y  ++  +C+E R+ + R+ + ++  
Sbjct: 215 TVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS 274

Query: 308 -------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                  V+ + +        R E+ +EL  +M +  C+P+ VT+  +V  FCR G +++
Sbjct: 275 YGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 334

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A ++L+QM  HGC  NT      +N +C  G+  +A + +N       +P+ I+Y+ V+ 
Sbjct: 335 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 394

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           GL R  +  +A ++++EMV+K   P  V  N  I  LC++G ++ A   +++    GC V
Sbjct: 395 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 454

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           N+V + +L+ GFC +G ++ AL L   M  CK  P+T+TYTT++  L    R++ A EL+
Sbjct: 455 NIVTYNALVNGFCVQGRVDSALELFYSMP-CK--PNTITYTTLLTGLCNAERLDAAAELL 511

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCS 594
            +ML K   P VVT+  ++  +CQ G +++ ++L+E+M+ +  C      YN +++ +  
Sbjct: 512 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM-EHGCTPNLITYNTLLDGITK 570

Query: 595 FGYLEEAGKILGKVLRTASKADAST 619
               EEA ++L  ++      D  T
Sbjct: 571 DCNSEEALELLHGLVSNGVSPDIVT 595



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 241/487 (49%), Gaps = 21/487 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +L  M  RG  C+P   +Y  L+ A  ++     AM VL  M+     PN++  N  
Sbjct: 195 ALSLLDDMLHRG--CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 252

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I+ +    ++  A  FL R+   G  P+ ++Y  ++KG C   R +D  +L  EM  K C
Sbjct: 253 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 312

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
            P++V++  ++ + C+   ++    ++E+M                N    QGR+++A +
Sbjct: 313 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQ 372

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
            +N M   GC PD ++YT V+ G CR    + AK++L++M    C PN V++  F+  LC
Sbjct: 373 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 432

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   +A  +I    E     N +TY+ +++G   +G++  A ++   M  K   P  +
Sbjct: 433 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTI 489

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               L+  LC   ++D A + + E L K CA NVV F  L+  FCQKG ++EA+ L++ M
Sbjct: 490 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 549

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P+ +TY T++D ++K+   EEA EL+  ++S G+ P +VTY ++I    +  RV
Sbjct: 550 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 609

Query: 566 EDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           E+ +K+   +  L  +     YN+++  LC     + A      ++      +  T   L
Sbjct: 610 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 669

Query: 624 VESYLNK 630
           +E   N+
Sbjct: 670 IEGLANE 676



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 249/495 (50%), Gaps = 27/495 (5%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G+  +A  VL   +++  A ++   NT +       +L  A R +  M +A   P+  
Sbjct: 121 RRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAY 177

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TY  +I+G CD  R+ +A+ L+D+M  +GC P  V+Y  ++  +CK     +        
Sbjct: 178 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ-------- 229

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                          A E++++M   GC P++VTY  ++NG CR G +D A++ L ++  
Sbjct: 230 ---------------AMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS 274

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +G +P+TVSYT  L GLC   +  +  E+     E+   PN +T+ +++    R G +  
Sbjct: 275 YGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 334

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  V+ +M   G        N++I ++C++G++D A +F+    + GC+ + +++T++++
Sbjct: 335 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 394

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C+    E+A  LL +M      P+ VT+ T I  L + G +E+AT L+ +M   G   
Sbjct: 395 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 454

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGK 607
            +VTY  +++ +C  GRV+  L+L   M  K    T Y  ++  LC+   L+ A ++L +
Sbjct: 455 NIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTIT-YTTLLTGLCNAERLDAAAELLAE 513

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +L+     +  T +VLV  +  KG+   A ++  +M      P+L     + + +  +  
Sbjct: 514 MLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCN 573

Query: 668 SEEADTLMLRFVERG 682
           SEEA  L+   V  G
Sbjct: 574 SEEALELLHGLVSNG 588



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 207/427 (48%), Gaps = 19/427 (4%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA--YSRAGK 191
            + ++ D + Y  +L+ L   K  +  + +   M  +   C P   ++ M+   + R G 
Sbjct: 274 SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK--NCMPNEVTFDMLVRFFCRGGM 331

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +  A+ VL  M     A N  +CN  I+ +    ++  A +FL  M   G +P+ ++Y  
Sbjct: 332 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 391

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           ++KG C   R +DA +L+ EM  K C P++V++ T +  LC++  I++   L+E+M    
Sbjct: 392 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 451

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                       N F  QGR++ A EL   M    C P+ +TYT ++ G C    LD A 
Sbjct: 452 CEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAA 508

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++L +M    C PN V++   ++  C  G   EA E++    E   TPN ITY+ ++ G+
Sbjct: 509 ELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 568

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            ++    EA +++  +V  G  P  V  + +I  L RE +++ A K      + G     
Sbjct: 569 TKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKA 628

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           V +  ++   C++ + + A+     M      P+ +TY T+I+ L+    ++E  +L+ +
Sbjct: 629 VIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRE 688

Query: 540 MLSKGLV 546
           + S+G++
Sbjct: 689 LCSRGVL 695



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 149/289 (51%), Gaps = 7/289 (2%)

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A  LV++ +  G  PDV   T ++   CR G    A ++L+     G   +  +Y   + 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           G C  G+   AR +I +       P+A TY+ ++ GL   G++ EA  ++ +M+ +G  P
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
           + V   +L++++C+      A + + E   KGC  N+V +  +I G C++G +++A   L
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           + +      PDTV+YTT++  L    R E+  EL  +M+ K  +P  VT+  ++  +C+ 
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 329

Query: 563 GRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKV 608
           G VE  +++LE+M S   C    T  N VI  +C  G +++A + L  +
Sbjct: 330 GMVERAIQVLEQM-SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 377



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 140/284 (49%), Gaps = 5/284 (1%)

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
           S  A  +++ +      P+    + ++  L R G+ S+A  V+R   + G        N 
Sbjct: 90  SPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 149

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L+   CR G++D A++ +    +   A +   +T +IRG C +G + EALSLLDDM    
Sbjct: 150 LVAGYCRYGQLDAARRLIA---SMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 206

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P  VTYT +++A+ K+    +A E++ +M +KG  P +VTY  +I+  C+ GRV+D  
Sbjct: 207 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 266

Query: 570 KLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           + L ++ S   Q    +Y  V++ LC+    E+  ++  +++      +  T  +LV  +
Sbjct: 267 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
              G+   A +V  +M       +  LC  V   +  +G+ ++A
Sbjct: 327 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 370


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 163/618 (26%), Positives = 291/618 (47%), Gaps = 40/618 (6%)

Query: 108 PRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGA----KR 162
           P     VL S +   R+AL+ F WA+ Q  +R    V+  +LEIL++  L + A    +R
Sbjct: 81  PDLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMER 140

Query: 163 VLRLMARRGI----------ECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
           V+     R +          E   +    L+  YS+   +   + V   M K+ ++P++ 
Sbjct: 141 VINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVK 200

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
            CN  + +L   + ++KA+     M   GI P ++TYN L+  YC   +++  + L+ EM
Sbjct: 201 NCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM 260

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRI 320
             +GC+P+ V+Y  ++  L K+   ++ + L+ +M+                 + ++G +
Sbjct: 261 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGML 320

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            EA  L  +M   G  P V TY + + G C++G +  A + L  M  +   P+ VSY   
Sbjct: 321 AEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL 380

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           + G C  G  ++A  + +     +  P  +TY+ ++ GL R+G+L  A  +  EM+ +G 
Sbjct: 381 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  V   +L+   C+ G +  A++F  E L++G  ++   + + I G  + GD   A S
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFS 500

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L ++M      PD + Y  ++D L K G +EEA+EL+ KM+S G++P  VTY ++IH + 
Sbjct: 501 LQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHL 560

Query: 561 QVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           + GR+    ++  +MLSK        Y  +I      G LE A     ++       +  
Sbjct: 561 ENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVI 620

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE-----GKSEEADT 673
           T + L+           AY     M  + + P+     K S  +++      G  +EA +
Sbjct: 621 TYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPN-----KYSYTILINENCNMGNWQEALS 675

Query: 674 LMLRFVERGHIQPKSEEH 691
           L  + ++RG +QP S  H
Sbjct: 676 LYKQMLDRG-VQPDSCTH 692



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 227/512 (44%), Gaps = 85/512 (16%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L IL    L   A  V R M   GI+     ++ L+ +Y + GK++  + +LS MQ+  
Sbjct: 205 ILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG 264

Query: 207 VAPNLLICNTAIHVL-----------VVG----------------------NK--LAKAL 231
            APN +  N  I+ L           ++G                      NK  LA+AL
Sbjct: 265 CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEAL 324

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
              E M L G +P V TYN  I G C L R+ DA++ + +M      PD VSY T++   
Sbjct: 325 SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGY 384

Query: 292 CKEKRI-------KEVRD--LMEKMVNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDV 339
           C+   +        E+R   L   +V  + L      QG +E A++L  +M   G  PD+
Sbjct: 385 CRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDI 444

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK---------------------------- 371
           VTYT +VNG C++G L  A++   +M H G +                            
Sbjct: 445 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 504

Query: 372 -------PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
                  P+ + Y   ++GLC  G   EA E++     +   P+ +TY+ ++H     G+
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L +  ++  EM+ KG  P+ V   +LI     +G+++ A  +  E   KG   NV+ + S
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G C+   +++A +   +M      P+  +YT +I+     G  +EA  L  +ML +G
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684

Query: 545 LVPTVVTYRTVIHRY---CQVGRVEDLLKLLE 573
           + P   T+  ++ +    C++  V  L  LL+
Sbjct: 685 VQPDSCTHSALLKQLGKDCKLQAVRQLESLLD 716



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 207/442 (46%), Gaps = 47/442 (10%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y +++  LSK    + AK ++  M + G++     ++ L+  Y   G L  A+ +   
Sbjct: 270 VTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEE 329

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M     +P +   N+ I+ L    +++ A++ L  M    + P+V++YN LI GYC L  
Sbjct: 330 MVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGN 389

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND----------- 310
           +  A  L DE+      P  V+Y T++  LC++  ++  + L  +M+N+           
Sbjct: 390 LMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTI 449

Query: 311 -------------SNLFHDQ-----------------------GRIEEAKELVNQMSQMG 334
                        +  F D+                       G    A  L  +M   G
Sbjct: 450 LVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG 509

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             PD++ Y  VV+G C++G L++A ++LQ+M   G  P+ V+YT+ ++    NG+  + R
Sbjct: 510 FPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGR 569

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E+      +  TP+ +TY+V++HG   +G+L  A     EM +KG  P  +  N LI  L
Sbjct: 570 EIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGL 629

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+  +MD A  F  E + KG   N  ++T LI   C  G+ +EALSL   M      PD+
Sbjct: 630 CKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDS 689

Query: 515 VTYTTIIDALSKNGRVEEATEL 536
            T++ ++  L K+ +++   +L
Sbjct: 690 CTHSALLKQLGKDCKLQAVRQL 711


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 254/529 (48%), Gaps = 45/529 (8%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY---VL 199
           V+ ++++  S+  L   A  ++ L    G    P   SY  V  +     RN  +   V 
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGF--MPGVLSYNAVLDATIRSKRNISFAENVF 193

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M ++ V+PN+   N  I        +  AL   ++M+  G  PNV+TYN LI GYC L
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            +I D  KL+  M LKG  P+ +SY  V+  LC+E R+KEV  ++               
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL--------------- 298

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                    +M++ G   D VTY  ++ G+C+ G   QA  M  +M  HG  P+ ++YT+
Sbjct: 299 --------TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++ +C  G    A E ++        PN  TY+ ++ G  ++G ++EA  V+REM   G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           F P+ V  N LI   C  GKM+ A   +++   KG + +VV++++++ GFC+  D++EAL
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +  +M      PDT+TY+++I    +  R +EA +L  +ML  GL P   TY  +I+ Y
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530

Query: 560 CQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C  G +E  L+L  +M+ K        Y+ +I  L       EA ++L K+    S    
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590

Query: 618 STCHVLVESYLN---------------KGIPLLAYKVACRMFNRNLIPD 651
            T H L+E+  N               KG+   A +V   M  +N  PD
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 136/531 (25%), Positives = 241/531 (45%), Gaps = 48/531 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++   K +      ++LR MA +G+E    +++ ++    R G+++   +VL+ 
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +   + + +  NT I          +AL     M   G+TP+V+TY  LI   C    
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +  A++ +D+M ++G  P++ +Y T++                       + F  +G + 
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLV-----------------------DGFSQKGYMN 397

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA  ++ +M+  G  P VVTY A++NG C  G+++ A  +L+ M   G  P+ VSY+  L
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457

Query: 382 NGLCHNGKSLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +G C +    EA    REM+    E+   P+ ITYS ++ G   + +  EACD+  EM++
Sbjct: 458 SGFCRSYDVDEALRVKREMV----EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G  P       LI + C EG ++ A +   E + KG   +VV ++ LI G  ++    E
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSK---------------NGRVEEATELMMKMLS 542
           A  LL  ++  +  P  VTY T+I+  S                 G + EA ++   ML 
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLG 633

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV--IENLCSFGYLEE 600
           K   P    Y  +IH +C+ G +     L ++M+           +  ++ L   G + E
Sbjct: 634 KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              ++  VLR+   ++A    VLVE    +G   +   V   M     +P+
Sbjct: 694 LNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 205/436 (47%), Gaps = 24/436 (5%)

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           ++ ++K Y  L  I  A+ ++      G  P  +SY  V+    + KR            
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR------------ 184

Query: 309 NDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                      I  A+ +  +M +    P+V TY  ++ GFC  G +D A  +  +M   
Sbjct: 185 ----------NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETK 234

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           GC PN V+Y   ++G C   K  +  +++ +   +   PN I+Y+VV++GL REG++ E 
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             V+ EM ++G+    V  N LI+  C+EG    A     E L  G   +V+ +TSLI  
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C+ G++  A+  LD M +    P+  TYTT++D  S+ G + EA  ++ +M   G  P+
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILG 606
           VVTY  +I+ +C  G++ED + +LE M  K       +Y+ V+   C    ++EA ++  
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
           +++    K D  T   L++ +  +     A  +   M    L PD      +     +EG
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534

Query: 667 KSEEADTLMLRFVERG 682
             E+A  L    VE+G
Sbjct: 535 DLEKALQLHNEMVEKG 550



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 165/362 (45%), Gaps = 14/362 (3%)

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE-A 393
           C      +  VV  + R+  +D+A  ++     HG  P  +SY A L+    + +++  A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
             +     E   +PN  TY++++ G    G +  A  +  +M  KG  P  V  N LI  
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C+  K+D   K ++    KG   N++++  +I G C++G ++E   +L +M       D
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VTY T+I    K G   +A  +  +ML  GL P+V+TY ++IH  C+ G +   ++ L+
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369

Query: 574 KMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +M  +  C     Y  +++     GY+ EA ++L ++          T + L+  +   G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG-----KSEEADTLMLRFVERGHIQP 686
               A  V   M  + L PD+     VS   +L G       +EA  +    VE+G I+P
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDV-----VSYSTVLSGFCRSYDVDEALRVKREMVEKG-IKP 483

Query: 687 KS 688
            +
Sbjct: 484 DT 485



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/402 (22%), Positives = 175/402 (43%), Gaps = 62/402 (15%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  ++  + K      A   L  M  RG+      ++ L+  +S+ G +  A  VL  
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M     +P+++  N  I+   V  K+  A+  LE M+  G++P+V++Y+ ++ G+C  + 
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
           + +A+++  EM  KG  PD ++Y +++   C+++R KE  DL E+M+             
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG--------------------- 348
             N +  +G +E+A +L N+M + G +PDVVTY+ ++NG                     
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585

Query: 349 -----------------------------FCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                                        FC  G + +A ++ + M     KP+  +Y  
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G C  G   +A  +     +  +  + +T   ++  L +EGK++E   V+  +++  
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSC 705

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
                 +  +L++   REG MD     + E    G   N ++
Sbjct: 706 ELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 133/306 (43%), Gaps = 8/306 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +L    ++     A RV R M  +GI+     +S L+  +    + + A  + 
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  + P+       I+   +   L KAL+    M   G+ P+V+TY+ LI G    
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R ++A +L+ ++  +   P  V+Y+T++   C     K V  L++        F  +G 
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVSLIKG-------FCMKGM 620

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           + EA ++   M      PD   Y  +++G CR G++ +A  + ++M   G   +TV+  A
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA 680

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +  L   GK  E   +I           A    V++    REG +    DV+ EM K G
Sbjct: 681 LVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740

Query: 440 FFPTPV 445
           F P  +
Sbjct: 741 FLPNGI 746


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/536 (29%), Positives = 265/536 (49%), Gaps = 32/536 (5%)

Query: 117 SQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP 176
           +Q +  ++ Q F    +   Y+     +Y ++E  + ++      +VL  M R G   R 
Sbjct: 41  AQNELSISPQIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREG---RV 97

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC-------NTAIHVLVVGNKLAK 229
              +  ++ +   GK       ++   + A   N L C       N+ ++V++     + 
Sbjct: 98  LTETIFILIFKACGKAHLPGEAVNFFHRMA---NDLHCKQTVKSFNSVLNVIIQEGDFSY 154

Query: 230 ALRFLERMQLA---GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           A +F   +  A   G  PN+LTYN +IK  C L +I  A+    EMPLK C+PD  +Y T
Sbjct: 155 AFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYST 214

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMG 334
           +M  LCKE+R+ E   L+++M  +  L                G +  A +LV+ M   G
Sbjct: 215 LMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKG 274

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C+P+ VTY  +++G C  G+LD+A  +L++M    C PN V+Y   +NGL    ++ +  
Sbjct: 275 CVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGV 334

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            ++ + EE     N   YS ++ GL +EGK   A  + +EM +KG  P  V     I  L
Sbjct: 335 HILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGL 394

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CR+ K D A+  +QE L+KG   N   ++SL++GF +KGD ++A+ +  +M       + 
Sbjct: 395 CRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNV 454

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           V  + +++ L ++GR+ EA  +   ML +GL P VV Y ++I   C VG V+  LKL  +
Sbjct: 455 VCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYE 514

Query: 575 MLSKQ-KCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           M  ++ K R     YN +   LC    L  A  +L  +L      D+ TC++ +E+
Sbjct: 515 MQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLET 570



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 240/503 (47%), Gaps = 51/503 (10%)

Query: 111 ICAVLRSQADERVALQFFY--WADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA 168
           +  V+  + D   A +F+   +      ++ + + Y ++++ L K      A    R M 
Sbjct: 142 VLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMP 201

Query: 169 RRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
            +   C P+ F+Y  LM    +  ++  A+++L  MQ     PN +  N  I  L     
Sbjct: 202 LKN--CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGD 259

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L++A + ++ M L G  PN +TYN LI G C   ++  A+ L+++M    C P++V+Y T
Sbjct: 260 LSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGT 319

Query: 287 VMGYLCKEKRIKEVRDLMEKM------VND-------SNLFHDQGRIEEAKELVNQMSQM 333
           ++  L K++R ++   ++  M       N+       S LF  +G+ E A  L  +M++ 
Sbjct: 320 IINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFK-EGKSENAVRLWKEMAEK 378

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           GC P+VV Y A ++G CR  + D+A+ +LQ+M   G  PN  +Y++ + G    G S +A
Sbjct: 379 GCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKA 438

Query: 394 ----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
               +EM++         N +  SV+++GL   G+L EA  V   M+ +G  P  V  + 
Sbjct: 439 ILVWKEMMSQDMRH----NVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSS 494

Query: 450 LIQSLCREGKMD-GAKKFMQ-ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           +I+ LC  G +D G K F + +C       +VV +  L    C++ +L  A+ LL+ M  
Sbjct: 495 MIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLD 554

Query: 508 CKKDPDTVTYTTIIDAL------SKNGRVE---------------EATELMMKMLSKGLV 546
              DPD++T    ++ L       ++GR+                 A  ++ +ML + L 
Sbjct: 555 EGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLP 614

Query: 547 PTVVTYRTVIHRYCQVGRVEDLL 569
           P   T+  VI R C+  R+ + +
Sbjct: 615 PEPSTWSRVIQRTCKPKRIRETI 637



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 182/380 (47%), Gaps = 11/380 (2%)

Query: 313 LFHDQGRIEEAKELVNQMSQMG----CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY-- 366
           +F   G+     E VN   +M     C   V ++ +V+N   + G+   A K    ++  
Sbjct: 106 IFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGA 165

Query: 367 -HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G +PN ++Y   +  LC  G+   A +       +   P+  TYS +M+GL +E ++
Sbjct: 166 NSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRV 225

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA  ++ EM  +G  P PV  N+LI +L + G +  A K +     KGC  N V + +L
Sbjct: 226 DEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTL 285

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G C KG L++ALSLL+ M   K  P+ VTY TII+ L K  R E+   ++M M  +G 
Sbjct: 286 IHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ 345

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAG 602
                 Y ++I    + G+ E+ ++L ++M +++ C+     Y   I+ LC     +EA 
Sbjct: 346 KANEYIYSSLISGLFKEGKSENAVRLWKEM-AEKGCKPNVVVYGAFIDGLCRDEKPDEAE 404

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
            IL ++L      +A T   L++ +  KG    A  V   M ++++  ++  C  +   L
Sbjct: 405 DILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGL 464

Query: 663 ILEGKSEEADTLMLRFVERG 682
              G+  EA T+    +  G
Sbjct: 465 CESGRLREALTVWTHMLGEG 484



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 31/343 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K +  +    +L  M  RG +     +S L+    + GK  NA+ +   
Sbjct: 315 VTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKE 374

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +    PN+++    I  L    K  +A   L+ M   G  PN  TY+ L+KG+     
Sbjct: 375 MAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGD 434

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SN 312
            + AI +  EM  +    + V    ++  LC+  R++E   +   M+ +         S+
Sbjct: 435 SQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSS 494

Query: 313 LFH---DQGRIEEAKELVNQMS--QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +     D G +++  +L  +M   +    PDVVTY  + N  CR   L +A  +L  M  
Sbjct: 495 MIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLD 554

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P++++   FL  L         RE IN  ++           +V+  L+RE KLS 
Sbjct: 555 EGCDPDSLTCNIFLETL---------RERINPPQDG----RLFLDELVVRLLKRERKLS- 600

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           A  +V EM+ +   P P   + +IQ  C+  ++   ++ + EC
Sbjct: 601 ALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRI---RETIDEC 640


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/536 (29%), Positives = 265/536 (49%), Gaps = 32/536 (5%)

Query: 117 SQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP 176
           +Q +  ++ Q F    +   Y+     +Y ++E  + ++      +VL  M R G   R 
Sbjct: 65  AQNELSISPQIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREG---RV 121

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC-------NTAIHVLVVGNKLAK 229
              +  ++ +   GK       ++   + A   N L C       N+ ++V++     + 
Sbjct: 122 LTETIFILIFKACGKAHLPGEAVNFFHRMA---NDLHCKQTVKSFNSVLNVIIQEGDFSY 178

Query: 230 ALRFLERMQLA---GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           A +F   +  A   G  PN+LTYN +IK  C L +I  A+    EMPLK C+PD  +Y T
Sbjct: 179 AFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYST 238

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMG 334
           +M  LCKE+R+ E   L+++M  +  L                G +  A +LV+ M   G
Sbjct: 239 LMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKG 298

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C+P+ VTY  +++G C  G+LD+A  +L++M    C PN V+Y   +NGL    ++ +  
Sbjct: 299 CVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGV 358

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            ++ + EE     N   YS ++ GL +EGK   A  + +EM +KG  P  V     I  L
Sbjct: 359 HILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGL 418

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CR+ K D A+  +QE L+KG   N   ++SL++GF +KGD ++A+ +  +M       + 
Sbjct: 419 CRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNV 478

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           V  + +++ L ++GR+ EA  +   ML +GL P VV Y ++I   C VG V+  LKL  +
Sbjct: 479 VCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYE 538

Query: 575 MLSKQ-KCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           M  ++ K R     YN +   LC    L  A  +L  +L      D+ TC++ +E+
Sbjct: 539 MQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLET 594



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 240/504 (47%), Gaps = 51/504 (10%)

Query: 110 QICAVLRSQADERVALQFFY--WADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLM 167
            +  V+  + D   A +F+   +      ++ + + Y ++++ L K      A    R M
Sbjct: 165 SVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREM 224

Query: 168 ARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
             +   C P+ F+Y  LM    +  ++  A+++L  MQ     PN +  N  I  L    
Sbjct: 225 PLKN--CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNG 282

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
            L++A + ++ M L G  PN +TYN LI G C   ++  A+ L+++M    C P++V+Y 
Sbjct: 283 DLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYG 342

Query: 286 TVMGYLCKEKRIKEVRDLMEKM------VND-------SNLFHDQGRIEEAKELVNQMSQ 332
           T++  L K++R ++   ++  M       N+       S LF  +G+ E A  L  +M++
Sbjct: 343 TIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFK-EGKSENAVRLWKEMAE 401

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            GC P+VV Y A ++G CR  + D+A+ +LQ+M   G  PN  +Y++ + G    G S +
Sbjct: 402 KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQK 461

Query: 393 A----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           A    +EM++         N +  SV+++GL   G+L EA  V   M+ +G  P  V  +
Sbjct: 462 AILVWKEMMSQDMRH----NVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYS 517

Query: 449 LLIQSLCREGKMD-GAKKFMQ-ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            +I+ LC  G +D G K F + +C       +VV +  L    C++ +L  A+ LL+ M 
Sbjct: 518 SMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSML 577

Query: 507 LCKKDPDTVTYTTIIDAL------SKNGRVE---------------EATELMMKMLSKGL 545
               DPD++T    ++ L       ++GR+                 A  ++ +ML + L
Sbjct: 578 DEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFL 637

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLL 569
            P   T+  VI R C+  R+ + +
Sbjct: 638 PPEPSTWSRVIQRTCKPKRIRETI 661



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 182/380 (47%), Gaps = 11/380 (2%)

Query: 313 LFHDQGRIEEAKELVNQMSQMG----CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY-- 366
           +F   G+     E VN   +M     C   V ++ +V+N   + G+   A K    ++  
Sbjct: 130 IFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGA 189

Query: 367 -HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G +PN ++Y   +  LC  G+   A +       +   P+  TYS +M+GL +E ++
Sbjct: 190 NSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRV 249

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA  ++ EM  +G  P PV  N+LI +L + G +  A K +     KGC  N V + +L
Sbjct: 250 DEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTL 309

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G C KG L++ALSLL+ M   K  P+ VTY TII+ L K  R E+   ++M M  +G 
Sbjct: 310 IHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ 369

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAG 602
                 Y ++I    + G+ E+ ++L ++M +++ C+     Y   I+ LC     +EA 
Sbjct: 370 KANEYIYSSLISGLFKEGKSENAVRLWKEM-AEKGCKPNVVVYGAFIDGLCRDEKPDEAE 428

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
            IL ++L      +A T   L++ +  KG    A  V   M ++++  ++  C  +   L
Sbjct: 429 DILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGL 488

Query: 663 ILEGKSEEADTLMLRFVERG 682
              G+  EA T+    +  G
Sbjct: 489 CESGRLREALTVWTHMLGEG 508



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 31/343 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K +  +    +L  M  RG +     +S L+    + GK  NA+ +   
Sbjct: 339 VTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKE 398

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +    PN+++    I  L    K  +A   L+ M   G  PN  TY+ L+KG+     
Sbjct: 399 MAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGD 458

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SN 312
            + AI +  EM  +    + V    ++  LC+  R++E   +   M+ +         S+
Sbjct: 459 SQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSS 518

Query: 313 LFH---DQGRIEEAKELVNQMS--QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +     D G +++  +L  +M   +    PDVVTY  + N  CR   L +A  +L  M  
Sbjct: 519 MIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLD 578

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P++++   FL  L         RE IN  ++           +V+  L+RE KLS 
Sbjct: 579 EGCDPDSLTCNIFLETL---------RERINPPQDG----RLFLDELVVRLLKRERKLS- 624

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           A  +V EM+ +   P P   + +IQ  C+  ++   ++ + EC
Sbjct: 625 ALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRI---RETIDEC 664


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 234/439 (53%), Gaps = 26/439 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  D   Y  ++  L        A++ L  MA R +      ++ L+    + G++  A+
Sbjct: 42  FHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAV 101

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +LS M+K  V P  +  N+ I  L    + ++A   LE M  +G  P++ TY  LI G+
Sbjct: 102 ALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGF 160

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   +  DA+++ +++  +G  PD V+Y  ++  LCKE R+KE  DL  +M+   +    
Sbjct: 161 CKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS---- 216

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
                             C+P+ VTY ++++GFCR+G++D+A  +L++M   G  P+ V+
Sbjct: 217 ------------------CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVT 258

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YT  +NG C   +  +A +++N    +  TP+ +T++ +M GL RE +LS+A  ++ EM 
Sbjct: 259 YTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMR 318

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +K   PT    N ++   CR  +++ A+KFM E ++  C  NVV+F  +IRG C+     
Sbjct: 319 RKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSS 376

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK-GLVPTVVTYRTV 555
           EA+ L+++    + +PD V YTT+ID L +  +V+EA  +  KML + G +P  +TY T+
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436

Query: 556 IHRYCQVGRVEDLLKLLEK 574
           I   C  G ++     +EK
Sbjct: 437 ITGLCNAGMLDRARGYIEK 455



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 225/440 (51%), Gaps = 19/440 (4%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            ++ L+    +  +L  A+  L  M      P++      IH L V N+L +A +FLE M
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
               +TPNV+TY  LI G C   R+ +A+ L+ +M  K C P  V+Y +++  LCK +R 
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERA 131

Query: 298 KEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            E  DL+E+MV    +            F    + ++A  +  Q+   G  PDVVTY+ +
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191

Query: 346 VNGFCRVGELDQAKKMLQQMYHHG-CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++G C+ G L +A  +  +M   G C PNTV+Y + ++G C  GK  EA  ++    E  
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
            +P+ +TY+ +M+G  +  +L +A D++ +M +KG  P  V    L+  LCRE ++  A 
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             + E   K C+  V  + +++ G+C+   LEEA   + +   C   P+ V++  +I  L
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP--PNVVSFNIMIRGL 369

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--- 581
            K  R  EA EL+ +   +   P VV Y TVI   C+  +V++  ++  KML +  C   
Sbjct: 370 CKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPN 429

Query: 582 RTAYNQVIENLCSFGYLEEA 601
              Y+ +I  LC+ G L+ A
Sbjct: 430 SITYSTLITGLCNAGMLDRA 449



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 206/388 (53%), Gaps = 16/388 (4%)

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
           + + +TY  LI+G C + R++ A+  + +M  KG  PD  +Y  V+  LC E R+ E R 
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 303 LMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            +E+M N  NL  +              GR++EA  L+++M +  C+P  VTY ++++G 
Sbjct: 68  FLEEMAN-RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGL 125

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+     +A  +L++M + GC P+  +YT  + G C + KS +A  +        + P+ 
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGF-FPTPVEINLLIQSLCREGKMDGAKKFMQ 468
           +TYS ++ GL +EG+L EA D+   M+K G   P  V  N LI   CR GKMD A   ++
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
                G + +VV +T+L+ GFC+   L++A  LL+ M      PD VT+T+++D L +  
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV 588
           R+ +A  ++ +M  K   PTV TY T++  YC+  ++E+  K + + +       ++N +
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIM 365

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKAD 616
           I  LC      EA +++ +  R     D
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPD 393



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 187/346 (54%), Gaps = 20/346 (5%)

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD--------------QGRIEE 322
           CS D V+Y +++  LCK KR+++    + KMV  S  FH               + R+ E
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMV--SKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A++ + +M+     P+VVTYT +++G C+ G +D+A  +L +M    C P  V+Y + ++
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLIS 123

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC   ++ EA +++         P+  TY+ ++ G  +  K  +A  V  ++V +GF P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKG-CAVNVVNFTSLIRGFCQKGDLEEALSL 501
             V  + LI  LC+EG++  A       +  G C  N V + SLI GFC+ G ++EA++L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L+ M      PD VTYTT+++   K  R+++A +L+ +M  KGL P VVT+ +++   C+
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303

Query: 562 VGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKIL 605
             R+ D + +L +M  K    T   YN +++  C    LEEA K +
Sbjct: 304 ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 160/295 (54%), Gaps = 4/295 (1%)

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C  D VTYT+++ G C+V  L+QA   L +M   G  P+  +YTA ++ LC   +  EAR
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           + +        TPN +TY+V++ GL + G++ EA  ++ +M KK   PT V  N LI  L
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGL 125

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+  +   A   ++E +  GC  ++  +T+LI GFC+    ++AL + + +      PD 
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKG-LVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
           VTY+ +ID L K GR++EA +L  +M+  G  +P  VTY ++I  +C++G++++ + LLE
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 574 KMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           +M           Y  ++   C    L++A  +L ++ R     D  T   L++ 
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 166/317 (52%), Gaps = 18/317 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           +R D + Y  +++ L K    + A  +   M + G  C P   +Y  L+  + R GK+  
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG-SCMPNTVTYNSLISGFCRMGKMDE 239

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           AM +L  M +   +P+++   T ++      +L  A   L +M   G+TP+V+T+  L+ 
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM-EKMVNDSNL 313
           G C  +R+ DA+ ++ EM  K CSP   +Y T++   C+  +++E R  M E+M    N+
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNV 359

Query: 314 FH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                         R  EA ELV +  +  C PDVV YT V++G CR  ++D+A ++ ++
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419

Query: 365 MYHH-GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           M    GC PN+++Y+  + GLC+ G    AR  I    E+   PN  TY++++   R+  
Sbjct: 420 MLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKAN 475

Query: 424 KLSEACDVVREMVKKGF 440
           +  +A +++ +MV++GF
Sbjct: 476 RDEDARELLDDMVQRGF 492



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 148/307 (48%), Gaps = 4/307 (1%)

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           + C  + V+YT+ + GLC   +  +A   +     + + P+  TY+ V+H L  E +L E
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A   + EM  +   P  V   +LI  LC+ G++D A   + + + K C    V + SLI 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSK-MRKKCVPTAVTYNSLIS 123

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C+     EA  LL++M      PD  TYTT+I    K+ + ++A  +  +++++G  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKI 604
            VVTY  +I   C+ GR+++ + L  +M+    C      YN +I   C  G ++EA  +
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
           L ++  T S  D  T   L+  +        AY +  +M  + L PD+     + + L  
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303

Query: 665 EGKSEEA 671
           E +  +A
Sbjct: 304 ENRLSDA 310



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 5/217 (2%)

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           C+ + V +TSLI+G C+   LE+AL  L  M      PD  TYT +I AL    R+ EA 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIEN 591
           + + +M ++ L P VVTY  +I   C+ GRV++ + LL KM  ++KC      YN +I  
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM--RKKCVPTAVTYNSLISG 124

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC      EA  +L +++ +    D  T   L+  +        A +V  ++  R   PD
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184

Query: 652 LKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           +     + + L  EG+ +EA  L  R ++ G   P +
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNT 221


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 165/594 (27%), Positives = 282/594 (47%), Gaps = 20/594 (3%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR 165
             P Q+  +LR Q D   AL  F WA  Q  Y   P V++ +L  L++         +LR
Sbjct: 57  FSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLR 116

Query: 166 LMARRGIECRPEAFSYLMVAYSRAGKLR---NAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
            M    I      F   +  Y+ +  L    N +++L M +  AV P+    N A+ +LV
Sbjct: 117 QMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLL-MERDFAVKPDTRFYNVALSLLV 175

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
             NKL        +M    + P+V T+N LI+  C  H+++ AI ++++MP  G  PD+ 
Sbjct: 176 KANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEK 235

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQM 330
           ++ T+M    +E  ++    + E MV               N    +GRIEEA   + + 
Sbjct: 236 TFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE- 294

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            + G  PD VT+ A+VNG CR G + Q  +M+  M   G + +  +Y + ++GLC  G+ 
Sbjct: 295 -EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEI 353

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA E+++        PN +TY+ ++  L +E  +  A ++ R +  KG  P     N L
Sbjct: 354 DEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSL 413

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           IQ LC     + A +  +E   KGC  +   ++ LI   C +  L+EAL LL +M L   
Sbjct: 414 IQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGC 473

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
             + V Y T+ID L KN RV +A ++  +M   G+  + VTY T+I+  C+  RVE+  +
Sbjct: 474 ARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQ 533

Query: 571 LLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           L+++M+ +  +  +  Y  +++  C  G ++ A  I+  +     + D  T   L+    
Sbjct: 534 LMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLC 593

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             G   +A K+   +  + ++   +    V + L    +++EA  L    +E+G
Sbjct: 594 KAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKG 647



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 225/487 (46%), Gaps = 27/487 (5%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           AL+F Y    +  +  D + +  ++  L +T   +    ++  M  +G E     ++ L+
Sbjct: 288 ALRFIY---EEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLI 344

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
               + G++  A+ +L  M      PN +  NT I  L   N +  A      +   G+ 
Sbjct: 345 SGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVL 404

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+V T+N LI+G C     + A++L +EM  KGC PD+ +Y  ++  LC E+R+KE    
Sbjct: 405 PDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKE---- 460

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                              A  L+ +M   GC  +VV Y  +++G C+   +  A+ +  
Sbjct: 461 -------------------ALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFD 501

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           QM   G   ++V+Y   +NGLC + +  EA ++++    E   P+  TY+ ++    ++G
Sbjct: 502 QMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQG 561

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
            +  A D+V+ M   G  P  V    LI  LC+ G++D A K ++    KG  +    + 
Sbjct: 562 DIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYN 621

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL-SKNGRVEEATELMMKMLS 542
            +I+  C++   +EA+ L  +M      PD +TY  +   L +  G ++EA +  ++ML 
Sbjct: 622 PVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLE 681

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAG 602
           KG++P   ++  +    C +   + L++L+  ++ K +   +   +I          +A 
Sbjct: 682 KGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSETSIIRGFLKIQKFNDAL 741

Query: 603 KILGKVL 609
             LG +L
Sbjct: 742 ANLGAIL 748


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 234/439 (53%), Gaps = 26/439 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  D   Y  ++  L        A++ L  MA R +      ++ L+    + G++  A+
Sbjct: 42  FHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAV 101

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +LS M+K  V P  +  N+ I  L    + ++A   LE M  +G  P++ TY  LI G+
Sbjct: 102 ALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGF 160

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   +  DA+++ +++  +G  PD V+Y  ++  LCKE R+KE  DL  +M+   +    
Sbjct: 161 CKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS---- 216

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
                             C+P+ VTY ++++GFCR+G++D+A  +L++M   G  P+ V+
Sbjct: 217 ------------------CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVT 258

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YT  +NG C   +  +A +++N    +  TP+ +T++ +M GL RE +LS+A  ++ EM 
Sbjct: 259 YTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMR 318

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +K   PT    N ++   CR  +++ A+KFM E ++  C  NVV+F  +IRG C+     
Sbjct: 319 RKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSS 376

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK-GLVPTVVTYRTV 555
           EA+ L+++    + +PD V YTT+ID L +  +V+EA  +  KML + G +P  +TY T+
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436

Query: 556 IHRYCQVGRVEDLLKLLEK 574
           +   C  G ++     +EK
Sbjct: 437 VTGLCNAGMLDRARGYIEK 455



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 225/440 (51%), Gaps = 19/440 (4%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            ++ L+    +  +L  A+  L  M      P++      IH L V N+L +A +FLE M
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
               +TPNV+TY  LI G C   R+ +A+ L+ +M  K C P  V+Y +++  LCK +R 
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERA 131

Query: 298 KEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            E  DL+E+MV    +            F    + ++A  +  Q+   G  PDVVTY+ +
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191

Query: 346 VNGFCRVGELDQAKKMLQQMYHHG-CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++G C+ G L +A  +  +M   G C PNTV+Y + ++G C  GK  EA  ++    E  
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
            +P+ +TY+ +M+G  +  +L +A D++ +M +KG  P  V    L+  LCRE ++  A 
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             + E   K C+  V  + +++ G+C+   LEEA   + +   C   P+ V++  +I  L
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP--PNVVSFNIMIRGL 369

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--- 581
            K  R  EA EL+ +   +   P VV Y TVI   C+  +V++  ++  KML +  C   
Sbjct: 370 CKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPN 429

Query: 582 RTAYNQVIENLCSFGYLEEA 601
              Y+ ++  LC+ G L+ A
Sbjct: 430 SITYSTLVTGLCNAGMLDRA 449



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 206/388 (53%), Gaps = 16/388 (4%)

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
           + + +TY  LI+G C + R++ A+  + +M  KG  PD  +Y  V+  LC E R+ E R 
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 303 LMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            +E+M N  NL  +              GR++EA  L+++M +  C+P  VTY ++++G 
Sbjct: 68  FLEEMAN-RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGL 125

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+     +A  +L++M + GC P+  +YT  + G C + KS +A  +        + P+ 
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGF-FPTPVEINLLIQSLCREGKMDGAKKFMQ 468
           +TYS ++ GL +EG+L EA D+   M+K G   P  V  N LI   CR GKMD A   ++
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
                G + +VV +T+L+ GFC+   L++A  LL+ M      PD VT+T+++D L +  
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV 588
           R+ +A  ++ +M  K   PTV TY T++  YC+  ++E+  K + + +       ++N +
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIM 365

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKAD 616
           I  LC      EA +++ +  R     D
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPD 393



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 187/346 (54%), Gaps = 20/346 (5%)

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD--------------QGRIEE 322
           CS D V+Y +++  LCK KR+++    + KMV  S  FH               + R+ E
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMV--SKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A++ + +M+     P+VVTYT +++G C+ G +D+A  +L +M    C P  V+Y + ++
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLIS 123

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC   ++ EA +++         P+  TY+ ++ G  +  K  +A  V  ++V +GF P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKG-CAVNVVNFTSLIRGFCQKGDLEEALSL 501
             V  + LI  LC+EG++  A       +  G C  N V + SLI GFC+ G ++EA++L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L+ M      PD VTYTT+++   K  R+++A +L+ +M  KGL P VVT+ +++   C+
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303

Query: 562 VGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKIL 605
             R+ D + +L +M  K    T   YN +++  C    LEEA K +
Sbjct: 304 ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 160/295 (54%), Gaps = 4/295 (1%)

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C  D VTYT+++ G C+V  L+QA   L +M   G  P+  +YTA ++ LC   +  EAR
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           + +        TPN +TY+V++ GL + G++ EA  ++ +M KK   PT V  N LI  L
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGL 125

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+  +   A   ++E +  GC  ++  +T+LI GFC+    ++AL + + +      PD 
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKG-LVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
           VTY+ +ID L K GR++EA +L  +M+  G  +P  VTY ++I  +C++G++++ + LLE
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 574 KMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           +M           Y  ++   C    L++A  +L ++ R     D  T   L++ 
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 178/374 (47%), Gaps = 64/374 (17%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  ++    K+K    A RV   +  RG   RP+  +Y  L+    + G+L+ A+ 
Sbjct: 149 DIFTYTTLITGFCKSKKSDDALRVFEQLVARGF--RPDVVTYSCLIDGLCKEGRLKEAID 206

Query: 198 VLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           +   M++  +  PN +  N+ I       K+ +A+  LERM   G +P+V+TY  L+ G+
Sbjct: 207 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 266

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C L R+ DA  L+++M  KG +PD V++ ++M  LC+E R+ +                 
Sbjct: 267 CKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSD----------------- 309

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK-MLQQMYHHGCKPNTV 375
                 A  ++ +M +  C P V TY  +++G+CR  +L++A+K ML++M    C PN V
Sbjct: 310 ------AVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVV 360

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           S+   + GLC   +S EA E++  +      P+ + Y+ V+ GL RE K+ EAC V R+M
Sbjct: 361 SFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKM 420

Query: 436 --------------------------------VKKGFFPTPVEINLLIQSLCREGKMDGA 463
                                           ++KG  P     NLLI +  +  + + A
Sbjct: 421 LEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDA 480

Query: 464 KKFMQECLNKGCAV 477
           ++ + + + +G  V
Sbjct: 481 RELLDDMVQRGFGV 494



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 166/317 (52%), Gaps = 18/317 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           +R D + Y  +++ L K    + A  +   M + G  C P   +Y  L+  + R GK+  
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG-SCMPNTVTYNSLISGFCRMGKMDE 239

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           AM +L  M +   +P+++   T ++      +L  A   L +M   G+TP+V+T+  L+ 
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM-EKMVNDSNL 313
           G C  +R+ DA+ ++ EM  K CSP   +Y T++   C+  +++E R  M E+M    N+
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNV 359

Query: 314 FH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                         R  EA ELV +  +  C PDVV YT V++G CR  ++D+A ++ ++
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419

Query: 365 MYHH-GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           M    GC PN+++Y+  + GLC+ G    AR  I    E+   PN  TY++++   R+  
Sbjct: 420 MLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKAN 475

Query: 424 KLSEACDVVREMVKKGF 440
           +  +A +++ +MV++GF
Sbjct: 476 RDEDARELLDDMVQRGF 492



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 148/307 (48%), Gaps = 4/307 (1%)

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           + C  + V+YT+ + GLC   +  +A   +     + + P+  TY+ V+H L  E +L E
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A   + EM  +   P  V   +LI  LC+ G++D A   + + + K C    V + SLI 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSK-MRKKCVPTAVTYNSLIS 123

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C+     EA  LL++M      PD  TYTT+I    K+ + ++A  +  +++++G  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKI 604
            VVTY  +I   C+ GR+++ + L  +M+    C      YN +I   C  G ++EA  +
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
           L ++  T S  D  T   L+  +        AY +  +M  + L PD+     + + L  
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303

Query: 665 EGKSEEA 671
           E +  +A
Sbjct: 304 ENRLSDA 310



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 5/217 (2%)

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           C+ + V +TSLI+G C+   LE+AL  L  M      PD  TYT +I AL    R+ EA 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIEN 591
           + + +M ++ L P VVTY  +I   C+ GRV++ + LL KM  ++KC      YN +I  
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM--RKKCVPTAVTYNSLISG 124

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC      EA  +L +++ +    D  T   L+  +        A +V  ++  R   PD
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184

Query: 652 LKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           +     + + L  EG+ +EA  L  R ++ G   P +
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNT 221


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 165/590 (27%), Positives = 278/590 (47%), Gaps = 17/590 (2%)

Query: 110 QICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR 169
           ++ A LR Q+D   AL+    A  +  +     VY  +++ L         + ++R M R
Sbjct: 58  RLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRR 117

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAM-YVLSMMQKA--AVAPNLLICNTAIHVLVVGNK 226
            G + R       + +Y+R  +  +A+  VL+ +      V  + ++ N  ++VLV G+K
Sbjct: 118 EGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSK 177

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L         M   GI P+V+T N LIK  C  H+++ A+ +++EM   G +PD+ ++ T
Sbjct: 178 LKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTT 237

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMG 334
           +M    +E  I+    +  KM+               N +   GR+E+A   + Q    G
Sbjct: 238 LMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADG 297

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             PD VTY   V+G C+ G +  A K++  M   G  P+  +Y   +N L  NG+  EA+
Sbjct: 298 FEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAK 357

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            ++N   +    P+  T++ ++  L  + +L EA D+ RE+  KG  P     N+LI +L
Sbjct: 358 GIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINAL 417

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G      +  +E  + GC  + V +  LI   C  G L  AL LL++M        T
Sbjct: 418 CKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRST 477

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VTY TIIDAL K  R+EEA E+  +M ++G+  + VT+ T+I   C+  R++D  +L+E+
Sbjct: 478 VTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQ 537

Query: 575 MLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M+ +  Q     YN ++ + C  G +++A  IL  +     + D  T   L+      G 
Sbjct: 538 MVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 597

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             +A K+   M  + + P  K    V + L       +A  L     E G
Sbjct: 598 TQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVG 647



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 131/542 (24%), Positives = 239/542 (44%), Gaps = 83/542 (15%)

Query: 120 DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF 179
           D+ V L      +  +  + D +V+  +L +L +    +  + V   M  RGI+      
Sbjct: 141 DDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTL 200

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
           + L+ A  RA ++R A+ +L  M    VAP+     T +   +    +  ALR   +M  
Sbjct: 201 NTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMME 260

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAI--------------------------------- 266
           AG +P  +T N LI GYC + R++DA+                                 
Sbjct: 261 AGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSH 320

Query: 267 --KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFH---- 315
             K++D M  +G  PD  +Y TV+  L K   + E + ++ +MV+     D+  F+    
Sbjct: 321 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 380

Query: 316 ---DQGRIEEAKELV-----------------------------------NQMSQMGCIP 337
               Q R+EEA +L                                     +M   GC P
Sbjct: 381 ALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP 440

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D VTY  +++  C +G+L  A  +L +M  +GC  +TV+Y   ++ LC   +  EA E+ 
Sbjct: 441 DEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVF 500

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +  + +  + +A+T++ ++ GL +  ++ +A +++ +MVK+G  P  +  N ++   C++
Sbjct: 501 DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQ 560

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G +  A   ++     G  ++VV + +LI G C+ G  + AL LL  M +    P    Y
Sbjct: 561 GNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 620

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ-VGRVEDLLKLLEKML 576
             +I +L +   + +A  L  +M   G  P  +TY+ V    C+  G +++    L +M+
Sbjct: 621 NPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMV 680

Query: 577 SK 578
           +K
Sbjct: 681 NK 682



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 176/379 (46%), Gaps = 62/379 (16%)

Query: 139 HDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRN 194
           HDP V  Y  ++  LSK      AK ++  M  RG  C P+   F+ L+VA S   +L  
Sbjct: 333 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG--CLPDTTTFNTLIVALSSQNRLEE 390

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +   +    ++P++   N  I+ L         +R  E M+ +G TP+ +TYN LI 
Sbjct: 391 ALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILID 450

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VND 310
             C + ++ +A+ L++EM   GC    V+Y T++  LCK+ RI+E  ++ ++M    ++ 
Sbjct: 451 HLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISR 510

Query: 311 SNLFHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
           S +  +          RI++A EL+ QM + G  P+ +TY +++  +C+ G + +A  +L
Sbjct: 511 SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADIL 570

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA----------------------------- 393
           + M  +G + + V+Y   +NGLC  G++  A                             
Sbjct: 571 ETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRR 630

Query: 394 ----------REMINTSEEEWWTPNAITYSVVMHGL-RREGKLSEACDVVREMVKKGFFP 442
                     REM    E     P+A+TY +V   L R  G + EA D + EMV KGF P
Sbjct: 631 NNLRDALNLFREMTEVGEP----PDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMP 686

Query: 443 TPVEINLLIQSLCREGKMD 461
                 +L + L   G  D
Sbjct: 687 EFSSFRMLAEGLLNLGMDD 705



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 6/200 (3%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           +C  +R +  E V    F   D Q   R   + +  +++ L K K    A  ++  M + 
Sbjct: 487 LCKKMRIEEAEEV----FDQMDAQGISR-SAVTFNTLIDGLCKAKRIDDATELIEQMVKE 541

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G++     ++ ++  Y + G ++ A  +L  M       +++   T I+ L    +   A
Sbjct: 542 GLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVA 601

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           L+ L  M++ GI P    YN +I+     + ++DA+ L  EM   G  PD ++Y  V   
Sbjct: 602 LKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRS 661

Query: 291 LCK-EKRIKEVRDLMEKMVN 309
           LC+    IKE  D + +MVN
Sbjct: 662 LCRGGGPIKEAFDFLVEMVN 681


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 160/553 (28%), Positives = 253/553 (45%), Gaps = 51/553 (9%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLM------ARRGIEC--- 174
           AL+ F+   R+     +P +Y  ++ +L+  KL   A+ ++R +      +RR   C   
Sbjct: 53  ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSV 112

Query: 175 ------------RPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
                        P  F  L++A+S  G +  A++V   M    V P +  CN  +  LV
Sbjct: 113 FNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLV 169

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              +     +    M   G +PNV+TY  LI G C       A +L DEM  K   P  V
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFHDQ---------GRIEEAKELVNQM 330
            Y  ++  LC E RI E   +   M N     NL+              +++A EL  +M
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEM 289

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              G +P+VVT+  +++G C+  E+  A+K L  M   G  PN   Y   ++G C  G  
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA  + +  E+    P+  TYS+++ GL    ++ EA  +++EM KKGF P  V  N L
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I   C+EG M+ A +   +   KG   N++ F++LI G+C+ G +E A+ L  +M +   
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            PD V YT +ID   K+G  +EA  L  +M   GL P V T   +I   C+ GR+ D +K
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529

Query: 571 LL------------EKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
           L                L +  C      Y  +I+ LC+ G + +A K    +  +  + 
Sbjct: 530 LFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589

Query: 616 DASTCHVLVESYL 628
           D  TC V+++ + 
Sbjct: 590 DVFTCIVIIQGHF 602



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 218/484 (45%), Gaps = 33/484 (6%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           M+L+ L K        +V   M  RG       +  L+    R G    A  +   M + 
Sbjct: 163 MVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEK 222

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            + P ++I    I  L   +++++A      M+ +G+ PN+ TYN ++ GYC +  +K A
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH------- 315
           ++L  EM   G  P+ V++  ++  LCK   +   R  +  M +     N+F        
Sbjct: 283 LELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342

Query: 316 --DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
               G + EA  L +++ +   +PDV TY+ ++ G C V  +++A  +LQ+M   G  PN
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            V+Y   ++G C  G   +A E+ +   E+   PN IT+S ++ G  + GK+  A  +  
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EMV KG  P  V    LI    ++G    A +  +E    G   NV   + LI G C+ G
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522

Query: 494 DLEEALSLLD---------------DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            + +A+ L                 D  LC   P+ V YT +I  L  +GR+ +A++   
Sbjct: 523 RISDAIKLFLAKTGTDTTGSKTNELDRSLCS--PNHVMYTALIQGLCTDGRIFKASKFFS 580

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYL 598
            M   GL P V T   +I  + +   + D++ L   +L   K     N  +  + + GY 
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADIL---KMGIIPNSSVYRVLAKGY- 636

Query: 599 EEAG 602
           EE+G
Sbjct: 637 EESG 640



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 200/443 (45%), Gaps = 36/443 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           ++Y +++  L        A+ + R M   G+      ++ +M  Y +   ++ A+ +   
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXE 288

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + PN++     I  L   +++  A +FL  M   G+ PN+  YNCLI GYC    
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A+ L  E+      PD  +Y  ++  LC   R+                       E
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM-----------------------E 385

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA  L+ +M + G +P+ VTY  +++G+C+ G +++A ++  QM   G +PN ++++  +
Sbjct: 386 EADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLI 445

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G C  GK   A  +      +   P+ + Y+ ++ G  ++G   EA  + +EM + G  
Sbjct: 446 DGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505

Query: 442 PTPVEINLLIQSLCREGKM-DGAKKFMQEC-----------LNKG-CAVNVVNFTSLIRG 488
           P    ++ LI  LC++G++ D  K F+ +            L++  C+ N V +T+LI+G
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQG 565

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C  G + +A     DM      PD  T   II    +   + +   L   +L  G++P 
Sbjct: 566 LCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625

Query: 549 VVTYRTVIHRYCQVGRVEDLLKL 571
              YR +   Y + G ++  L  
Sbjct: 626 SSVYRVLAKGYEESGYLKSALSF 648



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 162/356 (45%), Gaps = 31/356 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + + ++++ L KT     A++ L  MA  G+   P  F Y  L+  Y +AG L  A+ + 
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVV--PNIFVYNCLIDGYCKAGNLSEALSLH 356

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S ++K  + P++   +  I  L   +++ +A   L+ M+  G  PN +TYN LI GYC  
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------ 313
             ++ AI++  +M  KG  P+ +++ T++   CK  +++    L  +MV    L      
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476

Query: 314 -------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML---- 362
                  F D G  +EA  L  +M + G  P+V T + +++G C+ G +  A K+     
Sbjct: 477 TALIDGHFKD-GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKT 535

Query: 363 ---------QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
                     ++    C PN V YTA + GLC +G+  +A +  +        P+  T  
Sbjct: 536 GTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCI 595

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           V++ G  R   L +   +  +++K G  P      +L +     G +  A  F  E
Sbjct: 596 VIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE 651



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 163/348 (46%), Gaps = 7/348 (2%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P+V  +  ++  F  +G +++A   L   Y     P   +    L+GL   G+     ++
Sbjct: 126 PNV--FGVLIIAFSEMGLVEEA---LWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
                    +PN +TY  ++ G  R+G   +A  +  EM++K  FPT V   +LI+ LC 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           E ++  A+   +   N G   N+  + +++ G+C+   +++AL L  +M      P+ VT
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVT 300

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           +  +ID L K   +  A + ++ M S G+VP +  Y  +I  YC+ G + + L L  ++ 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 577 SKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
             +       Y+ +I+ LC    +EEA  +L ++ +     +A T + L++ Y  +G   
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 635 LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            A +V  +M  + + P++     + +     GK E A  L    V +G
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 129/286 (45%), Gaps = 7/286 (2%)

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           E   +TPN   + V++      G + EA  V  +M      P     N+++  L ++G+ 
Sbjct: 120 ESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRF 174

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D   K   + + +G + NVV + +LI G C++GD  +A  L D+M   K  P  V YT +
Sbjct: 175 DTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTIL 234

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           I  L    R+ EA  +   M + G++P + TY T++  YC++  V+  L+L  +ML    
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGL 294

Query: 581 CR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
                 +  +I+ LC    +  A K L  +       +    + L++ Y   G    A  
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALS 354

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           +   +    ++PD+     + + L    + EEAD L+    ++G +
Sbjct: 355 LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 92/424 (21%), Positives = 157/424 (37%), Gaps = 75/424 (17%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P    Y  L+      G++  A    S M+ + + P++  C     V++ G+  A  L
Sbjct: 552 CSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCI----VIIQGHFRAMHL 607

Query: 232 RFLERMQL----AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE--MPLKGCSPDKVSYY 285
           R +  +Q      GI PN   Y  L KGY +   +K A+    E   PL   + +    Y
Sbjct: 608 RDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSY 667

Query: 286 TVMG--YLCKEKRIKEVRDLMEKMVNDSNL-----FH----------------------D 316
           T+     LC     KE            +      FH                      D
Sbjct: 668 TIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGD 727

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           Q R  +A +L  QM      PD+VT T  ++    +G LD  + +   + H G   +   
Sbjct: 728 Q-RPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCL 786

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
             + +N     G+   AR + + ++++    +  T++ ++ G    G+  EA  +  EM 
Sbjct: 787 NNSLINMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMK 842

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +                  R+ K +G      E  +     N V F  ++      G +E
Sbjct: 843 ET-------------NKRARKNKRNG------EXESSLVLPNDVTFMGVLMACSHAGLVE 883

Query: 497 EALSLLDDMYLCKKD----PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           E       M   K+D    P    +  ++D L + G + EA E ++KM  +   P  V +
Sbjct: 884 EGKQHFRSM---KEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVR---PNAVVW 937

Query: 553 RTVI 556
           RT++
Sbjct: 938 RTLL 941


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 277/533 (51%), Gaps = 22/533 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y  D     ++L  L K+   + A R +  +  +G+ C    F+  +    RA ++ +A 
Sbjct: 12  YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQ 70

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            V   M+K    PN +  N  +  L  G +++ A    ERM  AG +P+V+TYN L+ G+
Sbjct: 71  TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
           C + ++ +A+K+ D    +G  PD V+Y  ++   CK  ++ E + ++++MV++S     
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDV 190

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR-VGELDQAKKMLQ 363
                  N     GR++EA+ L+      G  P+V+TY+ +++G CR +  L+ A+++L+
Sbjct: 191 VTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLE 247

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M  +GCKP+ VSY A ++GL       EA ++  +   + + P   TY++++ GL +E 
Sbjct: 248 KMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKED 307

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           +++EA ++   +VK G  P  +   + I  LC+ G+++ A   +++   KGC  +VV+  
Sbjct: 308 RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHN 367

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           ++I G C++  ++EA  LL  M      P+ +++ T+I    + G+ ++A     +ML +
Sbjct: 368 AVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR 427

Query: 544 GLVPTVVTYRTVIHRYC---QVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYL 598
           G+ PTVVTY  ++   C   Q GR+++ + L + M+ K +      Y+ +I+ L   G L
Sbjct: 428 GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKL 487

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           ++A ++LG +       +  T + L+           A ++   M  +  +PD
Sbjct: 488 DDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPD 540



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/489 (31%), Positives = 254/489 (51%), Gaps = 25/489 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y  D + Y  +L    K      A ++     +RG       ++ L+  + +A KL  A 
Sbjct: 116 YSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQ 175

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA--GITPNVLTYNCLIK 254
            +L  M   ++ P+++  N+ ++ L    ++ +A     RM +   G +PNV+TY+ LI 
Sbjct: 176 RILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEA-----RMLIVDKGFSPNVITYSTLIS 230

Query: 255 GYC-DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE--------VRDLME 305
           G C +L R++ A +L+++M L GC PD VSY  ++  L +E+ + E        +R   E
Sbjct: 231 GLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYE 290

Query: 306 KMVNDSNLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
             V   N+  D    + R+ EA EL + + + G  PD +TYT  ++G C+ G ++ A  M
Sbjct: 291 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 350

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L+ M   GC P+ VS+ A +NGLC   +  EA  +++  E +  +PNAI+++ ++ G  R
Sbjct: 351 LKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCR 410

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR---EGKMDGAKKFMQECLNKGCAVN 478
            GK  +A    +EM+K+G  PT V  N+L+  LC+   EG++  A       + KG   +
Sbjct: 411 AGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPD 470

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           VV +++LI G  + G L++A  LL  M      P+  TY ++I  L    +V+EA EL +
Sbjct: 471 VVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFV 530

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFG 596
            M+ KG VP  +TY T+I   C+   V+  L L +  L      T+  Y  +I+ LC+  
Sbjct: 531 AMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVA 590

Query: 597 YLEEAGKIL 605
            ++EA K+L
Sbjct: 591 RVDEALKLL 599



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/492 (30%), Positives = 244/492 (49%), Gaps = 51/492 (10%)

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
           +P+       +  L+   K+ KA RF+E++ + G+  ++ T+N  I G C   RI DA  
Sbjct: 13  SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQT 71

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHD-- 316
           + D M   G  P++++Y  ++  LC   R+ + + L E+M         V  + L H   
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 317 -QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G+++EA ++ +   + G +PDVVTY A++NGFC+  +LD+A+++LQ+M      P+ V
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE-GKLSEACDVVRE 434
           +Y + +NGLC NG+  EAR +I    ++ ++PN ITYS ++ GL RE  +L  A  ++ +
Sbjct: 192 TYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLEK 248

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MV  G  P  V  N LI  L RE  +  A K     L +G    V  +  LI G  ++  
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDR 308

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           + EA  L   +     +PD +TYT  ID L K GRVE+A  ++  M  KG VP VV++  
Sbjct: 309 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 368

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTA 612
           VI+  C+  RV++   LL  M +K     A  +N +I   C  G  ++A     ++L+  
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 428

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
            K    T ++LV+                            LCK   E     G+ +EA 
Sbjct: 429 VKPTVVTYNILVDG---------------------------LCKARQE-----GRIKEAI 456

Query: 673 TLMLRFVERGHI 684
           TL    +E+G +
Sbjct: 457 TLFDAMIEKGRV 468


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 163/618 (26%), Positives = 291/618 (47%), Gaps = 40/618 (6%)

Query: 108 PRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGA----KR 162
           P     VL S +   R+AL+ F WA+ Q  +R    V+  +LEIL++  L + A    +R
Sbjct: 81  PDLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMER 140

Query: 163 VLRLMARRGI----------ECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
           V+     R +          E   +    L+  YS+   +   + V   M K+ ++P++ 
Sbjct: 141 VINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVK 200

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
            CN  + +L   + ++KA+     M   GI P ++TYN L+  YC   +++  + L+ EM
Sbjct: 201 NCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM 260

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRI 320
             +GC+P+ V+Y  ++  L K+   ++ + L+ +M+                 + ++G +
Sbjct: 261 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGML 320

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            EA  L  +M   G  P V TY + + G C++G +  A + L  M  +   P+ VSY   
Sbjct: 321 AEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL 380

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           + G C  G  ++A  + +     +  P  +TY+ ++ GL R+G+L  A  +  EM+ +G 
Sbjct: 381 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  V   +L+   C+ G +  A++F  E L++G  ++   + + I G  + GD   A S
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFS 500

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L ++M      PD + Y  ++D L K G +EEA+EL+ KM+S G++P  VTY ++IH + 
Sbjct: 501 LQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHL 560

Query: 561 QVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           + GR+    ++  +MLSK        Y  +I      G LE A     ++       +  
Sbjct: 561 ENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVI 620

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE-----GKSEEADT 673
           T + L+           AY     M  + + P+     K S  +++      G  +EA +
Sbjct: 621 TYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPN-----KYSYTILINENCNMGNWQEALS 675

Query: 674 LMLRFVERGHIQPKSEEH 691
           L  + ++RG +QP S  H
Sbjct: 676 LYKQMLDRG-VQPDSCTH 692



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 218/492 (44%), Gaps = 82/492 (16%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L IL    L   A  V R M   GI+     ++ L+ +Y + GK++  + +LS MQ+  
Sbjct: 205 ILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG 264

Query: 207 VAPNLLICNTAIHVL-----------VVG----------------------NK--LAKAL 231
            APN +  N  I+ L           ++G                      NK  LA+AL
Sbjct: 265 CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEAL 324

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
              E M L G +P V TYN  I G C L R+ DA++ + +M      PD VSY T++   
Sbjct: 325 SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGY 384

Query: 292 CKEKRI-------KEVRD--LMEKMVNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDV 339
           C+   +        E+R   L   +V  + L      QG +E A++L  +M   G  PD+
Sbjct: 385 CRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDI 444

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK---------------------------- 371
           VTYT +VNG C++G L  A++   +M H G +                            
Sbjct: 445 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 504

Query: 372 -------PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
                  P+ + Y   ++GLC  G   EA E++     +   P+ +TY+ ++H     G+
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L +  ++  EM+ KG  P+ V   +LI     +G+++ A  +  E   KG   NV+ + S
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G C+   +++A +   +M      P+  +YT +I+     G  +EA  L  +ML +G
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684

Query: 545 LVPTVVTYRTVI 556
           + P   T+  ++
Sbjct: 685 VQPDSCTHSALL 696



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 205/437 (46%), Gaps = 47/437 (10%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y +++  LSK    + AK ++  M + G++     ++ L+  Y   G L  A+ +   
Sbjct: 270 VTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEE 329

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M     +P +   N+ I+ L    +++ A++ L  M    + P+V++YN LI GYC L  
Sbjct: 330 MVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGN 389

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND----------- 310
           +  A  L DE+      P  V+Y T++  LC++  ++  + L  +M+N+           
Sbjct: 390 LMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTI 449

Query: 311 -------------SNLFHDQ-----------------------GRIEEAKELVNQMSQMG 334
                        +  F D+                       G    A  L  +M   G
Sbjct: 450 LVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG 509

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             PD++ Y  VV+G C++G L++A ++LQ+M   G  P+ V+YT+ ++    NG+  + R
Sbjct: 510 FPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGR 569

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E+      +  TP+ +TY+V++HG   +G+L  A     EM +KG  P  +  N LI  L
Sbjct: 570 EIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGL 629

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+  +MD A  F  E + KG   N  ++T LI   C  G+ +EALSL   M      PD+
Sbjct: 630 CKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDS 689

Query: 515 VTYTTIIDALSKNGRVE 531
            T++ ++  L K+ +++
Sbjct: 690 CTHSALLKQLGKDCKLQ 706



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 69/142 (48%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
            + +   M  +G+      ++ L+  ++  G+L  A    S MQ+  + PN++  N+ I+
Sbjct: 568 GREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLIN 627

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    ++ +A  F   M   GI PN  +Y  LI   C++   ++A+ L  +M  +G  P
Sbjct: 628 GLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQP 687

Query: 280 DKVSYYTVMGYLCKEKRIKEVR 301
           D  ++  ++  L K+ +++ V 
Sbjct: 688 DSCTHSALLKQLGKDCKLQAVH 709


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 165/556 (29%), Positives = 265/556 (47%), Gaps = 15/556 (2%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y ++   L + K    AK     M + G++    A S L+  + R G +   + +  +M
Sbjct: 12  TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM 71

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
               +  NL+  N  IH L    K+ KA   L+ M   G  PN  T+  LI+GYC  H +
Sbjct: 72  VSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNM 131

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNL 313
             A++L+DEM  +   P  VSY  ++  LC  K +     L+EKM         V  S L
Sbjct: 132 GRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL 191

Query: 314 ---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
              +  +GRIEEA+ L++ MS  G  PD+  Y A+++   + G++++A   L ++   G 
Sbjct: 192 IMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 251

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           KP+ V++ AF+ G    GK  EA +  +   +    PN   Y+V+++G  + G L EA  
Sbjct: 252 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 311

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           + R +   G  P     +  I  L + G++  A K   E   KG   +V  ++SLI GFC
Sbjct: 312 IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 371

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           ++G++E+A  L D+M L    P+   Y  ++D L K+G ++ A +L   M  KGL P  V
Sbjct: 372 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 431

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
           TY T+I  YC+   V +   L  +M SK  Q     YN ++   C  G +E+A  +  ++
Sbjct: 432 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 491

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
           L+    A   + + L++ Y        A ++   M  + ++PD      V +     GK 
Sbjct: 492 LQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKM 550

Query: 669 EEADTLMLRFVERGHI 684
           EEA+ L     ER  I
Sbjct: 551 EEANLLFKEMQERNLI 566



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 160/569 (28%), Positives = 277/569 (48%), Gaps = 32/569 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  M+  L   K    A ++L  M   G++     +S L++ Y+  G++  A  +L  
Sbjct: 151 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDG 210

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M  + VAP++   N  I  L    K+ +A  +L  +Q  G+ P+ +T+   I GY    +
Sbjct: 211 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 270

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VND----SN 312
           + +A K  DEM   G  P+   Y  ++    K   + E   +   +     + D    S 
Sbjct: 271 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSA 330

Query: 313 LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             H     GR++EA ++ +++ + G +PDV TY+++++GFC+ GE+++A ++  +M   G
Sbjct: 331 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 390

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PN   Y A ++GLC +G    AR++ +   E+   P+++TYS ++ G  +   ++EA 
Sbjct: 391 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 450

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            +  EM  KG  P     N L+   C+EG M+ A    +E L KG A   ++F +LI G+
Sbjct: 451 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGY 509

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT--------------- 534
           C+   ++EA  L  +M   +  PD VTYTT+ID   K G++EEA                
Sbjct: 510 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDT 569

Query: 535 --ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIE 590
              L  KM++KG+ P  VTY  VI+ +C+   + +  KL ++++ K      T ++ +I 
Sbjct: 570 VFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLIT 629

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC    L EA K+L ++     K   + C  LV S+   G    A +V   + +  L+P
Sbjct: 630 ALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVP 689

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFV 679
           D      +    + +  SE+A  L+ + V
Sbjct: 690 DTTTLIDLVNGNLNDTDSEDARNLIKQLV 718



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 218/478 (45%), Gaps = 31/478 (6%)

Query: 129 YWADRQWR-YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS 187
           Y  + Q R  + D + +   +   SKT     A +    M   G+      ++ L+  + 
Sbjct: 242 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 301

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           +AG L  A+ +   +    V P++  C+  IH L+   ++ +AL+    ++  G+ P+V 
Sbjct: 302 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 361

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TY+ LI G+C    ++ A +L DEM LKG +P+   Y  ++  LCK   I+  R L + M
Sbjct: 362 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 421

Query: 308 ---------VNDSNLFHDQGRIE---EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                    V  S +     + E   EA  L ++M   G  P    Y A+V+G C+ G++
Sbjct: 422 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 481

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           ++A  + ++M   G    T+S+   ++G C + K  EA ++      +   P+ +TY+ V
Sbjct: 482 EKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 540

Query: 416 MHGLRREGKLSEACDVVRE-----------------MVKKGFFPTPVEINLLIQSLCREG 458
           +    + GK+ EA  + +E                 MV KG  P  V   L+I + C+E 
Sbjct: 541 IDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKED 600

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
            +  A K   E + KG          LI   C++ DL EA  LLD+M      P     +
Sbjct: 601 NLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACS 660

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           T++ +  + G+++EAT +   + S GLVP   T   +++        ED   L+++++
Sbjct: 661 TLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 180/402 (44%), Gaps = 25/402 (6%)

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMS 331
           M  KG  P+  +Y  +   LC+ KR+ E                       AK    +M 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNE-----------------------AKLTFEEMQ 37

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
           + G  PD    +A+++GF R G++D+  ++   M   G   N ++Y   ++GLC  GK  
Sbjct: 38  KTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKME 97

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           +A E++         PN+ T+ +++ G  RE  +  A +++ EM K+   P+ V    +I
Sbjct: 98  KAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMI 157

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LC    +  A K +++    G   NVV +++LI G+  +G +EEA  LLD M      
Sbjct: 158 NGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVA 217

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD   Y  II  LSK G++EEA+  ++++  +GL P  VT+   I  Y + G++ +  K 
Sbjct: 218 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 277

Query: 572 LEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
            ++ML          Y  +I      G L EA  I   +       D  TC   +   L 
Sbjct: 278 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLK 337

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
            G    A KV   +  + L+PD+     +      +G+ E+A
Sbjct: 338 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKA 379


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 160/531 (30%), Positives = 268/531 (50%), Gaps = 34/531 (6%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVL- 199
            Y +++  L K +L   A  VL+ M R G    P+  +Y  V   + + G++  A  +L 
Sbjct: 11  TYNVVVNGLCKARLTSKAYEVLKEM-RDGKSVAPDLVTYSTVINGFCKQGEMDRACEILR 69

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            M+ +  +AP+++   + +  L    K+ +A   +  M+L G+ P+  T++ LI G+C+ 
Sbjct: 70  EMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNA 129

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            ++ +A+KL  E+    C  D VS   ++  LC+E+RI E  +L ++M            
Sbjct: 130 RKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEM------------ 177

Query: 320 IEEAKELVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
                    +M + G   PDVVTYTA+++GFC+ G L++A KML  M    C PN V+Y+
Sbjct: 178 ---------EMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYS 228

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           + L+GLC  G   +A ++      +   PN +TY+ ++HGL    K+  A  ++ EM   
Sbjct: 229 SLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT 288

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
                 V  N L+   CR G+++ AK+  +E   K C  + + +T L+RGFC    LEEA
Sbjct: 289 CCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEA 348

Query: 499 LSLLDDMYLCKK-DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
             LL++M      DPD VTY+ ++   S+  R  EA E + +M+++ + P  VTY ++I 
Sbjct: 349 RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLID 408

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
             C+ GRV   +++L K + K    T Y  VIE LC     EEA  +L +++    +   
Sbjct: 409 GLCKAGRVNHAMEVL-KNVDKPDVVT-YTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSV 466

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
            T + ++ +    G    A+K+   M    L P +     V+   +LEG S
Sbjct: 467 GTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGM-----VTYTTLLEGFS 512



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 266/517 (51%), Gaps = 29/517 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L +      A  ++R M  +G+E     FS L+  +  A K+  A+ + 
Sbjct: 80  DVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLY 139

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL---AGITPNVLTYNCLIKGY 256
             +  ++   + +  +  I  L    ++ +A    + M++       P+V+TY  LI G+
Sbjct: 140 KEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGF 199

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------- 307
           C    ++ A+K++  M  + C P+ V+Y +++  LCK   + +  DL  +M         
Sbjct: 200 CKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNV 259

Query: 308 VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           V  + L H      +++ A+ L+++M+   C  D V+Y A+++G+CR+G +++AK++ ++
Sbjct: 260 VTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKE 319

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI-NTSEEEWWTPNAITYSVVMHGLRREG 423
           M    C P+ ++YT  + G C+  +  EAR ++ N        P+ +TYS+V+ G  R  
Sbjct: 320 MAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK 379

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           +  EA + ++EM+ +   P  V  + LI  LC+ G+++ A + ++  ++K    +VV +T
Sbjct: 380 RFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKN-VDKP---DVVTYT 435

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            +I G C     EEAL+LL++M   + +P   T+ ++I AL + G ++EA +L++ M + 
Sbjct: 436 IVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAH 495

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---------AYNQVIENLCS 594
           GL P +VTY T++  + + GR+E   +L E M  K K  +         A++ +I  LC 
Sbjct: 496 GLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCK 555

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
              +++A  ++ ++     +     C  +V+  L  G
Sbjct: 556 AREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAG 592



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 224/448 (50%), Gaps = 43/448 (9%)

Query: 175 RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           +P+  +Y  L+  + ++G L  AM +L +M+     PN++  ++ +H L     L +AL 
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 245

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
              RM   G  PNV+TY  LI G C  H++  A  L+DEM    C  D VSY  ++   C
Sbjct: 246 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYC 305

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           +                        GRIEEAK+L  +M+   C+PD +TYT +V GFC  
Sbjct: 306 R-----------------------LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNA 342

Query: 353 GELDQAKKMLQQM-YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
             L++A+ +L+ M    G  P+ V+Y+  + G     + +EA E I         PNA+T
Sbjct: 343 SRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVT 402

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           YS ++ GL + G+++ A +V++ + K    P  V   ++I+ LC   + + A   ++E +
Sbjct: 403 YSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMV 458

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
           NK    +V  F S+I   C+ GD++EA  LL  M     +P  VTYTT+++  S+ GR+E
Sbjct: 459 NKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRME 518

Query: 532 EATELMMKMLSKG--------LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
            A EL   M  K         LVP    +  +I   C+   ++  + ++E++ S++ C  
Sbjct: 519 IAYELFEVMRRKAKKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRE-CEP 576

Query: 584 AYNQ---VIENLCSFGYLEEAGKILGKV 608
           A      +++ L   G  EEAGK++  +
Sbjct: 577 AEEDCLAIVDGLLRAGRTEEAGKLINSI 604



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 227/500 (45%), Gaps = 60/500 (12%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM-PLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           + PN  TYN ++ G C       A +++ EM   K  +PD V+Y TV+   CK+  +   
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 301 RDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
            +++ +MV    +  D              G+++ A E+V +M   G  PD  T++A++ 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 348 GFCRVGELDQAKKMLQQMYHHGC------------------------------------- 370
           G+C   ++D+A K+ +++    C                                     
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 371 -KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            KP+ V+YTA ++G C +G   +A +M+   E     PN +TYS ++HGL + G L +A 
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           D+ R M  KG  P  V    LI  LC   K+D A+  M E     C  + V++ +L+ G+
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM-LSKGLVPT 548
           C+ G +EEA  L  +M      PD +TYT ++       R+EEA  L+  M  + G+ P 
Sbjct: 305 CRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILG 606
           VVTY  V+  Y +  R  +  + +++M+++     A  Y+ +I+ LC  G +  A     
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA----M 420

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
           +VL+   K D  T  +++E          A  +   M N+ + P +     V   L   G
Sbjct: 421 EVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLG 480

Query: 667 KSEEADTLMLRFVERGHIQP 686
             +EA  L++     G ++P
Sbjct: 481 DMDEAWKLLVAMAAHG-LEP 499



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 213/453 (47%), Gaps = 39/453 (8%)

Query: 132 DRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRA 189
           D  W+   D + Y  +++   K+   + A ++L +M   G +C P   +Y  L+    +A
Sbjct: 182 DGAWK--PDVVTYTALIDGFCKSGNLEKAMKMLGVM--EGRKCVPNVVTYSSLLHGLCKA 237

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G L  A+ +   M      PN++   T IH L   +K+  A   ++ M       + ++Y
Sbjct: 238 GDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSY 297

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N L+ GYC L RI++A +L  EM  K C PD+++Y  ++   C   R++E R L+E    
Sbjct: 298 NALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLE---- 353

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                             N  +  G  PDVVTY+ VV G+ R     +A + +Q+M    
Sbjct: 354 ------------------NMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN 395

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PN V+Y++ ++GLC  G+   A E++   ++    P+ +TY++V+ GL    +  EA 
Sbjct: 396 VAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEAL 451

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            ++ EMV K   P+    N +I +LCR G MD A K +      G    +V +T+L+ GF
Sbjct: 452 TLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGF 511

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTV-------TYTTIIDALSKNGRVEEATELMMKMLS 542
            + G +E A  L + M    K   +         ++ +I  L K   +++A  ++ ++ S
Sbjct: 512 SRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRS 571

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           +   P       ++    + GR E+  KL+  +
Sbjct: 572 RECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 604



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 143/326 (43%), Gaps = 77/326 (23%)

Query: 403 EWWTPNAITYSVVMHGL------------------------------------RREGKLS 426
           E+  PN  TY+VV++GL                                     ++G++ 
Sbjct: 3   EFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD 62

Query: 427 EACDVVREMVKK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            AC+++REMV + G  P  V    ++  LCR+GKMD A + ++E   KG   +   F++L
Sbjct: 63  RACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 122

Query: 486 IRGFCQKGDLEEALSLLDDMY-----------------LCKK------------------ 510
           I G+C    ++EAL L  ++                  LC++                  
Sbjct: 123 ITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRED 182

Query: 511 ---DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD VTYT +ID   K+G +E+A +++  M  +  VP VVTY +++H  C+ G ++ 
Sbjct: 183 GAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQ 242

Query: 568 LLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            L L  +M SK        Y  +I  LC+   ++ A  ++ ++  T   AD  + + L++
Sbjct: 243 ALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLD 302

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPD 651
            Y   G    A ++   M  ++ +PD
Sbjct: 303 GYCRLGRIEEAKQLFKEMAAKSCLPD 328


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 178/653 (27%), Positives = 294/653 (45%), Gaps = 77/653 (11%)

Query: 74  RHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADR 133
           R P    V R+  + S    K   EL+ L   LK   +  ++    D    +QFFYW  +
Sbjct: 83  REPFQAIVSRVCAILSRVQWKGSSELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISK 142

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE---------------- 177
           +  Y+H+   +  ML  L + ++   A  +  LM +    CR E                
Sbjct: 143 RPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIK---ACRNEEEIRRVADFLNEISGM 199

Query: 178 AFSY-------LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
            F +       L++  ++   +  A  +   M  + + P+LL  NT I++L    K+ +A
Sbjct: 200 GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 259

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
              L ++    ++P+V TY  LI G+C    +  A  + D M  +GC P+ V+Y T++  
Sbjct: 260 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLING 319

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
           LC E R+ E  D++E+M+                        EEA ELV +M + GC P+
Sbjct: 320 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 379

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V TYTA+++G  R+G+L+ A  +  +M   G  PNTV+Y A +N LC  G+   A ++ +
Sbjct: 380 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 439

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
             E      N  TY+ ++ GL   G + +A  +  +M+K G  PT V  N LI     +G
Sbjct: 440 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 499

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
            ++ A + +      GC  +   +  L+ GF + G LE A     +M  C  +P+ V+YT
Sbjct: 500 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 559

Query: 519 TIIDALSKNGRVE-----------------------------------EATELMMKMLSK 543
           T+ID  SK+G+V+                                   EA ++  KM  +
Sbjct: 560 TLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQ 619

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEE 600
           GL+P V+TY T+I   C+ GR +   K+   M  K+KC      Y+ +I  LC  G  +E
Sbjct: 620 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM-EKRKCLPNLYTYSSLIYGLCQEGKADE 678

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
           A  +L ++ R     D  T   L++ ++  G    A+ +  RM +    P+ +
Sbjct: 679 AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYR 731



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 165/615 (26%), Positives = 278/615 (45%), Gaps = 85/615 (13%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKR-----VLRLMARRGIECRP--EAFSYLMVAYSRAGKL 192
           +P VY   L I   T LC          ++  M +RG  CRP  + ++ L+   SR GKL
Sbjct: 342 EPTVYTYTLPI---TALCAIEHEEEAIELVARMKKRG--CRPNVQTYTALISGLSRLGKL 396

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR-------------------- 232
             A+ +   M K  + PN +  N  I+ L VG + + AL+                    
Sbjct: 397 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 456

Query: 233 ---------------FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
                            E+M   G  P V+TYN LI GY     + +A +L+D M   GC
Sbjct: 457 IKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGC 516

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV----NDSNLFHD--------QGRIEEAKE 325
            PD+ +Y  ++    K  +++      ++MV    N + + +          G+++ A  
Sbjct: 517 EPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALS 576

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+ +M +MGC P+V +Y AV+NG  +     +A+K+  +M   G  PN ++YT  ++GLC
Sbjct: 577 LLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLC 636

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            NG++  A ++ +  E+    PN  TYS +++GL +EGK  EA  +++EM +KG  P  V
Sbjct: 637 RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEV 696

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG------------ 493
               LI      G++D A   ++  ++ GC  N   ++ L++G  ++             
Sbjct: 697 TFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHE 756

Query: 494 ------------DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
                       + E   +LL  M     +P   TY+T++  L + GR  EA +L+  M 
Sbjct: 757 AVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMK 816

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLE 599
            +G  P    Y +++  +C+   V+  LK+   + +K  Q   + Y  +I  LC  G +E
Sbjct: 817 ERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVE 876

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           EA  +   +L     AD     VLV+  L +G   L  K+   M ++N  P+++    + 
Sbjct: 877 EAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILG 936

Query: 660 ERLILEGKSEEADTL 674
             L   GKS E++ L
Sbjct: 937 RELSRIGKSIESEPL 951



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 174/367 (47%), Gaps = 1/367 (0%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y  ++  LSK      A+++   MA +G+      ++ L+    R G+ + A  +   M+
Sbjct: 593 YNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 652

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           K    PNL   ++ I+ L    K  +A   L+ M+  G+ P+ +T+  LI G+  L RI 
Sbjct: 653 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 712

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG-RIEE 322
            A  L+  M   GC P+  +Y  ++  L KE  + E +  ++     S   H++    E 
Sbjct: 713 HAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEI 772

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
              L+ +MS++GC P + TY+ +V+G CR G   +A+++++ M   G  P+   Y + L 
Sbjct: 773 VSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI 832

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
             C N +   A ++ ++ E + +  +   Y  ++  L + G++ EA  +   M++K +  
Sbjct: 833 AHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNA 892

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             +   +L+  L +EG++D   K +    +K    N+  +  L R   + G   E+  L 
Sbjct: 893 DEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLA 952

Query: 503 DDMYLCK 509
           D + + K
Sbjct: 953 DKLKVLK 959


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/553 (28%), Positives = 252/553 (45%), Gaps = 51/553 (9%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLM------ARRGIEC--- 174
           AL+ F+   R+     +P +Y  ++ +L+  KL   A+ ++R +      +RR   C   
Sbjct: 53  ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSV 112

Query: 175 ------------RPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
                        P  F  L++A+S  G +  A++V   M    V P +  CN  +  LV
Sbjct: 113 FNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLV 169

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              +     +    M   G +PNV+TY  LI G C       A +L DEM  K   P  V
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQM 330
            Y  ++  LC E RI E   +   M N   L            +     +++A EL  +M
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              G +P+VVT+  +++G C+  E+  A+K L  M   G  PN   Y   ++G C  G  
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA  + +  E+    P+  TYS+++ GL    ++ EA  +++EM KKGF P  V  N L
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I   C+EG M+ A +   +   KG   N++ F++LI G+C+ G +E A+ L  +M +   
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            PD V YT +ID   K+G  +EA  L  +M   GL P V T   +I   C+ GR+ D +K
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529

Query: 571 LL------------EKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
           L                L +  C      Y  +I+ LC+ G + +A K    +  +  + 
Sbjct: 530 LFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589

Query: 616 DASTCHVLVESYL 628
           D  TC V+++ + 
Sbjct: 590 DVFTCIVIIQGHF 602



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 218/484 (45%), Gaps = 33/484 (6%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           M+L+ L K        +V   M  RG       +  L+    R G    A  +   M + 
Sbjct: 163 MVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEK 222

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            + P ++I    I  L   +++++A      M+ +G+ PN+ TYN ++ GYC +  +K A
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH------- 315
           ++L  EM   G  P+ V++  ++  LCK   +   R  +  M +     N+F        
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342

Query: 316 --DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
               G + EA  L +++ +   +PDV TY+ ++ G C V  +++A  +LQ+M   G  PN
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            V+Y   ++G C  G   +A E+ +   E+   PN IT+S ++ G  + GK+  A  +  
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EMV KG  P  V    LI    ++G    A +  +E    G   NV   + LI G C+ G
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522

Query: 494 DLEEALSLLD---------------DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            + +A+ L                 D  LC   P+ V YT +I  L  +GR+ +A++   
Sbjct: 523 RISDAIKLFLAKTGTDTTGSKTNELDRSLCS--PNHVMYTALIQGLCTDGRIFKASKFFS 580

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYL 598
            M   GL P V T   +I  + +   + D++ L   +L   K     N  +  + + GY 
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADIL---KMGIIPNSSVYRVLAKGY- 636

Query: 599 EEAG 602
           EE+G
Sbjct: 637 EESG 640



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 203/447 (45%), Gaps = 36/447 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           ++Y +++  L        A+ + R M   G+      ++ +M  Y +   ++ A+ +   
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE 288

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + PN++     I  L   +++  A +FL  M   G+ PN+  YNCLI GYC    
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A+ L  E+      PD  +Y  ++  LC   R+                       E
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM-----------------------E 385

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA  L+ +M + G +P+ VTY  +++G+C+ G +++A ++  QM   G +PN ++++  +
Sbjct: 386 EADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLI 445

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G C  GK   A  +      +   P+ + Y+ ++ G  ++G   EA  + +EM + G  
Sbjct: 446 DGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505

Query: 442 PTPVEINLLIQSLCREGKM-DGAKKFMQEC-----------LNKG-CAVNVVNFTSLIRG 488
           P    ++ LI  LC++G++ D  K F+ +            L++  C+ N V +T+LI+G
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQG 565

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C  G + +A     DM      PD  T   II    +   + +   L   +L  G++P 
Sbjct: 566 LCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM 575
              YR +   Y + G ++  L+  E +
Sbjct: 626 SSVYRVLAKGYEESGYLKSALRCSEDL 652



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 178/391 (45%), Gaps = 23/391 (5%)

Query: 300 VRDLMEKMVND------SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
           +RDL++ + N        ++F+   R+E +K   N             +  ++  F  +G
Sbjct: 93  MRDLIQCLQNSRRSRICCSVFNVLSRLESSKFTPN------------VFGVLIIAFSEMG 140

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            +++A   L   Y     P   +    L+GL   G+     ++         +PN +TY 
Sbjct: 141 LVEEA---LWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYG 197

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++ G  R+G   +A  +  EM++K  FPT V   +LI+ LC E ++  A+   +   N 
Sbjct: 198 TLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNS 257

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   N+  + +++ G+C+   +++AL L  +M      P+ VT+  +ID L K   +  A
Sbjct: 258 GMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSA 317

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIEN 591
            + ++ M S G+VP +  Y  +I  YC+ G + + L L  ++   +       Y+ +I+ 
Sbjct: 318 RKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKG 377

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC    +EEA  +L ++ +     +A T + L++ Y  +G    A +V  +M  + + P+
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPN 437

Query: 652 LKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +     + +     GK E A  L    V +G
Sbjct: 438 IITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 167/368 (45%), Gaps = 31/368 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + + ++++ L KT     A++ L  MA  G+   P  F Y  L+  Y +AG L  A+ + 
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVV--PNIFVYNCLIDGYCKAGNLSEALSLH 356

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S ++K  + P++   +  I  L   +++ +A   L+ M+  G  PN +TYN LI GYC  
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------ 313
             ++ AI++  +M  KG  P+ +++ T++   CK  +++    L  +MV    L      
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476

Query: 314 -------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML---- 362
                  F D G  +EA  L  +M + G  P+V T + +++G C+ G +  A K+     
Sbjct: 477 TALIDGHFKD-GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKT 535

Query: 363 ---------QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
                     ++    C PN V YTA + GLC +G+  +A +  +        P+  T  
Sbjct: 536 GTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCI 595

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           V++ G  R   L +   +  +++K G  P      +L +     G +  A +  ++    
Sbjct: 596 VIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGI 655

Query: 474 GCAVNVVN 481
           G   + +N
Sbjct: 656 GIGCSNLN 663



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 130/286 (45%), Gaps = 7/286 (2%)

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           E   +TPN   + V++      G + EA  V  +M      P     N+++  L ++G+ 
Sbjct: 120 ESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRF 174

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D   K   + + +G + NVV + +LI G C++GD  +A  L D+M   K  P  V YT +
Sbjct: 175 DTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTIL 234

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           I  L    R+ EA  +   M + G++P + TY T++  YC++  V+  L+L ++ML    
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGL 294

Query: 581 CR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
                 +  +I+ LC    +  A K L  +       +    + L++ Y   G    A  
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALS 354

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           +   +    ++PD+     + + L    + EEAD L+    ++G +
Sbjct: 355 LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 246/498 (49%), Gaps = 27/498 (5%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  V+  M +R +       + L+ A  RAG +  A+ ++  M    + P ++  N+ + 
Sbjct: 176 ADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLK 235

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    +  KA      M    + P+V ++N LI G+C +  +++A+K   EM  +G +P
Sbjct: 236 GLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTP 295

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D VS+  ++G                       LF  +G+++ A   + +M  +G +PD 
Sbjct: 296 DVVSFSCLIG-----------------------LFSTRGKMDHAAAYLREMKGLGLVPDG 332

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           V YT V+ GFCR G + +A ++  +M   GC P+ V+Y   LNGLC   + L+A E++N 
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNE 392

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
            +E   TP+  T++ ++HG  R+G   +A  +   ++ +   P  V  N LI  +CR+G 
Sbjct: 393 MKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGD 452

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +  A +   +   +    N V ++ LI   C+KG +EEA   LD+M      P+ +TY +
Sbjct: 453 LAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNS 512

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE---DLLKLLEKML 576
           II    ++G V++  + + KM+   ++P ++T+ T+IH Y +   +    ++  ++EK +
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572

Query: 577 SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
            +    T YN +I      G +EEAG++  K+  +  + D  T   L+  ++  G    A
Sbjct: 573 VQPDAVT-YNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEA 631

Query: 637 YKVACRMFNRNLIPDLKL 654
           +++   M +R   PD K 
Sbjct: 632 FQLHDEMMHRGFAPDDKF 649



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 256/536 (47%), Gaps = 34/536 (6%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG--KLRNAMYV 198
           P V+ +++   ++++  + A    RL+    +     A + L+ A SRAG   L    Y 
Sbjct: 87  PQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEAYR 146

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L +   + V  N    N  +H      +  KA   +  M+   + P+V+T+N LI     
Sbjct: 147 LVLSSDSEV--NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
              +  AI L+D M  KG  P  V++ +V+  LCK +R                      
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRF--------------------- 243

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
             ++AKE+   M Q    PDV ++  ++ GFCRVGE+++A K  ++M   G  P+ VS++
Sbjct: 244 --DKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFS 301

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             +      GK   A   +   +     P+ + Y++V+ G  R G +SEA  V  EMV  
Sbjct: 302 CLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGL 361

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  V  N L+  LC++ ++  A++ + E   +G   ++  FT+LI G+C+ G+ E+A
Sbjct: 362 GCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKA 421

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L L D +   +  PD V Y ++ID + + G + +A EL   M ++ + P  VTY  +I  
Sbjct: 422 LQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDS 481

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           +C+ G+VE+    L++M+SK        YN +I+  C  G +++  + L K+++     D
Sbjct: 482 HCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
             T + L+  Y+ +     A+ V   M    + PD      V+  +I+ G SE+ +
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPD-----AVTYNMIINGFSEQGN 592



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 148/305 (48%), Gaps = 8/305 (2%)

Query: 376 SYTAFLNGLCHNG-KSLE---AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           +YT  LN + H+  KSLE   A  +I+  E+    P+ +T++V++    R G +  A  +
Sbjct: 157 AYT--LNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIAL 214

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           V  M  KG  P  V  N +++ LC+  + D AK+  +       A +V +F  LI GFC+
Sbjct: 215 VDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCR 274

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G++EEA+    +M      PD V+++ +I   S  G+++ A   + +M   GLVP  V 
Sbjct: 275 VGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVI 334

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y  VI  +C+ G + + L++ ++M  L        YN ++  LC    L +A ++L ++ 
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMK 394

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
                 D  T   L+  Y   G    A ++   + ++ L PD+     + + +  +G   
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLA 454

Query: 670 EADTL 674
           +A+ L
Sbjct: 455 KANEL 459


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 162/610 (26%), Positives = 286/610 (46%), Gaps = 51/610 (8%)

Query: 63  IRRVVLEEDEFRHPLVREVCRLIEL---RSAWSPKL---EGELRNLLRSLKPRQICAVLR 116
           +RR++  ED      +    RL+EL   R   +P +      +RNL R  +      VLR
Sbjct: 46  LRRLIARED------LAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLR 99

Query: 117 SQADERVALQFFYW---ADRQWRYRH---------------DPIVYYMMLEILSKTKLCQ 158
           +       +  F +        RY H               D   Y  ++ +L       
Sbjct: 100 AAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVA 159

Query: 159 GAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
            A  +L  M RRG  C+P   +Y  L+ A  +      AM VL  M+     PN++  N 
Sbjct: 160 DALSLLDDMLRRG--CQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNV 217

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            I+ +    ++  A   L R+   G  P+ ++Y  L+KG C   R  D  +L  EM  K 
Sbjct: 218 IINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN 277

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAK 324
           C P++V++  ++ + C+   ++    ++++M                N    QGR+++A 
Sbjct: 278 CMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAF 337

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           + +N M   GC PD ++YT V+ G CR    + AK++L++M  + C PN V++  F+  L
Sbjct: 338 KFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICIL 397

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  G   +A  +I   +E   T   +TY+ +++G   +G +  A ++ R M  K   P  
Sbjct: 398 CQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNT 454

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           +    L+  LC   ++D A + + E L++ C  NVV F  L+  FCQKG L+EA+ L++ 
Sbjct: 455 ITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQ 514

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      P+ +TY T+ D ++K+   E+A EL+  ++SKG+ P V+T+ ++I    +  R
Sbjct: 515 MMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDR 574

Query: 565 VEDLLKL--LEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           VE+ +++  L + +  +     YN+++  LC    ++ A   L  ++      + ST  +
Sbjct: 575 VEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYII 634

Query: 623 LVESYLNKGI 632
           L+E    +G+
Sbjct: 635 LIEGLAREGL 644



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 143/526 (27%), Positives = 260/526 (49%), Gaps = 30/526 (5%)

Query: 159 GAKRVLRLMARRGIECRPEAF--SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
           GA R++ L A R  E  P+ +  + L+    R G+  +A  VL   + +    ++   NT
Sbjct: 57  GAARLVELSASRDGE-APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNT 115

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            +        L  A R +  M +A   P+  TY  LI+  CD  R+ DA+ L+D+M  +G
Sbjct: 116 LVAGYCRYGHLDAARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRG 172

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI 336
           C P+ V+Y  ++  +CK                           E+A  ++++M   GC 
Sbjct: 173 CQPNVVTYTVLLEAMCK-----------------------NSGFEQAMAVLDEMRAKGCT 209

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P++VTY  ++NG CR G +D A+ +L +++ +GC+P+TVSYT  L GLC + +  +  E+
Sbjct: 210 PNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEEL 269

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
                E+   PN +T+ +++    R G +  A  V+++M +          N++I S+C+
Sbjct: 270 FAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICK 329

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           +G++D A KF+    + GC  + +++T++++G C+     +A  LL +M      P+ VT
Sbjct: 330 QGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVT 389

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           + T I  L + G +E+A  L+ +M   G    VVTY  +++ +C  G ++  L+L   M 
Sbjct: 390 FNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP 449

Query: 577 SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
            K    T Y  ++  LC+   L+ A +++ ++L      +  T +VLV  +  KG    A
Sbjct: 450 CKPNTIT-YTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEA 508

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            ++  +M      P+L     + + +  +  SE+A  L+   V +G
Sbjct: 509 IELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKG 554



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 209/431 (48%), Gaps = 21/431 (4%)

Query: 132 DRQWRY--RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYS 187
           +R + Y  + D + Y  +L+ L  +K     + +   M  +   C P    F  L+  + 
Sbjct: 236 NRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK--NCMPNEVTFDMLIRFFC 293

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G +  A+ VL  M +   A N  +CN  I+ +    ++  A +FL  M   G  P+ +
Sbjct: 294 RGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTI 353

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           +Y  ++KG C   R  DA +L+ EM    C P++V++ T +  LC++  I++   L+E+M
Sbjct: 354 SYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQM 413

Query: 308 VNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                           N F  QG I+ A EL   M    C P+ +TYT ++ G C    L
Sbjct: 414 QEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERL 470

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D A +++ +M H  C PN V++   +N  C  G   EA E++    E   TPN ITY+ +
Sbjct: 471 DAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTL 530

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
             G+ ++    +A +++  +V KG  P  +  + +I  L +E +++ A +      + G 
Sbjct: 531 FDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGM 590

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
               + +  ++ G C++ +++ A+  L  M      P+  TY  +I+ L++ G ++EA +
Sbjct: 591 RPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQD 650

Query: 536 LMMKMLSKGLV 546
           L+  + S+G+V
Sbjct: 651 LLSMLCSRGVV 661


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 150/502 (29%), Positives = 249/502 (49%), Gaps = 27/502 (5%)

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           L K K    A  + + M  +GIE      + L+  +   G++  +  VL  + K    PN
Sbjct: 20  LVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPN 79

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
            +  NT +  L +  ++ K+L F +++   G   + ++Y  L+ G C +   + A+KL+ 
Sbjct: 80  TITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLR 139

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQM 330
            +  +   P+ V Y T++  LCK+K + E  DL                        ++M
Sbjct: 140 MIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDL-----------------------YSEM 176

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              G  P+V+TY+ ++ GFC  G+L +A  +L +M      PN  +YT  ++ LC  GK 
Sbjct: 177 DARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKV 236

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA+ ++    +E   PN ++Y+ +M G    G++  A  +   MV+KG  P     N++
Sbjct: 237 KEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIM 296

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I  LC+  ++D A   ++E L+K    N V ++SLI GFC+ G +  AL LL +MY   +
Sbjct: 297 IDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQ 356

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
             D VTYT+++DAL KN  +++AT L MKM  +G+ P   TY  +I   C+ GR ++  K
Sbjct: 357 PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQK 416

Query: 571 LLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           L + +L K  CR     YN +I  LC  G L+EA  +  K+       DA T  +++ S 
Sbjct: 417 LFQHLLVK-GCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSL 475

Query: 628 LNKGIPLLAYKVACRMFNRNLI 649
             K     A K+   M  ++L+
Sbjct: 476 FEKDQNDKAEKLLHEMIAKDLL 497



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 206/413 (49%), Gaps = 23/413 (5%)

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           +G +    +++ L+    + G+ R+A+ +L M++  +  PN+++ NT I  L     + +
Sbjct: 109 QGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNE 168

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A      M   GI PNV+TY+ LI G+C   ++ +A  L++EM LK  +P+  +Y  +M 
Sbjct: 169 AYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMD 228

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            LCKE                       G+++EAK L+  M++ G  P+VV+Y  +++G+
Sbjct: 229 ALCKE-----------------------GKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGY 265

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C +GE+  AK+M   M   G  PN  SY   ++ LC + +  EA  ++     +   PN 
Sbjct: 266 CLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNT 325

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           +TYS ++ G  + G+++ A D+++EM  +G     V    L+ +LC+   +D A     +
Sbjct: 326 VTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 385

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              +G   N   +T+LI G C+ G  + A  L   + +     +  TY  +I  L K G 
Sbjct: 386 MKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGM 445

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
           ++EA  +  KM   G +P  VT+  +I    +  + +   KLL +M++K   R
Sbjct: 446 LDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLR 498



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 200/412 (48%), Gaps = 27/412 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA-GKLRNA 195
           ++ D + Y  +L  L K    + A ++LR++  R    RP    Y  +       KL N 
Sbjct: 111 FQMDQVSYATLLNGLCKIGETRSALKLLRMIEDR--STRPNVVMYNTIIDGLCKDKLVNE 168

Query: 196 MYVL-SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
            Y L S M    + PN++  +T I+   +  +L +A   L  M L  I PNV TY  L+ 
Sbjct: 169 AYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMD 228

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
             C   ++K+A  L+  M  +G  P+ VSY T+M   C                      
Sbjct: 229 ALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCL--------------------- 267

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G ++ AK++ + M Q G  P+V +Y  +++  C+   +D+A  +L+++ H    PNT
Sbjct: 268 --IGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNT 325

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y++ ++G C  G+   A +++          + +TY+ ++  L +   L +A  +  +
Sbjct: 326 VTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 385

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M ++G  P       LI  LC+ G+   A+K  Q  L KGC +NV  +  +I G C++G 
Sbjct: 386 MKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGM 445

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           L+EAL++   M      PD VT+  II +L +  + ++A +L+ +M++K L+
Sbjct: 446 LDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 187/366 (51%), Gaps = 3/366 (0%)

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A  L  QM   G  PD+ T   ++N FC +G++  +  +L ++   G +PNT++    + 
Sbjct: 29  AISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMK 88

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC  G+  ++    +    + +  + ++Y+ +++GL + G+   A  ++R +  +   P
Sbjct: 89  GLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRP 148

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V  N +I  LC++  ++ A     E   +G   NV+ +++LI GFC  G L EA  LL
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLL 208

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           ++M L   +P+  TYT ++DAL K G+V+EA  L+  M  +G+ P VV+Y T++  YC +
Sbjct: 209 NEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLI 268

Query: 563 GRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           G V++  ++   M+ K       +YN +I+ LC    ++EA  +L +VL      +  T 
Sbjct: 269 GEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTY 328

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
             L++ +   G    A  +   M++R    D+     + + L      ++A  L ++  E
Sbjct: 329 SSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 388

Query: 681 RGHIQP 686
           RG IQP
Sbjct: 389 RG-IQP 393



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 143/320 (44%), Gaps = 38/320 (11%)

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           TP  + ++ ++  L +      A  + ++M  KG  P    +N+LI   C  G+M  +  
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY-----------------LC 508
            + + L  G   N +   +L++G C KG+++++L   D +                  LC
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 509 K------------------KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           K                    P+ V Y TIID L K+  V EA +L  +M ++G+ P V+
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVI--ENLCSFGYLEEAGKILGKV 608
           TY T+I+ +C  G++ +   LL +M+ K      Y   I  + LC  G ++EA  +L  +
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
            +   K +  + + L++ Y   G    A ++   M  + + P++     + +RL    + 
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRV 306

Query: 669 EEADTLMLRFVERGHIQPKS 688
           +EA  L LR V   ++ P +
Sbjct: 307 DEAMNL-LREVLHKNMVPNT 325



 Score = 39.7 bits (91), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 2/180 (1%)

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M L +  P  + +  I+ +L K      A  L  +M  KG+ P + T   +I+ +C +G+
Sbjct: 1   MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 565 VEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           +     +L K+  L  Q      N +++ LC  G ++++     KV+    + D  +   
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L+      G    A K+   + +R+  P++ +   + + L  +    EA  L      RG
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 262/521 (50%), Gaps = 20/521 (3%)

Query: 126 QFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA 185
           + F    +   Y+   + +Y ++E  + +   +  + VL  M R       + F  +  A
Sbjct: 46  EIFKSGTQMGSYKLGDLSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKA 105

Query: 186 YSRAGKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA---G 241
           Y +A     A+ +   M  +      +   N+ ++V+V      +AL F   +  +    
Sbjct: 106 YGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLN 165

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I PN LT+N +IK  C L  +  AI++  E+PL+ C+PD  +Y T+M  LCKE+RI E  
Sbjct: 166 IHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAV 225

Query: 302 DLMEKMVNDSNLFH------------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            L+++M  +    +             +G +  A +LV+ M   GC+P+ VTY A+V+G 
Sbjct: 226 SLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGL 285

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C  G+L++A  +L QM  + C PN V++   +NG    G++ +   ++ + E      N 
Sbjct: 286 CLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNE 345

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
             YS ++ GL +EGK ++A ++ +EMV KG  P  +  + LI  LCREGK+D A+ F+ E
Sbjct: 346 YVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSE 405

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
             NKG   N   ++SL+RG+ + GD  +A+ +  +M       + V Y+ +I+ L K+G+
Sbjct: 406 MKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGK 465

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK----QKCRTAY 585
             EA  +  +MLS+G+   VV Y ++IH +C    VE  LKL  +ML +    Q     Y
Sbjct: 466 FMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITY 525

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           N ++   C    +  A  IL  +L      D  TC + +++
Sbjct: 526 NILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKT 566



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 215/469 (45%), Gaps = 72/469 (15%)

Query: 165 RLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
            ++A + +   P A ++ +V  A  R G +  A+ V   +     AP+    +T +H L 
Sbjct: 157 HVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLC 216

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              ++ +A+  L+ MQ+ G  PN++ +N LI   C    +  A KL+D M LKGC P++V
Sbjct: 217 KEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEV 276

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQM 330
           +Y  ++  LC + ++++   L+ +MV++             N F  QGR  +   ++  +
Sbjct: 277 TYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSL 336

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              G   +   Y+++++G C+ G+ +QA ++ ++M   GC PNT+ Y+A ++GLC  GK 
Sbjct: 337 EARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKL 396

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EAR  ++  + + + PN+ TYS +M G    G   +A  V +EM         V  ++L
Sbjct: 397 DEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSIL 456

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS-------------------------- 484
           I  LC++GK   A    ++ L++G  ++VV ++S                          
Sbjct: 457 INGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGP 516

Query: 485 -----------LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN------ 527
                      L+  FC +  +  A+ +L+ M     DPD +T    +  L +N      
Sbjct: 517 VVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQD 576

Query: 528 ---------------GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
                           R   A++++  M+ K L+P   T+  V+ + C+
Sbjct: 577 GREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCK 625



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 156/318 (49%), Gaps = 4/318 (1%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G +++A E+  ++    C PD  TY+ +++G C+   +D+A  +L +M   G  PN V++
Sbjct: 184 GLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAF 243

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              ++ LC  G    A ++++    +   PN +TY+ ++HGL  +GKL +A  ++ +MV 
Sbjct: 244 NVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVS 303

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
               P  V    LI     +G+     + +     +G   N   ++SLI G C++G   +
Sbjct: 304 NKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQ 363

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A+ L  +M      P+T+ Y+ +ID L + G+++EA   + +M +KG +P   TY +++ 
Sbjct: 364 AMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMR 423

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
            Y + G     + L+ K ++   C      Y+ +I  LC  G   EA  +  ++L    K
Sbjct: 424 GYFEAGDSHKAI-LVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIK 482

Query: 615 ADASTCHVLVESYLNKGI 632
            D      ++  + N  +
Sbjct: 483 LDVVAYSSMIHGFCNANL 500



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 199/423 (47%), Gaps = 26/423 (6%)

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI------------EEAKELVNQ 329
           +S+Y+++         + + +++ +M  +  +F ++  I            E+A +L ++
Sbjct: 62  LSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHR 121

Query: 330 M-SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH-------GCKPNTVSYTAFL 381
           M  +  C   V ++ +V+N   + G  ++A     + Y+H          PN +++   +
Sbjct: 122 MWGEFQCKQTVKSFNSVLNVIVQEGLFNRA----LEFYNHVVASKSLNIHPNALTFNLVI 177

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
             +C  G   +A E+          P+  TYS +MHGL +E ++ EA  ++ EM  +G F
Sbjct: 178 KAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTF 237

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N+LI +LC++G +  A K +     KGC  N V + +L+ G C KG LE+A+SL
Sbjct: 238 PNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSL 297

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L+ M   K  P+ VT+ T+I+     GR  + T +++ + ++G       Y ++I   C+
Sbjct: 298 LNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCK 357

Query: 562 VGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G+    ++L ++M+ K        Y+ +I+ LC  G L+EA   L ++       ++ T
Sbjct: 358 EGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFT 417

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
              L+  Y   G    A  V   M N N I +      +   L  +GK  EA  +  + +
Sbjct: 418 YSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQML 477

Query: 680 ERG 682
            RG
Sbjct: 478 SRG 480



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 143/329 (43%), Gaps = 33/329 (10%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
             RVL  +  RG       +S L+    + GK   AM +   M      PN ++ +  I 
Sbjct: 329 GTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALID 388

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    KL +A  FL  M+  G  PN  TY+ L++GY +      AI +  EM    C  
Sbjct: 389 GLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIH 448

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFH---DQGRIEEAKELV 327
           ++V Y  ++  LCK+ +  E   + ++M         V  S++ H   +   +E+  +L 
Sbjct: 449 NEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLF 508

Query: 328 NQMSQMGCI--PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           NQM   G +  PDV+TY  ++N FC    + +A  +L  M   GC P+ ++   FL  L 
Sbjct: 509 NQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLR 568

Query: 386 HN-GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
            N     + RE ++               +V+  ++R+  +  A  ++  M+ K   P  
Sbjct: 569 ENMNPPQDGREFLD--------------ELVVRLVKRQRTIG-ASKIIEVMMHKFLLPKA 613

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNK 473
               +++Q +C   K    +K + EC ++
Sbjct: 614 STWAMVVQQVC---KPKNVRKAISECWSR 639



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 98/214 (45%), Gaps = 5/214 (2%)

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK---DPDTVTYTTIIDALSKNGRVE 531
           C   V +F S++    Q+G    AL   + +   K     P+ +T+  +I A+ + G V+
Sbjct: 128 CKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVD 187

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVI 589
           +A E+  ++  +   P   TY T++H  C+  R+++ + LL++M  +       A+N +I
Sbjct: 188 KAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLI 247

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
             LC  G L  A K++  +       +  T + LV     KG    A  +  +M +   +
Sbjct: 248 SALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCV 307

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           P+      +    +++G++ +   +++    RGH
Sbjct: 308 PNDVTFGTLINGFVMQGRASDGTRVLVSLEARGH 341


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 148/512 (28%), Positives = 262/512 (51%), Gaps = 38/512 (7%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G+L +    L  M      P+++ C + I       K  KA   +E ++ +G  P+V+
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN LI GYC    I +A++++D M +   +PD V+Y T++  LC               
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRMNV---APDVVTYNTILRTLC--------------- 227

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                   D G++++A E++++  Q  C PDV+TYT ++   C+   + QA K+L +M +
Sbjct: 228 --------DSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRN 279

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G KP+ V+Y   +NG+C  G+  EA + +N        PN IT+++++  +   G+  +
Sbjct: 280 KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD 339

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++ +M++KG  P+ V  N+LI  LCR+G +  A   +++    GC  N +++  L+ 
Sbjct: 340 AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 399

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC++  ++ A+  LD M      PD VTY T++ AL K+G+V+ A E++ ++ SKG  P
Sbjct: 400 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 459

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            ++TY TVI    +VG+ E  +KLL++M  K  +     Y+ ++  L   G ++EA K  
Sbjct: 460 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 519

Query: 606 GKVLRTASKADASTCHVLV-----ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
             +     + +A T + ++         ++ I  LAY     M ++   P       + E
Sbjct: 520 HDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY-----MISKRCKPTEATYTILIE 574

Query: 661 RLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
            +  EG ++EA  L+     RG ++  S E +
Sbjct: 575 GIAYEGLAKEALDLLNELCSRGLVKKSSAEQV 606



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 210/421 (49%), Gaps = 19/421 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D I Y +++    K+     A +VL  M        P+  +Y  ++     +GKL+ AM 
Sbjct: 183 DVITYNVLISGYCKSGEIDNALQVLDRM-----NVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL    +    P+++     I      + + +A++ L+ M+  G  P+V+TYN LI G C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              R+ +AIK ++ MP  GC P+ +++  ++  +C   R  +   L+  M+         
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 N    QG +  A +++ +M   GC P+ ++Y  +++GFC+  ++D+A + L  M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              GC P+ V+Y   L  LC +GK   A E++N    +  +P  ITY+ V+ GL + GK 
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 477

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             A  ++ EM +KG  P  +  + L+  L REGK+D A KF  +    G   N + + S+
Sbjct: 478 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 537

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           + G C+    + A+  L  M   +  P   TYT +I+ ++  G  +EA +L+ ++ S+GL
Sbjct: 538 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597

Query: 546 V 546
           V
Sbjct: 598 V 598



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 119/236 (50%), Gaps = 5/236 (2%)

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L R G+L +    +  MV +G  P  +    LI+  CR GK   A   M+     G   +
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           V+ +  LI G+C+ G+++ AL +LD M +    PD VTY TI+  L  +G++++A E++ 
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
           + L K   P V+TY  +I   C+   V   +KLL++M +K  +     YN +I  +C  G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
            L+EA K L  +     + +  T ++++ S  + G  + A K+   M  +   P +
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 356



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 119/235 (50%), Gaps = 7/235 (2%)

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           ++ L R G+++   KF++  + +G   +++  TSLIRGFC+ G  ++A  +++ +     
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            PD +TY  +I    K+G ++ A +++ +M    + P VVTY T++   C  G+++  ++
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 571 LLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           +L++ L K+ C      Y  +IE  C    + +A K+L ++    SK D  T +VL+   
Sbjct: 238 VLDRQLQKE-CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 296

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             +G    A K    M +    P++     +   +   G+  +A+ L+   + +G
Sbjct: 297 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 351


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 249/481 (51%), Gaps = 52/481 (10%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R+G    ++++L  M +    P++++C   I        + KA+R +E ++  G  P+V 
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            YN LI G+C ++RI DA +++D M  K  SPD V+Y  ++G LC   ++     ++ ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 308 VNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           ++D+                 +G ++EA +L+++M   G  PD+ TY  ++ G C+ G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D+A +M++ +   GC+P+ +SY   L  L + GK  E  +++     E   PN +TYS++
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +  L R+GK+ EA ++++ M +KG  P     + LI + CREG++D A +F++  ++ GC
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLD-------------------------------- 503
             ++VN+ +++   C+ G  ++AL +                                  
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 504 ---DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
              +M     DPD +TY ++I  L + G V+EA EL++ M S    P+VVTY  V+  +C
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519

Query: 561 QVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           +  R+ED + +LE M+    CR   T Y  +IE +   GY  EA ++   ++R  + ++ 
Sbjct: 520 KAHRIEDAINVLESMVG-NGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEY 578

Query: 618 S 618
           S
Sbjct: 579 S 579



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 197/409 (48%), Gaps = 12/409 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++    K      A RVL  M  +        ++ ++ +    GKL  A+ VL
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + +      P ++     I   ++   + +AL+ ++ M   G+ P++ TYN +I+G C  
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNLFH- 315
             +  A +++  + LKGC PD +SY  ++  L  + + +E   LM KM +   D N+   
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336

Query: 316 --------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     G+IEEA  L+  M + G  PD  +Y  ++  FCR G LD A + L+ M  
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+ V+Y   L  LC NGK+ +A E+     E   +PN+ +Y+ +   L   G    
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++ EM+  G  P  +  N +I  LCREG +D A + + +  +     +VV +  ++ 
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
           GFC+   +E+A+++L+ M      P+  TYT +I+ +   G   EA EL
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 180/343 (52%), Gaps = 4/343 (1%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PDV  Y A++NGFC++  +D A ++L +M      P+TV+Y   +  LC  GK   A ++
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +N    +   P  ITY++++     EG + EA  ++ EM+ +G  P     N +I+ +C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           EG +D A + ++    KGC  +V+++  L+R    +G  EE   L+  M+  K DP+ VT
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y+ +I  L ++G++EEA  L+  M  KGL P   +Y  +I  +C+ GR++  ++ LE M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 577 SKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           S   C      YN V+  LC  G  ++A +I GK+       ++S+ + +  +  + G  
Sbjct: 396 S-DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
           + A  +   M +  + PD      +   L  EG  +EA  L++
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 148/314 (47%), Gaps = 16/314 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           + D   Y  ++  + K  +   A  ++R +  +G  C P+  SY  L+ A    GK    
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG--CEPDVISYNILLRALLNQGKWEEG 317

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +++ M      PN++  +  I  L    K+ +A+  L+ M+  G+TP+  +Y+ LI  
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------VN 309
           +C   R+  AI+ ++ M   GC PD V+Y TV+  LCK  +  +  ++  K+       N
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437

Query: 310 DSNL------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            S+           G    A  ++ +M   G  PD +TY ++++  CR G +D+A ++L 
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M      P+ V+Y   L G C   +  +A  ++ +       PN  TY+V++ G+   G
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557

Query: 424 KLSEACDVVREMVK 437
             +EA ++  ++V+
Sbjct: 558 YRAEAMELANDLVR 571



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 137/270 (50%), Gaps = 3/270 (1%)

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           + H   R G   E+  ++  MV+KG+ P  +    LI+       +  A + M E L K 
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              +V  + +LI GFC+   +++A  +LD M      PDTVTY  +I +L   G+++ A 
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
           +++ ++LS    PTV+TY  +I      G V++ LKL+++MLS+  +     YN +I  +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G ++ A +++  +     + D  + ++L+ + LN+G      K+  +MF+    P++
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
                +   L  +GK EEA  L+    E+G
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKG 363



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 5/270 (1%)

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C +G  +E+  ++ T   + + P+ I  + ++ G      + +A  V+ E+++K   P  
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
              N LI   C+  ++D A + +    +K  + + V +  +I   C +G L+ AL +L+ 
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           +      P  +TYT +I+A    G V+EA +LM +MLS+GL P + TY T+I   C+ G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 565 VEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           V+   +++   L  + C     +YN ++  L + G  EE  K++ K+       +  T  
Sbjct: 279 VDRAFEMVRN-LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           +L+ +    G    A  +   M  + L PD
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 241/487 (49%), Gaps = 16/487 (3%)

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM-----YVLSMMQKAAVAPNLLI 213
           G +  L+ M  RG+ C   A    + A++RAG    A+      V  +       P L  
Sbjct: 73  GVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTEPRLY- 131

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
            N  I  L+  N +   +   + M+  G+ PNV TYN L++  C  +R+  A K++DEM 
Sbjct: 132 -NHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA 190

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------QGRIEEAKEL 326
            KGC PD V+Y T++  LCK  R+ E  +++  M   +  ++        + R++E   +
Sbjct: 191 RKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSV 250

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           V+ M   G  P+V+TYT +V+ FC+ GEL  A  +L +M   GC PN V++TA + GL  
Sbjct: 251 VSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFD 310

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
           +G+  +A +M      E W P+ ++Y++++ GL   G L  A  ++  M + G FP    
Sbjct: 311 DGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRT 370

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            + LI    + G + GA     +    GC  NVV +T+++  FC+K    +A SL+D M 
Sbjct: 371 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 430

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
           L    P+TVT+ T+I +L    RV  A  +  +M   G VP   TY  +IH   + G   
Sbjct: 431 LENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 490

Query: 567 DLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           D L ++ +M S   +     YN V+  LC      EA   +GK++    + +A T   ++
Sbjct: 491 DALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAII 550

Query: 625 ESYLNKG 631
            +Y  +G
Sbjct: 551 HAYCKEG 557



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 202/431 (46%), Gaps = 21/431 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  ++ +L K      A  VL  M        P A SY  +++A  R  +++    
Sbjct: 197 DDVTYATIVSVLCKLDRLDEATEVLAAMP-------PVAASYNAIVLALCREFRMQEVFS 249

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V+S M    + PN++   T +       +L  A   L RM + G TPNV+T+  L++G  
Sbjct: 250 VVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLF 309

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
           D  R+ DA+ +   M  +G +P  VSY  ++  LC    +K    ++  M          
Sbjct: 310 DDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVR 369

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 + F   G +  A  + N MS+ GC P+VV YT +V+ FC+    +QAK ++ +M
Sbjct: 370 TYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKM 429

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
               C PNTV++   +  LC   +   A  + +        PN  TY+ ++HGL REG  
Sbjct: 430 LLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNC 489

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A  +V EM   G   + V  N ++  LC+      A  F+ + + +G   N   F+++
Sbjct: 490 GDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAI 549

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I  +C++G++  A  +L  M +     + + YT ++  L    ++ +A   ++KML +G+
Sbjct: 550 IHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGI 609

Query: 546 VPTVVTYRTVI 556
            P  VT+  ++
Sbjct: 610 YPNTVTWNVLV 620



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 153/330 (46%), Gaps = 15/330 (4%)

Query: 120 DERV--ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           D RV  AL  + W   +  +    + Y +++  L      +GA  +L  M + G      
Sbjct: 311 DGRVHDALDMWRWMVAE-GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVR 369

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            +S L+  +S+AG L  A+ + + M ++   PN+++    + V        +A   +++M
Sbjct: 370 TYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKM 429

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
            L    PN +T+N LI+  CD  R+  A+ +  EM   GC P+  +Y  ++  L +E   
Sbjct: 430 LLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNC 489

Query: 298 KEVRDLMEKM----VNDSNLFHD-------QGRIE-EAKELVNQMSQMGCIPDVVTYTAV 345
            +   ++ +M    +  S + ++       Q R+  EA   V +M   G  P+  T++A+
Sbjct: 490 GDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAI 549

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++ +C+ GE+  A  ML  M    C  N + YT  +  LC+  K ++A   +     E  
Sbjct: 550 IHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGI 609

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREM 435
            PN +T++V++ G+ R     E  D ++ +
Sbjct: 610 YPNTVTWNVLVRGVFRNLGCIEPSDFIQHI 639



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 98/239 (41%), Gaps = 14/239 (5%)

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL----LDDMY 506
           ++ L   G +DG +  +QE   +G         + +  F + G  + AL      + D+ 
Sbjct: 62  VRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLG 121

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
            C +  +   Y  +IDAL +   V     +   M   G+ P V TY  ++   CQ  RV 
Sbjct: 122 -CARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVG 180

Query: 567 DLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
              K+L++M +++ C      Y  ++  LC    L+EA ++L  +   A+  +A    + 
Sbjct: 181 AARKMLDEM-ARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALC 239

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            E  + +      + V   M  R L P++     + +     G+   A  ++ R V  G
Sbjct: 240 REFRMQE-----VFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITG 293


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 159/544 (29%), Positives = 262/544 (48%), Gaps = 17/544 (3%)

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM-----YVLSMMQKAAVAPNLLI 213
           G +  L+ M  RG+ C   A    + A++RAG    A+      V  +      AP L  
Sbjct: 79  GVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTAPRLY- 137

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
            N  I  L+  N +         M+  G+ PNV TYN L++  C  HR+  A K++DEM 
Sbjct: 138 -NHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMA 196

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------QGRIEEAKEL 326
            KGC PD V+Y T++  LC   R+ E  +++      +  ++        + R++E   +
Sbjct: 197 TKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNAVILALCREFRMQEVFAV 256

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           V  M   G  P+V+TYT +VN FC+ GEL  A  +L +M   GC PN  ++TA + GL +
Sbjct: 257 VGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFN 316

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
           +G+  +A +M      E W P+ ++Y+V++ GL   G L  A  V+ +M + G FP    
Sbjct: 317 DGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNART 376

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            + LI    + G +DGA     +    GC  NVV +T+++  FC+K    +A SL+D M 
Sbjct: 377 YSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKML 436

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
           +    P+TVT+ T+I +L    RV  A  +  +M   G  P   TY  ++H   + G   
Sbjct: 437 VENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCG 496

Query: 567 DLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           D L+++ +M +   +     YN V+  LC      EA   +G+++    + DA T   ++
Sbjct: 497 DALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAII 556

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
            +Y  +G   +A  +   M   N   ++ +   +   L  + K E+A   +L+ +  G I
Sbjct: 557 HAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEG-I 615

Query: 685 QPKS 688
            P +
Sbjct: 616 YPNT 619



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 189/395 (47%), Gaps = 14/395 (3%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P A SY  +++A  R  +++    V+  M    + PN++   T ++      +L  A   
Sbjct: 232 PVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAI 291

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           L RM + G TPNV T+  L+ G  +  R+ DA+ +   M  +G +P  VSY  ++  LC 
Sbjct: 292 LARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCS 351

Query: 294 EKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
              +K    ++  M                + F   G ++ A  + N M++ GC P+VV 
Sbjct: 352 VGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVV 411

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           YT +V  FC+    +QA+ ++ +M    C PNTV++   +  LC+  +   A  + +   
Sbjct: 412 YTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMR 471

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                PN  TY+ ++HGL REG   +A  +V EM   G   + V  N ++  LC+     
Sbjct: 472 RHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGR 531

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A  F+   + +G   +   FT++I  +C++G++  A  +L  M +     + + YT ++
Sbjct: 532 EAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILM 591

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
             L    ++E+A   ++KML +G+ P  VT+  ++
Sbjct: 592 AELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLV 626



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 169/373 (45%), Gaps = 12/373 (3%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  RG++     ++ ++ A+ +AG+LR A  +L+ M      PN+      +  L    +
Sbjct: 260 MVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGR 319

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +  AL   + M   G  P+ ++YN LI+G C +  +K A  ++++M   GC P+  +Y T
Sbjct: 320 VHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYST 379

Query: 287 VMGYLCKEKRIKEVRDLMEKMV------------NDSNLFHDQGRIEEAKELVNQMSQMG 334
           ++    K   +     +   M             N   +F  +    +A+ L+++M    
Sbjct: 380 LIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVEN 439

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C P+ VT+  ++   C    + +A  +  +M  HGC PN  +Y   L+GL   G   +A 
Sbjct: 440 CPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDAL 499

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +M+   +      + +TY+ V+ GL +     EA   V  M+ +G  P       +I + 
Sbjct: 500 QMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAY 559

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+EG++  A   +       C  N++ +T L+   C +  LE+A+  L  M      P+T
Sbjct: 560 CKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNT 619

Query: 515 VTYTTIIDALSKN 527
           VT+  ++  + +N
Sbjct: 620 VTWNVLVRGVFRN 632



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 151/330 (45%), Gaps = 27/330 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRNAMYVL 199
           + Y +++  L      +GA  VL  M + G  C P A  +S L+  +S+AG L  A+ + 
Sbjct: 340 VSYNVLIRGLCSVGDLKGASSVLNDMEQHG--CFPNARTYSTLIDGFSKAGDLDGAISIW 397

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M ++   PN+++    + V        +A   +++M +    PN +T+N LI+  C+ 
Sbjct: 398 NDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNC 457

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R+  A+ +  EM   GC P+  +Y  ++  L +E                       G 
Sbjct: 458 RRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFRE-----------------------GN 494

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
             +A ++V +M   G    +VTY  VV+G C++    +A   + +M   G +P+  ++TA
Sbjct: 495 CGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTA 554

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++  C  G+   A  ++          N + Y+++M  L  + KL +A   + +M+ +G
Sbjct: 555 IIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEG 614

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            +P  V  N+L++ + R    +    F+Q 
Sbjct: 615 IYPNTVTWNVLVRGVFRNLGCNNPSDFIQH 644



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 41/259 (15%)

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS---------- 500
           ++ L   G +DG +  +QE   +G         + +  F + G  + AL           
Sbjct: 68  VRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLG 127

Query: 501 ------------LLDDM----------YLC---KKD---PDTVTYTTIIDALSKNGRVEE 532
                       L+D +           +C   +KD   P+  TY  ++ AL +N RV  
Sbjct: 128 CARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGA 187

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENL 592
           A +++ +M +KG  P  VTY T++   C +GRV++  ++L    +      +YN VI  L
Sbjct: 188 ARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLS---AAPPVAASYNAVILAL 244

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C    ++E   ++G ++    + +  T   +V ++   G   +A  +  RM      P++
Sbjct: 245 CREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNV 304

Query: 653 KLCKKVSERLILEGKSEEA 671
                +   L  +G+  +A
Sbjct: 305 ATFTALVGGLFNDGRVHDA 323



 Score = 39.7 bits (91), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 32/167 (19%), Positives = 69/167 (41%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y  +L  L +   C  A +++  M   GIE     ++ ++    +    R AM+ +  M 
Sbjct: 482 YNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMI 541

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
              + P+       IH      ++  A   L  M +     N+L Y  L+   C+  +++
Sbjct: 542 VRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLE 601

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
           DA+  + +M  +G  P+ V++  ++  + +        D ++ +  D
Sbjct: 602 DAMVYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCNNPSDFIQHIAMD 648


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 263/527 (49%), Gaps = 26/527 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+LR ++ RG + +P A+  ++      G   NA ++   M    V P++   N  +H
Sbjct: 160 ALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLH 219

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L     + ++   L ++   G++ N  T N  I+G C+  R+++A+ L++ M     +P
Sbjct: 220 ALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAP 278

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D V+Y T+M  LCK+ +++E    + +M+N                        GCIPD 
Sbjct: 279 DVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQ-----------------------GCIPDD 315

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            TY  +++G+C+ G L +A ++L+     G  P+ V+Y + +NGLC  G    A E+ N 
Sbjct: 316 FTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNE 375

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
           ++ +   P+ + Y+ ++ GL R+G +  A  V+ EMV++G  P     N++I  LC+ G 
Sbjct: 376 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGN 435

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +  A   M + + KG   +V  F +LI G+C++  L+ AL L++ M+     PD +TY +
Sbjct: 436 ISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNS 495

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +++ L K G+ +E  E   +M+ KG  P  +TY  +I  +C++ ++E+   ++ +M    
Sbjct: 496 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDG 555

Query: 580 KCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
               A  +N +I   C  G L+ A  +  K+      A A T ++L+ +Y +K    +A 
Sbjct: 556 LVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAE 615

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           K+   M ++   PDL   + + + L      + A   +   + +G +
Sbjct: 616 KIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFV 662



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 161/608 (26%), Positives = 270/608 (44%), Gaps = 98/608 (16%)

Query: 102 LLRSL-------KPRQICAVLRSQADERVALQFFYWADRQWRYRH------------DPI 142
           LLRSL       KP   C V+R            Y     +  RH            D  
Sbjct: 163 LLRSLSERGCDAKPAAYCTVVRG----------LYAHGHGYNARHLFDEMLGRDVFPDVA 212

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            +  +L  L +      +  +L  + +RG+       +  +      G+L  A+ ++  M
Sbjct: 213 TFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM 272

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
             A VAP+++  NT +  L   +K+ +A ++L RM   G  P+  TYN +I GYC    +
Sbjct: 273 -GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGML 331

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK---------EVRDLMEKMVNDSNL 313
           ++A +L+ +   KG  PD+V+Y +++  LC E  I+         + +DL   +V  ++L
Sbjct: 332 QEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSL 391

Query: 314 FHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG----------------- 353
                 QG I  A +++N+M + GC PD+ TY  ++NG C++G                 
Sbjct: 392 VKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGY 451

Query: 354 ------------------ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
                             +LD A +++++M+ +G  P+ ++Y + LNGLC  GK+ E  E
Sbjct: 452 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNE 511

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
                  +   PNAITY++++    +  +L EA  V+  M + G  P  V  N LI   C
Sbjct: 512 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFC 571

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           R G +DGA    Q+   KG +     F  LI  +  K +++ A  +  +M      PD  
Sbjct: 572 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 631

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY  ++D L K   V+ A   + +M+SKG VP++ T+  +++      RV + + ++  M
Sbjct: 632 TYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIM 691

Query: 576 -------------LSKQKCRTAYNQV-IENLCSFGYLE-EAGKIL------GKVLRTASK 614
                        LS  K   A  ++ +E L   G++   A ++L       K+ R A K
Sbjct: 692 VRMGVVPEVVDTILSTDKKEIAAPKILVEELMKKGHISYRAYEVLHEGVRDNKLTRKARK 751

Query: 615 ADASTCHV 622
           ADAS   V
Sbjct: 752 ADASIMFV 759



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 173/371 (46%), Gaps = 7/371 (1%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR+  A +   +M    C P    Y A+++        DQA K+  +M   G  P+  ++
Sbjct: 85  GRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTH 144

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T  L   C  G+   A  ++ +  E         Y  V+ GL   G    A  +  EM+ 
Sbjct: 145 TVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLG 204

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +  FP     N ++ +LC++G +  +   + + L +G + N       IRG C+ G LEE
Sbjct: 205 RDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEE 264

Query: 498 ALSLLDDM--YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           A++L++ M  Y+    PD VTY T++  L K+ +V+EA + + +M+++G +P   TY T+
Sbjct: 265 AVALVERMGAYVA---PDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTI 321

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I  YC+ G +++  +LL+  + K     R  Y  +I  LC+ G +E A ++  +      
Sbjct: 322 IDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDL 381

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
           K D    + LV+    +G+ L A +V   M      PD+     +   L   G   +A  
Sbjct: 382 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAV 441

Query: 674 LMLRFVERGHI 684
           +M   + +G++
Sbjct: 442 VMNDAIVKGYL 452



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 137/336 (40%), Gaps = 4/336 (1%)

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS--YTAFLNGLCHNGKSLEAREM 396
           +  Y A++      G LD     L     H   P+++   Y A +      G+   A + 
Sbjct: 35  IPAYRALIRELVSAGRLDDVDAALASARSH-LAPDSLQPLYVASIQAYARAGRLRAAVDA 93

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
               +     P A  Y+ +M  L       +A  V   M+  G  P      + ++S C 
Sbjct: 94  FERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCL 153

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            G+   A + ++    +GC      + +++RG    G    A  L D+M      PD  T
Sbjct: 154 TGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVAT 213

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           +  ++ AL + G V E+  L+ K+L +G+     T    I   C+ GR+E+ + L+E+M 
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG 273

Query: 577 SKQKCR-TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
           +        YN ++  LC    ++EA + LG+++      D  T + +++ Y   G+   
Sbjct: 274 AYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQE 333

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           A ++      +  +PD      +   L  EG  E A
Sbjct: 334 ATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERA 369


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 163/591 (27%), Positives = 294/591 (49%), Gaps = 21/591 (3%)

Query: 109 RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA 168
           R +C    SQ  E V+L   + +   +           +++ L++++    A  V R M 
Sbjct: 45  RSLCQKPNSQFTEAVSL---FHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMT 101

Query: 169 RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
              +     + S L+  ++ A K +    V+ ++ K     N+ I N  +  L     + 
Sbjct: 102 HVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVF 161

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           +A+  +  M    ++P++++YN LI G C   ++K+A+ L+ EM   GC P+ V+  T+M
Sbjct: 162 EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLM 221

Query: 289 GYLCKEKRIKEVRDLMEKMVN---DSNL---------FHDQGRIEEAKELVNQMSQMGCI 336
             LCK+ R+ E  +L+E M     D+++         F + G ++  KEL ++M   G  
Sbjct: 222 DGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGIS 281

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
            +VVTY+ +V+G CR+G+  +A  +L  M  HG  P+ V+YT  ++GLC +G++  A ++
Sbjct: 282 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 341

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +N   E+   P+ +TY+V++ GL +EG + +A  ++R M++KG     V  N L++ LC 
Sbjct: 342 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 401

Query: 457 EGKMDGAKKFMQECL-NKGC-AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           +GK+D A K       N+ C   NV  F  LI G C++G L +A+ +   M       + 
Sbjct: 402 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 461

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VTY  ++    K G+++EA EL  ++L  G VP   TY  +I  +C++ R+ ++ K L  
Sbjct: 462 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKM-RMLNIAKGLFC 520

Query: 575 MLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            +       A   YN ++ +LC  G LE+A  +  ++     + D  + + +++  L  G
Sbjct: 521 EMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAG 580

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                 ++  +M    L PD      +  RL   G+ +EA + + R V  G
Sbjct: 581 DFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG 631



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 250/525 (47%), Gaps = 59/525 (11%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  ++R M R+ +     +++ L+    +A KL+ A+ +L  M+ A   PN + C T + 
Sbjct: 163 AMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMD 222

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    ++ +A+  LE M+  G   +V+ Y  LI G+C+   +    +L DEM  KG S 
Sbjct: 223 GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISA 282

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELV 327
           + V+Y  ++  LC+  + KE   ++  M         V  + L       GR   A +L+
Sbjct: 283 NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLL 342

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           N M + G  P  VTY  +++G C+ G +  A K+L+ M   G K + V+Y   + GLC  
Sbjct: 343 NLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDK 402

Query: 388 GKSLEAREMINT--SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
           GK  EA ++ N+    E    PN  T+++++ GL +EG+L++A  + R+MVKKG     V
Sbjct: 403 GKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLV 462

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF---------------- 489
             N+L+    + GK+  A +  ++ L+ G   N   ++ LI GF                
Sbjct: 463 TYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM 522

Query: 490 -------------------CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
                              C++G LE+A SL  +M     +PD +++ T+ID   K G  
Sbjct: 523 RTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDF 582

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQV 588
           +   EL MKM+  GL P  +T+ T+I+R  ++G +++    LE+M++      A  Y+ +
Sbjct: 583 QFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSL 642

Query: 589 IENLCSFGYLEEAGKIL------GKVL--RTASKADASTCHVLVE 625
           ++ L S G   E   +L      G VL  +  S      CH + E
Sbjct: 643 LKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQE 687



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/538 (26%), Positives = 245/538 (45%), Gaps = 55/538 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS--YLMVAYSRAGKLRNAMY 197
           D + Y  ++  L K K  + A  +L  M   G  C P + +   LM    + G++  AM 
Sbjct: 178 DIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG--CFPNSVTCTTLMDGLCKDGRMDEAME 235

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M+K     ++++  T I        L +     + M   GI+ NV+TY+CL+ G C
Sbjct: 236 LLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC 295

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND----SNL 313
            L + K+A  +++ M   G  PD V+Y  ++  LCK+ R     DL+  MV      SN+
Sbjct: 296 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 355

Query: 314 FH-------------------------------------------DQGRIEEAKELVNQM 330
            +                                           D+G+++EA +L N M
Sbjct: 356 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 415

Query: 331 -SQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
                C+ P+V T+  ++ G C+ G L +A K+ ++M   G   N V+Y   L G    G
Sbjct: 416 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAG 475

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K  EA E+     +  + PN+ TYS+++ G  +   L+ A  +  EM   G  P   + N
Sbjct: 476 KIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYN 535

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            L+ SLC+EG ++ AK   QE  N  C  ++++F ++I G  + GD +    L   M   
Sbjct: 536 TLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEM 595

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD +T++T+I+ LSK G ++EA   + +M++ G  P  + Y +++      G   ++
Sbjct: 596 GLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI 655

Query: 569 LKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           + LL +M +K     R   + ++  LC      +  ++L    +  S+  + +C+ L+
Sbjct: 656 INLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELL 713



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 4/189 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y  ++  L K    + AK + + M     E    +F+ ++    +AG  +    +   M 
Sbjct: 534 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV 593

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           +  + P+ L  +T I+ L    +L +A   LERM  +G TP+ L Y+ L+KG        
Sbjct: 594 EMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT 653

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
           + I L+ +M  KG   D+    T++  LC   +  +V +L+      ++    +G     
Sbjct: 654 EIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTS----EGASISC 709

Query: 324 KELVNQMSQ 332
            EL+ Q+ Q
Sbjct: 710 NELLMQLHQ 718


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 243/484 (50%), Gaps = 14/484 (2%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  V+P+       I  L    KL  A    +++  +G+TP+ + Y  LI G C  + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-------- 313
             DA +L  +M  +GC P  V+Y  ++   CK   ++E  DL++KM+ D ++        
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 314 ----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                   GR+EEA  L N+M ++GC P+  ++  ++ G C+  ++DQA ++  +M    
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             P++ SY   ++GL   GK  EA ++     +   TP+A+TY+VV+HG+     L EA 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           ++ + M  KG  P+    N+LI + C+ GKMD A + ++   + G   +VV +++LI G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C    +++A  LL+DM   +  P  VT  T+I  L K GR++EA E++  M+S G  P V
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGK 607
           VTY T++H +C+ G+ E   +LL  M+++        Y  ++  LC    L EA  +  +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +  +    +  T   L+  + + G      K+   M    + PD  +   ++  L   G+
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 668 SEEA 671
           S  A
Sbjct: 481 SARA 484



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 262/553 (47%), Gaps = 18/553 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++ L+K      A+ + + +   G+     A++ L+     A    +A  + 
Sbjct: 9   DSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M +    P+ +  N  I        L +A   +++M   G  P+V+TYN ++ G C  
Sbjct: 69  ADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDS--- 311
            R+++A+ L +EM   GC+P++ S+ T++  LC++ +I +   +  +M       DS   
Sbjct: 129 GRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSY 188

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               +     G++ EA +L  +M   G  P  VTY  V++G C    LD+A ++ + M  
Sbjct: 189 GILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRS 248

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC+P+  ++   ++  C  GK  EA  ++    ++   P+ +TYS ++ GL    ++ +
Sbjct: 249 KGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 308

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++ +MVK+   PT V  N LI  LC+ G++  A++ +   ++ G + +VV + +L+ 
Sbjct: 309 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 368

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C+ G  E A  LL DM      P+ VTYT ++  L K  R+ EA  +  +M S G  P
Sbjct: 369 GHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            + TY  +I  +C  G+V+  LKL  +M+          Y  +   LC  G    A +IL
Sbjct: 429 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488

Query: 606 --GK-VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
             G+  LR+ +  D       V+  L+ G   +A      M     +P  + C  +   L
Sbjct: 489 REGRESLRSEAWGD-EVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 547

Query: 663 ILEGKSEEADTLM 675
              G+  EA  ++
Sbjct: 548 CKSGQGGEARAVL 560



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 236/503 (46%), Gaps = 40/503 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K+   + A  +   M R G      + + +++   +  K+  A  V 
Sbjct: 114 DVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF 173

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+   + P+       I  L    KL +A +   RM  +GITP+ +TYN +I G C  
Sbjct: 174 HEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLA 233

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           + + +A++L   M  KGC P + ++  ++   CK                       +G+
Sbjct: 234 YTLDEALELFKSMRSKGCRPSRFTFNILIDAHCK-----------------------RGK 270

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++EA  L+ +M+  G +PDVVTY+ +++G C +  +D A+ +L+ M    CKP  V+   
Sbjct: 271 MDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++GLC  G+  EARE+++       +P+ +TY+ ++HG  R G+   A +++ +MV +G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  V    L+  LC+  ++  A     +  + GCA N+  +T+LI GFC  G ++  L
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK----MLSKGLVPTVVTYRTV 555
            L  +M      PD V Y T+   L K+GR   A E++ +    + S+     V  YR  
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFA 508

Query: 556 IHRYCQVGRVEDLLKLLEKML------SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           +      G++E  L  +  M+      + ++C +    ++  LC  G   EA  +L +++
Sbjct: 509 VDGLLDAGKMEMALGFVRDMVRGGQLPAPERCAS----LVAGLCKSGQGGEARAVLEEIM 564

Query: 610 RTASKADA-STCHVLVESYLNKG 631
             A    A       VE  + KG
Sbjct: 565 DLAYGGKARGKAAKFVEEMVGKG 587


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 165/642 (25%), Positives = 297/642 (46%), Gaps = 53/642 (8%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWRYRH-------------------------- 139
           L P  +  VL+   D   A++FF W   Q  Y+H                          
Sbjct: 97  LVPSVVGRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFK 156

Query: 140 ---------DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
                    D I Y  ++    K +  Q A R+L  M +RGI      ++ ++      G
Sbjct: 157 NHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNG 216

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           ++ +A+     MQ+   AP+++     +  L    +++ A   LE M  AG  PNV+TYN
Sbjct: 217 RVDSALVHYRDMQRNC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYN 275

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN- 309
            LI G+C L  + +A+ L ++M    CSPD  +Y  ++   CK++R ++   L+++MV  
Sbjct: 276 TLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKY 335

Query: 310 -------DSNLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                    N   D     G+  +A  L   M +  C P   T+  +++ FC+VG+LD A
Sbjct: 336 GCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLA 395

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            ++ Q M   GC P+  +Y   ++G C   +  +AR+++    E    P+ +TY+ ++ G
Sbjct: 396 YELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSG 455

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L +  ++ EA +V   +   G+F   V  + LI  LC+  ++D A+K ++E    G A +
Sbjct: 456 LCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 515

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           VV +T LI GFC+   L+++L+   +M      P  +TY+ +ID L K+ RV +   L+ 
Sbjct: 516 VVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLK 575

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSF 595
            ML +G+ P  + Y +VI   C+    ++  +L  K++ +  C      YN +++ LC  
Sbjct: 576 TMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELY-KLMKQTGCAPTVVTYNVLVDKLCKV 634

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
             L+EA  +L  +       D  T + + + +        A+++   M +R   P   + 
Sbjct: 635 SRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMY 694

Query: 656 KKVSERLILEGKSEEADTLMLRFVERG-HIQPKSEEHLQRQR 696
             +  +L+ E K ++A  +    +E G  + P+    LQ+ +
Sbjct: 695 SLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTLQQNK 736



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 112/285 (39%), Gaps = 43/285 (15%)

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK-GCAVNVVNFTSLIRGFCQ 491
           R + + G +  P  +  ++Q L     +D A KF   C  + G   +      L+  F +
Sbjct: 88  RRLCEFGGYLVPSVVGRVLQQL---DDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVR 144

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           K   +EA  L  +       PD++TY+T+I+   K    ++A  L+ +M  +G+VP    
Sbjct: 145 KKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAV 204

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKM-------------LSKQKCRTA-------------- 584
           Y T+I   C  GRV+  L     M             L    C++A              
Sbjct: 205 YNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIE 264

Query: 585 ---------YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
                    YN +I   C  G ++EA  +  ++L  +   D  T ++L++ Y  +  P  
Sbjct: 265 AGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQD 324

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL---MLR 677
             K+   M      P+      + + L+  GK  +A  L   MLR
Sbjct: 325 GAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLR 369


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 177/650 (27%), Positives = 295/650 (45%), Gaps = 80/650 (12%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWR 136
           +V  VC ++  R  W  K   EL+ L   LK   +  ++    D    +QFFYW  ++  
Sbjct: 47  IVSRVCAILS-RVQW--KGSSELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPF 103

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE----------------AFS 180
           Y+H+   +  ML  L + ++   A  +  LM +    CR E                 F 
Sbjct: 104 YKHNMNCFISMLNRLVRDRVFAPADHIRILMIK---ACRNEEEIRRVADFLNEISGMGFG 160

Query: 181 Y-------LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           +       L++  ++   +  A  +   M  + + P+LL  NT I++L    K+ +A   
Sbjct: 161 FSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELI 220

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           L ++    ++P+V TY  LI G+C    +  A  + D M  +GC P+ V+Y T++  LC 
Sbjct: 221 LSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCN 280

Query: 294 EKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
           E R+ E  D++E+M+                        EEA ELV +M + GC P+V T
Sbjct: 281 EGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQT 340

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           YTA+++G  R+G+L+ A  +  +M   G  PNTV+Y A +N LC  G+   A ++ +  E
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME 400

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                 N  TY+ ++ GL   G + +A  +  +M+K G  PT V  N LI     +G ++
Sbjct: 401 GHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 460

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A + +      GC  +   +  L+ GF + G LE A     +M  C  +P+ V+YT +I
Sbjct: 461 NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520

Query: 522 DALSKNGRVE-----------------------------------EATELMMKMLSKGLV 546
           D  SK+G+V+                                   EA ++  KM+ +GL+
Sbjct: 521 DGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLL 580

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGK 603
           P V+TY T+I   C+ GR +   K+   M  K+KC      Y+ +I  LC  G  +EA  
Sbjct: 581 PNVITYTTLIDGLCRNGRTQFAFKIFHDM-EKRKCLPNLYTYSSLIYGLCQEGKADEAEI 639

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
           +L ++ R     D  T   L++ ++  G    A+ +  RM +    P+ +
Sbjct: 640 LLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYR 689



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/425 (32%), Positives = 209/425 (49%), Gaps = 37/425 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKR-----VLRLMARRGIECRP--EAFSYLMVAYSRAGKL 192
           +P VY   L I   T LC          ++  M +RG  CRP  + ++ L+   SR GKL
Sbjct: 300 EPTVYTYTLPI---TALCAIEHEEEAIELVARMKKRG--CRPNVQTYTALISGLSRLGKL 354

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A+ +   M K  + PN +  N  I+ L VG + + AL+    M+  G   N  TYN +
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 414

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDS 311
           IKG C    I+ A+ L ++M   G  P  V+Y T++ GYL K                  
Sbjct: 415 IKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK------------------ 456

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 G +  A  L++ M + GC PD  TY  +V+GF + G+L+ A    Q+M   G  
Sbjct: 457 ------GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLN 510

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN VSYTA ++G   +GK   A  ++   EE    PN  +Y+ V++GL +E + SEA  +
Sbjct: 511 PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 570

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             +MV++G  P  +    LI  LCR G+   A K   +   + C  N+  ++SLI G CQ
Sbjct: 571 CDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 630

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           +G  +EA  LL +M      PD VT+T++ID     GR++ A  L+ +M+  G  P   T
Sbjct: 631 EGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRT 690

Query: 552 YRTVI 556
           Y  ++
Sbjct: 691 YSVLL 695


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 148/512 (28%), Positives = 262/512 (51%), Gaps = 38/512 (7%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G+L +    L  M      P+++ C + I       K  KA   +E ++ +G  P+V+
Sbjct: 69  RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN LI GYC    I +A++++D M +   +PD V+Y T++  LC               
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRMNV---APDVVTYNTILRTLC--------------- 170

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                   D G++++A E++++  Q  C PDV+TYT ++   C+   + QA K+L +M +
Sbjct: 171 --------DSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRN 222

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G KP+ V+Y   +NG+C  G+  EA + +N        PN IT+++++  +   G+  +
Sbjct: 223 KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD 282

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++ +M++KG  P+ V  N+LI  LCR+G +  A   +++    GC  N +++  L+ 
Sbjct: 283 AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 342

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC++  ++ A+  LD M      PD VTY T++ AL K+G+V+ A E++ ++ SKG  P
Sbjct: 343 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 402

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            ++TY TVI    +VG+ E  +KLL++M  K  +     Y+ ++  L   G ++EA K  
Sbjct: 403 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 462

Query: 606 GKVLRTASKADASTCHVLV-----ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
             +     + +A T + ++         ++ I  LAY     M ++   P       + E
Sbjct: 463 HDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY-----MISKRCKPTEATYTILIE 517

Query: 661 RLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
            +  EG ++EA  L+     RG ++  S E +
Sbjct: 518 GIAYEGLAKEALDLLNELCSRGLVKKSSAEQV 549



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 210/421 (49%), Gaps = 19/421 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D I Y +++    K+     A +VL  M        P+  +Y  ++     +GKL+ AM 
Sbjct: 126 DVITYNVLISGYCKSGEIDNALQVLDRM-----NVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL    +    P+++     I      + + +A++ L+ M+  G  P+V+TYN LI G C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              R+ +AIK ++ MP  GC P+ +++  ++  +C   R  +   L+  M+         
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 N    QG +  A +++ +M   GC P+ ++Y  +++GFC+  ++D+A + L  M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              GC P+ V+Y   L  LC +GK   A E++N    +  +P  ITY+ V+ GL + GK 
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 420

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             A  ++ EM +KG  P  +  + L+  L REGK+D A KF  +    G   N + + S+
Sbjct: 421 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 480

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           + G C+    + A+  L  M   +  P   TYT +I+ ++  G  +EA +L+ ++ S+GL
Sbjct: 481 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540

Query: 546 V 546
           V
Sbjct: 541 V 541



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 119/236 (50%), Gaps = 5/236 (2%)

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L R G+L +    +  MV +G  P  +    LI+  CR GK   A   M+     G   +
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           V+ +  LI G+C+ G+++ AL +LD M +    PD VTY TI+  L  +G++++A E++ 
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
           + L K   P V+TY  +I   C+   V   +KLL++M +K  +     YN +I  +C  G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
            L+EA K L  +     + +  T ++++ S  + G  + A K+   M  +   P +
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 299



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 119/235 (50%), Gaps = 7/235 (2%)

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           ++ L R G+++   KF++  + +G   +++  TSLIRGFC+ G  ++A  +++ +     
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            PD +TY  +I    K+G ++ A +++ +M    + P VVTY T++   C  G+++  ++
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 571 LLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           +L++ L K+ C      Y  +IE  C    + +A K+L ++    SK D  T +VL+   
Sbjct: 181 VLDRQLQKE-CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 239

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             +G    A K    M +    P++     +   +   G+  +A+ L+   + +G
Sbjct: 240 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 294


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 162/559 (28%), Positives = 266/559 (47%), Gaps = 32/559 (5%)

Query: 132 DRQWRYRHDPIVYYMMLEIL---SKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR 188
           D  +  + D +VY  +L +L   SK KL +    V   M  RGI+     F+ LM A  R
Sbjct: 141 DPLFGIQADTVVYNHLLNVLVEGSKMKLLE---TVYSEMGERGIKPDVVTFNTLMKALCR 197

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           A ++R A+ +L  M  + VAP+     T +   V    +  ALR   RM   G +P  +T
Sbjct: 198 AHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVT 257

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
            N LI GYC L R++DA+  I +    G  PD+++Y T +  LC+   +     +M+ MV
Sbjct: 258 VNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMV 317

Query: 309 NDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
            +    HD                    PDV TY  VVN  C+ G+L++AK +L QM   
Sbjct: 318 QEG---HD--------------------PDVFTYNIVVNCLCKNGQLEEAKGILNQMVER 354

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           GC P+  ++   +  LC   +  EA ++      +  +P+  T++++++ L + G    A
Sbjct: 355 GCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLA 414

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             +  EM   G  P  V  N LI +LC  GK+  A   ++E  + GC  + V + ++I G
Sbjct: 415 LRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDG 474

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C+K  +EEA  + D M L     + +T+ T+ID L K+ R+++A +L+ +M+S+GL P 
Sbjct: 475 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPN 534

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
            +TY +++  YC+ G ++    +L+ M +   +     Y  +I  LC  G  + A K+L 
Sbjct: 535 NITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLR 594

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
            +     +A     + +++S   +     A  +   M      PD    K V   L   G
Sbjct: 595 GMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGG 654

Query: 667 KS-EEADTLMLRFVERGHI 684
            S  EA   +L  V++G I
Sbjct: 655 GSIREAFDFLLEMVDKGFI 673



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 270/534 (50%), Gaps = 28/534 (5%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR 162
           LR+    ++   LR Q D   AL+    A  +  +   P VY  ++  L          +
Sbjct: 39  LRAAGQEELLTALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMK 98

Query: 163 VLRL-MARRGIECRPEAFSYLMVAYSRAGKLRNAM-YVLSMMQKA-AVAPNLLICNTAIH 219
           VL   M R G + R       + +Y+R     +A+  VL+ +     +  + ++ N  ++
Sbjct: 99  VLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLN 158

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
           VLV G+K+         M   GI P+V+T+N L+K  C  H+++ A+ +++EM   G +P
Sbjct: 159 VLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAP 218

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D+ ++ T+M                         F ++G I+ A  +  +M +MGC P  
Sbjct: 219 DETTFTTLM-----------------------QGFVEEGSIKAALRVKARMLEMGCSPTK 255

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           VT   ++NG+C++G ++ A   +QQ   +G +P+ ++Y  F+NGLC NG    A ++++ 
Sbjct: 256 VTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDV 315

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             +E   P+  TY++V++ L + G+L EA  ++ +MV++G  P     N LI +LC   +
Sbjct: 316 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNR 375

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           ++ A    ++   KG + +V  F  LI   C+ GD + AL L ++M      PD VTY T
Sbjct: 376 LEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNT 435

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +ID L   G++ +A +L+ +M S G   + VTY T+I   C+  R+E+  ++ ++M  + 
Sbjct: 436 LIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQG 495

Query: 580 KCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
             R A  +N +I+ LC    +++A +++ +++    + +  T + ++  Y  +G
Sbjct: 496 ISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQG 549



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 177/375 (47%), Gaps = 54/375 (14%)

Query: 139 HDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRN 194
           HDP V  Y +++  L K    + AK +L  M  RG  C P+   F+ L+VA     +L  
Sbjct: 321 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERG--CLPDITTFNTLIVALCSGNRLEE 378

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +   +    ++P++   N  I+ L        ALR  E M+ +G TP+ +TYN LI 
Sbjct: 379 ALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLID 438

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------- 307
             C L ++  A+ L+ EM   GC    V+Y T++  LCK+ RI+E  ++ ++M       
Sbjct: 439 NLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 498

Query: 308 --VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
             +  + L        RI++A +L++QM   G  P+ +TY +++  +C+ G++ +A  +L
Sbjct: 499 NAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 558

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI------------------------- 397
           Q M  +G + + V+Y   +NGLC  G++  A +++                         
Sbjct: 559 QTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRR 618

Query: 398 -NTSE---------EEWWTPNAITYSVVMHGL-RREGKLSEACDVVREMVKKGFFPTPVE 446
            NT +         E    P+A TY +V  GL R  G + EA D + EMV KGF P    
Sbjct: 619 NNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSS 678

Query: 447 INLLIQSLCREGKMD 461
             +L + L   G  D
Sbjct: 679 FRMLAEGLLNLGMDD 693


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 154/569 (27%), Positives = 281/569 (49%), Gaps = 37/569 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y H+   Y  +L  L++      A  V + M  +   C+P+AF++  L+    R+ +L  
Sbjct: 3   YEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDK--SCQPDAFTFAILLRGLCRSNQLEK 60

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +L  M++    P+  I N  I          +A +FL  M      P V+TY  ++ 
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------- 307
           G C   R +DA+KL+DEM  KGCSP+  +Y  ++  LC+E+++ E + ++E+M       
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 308 -VNDSNLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
            V   N F        R++EA++    +++M   PDVV+YT V+NG C+ G+LD A +ML
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
             M + GC P+ V+Y++ ++G C  G+   A  ++++  +    PN + Y+ ++  L R 
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA------ 476
           G + +A D++ EM ++GF P  V  N  I  LC+  ++  AK      + +GC       
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357

Query: 477 ----VNVVNFTSLIRGFCQKGDLEEALSLLD---DMYLCKKDPDTVTYTTIIDALSKNGR 529
               V+++ +T L+ G C+ G  +EA +L     D  +C  +PD   Y  ++D+  K  +
Sbjct: 358 SMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKIC--EPDVFFYNVMLDSHCKRRQ 415

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQ 587
           +++A ++  +ML K     VVT+  ++H  C   R+ D   +L  M+ +        Y  
Sbjct: 416 IDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGT 474

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +++ +C  G    A ++  + ++     D  T   L+   +++ +   AY +  ++  R 
Sbjct: 475 LVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERR 534

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLML 676
            +PD K    +  +L L  K  +A+ + L
Sbjct: 535 WVPDDKTLGLLHRKLKLLNKPRKAEVVDL 563



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 218/425 (51%), Gaps = 38/425 (8%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G   NV TYN L+      HR   A  +  EM  K C PD  ++  ++  LC+       
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCR------- 54

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                             ++E+A++L+ +M +MGC+PD   Y A+++G+ +  +  QA K
Sbjct: 55  ----------------SNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 98

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
            L +M  + C P  V+YT  ++GLC   ++ +A ++++   ++  +PN  TY+V++ GL 
Sbjct: 99  FLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 158

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
            E KL EA  ++ EM  +G+FP  V  N  I+ LC+  ++D A+KF+          +VV
Sbjct: 159 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLAR---MPVTPDVV 215

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
           ++T++I G C+ GDL+ A  +LD M      PD VTY+++ID   K G VE A  L+  M
Sbjct: 216 SYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 275

Query: 541 LSKGLVPTVVTYRTV---IHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGY 597
           L  G  P +V Y ++   +HR   +G+ ED+L  +E+         +YN  I+ LC    
Sbjct: 276 LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDV-VSYNACIDGLCKAER 334

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA------YKVACRMFNRNLIPD 651
           +++A  +  +++      +AS+  +L+   L   + L        +  AC +F++ L  D
Sbjct: 335 VKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVL--D 392

Query: 652 LKLCK 656
            K+C+
Sbjct: 393 EKICE 397



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 170/353 (48%), Gaps = 7/353 (1%)

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           MG   +V TY  ++    R    D+A  + Q+M    C+P+  ++   L GLC + +  +
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           AR+++   +E    P+   Y+ ++ G  +     +A   + EMVK    PT V    ++ 
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+  +   A K + E  +KGC+ N+  +  ++ G C++  L+EA  +L++M +    P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D VTY + I  L K  RV+EA + + +M    + P VV+Y TVI+  C+ G ++   ++L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 573 EKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
           + M S + C      Y+ +I+  C  G +E A  +L  +L+   + +    + L+ +   
Sbjct: 238 DHM-SNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 296

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            G    A  +   M  R   PD+       + L    + ++A  +  R VERG
Sbjct: 297 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG 349



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 83/237 (35%), Gaps = 68/237 (28%)

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N L+  L RE + D A    QE ++K C  +   F  L+RG C+   LE+A  LL  M  
Sbjct: 11  NKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKE 70

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD   Y  +I   SK     +A + + +M+    +PTVVT                
Sbjct: 71  MGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVT---------------- 114

Query: 568 LLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
                            Y  +++ LC      +A K+L ++       +  T +V+VE  
Sbjct: 115 -----------------YTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEG- 156

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
                                     LC+        E K +EA  ++     RG+ 
Sbjct: 157 --------------------------LCE--------ERKLDEAKKMLEEMAVRGYF 179


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 166/644 (25%), Positives = 306/644 (47%), Gaps = 54/644 (8%)

Query: 44  DDHFMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSP-KLEGELRNL 102
           +D+ +VL  FD  RV RE              P +   C +I +    +  +L  EL + 
Sbjct: 114 NDYNLVLAFFDWARVRRE--------------PSLEARCIIIHIAVVSNDLRLAHELVHD 159

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR 162
              L  +    V  +Q   R+   + YW         +PI + +  ++L +      A++
Sbjct: 160 Y-FLNSKLEIGVKMTQFTHRLIYTYKYWGP-------NPIAFDIFFQVLVEIGHLSEARK 211

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSR-AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           +L  +   G+    ++ +  +   SR A         + +  +  ++ N    N  I+ L
Sbjct: 212 LLDKLLSYGLVVTVDSCNAFL---SRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSL 268

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
               K+ +A R L +M     TP+V++Y+ +I GYC L  +K A+KL+D+M +KG  P++
Sbjct: 269 CRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNR 328

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
            +Y +++  LCK                        G+  EA++++ +M     IPD V 
Sbjct: 329 YTYNSIILLLCK-----------------------IGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           YT +++GF ++G +  A K   +M      P+ ++YT  + G    GK +E + + +   
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                P+ +TY+ ++    + G++  A  +  EMV+ G  P  V    LI  LC+ G++D
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A + + E   KG  +NV  + S++ G C+ G++E+A+ L+ +M +   DPD +TYTT+I
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           DA  + G +++A +L+ +ML +GL PTVVT+  +++ +C +G +ED  +LL  ML K   
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 582 RTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
             A  YN +++  C    +    KI  ++       D++T ++L++ +        A+ +
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFL 665

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
              M  +  +P +     + +R   + K  EA  L      RGH
Sbjct: 666 YKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEM--RGH 707



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 204/433 (47%), Gaps = 15/433 (3%)

Query: 161 KRVLRLMARRGIE-CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           K+ L+LM    I+  +P  ++Y  +++   + GK   A  VL  M    + P+ ++  T 
Sbjct: 310 KKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           IH       +  A ++ + M    I+P+ +TY  LI+G+    ++ +   L  EM  +G 
Sbjct: 370 IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGL 429

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNLFH---------DQGRIEEAKE 325
            PD+V+Y T++   CK   +     L  +MV      N+             G ++ A E
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+++M + G   +V  Y ++VNG C+ G ++QA K++++M   G  P+ ++YT  ++  C
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   +A +++    +    P  +T++V+M+G    G L +   ++  M++KG  P  +
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N L++  C    M+   K  +   N+G A +   +  LI+G C+  +L+EA  L  +M
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEM 669

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P   +Y  +I    K  +  EA EL  +M   GLV     Y   +    + G V
Sbjct: 670 IEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDV 729

Query: 566 EDLLKLLEKMLSK 578
           E  L L ++ + K
Sbjct: 730 EITLNLCDEAIEK 742



 Score = 40.0 bits (92), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 35/180 (19%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  +++   +      A ++L+ M  RG++     F+ LM  +   G L +   +L
Sbjct: 537 DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN-------------- 245
             M +  + P+ +  NT +    + N +    +  +RM+  G+ P+              
Sbjct: 597 GWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKA 656

Query: 246 ---------------------VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
                                V +YN LIK +    +  +A +L +EM   G   D   Y
Sbjct: 657 RNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIY 716


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 252/476 (52%), Gaps = 20/476 (4%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R+G    ++++L  M +    P++++C   I        + KA+R +E ++  G  P+V 
Sbjct: 97  RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVF 155

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            YN LI G+C ++RI DA +++D M  K  SPD V+Y  ++G LC   ++     +++++
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215

Query: 308 VNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           ++D+                 +G ++EA +L+++M   G  PD+ TY  ++ G C+ G +
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D+A +M++ +   GC+P+ +SY   L  L + GK  E  +++     E   PN +TYS++
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 335

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +  L R+GK+ EA ++++ M +KG  P     + LI + CREG++D A +F++  ++ GC
Sbjct: 336 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 395

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             ++VN+ +++   C+ G  ++AL +   +      P++ +Y T+  AL  +G    A  
Sbjct: 396 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 455

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLC 593
           ++++M+S G+ P  +TY ++I   C+ G V+   +LL  M S +       YN V+   C
Sbjct: 456 MILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFC 515

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
               +E+A  +L  ++    + + +T  VL+E     GI    Y+        +L+
Sbjct: 516 KAHRIEDAIDVLDSMVGNGCRPNETTYTVLIE-----GIGFAGYRAEAMELANDLV 566



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 195/409 (47%), Gaps = 12/409 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++    K      A RVL  M  +        ++ ++ +    GKL  A+ VL
Sbjct: 153 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 212

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +      P ++     I   ++   + +AL+ L+ M   G+ P++ TYN +I+G C  
Sbjct: 213 DQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKE 272

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNLFH- 315
             +  A ++I  + LKGC PD +SY  ++  L  + + +E   LM KM +   D N+   
Sbjct: 273 GMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 332

Query: 316 --------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     G+IEEA  L+  M + G  PD  +Y  ++  FCR G LD A + L+ M  
Sbjct: 333 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 392

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+ V+Y   L  LC NGK+ +A E+     E   +PN+ +Y+ +   L   G    
Sbjct: 393 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 452

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++ EMV  G  P  +  N +I  LCREG +D A + + +  +     +VV +  ++ 
Sbjct: 453 ALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLL 512

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
           GFC+   +E+A+ +LD M      P+  TYT +I+ +   G   EA EL
Sbjct: 513 GFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 561



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 170/318 (53%), Gaps = 4/318 (1%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PDV  Y A++NGFC++  +D A ++L +M      P+TV+Y   +  LC  GK   A ++
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           ++    +   P  ITY++++     EG + EA  ++ EM+ +G  P     N +I+ +C+
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           EG +D A + ++    KGC  +V+++  L+R    +G  EE   L+  M+  K DP+ VT
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y+ +I  L ++G++EEA  L+  M  KGL P   +Y  +I  +C+ GR++  ++ LE M+
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 577 SKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           S   C      YN V+  LC  G  ++A +I GK+       ++S+ + +  +  + G  
Sbjct: 392 S-DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 450

Query: 634 LLAYKVACRMFNRNLIPD 651
           + A  +   M +  + PD
Sbjct: 451 IRALHMILEMVSNGIDPD 468



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 150/314 (47%), Gaps = 16/314 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           + D   Y  ++  + K  +   A  ++R +  +G  C P+  SY  L+ A    GK    
Sbjct: 256 KPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKG--CEPDVISYNILLRALLNQGKWEEG 313

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +++ M      PN++  +  I  L    K+ +A+  L+ M+  G+TP+  +Y+ LI  
Sbjct: 314 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 373

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------VN 309
           +C   R+  AI+ ++ M   GC PD V+Y TV+  LCK  +  +  ++  K+       N
Sbjct: 374 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 433

Query: 310 DSNL------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            S+           G    A  ++ +M   G  PD +TY ++++  CR G +D+A ++L 
Sbjct: 434 SSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLV 493

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M      P+ V+Y   L G C   +  +A +++++       PN  TY+V++ G+   G
Sbjct: 494 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAG 553

Query: 424 KLSEACDVVREMVK 437
             +EA ++  ++V+
Sbjct: 554 YRAEAMELANDLVR 567



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 137/270 (50%), Gaps = 3/270 (1%)

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           + H   R G   E+  ++  MV+KG+ P  +    LI+       +  A + M E L K 
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKF 149

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              +V  + +LI GFC+   +++A  +LD M      PDTVTY  +I +L   G+++ A 
Sbjct: 150 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
           +++ ++LS    PTV+TY  +I      G V++ LKLL++MLS+  +     YN +I  +
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G ++ A +++  +     + D  + ++L+ + LN+G      K+  +MF+    P++
Sbjct: 270 CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 329

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
                +   L  +GK EEA  L+    E+G
Sbjct: 330 VTYSILITTLCRDGKIEEAMNLLKLMKEKG 359



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 5/270 (1%)

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C +G  +E+  ++ T   + + P+ I  + ++ G      + +A  V+ E+++K   P  
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDV 154

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
              N LI   C+  ++D A + +    +K  + + V +  +I   C +G L+ AL +LD 
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           +      P  +TYT +I+A    G V+EA +L+ +MLS+GL P + TY T+I   C+ G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 565 VEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           V+   +++   L  + C     +YN ++  L + G  EE  K++ K+       +  T  
Sbjct: 275 VDRAFEMIRN-LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           +L+ +    G    A  +   M  + L PD
Sbjct: 334 ILITTLCRDGKIEEAMNLLKLMKEKGLTPD 363


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/569 (26%), Positives = 282/569 (49%), Gaps = 25/569 (4%)

Query: 104 RSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
           R+L+P+ + AV+R Q D   AL+ F     +  ++H    Y  M+E L      +  + V
Sbjct: 3   RALQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDV 62

Query: 164 LRLMARRGIECRPEAFSYL--MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           L  M R+ ++ +     Y+  M  Y R GK++ A+ V   M      P++   N  +++L
Sbjct: 63  LAEM-RKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNIL 121

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
           V     ++A +   RM+  GI P+V T+   +K +C   R   A++L++ MP +GC  + 
Sbjct: 122 VEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNA 181

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFH---DQGRIEEAKELVNQ 329
           VSY  V+    KE    E   L ++M+           + L H    +G ++E+++L ++
Sbjct: 182 VSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSK 241

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           + + G  P++ T+   + G CR G +D+A ++L+ +   G  P+ +SY   + G C + K
Sbjct: 242 VMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSK 301

Query: 390 SLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            +EA     +M+N+  E    PN  TY+ +++G  + G +  A  ++R+ + KGF P   
Sbjct: 302 LVEAECYLHKMVNSGVE----PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEF 357

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             + LI  LC +G M+ A     E + KG   +++ + +L++G  ++G + +AL L+ DM
Sbjct: 358 TYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM 417

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 PD  TY  +++ L K G + +A  ++   ++KG +P + T+ T+I  YC+   +
Sbjct: 418 MEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNM 477

Query: 566 EDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           +  +++L+ MLS         YN ++  LC    L+        +L      +  T ++L
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           +ES+        A ++   M  R L PD+
Sbjct: 538 IESFCKDRKVSEAMELFKEMKTRGLTPDI 566



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 256/539 (47%), Gaps = 15/539 (2%)

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
            A R+L  M  +G E    ++  ++  + +      A ++   M K  + P++L  N  I
Sbjct: 164 AALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLI 223

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
           HVL     + ++ +   ++   G+ PN+ T+N  I+G C    I +A +L++ +  +G +
Sbjct: 224 HVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT 283

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKEL 326
           PD +SY T++   CK  ++ E    + KMVN              N F   G ++ A ++
Sbjct: 284 PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI 343

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           +      G IPD  TY++++NG C  G++++A  +  +    G K + + Y   + GL  
Sbjct: 344 LRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSK 403

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G  L+A +++    E   +P+  TY++V++GL + G LS+A  ++ + + KG  P    
Sbjct: 404 QGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFT 463

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            N LI   C++  MD A + +   L+ G   +V+ + +L+ G C+   L+  +     M 
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                P+ +TY  +I++  K+ +V EA EL  +M ++GL P +VT  T+I   C  G ++
Sbjct: 524 EKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELD 583

Query: 567 ---DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
              +L   +EK          +N +I   C    +  A K+  K+  +    D  T  V+
Sbjct: 584 KAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVM 643

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++SY   G   LA+       ++ L+P    C KV   L +  +  EA  ++   V+ G
Sbjct: 644 IDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 249/520 (47%), Gaps = 21/520 (4%)

Query: 112 CAVLRSQADERVALQFFYWADRQWRYR--HDPIVYYMMLEILSKTKLCQGAKRVLRLMAR 169
           CAV+     E   ++ ++  D   +     D + +  ++ +L K    Q ++++   + +
Sbjct: 185 CAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK 244

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           RG+      F+  +    R G +  A  +L  +    + P+++  NT I      +KL +
Sbjct: 245 RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A  +L +M  +G+ PN  TYN +I G+C    +++A K++ +   KG  PD+ +Y +++ 
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364

Query: 290 YLCKE----KRIKEVRDLMEKMVNDSNLFHD--------QGRIEEAKELVNQMSQMGCIP 337
            LC +    + +    + MEK    S + ++        QG + +A +L+  M + GC P
Sbjct: 365 GLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSP 424

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D+ TY  VVNG C++G L  A  +L      GC P+  ++   ++G C      +A E++
Sbjct: 425 DIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEIL 484

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +T      TP+ ITY+ +++GL +  KL    D  + M++KG  P  +  N+LI+S C++
Sbjct: 485 DTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKD 544

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL---LDDMYLCKKDPDT 514
            K+  A +  +E   +G   ++V   +LI G C  G+L++A  L   ++  Y  K    T
Sbjct: 545 RKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY--KFSYST 602

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
             +  +I+A      V  A +L  KM      P   TYR +I  YC+ G ++     L +
Sbjct: 603 AIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLE 662

Query: 575 MLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
            +SK      T   +V+  LC    L EA  I+  +++  
Sbjct: 663 NISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 177/370 (47%), Gaps = 2/370 (0%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G+++EA  +  +M    C P V +Y A++N     G   QA K+  +M   G  P+  +
Sbjct: 89  KGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYT 148

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           +T  +   C  G+   A  ++N    +    NA++Y  V+ G  +E    EA  +  EM+
Sbjct: 149 HTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEML 208

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           K+G  P  +  N LI  LC++G +  ++K   + + +G   N+  F   I+G C+KG ++
Sbjct: 209 KQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           EA  LL+ +      PD ++Y T+I    K+ ++ EA   + KM++ G+ P   TY T+I
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTII 328

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           + +C+ G +++  K+L   + K        Y+ +I  LC+ G +  A  +  + +    K
Sbjct: 329 NGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFK 388

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
                 + LV+    +G+ L A ++   M      PD+     V   L   G   +A+ +
Sbjct: 389 HSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGI 448

Query: 675 MLRFVERGHI 684
           +   + +G I
Sbjct: 449 LNDAIAKGCI 458


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 267/544 (49%), Gaps = 15/544 (2%)

Query: 135 WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
           +  + D +VY  +L +L +    +  + V   M  RGI+     F+ LM A  RA ++R 
Sbjct: 48  FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 107

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +L  M    VAP+     T +   V    +  ALR   RM   G +   +T N LI 
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV---NDS 311
           GYC L R++DA+  I +    G  PD+++Y T +  LC+   +     +M+ MV   +D 
Sbjct: 168 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227

Query: 312 NLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
           ++F            G++EEAK ++NQM   GC+PD+ T+  ++   C    L++A  + 
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 287

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           +Q+   G  P+  ++   +N LC  G    A  +    +    TP+ +TY+ ++  L   
Sbjct: 288 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 347

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           GKL +A D++++M   G   + +  N +I  LC++ +++ A++   +   +G + N + F
Sbjct: 348 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 407

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            +LI G C+   +++A  L++ M      P+ +TY +I+    K G +++A +++  M +
Sbjct: 408 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 467

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
            G    VVTY T+I+  C+ GR +  LK+L  M  K  +    AYN V+++L     + +
Sbjct: 468 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 527

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLL-AYKVACRMFNRNLIPDLKLCKKVS 659
           A  +  ++       DA T  ++       G P+  A+     M ++  IP+    + ++
Sbjct: 528 ALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLA 587

Query: 660 ERLI 663
           E L+
Sbjct: 588 EGLL 591



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 244/523 (46%), Gaps = 61/523 (11%)

Query: 198 VLSMMQKA-AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           +L+ +Q    +  + ++ N  ++VLV G+K+         M   GI P+V+T+N L+K  
Sbjct: 40  ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 99

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C  H+++ A+ +++EM  +G +PD+ ++ T+M                         F +
Sbjct: 100 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM-----------------------QGFVE 136

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G IE A  +  +M +MGC    VT   ++NG+C++G ++ A   +QQ    G +P+ ++
Sbjct: 137 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 196

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG------------- 423
           Y  F+NGLC N     A ++++   +E   P+  TY++V++ L + G             
Sbjct: 197 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 256

Query: 424 ----------------------KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                                 +L EA D+ R++  KG  P     N+LI +LC+ G   
Sbjct: 257 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 316

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A +  +E  N GC  + V + +LI   C  G L +AL LL DM        T+TY TII
Sbjct: 317 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 376

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--Q 579
           D L K  R+EEA E+  +M  +G+    +T+ T+I   C+  +++D  +L+ +M+S+  Q
Sbjct: 377 DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQ 436

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                YN ++ + C  G +++A  IL  +     + D  T   L+      G   +A KV
Sbjct: 437 PNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 496

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              M  + + P  K    V + L       +A +L     E G
Sbjct: 497 LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 539


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 248/483 (51%), Gaps = 26/483 (5%)

Query: 173 ECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           EC P  +++ +V  ++ + GKLR+   +   M    ++P+ +  N  I       ++ +A
Sbjct: 3   ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
            R  E M   G+ P++ TYN L+  +C   ++K+A++L   M  KG  PD V+Y T++  
Sbjct: 63  NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LCK  ++ E  ++         LFH             +M + GC  + V Y A++NG C
Sbjct: 123 LCKTGKVTEALEM---------LFH-------------KMIERGCSANTVAYNALINGLC 160

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +   +++A K+L++M   G  P+ ++Y   L+GLC  GK  EA++  ++     ++P+ +
Sbjct: 161 KDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVV 220

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            Y+ ++  L +EGK  EA  + ++++ KG+ P  V  N ++  L R+  MD A++  ++ 
Sbjct: 221 AYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKM 280

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           +  GCA N   ++ ++ G C+   +++A  +L++M      PD VTY  ++D L K   V
Sbjct: 281 VASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLV 340

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQV 588
           ++A EL   M+  G  P +V+Y  V++  C+  +V D   L ++M+ ++       +N +
Sbjct: 341 DKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNIL 400

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           ++ LC  G L+EA  +L ++  +    D    + L+     +G  + A ++   M  +  
Sbjct: 401 MDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 460

Query: 649 IPD 651
           + D
Sbjct: 461 LSD 463



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 212/416 (50%), Gaps = 13/416 (3%)

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           ++   M   GI      ++ L+  Y++ G++  A  +   M    + P++   N+ ++  
Sbjct: 29  KLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAF 88

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK-LIDEMPLKGCSPD 280
               K+ +A+   + M   G  P+V+TY+ +I G C   ++ +A++ L  +M  +GCS +
Sbjct: 89  CKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSAN 148

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----NLFHDQ--------GRIEEAKELVN 328
            V+Y  ++  LCK++ I+    L+E+M +      N+ ++         G++ EAK+  +
Sbjct: 149 TVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFD 208

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            M   G  PDVV Y  +++   + G+ D+A K+ + +   G  P+TV+Y + L GL    
Sbjct: 209 SMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 268

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              EA EM          PN  TYS+V+ G  R  K+ +A  V+ EM K G  P  V  N
Sbjct: 269 NMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYN 328

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           +L+  LC+   +D A +     ++ GCA ++V+++ ++ G C+   + +A  L D M   
Sbjct: 329 ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 388

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           K  PD VT+  ++D L K G+++EA +L+ +M   G  P  V Y T+++   + GR
Sbjct: 389 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGR 444



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 220/436 (50%), Gaps = 26/436 (5%)

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
           +PN  T+  ++K +C   +++D  KL ++M   G SPD + Y  ++              
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILI-------------- 50

Query: 303 LMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                    + +  +GR++EA  L  +M  +G  P + TY +++N FC+  ++ +A ++ 
Sbjct: 51  ---------DGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELF 101

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI-NTSEEEWWTPNAITYSVVMHGLRR 421
           + M   G +P+ V+Y+  ++GLC  GK  EA EM+ +   E   + N + Y+ +++GL +
Sbjct: 102 KTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCK 161

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           +  +  A  ++ EM  KG+ P  +  N ++  LCR GK+  AK+F     ++G + +VV 
Sbjct: 162 DENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVA 221

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +  L+    ++G  +EA+ L  D+      PDTVTY +I+  L++   ++EA E+  KM+
Sbjct: 222 YNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV 281

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLE 599
           + G  P   TY  V+  +C+  +V+D  K+LE+M  +        YN +++ LC    ++
Sbjct: 282 ASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 341

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           +A ++   ++      D  +  V++           A  +  RM  R L+PD+     + 
Sbjct: 342 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 401

Query: 660 ERLILEGKSEEADTLM 675
           + L   GK +EA  L+
Sbjct: 402 DGLCKAGKLDEAKDLL 417



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 178/351 (50%), Gaps = 13/351 (3%)

Query: 137 YRHDPIVYYMMLEILSKT-KLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           +  D + Y  ++  L KT K+ +  + +   M  RG      A++ L+    +   +  A
Sbjct: 109 FEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERA 168

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +L  M      P+ +  NT +  L    K+++A +F + M   G +P+V+ YN L+  
Sbjct: 169 YKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDA 228

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND----- 310
                +  +A+KL  ++  KG  PD V+Y +++  L ++  + E  ++ +KMV       
Sbjct: 229 LYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPN 288

Query: 311 ----SNLFHDQGR---IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
               S +     R   +++A +++ +MS++G +PDVVTY  +++G C+   +D+A ++  
Sbjct: 289 GATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFS 348

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M  +GC P+ VSY+  LNGLC   K  +AR + +   E    P+ +T++++M GL + G
Sbjct: 349 TMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAG 408

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           KL EA D++ +M   G  P  V  N L+  L ++G+   A +  Q    KG
Sbjct: 409 KLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 3/280 (1%)

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           +PN  T+ VV+    ++GKL +   +  +M+  G  P  +E N+LI    ++G++D A +
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             +E ++ G   ++  + SL+  FC++  ++EA+ L   M     +PD VTY+TII  L 
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 526 KNGRVEEATELMM-KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--R 582
           K G+V EA E++  KM+ +G     V Y  +I+  C+   +E   KLLE+M SK      
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             YN ++  LC  G + EA +    +       D    + L+++   +G    A K+   
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +  +  +PD      +   L  +   +EA+ +  + V  G
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASG 284



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 124/246 (50%), Gaps = 3/246 (1%)

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P      ++++S C++GK+    K  ++ L+ G + + + +  LI G+ +KG ++EA  L
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            ++M     +P   TY ++++A  K  +++EA EL   M  KG  P VVTY T+I   C+
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 562 VGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
            G+V + L++L   + ++ C     AYN +I  LC    +E A K+L ++       D  
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           T + ++      G    A +    M +R   PD+     + + L  EGK++EA  L    
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 679 VERGHI 684
           + +G++
Sbjct: 246 IAKGYM 251


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 165/556 (29%), Positives = 273/556 (49%), Gaps = 40/556 (7%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y    + Y  +L  LS   L   A+R+L  M R G+      ++ L+ A    G+   A+
Sbjct: 116 YAPSLLAYNAVLLALSDASL-PSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEAL 174

Query: 197 YVLSM-MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
            V+   M+ A  APN++  NT +       ++  A R +  M+  G+ P+++T+N ++ G
Sbjct: 175 GVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNG 234

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-------- 307
            C   R++DA K+ DEM  +G +PD VSY T++   CK   + E   +  +M        
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294

Query: 308 -VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            V  ++L H     G +E A  LV QM + G   +  T+TA+++GFCR G LD A   ++
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M     +P+ V Y   +NG C  G+  EARE+I+  E +   P+ +TYS ++ G  + G
Sbjct: 355 EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
               A ++ R+M+KKG  P  +  + LI+ LC E ++  A +  ++ L  G   +   +T
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYT 474

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           +LI G C++G++++ALSL D+M      PD VTY+ +ID LSK+ R +EA  L+ K+  +
Sbjct: 475 TLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYE 534

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA-YNQVIENLCSF---GYLE 599
             VP  + Y  ++H  C                    CRTA +  V+  L  F   G + 
Sbjct: 535 DPVPDNIKYEALMH--C--------------------CRTAEFKSVVALLKGFSMKGLMN 572

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           +A K+   +L    K D S   VL+  +   G  + A     ++      P+      + 
Sbjct: 573 QADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLV 632

Query: 660 ERLILEGKSEEADTLM 675
             L  EG + EAD ++
Sbjct: 633 RGLFEEGMTVEADNVI 648



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 134/436 (30%), Positives = 226/436 (51%), Gaps = 32/436 (7%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G  P++L YN ++    D   +  A +L+  M   G +P+  +Y  ++  LC        
Sbjct: 115 GYAPSLLAYNAVLLALSD-ASLPSARRLLASMLRDGVAPNVYTYNILVRALCA------- 166

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELV-NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                           +G+ EEA  +V + M   GC P+VVTY  +V  FCR GE+D A+
Sbjct: 167 ----------------RGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAE 210

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           +++  M   G +P+ V++   +NGLC  G+  +AR+M +    E  TP+ ++Y+ ++ G 
Sbjct: 211 RLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGY 270

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            + G L EA  V  EM +KG  P  V    LI ++CR G ++ A   + +   +G  +N 
Sbjct: 271 CKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNE 330

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
             FT+LI GFC+ G L++AL  + +M  C+  P  V Y  +I+   K GR++EA EL+ +
Sbjct: 331 FTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHE 390

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGY 597
           M +KG+ P VVTY T++  YC++G  +   +L  KML K     A  Y+ +I  LC    
Sbjct: 391 MEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERR 450

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
           L +A ++  K+L+   + D  T   L++ +  +G    A  +   M  + ++PD+     
Sbjct: 451 LGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDV----- 505

Query: 658 VSERLILEGKSEEADT 673
           V+  ++++G S+ A T
Sbjct: 506 VTYSVLIDGLSKSART 521



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 231/504 (45%), Gaps = 49/504 (9%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           R+   R   + +  ++  L K    + A+++   MAR G+   P+  SY  L+  Y +AG
Sbjct: 217 REGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLT--PDGVSYNTLVSGYCKAG 274

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
            L  A+ V + M +  V P+++   + IH +     L +A+  + +M+  G+  N  T+ 
Sbjct: 275 CLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFT 334

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI G+C    + DA+  + EM      P  V Y  ++   CK                 
Sbjct: 335 ALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCK----------------- 377

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                  GR++EA+EL+++M   G  PDVVTY+ +++G+C++G+ D A ++ ++M   G 
Sbjct: 378 ------LGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGV 431

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            P+ ++Y++ + GLC   +  +A E+     +    P+  TY+ ++ G  +EG + +A  
Sbjct: 432 VPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALS 491

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +  EM+KKG  P  V  ++LI  L +  +   A++ + +   +    + + + +L+   C
Sbjct: 492 LHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMH-CC 550

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +  + +  ++LL                      S  G + +A ++   ML +       
Sbjct: 551 RTAEFKSVVALL-------------------KGFSMKGLMNQADKVYQSMLDRHWKLDGS 591

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
            Y  +IH +C+ G +   L   +++L        T+   ++  L   G   EA  ++ ++
Sbjct: 592 VYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651

Query: 609 LRTASKADASTCHVLVESYLNKGI 632
           L   S ADA T   L++    +G+
Sbjct: 652 LNCCSLADAETSKALIDLNRKEGV 675



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 3/191 (1%)

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK-MLSKGLVPTVVTYR 553
           L  A  LL  M      P+  TY  ++ AL   G+ EEA  ++   M   G  P VVTY 
Sbjct: 135 LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYN 194

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           T++  +C+ G V+   +L+  M     +     +N V+  LC  G +E+A K+  ++ R 
Sbjct: 195 TLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMARE 254

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
               D  + + LV  Y   G    A  V   M  + ++PD+     +   +   G  E A
Sbjct: 255 GLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERA 314

Query: 672 DTLMLRFVERG 682
             L+ +  ERG
Sbjct: 315 VALVGQMRERG 325


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 166/644 (25%), Positives = 306/644 (47%), Gaps = 54/644 (8%)

Query: 44  DDHFMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSP-KLEGELRNL 102
           +D+ +VL  FD  RV RE              P +   C +I +    +  +L  EL + 
Sbjct: 114 NDYNLVLAFFDWARVRRE--------------PSLEARCIIIHIAVVSNDLRLAHELVHD 159

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR 162
              L  +    V  +Q   R+   + YW         +PI + +  ++L +      A++
Sbjct: 160 Y-FLNSKLEIGVKMTQFTHRLIYTYKYWGP-------NPIAFDIFFQVLVEIGHLSEARK 211

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSR-AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           +L  +   G+    ++ +  +   SR A         + +  +  ++ N    N  I+ L
Sbjct: 212 LLDKLLSYGLVVTVDSCNAFL---SRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSL 268

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
               K+ +A R L +M     TP+V++Y+ +I GYC L  +K A+KL+D+M +KG  P++
Sbjct: 269 CRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNR 328

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
            +Y +++  LCK                        G+  EA++++ +M     IPD V 
Sbjct: 329 YTYNSIILLLCK-----------------------IGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           YT +++GF ++G +  A K   +M      P+ ++YT  + G    GK +E + + +   
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                P+ +TY+ ++    + G++  A  +  EMV+ G  P  V    LI  LC+ G++D
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A + + E   KG  +NV  + S++ G C+ G++E+A+ L+ +M +   DPD +TYTT+I
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           DA  + G +++A +L+ +ML +GL PTVVT+  +++ +C +G +ED  +LL  ML K   
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 582 RTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
             A  YN +++  C    +    KI  ++       D++T ++L++ +        A+ +
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFL 665

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
              M  +  +P +     + +R   + K  EA  L      RGH
Sbjct: 666 YKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEM--RGH 707



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 205/433 (47%), Gaps = 15/433 (3%)

Query: 161 KRVLRLMARRGIE-CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           K+ L+LM    I+  +P  ++Y  +++   + GK   A  VL  M    + P+ ++  T 
Sbjct: 310 KKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           IH       +  A ++ + M    I+P+ +TY  LI+G+    ++ +   L  EM  +G 
Sbjct: 370 IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGL 429

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNLFH---------DQGRIEEAKE 325
            PD+V+Y T++   CK   +     L  +MV      N+             G ++ A E
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+++M + G   +V  Y ++VNG C+ G ++QA K++++M   G  P+ ++YT  ++  C
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   +A +++    +    P  +T++V+M+G    G L +   ++  M++KG  P  +
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N L++  C    M+   K  +   N+G A +   +  LI+G C+  +L+EA  L  +M
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEM 669

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P   +Y  +I    K  ++ EA EL  +M   GLV     Y   +    + G V
Sbjct: 670 IEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDV 729

Query: 566 EDLLKLLEKMLSK 578
           E  L L ++ + K
Sbjct: 730 EITLNLCDEAIEK 742



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 37/180 (20%), Positives = 68/180 (37%), Gaps = 35/180 (19%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  +++   +      A ++L+ M  RG++     F+ LM  +   G L +   +L
Sbjct: 537 DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN-------------- 245
             M +  + P+ +  NT +    + N +    +  +RM+  G+ P+              
Sbjct: 597 GWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKA 656

Query: 246 ---------------------VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
                                V +YN LIK +    +I +A +L +EM   G   D   Y
Sbjct: 657 RNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIY 716


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/569 (26%), Positives = 282/569 (49%), Gaps = 25/569 (4%)

Query: 104 RSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
           R+L+P+ + AV+R Q D   AL+ F     +  ++H    Y  M+E L      +  + V
Sbjct: 3   RALQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDV 62

Query: 164 LRLMARRGIECRPEAFSYL--MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           L  M R+ ++ +     Y+  M  Y R GK++ A+ V   M      P++   N  +++L
Sbjct: 63  LAEM-RKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNIL 121

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
           V     ++A +   RM+  GI P+V T+   +K +C   R   A++L++ MP +GC  + 
Sbjct: 122 VEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNA 181

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFH---DQGRIEEAKELVNQ 329
           VSY  V+    KE    E   L ++M+           + L H    +G ++E+++L ++
Sbjct: 182 VSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSK 241

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           + + G  P++ T+   + G CR G +D+A ++L+ +   G  P+ +SY   + G C + K
Sbjct: 242 VMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSK 301

Query: 390 SLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            +EA     +M+N+  E    PN  TY+ +++G  + G +  A  ++R+ + KGF P   
Sbjct: 302 LVEAECYLHKMVNSGVE----PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEF 357

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             + LI  LC +G M+ A     E + KG   +++ + +L++G  ++G + +AL L+ DM
Sbjct: 358 TYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM 417

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 PD  TY  +++ L K G + +A  ++   ++KG +P + T+ T+I  YC+   +
Sbjct: 418 MEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNM 477

Query: 566 EDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           +  +++L+ MLS         YN ++  LC    L+        +L      +  T ++L
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           +ES+        A ++   M  R L PD+
Sbjct: 538 IESFCKDRKVSEAMELFKEMKTRGLTPDI 566



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 256/539 (47%), Gaps = 15/539 (2%)

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
            A R+L  M  +G E    ++  ++  + +      A ++   M K  + P++L  N  I
Sbjct: 164 AALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLI 223

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
           HVL     + ++ +   ++   G+ PN+ T+N  I+G C    I +A +L++ +  +G +
Sbjct: 224 HVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLT 283

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKEL 326
           PD +SY T++   CK  ++ E    + KMVN              N F   G ++ A ++
Sbjct: 284 PDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI 343

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           +      G IPD  TY++++NG C  G++++A  +  +    G K + + Y   + GL  
Sbjct: 344 LRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSK 403

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G  L+A +++    E   +P+  TY++V++GL + G LS+A  ++ + + KG  P    
Sbjct: 404 QGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFT 463

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            N LI   C++  MD A + +   L+ G   +V+ + +L+ G C+   L+  +     M 
Sbjct: 464 FNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                P+ +TY  +I++  K+ +V EA EL  +M ++GL P +VT  T+I   C  G ++
Sbjct: 524 EKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELD 583

Query: 567 ---DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
              +L   +EK          +N +I   C    +  A K+  K+  +    D  T  V+
Sbjct: 584 KAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVM 643

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++SY   G   LA+       ++ L+P    C KV   L +  +  EA  ++   V+ G
Sbjct: 644 IDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 154/602 (25%), Positives = 281/602 (46%), Gaps = 42/602 (6%)

Query: 112 CAVLRSQADERVALQFFYWADRQWRYR--HDPIVYYMMLEILSKTKLCQGAKRVLRLMAR 169
           CAV+     E   ++ ++  D   +     D + +  ++ +L K    Q ++++   + +
Sbjct: 185 CAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK 244

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           RG+      F+  +    R G +  A  +L  +    + P+++  NT I      +KL +
Sbjct: 245 RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A  +L +M  +G+ PN  TYN +I G+C    +++A K++ +   KG  PD+ +Y +++ 
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364

Query: 290 YLCKE----KRIKEVRDLMEKMVNDSNLFHD--------QGRIEEAKELVNQMSQMGCIP 337
            LC +    + +    + MEK    S + ++        QG + +A +L+  M + GC P
Sbjct: 365 GLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSP 424

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D+ TY  VVNG C++G L  A  +L      GC P+  ++   ++G C      +A E++
Sbjct: 425 DIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEIL 484

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +T      TP+ ITY+ +++GL +  KL    D  + M++KG  P  +  N+LI+S C++
Sbjct: 485 DTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKD 544

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL---LDDMYLCKKDPDT 514
            K+  A +  +E   +G   ++V   +LI G C  G+L++A  L   ++  Y  K    T
Sbjct: 545 RKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY--KFSYST 602

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
             +  +I+A  +   V  A +L  KM      P   TYR +I  YC+ G ++     L +
Sbjct: 603 AIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLE 662

Query: 575 MLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRT------------ASKADASTC 620
            +SK      T   +V+  LC    L EA  I+  +++             A K + +  
Sbjct: 663 NISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVNSIFEADKKEVAAP 722

Query: 621 HVLVESYLNKG-IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
            ++VE  L K  I   +Y++        L   ++  K V  R +L   + +   L L FV
Sbjct: 723 KIVVEYLLKKSHITYYSYEL--------LYDGIRNRKVVEARPLLYKVAYQKAKLQLEFV 774

Query: 680 ER 681
           +R
Sbjct: 775 KR 776



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 177/370 (47%), Gaps = 2/370 (0%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G+++EA  +  +M    C P V +Y A++N     G   QA K+  +M   G  P+  +
Sbjct: 89  KGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYT 148

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           +T  +   C  G+   A  ++N    +    NA++Y  V+ G  +E    EA  +  EM+
Sbjct: 149 HTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEML 208

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           K+G  P  +  N LI  LC++G +  ++K   + + +G   N+  F   I+G C+KG ++
Sbjct: 209 KQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           EA  LL+ +      PD ++Y T+I    K+ ++ EA   + KM++ G+ P   TY T+I
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTII 328

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           + +C+ G +++  K+L   + K        Y+ +I  LC+ G +  A  +  + +    K
Sbjct: 329 NGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFK 388

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
                 + LV+    +G+ L A ++   M      PD+     V   L   G   +A+ +
Sbjct: 389 HSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGI 448

Query: 675 MLRFVERGHI 684
           +   + +G I
Sbjct: 449 LNDAIAKGCI 458


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 165/633 (26%), Positives = 285/633 (45%), Gaps = 67/633 (10%)

Query: 122 RVALQFFYWADRQ--WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECR---- 175
           R+AL+F  W  +Q     RH   +  +   IL + +L + AK +L+ +++ G+  +    
Sbjct: 26  RLALKFLNWVIQQPGLELRHLTHMLSITTHILVRARLYENAKSILKHLSQMGVGSKSVFG 85

Query: 176 ------------PEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN-------- 215
                       P  F  L+  Y R G + +A+    +M      P++  CN        
Sbjct: 86  ALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVK 145

Query: 216 ---------------------------TAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
                                        I+VL V  KL KA   L++M+ +G  P+V+T
Sbjct: 146 ERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVT 205

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE----VRDLM 304
           YN ++  YC   R K A++LID+M  KG   D  +Y  ++  LCK  R  +    ++ + 
Sbjct: 206 YNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMR 265

Query: 305 EKMVNDS--------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
           ++M++ +        N F  +G+I  A  +  +MS +  +P+ VTY A+++G C  G  +
Sbjct: 266 KRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFE 325

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           QA  +L+ M   G KPN VSY+A LNGLC + K   ++ ++            I Y+ ++
Sbjct: 326 QALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMI 385

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            GL R G L+E+  ++ +M+K G  P  V  ++LI   CR GK+   K+ + +    G A
Sbjct: 386 DGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLA 445

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            N + +T+LI  +C+ GD+ EA  +   M     D +      ++ +L K+G+V  A   
Sbjct: 446 PNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYF 505

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCS 594
              M   G VP  +T+  +I+ Y   G       + ++M+          Y  +++ LC 
Sbjct: 506 FHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCR 565

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            G  +EA ++L K+    S  D  T + ++      G+   A  +   M  RN++PD   
Sbjct: 566 AGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYT 625

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
              +   LI  GK   A       + +G + P+
Sbjct: 626 YAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPE 658



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 138/572 (24%), Positives = 242/572 (42%), Gaps = 86/572 (15%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  M++ L +  L   + ++L  M + G+      FS L+  + R GK++N   ++  
Sbjct: 379 IAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICK 438

Query: 202 MQKAAVAPNLLI-----------------------------------CNTAIHVLVVGNK 226
           M KA +APN +I                                   CN  +  L    K
Sbjct: 439 MYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGK 498

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +  A  F   M   G  PN +T++C+I GY +      A  + DEM   G  P   +Y  
Sbjct: 499 VGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGG 558

Query: 287 VMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD-------QGRIEEAKELVNQMSQMG 334
           ++  LC+  + KE + L++K+       D+  ++         G + +A  L ++M Q  
Sbjct: 559 LLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRN 618

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC-KPNTVSYTAFLNGLCHNGKSLEA 393
            +PD  TY  +  G  R G++  A      +   G   P  V YT F++GL   G+S  A
Sbjct: 619 VLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAA 678

Query: 394 REMINTSEEE-------------------------------WWT-----PNAITYSVVMH 417
                  E+                                 W+     P+  TY++++H
Sbjct: 679 LYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLH 738

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  ++  LS+  ++   M++ G FP  +  + LI   C+   +D   K +++ L  G AV
Sbjct: 739 GYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAV 798

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +   F  LI  +C+  ++ +A  L++ M L    PD  T+ +II  LS+   V+E+  L+
Sbjct: 799 DQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLL 858

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSF 595
            +ML +G +P    Y  +++R C++G +    KL ++M  L       A + ++  L   
Sbjct: 859 HEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKC 918

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           G +EEA  +L  +LR +     +T   L+  +
Sbjct: 919 GKVEEAKLVLDFMLRKSLIPTIATFTTLMHMF 950



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 109/508 (21%), Positives = 216/508 (42%), Gaps = 18/508 (3%)

Query: 175  RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
             P  F+Y  L+ A  RAGK + A  +L  +     A + +  NT +        L  A+ 
Sbjct: 550  HPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVA 609

Query: 233  FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC-SPDKVSYYTVMGYL 291
              + M    + P+  TY  +  G     ++  A+     +  KG  SP+KV Y T +  L
Sbjct: 610  LFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGL 669

Query: 292  CKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQM-SQMGCIPD 338
             +  + K      E M  +             N +   G++ +A ++   M S +   P 
Sbjct: 670  FRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPS 729

Query: 339  VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            + TY  +++G+ +   L +   +   M   G  P+ ++  + + G C +       +++ 
Sbjct: 730  LATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLK 789

Query: 399  TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                +    +  T+++++       ++ +A D+V  M     FP     + +I  L R  
Sbjct: 790  KMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVS 849

Query: 459  KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
             +  +   + E L +GC  +   + +L+   C+ G +  A  L D+M         V  +
Sbjct: 850  TVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAES 909

Query: 519  TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--L 576
             ++  L+K G+VEEA  ++  ML K L+PT+ T+ T++H +C+   + + LKL + M   
Sbjct: 910  ALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFC 969

Query: 577  SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
              +    AYN +I  LC+ G +  A K+  ++ +     + +T  +L+++     I L  
Sbjct: 970  DVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAK 1029

Query: 637  YKVACRMFNRNLIPDLKLCKKVSERLIL 664
             +V  +      +     C  + + LI+
Sbjct: 1030 GEVLLKDLQERGVISGHWCGGIRQGLII 1057



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 183/430 (42%), Gaps = 24/430 (5%)

Query: 111  ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
            I A L  +     AL F+     +     + ++Y   ++ L +    + A      M + 
Sbjct: 629  IFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKN 688

Query: 171  GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA-AVAPNLLICNTAIHVLVVGNKLAK 229
            G+     A + ++  YSR GK+  A  + +MM     ++P+L   N  +H       L+K
Sbjct: 689  GLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSK 748

Query: 230  ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
                   M   GI P+ LT + LI G+C    +   +KL+ +M L G + D+ ++  ++ 
Sbjct: 749  CSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIM 808

Query: 290  YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
              C+   + +  DL    VN  NLF                      PD+ T+ ++++  
Sbjct: 809  KYCETDEVGKAFDL----VNIMNLFD-------------------IFPDMTTHDSIISVL 845

Query: 350  CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
             RV  + ++  +L +M   GC P+   Y A +N +C  G    A ++ +  E    +   
Sbjct: 846  SRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGD 905

Query: 410  ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            +  S ++ GL + GK+ EA  V+  M++K   PT      L+   CR   +  A K    
Sbjct: 906  VAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDT 965

Query: 470  CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
                   ++V+ +  LI G C  GD+  AL L  ++      P+  TY  +IDA+  N  
Sbjct: 966  MDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDI 1025

Query: 530  VEEATELMMK 539
                 E+++K
Sbjct: 1026 SLAKGEVLLK 1035



 Score = 44.3 bits (103), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 47/234 (20%), Positives = 93/234 (39%), Gaps = 33/234 (14%)

Query: 139  HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA--YSRAGKLRNAM 196
            HD I+      +LS+    Q +  +L  M  RG  C P+   Y+ +     R G +  A 
Sbjct: 838  HDSII-----SVLSRVSTVQESHLLLHEMLERG--CIPDRRQYIALVNRMCRMGHIHGAF 890

Query: 197  YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             +   M+   ++   +  +  +  L    K+ +A   L+ M    + P + T+  L+  +
Sbjct: 891  KLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMF 950

Query: 257  CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
            C    + +A+KL D M       D ++Y  ++  LC +                      
Sbjct: 951  CRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCAD---------------------- 988

Query: 317  QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG-FCRVGELDQAKKMLQQMYHHG 369
             G +  A +L  ++ Q G  P++ TY  +++  F     L + + +L+ +   G
Sbjct: 989  -GDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQERG 1041


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 260/488 (53%), Gaps = 21/488 (4%)

Query: 172 IECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           +EC+P   ++ ++   + +A +L+ A+     M++  VAPN    N  ++ L      +K
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSK 59

Query: 230 ALRFLERMQLA-GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTV 287
           A   L+ M+    + P+++TY+ +I G+C    +  A +++ EM  + G +PD V+Y +V
Sbjct: 60  AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSV 119

Query: 288 MGYLCKEKRIKE----VRDLMEKMVNDSNL--------FHDQGRIEEAKELVNQ-MSQMG 334
           +  LC++ ++      VR++  K V             + +  +++EA +L  + ++   
Sbjct: 120 VDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS 179

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             PDVVTYTA+++GFC+ G L++A KML  M    C PN V+Y++ L+GLC  G   +A 
Sbjct: 180 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 239

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           ++      +   PN +TY+ ++HGL    K+  A  ++ EM      P  V  N L+   
Sbjct: 240 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGY 299

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK-DPD 513
           CR G+++ AK+  +E   K C  + + +T L+RGFC    LEEA  LL++M      DPD
Sbjct: 300 CRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 359

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VTY+ ++   S+  R  EA E + +M+++ + P  VTY ++I   C+ GRV+  +++L+
Sbjct: 360 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLK 419

Query: 574 KMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            M++K  +     +N VI  LC  G ++EA K+L  +     +    T   L+E +   G
Sbjct: 420 NMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 479

Query: 632 IPLLAYKV 639
              +AY++
Sbjct: 480 RMEIAYEL 487



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 258/528 (48%), Gaps = 66/528 (12%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVL-S 200
           Y +++  L K +L   A  VL+ M R G    P+  +Y  V   + + G++  A  +L  
Sbjct: 44  YNVVVNGLCKARLTSKAYEVLKEM-RDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 102

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           M+ +  +AP+++   + +  L    K+ +A   +  M+L G+ P+  T++ LI G+C+  
Sbjct: 103 MVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 162

Query: 261 RIKDAIKLIDE-MPLKGCSPDKVSYYTVMGYLCK----EKRIK-----EVRDLMEKMVND 310
           ++ +A+KL  E +      PD V+Y  ++   CK    EK +K     E R  +  +V  
Sbjct: 163 KVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTY 222

Query: 311 SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           S+L H     G +++A +L  +M+  GC+P+VVTYT +++G C   ++D A+ ++ +M  
Sbjct: 223 SSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTA 282

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMI------------------------------ 397
             C P+TVSY A L+G C  G+  EA+++                               
Sbjct: 283 TCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEE 342

Query: 398 ------NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
                 N        P+ +TYS+V+ G  R  +  EA + ++EM+ +   P  V  + LI
Sbjct: 343 ARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLI 402

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LC+ G++D A + ++  +NK    +V  F S+I   C+ GD++EA  LL  M     +
Sbjct: 403 DGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLE 462

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKM--------LSKGLVPTVVTYRTVIHRYCQVG 563
           P  VTYTT+++  S+ GR+E A EL   M         +  LVP    +  +I   C+  
Sbjct: 463 PGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAR 521

Query: 564 RVEDLLKLLEKMLSKQKCRTAYNQ---VIENLCSFGYLEEAGKILGKV 608
            ++  + ++E++ S++ C  A      +++ L   G  EEAGK++  +
Sbjct: 522 EIDKAMAVVEELRSRE-CEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 568



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 201/393 (51%), Gaps = 22/393 (5%)

Query: 175 RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           +P+  +Y  L+  + ++G L  AM +L +M+     PN++  ++ +H L     L +AL 
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
              RM   G  PNV+TY  LI G C  H++  A  L+DEM    C PD VSY  ++   C
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC 300

Query: 293 KEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQM-SQMGCIPDV 339
           +  RI+E + L ++M   S L            F +  R+EEA+ L+  M +  G  PDV
Sbjct: 301 RLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           VTY+ VV G+ R     +A + +Q+M      PN V+Y++ ++GLC  G+   A E++  
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKN 420

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
              +   P+  T++ V+  L R G + EA  ++  M   G  P  V    L++   R G+
Sbjct: 421 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 480

Query: 460 MDGAKKFMQ----ECLNKGCAVNVV---NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           M+ A +  +    +      A N+V    F++LIRG C+  ++++A+++++++   + +P
Sbjct: 481 MEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEP 540

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
                  I+D L + GR EEA +L+  +   GL
Sbjct: 541 AEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 153/527 (29%), Positives = 258/527 (48%), Gaps = 28/527 (5%)

Query: 163 VLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMM----QKAAVAPNLLICNT 216
            LR M   G  C P AFSY  L+       + + A+++L  M     +    P+++   T
Sbjct: 154 ALRRMPALG--CTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTT 211

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            I+ L+   +L KA    + M   G++PN +TYNCL+ GYC   + K+AI +  +M   G
Sbjct: 212 VINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDG 271

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFHD-------QGRIEEAK 324
             PD V+Y T+M YLCK  R  E R + + MV      DS+++         +G + +  
Sbjct: 272 VEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMH 331

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +L++ M + G  PD   +  ++  + + G +D+A     +M   G  PN V+Y   ++ L
Sbjct: 332 QLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDAL 391

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  GK  +A    +    E  TPN + +  ++HGL    K  +A ++  EM+ +G  P  
Sbjct: 392 CRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNT 451

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           +  N L+  LC+EG +  AK      +      +V+ +T+LI G+C  G ++EA  LL+ 
Sbjct: 452 IFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEG 511

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M L    P+ VTY TII+   KNGR+E+A  L  +M SKG+ P +V Y T++H   Q  R
Sbjct: 512 MVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRR 571

Query: 565 VEDLLKLLEKMLSKQKCRT-----AYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
           +    +L   M+   KC        YN +++ LC     ++A ++   +          T
Sbjct: 572 IAAAKELYLWMI---KCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRT 628

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
            ++++++ L  G    A  +   +  R L+P++     + + LI +G
Sbjct: 629 FNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 675



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 211/456 (46%), Gaps = 22/456 (4%)

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL-IDEMPLKGCSPDKVSYYTVM 288
           A   L R+   G T   +T++ L+KG C   R  DA+ + +  MP  GC+P+  SY  ++
Sbjct: 115 AFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILL 174

Query: 289 GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             LC E R ++   L+  M+ D                    ++ GC PDVV+YT V+NG
Sbjct: 175 KGLCDENRSQQALHLLHTMMADD-------------------TRGGCPPDVVSYTTVING 215

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
             R G+LD+A  +  +M   G  PN ++Y   L+G C +GK  EA  +      +   P+
Sbjct: 216 LLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPD 275

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
            +TY+ +M  L + G+  EA  V   MVKKG  P       L+     EG +    + + 
Sbjct: 276 VVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLD 335

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
             +  G   +   F  LI  + + G ++EA+     M      P+ VTY T++DAL + G
Sbjct: 336 VMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVG 395

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YN 586
           +V++A     +++S+GL P  V +RT+IH  C   + +   +L  +M+ +  C     +N
Sbjct: 396 KVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFN 455

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            ++ +LC  G +  A  I   ++R   + D  T   L++ Y   G    A K+   M   
Sbjct: 456 TLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLD 515

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            + P+      +       G+ E+A +L  +   +G
Sbjct: 516 GVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKG 551



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 232/498 (46%), Gaps = 16/498 (3%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  +L     +   + A  + R M R G+E     ++ LMV   + G+   A  V   
Sbjct: 242 ITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDS 301

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M K    P+  I  T +H       L +  + L+ M   G  P+   +N LI  Y     
Sbjct: 302 MVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGM 361

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------N 312
           + +A+    +M  +G  P+ V+Y TVM  LC+  ++ +     ++++++           
Sbjct: 362 VDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRT 421

Query: 313 LFHDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L H      + ++A+EL  +M   G  P+ + +  ++N  C+ G + +AK +   M    
Sbjct: 422 LIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD 481

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            + + ++YT  ++G C +GK  EA +++     +   PN +TY+ +++G  + G++ +AC
Sbjct: 482 VQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDAC 541

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            + R+M  KG  P  V  + ++  L +  ++  AK+     +  G  + +  +  +++G 
Sbjct: 542 SLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGL 601

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           CQ    ++AL +  ++ L        T+  +IDAL K GR +EA +L   +L++GLVP V
Sbjct: 602 CQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNV 661

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILG 606
           VTY  ++    + G +E+L  L    L K  C       N ++  L   G + +AG  L 
Sbjct: 662 VTYWLMMKSLIEQGLLEELDDLFLS-LEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLS 720

Query: 607 KVLRTASKADASTCHVLV 624
           K+       +AST   LV
Sbjct: 721 KIDENNFSLEASTAESLV 738



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 173/367 (47%), Gaps = 11/367 (2%)

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A  L N+M +     D+ TY+ V+    R G LD A   L ++   G     ++++  L 
Sbjct: 84  ALSLFNRMPR----ADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLK 139

Query: 383 GLCHNGKSLEAREM-INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV----K 437
           GLCH+ ++ +A ++ +        TPNA +Y++++ GL  E +  +A  ++  M+    +
Sbjct: 140 GLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTR 199

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G  P  V    +I  L REG++D A     E L++G + N + +  L+ G+C  G  +E
Sbjct: 200 GGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKE 259

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A+ +   M     +PD VTY T++  L KNGR  EA ++   M+ KG  P    Y T++H
Sbjct: 260 AIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLH 319

Query: 558 RYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
            Y   G +  + +LL+ M+    Q     +N +I      G ++EA     K+ +     
Sbjct: 320 GYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHP 379

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           +  T   ++++    G    A     R+ +  L P+  + + +   L    K ++A+ L 
Sbjct: 380 NIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELA 439

Query: 676 LRFVERG 682
           +  + RG
Sbjct: 440 VEMIGRG 446



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 178/442 (40%), Gaps = 67/442 (15%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARR 170
            +L   A E   +Q     D   R    P   ++ +++   +K  +   A      M ++
Sbjct: 316 TLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQ 375

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G+      +  +M A  R GK+ +AM     +    + PN ++  T IH L   +K  KA
Sbjct: 376 GLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKA 435

Query: 231 LRFLERMQLAGITPN-----------------------------------VLTYNCLIKG 255
                 M   GI PN                                   V+TY  LI G
Sbjct: 436 EELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDG 495

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           YC   ++ +A KL++ M L G  P++V+Y T++   CK                      
Sbjct: 496 YCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCK---------------------- 533

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             GRIE+A  L  QM+  G  P +V Y+ +++G  +   +  AK++   M   G K    
Sbjct: 534 -NGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIG 592

Query: 376 SYTAFLNGLCHNGKSLEAREMI-NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           +Y   L GLC N  + +A  M  N    ++   N  T+++++  L + G+  EA D+   
Sbjct: 593 TYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNR-TFNIMIDALLKGGRHDEAKDLFAS 651

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           ++ +G  P  V   L+++SL  +G ++            GC  +     +L+    QKG+
Sbjct: 652 LLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGE 711

Query: 495 LEEALSLLDDMYLCKKDPDTVT 516
           + +A      +YL K D +  +
Sbjct: 712 VRKA-----GVYLSKIDENNFS 728



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 94/214 (43%), Gaps = 9/214 (4%)

Query: 484 SLIRGFCQK-GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK-ML 541
           S++ G C + G L+ A + L  +         +T++ ++  L  + R  +A ++ ++ M 
Sbjct: 100 SIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMP 159

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML---SKQKCR---TAYNQVIENLCSF 595
           + G  P   +Y  ++   C   R +  L LL  M+   ++  C     +Y  VI  L   
Sbjct: 160 ALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLRE 219

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
           G L++A  +  ++L      +  T + L+  Y + G P  A  +  +M    + PD+   
Sbjct: 220 GQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTY 279

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
             +   L   G+S EA  +    V++GH +P S 
Sbjct: 280 NTLMVYLCKNGRSMEARKVFDSMVKKGH-KPDSS 312


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 246/464 (53%), Gaps = 12/464 (2%)

Query: 176 PEAFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P  F++ + A +  R G+   A+ +L  M +    P+ ++  T IH L     + +A   
Sbjct: 170 PTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATL 229

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           L+ M L G + +V T+N ++ G C L R+++A +L+D M ++GC P+ ++Y  ++  LC 
Sbjct: 230 LDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCL 289

Query: 294 EKRIKEVRDLMEKMVN-DSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
             +++E R ++ ++   +  LF+         G+++EA EL   M   GC PD  TY+ +
Sbjct: 290 ASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSIL 349

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G C++G L  A K+L++M   G  P+ V+YT  L+  C NG     R M+    ++  
Sbjct: 350 IHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGL 409

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           + N   Y+ ++  + ++ ++ +A   ++EM  +G+ P     N +I  LC   +M+ A+ 
Sbjct: 410 SMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEY 469

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             +  L++G   N + + +LI    + G  ++A+SL +DM L     D V+Y  +I AL 
Sbjct: 470 LFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALC 529

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--T 583
           ++G V+ +  L+ +M  KG+ P  V+Y  +I   C+  RV D L+L ++ML+++      
Sbjct: 530 RDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIV 589

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            YN +I  LC  G++  A  +L K+      AD  T ++L+  +
Sbjct: 590 TYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWH 633



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 205/419 (48%), Gaps = 21/419 (5%)

Query: 155 KLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
           +L + A+ V R+M R    C P A +Y  L+     A ++  A  +L  + +     N++
Sbjct: 257 RLREAARLVDRMMIR---GCVPNAITYGFLLKGLCLASQVEEARTMLGRVPEL----NVV 309

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
           + NT I   ++  KL +A    E M   G  P+  TY+ LI G C L R+  A+KL+ EM
Sbjct: 310 LFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREM 369

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG------------RI 320
             KG +P  V+Y  ++   C+      +R ++E M +     + +G            R+
Sbjct: 370 EDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRM 429

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           ++A   + +M   G  PD+ TY  ++   C   ++++A+ + + + H G   N ++Y   
Sbjct: 430 DDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTL 489

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++ L  NG   +A  + N       + + ++Y+ ++  L R+G +  +  ++ EM +KG 
Sbjct: 490 IHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGI 549

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  V  NLLI  LC+  ++  A +  +E LN+    ++V + +LI G C+ G +  AL+
Sbjct: 550 KPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALN 609

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
           LL+ ++      D +TY  +I    K   + +A+ L+ + ++ G+ P   T+  ++  +
Sbjct: 610 LLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNF 668



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 222/476 (46%), Gaps = 24/476 (5%)

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTV 287
           +AL  LE +  + + P  L  + LI  +  L   + A+ L+D++P +   SP   SY TV
Sbjct: 86  RALFLLESLPPSRVPP--LRESLLIPLFRSLAPGR-ALHLLDQLPHRFAVSPSFRSYNTV 142

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ-------------GRIEEAKELVNQMSQMG 334
           +    +     +V  L  +MV+   +                 GR +EA  ++  M++ G
Sbjct: 143 LAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHG 202

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C+PD V Y  V++  C  G +++A  +L +M+  GC  +  ++   ++GLC  G+  EA 
Sbjct: 203 CVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAA 262

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            +++        PNAITY  ++ GL    ++ EA    R M+ +      V  N +I   
Sbjct: 263 RLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEA----RTMLGRVPELNVVLFNTVIGRC 318

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
             +GK+  A +  +   +KGC  +   ++ LI G C+ G L  A+ LL +M      P  
Sbjct: 319 LLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSI 378

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VTYT ++ +  +NG  +    ++  M  KGL   +  Y  +I   C+  R++D ++ +++
Sbjct: 379 VTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQE 438

Query: 575 MLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M S+  +     YN +I +LC+   +EEA  +   +L     A+A T + L+ + L  G 
Sbjct: 439 MKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGS 498

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
              A  +A  M       D+     + + L  +G  + +  L+    E+G I+P +
Sbjct: 499 WQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKG-IKPNN 553



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 165/347 (47%), Gaps = 16/347 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +   M  +G  C P+A +Y ++ +   + G+L +AM +L  M+    AP+++     
Sbjct: 327 AAELYETMGSKG--CPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTIL 384

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +H              LE M   G++ N+  YN +I   C   R+ DA++ + EM  +G 
Sbjct: 385 LHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGY 444

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKE 325
            PD  +Y T++ +LC   +++E   L E ++++         + L H     G  ++A  
Sbjct: 445 KPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAIS 504

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L N M   GC  D+V+Y  ++   CR G +D++  +L +M   G KPN VSY   ++ LC
Sbjct: 505 LANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELC 564

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
              +  +A E+      +  TP+ +TY+ +++GL + G +  A +++ ++  +      +
Sbjct: 565 KTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADII 624

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             N+LI   C+   +  A   +   +  G   N   +  +++ F +K
Sbjct: 625 TYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRK 671



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 118/269 (43%), Gaps = 29/269 (10%)

Query: 111 ICAVLRSQADERV--ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA 168
           ICAV +   D R+  A++F      Q  Y+ D   Y  ++  L      + A+ +   + 
Sbjct: 420 ICAVCK---DRRMDDAMRFMQEMKSQ-GYKPDICTYNTIIYHLCNNNQMEEAEYLFENLL 475

Query: 169 RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
             G+      ++ L+ A  R G  ++A+ + + M     + +++  N  I  L     + 
Sbjct: 476 HEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVD 535

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           +++  L  M   GI PN ++YN LI   C   R++DA++L  EM  +  +PD V+Y T++
Sbjct: 536 RSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLI 595

Query: 289 GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             LCK   +    +L+EK+ N+    H                      D++TY  +++ 
Sbjct: 596 NGLCKMGWMHAALNLLEKLHNED--VH---------------------ADIITYNILISW 632

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            C+   L  A  +L +    G  PN  ++
Sbjct: 633 HCKARLLHDASMLLNRAVTSGITPNERTW 661


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/429 (32%), Positives = 223/429 (51%), Gaps = 19/429 (4%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLA---GITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
           N+ ++V++      +AL F   +  A    I+PNVLT+N +IK  C +  + DAI++  +
Sbjct: 165 NSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRD 224

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGR 319
           M ++ C PD  +Y T+M  LCK  RI E   L+++M  D             N    +G 
Sbjct: 225 MTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGD 284

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +  A +LV+ M   GCIP+ VTY  +++G C  G+L++A  +L +M    C PN V+Y  
Sbjct: 285 LSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGT 344

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +NGL   G++L+   ++   EE  +  N   YS ++ GL +EGK  EA  + +EM  KG
Sbjct: 345 IINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKG 404

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           +    +  + +I  LCR+GK D A + + E  NKGC  N    +SL++GF + G+   A+
Sbjct: 405 YELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAV 464

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +  DM       + V Y+ +I  L K+G+V+EA  +  +ML KG  P VV Y ++I+  
Sbjct: 465 EVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGL 524

Query: 560 CQVGRVEDLLKLLEKMLSK----QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
              G VED ++L  +ML +    Q     YN ++  LC    +  A  +L  +L      
Sbjct: 525 SIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDP 584

Query: 616 DASTCHVLV 624
           D  TC + +
Sbjct: 585 DLVTCTIFL 593



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 233/469 (49%), Gaps = 41/469 (8%)

Query: 165 RLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
            ++  +G+   P   ++ +V  A  + G + +A+ V   M      P++    T +  L 
Sbjct: 186 HVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLC 245

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
             +++ +A+  L+ MQ+ G  P+ +T+N LI G C    +  A KL+D M LKGC P++V
Sbjct: 246 KADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEV 305

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQM 330
           +Y T++  LC + ++++   L+++MV+              N    QGR  +   ++  M
Sbjct: 306 TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALM 365

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            + G   +   Y+ +++G  + G+  +A  + ++M   G + NT+ Y+A ++GLC +GK 
Sbjct: 366 EERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKP 425

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            +A E+++    +  TPNA T S +M G    G    A +V ++M K  F    V  ++L
Sbjct: 426 DDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVL 485

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK- 509
           I  LC++GK+  A     + L KGC  +VV ++S+I G    G +E+A+ L ++M LC+ 
Sbjct: 486 IHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEM-LCQG 544

Query: 510 --KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT------------- 554
               PD VTY  +++ L K   +  A +L+  ML +G  P +VT                
Sbjct: 545 PDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQ 604

Query: 555 --------VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
                   ++ R  +  RV    K++E ML K      + + +V+ENLC
Sbjct: 605 DGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLC 653



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 231/467 (49%), Gaps = 41/467 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + + ++++ + K  L   A +V R M  R  +C P+ ++Y  LM    +A ++  A+ +L
Sbjct: 200 LTFNLVIKAMCKVGLVDDAIQVFRDMTIR--KCEPDVYTYCTLMDGLCKADRIDEAVSLL 257

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             MQ     P+ +  N  I+ L     L++A + ++ M L G  PN +TYN LI G C  
Sbjct: 258 DEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLK 317

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEK---MVND--- 310
            +++ AI L+D M    C P+ V+Y T++  L K+ R  +   V  LME+    VN+   
Sbjct: 318 GKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVY 377

Query: 311 ----SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
               S LF  +G+ +EA  L  +M+  G   + + Y+AV++G CR G+ D A ++L +M 
Sbjct: 378 STLISGLFK-EGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMT 436

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
           + GC PN  + ++ + G    G S  A E+     +  +T N + YSV++HGL ++GK+ 
Sbjct: 437 NKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 496

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG--CAVNVVNFTS 484
           EA  V  +M+ KG  P  V  + +I  L   G ++ A +   E L +G     +VV +  
Sbjct: 497 EAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNI 556

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS------------------- 525
           L+   C++  +  A+ LL+ M     DPD VT T  +  L                    
Sbjct: 557 LLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDELVVR 616

Query: 526 --KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
             K  RV  A++++  ML K L P   T+  V+   C+  +V+ +++
Sbjct: 617 LLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAVIQ 663



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 195/453 (43%), Gaps = 53/453 (11%)

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           T+  LI  Y +L   K   K++D M  +     +  +  +     K    ++  DL ++M
Sbjct: 92  TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRM 151

Query: 308 VNDS-------------NLFHDQGRIEEAKELVNQM---SQMGCIPDVVTYTAVVNGFCR 351
             +              N+   +G    A E  N +     +   P+V+T+  V+   C+
Sbjct: 152 ACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCK 211

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
           VG +D A ++ + M    C+P+                                     T
Sbjct: 212 VGLVDDAIQVFRDMTIRKCEPDVY-----------------------------------T 236

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y  +M GL +  ++ EA  ++ EM   G FP+PV  N+LI  LC++G +  A K +    
Sbjct: 237 YCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMF 296

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            KGC  N V + +LI G C KG LE+A+SLLD M   K  P+ VTY TII+ L K GR  
Sbjct: 297 LKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRAL 356

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVI 589
           +   ++  M  +G       Y T+I    + G+ ++ + L ++M  K  +     Y+ VI
Sbjct: 357 DGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVI 416

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           + LC  G  ++A ++L ++       +A TC  L++ +   G    A +V   M   N  
Sbjct: 417 DGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFT 476

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +      +   L  +GK +EA  +  + + +G
Sbjct: 477 QNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKG 509



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 5/246 (2%)

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLN-KGCAV--NVVNFTSLIRGFCQKGDLEEAL 499
           T    N ++  + +EG    A +F    +  KG ++  NV+ F  +I+  C+ G +++A+
Sbjct: 160 TGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAI 219

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +  DM + K +PD  TY T++D L K  R++EA  L+ +M   G  P+ VT+  +I+  
Sbjct: 220 QVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGL 279

Query: 560 CQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C+ G +    KL++ M  K        YN +I  LC  G LE+A  +L +++ +    + 
Sbjct: 280 CKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNV 339

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLR 677
            T   ++   + +G  L    V   M  R    +  +   +   L  EGKS+EA  L   
Sbjct: 340 VTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKE 399

Query: 678 FVERGH 683
              +G+
Sbjct: 400 MTVKGY 405



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 92/211 (43%), Gaps = 29/211 (13%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF--SYLMVAYSRAGKLRN 194
           Y  + IVY  +++ L +      A  VL  M  +G  C P A+  S LM  +  AG    
Sbjct: 405 YELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKG--CTPNAYTCSSLMKGFFEAGNSHR 462

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ V   M K     N +  +  IH L    K+ +A+    +M   G  P+V+ Y+ +I 
Sbjct: 463 AVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMIN 522

Query: 255 GYCDLHRIKDAIKLIDEMPLKG--CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           G      ++DA++L +EM  +G    PD V+Y  ++  LCK                   
Sbjct: 523 GLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCK------------------- 563

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
               Q  I  A +L+N M   GC PD+VT T
Sbjct: 564 ----QSSISRAIDLLNSMLDRGCDPDLVTCT 590


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 147/585 (25%), Positives = 272/585 (46%), Gaps = 35/585 (5%)

Query: 90  AWSPKLEGELRNLL-----RSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVY 144
           A SP  + ++ +LL     +S KPR+     R   D RV +                   
Sbjct: 80  ASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVP--------------ASAS 125

Query: 145 YMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQK 204
             +L +LS+      A+   RL+     E      + ++ +Y +  +   A  V+S M+K
Sbjct: 126 NALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEK 185

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
             V P+++  N  I        +  A+  ++ M   G+ P ++TYN ++KG C   R   
Sbjct: 186 RCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDK 245

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMVNDS--------N 312
           A ++   M     +PD  S+  ++G  C+   +KE     +++  + V            
Sbjct: 246 AKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIG 305

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
           LF  +G ++ A   + +M  +G +PD V YT V+ GFCR G + +A ++  +M   GC P
Sbjct: 306 LFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLP 365

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           + V+Y   LNGLC   + L+A +++N  EE   TP+  T++ ++HG  R+G    A  + 
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLF 425

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             ++++   P  V  N LI  +CR+G +  A +   +   +    N + ++ LI   C+K
Sbjct: 426 DTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEK 485

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G +E+A   LD+M      P+  TY +II    ++G V++  + + KM    + P ++T+
Sbjct: 486 GQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITF 545

Query: 553 RTVIHRYCQVGRVE---DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
            T+IH Y +   +    ++  ++EK + +    T YN +I      G +++AG++   + 
Sbjct: 546 NTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVT-YNMIINGFSEQGNMQDAGRVFKGMG 604

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            +  + D  T   L+  ++  G    A+++   M +R   PD K 
Sbjct: 605 DSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDKF 649



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 253/536 (47%), Gaps = 34/536 (6%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG--KLRNAMYV 198
           P V+ +++   ++++  + A    RL+    +     A + L+   SRAG   L    Y 
Sbjct: 87  PQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYR 146

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L +   + V  N    N  +H      +   A   +  M+   + P+V+T+N LI     
Sbjct: 147 LVLSSDSEV--NAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
              +  AI L+D M  +G  P  V+Y +V+  LCK +R                      
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRF--------------------- 243

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
             ++AKE+   M Q    PDV ++  ++ GFCRVGE+ +A K  ++M H    P+ VS++
Sbjct: 244 --DKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFS 301

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             +      G+   A   +   +     P+ + Y++V+ G  R G +SEA  V  EMV  
Sbjct: 302 CLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGF 361

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  V  N L+  LC++ ++  A+K + E   +G   ++  FT+LI G+C++G+ E A
Sbjct: 362 GCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENA 421

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L L D +   +  PD VTY ++ID + + G + +A EL   M ++ ++P  +TY  +I  
Sbjct: 422 LQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDS 481

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           +C+ G+VED    L++M+ K        YN +I+  C  G +++  + L K+ +     D
Sbjct: 482 HCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPD 541

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
             T + L+  Y+ +     A+ V   M    + PD      V+  +I+ G SE+ +
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPD-----AVTYNMIINGFSEQGN 592



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 148/305 (48%), Gaps = 8/305 (2%)

Query: 376 SYTAFLNGLCHNG-KSLE---AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           +YT  LN + H+  K+LE   A  +I+  E+    P+ +T++V++    R G +  A  +
Sbjct: 157 AYT--LNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIAL 214

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           V  M  +G  P  V  N +++ LC+  + D AK+  +       A +V +F  LI GFC+
Sbjct: 215 VDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCR 274

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G+++EA+    +M      PD V+++ +I   S+ G ++ A   + +M   GLVP  V 
Sbjct: 275 VGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVI 334

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y  VI  +C+ G + + L++ ++M+          YN ++  LC    L +A K+L ++ 
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEME 394

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
                 D  T   L+  Y  +G    A ++   +  + L PD+     + + +  +G   
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLA 454

Query: 670 EADTL 674
           +A+ L
Sbjct: 455 KANEL 459



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 109/238 (45%), Gaps = 2/238 (0%)

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +N+++ S C+  + DGA   + E   +    +VV    LI    + GD++ A++L+D M 
Sbjct: 160 LNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMA 219

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                P  VTY +++  L K+ R ++A E+   M    + P V ++  +I  +C+VG V+
Sbjct: 220 NRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVK 279

Query: 567 DLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           + +K  ++M  +       +++ +I      G ++ AG  L ++       D     +++
Sbjct: 280 EAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVI 339

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             +   G    A +V   M     +PD+     +   L  + +  +A+ L+    ERG
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERG 397


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/563 (26%), Positives = 280/563 (49%), Gaps = 17/563 (3%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVL-RLMARRGIECRPEAFSYLMV--AYSRAGKLR 193
           Y  D   Y  +++ L   K  Q A  +L  + A  G  C P   SY  V   + + G++ 
Sbjct: 158 YTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVD 217

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A ++   M    + P+++  N+ I  L     + KA+  L+ M   G+ P+  TYN +I
Sbjct: 218 KAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMI 277

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---- 309
           +GYC L ++++A++L+ +M   G  PD V+Y  ++ Y CK  R  E R + + MV     
Sbjct: 278 RGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQK 337

Query: 310 -DSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
            +S ++H        +G + + ++L++ M + G   +   +  ++  + + G +D+A   
Sbjct: 338 PNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTA 397

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             +M  +G +P+ VSY+  ++ LC  G+  +A    N    E  +PN I+++ ++HGL  
Sbjct: 398 FTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCS 457

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            G+  +  ++  EM+ +G  P  + +N ++ +LC+EG++  A+ F    ++ G   +VV+
Sbjct: 458 IGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVS 517

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           + +LI G+C  G ++E++  LD M      PD+ TY ++++   KNGRVE+A  L  +M 
Sbjct: 518 YNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMF 577

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLE 599
            K +    +T   ++H   Q GR+    +L  KM+ +  Q     YN V+  LC    ++
Sbjct: 578 RKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVD 637

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           EA ++   +     + D  T  +++ + L  G    A  +   M  R  +PD+     + 
Sbjct: 638 EALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMI 697

Query: 660 ERLILEGKSEEADTLMLRFVERG 682
           +  I EG  EE+D L L   + G
Sbjct: 698 KSHIEEGLLEESDNLFLSMEKNG 720



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 161/595 (27%), Positives = 284/595 (47%), Gaps = 32/595 (5%)

Query: 109 RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA 168
           + +C   +SQ  E + L     AD  +    + + Y  +++   K      A  +   M 
Sbjct: 170 KGLCVEKKSQ--EALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMM 227

Query: 169 RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
            +G+      ++ L+    +A  +  A+ +L  M    V P+    N  I       +L 
Sbjct: 228 GQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLE 287

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           +A+R L++M  +G+ P+V+TY+ LI+ YC + R  +A  + D M  KG  P+   Y+ ++
Sbjct: 288 EAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILL 347

Query: 289 -GYLCKEKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKELVNQMSQMGC 335
            GY  K   I +VRDL++ M+ D   F               G +++A     +M Q G 
Sbjct: 348 HGYATKGALI-DVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGL 406

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG--KSLE- 392
            PDVV+Y+ V++  C+ G ++ A     QM   G  PN +S+T+ ++GLC  G  K +E 
Sbjct: 407 RPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEE 466

Query: 393 -AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
            A EMIN        P+AI  + +M  L +EG++ EA D    ++  G  P  V  N LI
Sbjct: 467 LAFEMIN----RGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLI 522

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
              C  GKMD + K +   ++ G   +   + SL+ G+ + G +E+AL+L  +M+  +KD
Sbjct: 523 DGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMF--RKD 580

Query: 512 PD--TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
                +T   ++  L + GR+  A EL MKM+ +G    + TY TV+   C+   V++ L
Sbjct: 581 VKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEAL 640

Query: 570 KLLEKMLSKQ---KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           ++ E + SK+     RT ++ VI  L   G ++EA  +   ++      D  T  ++++S
Sbjct: 641 RMFEDLRSKEFELDVRT-FSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKS 699

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
           ++ +G+   +  +   M       D  +   +  RL+ +G    A T + +  E+
Sbjct: 700 HIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEK 754



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 138/521 (26%), Positives = 241/521 (46%), Gaps = 29/521 (5%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +   M R G+         L+  +   G+L  A    ++  K       +  N  I 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 220 VLVVGNKLAKALRFL-ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG-- 276
            L  GN+   A+  +  RM   G TP+V +YN LIKG C   + ++A++L+  M   G  
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 277 -CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
            CSP+ VSY TV+                       + F  +G +++A  L ++M   G 
Sbjct: 195 NCSPNVVSYNTVI-----------------------DGFFKEGEVDKAYFLFHEMMGQGL 231

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PDVVTY ++++G C+   +D+A  +LQ M+  G  P+T +Y   + G C  G+  EA  
Sbjct: 232 PPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVR 291

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           ++         P+ +TYS+++    + G+ +EA  V   MV+KG  P     ++L+    
Sbjct: 292 LLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYA 351

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
            +G +   +  +   +  G       F  LI  + + G +++A++   +M      PD V
Sbjct: 352 TKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVV 411

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           +Y+T+I  L K GRVE+A     +M+S+GL P ++++ ++IH  C +G  + + +L  +M
Sbjct: 412 SYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEM 471

Query: 576 LSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           +++     A   N +++NLC  G + EA      V+    K D  + + L++ Y   G  
Sbjct: 472 INRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKM 531

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
             + K   RM +  L PD      +       G+ E+A  L
Sbjct: 532 DESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALAL 572


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 154/567 (27%), Positives = 267/567 (47%), Gaps = 18/567 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMAR-RGIECRPEAFSYLMV--AYSRAGKLRNAM 196
           D + Y ++L+ L   K  + A  +L +MA   G  C P   SY +V   +   G++    
Sbjct: 160 DTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPY 219

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   M    + P+++   T I  L       +A    ++M   G  PN  TYNCLI GY
Sbjct: 220 NLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGY 279

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
             + + K+ +++++EM  +G  PD  +Y +++ YLCK  R +E R   + M+        
Sbjct: 280 LSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKV 339

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  + +  +G + E    ++ M + G  PD   +    + + + G +D+A  +  +
Sbjct: 340 STYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNK 399

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M  HG  PN V+Y A ++ LC  G+  +A    N    E  TPN + ++ +++GL    K
Sbjct: 400 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 459

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
              A ++V EM+ +G  P  V  N LI +LC  G++   ++ +    + G   +  ++T 
Sbjct: 460 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 519

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G+C  G  +EA  + D M      P  VTY T++       R+++A  L  +ML KG
Sbjct: 520 LISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 579

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML-SKQKCRT-AYNQVIENLCSFGYLEEAG 602
           + P VVTY T++H   Q  R  +  +L   M+ S  KC    YN ++  LC    ++EA 
Sbjct: 580 VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAF 639

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           K+   +     + +  T  +++ + L  G    A  +   +    L+P++   + V+E L
Sbjct: 640 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENL 699

Query: 663 ILEGKSEEADTLMLRFVERGHIQPKSE 689
           I EG  EE D+L    +E+    P S+
Sbjct: 700 IEEGSLEEFDSL-FSAMEKNGTAPNSQ 725



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 229/495 (46%), Gaps = 35/495 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  +L  L K   C+ A+     M R+GI+ +   +  L+  Y+  G L      L
Sbjct: 303 DCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFL 362

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +  ++P+  I N           + KA+    +M+  G++PNV+ Y  LI   C L
Sbjct: 363 DLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKL 422

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R+ DA    ++M  +G +P+ V + +++  LC   +                       
Sbjct: 423 GRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW---------------------- 460

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            E A+ELV +M   G  P+ V +  ++   C VG + + ++++  M H G +P+  SYT 
Sbjct: 461 -ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 519

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G C  G++ EA ++ +       +P  +TY+ ++HG     ++ +A  + REM++KG
Sbjct: 520 LISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 579

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  V  N ++  L +  +   AK+     +N G   ++  +  ++ G C+   ++EA 
Sbjct: 580 VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAF 639

Query: 500 SLLDDMYLCKK--DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
            +     LC K    + +T+T +I AL K GR E+A +L   + + GLVP VVTYR V  
Sbjct: 640 KMFQS--LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAE 697

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRTA-----YNQVIENLCSFGYLEEAGKILGKVLRTA 612
              + G +E+   L   M   +K  TA      N ++  L   G +  AG  L K+    
Sbjct: 698 NLIEEGSLEEFDSLFSAM---EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 754

Query: 613 SKADASTCHVLVESY 627
              +AST  +L+  +
Sbjct: 755 FSVEASTTSLLMSIF 769



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 225/506 (44%), Gaps = 14/506 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K +L   A+ V + M   G +     ++ L+  Y   GK +  + +L
Sbjct: 233 DVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQML 292

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    + P+     + ++ L    +  +A  F + M   GI P V TY  LI GY   
Sbjct: 293 EEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATK 352

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VND 310
             + +    +D M   G SPD   +        K   I +  D+  KM         VN 
Sbjct: 353 GALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNY 412

Query: 311 SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
             L       GR+++A+   NQM   G  P++V + ++V G C V + ++A++++ +M  
Sbjct: 413 GALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLD 472

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN V +   +  LC+ G+ +E R +I+  E     P+A +Y+ ++ G    G+  E
Sbjct: 473 QGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDE 532

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  V   MV  G  PT V  N L+   C   ++D A    +E L KG    VV + +++ 
Sbjct: 533 AEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILH 592

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G  Q     EA  L  +M       D  TY  I++ L K+  V+EA ++   + SKGL  
Sbjct: 593 GLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL 652

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKIL 605
            ++T+  +I    + GR ED + L   + +         Y  V ENL   G LEE   + 
Sbjct: 653 NIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLF 712

Query: 606 GKVLRTASKADASTCHVLVESYLNKG 631
             + +  +  ++   + LV   L++G
Sbjct: 713 SAMEKNGTAPNSQMLNALVRRLLHRG 738



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 151/350 (43%), Gaps = 14/350 (4%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           RQ     + + Y  +++ L K      A+     M   G+      F+ L+       K 
Sbjct: 401 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 460

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A  ++  M    + PN +  NT I  L    ++ +  R ++ M+  G+ P+  +Y  L
Sbjct: 461 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPL 520

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMV 308
           I GYC   R  +A K+ D M   G SP +V+Y T++   C   RI +     R+++ K V
Sbjct: 521 ISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGV 580

Query: 309 NDS---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                        LF  + R  EAKEL   M   G   D+ TY  ++NG C+   +D+A 
Sbjct: 581 TPGVVTYNTILHGLFQTK-RFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAF 639

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           KM Q +   G + N +++T  +  L   G+  +A ++          PN +TY +V   L
Sbjct: 640 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENL 699

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
             EG L E   +   M K G  P    +N L++ L   G +  A  ++ +
Sbjct: 700 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSK 749


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 268/557 (48%), Gaps = 15/557 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y + ++   +T     A R+LR M   G      A+  ++  +   G    A  + 
Sbjct: 224 DVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELF 283

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  + P++   N  +H L     + ++ R  +++   G+ PN+ T+N  I+G C  
Sbjct: 284 DEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKE 343

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD--- 316
             +  A++L+  +  +G  PD V+Y TV+  LC++ R+ E  + + KMVN     +D   
Sbjct: 344 GSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTY 403

Query: 317 ---------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +G + +A  ++      G  PD  TY ++VNGFC+ G+ DQA  + +    
Sbjct: 404 NSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLG 463

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G +P+ + Y   + GLC  G  L A +++N   E+   P+  TY+++++GL + G LS+
Sbjct: 464 KGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSD 523

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++ + + KG  P     N L+   CR+ K+D A + +    ++G   +V+ + +L+ 
Sbjct: 524 ANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLN 583

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C+    EE + +   M      P+ +TY TII++L  + +V EA +L+ +M SKGL P
Sbjct: 584 GLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTP 643

Query: 548 TVVTYRTVIHRYCQVGRVED---LLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKI 604
            VV++ T+I  +C+VG ++    L + +EK          YN +I        ++ A ++
Sbjct: 644 DVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRL 703

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
             ++ +     D  T  VL++ +   G     YK       +  IP L    +V   L +
Sbjct: 704 FSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCV 763

Query: 665 EGKSEEADTLMLRFVER 681
           E K +EA  ++   V++
Sbjct: 764 EHKVQEAVGIIHLMVQK 780



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 237/499 (47%), Gaps = 48/499 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   +  ++  L K      ++R+   + +RG+      F+  +    + G L  A+ +L
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLL 353

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + +  + P+++  NT I  L   +++ +A   L +M   G  PN  TYN +I GYC  
Sbjct: 354 GCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKK 413

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE----KRIKEVRDLMEKMVNDSNLFH 315
             + DA +++ +   KG  PD+ +Y +++   C++    + +   +D + K +  S + +
Sbjct: 414 GMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVY 473

Query: 316 D--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +        QG I  A +L+N+M++ GC PD+ TY  ++NG C++G L  A  ++     
Sbjct: 474 NTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAIT 533

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+  +Y   ++G C   K   A E++N    +  TP+ ITY+ +++GL +  K  E
Sbjct: 534 KGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEE 593

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
             ++ + M +KG  P  +  N +I+SLC   K++ A   + E  +KG   +VV+F +LI 
Sbjct: 594 VMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLIT 653

Query: 488 GFCQKGDLEEA------------------------------------LSLLDDMYLCKKD 511
           GFC+ GDL+ A                                    L L  +M     D
Sbjct: 654 GFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCD 713

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD  TY  +ID   K G V +  + +++ + KG +P++ T+  V++  C   +V++ + +
Sbjct: 714 PDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGI 773

Query: 572 LEKMLSKQKCRTAYNQVIE 590
           +  M+ K       N + E
Sbjct: 774 IHLMVQKDIVPDTVNTIFE 792



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 238/484 (49%), Gaps = 14/484 (2%)

Query: 183 MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
           M  Y R GK++ A+     M      P++   N  +++LV      +A +   RM+   +
Sbjct: 162 MRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKV 221

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
             +V TY   IK +C   R   A++L+  MP+ GC  + V+Y TV+    +       R+
Sbjct: 222 ESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARE 281

Query: 303 LMEKMVN-----DSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           L ++M+      D   F+        +G + E++ L +++ + G  P++ T+   + G C
Sbjct: 282 LFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLC 341

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           + G LD+A ++L  +   G +P+ V+Y   + GLC   + +EA E ++      + PN  
Sbjct: 342 KEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDF 401

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY+ ++ G  ++G + +A  ++++ V KGF P       L+   C++G  D A    ++ 
Sbjct: 402 TYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDG 461

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           L KG   +++ + +LI+G CQ+G +  AL L+++M      PD  TY  II+ L K G +
Sbjct: 462 LGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCL 521

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQV 588
            +A  L+   ++KG +P + TY T++  YC+  +++  ++L+ +M S+        YN +
Sbjct: 522 SDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTL 581

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           +  LC     EE  +I   +       +  T + ++ES  N      A  +   M ++ L
Sbjct: 582 LNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGL 641

Query: 649 IPDL 652
            PD+
Sbjct: 642 TPDV 645



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 204/460 (44%), Gaps = 62/460 (13%)

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
           +I++A+   + M L  C P   SY  +M                       N+  + G  
Sbjct: 170 KIQEAVDTFERMDLFNCDPSVYSYNAIM-----------------------NILVEFGYF 206

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            +A ++  +M       DV TYT  +  FCR G    A ++L+ M   GC  N V+Y   
Sbjct: 207 NQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTV 266

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           + G    G +  ARE+ +   E    P+  T++ ++H L ++G + E+  +  +++K+G 
Sbjct: 267 VTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGV 326

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFM-------------------------------QE 469
            P     N+ IQ LC+EG +D A + +                               +E
Sbjct: 327 CPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEE 386

Query: 470 CLNK----GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
           CL+K    G   N   + S+I G+C+KG + +A  +L D       PD  TY ++++   
Sbjct: 387 CLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFC 446

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-- 583
           ++G  ++A  +    L KGL P+++ Y T+I   CQ G +   L+L+ +M +++ C+   
Sbjct: 447 QDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEM-AEKGCKPDI 505

Query: 584 -AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             YN +I  LC  G L +A  ++G  +      D  T + LV+ Y  +     A ++  R
Sbjct: 506 WTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNR 565

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           M+++ + PD+     +   L    KSEE   +     E+G
Sbjct: 566 MWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 160/372 (43%), Gaps = 5/372 (1%)

Query: 314 FHDQGRIEEAKELVNQM-SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
           FH  G+  E + L+++M S +        Y   +  + R G++ +A    ++M    C P
Sbjct: 131 FH--GKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDP 188

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           +  SY A +N L   G   +A ++    +++    +  TY++ +    R G+   A  ++
Sbjct: 189 SVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLL 248

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           R M   G F   V    ++      G  D A++   E L      +V  F  L+   C+K
Sbjct: 249 RNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKK 308

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G + E+  L D +      P+  T+   I  L K G ++ A  L+  +  +GL P VVTY
Sbjct: 309 GFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTY 368

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
            TVI   C+  RV +  + L KM++   +     YN +I+  C  G + +A +IL   + 
Sbjct: 369 NTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVF 428

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
              K D  T   LV  +   G P  A  V      + L P + +   + + L  +G    
Sbjct: 429 KGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILP 488

Query: 671 ADTLMLRFVERG 682
           A  LM    E+G
Sbjct: 489 ALQLMNEMAEKG 500


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 138/526 (26%), Positives = 273/526 (51%), Gaps = 30/526 (5%)

Query: 109 RQICAVLRSQADERVALQFFYWADRQ-WRYR---HDPIVYYMMLEILSKTKLCQGAKRVL 164
           R+I     ++ +  ++  F ++ +R  + Y+    DP V+ +  ++L +  L   A++  
Sbjct: 3   REIICDFWAKPNLDISNSFTHFVERLIYTYKDWGSDPHVFDVFFQVLVEAGLLNEARKFF 62

Query: 165 RLMARRGIECRPEAFS-YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
             +   G+     + + YL    S+   L   + V S   +  V  N    N  ++ L  
Sbjct: 63  DKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFR 122

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
             K+ +A   L RM+  G  P+V++Y  +I GYC +  ++  ++L+ EM LKG  P+  +
Sbjct: 123 LGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYT 182

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           Y +++  LCK                        G++ E ++++ +M + G  PD V YT
Sbjct: 183 YSSIILLLCK-----------------------SGKVVEGEKVLREMMKRGVFPDHVIYT 219

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            +++GFC++G    A K+  +M      P++++++A + GL  +GK +EA ++ N   ++
Sbjct: 220 TLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKK 279

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
            + P+ +TY+ ++ G  + G++ +A  +  +MV+ G  P  V    L   LC+ G++D A
Sbjct: 280 GFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTA 339

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            + + E   KG  +N+  + +++ G C+ G++ +A+ L+++M      PDT+TYTT++DA
Sbjct: 340 NELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDA 399

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
             K G + +A EL+ +ML +GL PTVVT+  +++  C  G++ED  +LL+ ML K     
Sbjct: 400 YYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPN 459

Query: 584 A--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           A  YN +++  C    +  + +I   +       D++T ++L++ +
Sbjct: 460 AATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGH 505



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 257/518 (49%), Gaps = 29/518 (5%)

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           +V     + G+    E+++ LM +  R GK+R A ++L  M+     P+++   T I   
Sbjct: 96  KVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY 155

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
               +L K ++ ++ MQL G+ PN+ TY+ +I   C   ++ +  K++ EM  +G  PD 
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDH 215

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFH-------DQGRIEEAKELVNQ 329
           V Y T++   CK    +    L  +M     V DS  F          G++ EA +L N+
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M + G  PD VTYTA+++G+C++GE+ +A  +  QM   G  PN V+YTA  +GLC +G+
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
              A E+++    +    N  TY+ +++GL + G + +A  ++ EM + G  P  +    
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L+ +  + G+M  A++ ++E L++G    VV F  L+ G C  G LE+   LL  M    
Sbjct: 396 LMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKG 455

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P+  TY +I+        +  +TE+   M ++G+VP   TY  +I  +C+   +++  
Sbjct: 456 IMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAW 515

Query: 570 KLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            L ++M+ K+   TA  YN +I+       L EA ++  ++ R    A A   ++ V+  
Sbjct: 516 FLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMN 575

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
             +G               N+   L+LC +  E+ +L+
Sbjct: 576 YEEG---------------NMETTLELCDEAIEKCLLD 598



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 187/369 (50%), Gaps = 3/369 (0%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           ++ ++  Q+G   +  +Y  ++N   R+G++ +A  +L +M   GC P+ VSYT  ++G 
Sbjct: 96  KVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY 155

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           CH G+  +  +++   + +   PN  TYS ++  L + GK+ E   V+REM+K+G FP  
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDH 215

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V    LI   C+ G    A K   E   +    + + F++LI G    G + EA  L ++
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M     +PD VTYT +ID   K G +++A  L  +M+  GL P VVTY  +    C+ G 
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335

Query: 565 VEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           ++   +LL +M  K  Q   + YN ++  LC  G + +A K++ ++       D  T   
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L+++Y   G  + A ++   M +R L P +     +   L + GK E+ + L+   +E+G
Sbjct: 396 LMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKG 455

Query: 683 HIQPKSEEH 691
            I P +  +
Sbjct: 456 -IMPNAATY 463



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/418 (20%), Positives = 177/418 (42%), Gaps = 25/418 (5%)

Query: 57  RVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLL-RSLKPRQICAVL 115
           +V RE ++R V  +      L+   C+L   ++A+    E E R ++  S+    +   L
Sbjct: 201 KVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGL 260

Query: 116 RSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECR 175
                   A + F    ++  +  D + Y  +++   K    + A  +   M + G+   
Sbjct: 261 SGSGKVVEADKLFNEMIKK-GFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPN 319

Query: 176 PEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
              ++ L     ++G+L  A  +L  M +  +  N+   NT ++ L     + +A++ +E
Sbjct: 320 VVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLME 379

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            M+ AG+ P+ +TY  L+  Y     +  A +L+ EM  +G  P  V++  +M  LC   
Sbjct: 380 EMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCM-- 437

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                                 G++E+ + L+  M + G +P+  TY +++  +C    +
Sbjct: 438 ---------------------SGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNM 476

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
             + ++ + M   G  P++ +Y   + G C      EA  +     E+ +   A +Y+ +
Sbjct: 477 RISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNAL 536

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           + G  +  KL EA  +  EM ++G   +    NL +     EG M+   +   E + K
Sbjct: 537 IKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 159/566 (28%), Positives = 276/566 (48%), Gaps = 58/566 (10%)

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV-----GNKLAKALRFLERMQL 239
           AY   G+   A  + + M++  + P LL CNT ++ LV        +L+KA+ F + +++
Sbjct: 133 AYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAV-FTDFIKI 191

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
            G+  N  ++N LI G C  +R  +AI+++ +M   GC PD ++Y T++  LCK+ R+ E
Sbjct: 192 -GVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250

Query: 300 VRDLMEKMVNDSNLFHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
            RDL+  M N   LF ++             G ++EA  ++  MSQ   +PD  TY  ++
Sbjct: 251 ARDLLLDMKN-KGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMI 309

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +GFC+ G + +A ++ ++M +    P+ V+Y   +NG   +G S E  ++I   E     
Sbjct: 310 SGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMK 369

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN++TY+V++    ++GK+ E    VR+M + G  P  V  N LI   C+ GKMD A + 
Sbjct: 370 PNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRL 429

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEE----------------------------- 497
           M E   KG  ++ V   +++R  C++  L+E                             
Sbjct: 430 MDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFK 489

Query: 498 ------ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
                 AL L D+M   +  P  +TY ++I  L + G+  +A + + ++L  GLVP  +T
Sbjct: 490 HEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEIT 549

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y T+IH YCQ G+VE   +   KM+ K  +      N ++  LC  G LE+A K+    +
Sbjct: 550 YNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWI 609

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
                 DA + + ++ S   +     A+ +   M  + L PD      +   L   G+ +
Sbjct: 610 SKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMK 669

Query: 670 EADTLMLRFVERGHIQPKSEEHLQRQ 695
           +A+  + +  E+G  + +  E  +RQ
Sbjct: 670 DAEEFISKIAEKGKSENQFLELGKRQ 695



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 247/503 (49%), Gaps = 37/503 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  +L+ L K      A+ +L  M  +G+      F+ L+V   R G L+ A  V+
Sbjct: 231 DNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVI 290

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M + +V P+    N  I       ++A+A+R  E M+   ++P+V+TYN LI G  + 
Sbjct: 291 ELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEH 350

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
              ++  KLI+EM  +G  P+ V+Y  ++ +  K                       +G+
Sbjct: 351 GSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVK-----------------------KGK 387

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++E  + V +M + GC+PD+VTY  +++  C+VG++D+A +++ +M   G K + V+   
Sbjct: 388 MDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNT 447

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L  LC   K  EA +++ ++    +  + ++Y  ++ G  +  K S+A  +  EM +K 
Sbjct: 448 MLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKE 507

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P+ +  N +I  LC+ GK + A   + E L  G   + + + ++I G+CQ+G +E+A 
Sbjct: 508 IIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAF 567

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
              + M      PD VT  T++  L K G +E+A +L    +SKG     V+Y T+I   
Sbjct: 568 QFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSL 627

Query: 560 CQVGRVEDLLKLLEKMLSKQ---KCRTAYNQVIENLCSFGYLEEAGKILGKV-------- 608
           C+  R  +   LLE+M  K+    C T YN ++  L   G +++A + + K+        
Sbjct: 628 CKEKRFGEAFDLLEEMEEKKLGPDCYT-YNAILGGLTDAGRMKDAEEFISKIAEKGKSEN 686

Query: 609 --LRTASKADASTCHVLVESYLN 629
             L    + DA T  +  E + N
Sbjct: 687 QFLELGKRQDARTSEIPQEPHPN 709



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 130/293 (44%), Gaps = 37/293 (12%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R+  Y  D + Y  ++    K +    A R+   M  + I      ++ ++    + GK 
Sbjct: 469 RRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKT 528

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A+  L  + ++ + P+ +  NT IH      ++ KA +F  +M      P+V+T N L
Sbjct: 529 NQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTL 588

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           + G C    ++ A+KL +    KG   D VSY T++  LCKEKR  E  DL+E+M     
Sbjct: 589 LCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEM----- 643

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                   EE K        +G  PD  TY A++ G    G +  A++ + ++   G   
Sbjct: 644 --------EEKK--------LG--PDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSE 685

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSE-EEWWTPNAITYSVVMHGLRREGK 424
           N      FL      GK  +AR    TSE  +   PNAI YS  ++ L  +G+
Sbjct: 686 N-----QFL----ELGKRQDAR----TSEIPQEPHPNAIAYSNKINELCSQGR 725


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 170/645 (26%), Positives = 296/645 (45%), Gaps = 72/645 (11%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           LR LL SL P  + ++     D + AL FF W   +  ++H+   Y  ML IL + +L  
Sbjct: 59  LRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLG 118

Query: 159 GAKR--------------------VLRLMARRG-IECRP--EAFSYLMVAYSRAGKLRNA 195
            A++                    V R M   G  + +P    ++ ++++ S+   +   
Sbjct: 119 VAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEM 178

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             V   +    ++PN+   N  ++       + +A  +  ++  AG+ P+  TY  LI G
Sbjct: 179 KTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILG 238

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---- 311
           +C    + +A ++   MP KGC  ++VSY  ++  LC+  RI E   L   M  D+    
Sbjct: 239 HCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPT 298

Query: 312 ---------------------NLFHD----------------------QGRIEEAKELVN 328
                                NLF++                      + +++EA+++++
Sbjct: 299 VRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLS 358

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +MS+ G IP VVTY A+++G+C+ G +D A ++L  M  + C PNT +Y   + GLC   
Sbjct: 359 EMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKR 418

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K  +A  ++N   E   +P+ ITY+ ++HG  +   L  A  ++  M + G  P     +
Sbjct: 419 KVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS 478

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           + I +LC+EG+++ A         KG   N V +T+LI G+C+ G ++ A SLL+ M   
Sbjct: 479 VFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND 538

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P++ TY  +I+ L K  +++EA+ L+ KML+ G+ PTVVTY  +I    + G  +  
Sbjct: 539 ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHA 598

Query: 569 LKLLEKMLS--KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           LK+   M+S   Q     Y   +    S G LEE   ++ K+       D  T  VL++ 
Sbjct: 599 LKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDG 658

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           Y   G+   A+     M +    P L +   + + L  E + +E 
Sbjct: 659 YARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET 703



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 235/473 (49%), Gaps = 20/473 (4%)

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG---CSPDKVSYYTV 287
           L  L R +L G+   +     +IK  C +  +   +++  +M   G     P    Y T+
Sbjct: 108 LNILIRARLLGVAEKIRI--SMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTI 165

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGC 335
           +  L K   I E++ +  +++N+             N +   G + EA+   +++ Q G 
Sbjct: 166 LMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGL 225

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PD  TYT+++ G CR   +D A ++   M   GC+ N VSYT  ++GLC  G+  EA +
Sbjct: 226 HPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALK 285

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +     E+   P   TY+V+++ L   G+  EA ++  EM +KG  P      +LI  LC
Sbjct: 286 LFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLC 345

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           +E KMD A+K + E   KG   +VV + +LI G+C++G +++A  +LD M      P+T 
Sbjct: 346 KENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTR 405

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY  +I  L K  +V +A  L+ KML + L P+++TY ++IH  C+V  +E   +LL  M
Sbjct: 406 TYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLM 465

Query: 576 LSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
                   +  Y+  I+ LC  G +EEAG +   V     KA+      L++ Y   G  
Sbjct: 466 NENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKI 525

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
            +AY +  RM N   +P+      + E L  E K +EA +L+ + +  G ++P
Sbjct: 526 DVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG-VKP 577



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/556 (25%), Positives = 254/556 (45%), Gaps = 47/556 (8%)

Query: 174 CRPEAFSYLMVAYSRAGKLRN--AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P   +Y ++ Y+ +G  R   A+ + + M++    PN+      I  L   NK+ +A 
Sbjct: 295 CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEAR 354

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
           + L  M   G+ P+V+TYN LI GYC    I DA +++D M    C P+  +Y  ++  L
Sbjct: 355 KMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGL 414

Query: 292 CKEKRIKEVRDLMEKM---------VNDSNLFHDQGRI---EEAKELVNQMSQMGCIPDV 339
           CK++++ +   L+ KM         +  ++L H Q ++   E A  L++ M++ G +PD 
Sbjct: 415 CKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQ 474

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            TY+  ++  C+ G +++A  +   +   G K N V YTA ++G C  GK   A  ++  
Sbjct: 475 WTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
              +   PN+ TY+V++ GL +E K+ EA  +V +M+  G  PT V   +LI  + ++G 
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA 594

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
            D A K     ++ G   +V  +T+ +  +  +G LEE   ++  M      PD VTYT 
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTV 654

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL----------- 568
           +ID  ++ G    A + +  M+  G  P++     +I       R+++            
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714

Query: 569 ------------------LKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGK 607
                             LKL EKM+ +  C    + Y  +I   C    LEEA  ++  
Sbjct: 715 VNSVDIADVWKTLEYEIALKLFEKMV-EHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 773

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +            + L++     G+   A ++   M    L+P L+  K +   L +EG 
Sbjct: 774 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 833

Query: 668 SEEADTLMLRFVERGH 683
           +E+A  +    +  G+
Sbjct: 834 NEKAKAVFHGLLSCGY 849



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 229/507 (45%), Gaps = 60/507 (11%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  +++   K  +   A  +L LM      C P   +Y  L+    +  K+  AM +L
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNS--CGPNTRTYNELICGLCKKRKVHKAMALL 427

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M +  ++P+L+  N+ IH     N L  A R L  M   G+ P+  TY+  I   C  
Sbjct: 428 NKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKE 487

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD--- 316
            R+++A  L D +  KG   ++V Y  ++   CK  +I     L+E+M+ND+ L +    
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547

Query: 317 ---------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    + +++EA  LV +M  MG  P VVTYT ++    + G  D A K+   M  
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G +P+  +YTAFL+     G   E  ++I    EE   P+ +TY+V++ G  R G    
Sbjct: 608 LGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHR 667

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKM--------------------------- 460
           A D ++ MV  G  P+   +++LI++L  E +M                           
Sbjct: 668 AFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTL 727

Query: 461 --DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
             + A K  ++ +  GC ++V  + +LI GFCQ+  LEEA  L+  M      P    Y 
Sbjct: 728 EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYN 787

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           +++D   K G   EA  L+  M+  GL+P + +Y+ ++      G             S 
Sbjct: 788 SLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEG-------------SN 834

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKIL 605
           +K +  ++ ++   C + Y E A K+L
Sbjct: 835 EKAKAVFHGLLS--CGYNYDEVAWKVL 859



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 180/403 (44%), Gaps = 4/403 (0%)

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           SY +++  L + + +     +   M+       D   + E    +N   +    P +  Y
Sbjct: 103 SYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCY 162

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             ++    +   +D+ K +  ++ ++   PN  ++ A +NG C  G  +EA    +   +
Sbjct: 163 NTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQ 222

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               P+  TY+ ++ G  R   +  A +V   M +KG     V    LI  LC  G+++ 
Sbjct: 223 AGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINE 282

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A K   +     C   V  +T LI      G   EAL+L ++M     +P+  TYT +ID
Sbjct: 283 ALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLID 342

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--- 579
            L K  +++EA +++ +M  KGL+P+VVTY  +I  YC+ G ++D  ++L+ M S     
Sbjct: 343 GLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGP 402

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
             RT YN++I  LC    + +A  +L K+L         T + L+           AY++
Sbjct: 403 NTRT-YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              M    L+PD        + L  EG+ EEA TL      +G
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/437 (23%), Positives = 183/437 (41%), Gaps = 41/437 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  ++    K    + A R+L LM   G+      +S  +    + G++  A  +   
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           ++   V  N +I    I       K+  A   LERM      PN  TYN LI+G C   +
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
           +K+A  L+ +M   G  P  V+Y  ++G + K+        +   MV+            
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             + +  QG +EE  +++ +M++ G +PD+VTYT +++G+ R+G   +A   L+ M   G
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG 679

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSE---------------------------- 401
           CKP+    +  +  L H  +  E R  I                                
Sbjct: 680 CKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKM 739

Query: 402 -EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
            E   T +   Y  ++ G  ++ +L EA  +V  M ++G  P+    N L+   C+ G  
Sbjct: 740 VEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVY 799

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             A + +   +  G    + ++  L+ G   +G  E+A ++   +  C  + D V +  +
Sbjct: 800 AEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVL 859

Query: 521 IDALSKNGRVEEATELM 537
           ID L K   V+E +EL+
Sbjct: 860 IDGLLKRDLVDECSELI 876



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/408 (22%), Positives = 162/408 (39%), Gaps = 43/408 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y + ++ L K    + A  +   +  +G++     ++ L+  Y + GK+  A  +L
Sbjct: 473 DQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLL 532

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M   A  PN    N  I  L    K+ +A   + +M   G+ P V+TY  LI      
Sbjct: 533 ERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKD 592

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ-- 317
                A+K+ + M   G  PD  +Y   +     +  ++EV D++ KM N+  +  D   
Sbjct: 593 GAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM-NEEGILPDLVT 651

Query: 318 -----------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR----------VG--- 353
                      G    A + +  M   GC P +   + ++               +G   
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDS 711

Query: 354 ----------------ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
                           E + A K+ ++M  HGC  +   Y A + G C   +  EA+ ++
Sbjct: 712 VSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLV 771

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +  +E   +P+   Y+ ++    + G  +EA  +V  MV+ G  P      LL+  L  E
Sbjct: 772 HHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIE 831

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
           G  + AK      L+ G   + V +  LI G  ++  ++E   L+D M
Sbjct: 832 GSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIM 879



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 112/302 (37%), Gaps = 52/302 (17%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y+ D   Y   L       + +    V+  M   GI      ++ L+  Y+R G    A 
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK--------------------------- 229
             L  M      P+L I +  I  L   N++ +                           
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEY 729

Query: 230 --ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
             AL+  E+M   G T +V  Y  LI G+C   R+++A  L+  M  +G SP +  Y ++
Sbjct: 730 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSL 789

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +   CK                        G   EA  LV+ M + G +P + +Y  +V 
Sbjct: 790 LDCCCK-----------------------LGVYAEAVRLVDAMVENGLLPLLESYKLLVC 826

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G    G  ++AK +   +   G   + V++   ++GL       E  E+I+  EE+  T 
Sbjct: 827 GLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATA 886

Query: 408 NA 409
            A
Sbjct: 887 QA 888


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 248/481 (51%), Gaps = 52/481 (10%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R+G    ++++L  M +    P++++C   I        + KA+R +E ++  G  P+V 
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            YN LI G+C ++RI DA +++D M  K  SPD V+Y  ++G LC   ++     ++ ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 308 VNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           ++D+                 +G ++EA +L+++M   G  PD+ TY  ++ G C+ G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D+A +M++ +   G +P+ +SY   L  L + GK  E  +++     E   PN +TYS++
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +  L R+GK+ EA ++++ M +KG  P     + LI + CREG++D A +F++  ++ GC
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLD-------------------------------- 503
             ++VN+ +++   C+ G  ++AL +                                  
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 504 ---DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
              +M     DPD +TY ++I  L + G V+EA EL++ M S    P+VVTY  V+  +C
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519

Query: 561 QVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           +  R+ED + +LE M+    CR   T Y  +IE +   GY  EA ++   ++R  + ++ 
Sbjct: 520 KAHRIEDAINVLESMVG-NGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEY 578

Query: 618 S 618
           S
Sbjct: 579 S 579



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 196/409 (47%), Gaps = 12/409 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++    K      A RVL  M  +        ++ ++ +    GKL  A+ VL
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + +      P ++     I   ++   + +AL+ ++ M   G+ P++ TYN +I+G C  
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNLFH- 315
             +  A +++  + LKG  PD +SY  ++  L  + + +E   LM KM +   D N+   
Sbjct: 277 GMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336

Query: 316 --------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     G+IEEA  L+  M + G  PD  +Y  ++  FCR G LD A + L+ M  
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+ V+Y   L  LC NGK+ +A E+     E   +PN+ +Y+ +   L   G    
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++ EM+  G  P  +  N +I  LCREG +D A + + +  +     +VV +  ++ 
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
           GFC+   +E+A+++L+ M      P+  TYT +I+ +   G   EA EL
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 179/343 (52%), Gaps = 4/343 (1%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PDV  Y A++NGFC++  +D A ++L +M      P+TV+Y   +  LC  GK   A ++
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +N    +   P  ITY++++     EG + EA  ++ EM+ +G  P     N +I+ +C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           EG +D A + ++    KG   +V+++  L+R    +G  EE   L+  M+  K DP+ VT
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y+ +I  L ++G++EEA  L+  M  KGL P   +Y  +I  +C+ GR++  ++ LE M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 577 SKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           S   C      YN V+  LC  G  ++A +I GK+       ++S+ + +  +  + G  
Sbjct: 396 S-DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
           + A  +   M +  + PD      +   L  EG  +EA  L++
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 152/323 (47%), Gaps = 27/323 (8%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           + D   Y  ++  + K  +   A  ++R +  +G E  P+  SY  L+ A    GK    
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSE--PDVISYNILLRALLNQGKWEEG 317

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +++ M      PN++  +  I  L    K+ +A+  L+ M+  G+TP+  +Y+ LI  
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           +C   R+  AI+ ++ M   GC PD V+Y TV+  LCK                      
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK---------------------- 415

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G+ ++A E+  ++ ++GC P+  +Y  + +     G+  +A  M+ +M  +G  P+ +
Sbjct: 416 -NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEI 474

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y + ++ LC  G   EA E++       + P+ +TY++V+ G  +  ++ +A +V+  M
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534

Query: 436 VKKGFFPTPVEINLLIQSLCREG 458
           V  G  P      +LI+ +   G
Sbjct: 535 VGNGCRPNETTYTVLIEGIGFAG 557



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 138/270 (51%), Gaps = 3/270 (1%)

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           + H   R G   E+  ++  MV+KG+ P  +    LI+       +  A + M E L K 
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              +V  + +LI GFC+   +++A  +LD M      PDTVTY  +I +L   G+++ A 
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
           +++ ++LS    PTV+TY  +I      G V++ LKL+++MLS+  +     YN +I  +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G ++ A +++  +    S+ D  + ++L+ + LN+G      K+  +MF+    P++
Sbjct: 274 CKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
                +   L  +GK EEA  L+    E+G
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKG 363



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 130/269 (48%), Gaps = 3/269 (1%)

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C +G  +E+  ++ T   + + P+ I  + ++ G      + +A  V+ E+++K   P  
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
              N LI   C+  ++D A + +    +K  + + V +  +I   C +G L+ AL +L+ 
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           +      P  +TYT +I+A    G V+EA +LM +MLS+GL P + TY T+I   C+ G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 565 VEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           V+   +++  +  K  +    +YN ++  L + G  EE  K++ K+       +  T  +
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           L+ +    G    A  +   M  + L PD
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPD 367


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 164/544 (30%), Positives = 265/544 (48%), Gaps = 32/544 (5%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  +L  LS   L   A+R L  M R G+      ++ L+ A    G+L  A+ V+  M
Sbjct: 120 AYNAVLLALSDASL-PSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDM 178

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG-ITPNVLTYNCLIKGYCDLHR 261
           + A  APN +  NT +       +L  A R +  M+  G   PN++T+N ++ G C   R
Sbjct: 179 RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSN 312
           ++ A K+ DEM  +G +PD VSY T++   CK   + E          R L+  +V  ++
Sbjct: 239 MEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTS 298

Query: 313 LFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L H     G +E+A  LV QM + G   + VT+TA+++GFC+ G LD A   +++M   G
Sbjct: 299 LIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 358

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            +P+ V Y A +NG C  G+   ARE+I   E +   P+ +TYS ++ G  + G L  A 
Sbjct: 359 IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAF 418

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            + ++M+KKG  P  +  + LI+ LC E +++ A +  +  L  G   +   +T+LI G 
Sbjct: 419 QLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 478

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C++G++E+ALSL D+M      PD VTY+ +I+ LSK+ R +EA  L+ K+  +  VP  
Sbjct: 479 CKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 538

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           + Y  ++   C     + ++ LL                 +  C  G ++EA K+   +L
Sbjct: 539 IKYDALM-LCCSKAEFKSVVALL-----------------KGFCMKGLMKEADKVYQSML 580

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
               K D S   +L+  +   G    A     +M      P+      +   L  EG   
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVV 640

Query: 670 EADT 673
           EAD 
Sbjct: 641 EADN 644



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 223/473 (47%), Gaps = 65/473 (13%)

Query: 170 RGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVA-PNLLICNTAIHVLVVGNK 226
           RG  C P A +Y  L+ A+ RAG+L  A  V+S+M++   A PNL+  N+ ++ L    +
Sbjct: 179 RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +  A +  + M   G+ P+V++YN L+ GYC +  + +++ +  EM  +G  PD V++ +
Sbjct: 239 MEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTS 298

Query: 287 VMGYLCKEKRIKEVRDLMEKM------VNDSNL------FHDQGRIEEAKELVNQMSQMG 334
           ++   CK   +++   L+ +M      +N+         F  +G +++A   V +M + G
Sbjct: 299 LIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 358

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P VV Y A++NG+C++G +D A++++++M     KP+ V+Y+  ++G C  G    A 
Sbjct: 359 IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAF 418

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           ++     ++   P+AITYS ++ GL  E +L++AC++   M++ G  P       LI   
Sbjct: 419 QLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 478

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFT------------------------------- 483
           C+EG ++ A     E + KG   +VV ++                               
Sbjct: 479 CKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 538

Query: 484 -------------------SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
                              +L++GFC KG ++EA  +   M       D   Y+ +I   
Sbjct: 539 IKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 598

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
            + G V +A     +ML  G  P   +  +++    + G V +    ++ +L+
Sbjct: 599 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLT 651



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 195/451 (43%), Gaps = 66/451 (14%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + +  M+  L K    +GA++V   M R G+   P+  SY  L+  Y + G L  ++ V 
Sbjct: 224 VTFNSMVNGLCKAGRMEGARKVFDEMVREGLA--PDVVSYNTLLSGYCKVGCLHESLAVF 281

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL------------------------- 234
           S M +  + P+++   + IH       L +A+  +                         
Sbjct: 282 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 341

Query: 235 ----------ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
                     E M+  GI P+V+ YN LI GYC L R+  A +LI EM  K   PD V+Y
Sbjct: 342 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 401

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQ 332
            T++   CK   +     L +KM+    L              ++ R+ +A EL   M Q
Sbjct: 402 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           +G  PD  TYT +++G C+ G +++A  +  +M   G  P+ V+Y+  +NGL  + ++ E
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521

Query: 393 AREMINTSEEEWWTPNAITYSVVM---------------HGLRREGKLSEACDVVREMVK 437
           A  ++     E   P+ I Y  +M                G   +G + EA  V + M+ 
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 581

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           + +       ++LI   CR G +  A  F ++ L  G + N  +  SL+RG  ++G + E
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 641

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           A + + D+  C    D      +ID   K G
Sbjct: 642 ADNAIQDLLTCCPLADAEASKALIDLNRKEG 672



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 171/360 (47%), Gaps = 27/360 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  ++    K    + A  ++  M  RG+      F+ L+  + + G L +A+  +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+K  + P+++  N  I+      ++  A   +  M+   + P+V+TY+ +I GYC +
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
             +  A +L  +M  KG  PD ++Y +++  LC+EKR+ +  +L E M+      D   +
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 315 HD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +G +E+A  L ++M + G +PDVVTY+ ++NG  +     +A ++L ++YH
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 531

Query: 368 HGCKPNTVSY---------------TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
               P+ + Y                A L G C  G   EA ++  +  +  W  +   Y
Sbjct: 532 EDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVY 591

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           S+++HG  R G + +A    ++M++ GF P       L++ L  EG +  A   +Q+ L 
Sbjct: 592 SILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLT 651



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 4/212 (1%)

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G A +V  + +++        L  A   L  M      P+  TY  ++ AL   GR+EEA
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV---EDLLKLLEKMLSKQKCRTAYNQVIE 590
             ++  M   G  P  VTY T++  +C+ G +   E ++ L+ +  + +     +N ++ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC  G +E A K+  +++R     D  + + L+  Y   G    +  V   M  R L+P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           D+     +       G  E+A  L+ +  ERG
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 165/563 (29%), Positives = 274/563 (48%), Gaps = 59/563 (10%)

Query: 183 MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA-- 240
           + AY  + +      + + M++    PNLL CNT ++ LV  N     +   E  Q A  
Sbjct: 145 LAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVK 204

Query: 241 -GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
            G+ PNV T+N LI GYC  +  ++A++LI++M   GC PD V+Y TV+  LCK  ++ +
Sbjct: 205 LGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQ 264

Query: 300 VRDLMEKMVNDSNLFHDQGR-------------IEEAKELVNQMSQMGCIPDVVTYTAVV 346
           VRDL+ +M N S LF ++               ++EA E++  M+  G +PDV TY  +V
Sbjct: 265 VRDLLLQMKN-SGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMV 323

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
            G C  G++D+A ++  +M      P+ V+Y   ++G   +  S  A +++   +     
Sbjct: 324 RGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVK 383

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            N +T+++++     EGK+ EA +V+ +MV+ GF P     N +I   C+ GKM  A K 
Sbjct: 384 ENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKM 443

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           M E   KG  ++     +L+   C +  L++A +L           D VTY T+I    K
Sbjct: 444 MDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFK 503

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR----VEDLLKLLEKMLSKQKCR 582
           + + + A +L  +M   G+V T++TY T+I   C  G+    V+ L +LLEK L   +  
Sbjct: 504 DEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDE-- 561

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV-----ESYLNKGIPLL-- 635
           +  N +I   C  G +E+A +   K++  + K D  TC++L+     E  L KG+ L   
Sbjct: 562 STSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNT 621

Query: 636 ----------------------------AYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
                                       A+ +   M  +NL PD      +   L   G+
Sbjct: 622 WISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGR 681

Query: 668 SEEADTLMLRFVERGHIQPKSEE 690
           +EEA+ L L+F E+G  Q K+++
Sbjct: 682 TEEAEKLALKFAEKGQ-QVKTQD 703



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 218/468 (46%), Gaps = 27/468 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +L  L K       + +L  M   G+      ++ L+  Y +   L+ A  V+
Sbjct: 245 DNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVI 304

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M    + P++   NT +  L    K+ +A+R  ++M+   + P+V+TYN LI G C  
Sbjct: 305 ELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDG-CFE 363

Query: 260 HRIKDA-IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
           HR  DA  KL++EM  +G   + V++  ++ + C E +I E  ++M KMV          
Sbjct: 364 HRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMV---------- 413

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
                        + G  PD  TY  ++NG+C+ G++ +A KM+ +M   G K +T +  
Sbjct: 414 -------------ESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLN 460

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             L+ +C   +  +A  +   + +  +  + +TY  ++ G  ++ +   A  +  EM + 
Sbjct: 461 TLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKET 520

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G   T +  N +I+ LC  GK D A   + E L KG   +      +I G+C +G +E+A
Sbjct: 521 GIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKA 580

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
               + M      PD  T   ++  L + G +E+   L    +SKG     VTY  +I  
Sbjct: 581 FQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISS 640

Query: 559 YCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKI 604
           +C+  R+ED   L+ +M  K  +  R  YN ++  L   G  EEA K+
Sbjct: 641 FCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKL 688



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 182/372 (48%), Gaps = 2/372 (0%)

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           ++E+     ++G  P+V T+  +++G+C     ++A +++ QM  +GC P+ V+Y   L 
Sbjct: 195 SREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLT 254

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
            LC   +  + R+++   +     PN  TY++++HG  +   L EA +V+  M  KG  P
Sbjct: 255 ALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLP 314

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
                N +++ LC EGK+D A +   +  +     +VV + +LI G  +    + A  L+
Sbjct: 315 DVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLV 374

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           ++M       + VT+  +I      G+++EA+ +M+KM+  G  P   TY T+I+ YC+ 
Sbjct: 375 EEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKA 434

Query: 563 GRVEDLLKLLEKMLSKQ-KCRT-AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           G++ +  K++++M  K  K  T   N ++  +C    L++A  +  K  +     D  T 
Sbjct: 435 GKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTY 494

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
             L+  Y        A K+   M    ++  +     +   L L GK+++A   +   +E
Sbjct: 495 GTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLE 554

Query: 681 RGHIQPKSEEHL 692
           +G +  +S  ++
Sbjct: 555 KGLVPDESTSNI 566



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 126/291 (43%), Gaps = 37/291 (12%)

Query: 160 AKRVLRL---MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
           A R L+L   M   GI      ++ ++     +GK   A+  L+ + +  + P+    N 
Sbjct: 507 ADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNI 566

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            IH       + KA +F  +M    + P++ T N L++G C    ++  + L +    KG
Sbjct: 567 IIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKG 626

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI 336
              D V+Y  ++   CKE+R+++  DLM +M              E K L          
Sbjct: 627 KPMDTVTYNIIISSFCKERRLEDAFDLMTEM--------------EGKNLE--------- 663

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKML-------QQMYHHGCKP----NTVSYTAFLNGLC 385
           PD  TY A+V G  + G  ++A+K+        QQ+      P    + + Y+  ++ LC
Sbjct: 664 PDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLC 723

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
             GK  +A ++   +E++  + N  TY  +M GL +  K      ++  MV
Sbjct: 724 TQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMV 774


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 170/645 (26%), Positives = 296/645 (45%), Gaps = 72/645 (11%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           LR LL SL P  + ++     D + AL FF W   +  ++H+   Y  ML IL + +L  
Sbjct: 59  LRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLG 118

Query: 159 GAKR--------------------VLRLMARRG-IECRP--EAFSYLMVAYSRAGKLRNA 195
            A++                    V R M   G  + +P    ++ ++++ S+   +   
Sbjct: 119 VAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEM 178

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             V   +    ++PN+   N  ++       + +A  +  ++  AG+ P+  TY  LI G
Sbjct: 179 KTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILG 238

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---- 311
           +C    + +A ++   MP KGC  ++VSY  ++  LC+  RI E   L   M  D+    
Sbjct: 239 HCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPT 298

Query: 312 ---------------------NLFHD----------------------QGRIEEAKELVN 328
                                NLF++                      + +++EA+++++
Sbjct: 299 VRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLS 358

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +MS+ G IP VVTY A+++G+C+ G +D A ++L  M  + C PNT +Y   + GLC   
Sbjct: 359 EMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKR 418

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K  +A  ++N   E   +P+ ITY+ ++HG  +   L  A  ++  M + G  P     +
Sbjct: 419 KVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS 478

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           + I +LC+EG+++ A         KG   N V +T+LI G+C+ G ++ A SLL+ M   
Sbjct: 479 VFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND 538

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P++ TY  +I+ L K  +++EA+ L+ KML+ G+ PTVVTY  +I    + G  +  
Sbjct: 539 ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHA 598

Query: 569 LKLLEKMLS--KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           LK+   M+S   Q     Y   +    S G LEE   ++ K+       D  T  VL++ 
Sbjct: 599 LKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDG 658

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           Y   G+   A+     M +    P L +   + + L  E + +E 
Sbjct: 659 YARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET 703



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 236/476 (49%), Gaps = 20/476 (4%)

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG---CSPDKVSY 284
           +  L  L R +L G+   +     +IK  C +  +   +++  +M   G     P    Y
Sbjct: 105 SSMLNILIRARLLGVAEKIRI--SMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCY 162

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
            T++  L K   I E++ +  +++N+             N +   G + EA+   +++ Q
Sbjct: 163 NTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQ 222

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G  PD  TYT+++ G CR   +D A ++   M   GC+ N VSYT  ++GLC  G+  E
Sbjct: 223 AGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINE 282

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A ++     E+   P   TY+V+++ L   G+  EA ++  EM +KG  P      +LI 
Sbjct: 283 ALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLID 342

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+E KMD A+K + E   KG   +VV + +LI G+C++G +++A  +LD M      P
Sbjct: 343 GLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGP 402

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           +T TY  +I  L K  +V +A  L+ KML + L P+++TY ++IH  C+V  +E   +LL
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462

Query: 573 EKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
             M        +  Y+  I+ LC  G +EEAG +   V     KA+      L++ Y   
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKV 522

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           G   +AY +  RM N   +P+      + E L  E K +EA +L+ + +  G ++P
Sbjct: 523 GKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG-VKP 577



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 263/566 (46%), Gaps = 39/566 (6%)

Query: 156 LCQGAK--RVLRLMARRGIE-CRPEAFSYLMVAYSRAGKLRN--AMYVLSMMQKAAVAPN 210
           LC+  +    L+L A    + C P   +Y ++ Y+ +G  R   A+ + + M++    PN
Sbjct: 274 LCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           +      I  L   NK+ +A + L  M   G+ P+V+TYN LI GYC    I DA +++D
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD 393

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHDQGRI- 320
            M    C P+  +Y  ++  LCK++++ +   L+ KM         +  ++L H Q ++ 
Sbjct: 394 LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVN 453

Query: 321 --EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
             E A  L++ M++ G +PD  TY+  ++  C+ G +++A  +   +   G K N V YT
Sbjct: 454 DLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYT 513

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           A ++G C  GK   A  ++     +   PN+ TY+V++ GL +E K+ EA  +V +M+  
Sbjct: 514 ALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  PT V   +LI  + ++G  D A K     ++ G   +V  +T+ +  +  +G LEE 
Sbjct: 574 GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEV 633

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             ++  M      PD VTYT +ID  ++ G    A + +  M+  G  P++     +I  
Sbjct: 634 DDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKN 693

Query: 559 YCQVGRVEDL------------------LKLLEKMLSKQKCR---TAYNQVIENLCSFGY 597
                R+++                   LKL EKM+ +  C    + Y  +I   C    
Sbjct: 694 LSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMV-EHGCTIDVSIYGALIAGFCQQER 752

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
           LEEA  ++  +            + L++     G+   A ++   M    L+P L+  K 
Sbjct: 753 LEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKL 812

Query: 658 VSERLILEGKSEEADTLMLRFVERGH 683
           +   L +EG +E+A  +    +  G+
Sbjct: 813 LVCGLYIEGSNEKAKAVFHGLLSCGY 838



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 229/496 (46%), Gaps = 49/496 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  +++   K  +   A  +L LM      C P   +Y  L+    +  K+  AM +L
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNS--CGPNTRTYNELICGLCKKRKVHKAMALL 427

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M +  ++P+L+  N+ IH     N L  A R L  M   G+ P+  TY+  I   C  
Sbjct: 428 NKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKE 487

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD--- 316
            R+++A  L D +  KG   ++V Y  ++   CK  +I     L+E+M+ND+ L +    
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547

Query: 317 ---------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    + +++EA  LV +M  MG  P VVTYT ++    + G  D A K+   M  
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G +P+  +YTAFL+     G   E  ++I    EE   P+ +TY+V++ G  R G    
Sbjct: 608 LGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHR 667

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKM------------------DGAKKFMQE 469
           A D ++ MV  G  P+   +++LI++L  E +M                  + A K  ++
Sbjct: 668 AFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEK 727

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            +  GC ++V  + +LI GFCQ+  LEEA  L+  M      P    Y +++D   K G 
Sbjct: 728 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGV 787

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVI 589
             EA  L+  M+  GL+P + +Y+ ++      G             S +K +  ++ ++
Sbjct: 788 YAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEG-------------SNEKAKAVFHGLL 834

Query: 590 ENLCSFGYLEEAGKIL 605
              C + Y E A K+L
Sbjct: 835 S--CGYNYDEVAWKVL 848



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 195/445 (43%), Gaps = 30/445 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  ++    K    + A R+L LM   G+      +S  +    + G++  A  +   
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           ++   V  N +I    I       K+  A   LERM      PN  TYN LI+G C   +
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
           +K+A  L+ +M   G  P  V+Y  ++G + K+        +   MV+            
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             + +  QG +EE  +++ +M++ G +PD+VTYT +++G+ R+G   +A   L+ M   G
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG 679

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMI------NTSE------------EEWWTPNAIT 411
           CKP+    +  +  L H  +  E R  I      NT E            E   T +   
Sbjct: 680 CKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSI 739

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y  ++ G  ++ +L EA  +V  M ++G  P+    N L+   C+ G    A + +   +
Sbjct: 740 YGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMV 799

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
             G    + ++  L+ G   +G  E+A ++   +  C  + D V +  +ID L K   V+
Sbjct: 800 ENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVD 859

Query: 532 EATELMMKMLSKGLVPTVVTYRTVI 556
           E +EL+  M  KG  P  +TY  +I
Sbjct: 860 ECSELIDIMEEKGCQPNPLTYSLLI 884



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 178/396 (44%), Gaps = 4/396 (1%)

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           SY +++  L + + +     +   M+       D   + E    +N   +    P +  Y
Sbjct: 103 SYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCY 162

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             ++    +   +D+ K +  ++ ++   PN  ++ A +NG C  G  +EA    +   +
Sbjct: 163 NTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQ 222

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               P+  TY+ ++ G  R   +  A +V   M +KG     V    LI  LC  G+++ 
Sbjct: 223 AGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINE 282

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A K   +     C   V  +T LI      G   EAL+L ++M     +P+  TYT +ID
Sbjct: 283 ALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLID 342

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--- 579
            L K  +++EA +++ +M  KGL+P+VVTY  +I  YC+ G ++D  ++L+ M S     
Sbjct: 343 GLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGP 402

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
             RT YN++I  LC    + +A  +L K+L         T + L+           AY++
Sbjct: 403 NTRT-YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
              M    L+PD        + L  EG+ EEA TL 
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF 497



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 150/346 (43%), Gaps = 5/346 (1%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y +++E L K K  + A  ++  M   G++     ++ L+    + G   +A+ V + M 
Sbjct: 547 YNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV 606

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
                P++      +H       L +    + +M   GI P+++TY  LI GY  L    
Sbjct: 607 SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTH 666

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
            A   +  M   GC P       ++  L  E R+KE R    ++  DS    +    E A
Sbjct: 667 RAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS---EIGIDS--VSNTLEYEIA 721

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
            +L  +M + GC  DV  Y A++ GFC+   L++A+ ++  M   G  P+   Y + L+ 
Sbjct: 722 LKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDC 781

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
            C  G   EA  +++   E    P   +Y +++ GL  EG   +A  V   ++  G+   
Sbjct: 782 CCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYD 841

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            V   +LI  L +   +D   + +     KGC  N + ++ LI G 
Sbjct: 842 EVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 122/303 (40%), Gaps = 41/303 (13%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y+ D   Y   L       + +    V+  M   GI      ++ L+  Y+R G    A 
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK------------------ALRFLERMQ 238
             L  M      P+L I +  I  L   N++ +                  AL+  E+M 
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMV 729

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G T +V  Y  LI G+C   R+++A  L+  M  +G SP +  Y +++   CK     
Sbjct: 730 EHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCK----- 784

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                              G   EA  LV+ M + G +P + +Y  +V G    G  ++A
Sbjct: 785 ------------------LGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKA 826

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
           K +   +   G   + V++   ++GL       E  E+I+  EE+   PN +TYS+++ G
Sbjct: 827 KAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEG 886

Query: 419 LRR 421
           L R
Sbjct: 887 LER 889


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 262/522 (50%), Gaps = 60/522 (11%)

Query: 115 LRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIEC 174
           +R  +   +A+QFF WA  Q  Y+HD   Y  +L+IL K+       +V + +   G  C
Sbjct: 1   MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSG--C 58

Query: 175 RPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
            P    F  L+    +AG+   A+  L  + + +VAP++ I N  IH L       +A++
Sbjct: 59  SPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVK 118

Query: 233 FLERMQLAGITPNVLTYNCLIKGYC---DLHR---------------------------- 261
             E M+ + + P++ TYN +I G C   +L +                            
Sbjct: 119 LFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINA 178

Query: 262 -------IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL- 313
                  +++A++++D M L G +PD ++Y +++  LC   R+ E  ++++ M    +L 
Sbjct: 179 GICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLV 238

Query: 314 --------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                   F   G +  A E++ +M +   +PDV+TYT +VNG CRVG++  A  +L+++
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 298

Query: 366 YHHGCKPNTVSYTAFLNGLCHNG---------KSLEAREMINTSEEEWWTPNAITYSVVM 416
              G  P+ ++YT+ ++GLC +G         K + ARE++         P   TY++V+
Sbjct: 299 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVL 358

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            GL ++G +S+A  ++ ++V +G+ P  V  N LI  LC+  ++  A     E  + GC 
Sbjct: 359 GGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCF 418

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            N V   S++ G C+ G +++A SL+ +M   +  P+ V YT++ID L K+ R+++A  +
Sbjct: 419 PNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVV 478

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           +  M  +G+      YR +I      GRV + + + ++M+++
Sbjct: 479 LDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVAR 520



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 198/420 (47%), Gaps = 27/420 (6%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY---LMVAYSRAGKL 192
           R   D   Y  ++  L K+   + A+ +L  M RRG +  P+  +Y   +     + G +
Sbjct: 127 RVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDV 186

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A+ +L  M+ A  AP+++  N+ IH L V  ++ +A   L+ M     +P+++T+N L
Sbjct: 187 EEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSC---SPDLVTFNTL 243

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           + G+C    +  A+++++EM  +   PD ++Y  ++  LC+  +++    L+E++V    
Sbjct: 244 LDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY 303

Query: 313 L------------FHDQGRIEEAKELVNQMS---------QMGCIPDVVTYTAVVNGFCR 351
           +                G IEEA +LV +MS          +  +P + TY  V+ G  +
Sbjct: 304 IPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIK 363

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            G + +A  ++  +   G  P+ V+Y   ++GLC   +  EA ++ +        PN +T
Sbjct: 364 DGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVT 423

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
              V+ GL R G++ +A  +V EM +K   P  V    LI  LC+  +MD A   +    
Sbjct: 424 LGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMR 483

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            +G A++   +  LI      G + EA+++ D+M      PD  T  T+ +A   N   E
Sbjct: 484 GQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 543



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 180/372 (48%), Gaps = 27/372 (7%)

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
           Q G   DV +Y  +++   + G   +  K+ + + H GC PN V++   + G C  G++ 
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAT 79

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
            A E +   +E    P+   ++ ++HGL ++G   +A  +   M      P     N +I
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVI 139

Query: 452 QSLCREGKMDGAKKFMQECLNKG--CAVNVVNFTSLIR-GFCQKGDLEEALSLLDDMYLC 508
             LC+ G ++ A++ ++E + +G   A ++V + +LI  G C+ GD+EEAL +LD M L 
Sbjct: 140 SGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLA 199

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD +TY +II AL   GRV EA E++  M      P +VT+ T++  +C+ G +   
Sbjct: 200 GPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGMLPRA 256

Query: 569 LKLLEKMLSKQKCR-------TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           L++LE+M     CR         Y  ++  LC  G ++ A  +L +++R     D     
Sbjct: 257 LEVLEEM-----CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYT 311

Query: 622 VLVESYLNKGIPLLAYKVACRMFNR---------NLIPDLKLCKKVSERLILEGKSEEAD 672
            LV+     G    A+K+   M  R         N++P L     V   LI +G   +A 
Sbjct: 312 SLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAV 371

Query: 673 TLMLRFVERGHI 684
           +L+   V RG++
Sbjct: 372 SLISDLVARGYV 383



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 146/291 (50%), Gaps = 8/291 (2%)

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
             E++ +  +  +Y+ ++  L + G       V ++++  G  P  V   +LI+  C+ G
Sbjct: 17  AGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAG 76

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           +   A +F++       A +V  F  LI G  + G+ ++A+ L ++M   + +PD  TY 
Sbjct: 77  QATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYN 136

Query: 519 TIIDALSKNGRVEEATELMMKMLSKG--LVPTVVTYRTVIHR-YCQVGRVEDLLKLLE-- 573
           T+I  L K+G +E+A EL+ +M+ +G    P +VTY T+I+   C+ G VE+ L++L+  
Sbjct: 137 TVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGM 196

Query: 574 KMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           K+         YN +I  LC  G + EA +IL  +   +   D  T + L++ +   G+ 
Sbjct: 197 KLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGML 253

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
             A +V   M   N++PD+     +   L   G+ + A  L+   V +G+I
Sbjct: 254 PRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYI 304


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 157/551 (28%), Positives = 267/551 (48%), Gaps = 31/551 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y    + Y  +L  LS   L   A+R    M   G+      ++ L+ A    G  + A+
Sbjct: 119 YAPSVLAYNAVLLALSDASL-PSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 177

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            VL  M+ A   PN +  NT +       ++ +A R ++ M+  G+ PN++T+N ++ G 
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGI 237

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RDLMEKM 307
           C   R++DA K+ DEM  +G +PD VSY T++G  CK     E          + +M  +
Sbjct: 238 CKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDV 297

Query: 308 VNDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           V  ++L H     G +E A  LV +M + G   + +T+TA+++GFC+ G LD A   +++
Sbjct: 298 VTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVRE 357

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M     +P+ V Y A +NG C  G+  EARE++   E +   P+ +TYS ++    + G 
Sbjct: 358 MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGD 417

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
              A  + ++M++ G  P  +  + LI+ LC E ++  A    +  ++ G   + V +TS
Sbjct: 418 THSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTS 477

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G C++G++E ALSL D+M      PD VTY+ +I+ LSK+ R +EA  L+ K+  + 
Sbjct: 478 LIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEE 537

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKI 604
            VP  + Y  ++ R C+   ++ +L LL                 +  C  G + EA K+
Sbjct: 538 PVPANIKYDALM-RCCRNAELKSVLALL-----------------KGFCMKGLMNEADKV 579

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
              +L      D S   VL+  +  +G  + A     +M      P+      +   L  
Sbjct: 580 YQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFE 639

Query: 665 EGKSEEADTLM 675
           +G   EAD ++
Sbjct: 640 KGMVVEADQVI 650



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 217/435 (49%), Gaps = 31/435 (7%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G  P+VL YN ++    D   +  A +  D M   G +P+  +Y  ++  LC        
Sbjct: 118 GYAPSVLAYNAVLLALSD-ASLPSARRFFDSMLSDGVAPNVYTYNILVRALC-------- 168

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                           +G  +EA  ++  M   GC P+ VTY  +V  FCR GE+D+A++
Sbjct: 169 ---------------GRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAER 213

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           ++  M   G KPN V++ + +NG+C  G+  +AR++ +   +E   P+ ++Y+ ++ G  
Sbjct: 214 LVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYC 273

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           + G   EA  V  EM +KG  P  V    LI  +C+ G ++ A   ++E   +G  +N +
Sbjct: 274 KVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEI 333

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            FT+LI GFC+KG L++AL  + +M  C+  P  V Y  +I+     GR++EA EL+ +M
Sbjct: 334 TFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM 393

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYL 598
            +KG+ P VVTY T++  YC+ G      +L ++ML       A  Y+ +I  LC    L
Sbjct: 394 EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRL 453

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
            +A  +   ++    + D  T   L++ +  +G    A  +   M    ++PD+     V
Sbjct: 454 GDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDV-----V 508

Query: 659 SERLILEGKSEEADT 673
           +  +++ G S+ A T
Sbjct: 509 TYSVLINGLSKSART 523



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 236/515 (45%), Gaps = 101/515 (19%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  VLR M  RG  C P A +Y  L+ A+ RAG++  A  ++ MM++  + PNL+  N+ 
Sbjct: 176 ALSVLRDM--RGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSV 233

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           ++ +    ++  A +  + M   G+ P+ ++YN L+ GYC +    +A+ +  EM  KG 
Sbjct: 234 VNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGI 293

Query: 278 SPDKVSYYTVMGYLCK----EKRIKEVRDLMEKMVNDSNL--------FHDQGRIEEAKE 325
            PD V++ +++  +CK    E+ +  VR++ E+ +  + +        F  +G +++A  
Sbjct: 294 MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALL 353

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
            V +M Q    P VV Y A++NG+C VG +D+A++++++M   G KP+ V+Y+  L+  C
Sbjct: 354 AVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYC 413

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMH---------------------GLR---- 420
            NG +  A ++     E    P+AITYS ++                      GL+    
Sbjct: 414 KNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEV 473

Query: 421 ----------REGKLSEACDVVREMVKKGFFPT--------------------------- 443
                     +EG +  A  +  EMVK G  P                            
Sbjct: 474 TYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKL 533

Query: 444 ----PVEINL-------------------LIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
               PV  N+                   L++  C +G M+ A K  Q  L++   ++  
Sbjct: 534 YHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGS 593

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            ++ LI G C++G++ +ALS    M  C   P++ +  ++I  L + G V EA +++ ++
Sbjct: 594 VYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           L+   +      + +I    + G V+ +L +L  M
Sbjct: 654 LNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGM 688



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 212/480 (44%), Gaps = 66/480 (13%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           R+   + + + +  ++  + K    + A++V   M + G+   P+  SY  L+  Y + G
Sbjct: 219 REGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLA--PDGVSYNTLVGGYCKVG 276

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG--------- 241
               A+ V + M +  + P+++   + IHV+     L +A+  +  M+  G         
Sbjct: 277 CSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFT 336

Query: 242 --------------------------ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
                                     I P+V+ YN LI GYC + R+ +A +L+ EM  K
Sbjct: 337 ALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAK 396

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEA 323
           G  PD V+Y T++   CK         L ++M+ +  L              ++ R+ +A
Sbjct: 397 GVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDA 456

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
             L   M  +G  PD VTYT++++G C+ G +++A  +  +M   G  P+ V+Y+  +NG
Sbjct: 457 HVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLING 516

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH---------------GLRREGKLSEA 428
           L  + ++ EA+ ++     E   P  I Y  +M                G   +G ++EA
Sbjct: 517 LSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEA 576

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             V + ++ + +       ++LI   CREG +  A  F ++ L  G A N  +  SLIRG
Sbjct: 577 DKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRG 636

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
             +KG + EA  ++  +  C    D      +ID   K G V+   +++  M   GL+P+
Sbjct: 637 LFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 171/358 (47%), Gaps = 10/358 (2%)

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  P V+ Y AV+        L  A++    M   G  PN  +Y   +  LC  G   EA
Sbjct: 118 GYAPSVLAYNAVLLALSD-ASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
             ++         PNA+TY+ ++    R G++  A  +V  M + G  P  V  N ++  
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           +C+ G+M+ A+K   E + +G A + V++ +L+ G+C+ G   EALS+  +M      PD
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VT+T++I  + K G +E A  L+ +M  +GL    +T+  +I  +C+ G ++D L  + 
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 574 KMLSKQKCR-----TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           +M   ++CR       YN +I   C  G ++EA +++ ++     K D  T   ++ +Y 
Sbjct: 357 EM---RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYC 413

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
             G    A+++  +M    ++PD      +   L  E +  +A  L    +  G +QP
Sbjct: 414 KNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG-LQP 470



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 147/339 (43%), Gaps = 27/339 (7%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           RQ R +   + Y  ++           A+ ++R M  +G++     +S ++ AY + G  
Sbjct: 359 RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDT 418

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            +A  +   M +  V P+ +  ++ I VL    +L  A    + M   G+ P+ +TY  L
Sbjct: 419 HSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSL 478

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-- 310
           I G+C    ++ A+ L DEM   G  PD V+Y  ++  L K  R KE + L+ K+ ++  
Sbjct: 479 IDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEP 538

Query: 311 --SNLFHD-----------------------QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
             +N+ +D                       +G + EA ++   +       D   Y+ +
Sbjct: 539 VPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVL 598

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G CR G + +A    +QM   G  PN+ S  + + GL   G  +EA ++I        
Sbjct: 599 IHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCS 658

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             +A     ++    +EG +    DV+  M + G  P+P
Sbjct: 659 LADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPSP 697


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 164/543 (30%), Positives = 265/543 (48%), Gaps = 32/543 (5%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y  +L  LS   L   A+R L  M R G+      ++ L+ A    G+L  A+ V+  M+
Sbjct: 121 YNAVLLALSDASL-PSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR 179

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG-ITPNVLTYNCLIKGYCDLHRI 262
            A  APN +  NT +       +L  A R +  M+  G   PN++T+N ++ G C   R+
Sbjct: 180 GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRM 239

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSNL 313
           + A K+ DEM  +G +PD VSY T++   CK   + E          R L+  +V  ++L
Sbjct: 240 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 299

Query: 314 FH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            H     G +E+A  LV QM + G   + VT+TA+++GFC+ G LD A   +++M   G 
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P+ V Y A +NG C  G+   ARE+I   E +   P+ +TYS ++ G  + G L  A  
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           + ++M+KKG  P  +  + LI+ LC E +++ A +  +  L  G   +   +T+LI G C
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           ++G++E+ALSL D+M      PD VTY+ +I+ LSK+ R +EA  L+ K+  +  VP  +
Sbjct: 480 KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNI 539

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
            Y  ++   C     + ++ LL                 +  C  G ++EA K+   +L 
Sbjct: 540 KYDALM-LCCSKAEFKSVVALL-----------------KGFCMKGLMKEADKVYQSMLD 581

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
              K D S   +L+  +   G    A     +M      P+      +   L  EG   E
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 641

Query: 671 ADT 673
           AD 
Sbjct: 642 ADN 644



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 223/473 (47%), Gaps = 65/473 (13%)

Query: 170 RGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVA-PNLLICNTAIHVLVVGNK 226
           RG  C P A +Y  L+ A+ RAG+L  A  V+S+M++   A PNL+  N+ ++ L    +
Sbjct: 179 RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +  A +  + M   G+ P+V++YN L+ GYC +  + +++ +  EM  +G  PD V++ +
Sbjct: 239 MEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTS 298

Query: 287 VMGYLCKEKRIKEVRDLMEKM------VNDSNL------FHDQGRIEEAKELVNQMSQMG 334
           ++   CK   +++   L+ +M      +N+         F  +G +++A   V +M + G
Sbjct: 299 LIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 358

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P VV Y A++NG+C++G +D A++++++M     KP+ V+Y+  ++G C  G    A 
Sbjct: 359 IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAF 418

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           ++     ++   P+AITYS ++ GL  E +L++AC++   M++ G  P       LI   
Sbjct: 419 QLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 478

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFT------------------------------- 483
           C+EG ++ A     E + KG   +VV ++                               
Sbjct: 479 CKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 538

Query: 484 -------------------SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
                              +L++GFC KG ++EA  +   M       D   Y+ +I   
Sbjct: 539 IKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGH 598

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
            + G V +A     +ML  G  P   +  +++    + G V +    ++ +L+
Sbjct: 599 CRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLT 651



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 206/471 (43%), Gaps = 66/471 (14%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + +  M+  L K    +GA++V   M R G+   P+  SY  L+  Y + G L  ++ V 
Sbjct: 224 VTFNSMVNGLCKAGRMEGARKVFDEMVREGLA--PDVVSYNTLLSGYCKVGCLHESLAVF 281

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL------------------------- 234
           S M +  + P+++   + IH       L +A+  +                         
Sbjct: 282 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 341

Query: 235 ----------ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
                     E M+  GI P+V+ YN LI GYC L R+  A +LI EM  K   PD V+Y
Sbjct: 342 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 401

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQ 332
            T++   CK   +     L +KM+    L              ++ R+ +A EL   M Q
Sbjct: 402 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           +G  PD  TYT +++G C+ G +++A  +  +M   G  P+ V+Y+  +NGL  + ++ E
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521

Query: 393 AREMINTSEEEWWTPNAITYSVVM---------------HGLRREGKLSEACDVVREMVK 437
           A  ++     E   P+ I Y  +M                G   +G + EA  V + M+ 
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 581

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           + +       ++LI   CR G +  A  F ++ L  G + N  +  SL+RG  ++G + E
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 641

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           A + + D+  C    D      +ID   K G V+   +++  M   GL+P+
Sbjct: 642 ADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 4/212 (1%)

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G A +V  + +++        L  A   L  M      P+  TY  ++ AL   GR+EEA
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIE 590
             ++  M   G  P  VTY T++  +C+ G ++   +++  M  +   +     +N ++ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC  G +E A K+  +++R     D  + + L+  Y   G    +  V   M  R L+P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           D+     +       G  E+A  L+ +  ERG
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 258/514 (50%), Gaps = 34/514 (6%)

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           R+LR+  R  +      F   + + ++  +    + + + M    V  N+   N  I+ L
Sbjct: 82  RMLRMNPRPSVV----EFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCL 137

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
              N +  A+  L +M   GI P+ +T+N LI G C    IK+A+ L +EM  +G  PD 
Sbjct: 138 CRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDV 197

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
           +SY TV+  LCK                        G    A +L+ +M + GC P++V 
Sbjct: 198 ISYSTVINGLCK-----------------------SGNTSMALQLLRKMEEKGCKPNLVA 234

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           YT +++  C+   ++ A  +L +M   G  P+ V+Y+  L+G C  G   EA  + N   
Sbjct: 235 YTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMV 294

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                PN +T+++++ GL +EG +SEA  V   M KKG  P     N L+   C   +MD
Sbjct: 295 GRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMD 354

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A+K +   ++KGCA  V ++  LI G+C++  L+EA SLL +M   +  PDTVTY+T++
Sbjct: 355 EAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLM 414

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--Q 579
             L + GR +EA  L  +M S GL+P ++TY T++   C+ G +++ LKLL+ M     +
Sbjct: 415 QGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIE 474

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                YN +IE +   G LE A ++  K+     +    T  ++++  L +G+   AY++
Sbjct: 475 PDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYEL 534

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             +M +   +P+       S  +I++G  +  D+
Sbjct: 535 FRKMEDDGFLPN-----SCSYNVIIQGFLQNQDS 563



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 231/455 (50%), Gaps = 26/455 (5%)

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
           +M L G+T NV + N LI   C L+ +  AI ++ +M   G  PD +++ T++   C E 
Sbjct: 117 QMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIE- 175

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                                 G I+EA  L N+M + G  PDV++Y+ V+NG C+ G  
Sbjct: 176 ----------------------GEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNT 213

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
             A ++L++M   GCKPN V+YT  ++ LC +    +A ++++   +    P+ +TYS +
Sbjct: 214 SMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTI 273

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +HG    G L+EA  +  EMV +   P  V   +L+  LC+EG +  A+   +    KG 
Sbjct: 274 LHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGA 333

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             N   + +L+ G+C    ++EA  +LD M      P   +Y  +I+   K  R++EA  
Sbjct: 334 EPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKS 393

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLC 593
           L+++M  K L P  VTY T++   CQVGR ++ L L ++M S         Y+ +++ LC
Sbjct: 394 LLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLC 453

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
             G+L+EA K+L  +  +  + D    ++L+E     G   +A ++  ++F   + P ++
Sbjct: 454 KHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIR 513

Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
               + + L+ EG S+EA  L  +  + G + P S
Sbjct: 514 TYTIMIKGLLKEGLSDEAYELFRKMEDDGFL-PNS 547



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 211/432 (48%), Gaps = 12/432 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  M + GI+     F+ L+      G+++ A+ + + M +    P+++  +T I+
Sbjct: 146 AISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVIN 205

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L      + AL+ L +M+  G  PN++ Y  +I   C    + DA+ L+ EM  +G  P
Sbjct: 206 GLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPP 265

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKELV 327
           D V+Y T++   C    + E   L  +MV  + + +             +G + EA+ + 
Sbjct: 266 DVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVF 325

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
             M++ G  P+  TY A+++G+C   ++D+A+K+L  M   GC P   SY   +NG C  
Sbjct: 326 EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR 385

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            +  EA+ ++    E+  TP+ +TYS +M GL + G+  EA ++ +EM   G  P  +  
Sbjct: 386 RRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTY 445

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           + L+  LC+ G +D A K ++         ++V +  LI G    G LE A  L   ++ 
Sbjct: 446 STLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFA 505

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P   TYT +I  L K G  +EA EL  KM   G +P   +Y  +I  + Q      
Sbjct: 506 DGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSST 565

Query: 568 LLKLLEKMLSKQ 579
            ++L+++M+ K+
Sbjct: 566 AIRLIDEMVGKR 577



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 188/386 (48%), Gaps = 23/386 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++ L K  L   A  +L  M  RGI      +S ++  +   G L  A  + + 
Sbjct: 233 VAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNE 292

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    V PN +     +  L     +++A    E M   G  PN  TYN L+ GYC  ++
Sbjct: 293 MVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQ 352

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A K++D M  KGC+P   SY  ++   CK +R+                       +
Sbjct: 353 MDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRL-----------------------D 389

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EAK L+ +MS+    PD VTY+ ++ G C+VG   +A  + ++M   G  P+ ++Y+  L
Sbjct: 390 EAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLL 449

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +GLC +G   EA +++ + +E    P+ + Y++++ G+   GKL  A ++  ++   G  
Sbjct: 450 DGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQ 509

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           PT     ++I+ L +EG  D A +  ++  + G   N  ++  +I+GF Q  D   A+ L
Sbjct: 510 PTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRL 569

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKN 527
           +D+M   +   D+ T+  ++D  S++
Sbjct: 570 IDEMVGKRFSADSSTFQMLLDLESRD 595



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 137/276 (49%), Gaps = 2/276 (0%)

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            +D A     +M     +P+ V +  FL  +    +      + N  +    T N  + +
Sbjct: 72  SIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 131

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           ++++ L R   +  A  V+ +M K G  P  +  N LI   C EG++  A     E + +
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR 191

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   +V++++++I G C+ G+   AL LL  M      P+ V YTTIID+L K+  V +A
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIEN 591
            +L+ +M+ +G+ P VVTY T++H +C +G + +   L  +M+ +        +  +++ 
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           LC  G + EA  +   + +  ++ +A T + L++ Y
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGY 347


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 229/473 (48%), Gaps = 27/473 (5%)

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
           A  RAG    AM ++  M    + P ++  N+ +  L       KA    + M   G+ P
Sbjct: 200 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 259

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           +V ++  LI G+C +  I++A+K+  EM  +G  PD VS+  ++G               
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIG--------------- 304

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                   LF  +G+++ A   + +M   G +PD V YT V+ GFCR G +  A ++  +
Sbjct: 305 --------LFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDE 356

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   GC P+ V+Y   LNGLC   + L+A  ++N   E    P+  T++ ++HG   EGK
Sbjct: 357 MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 416

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L +A  +   M+ +   P  V  N LI  +CR+G +D A     +  ++    N V ++ 
Sbjct: 417 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 476

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI   C+KG +E+A   LD+M      P+ +TY +II    ++G V +  + + KM+   
Sbjct: 477 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEA 601
           + P ++TY T+IH Y +  ++ D  KLL  M+ K+K +     YN +I      G ++EA
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLL-NMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 595

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
           G I  K+     + D  T   ++  ++  G    A+++   M  R   PD K 
Sbjct: 596 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDKF 648



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 230/437 (52%), Gaps = 23/437 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +L+ L ++ +   A  V + M   G+     +F+ L+  + R G++  A+ +   
Sbjct: 227 VTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKE 286

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+   + P+L+  +  I +     K+  A+ +L  M+  G+ P+ + Y  +I G+C    
Sbjct: 287 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 346

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + DA+++ DEM   GC PD V+Y T++  LCKE+R+ +                      
Sbjct: 347 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD---------------------- 384

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A+ L+N+M + G  PD+ T+T +++G+C  G+LD+A ++   M +   +P+ V+Y   +
Sbjct: 385 -AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 443

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G+C  G   +A ++ +        PN +TYS+++     +G++ +A   + EM+ KG  
Sbjct: 444 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 503

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  +  N +I+  CR G +   +KF+Q+ +    + +++ + +LI G+ ++  + +A  L
Sbjct: 504 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 563

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L+ M   K  PD VTY  +I+  S +G V+EA  +  KM +KG+ P   TY ++I+ +  
Sbjct: 564 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 623

Query: 562 VGRVEDLLKLLEKMLSK 578
            G  ++  +L ++ML +
Sbjct: 624 AGNSKEAFQLHDEMLQR 640



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 259/548 (47%), Gaps = 26/548 (4%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           P V+ +++   ++++  + A    RL+    +     A + L+ A SRAG    A     
Sbjct: 86  PRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYR 145

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           ++  +    N    N  +H      +  K    +  M+   + P+V+T+N ++       
Sbjct: 146 LVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAG 205

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
             + A+ L+D M  KG  P  V+Y +V+  LC+                        G  
Sbjct: 206 DAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCR-----------------------SGMW 242

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           ++A E+  +M   G  PDV ++T ++ GFCRVGE+++A K+ ++M H G KP+ VS++  
Sbjct: 243 DKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL 302

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           +      GK   A   +         P+ + Y++V+ G  R G +S+A  V  EMV  G 
Sbjct: 303 IGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGC 362

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  V  N L+  LC+E ++  A+  + E   +G   ++  FT+LI G+C +G L++AL 
Sbjct: 363 LPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 422

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L D M   +  PD VTY T+ID + + G +++A +L   M S+ + P  VTY  +I  +C
Sbjct: 423 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 482

Query: 561 QVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           + G+VED    L++M++K        YN +I+  C  G + +  K L K++      D  
Sbjct: 483 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 542

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           T + L+  Y+ +     A+K+   M    + PD+     +     + G  +EA  +  + 
Sbjct: 543 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 602

Query: 679 VERGHIQP 686
             +G I+P
Sbjct: 603 CAKG-IEP 609



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 190/409 (46%), Gaps = 41/409 (10%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQI---CAV----LRSQADERVALQFFY 129
           L+   CR+ E+  A   K+  E+R+  R +KP  +   C +     R + D  +A   + 
Sbjct: 267 LIGGFCRVGEIEEAL--KIYKEMRH--RGIKPDLVSFSCLIGLFARRGKMDHAMA---YL 319

Query: 130 WADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYS 187
              R +    D ++Y M++    +  L   A RV   M   G  C P+  +Y  L+    
Sbjct: 320 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV--GCGCLPDVVTYNTLLNGLC 377

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           +  +L +A  +L+ M++  V P+L    T IH   +  KL KAL+  + M    + P+++
Sbjct: 378 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 437

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN LI G C    +  A  L D+M  +   P+ V+Y  ++   C               
Sbjct: 438 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC--------------- 482

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                   ++G++E+A   +++M   G +P+++TY +++ G+CR G + + +K LQ+M  
Sbjct: 483 --------EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV 534

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +   P+ ++Y   ++G     K  +A +++N  E+E   P+ +TY+++++G    G + E
Sbjct: 535 NKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 594

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
           A  +  +M  KG  P       +I      G    A +   E L +G A
Sbjct: 595 AGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFA 643



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 142/303 (46%), Gaps = 23/303 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +L  L K +    A+ +L  M  RG+      F+ L+  Y   GKL  A+ + 
Sbjct: 365 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 424

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    + P+++  NT I  +     L KA    + M    I PN +TY+ LI  +C+ 
Sbjct: 425 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 484

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            +++DA   +DEM  KG  P+ ++Y +++   C+   + + +  ++KM            
Sbjct: 485 GQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM------------ 532

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                 +VN++S     PD++TY  +++G+ +  ++  A K+L  M     +P+ V+Y  
Sbjct: 533 ------MVNKVS-----PDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 581

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +NG   +G   EA  +      +   P+  TY  +++G    G   EA  +  EM+++G
Sbjct: 582 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 641

Query: 440 FFP 442
           F P
Sbjct: 642 FAP 644


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/556 (27%), Positives = 262/556 (47%), Gaps = 25/556 (4%)

Query: 143 VYYMMLEIL---SKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           VY  +L +L   SK KL + A      M+ +GIE     F+ ++ A  RA + R A+ +L
Sbjct: 163 VYNHLLTVLAEGSKIKLLESAYTE---MSSQGIEPDVVTFNTVIDALCRARQARTAVLML 219

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    VAP+     T +   V    +  ALR   RM   G +P  +T N LI GYC L
Sbjct: 220 EEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKL 279

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R+ DA+  I +    G  PD+V++ T +  LC+   +     ++  M+ +         
Sbjct: 280 GRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTY 339

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               N   + G +EEAK +VNQM   GC+PD  T+  ++   C   +L++A  + +++  
Sbjct: 340 STVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTV 399

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN  ++   +N LC  G    A  +    +    TP+ +TY++++  L   GKL++
Sbjct: 400 KGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAK 459

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A D+++EM   G   + V  N +I  LC+  +++ A++   +    G   N + F +LI 
Sbjct: 460 ALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLID 519

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C    +++A  L+D M      P+ VTY +I+    K G + +A +++  M + G   
Sbjct: 520 GLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEV 579

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            VVTY T+I+  C+  R +  LKLL  M  K  +    AYN VI++L       +A  + 
Sbjct: 580 DVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLF 639

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLL-AYKVACRMFNRNLIPDLKLCKKVSERLIL 664
            ++       DA T  ++       G P+  A+     M +   IP+    + ++E L+ 
Sbjct: 640 REMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLN 699

Query: 665 EGKSEEADTLMLRFVE 680
            G     D  ++R +E
Sbjct: 700 LGM----DDYLIRAIE 711



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 239/514 (46%), Gaps = 25/514 (4%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G++   E +++L+   +   K++      + M    + P+++  NT I  L    +   A
Sbjct: 156 GVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTA 215

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           +  LE M    + P+  T+  L++G+ +   I+ A++L   M   GCSP  V+   ++  
Sbjct: 216 VLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLING 275

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            CK  R+ +    +++ + D                       G  PD VT++  VNG C
Sbjct: 276 YCKLGRVGDALGYIQQEIAD-----------------------GFEPDRVTFSTFVNGLC 312

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           + G +D A K+L  M   GC+P+  +Y+  +N LC+NG+  EA+ ++N   +    P+  
Sbjct: 313 QNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTT 372

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           T++ ++  L  E +L EA D+ RE+  KG  P     N+LI +LC+ G    A +  +E 
Sbjct: 373 TFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEM 432

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
            + GC  + V +  LI   C  G L +AL LL +M +      TVTY TIID L K  R+
Sbjct: 433 KSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRI 492

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQV 588
           EEA E+  +M   G+    +T+ T+I   C   R++D  +L+++M+S+  Q     YN +
Sbjct: 493 EEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSI 552

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           + + C  G + +A  IL  +     + D  T   L+           A K+   M  + +
Sbjct: 553 LTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGM 612

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            P  K    V + L       +A +L     E G
Sbjct: 613 KPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVG 646



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 151/315 (47%), Gaps = 3/315 (0%)

Query: 320 IEEAKELV-NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
            ++A +LV NQ+   G   +   Y  ++       ++   +    +M   G +P+ V++ 
Sbjct: 141 FDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFN 200

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++ LC   ++  A  M+         P+  T++ +M G   EG +  A  +   M + 
Sbjct: 201 TVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEM 260

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  PT V +N+LI   C+ G++  A  ++Q+ +  G   + V F++ + G CQ G ++ A
Sbjct: 261 GCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHA 320

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L +L  M     +PD  TY+T+I+ L  NG +EEA  ++ +M+  G +P   T+ T+I  
Sbjct: 321 LKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVA 380

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            C   ++E+ L L  ++  K      Y  N +I  LC  G    A ++  ++  +    D
Sbjct: 381 LCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPD 440

Query: 617 ASTCHVLVESYLNKG 631
             T ++L+++  + G
Sbjct: 441 EVTYNILIDNLCSSG 455


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 158/568 (27%), Positives = 270/568 (47%), Gaps = 23/568 (4%)

Query: 135 WRYRHDPIVYYMMLEILSKTKLCQGAKRVL-RLMARRGIECRPEAFSY--LMVAYSRAGK 191
           WR  +D +++  +L+ L   K    A  +L R M   G  C P+ FSY  L+  +    +
Sbjct: 123 WRV-NDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFG--CTPDVFSYSILLKGFCNEKR 179

Query: 192 LRNAMYVLSMMQK---AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
              A+ +LSMM      +  PN++   T I  L     + +A    + M   G+ PN  T
Sbjct: 180 AEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHT 239

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           Y CLI GY  + + K+ ++++ EM   G  PD   Y  ++ YLCK  R  E R++ + ++
Sbjct: 240 YTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVI 299

Query: 309 NDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                          + +  +G + E    ++ M   G  PD   +  +   + +   +D
Sbjct: 300 RKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMID 359

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A  +  +M      PN V+Y A ++ LC  G+  +A    N   +E  TP+   +S ++
Sbjct: 360 EAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLV 419

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
           +GL    K  +A ++  E++ +G     V  N L+ +LCREG++  A++ +   L  G  
Sbjct: 420 YGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVR 479

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            +V+++ +L+ G C  G ++EA  LLD +      PD VTY T++    K  R+++A  L
Sbjct: 480 PDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSL 539

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCS 594
             +ML KGL P VVTY T++H   Q GR  +  +L   M++   Q     YN +I  LC 
Sbjct: 540 FREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCK 599

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
             +++EA K+   +     + D  T ++++ + L  G    A  +   +    L+PD++ 
Sbjct: 600 NNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVET 659

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERG 682
              ++E LI EG  EE D L     E G
Sbjct: 660 YCLIAENLIKEGSLEELDELFSAMEENG 687



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/480 (23%), Positives = 202/480 (42%), Gaps = 48/480 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  +Y ++L+ L K   C  A+ +   + R+GI+     +  L+  Y+  G L      L
Sbjct: 271 DCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M    V+P+  I N           + +A+   ++M+   ++PN++TY  LI   C L
Sbjct: 331 DLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKL 390

Query: 260 HRIKDAIKLIDEMPLKGCSPD-----------------------------------KVSY 284
            R+ DA+   ++M  +G +PD                                    V +
Sbjct: 391 GRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFF 450

Query: 285 YTVMGYLCKEKRIKEVRDLMEKM--------VNDSNLFHD----QGRIEEAKELVNQMSQ 332
            T+M  LC+E R+ E + L++ M        V   N   D     GRI+EA +L++ +  
Sbjct: 451 NTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVS 510

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           +G  PD VTY  +++G+C+   +D A  + ++M   G  P+ V+Y   L+GL   G+  E
Sbjct: 511 IGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSE 570

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A+E+  +        N  TY+++++GL +   + EA  +   +  K         N++I 
Sbjct: 571 AKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIG 630

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           +L + G+ + A          G   +V  +  +     ++G LEE   L   M      P
Sbjct: 631 ALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAP 690

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           ++     ++  L   G +  A   + K+  K       T   +I  Y + G  + L K L
Sbjct: 691 NSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSR-GEYQQLAKSL 749



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 164/375 (43%), Gaps = 26/375 (6%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           RQ R   + + Y  +++ L K      A      M   G+      FS L+       K 
Sbjct: 369 RQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKW 428

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A  +   +    +  + +  NT +  L    ++ +A R ++ M   G+ P+V++YN L
Sbjct: 429 EKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTL 488

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           + G+C   RI +A KL+D +   G  PDKV+Y T++   CK +                 
Sbjct: 489 VDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKAR----------------- 531

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                 RI++A  L  +M   G  PDVVTY  +++G  + G   +AK++   M +   + 
Sbjct: 532 ------RIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQM 585

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N  +Y   +NGLC N    EA +M ++   +    +  T ++++  L + G+  +A D+ 
Sbjct: 586 NIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLF 645

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             +   G  P      L+ ++L +EG ++   +        G A N     +L+R    +
Sbjct: 646 ATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHR 705

Query: 493 GDLEEA---LSLLDD 504
           GD+  A   LS LD+
Sbjct: 706 GDINRAGAYLSKLDE 720



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 119/277 (42%), Gaps = 16/277 (5%)

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK---GCAVNVV- 480
           L++A  +  EM+      +    N L+ ++ R  +   A + +    N+    C++ V  
Sbjct: 32  LNDALKLFDEMLTHARPASVRAFNQLLTAVSR-ARCSSASELVVSLFNRMIRECSIKVAP 90

Query: 481 ---NFTSLIRGFCQKGDLEEALSLLDDMYLCK-KDPDTVTYTTIIDALSKNGRVEEATEL 536
               +T LI  FC+ G L+   +    +     +  DTV ++ ++  L    RV+EAT++
Sbjct: 91  SSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDI 150

Query: 537 MMKMLSK-GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML-----SKQKCRTAYNQVIE 590
           +++ + + G  P V +Y  ++  +C   R E+ L+LL  M      S       Y  VI+
Sbjct: 151 LLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVID 210

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC    ++ A  +   ++    + +  T   L+  YL+ G      ++   M    L P
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQP 270

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
           D  +   + + L   G+  EA  +    + +G I+P 
Sbjct: 271 DCYIYAVLLDYLCKNGRCTEARNIFDSVIRKG-IKPN 306


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 246/500 (49%), Gaps = 27/500 (5%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+++SY  L+   ++AGKL +A  +   +  + V P+ +   + IH L + N    A   
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
              M   G  P+ +TYN +I   C    +++A  LI +M   G  PD V+Y TVM  LCK
Sbjct: 68  FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 294 EKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
             R+                       EEA  L N+M ++GC P+  ++  ++ G C+  
Sbjct: 128 SSRV-----------------------EEALLLFNEMERLGCTPNRRSHNTIILGLCQQS 164

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           ++DQA ++  +M      P++ SY   ++GL   GK  EA ++     +   TP+A+TY+
Sbjct: 165 KIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYN 224

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           VV+HG+     L EA ++ + M  KG  P+    N+LI + C+ GK+D A + ++   + 
Sbjct: 225 VVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDD 284

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   +VV +++LI G C    +++A  LL+DM   +  P  VT  T+I  L K GR++EA
Sbjct: 285 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIEN 591
            E++  M+S G  P VVTY T++H +C+ G+ E   +LL  M+++        Y  ++  
Sbjct: 345 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 404

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC    L EA  +  ++  +    +  T   L+  + + G      K+   M    + PD
Sbjct: 405 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464

Query: 652 LKLCKKVSERLILEGKSEEA 671
             +   ++  L   G+S  A
Sbjct: 465 HVVYGTLAAELCKSGRSARA 484



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 261/553 (47%), Gaps = 18/553 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++ L+K      A+ + + +   G+     A++ L+     A    +A  + 
Sbjct: 9   DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M +    P+ +  N  I        L +A   +++M   G  P+V+TYN ++ G C  
Sbjct: 69  ADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDS--- 311
            R+++A+ L +EM   GC+P++ S+ T++  LC++ +I +   +  +M       DS   
Sbjct: 129 SRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSY 188

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               +     G++ EA +L  +M   G  P  VTY  V++G C    LD+A ++ + M  
Sbjct: 189 GILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRS 248

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC+P+  ++   ++  C  GK  EA  ++    ++   P+ +TYS ++ GL    ++ +
Sbjct: 249 KGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 308

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++ +MVK+   PT V  N LI  LC+ G++  A++ +   ++ G + +VV + +L+ 
Sbjct: 309 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 368

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C+ G  E A  LL DM      P+ VTYT ++  L K  R+ EA  +  +M S G  P
Sbjct: 369 GHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            + TY  +I  +C  G+V+  LKL  +M+          Y  +   LC  G    A +IL
Sbjct: 429 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488

Query: 606 --GK-VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
             G+  LR+ +  D       V+  L  G   +A      M     +P  + C  +   L
Sbjct: 489 REGRESLRSEAWGD-EVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 547

Query: 663 ILEGKSEEADTLM 675
              G+  EA  ++
Sbjct: 548 CKSGQGGEARAVL 560



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 238/503 (47%), Gaps = 40/503 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K+   + A  +   M R G      + + +++   +  K+  A  V 
Sbjct: 114 DVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF 173

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+   + P+       I  L    KL +A +  +RM  +GITP+ +TYN +I G C  
Sbjct: 174 HEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLA 233

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           + + +A++L   M  KGC P + ++  ++   CK                       +G+
Sbjct: 234 YTLDEALELFKSMRSKGCRPSRFTFNILIDAHCK-----------------------RGK 270

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++EA  L+ +M+  G +PDVVTY+ +++G C +  +D A+ +L+ M    CKP  V+   
Sbjct: 271 LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++GLC  G+  EARE+++       +P+ +TY+ ++HG  R G+   A +++ +MV +G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  V    L+  LC+  ++  A     +  + GCA N+  +T+LI GFC  G ++  L
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK----MLSKGLVPTVVTYRTV 555
            L  +M      PD V Y T+   L K+GR   A E++ +    + S+     V  YR  
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFA 508

Query: 556 IHRYCQVGRVEDLLKLLEKML------SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           +    + G++E  L  +  M+      + ++C +    ++  LC  G   EA  +L +++
Sbjct: 509 VDGLLEAGKMEMALGFVRDMVRGGQLPAPERCAS----LVAGLCKSGQGGEARAVLEEIM 564

Query: 610 RTASKADA-STCHVLVESYLNKG 631
             A    A       VE  + KG
Sbjct: 565 DLAYGGKARGKAAKFVEEMVGKG 587


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 148/495 (29%), Positives = 248/495 (50%), Gaps = 47/495 (9%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  DP  + ++L       LC  +  +LR + + GI   PEA + ++   SR   L  A+
Sbjct: 203 FSSDPASFDLLL-------LCLPSAPLLRRVRQYGISPSPEACNAVL---SRL-PLDEAI 251

Query: 197 YVLSMMQKAAVAPNLLIC--NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
            +   +      P+  +C  N  + VL    ++  A +  + M      P+V+TY  LI 
Sbjct: 252 ELFQGL------PDKNVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIH 302

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           GYC L  +++A+KL+D+M  +G  P+   Y +V+  LC                      
Sbjct: 303 GYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLC---------------------- 340

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
            D+GR+ +A  +V  M     I D   YT V++GFC  G+L  A++   +M   G   + 
Sbjct: 341 -DKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDG 399

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+YT  +NGLC  G+  EA +++          + +TY+V++ G  + GK++EA  V   
Sbjct: 400 VTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNT 459

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MV++G  P  V    L   LC++G +  A + + E  NKG  +N   + SLI G C+ G 
Sbjct: 460 MVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY 519

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           L++A+  + DM      PD  TYTT+IDAL K+G ++ A +L+ +ML  G+ PT+VTY  
Sbjct: 520 LDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNV 579

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +++ +C  GRVE   KLLE ML K      T YN +++  C    ++   +I   +    
Sbjct: 580 LMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRN 639

Query: 613 SKADASTCHVLVESY 627
            + + +T ++L++ +
Sbjct: 640 VEPNENTYNILIKGH 654



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/530 (24%), Positives = 243/530 (45%), Gaps = 47/530 (8%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSM 201
           Y ++L++L      + A+++   MA       P+  +Y  L+  Y   G+L NA+ +L  
Sbjct: 265 YNILLKVLCGAGRVEDARQLFDEMA-----SPPDVVTYGILIHGYCALGELENAVKLLDD 319

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    V PN  +  + + +L    +++ AL  +E M    +  +   Y  ++ G+C+   
Sbjct: 320 MVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGD 379

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +  A +  DEM  KG + D V+Y T++  LC+   +KE   ++++M+             
Sbjct: 380 LVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEML------------- 426

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A+ L           D VTYT +V+G+C+ G++ +A ++   M   G  PN V+YTA  
Sbjct: 427 -ARRL---------DVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALS 476

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +GLC  G    A E+++    +    NA TY+ +++GL + G L +A   + +M   G  
Sbjct: 477 DGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLK 536

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P       LI +LC+ G++D A   +QE L+ G    +V +  L+ GFC  G +E    L
Sbjct: 537 PDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKL 596

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L+ M      P+  TY +++        ++  TE+   M S+ + P   TY  +I  +C+
Sbjct: 597 LEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCK 656

Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
              +++      +M+ K  +   ++Y+ +I  L       EA K+   + +    A+   
Sbjct: 657 ARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDV 716

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
            +  ++   N+                NL   L LC ++ E  I++ K+E
Sbjct: 717 YNFYIDFNFNED---------------NLEATLALCDELVEASIVKSKAE 751



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 175/357 (49%), Gaps = 8/357 (2%)

Query: 336 IPD--VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           +PD  V +Y  ++   C  G ++ A+++  +M      P+ V+Y   ++G C  G+   A
Sbjct: 257 LPDKNVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENA 313

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            ++++        PNA  Y+ V+  L  +G++S+A  VV +MV             ++  
Sbjct: 314 VKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSG 373

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C +G +  A+++  E   KG A + V +T+LI G C+ G+L+EA  +L +M   + D D
Sbjct: 374 FCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVD 433

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VTYT ++D   K G++ EA ++   M+ +G+ P VVTY  +    C+ G V+   +LL 
Sbjct: 434 EVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLH 493

Query: 574 KMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +M +K     A  YN +I  LC  GYL++A + +  +     K D  T   L+++    G
Sbjct: 494 EMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSG 553

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
               A+ +   M +  + P +     +     + G+ E    L+   +E+ +I P +
Sbjct: 554 ELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEK-NIHPNA 609



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 148/368 (40%), Gaps = 49/368 (13%)

Query: 130 WADRQWR--YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS 187
           W D   R     D + Y  ++  L +    + A++VL+ M  R ++     ++ L+  Y 
Sbjct: 386 WFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYC 445

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           + GK+  A  V + M +  VAPN++        L     +  A   L  M   G+  N  
Sbjct: 446 KRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNAC 505

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN LI G C    +  A++ + +M   G  PD  +Y T++  LCK   +    DL+++M
Sbjct: 506 TYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEM 565

Query: 308 VNDS------------NLFHDQGRIEEAKELV---------------NQMSQMGCI---- 336
           +++             N F   GR+E  K+L+               N + +  CI    
Sbjct: 566 LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNM 625

Query: 337 ----------------PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
                           P+  TY  ++ G C+   + +A+    +M   G +    SY+A 
Sbjct: 626 KSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSAL 685

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           +  L    K +EAR++ +   +E +T     Y+  +     E  L     +  E+V+   
Sbjct: 686 IRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASI 745

Query: 441 FPTPVEIN 448
             +  E++
Sbjct: 746 VKSKAEMD 753


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 177/651 (27%), Positives = 287/651 (44%), Gaps = 81/651 (12%)

Query: 74  RHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADR 133
           R P    V R+  + S    K   EL+ L   LK   +  ++    D    +QFFYW  +
Sbjct: 41  REPFQAIVSRVCAILSRVQWKGSSELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISK 100

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE---------------- 177
           +  Y+H+   +  ML  L + ++   A  +  LM +    CR E                
Sbjct: 101 RPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIK---ACRNEEEIRRVADFLNEISGM 157

Query: 178 AFSY-------LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
            F +       L++  ++   +  A  +   M  + + P+LL  NT I++L    K+ +A
Sbjct: 158 GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 217

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
              L ++    ++P+V TY  LI G+C    +  A  + D M  +GC P+ V+Y T++  
Sbjct: 218 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLING 277

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
           LC E R+ E  D++E+M+                        EEA ELV +M + GC P+
Sbjct: 278 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 337

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V TYTA+++G  R+G+L+ A  +  +M   G  PNTV+Y A +N LC  G+   A ++ +
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
             E      N  TY+ ++ GL   G + +A  +  +M+K G  PT V  N LI     +G
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 457

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
            ++ A + +      GC  +   +  L+ GF + G LE A     +M  C  +P+ V+YT
Sbjct: 458 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 517

Query: 519 TIIDALSKNGRVE-----------------------------------EATELMMKMLSK 543
            +ID  SK+G+V+                                   EA ++  KM+ +
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEE 600
           GL+P V+TY T+I   C+ GR +   K+   M  K+KC      Y+ +I  LC  G  +E
Sbjct: 578 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM-EKRKCLPNLYTYSSLIYGLCQEGKADE 636

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           A ++         +    T   LV     KG    A ++   M  R   PD
Sbjct: 637 AERM----SEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 683



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 168/545 (30%), Positives = 261/545 (47%), Gaps = 43/545 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKR-----VLRLMARRGIECRP--EAFSYLMVAYSRAGKL 192
           +P VY   L I   T LC          ++  M +RG  CRP  + ++ L+   SR GKL
Sbjct: 300 EPTVYTYTLPI---TALCAIEHEEEAIELVARMKKRG--CRPNVQTYTALISGLSRLGKL 354

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A+ +   M K  + PN +  N  I+ L VG + + AL+    M+  G   N  TYN +
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 414

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDS 311
           IKG C    I+ A+ L ++M   G  P  V+Y T++ GYL K                  
Sbjct: 415 IKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK------------------ 456

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 G +  A  L++ M + GC PD  TY  +V+GF + G+L+ A    Q+M   G  
Sbjct: 457 ------GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLN 510

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN VSYTA ++G   +GK   A  ++   EE    PN  +Y+ V++GL +E + SEA  +
Sbjct: 511 PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 570

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             +MV++G  P  +    LI  LCR G+   A K   +   + C  N+  ++SLI G CQ
Sbjct: 571 CDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 630

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           +G  +EA    + M     +P   TY+T++  L + GR  EA +L+  M  +G  P    
Sbjct: 631 EGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 686

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y +++  +C+   V+  LK+   + +K  Q   + Y  +I  LC  G +EEA  +   +L
Sbjct: 687 YYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNML 746

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
                AD     VLV+  L +G   L  K+   M ++N  P+++    +   L   GKS 
Sbjct: 747 EKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSI 806

Query: 670 EADTL 674
           E++ L
Sbjct: 807 ESEPL 811



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 179/364 (49%), Gaps = 20/364 (5%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A R+L LM   G  C P+ ++Y  L+  +S+ GKL +A +    M +  + PN +     
Sbjct: 462 AARLLDLMKENG--CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTAL 519

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I       K+  AL  L+RM+  G  PNV +YN +I G    +R  +A K+ D+M  +G 
Sbjct: 520 IDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGL 579

Query: 278 SPDKVSYYTVMGYLCKEKRIK---------EVRDLMEKMVNDSNLFH---DQGRIEEAKE 325
            P+ ++Y T++  LC+  R +         E R  +  +   S+L +    +G+ +EA+ 
Sbjct: 580 LPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE- 638

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
              +MS++GC P + TY+ +V+G CR G   +A+++++ M   G  P+   Y + L   C
Sbjct: 639 ---RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHC 695

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            N +   A ++ ++ E + +  +   Y  ++  L + G++ EA  +   M++K +    +
Sbjct: 696 KNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEI 755

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
              +L+  L +EG++D   K +    +K    N+  +  L R   + G   E+  L D +
Sbjct: 756 VWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 815

Query: 506 YLCK 509
            + K
Sbjct: 816 KVLK 819


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/523 (27%), Positives = 253/523 (48%), Gaps = 47/523 (8%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P  ++Y  L+  +   G+L+  +     M++    PN++  NT I       ++ +A   
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           L+ M   G+ PN+++YN +I G C    +K+A ++++EM  KG +PD+V+Y T++   CK
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127

Query: 294 EKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
           E                       G   +A  +  +M + G  P VVTYTA++N  C+  
Sbjct: 128 E-----------------------GNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKAR 164

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            L++A +   QM   G +PN  +YT  ++G    G   EA  ++N   E  ++P+ +TY+
Sbjct: 165 NLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYN 224

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
             +HG     ++ EA  VV+EMV+KG  P  V  + +I   CR+G++D A +  QE + K
Sbjct: 225 AFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 284

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G + + V ++SLI+G C+   L EA  L  +M      PD  TYTT+I+A    G + +A
Sbjct: 285 GVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKA 344

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIEN 591
             L  +M+ KG +P  VTY  +I+   +  R  +  +LL K++ ++   +   Y+ +IEN
Sbjct: 345 LHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIEN 404

Query: 592 ---------------LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
                           C  G + EA ++   ++    K   +  +V++  +   G    A
Sbjct: 405 CSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKA 464

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE-----ADTL 674
           + +   M +   +P       + + L  EG +EE      DTL
Sbjct: 465 FNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL 507



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 139/430 (32%), Positives = 216/430 (50%), Gaps = 25/430 (5%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M ++ V+PN+   N  I       +L K L     M+  G  PNV+TYN LI  YC + R
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           I +A  L+  M  KG  P+ +SY  ++  LC+E                       G ++
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCRE-----------------------GSMK 97

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA E++ +M   G  PD VTY  ++NG+C+ G   QA  +  +M  +G  P+ V+YTA +
Sbjct: 98  EAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALI 157

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           N +C       A E  +        PN  TY+ ++ G  R+G L+EA  ++ EM + GF 
Sbjct: 158 NSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 217

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P+ V  N  I   C   +M+ A   +QE + KG A +VV+++++I GFC+KG+L+ A  +
Sbjct: 218 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 277

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
             +M      PD VTY+++I  L +  R+ EA +L  +ML  GL P   TY T+I+ YC 
Sbjct: 278 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 337

Query: 562 VGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G +   L L ++M+ K     A  Y+ +I  L       EA ++L K++   S     T
Sbjct: 338 EGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVT 397

Query: 620 CHVLVESYLN 629
              L+E+  N
Sbjct: 398 YDTLIENCSN 407



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 233/485 (48%), Gaps = 44/485 (9%)

Query: 167 MARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           M R G  C P   +Y  L+ AY + G++  A  +L  M    + PNL+  N  I+ L   
Sbjct: 36  MERNG--CLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCRE 93

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             + +A   LE M   G TP+ +TYN L+ GYC       A+ +  EM   G SP  V+Y
Sbjct: 94  GSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTY 153

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
             ++  +CK + +                         A E  +QM   G  P+  TYT 
Sbjct: 154 TALINSMCKARNLN-----------------------RAMEFFDQMRIRGLRPNERTYTT 190

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++GF R G L++A ++L +M   G  P+ V+Y AF++G C   +  EA  ++    E+ 
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P+ ++YS ++ G  R+G+L  A  + +EMV+KG  P  V  + LIQ LC   ++  A 
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 310

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
              QE L+ G   +   +T+LI  +C +GDL +AL L D+M      PD VTY+ +I+ L
Sbjct: 311 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 370

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR---------------YCQVGRVEDLL 569
           +K  R  EA  L+ K++ +  VP+ VTY T+I                 +C  G + +  
Sbjct: 371 NKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEAD 430

Query: 570 KLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           ++ E M+ +  +     YN +I   C  G L +A  +  +++ +       T   L+++ 
Sbjct: 431 RVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 490

Query: 628 LNKGI 632
             +G+
Sbjct: 491 FKEGM 495



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 230/501 (45%), Gaps = 40/501 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++   K      A  +L+ M+ +G++    +++ ++    R G ++ A  +L  
Sbjct: 46  VTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEE 105

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M      P+ +  NT ++         +AL     M   G++P+V+TY  LI   C    
Sbjct: 106 MGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN 165

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +  A++  D+M ++G  P++ +Y T++                       + F  QG + 
Sbjct: 166 LNRAMEFFDQMRIRGLRPNERTYTTLI-----------------------DGFSRQGLLN 202

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA  ++N+M++ G  P VVTY A ++G C +  +++A  ++Q+M   G  P+ VSY+  +
Sbjct: 203 EAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTII 262

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G C  G+   A +M     E+  +P+A+TYS ++ GL    +L+EACD+ +EM+  G  
Sbjct: 263 SGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLP 322

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P       LI + C EG ++ A     E ++KG   + V ++ LI G  ++    EA  L
Sbjct: 323 PDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 382

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSK---------------NGRVEEATELMMKMLSKGLV 546
           L  +   +  P  VTY T+I+  S                 G + EA  +   M+ +   
Sbjct: 383 LFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHK 442

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV--IENLCSFGYLEEAGKI 604
           P    Y  +IH +C+ G +     L ++M+           +  I+ L   G  EE  ++
Sbjct: 443 PGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEV 502

Query: 605 LGKVLRTASKADASTCHVLVE 625
           +G  LR+    +A    VLVE
Sbjct: 503 IGDTLRSCRLNEAELAKVLVE 523



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 204/446 (45%), Gaps = 45/446 (10%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  D + Y  +L    K      A  +   M R G+      ++ L+ +  +A  L  AM
Sbjct: 111 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 170

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
                M+   + PN     T I        L +A R L  M  +G +P+V+TYN  I G+
Sbjct: 171 EFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGH 230

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C L R+++A+ ++ EM  KG +PD VSY T++   C+                       
Sbjct: 231 CVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCR----------------------- 267

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G ++ A ++  +M + G  PD VTY++++ G C +  L +A  + Q+M   G  P+  +
Sbjct: 268 KGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFT 327

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YT  +N  C  G   +A  + +    + + P+A+TYSV+++GL ++ +  EA  ++ +++
Sbjct: 328 YTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLI 387

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            +   P+ V  + LI++                C N    +   +  +LI+GFC KG + 
Sbjct: 388 YEESVPSDVTYDTLIEN----------------CSN----IEFKSVVALIKGFCMKGLMH 427

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           EA  + + M      P    Y  II    + G + +A  L  +M+  G VP  VT  T+I
Sbjct: 428 EADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLI 487

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCR 582
               + G  E++ +++   L  + CR
Sbjct: 488 KALFKEGMNEEMSEVIGDTL--RSCR 511



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 189/388 (48%), Gaps = 29/388 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  + K +    A      M  RG+      ++ L+  +SR G L  A  +L+ 
Sbjct: 151 VTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNE 210

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M ++  +P+++  N  IH   V  ++ +AL  ++ M   G+ P+V++Y+ +I G+C    
Sbjct: 211 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 270

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
           +  A ++  EM  KG SPD V+Y +++  LC+ +R+ E  DL ++M++            
Sbjct: 271 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 330

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             N +  +G + +A  L ++M   G +PD VTY+ ++NG  +     +AK++L ++ +  
Sbjct: 331 LINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 390

Query: 370 CKPNTVSY---------------TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
             P+ V+Y                A + G C  G   EA  +  +  E    P    Y+V
Sbjct: 391 SVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNV 450

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++HG  R G L +A ++ +EM+  GF P  V +  LI++L +EG  +   + + + L + 
Sbjct: 451 IIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL-RS 509

Query: 475 CAVNVVNFTSLIRGFCQK-GDLEEALSL 501
           C +N      ++     K G++E  L++
Sbjct: 510 CRLNEAELAKVLVEINHKEGNMEAVLNV 537


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 160/587 (27%), Positives = 282/587 (48%), Gaps = 50/587 (8%)

Query: 142  IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
            + Y  M+  L   K    A ++L  M   G++     +S L++AY+  G++  A  +L  
Sbjct: 439  VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDG 498

Query: 202  MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
            M  + VAP++   N  I  L    K+ +A  +L  +Q  G+ P+ +T+   I GY    +
Sbjct: 499  MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 558

Query: 262  IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VND----SN 312
            + +A K  DEM   G  P+   Y  ++    K   + E   +  ++     + D    S 
Sbjct: 559  MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSA 618

Query: 313  LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
              H     GR++EA ++ +++ + G +PDV TY+++++GFC+ GE+++A ++  +M   G
Sbjct: 619  FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 678

Query: 370  CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
              PN   Y A ++GLC +G    AR++ +   E+   P+++TYS ++ G  +   ++EA 
Sbjct: 679  IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 738

Query: 430  DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
             +  EM  KG  P     N L+   C+EG M+ A    +E L KG A   ++F +LI G+
Sbjct: 739  SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGY 797

Query: 490  CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
            C+   ++EA  L  +M   +  PD VTYTT+ID   K G++EEA  L  +M  + L+   
Sbjct: 798  CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDT 857

Query: 550  VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--------------QKCR------------- 582
            VTY ++++ Y ++G+  ++  L EKM++K                C+             
Sbjct: 858  VTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 917

Query: 583  ----------TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
                      T ++ +I  LC    L EA K+L ++     K   + C+ LV S+   G 
Sbjct: 918  VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGK 977

Query: 633  PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
               A +V   + +  L+PD      +    + +  SE+A  L+ + V
Sbjct: 978  MDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 178/663 (26%), Positives = 297/663 (44%), Gaps = 59/663 (8%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNL-----LRSLKPRQICAVLRSQADERVALQFFYWA 131
           LV  +C+  +LR A    +E + + L     + SL    +C V     DE V L+    +
Sbjct: 234 LVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQV--GDIDEAVELK---RS 288

Query: 132 DRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGK 191
             +     +   Y ++   L + K    AK     M + G++    A S L+  + R G 
Sbjct: 289 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 348

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +   + +  +M    +  NL+  N  IH L    K+ KA   L+ M   G  PN  T+  
Sbjct: 349 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCL 408

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI+GYC  H +  A++L+DEM  +   P  VSY  ++  LC  K +     L+EKM    
Sbjct: 409 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 468

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                         +  +GRIEEA+ L++ MS  G  PD+  Y A+++   + G++++A 
Sbjct: 469 LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 528

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM--- 416
             L ++   G KP+ V++ AF+ G    GK  EA +  +   +    PN   Y+V++   
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588

Query: 417 --------------------------------HGLRREGKLSEACDVVREMVKKGFFPTP 444
                                           HGL + G++ EA  V  E+ +KG  P  
Sbjct: 589 FKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 648

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
              + LI   C++G+++ A +   E   KG A N+  + +L+ G C+ GD++ A  L D 
Sbjct: 649 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 708

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M     +PD+VTY+T+ID   K+  V EA  L  +M SKG+ P    Y  ++H  C+ G 
Sbjct: 709 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 768

Query: 565 VEDLLKLLEKMLSKQKCRT-AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           +E  + L  +ML K    T ++N +I+  C    ++EA ++  +++      D  T   +
Sbjct: 769 MEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 828

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           ++ +   G    A  +   M  RNLI D      +       G+S E   L  + V +G 
Sbjct: 829 IDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG- 887

Query: 684 IQP 686
           ++P
Sbjct: 888 VKP 890



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 172/629 (27%), Positives = 272/629 (43%), Gaps = 85/629 (13%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIE-------------CR----------- 175
           D   Y  ++  L KT   +GAKRVL  M  +G+              C+           
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELK 286

Query: 176 ---------PEAFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAP--------------- 209
                    P  ++Y ++     RA ++  A      MQK  + P               
Sbjct: 287 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 346

Query: 210 --------------------NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
                               NL+  N  IH L    K+ KA   L+ M   G  PN  T+
Sbjct: 347 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTF 406

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             LI+GYC  H +  A++L+DEM  +   P  VSY  ++  LC  K +     L+EKM  
Sbjct: 407 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 466

Query: 310 DS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                           +  +GRIEEA+ L++ MS  G  PD+  Y A+++   + G++++
Sbjct: 467 SGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 526

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A   L ++   G KP+ V++ AF+ G    GK  EA +  +   +    PN   Y+V+++
Sbjct: 527 ASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 586

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  + G L EA  + R +   G  P     +  I  L + G++  A K   E   KG   
Sbjct: 587 GHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 646

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +V  ++SLI GFC++G++E+A  L D+M L    P+   Y  ++D L K+G ++ A +L 
Sbjct: 647 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 706

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSF 595
             M  KGL P  VTY T+I  YC+   V +   L  +M SK  Q     YN ++   C  
Sbjct: 707 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 766

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
           G +E+A  +  ++L+    A   + + L++ Y        A ++   M  + ++PD    
Sbjct: 767 GDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 825

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHI 684
             V +     GK EEA+ L     ER  I
Sbjct: 826 TTVIDWHCKAGKMEEANLLFKEMQERNLI 854



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 173/715 (24%), Positives = 285/715 (39%), Gaps = 138/715 (19%)

Query: 106 LKPRQICAVLRSQ--ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
           L P  I AVL      D +  L FFYW+  Q         + ++   L  ++L   A  V
Sbjct: 69  LNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGV 128

Query: 164 LRLMARRGIE-----------------CRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           L  M R                       P  F  L+ +Y R G L  A  V  + +  +
Sbjct: 129 LTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDS 188

Query: 207 VAPNLLICNTAI------------------------------HVLVVG-----NKLAKAL 231
           +  +L+ CN+ +                              +  +VG       L  A 
Sbjct: 189 ILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAK 248

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
           R L  M   G+ PN   Y+ +I+G C +  I +A++L   M  KG  P+  +Y  +   L
Sbjct: 249 RVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGL 308

Query: 292 CKEKRIKEVRDLMEKMVN-----DSNL-------FHDQGRIEEAKELVNQMSQMGCIPDV 339
           C+ KR+ E +   E+M       D N        F  +G I+E   + + M   G   ++
Sbjct: 309 CRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINL 368

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT------------------------- 374
           +TY  +++G C+ G++++A ++L+ M   GCKPN+                         
Sbjct: 369 ITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDE 428

Query: 375 ----------VSYTAFLNGLCH-----------------------------------NGK 389
                     VSY A +NGLCH                                    G+
Sbjct: 429 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGR 488

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             EAR +++        P+   Y+ ++  L + GK+ EA   + E+  +G  P  V    
Sbjct: 489 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 548

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
            I    + GKM  A K+  E L+ G   N   +T LI G  + G+L EALS+   ++   
Sbjct: 549 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALG 608

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             PD  T +  I  L KNGRV+EA ++  ++  KGLVP V TY ++I  +C+ G VE   
Sbjct: 609 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 668

Query: 570 KLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           +L ++M  K        YN +++ LC  G ++ A K+   +     + D+ T   +++ Y
Sbjct: 669 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 728

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                   A+ +   M ++ + P   +   +      EG  E+A  L    +++G
Sbjct: 729 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 783



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 234/504 (46%), Gaps = 27/504 (5%)

Query: 129  YWADRQWR-YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS 187
            Y  + Q R  + D + +   +   SKT     A +    M   G+      ++ L+  + 
Sbjct: 530  YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 589

Query: 188  RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
            +AG L  A+ +   +    V P++  C+  IH L+   ++ +AL+    ++  G+ P+V 
Sbjct: 590  KAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 649

Query: 248  TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            TY+ LI G+C    ++ A +L DEM LKG +P+   Y  ++  LCK              
Sbjct: 650  TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK-------------- 695

Query: 308  VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                      G I+ A++L + M + G  PD VTY+ +++G+C+   + +A  +  +M  
Sbjct: 696  ---------SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 746

Query: 368  HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
             G +P++  Y A ++G C  G   +A  +     ++ +    ++++ ++ G  +  K+ E
Sbjct: 747  KGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQE 805

Query: 428  ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
            A  + +EM+ K   P  V    +I   C+ GKM+ A    +E   +   V+ V +TSL+ 
Sbjct: 806  ASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMY 865

Query: 488  GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            G+ + G   E  +L + M      PD VTY  +I A  K   + EA +L  +++ KG++ 
Sbjct: 866  GYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLT 925

Query: 548  TVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
                +  +I   C+   + +  KLL++M  L  +    A N ++ +    G ++EA ++ 
Sbjct: 926  KGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVF 985

Query: 606  GKVLRTASKADASTCHVLVESYLN 629
              V       D +T   LV   LN
Sbjct: 986  EGVKSLGLVPDTTTLIDLVNGNLN 1009


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 252/491 (51%), Gaps = 30/491 (6%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C+P+ ++Y  L+  + R G++  A      M+   + PN+ +C+  I  L    +   AL
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
           R    MQ +GI  + + Y  L+ G     R+  A+ ++ EM   GC P+ V+Y +++  L
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 292 CKEKRIKEVRDLME---------KMVNDSNLFHD---QGRIEEAKELVNQMSQM------ 333
           CK       ++L E          MV  + L       G++E A  L  +M         
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 334 -GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
             C P+V+TY+ +++G C+   + QA ++L+ M   GC P+ ++YT  ++GLC   K   
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A E++    +    PN +TY+ ++HGL R  ++S+A  ++R+M  +G  P  V    LI 
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+ G++  A   + + ++KG   +++ +  LI G C+   ++E+++LL         P
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 364

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D VTY+++I  L ++ R++EA  L++ + S+G  P V+ Y T+I   C+ G+V++   L 
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 424

Query: 573 EKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE---- 625
           E M +   C      Y+ +I+ LC  G ++EA  +L +++R  +     T + L++    
Sbjct: 425 EVM-AGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCD 483

Query: 626 -SYLNKGIPLL 635
            ++L++ I L+
Sbjct: 484 LNHLDEAIELV 494



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 152/558 (27%), Positives = 276/558 (49%), Gaps = 50/558 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D ++Y  +L  L K K    A  +L  M   G  C P   +Y  L+    +  +   A  
Sbjct: 78  DTVIYTALLSGLWKEKRLDQALAILHEMRDHG--CEPNVVTYNSLIDGLCKNNEPDRAQE 135

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM-------QLAGITPNVLTYN 250
           +   M+    +P+++  NT +  L    KL +A+   + M            +PNV+TY+
Sbjct: 136 LFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYS 195

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI G C  +R+  A++L++ M  +GCSPD ++Y  ++  LCKE ++             
Sbjct: 196 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA----------- 244

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                       A E++ +M   GC+P++VTY ++++G CR   +  A  +++ M   GC
Sbjct: 245 ------------AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGC 292

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PN V+Y   ++GLC  G+  +A  M+    ++  TP+ + Y+++++GL +  ++ E+  
Sbjct: 293 TPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIA 352

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           ++R  V  G  P  V  + +I  LCR  ++D A + +    ++GC  +V+ +++LI G C
Sbjct: 353 LLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLC 412

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           + G ++EA  L + M     D D VTY+T+ID L K GRV+EA  L+ +M+  G  P+ +
Sbjct: 413 KAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTM 472

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGK 607
           TY ++I   C +  +++ ++L+E+M  +  C  +   YN +I  +C    ++ A  +L +
Sbjct: 473 TYNSLIKGLCDLNHLDEAIELVEEM-ERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQ 531

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVA------CRMFNRNLIPDLKLCKKVSER 661
                  A  +    +  S L  G+   A +VA        M +  +IPD      ++  
Sbjct: 532 AKARCVAAGGTALDTIAYSSLIDGL-CKAGRVAEALDYFQEMIDNGVIPD-----HITYS 585

Query: 662 LILEGKSEEADTLMLRFV 679
           ++LEG  +  D   LR +
Sbjct: 586 ILLEGLKKSKDLHELRHL 603



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 251/492 (51%), Gaps = 36/492 (7%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           ++++ L K K    A R  R M   GI      ++ L+    +  +L  A+ +L  M+  
Sbjct: 49  ILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDH 108

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
              PN++  N+ I  L   N+  +A    E M+    +P+++TYN L+ G     +++ A
Sbjct: 109 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 168

Query: 266 IKLIDEMPLK-------GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
           + L  EM  +        CSP+ ++Y  ++  LCK  R+                     
Sbjct: 169 MALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVS-------------------- 208

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
              +A EL+  M   GC PDV+TYT +V+G C+  ++  A ++L++M   GC PN V+Y 
Sbjct: 209 ---QAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYN 265

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           + L+GLC   +  +A  ++        TPN +TY  ++ GL + G++ +AC ++ +M+ K
Sbjct: 266 SLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK 325

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  +  N+LI  LC+  ++D +   ++  ++ G   +VV ++S+I G C+   L+EA
Sbjct: 326 GGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEA 385

Query: 499 LSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
             LL  +Y+  +   PD + Y+T+ID L K G+V+EA +L   M   G    VVTY T+I
Sbjct: 386 CRLL--LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLI 443

Query: 557 HRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
              C+ GRV++   LL +M  +        YN +I+ LC   +L+EA +++ ++ R+   
Sbjct: 444 DGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCA 503

Query: 615 ADASTCHVLVES 626
             A T ++L+  
Sbjct: 504 PSAVTYNILIHG 515



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 230/462 (49%), Gaps = 28/462 (6%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           L  L R+ K  +  A+ +   D R         D   R   + I Y ++++ L K     
Sbjct: 156 LDGLFRTGKLERAMALFQEMLDRR-------SHDMDDRCSPNVITYSVLIDGLCKANRVS 208

Query: 159 GAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
            A  +L  M  RG  C P+  +Y  L+    +  K+  A  VL  M  A   PNL+  N+
Sbjct: 209 QAVELLESMKARG--CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNS 266

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            +H L    +++ AL  +  M   G TPNV+TY  LI G C + R+KDA  ++ +M  KG
Sbjct: 267 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKG 326

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAK 324
            +PD + Y  ++  LCK  ++ E   L+ + V+          S++ +      R++EA 
Sbjct: 327 GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEAC 386

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L+  +   GC PDV+ Y+ +++G C+ G++D+A  + + M   GC  + V+Y+  ++GL
Sbjct: 387 RLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGL 446

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  G+  EA  ++         P+ +TY+ ++ GL     L EA ++V EM +    P+ 
Sbjct: 447 CKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSA 506

Query: 445 VEINLLIQSLCREGKMDGAKKFMQE----CLNKG-CAVNVVNFTSLIRGFCQKGDLEEAL 499
           V  N+LI  +CR  ++D A   +++    C+  G  A++ + ++SLI G C+ G + EAL
Sbjct: 507 VTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEAL 566

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
               +M      PD +TY+ +++ L K+  + E   L++  +
Sbjct: 567 DYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQM 608



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 219/483 (45%), Gaps = 67/483 (13%)

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+V TY  L++G+C    I  A +  DEM  K   P+      ++  LCK KR  +    
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSID---- 62

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                              A      M   G + D V YTA+++G  +   LDQA  +L 
Sbjct: 63  -------------------ALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILH 103

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI---------------NT--------- 399
           +M  HGC+PN V+Y + ++GLC N +   A+E+                NT         
Sbjct: 104 EMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTG 163

Query: 400 ------------------SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
                               ++  +PN ITYSV++ GL +  ++S+A +++  M  +G  
Sbjct: 164 KLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCS 223

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  +   +L+  LC+E K+  A + ++E L+ GC  N+V + SL+ G C+   + +AL+L
Sbjct: 224 PDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALAL 283

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           + DM      P+ VTY T+ID L K GRV++A  ++  M+ KG  P ++ Y  +I+  C+
Sbjct: 284 MRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCK 343

Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
             +V++ + LL + +S   +     Y+ VI  LC    L+EA ++L  V       D   
Sbjct: 344 ADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVIL 403

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
              L++     G    A+ +   M       D+     + + L   G+ +EA  L+ R V
Sbjct: 404 YSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMV 463

Query: 680 ERG 682
             G
Sbjct: 464 RMG 466



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 179/401 (44%), Gaps = 62/401 (15%)

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C PDV TY A++ GFCR GE+DQA++   +M      PN    +  ++GLC   +S++A 
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
                 +      + + Y+ ++ GL +E +L +A  ++ EM   G  P  V  N LI  L
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 455 C-----------------------------------REGKMDGAKKFMQECLNK------ 473
           C                                   R GK++ A    QE L++      
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 474 -GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
             C+ NV+ ++ LI G C+   + +A+ LL+ M      PD +TYT ++D L K  +V  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR------TAYN 586
           A E++ +ML  G VP +VTY +++H  C+  RV D L L+  M     CR        Y 
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM----TCRGCTPNVVTYG 300

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY-----LNKGIPLLAYKVAC 641
            +I+ LC  G +++A  +L  ++      D    ++L+        +++ I LL      
Sbjct: 301 TLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR----- 355

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           R  +  + PD+     V   L    + +EA  L+L    RG
Sbjct: 356 RAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 396


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 253/502 (50%), Gaps = 14/502 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y+ ++  L        A  VL  M RRG    P  +  ++ A  R G  R+A+ VL  + 
Sbjct: 125 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 184

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
               A ++  CN  ++ +     + +AL  L  +   G  P+V++YN ++KG C   R  
Sbjct: 185 ARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 244

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFHD-- 316
              +L++EM    C P+ V++ T++ YLC+    + V +++ +MV      D  ++    
Sbjct: 245 CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATII 304

Query: 317 -----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                +G +E A E++N+M   G  P+VV Y  ++ G C     ++ +++L +M+   C 
Sbjct: 305 DGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP 364

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            + V++   ++  C NG      E++    E    P+ ITY+ V++G  +EG + EA  +
Sbjct: 365 LDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVML 424

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           ++ M   G  P  +   ++++ LC   +   A+  M + + +GC +N + F +LI   C+
Sbjct: 425 LKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCK 484

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           KG +E+A+ LL  M +    PD ++Y+T+ID L K G+ +EA EL+  M++KG+ P  + 
Sbjct: 485 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 544

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y ++     + GR+  ++++ + +   + +     YN VI +LC  G  E A + L  ++
Sbjct: 545 YSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMV 604

Query: 610 RTASKADASTCHVLVESYLNKG 631
            +    + ST  +L+    ++G
Sbjct: 605 SSGCVPNESTYTILIRGLASEG 626



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 225/465 (48%), Gaps = 17/465 (3%)

Query: 219 HVLVVGNKLAKALRFLERMQLA-GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           + +V G   A  L    R+  A  + PN  TY  +++  C   RI DA+ ++DEMP +GC
Sbjct: 94  NAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGC 153

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDSNL----FHDQGRIEEAKE 325
           +P    Y+ ++   C+    +    ++E +        V + NL      DQG ++EA  
Sbjct: 154 APIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALH 213

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+  +   GC PDVV+Y AV+ G C        ++++++M    C PN V++   ++ LC
Sbjct: 214 LLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLC 273

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            NG      E++    E   TP+   Y+ ++ G+ +EG L  A +++  M   G  P  V
Sbjct: 274 RNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVV 333

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N L++ LC   + +  ++ + E  +K C ++ V F  L+  FCQ G ++  + LL+ M
Sbjct: 334 CYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 393

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 PD +TYTT+I+   K G ++EA  L+  M + G  P  ++Y  V+   C   R 
Sbjct: 394 LERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERW 453

Query: 566 EDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
            D   L+ +M+ +Q C      +N +I  LC  G +E+A ++L ++L      D  +   
Sbjct: 454 VDAEDLMSQMI-QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 512

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +++     G    A ++   M N+ + P+  +   ++  L  EG+
Sbjct: 513 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 557



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 218/423 (51%), Gaps = 14/423 (3%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P+  SY  ++     A +      ++  M + A  PN++  NT I  L       +  
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVH 282

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
             L +M   G TP++  Y  +I G C    ++ A ++++ MP  G  P+ V Y T++  L
Sbjct: 283 EVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGL 342

Query: 292 CKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           C  +R +E  +L+ +M +              + F   G ++   EL+ QM + GC+PDV
Sbjct: 343 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDV 402

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           +TYT V+NGFC+ G +D+A  +L+ M   GCKPNT+SYT  L GLC   + ++A ++++ 
Sbjct: 403 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 462

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             ++    N IT++ +++ L ++G + +A +++++M+  G  P  +  + +I  L + GK
Sbjct: 463 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
            D A + +   +NKG + N + ++S+     ++G + + + + D++       D V Y  
Sbjct: 523 TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNA 582

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +I +L K G  E A E +  M+S G VP   TY  +I      G V++  ++L ++ SK 
Sbjct: 583 VISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642

Query: 580 KCR 582
             R
Sbjct: 643 ALR 645



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 159/336 (47%), Gaps = 5/336 (1%)

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y A+V G+CR G+L+ A+++   +      PN  +Y   +  LC  G+  +A  +++   
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                P    Y V++    R G    A  V+ ++  +G        NL++ ++C +G +D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A   +++  + GC  +VV++ ++++G C          L+++M      P+ VT+ T+I
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--Q 579
             L +NG  E   E++ +M+  G  P +  Y T+I   C+ G +E   ++L +M S   +
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                YN +++ LCS    EE  ++L ++       D  T ++LV+ +   G+     ++
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
             +M  R  +PD+     V      EG  +EA  L+
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLL 425



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 16/273 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + + ++++   +  L      +L  M  RG  C P+  +Y  V   + + G +  A+ 
Sbjct: 366 DDVTFNILVDFFCQNGLVDRVIELLEQMLERG--CMPDVITYTTVINGFCKEGLIDEAVM 423

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M      PN +     +  L    +   A   + +M   G   N +T+N LI   C
Sbjct: 424 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLC 483

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND------- 310
               ++ AI+L+ +M + GCSPD +SY TV+  L K  +  E  +L+  MVN        
Sbjct: 484 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 543

Query: 311 -----SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                ++    +GRI +  ++ + +       D V Y AV++  C+ GE ++A + L  M
Sbjct: 544 IYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 603

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
              GC PN  +YT  + GL   G   EA+EM+ 
Sbjct: 604 VSSGCVPNESTYTILIRGLASEGFVKEAQEMLT 636



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 4/176 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           +PI +  ++  L K  L + A  +L+ M   G  C P+  SY  V     +AGK   A+ 
Sbjct: 471 NPITFNTLINFLCKKGLVEQAIELLKQMLVNG--CSPDLISYSTVIDGLGKAGKTDEALE 528

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L++M    ++PN +I ++    L    ++ K ++  + +Q   I  + + YN +I   C
Sbjct: 529 LLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLC 588

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
                + AI+ +  M   GC P++ +Y  ++  L  E  +KE ++++ ++ +   L
Sbjct: 589 KRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 253/510 (49%), Gaps = 33/510 (6%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +F+ LM  + + G +  A     MM K  + P++   N  +H L V   + +AL F   M
Sbjct: 272 SFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDM 331

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           +  G+ P+++TYN L  G+  L  I  A K++  M L G +PD V+Y  ++   C+   I
Sbjct: 332 ENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNI 391

Query: 298 KEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
           +E   L EKM++              +     GRI+EA  L+++M  +G  PD++TY+ +
Sbjct: 392 EESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVL 451

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G C+ G +++A ++ ++M      PN+   +A ++GL   G   EA+   ++  +   
Sbjct: 452 IHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDV 511

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
               I Y++++ G  + G + EA    +++++KG  PT V  N LI   C++GK+  A K
Sbjct: 512 AEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVK 571

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            +      G     V +T+L+ G+C++GD+     +L +M      P  +TYT ++  L 
Sbjct: 572 LLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLC 631

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRT 583
           K GR+ E+ +L+  M ++GL P  +TY TVI  +C+   ++   +L  +ML  S Q    
Sbjct: 632 KEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPV 691

Query: 584 AYNQVIENLCSFGYLEEAGKI----------LGKVLRTA------SKADASTCHVLVESY 627
            YN +I  LC +G L++A ++          L KV  T       +K D     V     
Sbjct: 692 TYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQM 751

Query: 628 LNKG--IPLLAYK-VACRMFNRNLIPDLKL 654
           + +G  + +  Y  V  R+  RNLI D K 
Sbjct: 752 VERGFEVSIRDYSAVINRLCKRNLITDAKF 781



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 150/620 (24%), Positives = 272/620 (43%), Gaps = 62/620 (10%)

Query: 78  VREVCRLIELRSAWSPK-LEGE----LRNLLRSLKPRQICAVLRSQADERVALQFFYWAD 132
           VR++  LI LRS  + K L G     L ++L + +  QI   LR    +  AL  F    
Sbjct: 50  VRQI--LIGLRSFGASKFLWGHHFQTLASVLNTHQVDQILLSLRVDNSDS-ALFLFDLLR 106

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
            ++ +RH  + ++++  ++++    +  +RVL  M          +   L+    R   L
Sbjct: 107 NEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDL 166

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            N ++            ++L C  +   +V       AL  L +M++  +  ++ TYN L
Sbjct: 167 NNVVW------------DMLACAYSRAEMV-----HDALFVLAKMKVLNLQVSIATYNSL 209

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           +    +L        + +E+   G   ++ +   ++  LC++ R+++    +        
Sbjct: 210 LY---NLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLR------- 259

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                   E   E      + G  P VV++ A+++GFC++G +D AK     M  +G  P
Sbjct: 260 --------ETGGE------EFG--PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLP 303

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           +  SY   L+GLC  G   EA E  N  E     P+ +TY+++ +G R  G +S A  VV
Sbjct: 304 DVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVV 363

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           + M+  G  P  V   +LI   C+ G ++ + K  ++ L++G  +++V +T L+   C+ 
Sbjct: 364 QRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKS 423

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G ++EA+ LL +M +    PD +TY+ +I  L K G VEEA EL  +M SK + P     
Sbjct: 424 GRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVC 483

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLR 610
             +I    + G + +     + +           YN +I+     G + EA +   +++ 
Sbjct: 484 SAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIE 543

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                   T + L+  +  KG    A K+   +    L+P       V+   ++ G  EE
Sbjct: 544 KGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVP-----TSVTYTTLMNGYCEE 598

Query: 671 ADTL----MLRFVERGHIQP 686
            D      ML  +E   I+P
Sbjct: 599 GDMHSMFDMLHEMEAKAIKP 618



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/491 (22%), Positives = 212/491 (43%), Gaps = 82/491 (16%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++        L  GA +V++ M   G+      ++ L+  + + G +  +  + 
Sbjct: 339 DIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLK 398

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    +  +++     +  L    ++ +A+  L  M++ G+ P++LTY+ LI G C  
Sbjct: 399 EKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKR 458

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR---------DLMEKMVND 310
             +++AI+L +EM  K   P+      ++  L ++  I E +         D+ E+++  
Sbjct: 459 GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILY 518

Query: 311 SNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           + +   +   G I EA     Q+ + G  P +VT+ +++ GFC+ G+L +A K+L  +  
Sbjct: 519 NIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKV 578

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           HG  P +V+YT  +NG C  G      +M++  E +   P  ITY+VV+ GL +EG+L E
Sbjct: 579 HGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHE 638

Query: 428 ACDVVREMVKKGFFP-----------------------------------TPVEINLLIQ 452
           +  +++ M  +G FP                                   +PV  N+LI 
Sbjct: 639 SVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLIN 698

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY------ 506
            LC  G +  A + +    ++   +  V +T++I+  C KGD++ AL     M       
Sbjct: 699 GLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEV 758

Query: 507 -----------LCKKD------------------PDTVTYTTIIDALSKNGRVEEATELM 537
                      LCK++                  PD      +++A  ++G      E+ 
Sbjct: 759 SIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIF 818

Query: 538 MKMLSKGLVPT 548
             M+  GL+P 
Sbjct: 819 AMMIKCGLLPV 829


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 253/502 (50%), Gaps = 14/502 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y+ ++  L        A  VL  M RRG    P  +  ++ A  R G  R+A+ VL  + 
Sbjct: 162 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 221

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
               A ++  CN  ++ +     + +AL  L  +   G  P+V++YN ++KG C   R  
Sbjct: 222 ARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 281

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFHD-- 316
              +L++EM    C P+ V++ T++ YLC+    + V +++ +MV      D  ++    
Sbjct: 282 CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATII 341

Query: 317 -----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                +G +E A E++N+M   G  P+VV Y  ++ G C     ++ +++L +M+   C 
Sbjct: 342 DGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP 401

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            + V++   ++  C NG      E++    E    P+ ITY+ V++G  +EG + EA  +
Sbjct: 402 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVML 461

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           ++ M   G  P  +   ++++ LC   +   A+  M + + +GC +N + F +LI   C+
Sbjct: 462 LKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCK 521

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           KG +E+A+ LL  M +    PD ++Y+T+ID L K G+ +EA EL+  M++KG+ P  + 
Sbjct: 522 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 581

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y ++     + GR+  ++++ + +   + +     YN VI +LC  G  E A + L  ++
Sbjct: 582 YSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMV 641

Query: 610 RTASKADASTCHVLVESYLNKG 631
            +    + ST  +L+    ++G
Sbjct: 642 SSGCVPNESTYTILIRGLASEG 663



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 225/465 (48%), Gaps = 17/465 (3%)

Query: 219 HVLVVGNKLAKALRFLERMQLA-GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           + +V G   A  L    R+  A  + PN  TY  +++  C   RI DA+ ++DEMP +GC
Sbjct: 131 NAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGC 190

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDSNL----FHDQGRIEEAKE 325
           +P    Y+ ++   C+    +    ++E +        V + NL      DQG ++EA  
Sbjct: 191 APIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALH 250

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+  +   GC PDVV+Y AV+ G C        ++++++M    C PN V++   ++ LC
Sbjct: 251 LLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLC 310

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            NG      E++    E   TP+   Y+ ++ G+ +EG L  A +++  M   G  P  V
Sbjct: 311 RNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVV 370

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N L++ LC   + +  ++ + E  +K C ++ V F  L+  FCQ G ++  + LL+ M
Sbjct: 371 CYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 430

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 PD +TYTT+I+   K G ++EA  L+  M + G  P  ++Y  V+   C   R 
Sbjct: 431 LEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERW 490

Query: 566 EDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
            D   L+ +M+ +Q C      +N +I  LC  G +E+A ++L ++L      D  +   
Sbjct: 491 VDAEDLMSQMI-QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 549

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +++     G    A ++   M N+ + P+  +   ++  L  EG+
Sbjct: 550 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 594



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 224/437 (51%), Gaps = 16/437 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +LR +   G  C P+  SY  ++     A +      ++  M + A  PN++  NT 
Sbjct: 248 ALHLLRDLPSFG--CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 305

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I  L       +    L +M   G TP++  Y  +I G C    ++ A ++++ MP  G 
Sbjct: 306 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 365

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
            P+ V Y T++  LC  +R +E  +L+ +M +              + F   G ++   E
Sbjct: 366 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 425

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+ QM + GC+PDV+TYT V+NGFC+ G +D+A  +L+ M   GCKPNT+SYT  L GLC
Sbjct: 426 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 485

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
              + ++A ++++   ++    N IT++ +++ L ++G + +A +++++M+  G  P  +
Sbjct: 486 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 545

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             + +I  L + GK D A + +   +NKG + N + ++S+     ++G + + + + D++
Sbjct: 546 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 605

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                  D V Y  +I +L K G  E A E +  M+S G VP   TY  +I      G V
Sbjct: 606 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 665

Query: 566 EDLLKLLEKMLSKQKCR 582
           ++  ++L ++ SK   R
Sbjct: 666 KEAQEMLTELCSKGALR 682



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 242/479 (50%), Gaps = 14/479 (2%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           P +Y+++LE   +    + A RVL  +  RG        + ++ A    G +  A+++L 
Sbjct: 194 PPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLR 253

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            +      P+++  N  +  L +  +       +E M      PN++T+N LI   C   
Sbjct: 254 DLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNG 313

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNL---- 313
             +   +++ +M   GC+PD   Y T++  +CKE  ++   +++ +M +     N+    
Sbjct: 314 LFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYN 373

Query: 314 -----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                     R EE +EL+ +M    C  D VT+  +V+ FC+ G +D+  ++L+QM  H
Sbjct: 374 TLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 433

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           GC P+ ++YT  +NG C  G   EA  ++ +       PN I+Y++V+ GL    +  +A
Sbjct: 434 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDA 493

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            D++ +M+++G    P+  N LI  LC++G ++ A + +++ L  GC+ ++++++++I G
Sbjct: 494 EDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 553

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
             + G  +EAL LL+ M      P+T+ Y++I  ALS+ GR+ +  ++   +    +   
Sbjct: 554 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 613

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKIL 605
            V Y  VI   C+ G  E  ++ L  M+S       + Y  +I  L S G+++EA ++L
Sbjct: 614 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 672



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 158/336 (47%), Gaps = 5/336 (1%)

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y A+V G+CR G+L+ A+++   +      PN  +Y   +  LC  G+  +A  +++   
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                P    Y V++    R G    A  V+ ++  +G        NL++ ++C +G +D
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A   +++  + GC  +VV++ ++++G C          L+++M      P+ VT+ T+I
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--Q 579
             L +NG  E   E++ +M+  G  P +  Y T+I   C+ G +E   ++L +M S   +
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                YN +++ LCS    EE  ++L ++       D  T ++LV+ +   G+     ++
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
             +M     +PD+     V      EG  +EA  L+
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 462



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 4/176 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           +PI +  ++  L K  L + A  +L+ M   G  C P+  SY  V     +AGK   A+ 
Sbjct: 508 NPITFNTLINFLCKKGLVEQAIELLKQMLVNG--CSPDLISYSTVIDGLGKAGKTDEALE 565

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L++M    ++PN +I ++    L    ++ K ++  + +Q   I  + + YN +I   C
Sbjct: 566 LLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLC 625

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
                + AI+ +  M   GC P++ +Y  ++  L  E  +KE ++++ ++ +   L
Sbjct: 626 KRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 681


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 263/537 (48%), Gaps = 19/537 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+LR +  RG      A+  ++      G   +A  +   M    V PNL   N  +H
Sbjct: 139 ALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLH 194

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L     + +A   L ++   G++ N+ TYN  I+G C+  R+ +A++L+D M      P
Sbjct: 195 ALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-P 253

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKELV 327
           D V+Y T++  LCK+   +E    + +M+N   L  D               ++EA EL+
Sbjct: 254 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 313

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
                 G +PD VTY +++NG C  G++++A ++  +    G KP+ V Y + + GLC  
Sbjct: 314 KDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 373

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G  L A +++N   EE   P+  TY++V++GL + G +S+A  V+ + + KG+ P     
Sbjct: 374 GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF 433

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N LI   C+  K+D A + ++     G A + + + S++ G C+ G + E      +M L
Sbjct: 434 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 493

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ +TY  +I+   ++ ++EEA+++++KM  +GL P  V++ T+I+ +C+ G +E 
Sbjct: 494 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 553

Query: 568 LLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
              L +K+  K    TA  +N +I        +  A KI  ++L    +AD+ T  VL++
Sbjct: 554 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 613

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                     AY     M  +  IP +    +V   L +  +  +A  ++   V+ G
Sbjct: 614 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 670



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 230/475 (48%), Gaps = 41/475 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  ++  L K  + Q A   LR M  +G  C P+ F+Y  ++  Y +   ++ A  
Sbjct: 254 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG--CLPDDFTYNTIIDGYCKISMVQEATE 311

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L         P+ +   + I+ L     + +AL      Q  GI P+++ YN L+KG C
Sbjct: 312 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 371

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               I  A+++++EM  +GC PD  +Y  V+  LCK                        
Sbjct: 372 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK-----------------------M 408

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G I +A  ++N     G +PDV T+  +++G+C+  +LD A +++++M+ +G  P+T++Y
Sbjct: 409 GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITY 468

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
            + LNGLC  GK  E  E       +   PN ITY++++    R  K+ EA  V+ +M +
Sbjct: 469 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ 528

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P  V  N LI   CR G ++GA    Q+   KG +     F +LI  F  K ++  
Sbjct: 529 EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 588

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI- 556
           A  + D+M       D+ TY  +ID   K   V+ A   +++M+ KG +P++ T+  VI 
Sbjct: 589 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 648

Query: 557 -----HRYCQ-VGRVEDLLKL------LEKMLSKQKCRTAYNQV-IENLCSFGYL 598
                HR  Q VG +  ++K+      ++ +L+  K   A  ++ +E+L   G++
Sbjct: 649 SLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHI 703



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 236/492 (47%), Gaps = 46/492 (9%)

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
           AY+RAG+LR+A+     M   A  P     N  +  LV      +A +   RM  AG++P
Sbjct: 59  AYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSP 118

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG----CS---------------------- 278
           ++ T+   ++ +C   R   A++L+  +P +G    C+                      
Sbjct: 119 DLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQML 178

Query: 279 -----PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH---------DQGRIE 321
                P+  ++  V+  LCK   + E   L+ K++      NLF          + GR+ 
Sbjct: 179 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLP 238

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA  LV+ M     +PDVVTY  ++ G C+     +A   L++M + GC P+  +Y   +
Sbjct: 239 EAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 297

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G C      EA E++  +  + + P+ +TY  +++GL  EG +  A ++  E   KG  
Sbjct: 298 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 357

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N L++ LC +G +  A + M E   +GC  ++  +  +I G C+ G++ +A  +
Sbjct: 358 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 417

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           ++D  +    PD  T+ T+ID   K  +++ A +L+ +M   G+ P  +TY +V++  C+
Sbjct: 418 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 477

Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G+V ++ +  ++M+ K        YN +IEN C    +EEA K++ K+ +     DA +
Sbjct: 478 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 537

Query: 620 CHVLVESYLNKG 631
            + L+  +   G
Sbjct: 538 FNTLIYGFCRNG 549



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 201/467 (43%), Gaps = 25/467 (5%)

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
           R+  A I P    Y   I+ Y    R++DA+   + M L  C P   +Y  +M  L    
Sbjct: 43  RLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAA 99

Query: 296 RIKEVRDLMEKMVND--SNLFHDQ----------GRIEEAKELVNQMSQMGCIPDVVTYT 343
              +   +  +M+    S   H             R   A  L+  +   G     V Y 
Sbjct: 100 YHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYC 155

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            VV G    G    A+++  QM H    PN  ++   L+ LC  G  LEA  ++    + 
Sbjct: 156 TVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR 215

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
             + N  TY++ + GL   G+L EA  +V  M +    P  V  N LI+ LC++     A
Sbjct: 216 GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEA 274

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
             +++  +N+GC  +   + ++I G+C+   ++EA  LL D       PD VTY ++I+ 
Sbjct: 275 MHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 334

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
           L   G VE A EL  +  +KG+ P +V Y +++   C  G +   L+++ +M +++ C  
Sbjct: 335 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM-AEEGCHP 393

Query: 584 ---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               YN VI  LC  G + +A  ++   +      D  T + L++ Y  +     A ++ 
Sbjct: 394 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 453

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG-HIQP 686
            RM+   + PD      V   L   GK  E +      + +G H  P
Sbjct: 454 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 500



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/309 (19%), Positives = 128/309 (41%), Gaps = 27/309 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y  D   +  +++   K      A +++  M   GI      ++ ++    +AGK+    
Sbjct: 426 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 485

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
                M      PN +  N  I      NK+ +A + + +M   G+ P+ +++N LI G+
Sbjct: 486 ETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGF 545

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C    ++ A  L  ++  KG S    ++ T++G                        F  
Sbjct: 546 CRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG-----------------------AFSG 582

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +  +  A+++ ++M   G   D  TY  +++G C+   +D+A   L +M   G  P+  +
Sbjct: 583 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMST 642

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           +   +N L  N +  +A  +I+   +    P  +    +++  ++E  ++    +V +++
Sbjct: 643 FGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNADKKE--IAAPKILVEDLM 698

Query: 437 KKGFFPTPV 445
           KKG    P 
Sbjct: 699 KKGHISYPT 707


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 256/490 (52%), Gaps = 26/490 (5%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS-RAGKLRNAMYVL 199
           P+V+ +  ++L +      A+++   + R G+    ++ +  +   S     ++ A+ V 
Sbjct: 171 PLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVF 230

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
               +  V  N + CN  +H L    K+ +A   L +M   G  P+V++Y  ++ GYC +
Sbjct: 231 EEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRI 290

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             +   +KL+DE+  KG  PD+  Y  ++  LCK                        G 
Sbjct: 291 GELDKVLKLVDELKGKGLKPDEYIYNNIILLLCK-----------------------NGE 327

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           + EA++L+  M + G  PD V YT V++GFC++G +  A K+  +M      P+ V+YT+
Sbjct: 328 VVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTS 387

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G+C +GK +EAREM N    +   P+ +TY+ ++ G  + G++ EA  V  +MV+KG
Sbjct: 388 VIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKG 447

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  V    L   LC+ G++D A + + E   KG   NV  + +++ G C+ G++E+ +
Sbjct: 448 LTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTV 507

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            L+++M L    PDT+TYTT++DA  K G + +A EL+  ML+K L PT+VT+  +++ +
Sbjct: 508 KLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGF 567

Query: 560 CQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C  G +ED  +L+E ML K      T +N +++  C    +    +I   +       D+
Sbjct: 568 CMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDS 627

Query: 618 STCHVLVESY 627
           +T ++L++ +
Sbjct: 628 NTYNILIKGH 637



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 218/446 (48%), Gaps = 25/446 (5%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G+L   + ++  ++   + P+  I N  I +L    ++ +A + L  M+  G+ P+ +
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            Y  +I G+C L  +  A KL DEM  K   PD V+Y +V+  +CK              
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICK-------------- 394

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     G++ EA+E+ N+M   G  PD VTYTA+++G+C+ GE+ +A  +  QM  
Sbjct: 395 ---------SGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQ 445

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN V+YTA  +GLC NG+   A E+++    +   PN  TY+ +++GL + G + +
Sbjct: 446 KGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQ 505

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
              ++ EM   GF+P  +    L+ + C+ G+M  A + ++  LNK     +V F  L+ 
Sbjct: 506 TVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMN 565

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC  G LE+   L++ M      P+  T+ +++        +   TE+   M  +G++P
Sbjct: 566 GFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMP 625

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKIL 605
              TY  +I  +C+   +++   L ++M+ K    TA  Y+ +I          EA K+ 
Sbjct: 626 DSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLF 685

Query: 606 GKVLRTASKADASTCHVLVESYLNKG 631
            ++ +    A+     + V+    +G
Sbjct: 686 EEMRKHGLVAEKDIYDIFVDVNYEEG 711



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 210/441 (47%), Gaps = 23/441 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D  +Y  ++ +L K      A+++LR M + G+      ++ ++  + + G +  A  
Sbjct: 309 KPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACK 368

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M++  + P+++   + IH +    K+ +A      M + G+ P+ +TY  LI GYC
Sbjct: 369 LFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYC 428

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               +K+A  + ++M  KG +P+ V+Y  +   LCK                        
Sbjct: 429 KAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK-----------------------N 465

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G I+ A EL+++MS+ G  P+V TY  +VNG C++G ++Q  K++++M   G  P+T++Y
Sbjct: 466 GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITY 525

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T  ++  C  G+  +A E++     +   P  +T++V+M+G    G L +   ++  M++
Sbjct: 526 TTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLE 585

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P     N L++  C +  M    +  +   ++G   +   +  LI+G C+  +++E
Sbjct: 586 KGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKE 645

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A  L  +M          TY  +I    K  +  EA +L  +M   GLV     Y   + 
Sbjct: 646 AWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVD 705

Query: 558 RYCQVGRVEDLLKLLEKMLSK 578
              + G  E  L+L ++ +++
Sbjct: 706 VNYEEGNWEITLELCDEFMTE 726



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 151/590 (25%), Positives = 258/590 (43%), Gaps = 81/590 (13%)

Query: 106 LKPRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIVYYM--MLEILSKTKLCQGAKR 162
            KP  +  VL + + D  + L  F WA  Q + +  P +  +  ++ +   +   Q AKR
Sbjct: 77  FKPSHLIWVLINLKNDYPLVLNLFNWAKSQSQQQFHPTLESLCIVVHLSVASNDIQTAKR 136

Query: 163 -VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
            V    A+  I+             S++  L   M + +     +   + L+ +    VL
Sbjct: 137 LVFEFCAKPKIDV------------SKSFHLFTEMLIYTYKDWGS---HPLVFDLYFQVL 181

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLI-KGYCDLHRIKDAIKLIDEMPLKGCSPD 280
           V    + +A +   ++   G+  +V + N  + +  C+   IK A+K+ +E P  G   +
Sbjct: 182 VENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWN 241

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
            VS   V+  LC+                        G++ EA  L+ QM+  G  PDVV
Sbjct: 242 TVSCNIVLHCLCQ-----------------------LGKVREAHNLLVQMTDRGNFPDVV 278

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           +Y  VV+G+CR+GELD+  K++ ++   G KP+   Y   +  LC NG+ +         
Sbjct: 279 SYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVV--------- 329

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
                                     EA  ++R M K G FP  V    +I   C+ G +
Sbjct: 330 --------------------------EAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNV 363

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             A K   E   K    ++V +TS+I G C+ G + EA  + ++M +   +PD VTYT +
Sbjct: 364 SAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTAL 423

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-- 578
           ID   K G ++EA  +  +M+ KGL P VVTY  +    C+ G ++   +LL +M  K  
Sbjct: 424 IDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGL 483

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
           Q     YN ++  LC  G +E+  K++ ++       D  T   L+++Y   G    A++
Sbjct: 484 QPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHE 543

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           +   M N+ L P L     +     + G  E+ + L+   +E+G I P +
Sbjct: 544 LLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG-IMPNA 592



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 184/410 (44%), Gaps = 35/410 (8%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAG 190
           R+W    D +VY  ++    K      A ++   M R+ I   P+  +Y  V +   ++G
Sbjct: 339 RKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKI--VPDIVTYTSVIHGICKSG 396

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           K+  A  + + M    + P+ +     I       ++ +A     +M   G+TPNV+TY 
Sbjct: 397 KMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYT 456

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            L  G C    I  A +L+ EM  KG  P+  +Y T++  LCK                 
Sbjct: 457 ALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCK----------------- 499

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                  G IE+  +L+ +M   G  PD +TYT +++ +C++GE+ +A ++L+ M +   
Sbjct: 500 ------IGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRL 553

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P  V++   +NG C +G   +   +I    E+   PNA T++ +M     +  +    +
Sbjct: 554 QPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTE 613

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           + + M  +G  P     N+LI+  C+   M  A    +E + KG +V    + +LIRGF 
Sbjct: 614 IYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFY 673

Query: 491 QKGDLEEALSLLDDM----YLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
           ++    EA  L ++M     + +KD     Y   +D   + G  E   EL
Sbjct: 674 KRKKFVEARKLFEEMRKHGLVAEKD----IYDIFVDVNYEEGNWEITLEL 719


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 165/597 (27%), Positives = 284/597 (47%), Gaps = 31/597 (5%)

Query: 51  DSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKP-- 108
           DS + +RV  E + R V       + LV+ VC+  ++  A    L  E+  ++  +KP  
Sbjct: 356 DSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKA--DALLNEM--IMVGIKPDT 411

Query: 109 ----RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYY--MMLEILSKTKLCQGAKR 162
                 I   L+ Q   RV            +    P  Y   M++  L +    + A R
Sbjct: 412 QTYNNMIEGYLKEQNTSRVK----DLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASR 467

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           V  +M   G++     ++ L+  + + G+ + A+ +L +M K  V P++L  N+ I  L 
Sbjct: 468 VFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLC 527

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              K+ +A  +L  M   G+ PNV TY  LI GYC    ++ A +   EM   G +P+ V
Sbjct: 528 KSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDV 587

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------NLFHD---QGRIEEAKELVNQM 330
               ++   CKE    E   +   M+  S          L H     G+++ A EL+++ 
Sbjct: 588 VCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF 647

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            + G +PDV TY ++++GFC+ G + +A ++ + M   G  PN ++Y A +NGLC  G+ 
Sbjct: 648 LEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEI 707

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             ARE+ +    +    NA+TY+ ++ G  + G LS+A  +  EM  KG  P     + L
Sbjct: 708 ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSAL 767

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I    +EG  + A     E + KG A +  +  +L+ GFC+ G + EA  LL+DM     
Sbjct: 768 IDGCRKEGNTEKALSLFLESVQKGFA-STSSLNALMDGFCKSGKVIEANQLLEDMVDKHV 826

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            PD VTYT +ID   K G ++EA +  + M  + L+P  +TY  ++  Y   GR  ++  
Sbjct: 827 KPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFA 886

Query: 571 LLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           L ++M++K  +     ++ +I+     G   +  K++  +L+       + CHVL++
Sbjct: 887 LFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLID 943



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 153/550 (27%), Positives = 259/550 (47%), Gaps = 27/550 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y +++  L +      A  + +LM ++G+      +S L+  + +  +   A  +L  
Sbjct: 272 VTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEE 331

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + P  +     I   +      +A R  E M   G+  N+ TYN L+KG C    
Sbjct: 332 MFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGD 391

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
           ++ A  L++EM + G  PD  +Y  ++ GYL KE+    V+DL+ +M   SNL       
Sbjct: 392 MEKADALLNEMIMVGIKPDTQTYNNMIEGYL-KEQNTSRVKDLLSEM-KKSNL------- 442

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
                          +P   T   ++NG CR G ++ A ++ + M   G KPN V YT  
Sbjct: 443 ---------------VPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTL 487

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           + G    G+  EA  ++   +++   P+ + Y+ V+ GL +  K+ EA D + EM+++G 
Sbjct: 488 IKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGL 547

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P       LI   C+ G+M  A ++ +E L  G A N V  T+LI G+C++G   EA S
Sbjct: 548 KPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATS 607

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           +   M      PD  TY+ +I  L +NG+++ A EL+ + L KGLVP V TY ++I  +C
Sbjct: 608 IFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFC 667

Query: 561 QVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           + G +    +L E M  K        YN +I  LC  G +E A ++   +       +A 
Sbjct: 668 KQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAV 727

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           T   +++ Y   G    A+++   M  + + PD  +   + +    EG +E+A +L L  
Sbjct: 728 TYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLES 787

Query: 679 VERGHIQPKS 688
           V++G     S
Sbjct: 788 VQKGFASTSS 797



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 165/595 (27%), Positives = 268/595 (45%), Gaps = 51/595 (8%)

Query: 106 LKPRQICAVLRSQA-DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           L P  + +V+  Q  D +  L FF W   Q  +      + ++  IL  ++L   A  V+
Sbjct: 65  LSPDVVHSVITKQVNDPKRLLDFFNWVQFQMGFSQKLQSFSILALILCNSRLFSRADSVV 124

Query: 165 R---LMARRGIE---------C------------------RPEAFSYLMVAYSRAGKLRN 194
               +M+  G           C                  R   F  L+  Y + G    
Sbjct: 125 NQMIMMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNNNDRGVVFELLIDGYKKKGLFDE 184

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+      ++      LL CN  +  L+  NKL    RF   M  A +  +V TY  LI 
Sbjct: 185 AVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLIN 244

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK---EVRDLMEK--MVN 309
            +      K+  +L+ EM  KGCSP  V+Y  V+G LC+   +    E++ LM+K  +V 
Sbjct: 245 AHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVA 304

Query: 310 DS-------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
           D        + F  Q R  EAK ++ +M   G  P  V YTA+++GF R G+  +A ++ 
Sbjct: 305 DVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVK 364

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           ++M   G K N  +Y A + G+C  G   +A  ++N        P+  TY+ ++ G  +E
Sbjct: 365 EEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKE 424

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
              S   D++ EM K    PT     ++I  LCR G ++ A +  +  ++ G   N V +
Sbjct: 425 QNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIY 484

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           T+LI+G  Q+G  +EA+ +L  M      PD + Y ++I  L K+ ++EEA + +++M+ 
Sbjct: 485 TTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIE 544

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV-----IENLCSFGY 597
           +GL P V TY  +IH YC+ G ++   +  ++ML    C  A N V     I+  C  G 
Sbjct: 545 RGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLG---CGIAPNDVVCTALIDGYCKEGS 601

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
             EA  I   +L  +   D  T   L+   L  G    A ++      + L+PD+
Sbjct: 602 TTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDV 656



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 154/569 (27%), Positives = 261/569 (45%), Gaps = 66/569 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++   K K C  AK +L  M  +G++    A++ L+  + R G    A  V 
Sbjct: 305 DVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVK 364

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC-- 257
             M    V  NL   N  +  +     + KA   L  M + GI P+  TYN +I+GY   
Sbjct: 365 EEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKE 424

Query: 258 -DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DS 311
            +  R+KD   L+ EM      P   +   ++  LC+   I++   + E MV+     ++
Sbjct: 425 QNTSRVKD---LLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNA 481

Query: 312 NLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
            ++         +GR +EA  ++  M + G  PDV+ Y +V+ G C+  ++++AK  L +
Sbjct: 482 VIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVE 541

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEA----REMINTSEEEWWTPNAITYSVVMHGLR 420
           M   G KPN  +Y A ++G C +G+   A    +EM+         PN +  + ++ G  
Sbjct: 542 MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCG----IAPNDVVCTALIDGYC 597

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +EG  +EA  + R M+ +   P     + LI  L R GK+ GA + + E L KG   +V 
Sbjct: 598 KEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVF 657

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKK--DPDTVTYTTIIDALSKNGRVEEATELMM 538
            + S+I GFC++G + +A  L +  Y+C+K   P+ +TY  +I+ L K G +E A EL  
Sbjct: 658 TYNSIISGFCKQGGIGKAFQLHE--YMCQKGISPNIITYNALINGLCKAGEIERARELFD 715

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-------------QKCR--- 582
            +  KGL    VTY T+I  YC+ G +    +L ++M  K               CR   
Sbjct: 716 GIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEG 775

Query: 583 --------------------TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
                               ++ N +++  C  G + EA ++L  ++    K D  T  +
Sbjct: 776 NTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTI 835

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           L++ +   G    A +    M  RNL+P+
Sbjct: 836 LIDYHCKTGFLKEAEQFFVDMQKRNLMPN 864



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 242/516 (46%), Gaps = 30/516 (5%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
            D + Y  ++  L K++  + AK  L  M  RG+  +P  ++Y  L+  Y ++G+++ A  
Sbjct: 515  DVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGL--KPNVYTYGALIHGYCKSGEMQVADR 572

Query: 198  VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
                M    +APN ++C   I          +A      M    + P+V TY+ LI G  
Sbjct: 573  YFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLL 632

Query: 258  DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               +++ A++L+ E   KG  PD  +Y +++   CK                       Q
Sbjct: 633  RNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCK-----------------------Q 669

Query: 318  GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            G I +A +L   M Q G  P+++TY A++NG C+ GE+++A+++   +   G   N V+Y
Sbjct: 670  GGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTY 729

Query: 378  TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
               ++G C +G   +A  + +    +   P++  YS ++ G R+EG   +A  +  E V+
Sbjct: 730  ATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ 789

Query: 438  KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            KGF  T   +N L+   C+ GK+  A + +++ ++K    + V +T LI   C+ G L+E
Sbjct: 790  KGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKE 848

Query: 498  ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
            A     DM      P+ +TYT ++   +  GR  E   L  +M++K + P  VT+  +I 
Sbjct: 849  AEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMID 908

Query: 558  RYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
             + + G     LKL++ ML K     +   + +I+ LC   ++ E  K+L K+       
Sbjct: 909  AHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNL 968

Query: 616  DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              +TC  LV  +   G    A +V   M     +PD
Sbjct: 969  SLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPD 1004



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 190/427 (44%), Gaps = 46/427 (10%)

Query: 160  AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
            A  + R M  R +      +S L+    R GKL+ AM +LS   +  + P++   N+ I 
Sbjct: 605  ATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIIS 664

Query: 220  VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                   + KA +  E M   GI+PN++TYN LI G C    I+ A +L D +P KG + 
Sbjct: 665  GFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAH 724

Query: 280  DKVSYYTVMGYLCKEKRIKEVRDLMEKMV------------------------------- 308
            + V+Y T++   CK   + +   L ++M                                
Sbjct: 725  NAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLF 784

Query: 309  ---------NDSNL------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
                     + S+L      F   G++ EA +L+  M      PD VTYT +++  C+ G
Sbjct: 785  LESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTG 844

Query: 354  ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
             L +A++    M      PN ++YTA L+G    G+  E   + +    +   P+ +T+S
Sbjct: 845  FLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWS 904

Query: 414  VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            V++    +EG   +   +V +M+KKG   +    ++LI  LCR+  +    K +++   +
Sbjct: 905  VMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQ 964

Query: 474  GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
            G  +++   ++L+R F + G ++ A  +L  M   K  PD+     +I+    +   E A
Sbjct: 965  GLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENA 1024

Query: 534  TELMMKM 540
             + + +M
Sbjct: 1025 GDFLKQM 1031



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 128/317 (40%), Gaps = 38/317 (11%)

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
            + + +++ G +++G   EA        + GF    +  N L+  L +  K++   +F  
Sbjct: 166 GVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYN 225

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
             L      +V  +T LI    + G+ +E   LL +M      P  VTY  +I  L + G
Sbjct: 226 GMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAG 285

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-----QKCRT 583
            V+EA EL   M  KGLV  V TY  +I  + +  R  +   +LE+M SK         T
Sbjct: 286 EVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345

Query: 584 A--------------------------------YNQVIENLCSFGYLEEAGKILGKVLRT 611
           A                                YN +++ +C FG +E+A  +L +++  
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMV 405

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
             K D  T + ++E YL +        +   M   NL+P    C  +   L   G  E+A
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDA 465

Query: 672 DTLMLRFVERGHIQPKS 688
             +    V  G ++P +
Sbjct: 466 SRVFEIMVSLG-VKPNA 481


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 263/537 (48%), Gaps = 19/537 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+LR +  RG      A+  ++      G   +A  +   M    V PNL   N  +H
Sbjct: 140 ALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLH 195

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L     + +A   L ++   G++ N+ TYN  I+G C+  R+ +A++L+D M      P
Sbjct: 196 ALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-P 254

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKELV 327
           D V+Y T++  LCK+   +E    + +M+N   L  D               ++EA EL+
Sbjct: 255 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 314

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
                 G +PD VTY +++NG C  G++++A ++  +    G KP+ V Y + + GLC  
Sbjct: 315 KDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 374

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G  L A +++N   EE   P+  TY++V++GL + G +S+A  V+ + + KG+ P     
Sbjct: 375 GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF 434

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N LI   C+  K+D A + ++     G A + + + S++ G C+ G + E      +M L
Sbjct: 435 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 494

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ +TY  +I+   ++ ++EEA+++++KM  +GL P  V++ T+I+ +C+ G +E 
Sbjct: 495 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 554

Query: 568 LLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
              L +K+  K    TA  +N +I        +  A KI  ++L    +AD+ T  VL++
Sbjct: 555 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 614

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                     AY     M  +  IP +    +V   L +  +  +A  ++   V+ G
Sbjct: 615 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 671



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 230/475 (48%), Gaps = 41/475 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  ++  L K  + Q A   LR M  +G  C P+ F+Y  ++  Y +   ++ A  
Sbjct: 255 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG--CLPDDFTYNTIIDGYCKISMVQEATE 312

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L         P+ +   + I+ L     + +AL      Q  GI P+++ YN L+KG C
Sbjct: 313 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 372

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               I  A+++++EM  +GC PD  +Y  V+  LCK                        
Sbjct: 373 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK-----------------------M 409

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G I +A  ++N     G +PDV T+  +++G+C+  +LD A +++++M+ +G  P+T++Y
Sbjct: 410 GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITY 469

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
            + LNGLC  GK  E  E       +   PN ITY++++    R  K+ EA  V+ +M +
Sbjct: 470 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ 529

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P  V  N LI   CR G ++GA    Q+   KG +     F +LI  F  K ++  
Sbjct: 530 EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 589

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI- 556
           A  + D+M       D+ TY  +ID   K   V+ A   +++M+ KG +P++ T+  VI 
Sbjct: 590 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 649

Query: 557 -----HRYCQ-VGRVEDLLKL------LEKMLSKQKCRTAYNQV-IENLCSFGYL 598
                HR  Q VG +  ++K+      ++ +L+  K   A  ++ +E+L   G++
Sbjct: 650 SLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHI 704



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 236/492 (47%), Gaps = 46/492 (9%)

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
           AY+RAG+LR+A+     M   A  P     N  +  LV      +A +   RM  AG++P
Sbjct: 60  AYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSP 119

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG----CS---------------------- 278
           ++ T+   ++ +C   R   A++L+  +P +G    C+                      
Sbjct: 120 DLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQML 179

Query: 279 -----PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH---------DQGRIE 321
                P+  ++  V+  LCK   + E   L+ K++      NLF          + GR+ 
Sbjct: 180 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLP 239

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA  LV+ M     +PDVVTY  ++ G C+     +A   L++M + GC P+  +Y   +
Sbjct: 240 EAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 298

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G C      EA E++  +  + + P+ +TY  +++GL  EG +  A ++  E   KG  
Sbjct: 299 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 358

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N L++ LC +G +  A + M E   +GC  ++  +  +I G C+ G++ +A  +
Sbjct: 359 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 418

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           ++D  +    PD  T+ T+ID   K  +++ A +L+ +M   G+ P  +TY +V++  C+
Sbjct: 419 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 478

Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G+V ++ +  ++M+ K        YN +IEN C    +EEA K++ K+ +     DA +
Sbjct: 479 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 538

Query: 620 CHVLVESYLNKG 631
            + L+  +   G
Sbjct: 539 FNTLIYGFCRNG 550



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 201/467 (43%), Gaps = 25/467 (5%)

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
           R+  A I P    Y   I+ Y    R++DA+   + M L  C P   +Y  +M  L    
Sbjct: 44  RLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAA 100

Query: 296 RIKEVRDLMEKMVND--SNLFHDQ----------GRIEEAKELVNQMSQMGCIPDVVTYT 343
              +   +  +M+    S   H             R   A  L+  +   G     V Y 
Sbjct: 101 YHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYC 156

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            VV G    G    A+++  QM H    PN  ++   L+ LC  G  LEA  ++    + 
Sbjct: 157 TVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR 216

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
             + N  TY++ + GL   G+L EA  +V  M +    P  V  N LI+ LC++     A
Sbjct: 217 GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEA 275

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
             +++  +N+GC  +   + ++I G+C+   ++EA  LL D       PD VTY ++I+ 
Sbjct: 276 MHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 335

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
           L   G VE A EL  +  +KG+ P +V Y +++   C  G +   L+++ +M +++ C  
Sbjct: 336 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM-AEEGCHP 394

Query: 584 ---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               YN VI  LC  G + +A  ++   +      D  T + L++ Y  +     A ++ 
Sbjct: 395 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 454

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG-HIQP 686
            RM+   + PD      V   L   GK  E +      + +G H  P
Sbjct: 455 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 501



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/309 (19%), Positives = 128/309 (41%), Gaps = 27/309 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y  D   +  +++   K      A +++  M   GI      ++ ++    +AGK+    
Sbjct: 427 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 486

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
                M      PN +  N  I      NK+ +A + + +M   G+ P+ +++N LI G+
Sbjct: 487 ETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGF 546

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C    ++ A  L  ++  KG S    ++ T++G                        F  
Sbjct: 547 CRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG-----------------------AFSG 583

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +  +  A+++ ++M   G   D  TY  +++G C+   +D+A   L +M   G  P+  +
Sbjct: 584 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMST 643

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           +   +N L  N +  +A  +I+   +    P  +    +++  ++E  ++    +V +++
Sbjct: 644 FGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNADKKE--IAAPKILVEDLM 699

Query: 437 KKGFFPTPV 445
           KKG    P 
Sbjct: 700 KKGHISYPT 708


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 160/603 (26%), Positives = 277/603 (45%), Gaps = 68/603 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D   Y ++L  L      Q A  +L +MA  G +C P+  SY  V   + + G L     
Sbjct: 50  DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYS 109

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
             + M    ++PN++  N+ I  L     + KA+  L  M  +G+ P+ +TYN ++ G+C
Sbjct: 110 TYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 169

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              + K+AI  + +M   G  PD V+Y ++M YLCK                        
Sbjct: 170 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK-----------------------N 206

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR  EA+++ + M++ G  P++ TY  ++ G+   G L +   +L  M  +G  PN   +
Sbjct: 207 GRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 266

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +  +       K  EA  + +   ++   PNA+TY  V+  L + G++ +A     +M+ 
Sbjct: 267 SILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 326

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P  +  N LI  LC   K + A++ + E L++G  +N + F S+I   C++G + E
Sbjct: 327 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 386

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           +  L D M      PD +TY+T+ID     G+++EAT+L+  M+S G+ P  VTY T+I+
Sbjct: 387 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLIN 446

Query: 558 RYCQVGRVEDLLKLLEKMLSK-----------------QKCRTA---------------- 584
            YC++ R++D L L  +M S                  Q  RTA                
Sbjct: 447 GYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQL 506

Query: 585 ----YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               YN ++  LC     ++A ++   +     K +A T ++++++ L  G    A  + 
Sbjct: 507 ELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 566

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF------VERGHIQPKSEEHLQR 694
               +  L+P+    + ++E +I +G  EE D L L        V+ G +     E LQR
Sbjct: 567 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 626

Query: 695 QRV 697
             +
Sbjct: 627 GEI 629



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/489 (23%), Positives = 224/489 (45%), Gaps = 27/489 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K   C  A+++   M +RG++     +  L+  Y+  G L     +L
Sbjct: 192 DVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 251

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +  + PN  + +  +       K+ +A+    +M+  G+ PN +TY  +I   C  
Sbjct: 252 DLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 311

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R++DA+   ++M  +G SP  + Y +++  LC                          +
Sbjct: 312 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT-----------------------CNK 348

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            E A+EL+ +M   G   + + + ++++  C+ G + +++K+   M   G KP+ ++Y+ 
Sbjct: 349 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 408

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G C  GK  EA +++ +       P+ +TYS +++G  +  ++ +A  + REM   G
Sbjct: 409 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSG 468

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  +  N+++Q L +  +   AK+        G  + +  +  ++ G C+    ++AL
Sbjct: 469 VSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDAL 528

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +  ++ L     +  T+  +IDAL K GR +EA +L +   S GLVP   TYR +    
Sbjct: 529 RMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 588

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
              G +E+L +L   M     C       N ++  L   G +  AG  L  +       +
Sbjct: 589 IGQGLLEELDQLFLSM-EDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 647

Query: 617 ASTCHVLVE 625
           AST  + ++
Sbjct: 648 ASTASLFID 656



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 180/401 (44%), Gaps = 40/401 (9%)

Query: 321 EEAKELVNQMSQMGCIPDVVTY-------------------------------------T 343
           E+A+ + +++ + G IPDV +Y                                     +
Sbjct: 34  EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            V+NGF + G+LD+      +M      PN V+Y + +  LC      +A E++ T  + 
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+ +TY+ ++HG    G+  EA   +++M   G  P  V  N L+  LC+ G+   A
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           +K       +G    +  + +L++G+  KG L E   LLD M      P+   ++ ++ A
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKC 581
            +K  +VEEA  +  KM  +GL P  VTY  VI   C+ GRVED +   E+M+ +     
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              YN +I  LC+    E A +++ ++L      +    + +++S+  +G  + + K+  
Sbjct: 333 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 392

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            M    + PD+     + +   L GK +EA  L+   V  G
Sbjct: 393 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 433



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/425 (21%), Positives = 176/425 (41%), Gaps = 32/425 (7%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           +CA  + +  E   L F     RQ     + + Y  ++ IL K+   + A      M   
Sbjct: 270 VCAYAKQEKVEEAMLVFSKM--RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 327

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G+      ++ L+       K   A  ++  M    +  N +  N+ I       ++ ++
Sbjct: 328 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 387

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
            +  + M   G+ P+++TY+ LI GYC   ++ +A KL+  M   G  PD V+Y T++  
Sbjct: 388 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLING 447

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            CK  R+K                       +A  L  +M   G  PD++TY  ++ G  
Sbjct: 448 YCKISRMK-----------------------DALVLFREMESSGVSPDIITYNIILQGLF 484

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +      AK++   +   G +    +Y   L+GLC N  + +A  M            A 
Sbjct: 485 QTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEAR 544

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           T+++++  L + G+  EA D+       G  P      L+ +++  +G ++   +     
Sbjct: 545 TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 604

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEA---LSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            + GC V+      ++R   Q+G++  A   LS++D+ +      +  T +  ID LS  
Sbjct: 605 EDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF---SLEASTASLFIDLLS-G 660

Query: 528 GRVEE 532
           G+ +E
Sbjct: 661 GKYQE 665


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 151/522 (28%), Positives = 252/522 (48%), Gaps = 57/522 (10%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A     LM R        +F+ L+   ++         + + M+ A ++P+L   +   +
Sbjct: 75  AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L   N++++AL  +  +   G  PNV+TY  LIKG C  HRI +A +L   M   GC+P
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ------------------GRIE 321
           + V+Y T++  LC+   +     L ++M+ND++ +                     GR +
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EAKEL  +M   G IPDV++Y+ +++GFC  G+ DQ+K +  +M   G +P+ V+++  +
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLI 314

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           + LC  GK  EA++++    +    PN ITY+ ++ G    G L+ A ++   M  KG  
Sbjct: 315 DTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLE 374

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  +    LI   C+  K+  A     E L  G + NV  + +L++G  QKG + +A  L
Sbjct: 375 PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKL 434

Query: 502 LDDMY-----------------LCKKD------------------PDTVTYTTIIDALSK 526
              M                  LCK D                   +   Y+ +ID L K
Sbjct: 435 FGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCK 494

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--- 583
            G++E A EL  K+  +GL P VVTY  +IH +C+VG+V++   L EKM  +  C     
Sbjct: 495 AGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKM-EENGCTPDII 553

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           AYN ++   C    LEE  K+L K+++     +A++C ++V+
Sbjct: 554 AYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVD 595



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 229/481 (47%), Gaps = 21/481 (4%)

Query: 223 VGNKLA-KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
            GN  A +A  F + M  +   P + ++N L+ G   ++       L +EM L G SPD 
Sbjct: 67  TGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDL 126

Query: 282 VSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSNLFHD---QGRIEEAKELVNQ 329
            +   +   LC   R+ E          R  +  +V  + L      + RI EA  L  +
Sbjct: 127 FTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLR 186

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM------YHHGCKPNTVSYTAFLNG 383
           M ++GC P+ VTY  ++ G C+ G ++ A K+ ++M      Y   CKP  ++Y+  ++G
Sbjct: 187 MQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDG 246

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           LC  G+  EA+E+    + +   P+ I+YS ++HG    GK  ++  +  EMV +G  P 
Sbjct: 247 LCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPD 306

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V  ++LI +LC+EGK+  AKK ++  + +G   N++ + SLI GFC  GDL  A  L  
Sbjct: 307 MVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFL 366

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
            M     +PD ++YTT+I+   K  +V+EA  L  +ML  G  P V TY T++    Q G
Sbjct: 367 SMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKG 426

Query: 564 RVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           +V D  KL   M +      +  Y   ++ LC    L EA ++  ++     K +     
Sbjct: 427 KVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYS 486

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
            L++     G    A+++  ++    L PD+     +       G+ + A+ L  +  E 
Sbjct: 487 CLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEEN 546

Query: 682 G 682
           G
Sbjct: 547 G 547



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 244/530 (46%), Gaps = 61/530 (11%)

Query: 123 VALQFFYWADRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
            A+Q F++ D   R    P +  +  +L  L+K         +   M   G+   P+ F+
Sbjct: 71  TAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLS--PDLFT 128

Query: 181 YLMVA--YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
             ++A       ++  A+  ++ + +    PN++   T I  L + +++++A R   RMQ
Sbjct: 129 LSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQ 188

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG------CSPDKVSYYTVMGYLC 292
             G TPN +TY  LIKG C    +  A+KL  EM          C P  ++Y  ++  LC
Sbjct: 189 KLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLC 248

Query: 293 KEKRIKEVRDLMEKM---------VNDSNLFHD--------------------------- 316
           K  R  E ++L E+M         ++ S L H                            
Sbjct: 249 KVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMV 308

Query: 317 -----------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                      +G++ EAK+L+  M Q G +P+++TY ++++GFC VG+L+ A+++   M
Sbjct: 309 TFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSM 368

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G +P+ +SYT  +NG C   K  EA  + N   +   +PN  TY  ++ GL ++GK+
Sbjct: 369 PSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKV 428

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A  +   M   G         + +  LC+   +  A +   E  +    +N+ N++ L
Sbjct: 429 GDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCL 488

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G C+ G LE A  L + +      PD VTY  +I    K G+V+ A  L  KM   G 
Sbjct: 489 IDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGC 548

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN--QVIENLC 593
            P ++ Y T++  +C+  ++E+++KLL KM+ K     A +   V++ LC
Sbjct: 549 TPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLC 598



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 197/399 (49%), Gaps = 23/399 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y ++++ L K      AK +   M  +G+     ++S L+  +  AGK   + ++   
Sbjct: 238 ITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDE 297

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    V P+++  +  I  L    K+ +A + LE M   GI PN++TYN LI G+C +  
Sbjct: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 357

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +  A +L   MP KG  PD++SY T++   CK  ++KE                      
Sbjct: 358 LNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKE---------------------- 395

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A  L N+M Q+G  P+V TY  ++ G  + G++  AKK+   M  +G   N+  Y  FL
Sbjct: 396 -AMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +GLC N    EA E+ N  +   +  N   YS ++ GL + GKL  A ++  ++ ++G  
Sbjct: 455 DGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQ 514

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N++I   C+ G++D A    ++    GC  +++ + +L+ GFC+   LEE + L
Sbjct: 515 PDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKL 574

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
           L  M      P+  + T ++D L K+ + ++  +L+ K 
Sbjct: 575 LHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKF 613



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 212/459 (46%), Gaps = 22/459 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y  + + Y  +++ L        A R+   M + G  C P A +Y  L+    + G +  
Sbjct: 157 YIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLG--CTPNAVTYGTLIKGLCQTGNVNI 214

Query: 195 AMYVLSMMQKAA------VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           A+ +   M   A        P ++  +  I  L    +  +A    E M+  G+ P+V++
Sbjct: 215 ALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVIS 274

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           Y+ LI G+C   +   +  L DEM  +G  PD V++  ++  LCKE ++ E + L+E M+
Sbjct: 275 YSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMI 334

Query: 309 NDS---NL---------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                 NL         F   G +  A+EL   M   G  PD ++YT ++NG+C+  ++ 
Sbjct: 335 QRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVK 394

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A  +  +M   G  PN  +Y   L GL   GK  +A+++    +    + N+  Y + +
Sbjct: 395 EAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            GL +   L EA ++  E+    F       + LI  LC+ GK++ A +  ++   +G  
Sbjct: 455 DGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQ 514

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            +VV +  +I GFC+ G ++ A  L + M      PD + Y T++    +  ++EE  +L
Sbjct: 515 PDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKL 574

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           + KM+ K + P   +   V+   C+  + +  + LL K 
Sbjct: 575 LHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKF 613



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 24/143 (16%), Positives = 69/143 (48%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           + + ++ +   Y  +++ L K    + A  +   +++ G++     ++ ++  + + G++
Sbjct: 474 KSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQV 533

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            NA  +   M++    P+++  NT +     GNKL + ++ L +M    ++PN  +   +
Sbjct: 534 DNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIV 593

Query: 253 IKGYCDLHRIKDAIKLIDEMPLK 275
           +   C   + K  + L+ + P++
Sbjct: 594 VDMLCKDEKYKKFVDLLPKFPVQ 616


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 164/597 (27%), Positives = 273/597 (45%), Gaps = 70/597 (11%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEIL-----SKTKLCQGAKRVLRLMARRGIECRPEA 178
           AL   + A+R   +    + Y  +L+ L     S  +    A+RV R M R G+      
Sbjct: 151 ALTLLHLANRHG-FAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYT 209

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ ++      G L   +  +  M+K  ++PN++  NT I       K+ +A+  L  M 
Sbjct: 210 YNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMA 269

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
           + G+  N+++YN +I G C   R+ +  +L++EM  KG  PD+V+Y T++   CKE  + 
Sbjct: 270 VGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLH 329

Query: 299 EVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           +   L+ +MV               N     G +  A E+ +QM   G  P+  TYT ++
Sbjct: 330 QGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLI 389

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +GFC+ G +++A K+L +M   G  P+ V+Y A ++G C  G+  EA  ++    E    
Sbjct: 390 DGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLP 449

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ ++YS V+ G  RE +L +A  +  EMV+KG  P  V  + LIQ LC + K+  A   
Sbjct: 450 PDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDL 509

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +E + +G   + V +TSLI  +C  G+L +AL L D+M      PD VTY+ +I+ L+K
Sbjct: 510 FREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNK 569

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHR---------------YCQVGRVEDLLKL 571
             R + A  L++K+  +  VP  VTY T+I                 +C  G + +  ++
Sbjct: 570 KARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRV 629

Query: 572 LEKMLSKQ-------------------KCRTAYN------------------QVIENLCS 594
            + ML +                        AYN                   +++ L  
Sbjct: 630 FKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAR 689

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            G  +E  ++L  +LR+    DA    VLVE    +G       V   M    L+PD
Sbjct: 690 EGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 151/512 (29%), Positives = 252/512 (49%), Gaps = 45/512 (8%)

Query: 135 WRYRHDPI-----------VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           +R+ HD             V+ ++++ LS+      A  +L L  R G    P   SY  
Sbjct: 115 FRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFA--PTVLSYNA 172

Query: 184 V-------AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           V       + S      +A  V   M +  V+PN+   N  I  +V    L K L F+ +
Sbjct: 173 VLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRK 232

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M+  GI+PNV+TYN LI   C   ++K+A+ L+  M + G + + +SY +V+  LC    
Sbjct: 233 MEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLC---- 288

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                               +GR+ E  ELV +M   G +PD VTY  +VNGFC+ G L 
Sbjct: 289 -------------------GKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLH 329

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           Q   +L +M   G  PN V+YT  +N +C  G    A E+ +        PN  TY+ ++
Sbjct: 330 QGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLI 389

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            G  ++G ++EA  V+ EM+  GF P+ V  N L+   C  G++  A   ++  + +G  
Sbjct: 390 DGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLP 449

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            +VV+++++I GFC++ +L +A  + ++M      PDTVTY+++I  L    ++ EA +L
Sbjct: 450 PDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDL 509

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCS 594
             +M+ +GL P  VTY ++I+ YC  G +   L+L ++M+ +        Y+ +I  L  
Sbjct: 510 FREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNK 569

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVES 626
               + A ++L K+    S  D  T + L+E+
Sbjct: 570 KARTKVAKRLLLKLFYEESVPDDVTYNTLIEN 601


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 251/470 (53%), Gaps = 29/470 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           I Y ++++ L K +    A+ + + M  +GI   P+  SY  L+  +  +GK   A  + 
Sbjct: 303 ISYSIIIDGLCKDRREDEARELFKEMKAQGI--MPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M    + P++   +  I +L    K+ +A + LE +   G  P+V+T   L+KG C  
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMK 420

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           HRI  A +L  +M   GC P+ V+  T+M  LC+   IK   +L + M++D++ +     
Sbjct: 421 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYG---- 476

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                        + C P+ ++Y+ +++G C+ G  D+A+++ ++M   G  P+ +SYT+
Sbjct: 477 -------------INCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTS 523

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G C +GK  +A+ + N   +    P+  T+SV++  L +EGK+ EA +++  M+++G
Sbjct: 524 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 583

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  V    L++ LC   ++  A +   +    GC  +VV + +L++G CQ G+++ AL
Sbjct: 584 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 643

Query: 500 SLLDDM------YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            L   M      Y     PD ++Y+ IID L K+GR +EA EL  +M + G++P V++Y 
Sbjct: 644 ELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYT 703

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEA 601
           ++IH +C+ G++ED   L  +M+ +  Q     Y+ +I   C  G +++A
Sbjct: 704 SLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 163/622 (26%), Positives = 292/622 (46%), Gaps = 77/622 (12%)

Query: 134 QWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRA 189
           Q+  +  P  + Y ++++ L K +    A+ + + M  +G+   P+  SY  L+  + R+
Sbjct: 112 QYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGM--MPDVISYTSLIHGFCRS 169

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GK   A  + + M    +  ++   +  I +L    K+ +A   LE M   G   +++TY
Sbjct: 170 GKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTY 229

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           + LIKG C  HRI +A +L   M   GC PD ++Y T+M  LC+   I     L ++M+N
Sbjct: 230 STLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLN 289

Query: 310 DS-------------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           D+                    L  D+ R +EA+EL  +M   G +PDV++YT +++GFC
Sbjct: 290 DTGRYGIKCKPTLISYSIIIDGLCKDR-REDEARELFKEMKAQGIMPDVISYTTLIHGFC 348

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
             G+ ++AK +  +M   G +P+  + +  ++ LC  GK +EA +++    +    P+ +
Sbjct: 349 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVV 408

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFP---------------------------- 442
           T + ++ GL  + ++S+A  +  +M K G  P                            
Sbjct: 409 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 468

Query: 443 ----TPVEIN---------LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
               +P  IN         ++I  LC+ G+ D A++  +E    G   +V+++TSLI GF
Sbjct: 469 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 528

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ G  ++A  L ++M      PD  T++ +ID L K G+V EA EL+  M+ +G +P  
Sbjct: 529 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 588

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILG 606
           VTY T++   C   R+ +  +L  KM  K  C      Y  +++ LC  G ++ A ++  
Sbjct: 589 VTYTTLVKGLCMNDRISEATQLFMKM-QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHK 647

Query: 607 KVLR------TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           K+L       T  K D  +  ++++     G    A ++   M    +IP++     +  
Sbjct: 648 KMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIH 707

Query: 661 RLILEGKSEEADTLMLRFVERG 682
                GK E+A  L    V++G
Sbjct: 708 GFCRSGKLEDAKHLFNEMVDQG 729



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 261/551 (47%), Gaps = 34/551 (6%)

Query: 166 LMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAA------VAPNLLICNTA 217
            M+ + + CRP+A +Y  LM    + GK+  A+++   M            P L+  +  
Sbjct: 68  FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSII 127

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I  L    +  +A    + M+  G+ P+V++Y  LI G+C   + + A  L +EM   G 
Sbjct: 128 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGI 187

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKE 325
             D  +   ++  LCKE ++ E  +L+E M         V  S L      + RI EA  
Sbjct: 188 RSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATR 247

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM------YHHGCKPNTVSYTA 379
           L   M ++GC PD + Y  ++ G C+ G ++ A ++ Q+M      Y   CKP  +SY+ 
Sbjct: 248 LFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSI 307

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++GLC + +  EARE+    + +   P+ I+Y+ ++HG    GK  +A  +  EM+  G
Sbjct: 308 IIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 367

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     ++LI  LC++GK+  A K ++  + +GC  +VV  T+L++G C K  + +A 
Sbjct: 368 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKAT 427

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK------GLVPTVVTYR 553
            L   M      P+ VT  T++  L ++G ++ A EL   MLS          P  ++Y 
Sbjct: 428 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 487

Query: 554 TVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            +I   C+ GR ++  +L ++M  L       +Y  +I   C  G  ++A  +  +++  
Sbjct: 488 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI 547

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
             + D +T  VL++    +G  + A ++   M  R  IP+      + + L +  +  EA
Sbjct: 548 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 607

Query: 672 DTLMLRFVERG 682
             L ++  + G
Sbjct: 608 TQLFMKMQKLG 618



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 156/561 (27%), Positives = 266/561 (47%), Gaps = 40/561 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +L +M +RG       +S L+       ++  A  +   M+K    P+ +   T + 
Sbjct: 29  ANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMK 88

Query: 220 VLVVGNKLAKALRFLERM----QLAGI--TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
            L    K+  AL   + M       GI   P +++Y+ +I G C   R  +A +L  EM 
Sbjct: 89  GLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMK 148

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDSNLFHD----QGRIE 321
            +G  PD +SY +++   C+  + ++ + L  +M        V  S++  D    +G++ 
Sbjct: 149 AQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVI 208

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA EL+  M Q GCI D+VTY+ ++ G C    + +A ++   M   GC+P+ ++Y   +
Sbjct: 209 EANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLM 268

Query: 382 NGLCHNGKSLEA----REMINTSEEEW--WTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            GLC  G    A    +EM+N +        P  I+YS+++ GL ++ +  EA ++ +EM
Sbjct: 269 KGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEM 328

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
             +G  P  +    LI   C  GK + AK    E L+ G   +V   + LI   C+KG +
Sbjct: 329 KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKV 388

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            EA  LL+ +      PD VT TT++  L    R+ +AT+L +KM   G +P VVT  T+
Sbjct: 389 IEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATL 448

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQK-----CR---TAYNQVIENLCSFGYLEEAGKILGK 607
           +   CQ G ++  L+L + MLS        C+    +Y+ +I+ LC  G  +EA ++  +
Sbjct: 449 MKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKE 508

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR----NLIPDLKLCKKVSERLI 663
           +       D  +   L+  +   G     +K A  +FN      + PD+     + + L 
Sbjct: 509 MKALGVIPDVISYTSLIHGFCRSG----KWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLC 564

Query: 664 LEGKSEEADTLMLRFVERGHI 684
            EGK  EA+ L+   ++RG I
Sbjct: 565 KEGKVIEANELLEVMIQRGCI 585



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 227/457 (49%), Gaps = 37/457 (8%)

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
            GI P+V T   LI  +C   ++ +A +L++ M  +GC  D V+Y T++  LC + RI  
Sbjct: 4   VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRI-- 61

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                                 EA +L   M ++GC PD + Y  ++ G C+ G+++ A 
Sbjct: 62  ---------------------SEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIAL 100

Query: 360 KMLQQM------YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            + Q+M      Y   CKP  VSY+  ++GLC + +  EARE+    + +   P+ I+Y+
Sbjct: 101 HLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYT 160

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++HG  R GK  +A  +  EM+  G        ++LI  LC+EGK+  A + ++  + +
Sbjct: 161 SLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQR 220

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           GC +++V +++LI+G C K  + EA  L   M      PD + Y T++  L + G +  A
Sbjct: 221 GCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTA 280

Query: 534 TELMMKMLSK----GL--VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAY 585
            +L  +ML+     G+   PT+++Y  +I   C+  R ++  +L ++M ++       +Y
Sbjct: 281 LQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISY 340

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
             +I   C  G  E+A  +  ++L    + D +T  VL++    KG  + A K+   +  
Sbjct: 341 TTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQ 400

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           R  IPD+  C  + + L ++ +  +A  L L+  + G
Sbjct: 401 RGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 437



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 193/386 (50%), Gaps = 28/386 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS--YLMVAYSRAGKLRNAMY 197
           D     +++++L K      A ++L ++ +RG  C P+  +   L+       ++  A  
Sbjct: 371 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG--CIPDVVTCTTLVKGLCMKHRISKATQ 428

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM----QLAGIT--PNVLTYNC 251
           +   MQK    PN++ C T +  L     +  AL   + M       GI   PN ++Y+ 
Sbjct: 429 LFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSI 488

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-- 309
           +I G C   R  +A +L  EM   G  PD +SY +++   C+  + K+ + L  +MV+  
Sbjct: 489 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 548

Query: 310 ---DSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
              D   F         +G++ EA EL+  M Q GCIP+ VTYT +V G C    + +A 
Sbjct: 549 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEAT 608

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGK---SLEAREMINTSEEEWWT---PNAITYS 413
           ++  +M   GC P+ V+Y   + GLC  G    +LE  + + +   ++ T   P+ I+YS
Sbjct: 609 QLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYS 668

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           +++ GL + G+  EA ++ +EM   G  P  +    LI   CR GK++ AK    E +++
Sbjct: 669 IIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQ 728

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEAL 499
           G  +N V ++ +I GFC++G +++AL
Sbjct: 729 GVQLNAVTYSVMIHGFCKEGQIDKAL 754


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 171/654 (26%), Positives = 295/654 (45%), Gaps = 50/654 (7%)

Query: 76  PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQW 135
           P    V ++  + S+ + +   EL +L+  LKP  +  +L +  +    L+FF+W  R  
Sbjct: 46  PFPELVSKISIILSSPTWERSSELSHLIPKLKPHHVVNLLDTHNNTESVLRFFHWVSRTH 105

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA----------------- 178
            ++HD   +  ML  L + +L   A  V  LM +    CR E                  
Sbjct: 106 FFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIK---SCRNEGEVKRVIQVLSEINTTYD 162

Query: 179 FSYLMVAYS----RAGK-----LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           F Y + ++S    + GK     L   +Y+   M  + + PNL   N  I +L    K+ +
Sbjct: 163 FGYTLYSFSTLLIQLGKFDMDGLGRDVYI--EMLNSGIRPNLFTFNAMIKILCNKGKVQE 220

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A   +  +   G  P+  TY  LI G+C    +  A ++ D M   GC P+ V+Y  ++ 
Sbjct: 221 AELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALIN 280

Query: 290 YLCKEKRIKEVRDLMEKMVNDS--NLFH----------DQGRIEEAKELVNQMSQMGCIP 337
            LC E R++E  D++E+M++       H          D GR  EA +L+ +M + GC P
Sbjct: 281 GLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGP 340

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           +V TYTA+++G  R G+ + A  +  +M   G  P  V+Y+A +N L   G+   A  + 
Sbjct: 341 NVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIF 400

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
                    PN  TY+V++ G    G + +A  +  +M+K G  P  +  N++I    ++
Sbjct: 401 EWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQ 460

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G M+ A + ++     G  ++   + +LI GF + G LE A SL ++M      P+ VTY
Sbjct: 461 GYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTY 520

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
             II+      +V++A  L  KM+  G VP+  TY  +I  + +  R+ +      KM+ 
Sbjct: 521 NAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVK 580

Query: 578 KQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
           +        Y   I+ LC  G    A KI  ++ +     +  T   L++    +G    
Sbjct: 581 QGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEG---- 636

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
             + A R+ +    P++     +   L  +G+  EAD L+    ++G +QP  E
Sbjct: 637 QAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKG-LQPSEE 689



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 241/515 (46%), Gaps = 37/515 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAK-----RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
           +P V+   + I+S   LC   +     ++L  M +RG     + ++ L+   SR GK   
Sbjct: 304 EPTVHAYTIPIVS---LCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEV 360

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ V   M    + P  +  +  I+ L V  +   AL   E M      PN  TYN +IK
Sbjct: 361 AIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIK 420

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G+C +  I+ A  + D+M   G SP+ ++Y  ++                       +++
Sbjct: 421 GFCSIGYIQKATAIFDQMLKAGPSPNVITYNIII-----------------------HIY 457

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             QG +  A  L+  M   G   D  TY  +++GF R G+L+ A  +  +M  HG  PN 
Sbjct: 458 FKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNV 517

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y A +NG     K  +A  +     E    P++ TY++++ G  +  ++SEA +   +
Sbjct: 518 VTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGK 577

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MVK+G  P  +     I  LC+ G+   A K   E   +    N+  ++SLI G CQ+G 
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQ 637

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
            E+A  LLDD      +P+  TYTT++  L   GR  EA +L+  M  KGL P+   YR 
Sbjct: 638 AEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRA 693

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           ++   C+   VE  LK+ + M++   Q C + Y  +I  LC   + ++A  +   +L+  
Sbjct: 694 LLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKH 753

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
             +D     VL++  L +G   L+ ++   M +RN
Sbjct: 754 WNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRN 788



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 178/388 (45%), Gaps = 20/388 (5%)

Query: 134 QWRYRHDPI----VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           +W   HD +     Y ++++        Q A  +   M + G       ++ ++  Y + 
Sbjct: 401 EWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQ 460

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G + NAM +L MM+   +  +       I     G KL  A      M   GI+PNV+TY
Sbjct: 461 GYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTY 520

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N +I GY  + ++ DA+ L  +M   G  P   +Y  ++    K  RI E  +   KMV 
Sbjct: 521 NAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVK 580

Query: 310 DSNL--------FHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
              L        F D     GR   A ++ ++M +    P++ TY+++++G C+ G+ + 
Sbjct: 581 QGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAED 640

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A+++L      GC+PN  +YT  + GLC  G+  EA +++ + +++   P+   Y  ++ 
Sbjct: 641 AERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLV 696

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  +  ++  A  +   MV  GF P   +   LI +LC+      A+   Q  L K    
Sbjct: 697 GQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNS 756

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDM 505
           + V +T L+ G  ++G+ + +L LL  M
Sbjct: 757 DEVVWTVLLDGLLKEGETDLSLELLHVM 784



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 166/349 (47%), Gaps = 16/349 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y +++ I  K      A R+L +M   G++     ++ L+  +SR GKL +A  + + 
Sbjct: 448 ITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNE 507

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  ++PN++  N  I+  +   K+  AL    +M  +G  P+  TYN +I G+   +R
Sbjct: 508 MVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNR 567

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK---------EVRDLMEKMVNDSN 312
           I +A     +M  +G  P+ ++Y + +  LCK  R           + RD    +   S+
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSS 627

Query: 313 LFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L      +G+ E+A+ L++     GC P+V TYT +V G C  G   +A ++++ M   G
Sbjct: 628 LIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKG 683

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            +P+   Y A L G C N +   A ++ ++     + P    Y  ++  L +     +A 
Sbjct: 684 LQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQ 743

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
            + + M+KK +    V   +L+  L +EG+ D + + +    ++ C +N
Sbjct: 744 CMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLN 792


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 247/487 (50%), Gaps = 14/487 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  M+ +G    P  +  ++ A  R+G  RN++ VL  M       +   CN  ++
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLN 189

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            +     + +A+  L ++   G   ++++YN ++KG C   R  D  +L+DEM    C+P
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD-------QGRIEEAKELV 327
           + V++ T++GYLC+    + V +++ +M       D  ++         +G +E A E++
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           N+M   G  P+VV Y  V+ G C      +A+++L +M+   C  + V++   ++  C N
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G      E++         P+ ITY+ V++G  +EG + EA  +++ M   G  P  V  
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            ++++ LC  G+   A++ M + + +GC  N V F +LI   C+KG +E+A+ LL  M +
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD ++Y+T+ID L K G+ EEA EL+  M++KG+ P  + Y ++     + GRV  
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 568 LLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           ++++ + +   + +     YN VI +LC     + A      ++      + ST  +L++
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIK 609

Query: 626 SYLNKGI 632
              ++G+
Sbjct: 610 GLASEGL 616



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 223/454 (49%), Gaps = 29/454 (6%)

Query: 157 CQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
           C+  +          +   P A+++  V       G++ +A+ VL  M     AP   + 
Sbjct: 90  CRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMY 149

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           +  +           ++R LE M   G T +    N ++   C+   + +A+ L+ ++  
Sbjct: 150 HVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF 209

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
            GC  D VSY  V+  LC  KR  +V +LM++MV                       ++ 
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV-----------------------RVD 246

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C P++VT+  ++   CR G  ++  ++L QM  HGC P+   Y   ++G+C  G    A 
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E++N        PN + Y+ V+ GL    +  EA +++ EM +K      V  N+L+   
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G +D   + +++ L+ GC  +V+ +T++I GFC++G ++EA+ LL  M  C   P+T
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           V+YT ++  L   GR  +A ELM +M+ +G  P  VT+ T+I+  C+ G VE  ++LL++
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 575 MLSKQKCR---TAYNQVIENLCSFGYLEEAGKIL 605
           ML    C     +Y+ VI+ L   G  EEA ++L
Sbjct: 487 MLV-NGCSPDLISYSTVIDGLGKAGKTEEALELL 519



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 222/435 (51%), Gaps = 12/435 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +LR +A  G E    +++ ++     A +  +   ++  M +   APN++  NT I 
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L       +    L +M   G TP++  Y  +I G C    ++ A ++++ MP  G  P
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKP 319

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
           + V Y TV+  LC  +R KE  +L+ +M                + F   G ++   EL+
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            QM   GC+PDV+TYT V+NGFC+ G +D+A  +L+ M   GCKPNTVSYT  L GLC  
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G+ ++A E+++   ++   PN +T++ +++ L ++G + +A +++++M+  G  P  +  
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           + +I  L + GK + A + +   +NKG + N + ++S+     ++G + + + + D++  
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
                D V Y  +I +L K    + A +    M+S G +P   TY  +I      G  ++
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 568 LLKLLEKMLSKQKCR 582
             +LL ++ S+   R
Sbjct: 620 AQELLSELCSRGALR 634



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 216/441 (48%), Gaps = 16/441 (3%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + PN  T+  +++G C   RI DA++++DEM  KGC+P    Y+ ++   C+    +   
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 302 DLMEKM--------VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            ++E M          + NL      +QG ++EA  L+ +++  GC  D+V+Y AV+ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C        ++++ +M    C PN V++   +  LC NG      E++    E   TP+ 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
             Y+ ++ G+ +EG L  A +++  M   G  P  V  N +++ LC   +   A++ + E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              K C ++ V F  L+  FCQ G ++  + LL+ M      PD +TYTT+I+   K G 
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYN 586
           ++EA  L+  M S G  P  V+Y  V+   C  GR  D  +L+ +M+ +Q C      +N
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI-QQGCPPNPVTFN 465

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I  LC  G +E+A ++L ++L      D  +   +++     G    A ++   M N+
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525

Query: 647 NLIPDLKLCKKVSERLILEGK 667
            + P+  +   ++  L  EG+
Sbjct: 526 GISPNTIIYSSIACALSREGR 546



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 162/345 (46%), Gaps = 25/345 (7%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           +R   Y   P  + Y  +L+ L   +  + A+ +L  M ++        F+ L+  + + 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G +   + +L  M      P+++   T I+       + +A+  L+ M   G  PN ++Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             ++KG C   R  DA +L+ +M  +GC P+ V++ T++ +LCK                
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK---------------- 473

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                  +G +E+A EL+ QM   GC PD+++Y+ V++G  + G+ ++A ++L  M + G
Sbjct: 474 -------KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PNT+ Y++    L   G+  +  +M +  ++     +A+ Y+ V+  L +  +   A 
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           D    MV  G  P      +LI+ L  EG    A++ + E  ++G
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 266/528 (50%), Gaps = 37/528 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+LR +  RG + +P A+  ++      G   +A ++   M +  V P++   N  +H
Sbjct: 64  ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L     + ++   L ++   G++ N  T N  I+G C+  R+++A+ L++ M     +P
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAP 182

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D V+Y T+M  LCK+ +++E    + +M+N                        GCIPD 
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQ-----------------------GCIPDD 219

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            TY  +++G+C+   L +A ++L+     G  P+ V+Y + +NGLC  G    A E+ N 
Sbjct: 220 FTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNE 279

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
           ++ +   P+ + Y+ ++ GL R+G +  A  V+ EMV+ G  P     N++I  LC+ G 
Sbjct: 280 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGN 339

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +  A   M + + KG   +V  F ++I G+C++  L+ AL L++ M++    PD +TY +
Sbjct: 340 ISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNS 399

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +++ L K G+ +E  E   +M+ KG  P  +TY  +I  +C++ ++E+   ++ +M    
Sbjct: 400 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDG 459

Query: 580 KC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
                 ++N +I   C  G L+ A  +  K+      A A T ++L+ +Y +K    +A 
Sbjct: 460 LVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAE 519

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ 685
           K+   M ++   PDL      + R++++G  + A+      V+R ++ 
Sbjct: 520 KIFGEMISKGYKPDL-----YTYRVLVDGSCKAAN------VDRAYVH 556



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 148/568 (26%), Positives = 264/568 (46%), Gaps = 42/568 (7%)

Query: 102 LLRSL-------KPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIV--YYMMLEILS 152
           LLRSL       KP   C V+R            +  D   R    P V  +  +L  L 
Sbjct: 67  LLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALC 126

Query: 153 KTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
           +      +  +L  + +RG+       +  +      G+L  A+ ++  M  A +AP+++
Sbjct: 127 QKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD-AYIAPDVV 185

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
             NT +  L   +K+ +A ++L RM   G  P+  TYN +I GYC    +++A +L+ + 
Sbjct: 186 TYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDA 245

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIK---------EVRDLMEKMVNDSNLFHD---QGRI 320
             KG  PD+V+Y +++  LC E  ++         + +DL   +V  ++L      QG I
Sbjct: 246 IFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLI 305

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
             A +++N+M + GC PD+ TY  V+NG C++G +  A  ++      G  P+  ++   
Sbjct: 306 LHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTM 365

Query: 381 LNGLCHNGKSLEAREMINTSEEEWW---TPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           ++G C   K L+    +   E  W     P+AITY+ V++GL + GK  E  +   EM+ 
Sbjct: 366 IDGYC---KRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMIL 422

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P  +  N+LI++ C+  +++ A   +      G   + ++F +LI GFC+ GDL+ 
Sbjct: 423 KGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDG 482

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A  L   +          T+  +I A S    ++ A ++  +M+SKG  P + TYR ++ 
Sbjct: 483 AYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVD 542

Query: 558 RYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLR----- 610
             C+   V+     L +M+SK        + +V+ +L     + EA  I+  ++R     
Sbjct: 543 GSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVP 602

Query: 611 -------TASKADASTCHVLVESYLNKG 631
                  +  K + +   +LVE  + KG
Sbjct: 603 EVVDTILSTDKKEIAAPKILVEELMKKG 630



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 171/359 (47%), Gaps = 7/359 (1%)

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M   GC P    Y A+++        DQA K+  +M   G  P+  ++T  +   C  G+
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
              A  ++ +  E       + Y  V+ GL   G   +A  +  EM+++  FP     N 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM--YL 507
           ++ +LC++G +  +   + + L +G +VN       IRG C+ G LEEA++L++ M  Y+
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYI 180

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD VTY T++  L K+ +V+EA + + +M+++G +P   TY T+I  YC+   +++
Sbjct: 181 A---PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQE 237

Query: 568 LLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
             +LL+  + K     R  Y  +I  LC+ G +E A ++  +      K D    + LV+
Sbjct: 238 ATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVK 297

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
               +G+ L A +V   M      PD+     V   L   G   +A  +M   + +G++
Sbjct: 298 GLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYL 356



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 192/448 (42%), Gaps = 61/448 (13%)

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMS 331
           M L GC P   +Y  +M                + +VN +  +HDQ     A ++  +M 
Sbjct: 1   MDLFGCPPAAPAYNAIM----------------DALVNTA--YHDQ-----AHKVYVRML 37

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
             G  PD  T+T  +  FC  G    A ++L+ +   GC    ++Y   + GL  +G   
Sbjct: 38  SAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGY 97

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           +AR + +        P+  T++ V+H L ++G + E+  ++ +++K+G        N+ I
Sbjct: 98  DARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWI 157

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
           + LC  G+++ A   + E ++   A +VV + +L+RG C+   ++EA   L  M      
Sbjct: 158 RGLCEGGRLEEAVALV-ESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCI 216

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD  TY TIID   K   ++EATEL+   + KG VP  VTY ++I+  C  G VE  L+L
Sbjct: 217 PDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALEL 276

Query: 572 LEKM--------------LSKQKCRTA-----------------------YNQVIENLCS 594
             +               L K  CR                         YN VI  LC 
Sbjct: 277 FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCK 336

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            G + +A  ++   +      D  T + +++ Y  +     A ++  RM+   + PD   
Sbjct: 337 MGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAIT 396

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERG 682
              V   L   GK++E +      + +G
Sbjct: 397 YNSVLNGLCKAGKAKEVNETFEEMILKG 424



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 128/310 (41%), Gaps = 31/310 (10%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y  D   +  M++   K      A +++  M   GI   P+A +Y  ++    +AGK + 
Sbjct: 355 YLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIA--PDAITYNSVLNGLCKAGKAKE 412

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
                  M      PN +  N  I      N+L +A   + RM   G+ P+ +++N LI 
Sbjct: 413 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIH 472

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G+C    +  A  L  ++  KG S    ++  ++G                        +
Sbjct: 473 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIG-----------------------AY 509

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             +  ++ A+++  +M   G  PD+ TY  +V+G C+   +D+A   L +M   G  P+ 
Sbjct: 510 SSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSM 569

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            ++   LN L  N +  EA  +I+        P  +    ++   ++E  ++    +V E
Sbjct: 570 ATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV--DTILSTDKKE--IAAPKILVEE 625

Query: 435 MVKKGFFPTP 444
           ++KKG    P
Sbjct: 626 LMKKGHISYP 635


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/513 (28%), Positives = 251/513 (48%), Gaps = 36/513 (7%)

Query: 175 RPEAFSYLMV----AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           RP  ++  ++     +S    +  A   L  M K  + P  +   T ++ L    K+  A
Sbjct: 101 RPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDA 160

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           ++  + +   G  P+++TY  +IKG C +    +A++L+ +M  KGC PD V+Y TV+  
Sbjct: 161 VKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDS 220

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LCK++R  E      +MV       DQ                G  P+VVTY+++++GFC
Sbjct: 221 LCKDRRANEAMYFFSEMV-------DQ----------------GIPPNVVTYSSILHGFC 257

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
            +G+L++A  + +QM      PNTV++T  ++GLC  G  LEAR +     E    P+A 
Sbjct: 258 NLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAY 317

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TYS +M G   + ++ EA  +   MV KGF P+    N+LI   C+  +++ AK  + E 
Sbjct: 318 TYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEM 377

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
            ++    + V +++L++GFCQ G  + A  L  +M      PD++TY+ ++D L K+G +
Sbjct: 378 YDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHL 437

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQV 588
           +EA  L+  M    + P +  Y  +I   C  G++E   +L   +  K  Q     Y  +
Sbjct: 438 DEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVM 497

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I  L   G   EA ++  K++      ++ T +V ++ +L  G P  A ++   M  R  
Sbjct: 498 ISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGF 557

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
             D       + +++L+   E  D ++ RF+ R
Sbjct: 558 SAD-----SSTFQMLLD--LESNDEIISRFMRR 583



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 219/454 (48%), Gaps = 35/454 (7%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNK--LAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           M  + + PN+      I+ L   N+  +  A   L +M   G+ P  +T+  L+ G C  
Sbjct: 95  MDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSK 154

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            +I DA+KL DE+   G +P  ++Y T++  LCK                        G 
Sbjct: 155 AKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCK-----------------------IGH 191

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
              A +L+ +M + GC PDVV Y  V++  C+    ++A     +M   G  PN V+Y++
Sbjct: 192 TTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSS 251

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L+G C+ G+  EA  +          PN +T+++++ GL +EG + EA  V   M + G
Sbjct: 252 ILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENG 311

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     + L+   C + +MD A+K     + KG A +V  +  LI G C+   L EA 
Sbjct: 312 VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAK 371

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
           +LL +MY     PDTVTY+T++    + GR + A +L  +M S GL+P  +TY  ++   
Sbjct: 372 TLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGL 431

Query: 560 CQVGRVEDLLKLLEKM----LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
           C+ G +++  +LL+ M    +    C   YN +I+ +C+FG LE A ++   +     + 
Sbjct: 432 CKHGHLDEAFRLLKAMQESKIEPHIC--IYNILIQGMCNFGKLEAARELFSNLFVKGIQP 489

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
              T  V++   L +G+       AC MF + ++
Sbjct: 490 SVVTYTVMISGLLKEGLS----NEACEMFRKMVV 519



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 208/427 (48%), Gaps = 24/427 (5%)

Query: 152 SKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNL 211
           SK K+    K +   + + G       ++ ++    + G   NA+ +L  M++    P++
Sbjct: 153 SKAKIIDAVK-LFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDV 211

Query: 212 LICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
           +  NT I  L    +  +A+ F   M   GI PNV+TY+ ++ G+C+L ++ +A  L  +
Sbjct: 212 VAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQ 271

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMS 331
           M  +   P+ V++  ++  LCKE                       G I EA+ +   M+
Sbjct: 272 MIGRNVMPNTVTFTILVDGLCKE-----------------------GMILEARRVFEMMT 308

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
           + G  PD  TY+A+++G+C   ++D+A+K+   M   G  P+   Y   +NG C + +  
Sbjct: 309 ENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLN 368

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           EA+ +++   +   TP+ +TYS +M G  + G+   A  + +EM   G  P  +  ++L+
Sbjct: 369 EAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILL 428

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LC+ G +D A + ++         ++  +  LI+G C  G LE A  L  ++++    
Sbjct: 429 DGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQ 488

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P  VTYT +I  L K G   EA E+  KM+  G +P   TY   I  + + G   + ++L
Sbjct: 489 PSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRL 548

Query: 572 LEKMLSK 578
           +E+M+ +
Sbjct: 549 IEEMVGR 555



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 192/395 (48%), Gaps = 16/395 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMYVL 199
           I Y  +++ L K      A ++L+ M  +G  C+P+  +Y  V  S  +  +   AMY  
Sbjct: 177 ITYTTIIKGLCKIGHTTNALQLLKKMEEKG--CKPDVVAYNTVIDSLCKDRRANEAMYFF 234

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S M    + PN++  ++ +H      +L +A    ++M    + PN +T+  L+ G C  
Sbjct: 235 SEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKE 294

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
             I +A ++ + M   G  PD  +Y  +M   C + ++ E + L + MV           
Sbjct: 295 GMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVY 354

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               N      R+ EAK L+++M      PD VTY+ ++ GFC+ G    A+K+ ++M  
Sbjct: 355 NILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCS 414

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +G  P++++Y+  L+GLC +G   EA  ++   +E    P+   Y++++ G+   GKL  
Sbjct: 415 YGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEA 474

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A ++   +  KG  P+ V   ++I  L +EG  + A +  ++ +  GC  N   +   I+
Sbjct: 475 ARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQ 534

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           GF + GD   A+ L+++M       D+ T+  ++D
Sbjct: 535 GFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 175/361 (48%), Gaps = 12/361 (3%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D + Y  +++ L K +    A      M  +GI      +S ++  +   G+L  A  
Sbjct: 208 KPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATS 267

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M    V PN +     +  L     + +A R  E M   G+ P+  TY+ L+ GYC
Sbjct: 268 LFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYC 327

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------V 308
              ++ +A KL D M  KG +P    Y  ++   CK +R+ E + L+ +M         V
Sbjct: 328 LQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTV 387

Query: 309 NDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             S L   F   GR + A++L  +M   G +PD +TY+ +++G C+ G LD+A ++L+ M
Sbjct: 388 TYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAM 447

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
                +P+   Y   + G+C+ GK   ARE+ +    +   P+ +TY+V++ GL +EG  
Sbjct: 448 QESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLS 507

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
           +EAC++ R+MV  G  P     N+ IQ   R G    A + ++E + +G + +   F  L
Sbjct: 508 NEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQML 567

Query: 486 I 486
           +
Sbjct: 568 L 568


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 247/487 (50%), Gaps = 14/487 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  M+ +G    P  +  ++ A  R+G  RN++ VL  M       +   CN  ++
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLN 189

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            +     + +A+  L ++   G   ++++YN ++KG C   R  D  +L+DEM    C+P
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD-------QGRIEEAKELV 327
           + V++ T++GYLC+    + V +++ +M       D  ++         +G +E A E++
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           N+M   G  P+VV Y  V+ G C      +A+++L +M+   C  + V++   ++  C N
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G      E++         P+ ITY+ V++G  +EG + EA  +++ M   G  P  V  
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            ++++ LC  G+   A++ M + + +GC  N V F +LI   C+KG +E+A+ LL  M +
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD ++Y+T+ID L K G+ EEA EL+  M++KG+ P  + Y ++     + GRV  
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 568 LLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           ++++ + +   + +     YN VI +LC     + A      ++      + ST  +L++
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIK 609

Query: 626 SYLNKGI 632
              ++G+
Sbjct: 610 GLASEGL 616



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 223/454 (49%), Gaps = 29/454 (6%)

Query: 157 CQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
           C+  +          +   P A+++  V       G++ +A+ VL  M     AP   + 
Sbjct: 90  CRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMY 149

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           +  +           ++R LE M   G T +    N ++   C+   + +A+ L+ ++  
Sbjct: 150 HVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF 209

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
            GC  D VSY  V+  LC  KR  +V +LM++MV                       ++ 
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV-----------------------RVD 246

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C P++VT+  ++   CR G  ++  ++L QM  HGC P+   Y   ++G+C  G    A 
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E++N        PN + Y+ V+ GL    +  EA +++ EM +K      V  N+L+   
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G +D   + +++ L+ GC  +V+ +T++I GFC++G ++EA+ LL  M  C   P+T
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           V+YT ++  L   GR  +A ELM +M+ +G  P  VT+ T+I+  C+ G VE  ++LL++
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 575 MLSKQKCR---TAYNQVIENLCSFGYLEEAGKIL 605
           ML    C     +Y+ VI+ L   G  EEA ++L
Sbjct: 487 MLV-NGCSPDLISYSTVIDGLGKAGKTEEALELL 519



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 222/435 (51%), Gaps = 12/435 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +LR +A  G E    +++ ++     A +  +   ++  M +   APN++  NT I 
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L       +    L +M   G TP++  Y  +I G C    ++ A ++++ MP  G  P
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKP 319

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
           + V Y TV+  LC  +R KE  +L+ +M                + F   G ++   EL+
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            QM   GC+PDV+TYT V+NGFC+ G +D+A  +L+ M   GCKPNTVSYT  L GLC  
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G+ ++A E+++   ++   PN +T++ +++ L ++G + +A +++++M+  G  P  +  
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           + +I  L + GK + A + +   +NKG + N + ++S+     ++G + + + + D++  
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
                D V Y  +I +L K    + A +    M+S G +P   TY  +I      G  ++
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 568 LLKLLEKMLSKQKCR 582
             +LL ++ S+   R
Sbjct: 620 AQELLSELCSRGALR 634



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 216/441 (48%), Gaps = 16/441 (3%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + PN  T+  +++G C   RI DA++++DEM  KGC+P    Y+ ++   C+    +   
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 302 DLMEKM--------VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            ++E M          + NL      +QG ++EA  L+ +++  GC  D+V+Y AV+ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C        ++++ +M    C PN V++   +  LC NG      E++    E   TP+ 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
             Y+ ++ G+ +EG L  A +++  M   G  P  V  N +++ LC   +   A++ + E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              K C ++ V F  L+  FCQ G ++  + LL+ M      PD +TYTT+I+   K G 
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYN 586
           ++EA  L+  M S G  P  V+Y  V+   C  GR  D  +L+ +M+ +Q C      +N
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI-QQGCPPNPVTFN 465

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I  LC  G +E+A ++L ++L      D  +   +++     G    A ++   M N+
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525

Query: 647 NLIPDLKLCKKVSERLILEGK 667
            + P+  +   ++  L  EG+
Sbjct: 526 GISPNTIIYSSIACALSREGR 546



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 162/345 (46%), Gaps = 25/345 (7%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           +R   Y   P  + Y  +L+ L   +  + A+ +L  M ++        F+ L+  + + 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G +   + +L  M      P+++   T I+       + +A+  L+ M   G  PN ++Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             ++KG C   R  DA +L+ +M  +GC P+ V++ T++ +LCK                
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK---------------- 473

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                  +G +E+A EL+ QM   GC PD+++Y+ V++G  + G+ ++A ++L  M + G
Sbjct: 474 -------KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PNT+ Y++    L   G+  +  +M +  ++     +A+ Y+ V+  L +  +   A 
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           D    MV  G  P      +LI+ L  EG    A++ + E  ++G
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 165/635 (25%), Positives = 283/635 (44%), Gaps = 66/635 (10%)

Query: 87  LRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYM 146
           LR  W     G LR    +    Q+   LR Q D   AL+    A  +  +   P VY  
Sbjct: 24  LRPRWRASRHGPLR----AAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEE 79

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM-YVLSMMQKA 205
           ++  L         K ++  M R G + +       + +Y       +A+  +L+ +Q  
Sbjct: 80  IIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL 139

Query: 206 -AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
             +  + ++ N  ++VLV G+K+         M   GI P+V+T+N L+K  C  H+++ 
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAK 324
           A+ +++EM  +G +PD+ ++ T+M                         F ++G IE A 
Sbjct: 200 AVIMLEEMSSRGVAPDETTFTTLM-----------------------QGFVEEGSIEAAL 236

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            +  +M +MGC    VT   ++NG+C++G ++ A   +QQ    G +P+ ++Y  F+NGL
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG--------------------- 423
           C N     A ++++   +E   P+  TY++V++ L + G                     
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356

Query: 424 --------------KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
                         +L EA D+ R++  KG  P     N+LI +LC+ G    A +  +E
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
             N GC  + V + +LI   C  G L +AL LL DM        T+TY TIID L K  R
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
           +EEA E+  +M  +G+    +T+ T+I   C+  +++D  +L+ +M+S+  Q     YN 
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           ++ + C  G +++A  IL  +     + D  T   L+      G   +A KV   M  + 
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           + P  K    V + L       +A +L     E G
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 262/546 (47%), Gaps = 56/546 (10%)

Query: 140 DPIVYYMMLEIL---SKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           D +VY  +L +L   SK KL +    V   M  RGI+     F+ LM A  RA ++R A+
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLES---VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M    VAP+     T +   V    +  ALR   RM   G +   +T N LI GY
Sbjct: 202 IMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV---NDSNL 313
           C L R++DA+  I +    G  PD+++Y T +  LC+   +     +M+ MV   +D ++
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 314 FH---------DQGRIEEAKELVNQMSQMGCIPDVVTY---------------------- 342
           F            G++EEAK ++NQM   GC+PD+ T+                      
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381

Query: 343 -------------TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
                          ++N  C+VG+   A ++ ++M + GC P+ V+Y   ++ LC  GK
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A +++   E      + ITY+ ++ GL ++ ++ EA +V  +M  +G     +  N 
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI  LC++ K+D A + + + +++G   N + + S++  +C++GD+++A  +L+ M    
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
            + D VTY T+I+ L K GR + A +++  M  KG+ PT   Y  V+    +   + D L
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621

Query: 570 KLLEKM--LSKQKCRTAYNQVIENLC-SFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            L  +M  + +      Y  V   LC   G ++EA   + +++      + S+  +L E 
Sbjct: 622 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681

Query: 627 YLNKGI 632
            LN G+
Sbjct: 682 LLNLGM 687



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 174/379 (45%), Gaps = 62/379 (16%)

Query: 139 HDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRN 194
           HDP V  Y +++  L K    + AK +L  M  RG  C P+   F+ L+ A     +L  
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG--CLPDITTFNTLIAALCTGNRLEE 374

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +   +    V+P++   N  I+ L        ALR  E M+ +G TP+ +TYN LI 
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------- 307
             C L ++  A+ L+ +M   GC    ++Y T++  LCK+ RI+E  ++ ++M       
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 308 --VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
             +  + L        +I++A EL+NQM   G  P+ +TY +++  +C+ G++ +A  +L
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA----------------------------- 393
           + M  +G + + V+Y   +NGLC  G++  A                             
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614

Query: 394 ----------REMINTSEEEWWTPNAITYSVVMHGL-RREGKLSEACDVVREMVKKGFFP 442
                     REM    E     P+A+TY +V  GL R  G + EA D + EMV KGF P
Sbjct: 615 NNIRDALSLFREMAEVGE----PPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIP 670

Query: 443 TPVEINLLIQSLCREGKMD 461
                 +L + L   G  D
Sbjct: 671 EFSSFRMLAEGLLNLGMDD 689


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 163/596 (27%), Positives = 289/596 (48%), Gaps = 57/596 (9%)

Query: 114 VLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIE 173
           VLR        ++ F W  RQ  Y+H    Y   L+ L+K    Q A    + M RRG  
Sbjct: 11  VLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYP 70

Query: 174 CRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
             P+ F+Y +V     +AG+L  A  +L  ++++ V  N++  +  I      +++  AL
Sbjct: 71  --PDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDAL 128

Query: 232 RFLERMQL-AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
              + M    G  P+V+T+N L+KG C   R+ +A  L + M   GC P+ +SY T++  
Sbjct: 129 EIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDG 188

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LCK                        GR++EA  L  +M +  C+PD+V YT+ V G C
Sbjct: 189 LCK-----------------------AGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLC 225

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR--------------EM 396
           +   + +A    ++M   G K + V+++  +  LC  G + EA+              E 
Sbjct: 226 KANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEA 285

Query: 397 INTSEE---EWWTPNAITYSVVMHGLRREGKLSEACDVVREM--VKKGFFPTPVEI-NLL 450
             T EE       P+A  ++ ++H + +  +L +   + + M  +K+ + P  +E  N++
Sbjct: 286 CKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIM 345

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           + +LC+  ++D A++ + E  N G + +VV +++L+ G C+ G L+ A  LL++M     
Sbjct: 346 VDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGV 405

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            PD+ T  +I++ALSK G+V+ A   +  M ++G  P +VTY T++   C+ GR+++ + 
Sbjct: 406 FPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAIT 465

Query: 571 LLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            L KM++  KC     +Y  +I  LC  G    A  I  ++++     D    H L++  
Sbjct: 466 FLAKMVA-AKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGL 524

Query: 628 LNKGIPLLAYKVACRMFNRNLI-PDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              G+  LA +    +   +L  PD  + K V + L   GK+E+A  ++ R  + G
Sbjct: 525 ARNGLEDLALE----LLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAG 576



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 230/510 (45%), Gaps = 73/510 (14%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAG 190
           R+   + + I Y ++++   K      A  + + M+  G  C P+   F+ L+       
Sbjct: 100 RESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGG-GCVPDVVTFNSLLKGLCSGE 158

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           ++  A  +   M KA   PN++  +T +  L    +L +A R  E M      P+++ Y 
Sbjct: 159 RMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL------------------- 291
             + G C  +R+ +A     +M  KG   D V++ TV+G L                   
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCR 278

Query: 292 ---------------------------------CKEKRIKEVRDLMEKM----------- 307
                                            CK KR+ +   L ++M           
Sbjct: 279 SGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPN 338

Query: 308 VNDSNLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
           +   N+  D      +++EA+ELVN+M+  G  PDVVTY+A+V+G C++G+LD+A  +L+
Sbjct: 339 LETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLE 398

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   G  P++ +  + LN L   GK   A   + T +    TP+ +TY+ ++ GL + G
Sbjct: 399 EMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAG 458

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           ++ EA   + +MV     P      ++I +LCR G+  GA    QE + +G   + V + 
Sbjct: 459 RIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYH 518

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           SL+ G  + G  + AL LL    LCK  PD V +  ++D L K G+ E+A E++ +M   
Sbjct: 519 SLLDGLARNGLEDLALELLK-TSLCK--PDFVMHKMVVDGLCKAGKAEDACEVVERMADA 575

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
           G      TY  V+    ++G+V+   +L++
Sbjct: 576 GFPADAFTYINVVRGLRKLGKVDKARQLVD 605



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 166/353 (47%), Gaps = 22/353 (6%)

Query: 171 GIECRP----EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           GI C+     EA + ++    R+G L  A      M      P+  + NT IH +    +
Sbjct: 257 GILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKR 316

Query: 227 LAKALRFLERMQLAG---ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
           L   +   +RM+        PN+ TYN ++   C   ++ +A +L++EM   G SPD V+
Sbjct: 317 LPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVT 376

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMS 331
           Y  ++  LCK  ++    DL+E+M  +             N     G+++ A   +  M 
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMK 436

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
             G  PD+VTY  +++G C+ G +D+A   L +M    C P+  SYT  +  LC +G++ 
Sbjct: 437 ARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAA 496

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
            A  +     +    P+ + Y  ++ GL R G    A ++++  + K   P  V   +++
Sbjct: 497 GAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK---PDFVMHKMVV 553

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
             LC+ GK + A + ++   + G   +   + +++RG  + G +++A  L+DD
Sbjct: 554 DGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDD 606



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 65/144 (45%), Gaps = 3/144 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++  L ++    GA  + + M +RG+      +  L+   +R G L +    L
Sbjct: 478 DVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNG-LED--LAL 534

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +++ +   P+ ++    +  L    K   A   +ERM  AG   +  TY  +++G   L
Sbjct: 535 ELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKL 594

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVS 283
            ++  A +L+D+      S +++S
Sbjct: 595 GKVDKARQLVDDASETHTSVERLS 618


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 265/566 (46%), Gaps = 17/566 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMY 197
           D I Y  +L+ +      Q A  +LR+  ++G  C      Y  V +   + GK+  A  
Sbjct: 173 DAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACD 232

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  V PN++  N+ IH L     + KA   L +M   G+ P+ +TYN LI GY 
Sbjct: 233 LFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYS 292

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------V 308
            L + K A+++  EM  +G  P+ V+  T + +LCK  RI+E R+  + M         +
Sbjct: 293 TLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNII 352

Query: 309 NDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
           + S L H     G + +   L N M + G +P+   +  +VNG+ + G + +A  + + M
Sbjct: 353 SYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDM 412

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  P+ ++Y A ++  C  G   +A +  N   ++   PN   Y  ++ G    G L
Sbjct: 413 QKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDL 472

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A ++V E+  KG  P  +    LI  LC+EG++  A++     +  G   +V  FTSL
Sbjct: 473 VKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSL 532

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G+C  G + EA  + D M     +PD VTY T+++   KNGR+++   L  ++L KG+
Sbjct: 533 IDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGV 592

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGK 603
            PT  TY  ++      GR     ++ ++M+      T   Y+ ++  LC     EEA  
Sbjct: 593 KPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAIT 652

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           +  K+     K D    ++++           A  +   + +  L+P ++    + E LI
Sbjct: 653 VFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLI 712

Query: 664 LEGKSEEADTLMLRFVERGHIQPKSE 689
            EG  EEA+ +    ++ G + P S 
Sbjct: 713 KEGSVEEAEGVFSVMLKSG-LSPTSH 737



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/540 (23%), Positives = 242/540 (44%), Gaps = 51/540 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K +    A+ +LR M   G++     ++ L+  YS  G+ + A+ +   
Sbjct: 247 VTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKE 306

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA--------------------- 240
           M    V PN + C+T +  L    ++ +A  F + M LA                     
Sbjct: 307 MTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSM-LAKGHKLNIISYSTLLHGYATAG 365

Query: 241 ---------------GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
                          GI PN   +N L+ GY     +++A+ + ++M  +G +PD ++Y 
Sbjct: 366 CLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYL 425

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVN---DSNL---------FHDQGRIEEAKELVNQMSQM 333
            V+   C+   + +  D    M++   + N          F   G + +A+ELV ++   
Sbjct: 426 AVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNK 485

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  P ++++ +++N  C+ G + +A+++   +   G K +   +T+ ++G C  GK  EA
Sbjct: 486 GLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEA 545

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
             + +        P+ +TY  +++G  + G++ +   + RE++ KG  PT     +++  
Sbjct: 546 FRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDG 605

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           L   G+   AK+  QE +  G AV +  ++ L+ G C+    EEA+++   +       D
Sbjct: 606 LFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFD 665

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            V    +I  + K  R EEA  L   +   GLVPTV TY  ++    + G VE+   +  
Sbjct: 666 IVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFS 725

Query: 574 KMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            ML      T++  N ++  L   G + +AG  + +V   +   +AST  +L+  +  KG
Sbjct: 726 VMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKG 785



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 204/446 (45%), Gaps = 21/446 (4%)

Query: 148 LEILSKTKLCQG---------AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           L I+S + L  G            +  LM R GI      F+ L+  Y++ G +R AM++
Sbjct: 349 LNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFI 408

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
              MQK  + P++L     IH       +  A+     M   G+ PN   Y CLI+G+C 
Sbjct: 409 FEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCT 468

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNL 313
              +  A +L+ E+  KG  P  +S+ +++ +LCKE R+ E + + + ++      D N+
Sbjct: 469 HGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNI 528

Query: 314 FHDQ-------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
           F          G++ EA  + + M  +G  PD+VTY  +VNG C+ G +D    + +++ 
Sbjct: 529 FTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELL 588

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
           H G KP T +Y   L+GL H G++  A+EM     E        TYS+++ GL R     
Sbjct: 589 HKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTE 648

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA  V +++         V +N++I  + +  + + A+       + G    V  +T ++
Sbjct: 649 EAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMM 708

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
               ++G +EEA  +   M      P +     I+  L + G + +A   M ++  K ++
Sbjct: 709 ENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSIL 768

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLL 572
               T   ++  +   G+  + L LL
Sbjct: 769 FEASTASMLLSLFSCKGKHREHLNLL 794



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/519 (22%), Positives = 215/519 (41%), Gaps = 97/519 (18%)

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P V TY+ LI   C   R+  A      +  +G   D +   +++  LC  KR  E  D+
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPD------------------------- 338
                    LFH             +M ++GC+PD                         
Sbjct: 161 ---------LFH-------------RMPELGCVPDAISYSTVLKSVCDDGRSQWALDILR 198

Query: 339 ------------VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
                       VV Y+ VV+G  + G++ +A  +  +M   G  PN V+Y + ++ LC 
Sbjct: 199 MAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCK 258

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
                +A+ ++         P+ +TY+ ++HG    G+  +A  + +EM  +G  P  V 
Sbjct: 259 ARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVT 318

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            +  +  LC+ G+++ A++F    L KG  +N++++++L+ G+   G L +  +L + M 
Sbjct: 319 CSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMV 378

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                P+   +  +++  +K G V EA  +   M  +GL P V+TY  VIH +C++G ++
Sbjct: 379 RDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMD 438

Query: 567 DLLKLLEKMLSK-------------------------------------QKCRTAYNQVI 589
           D +     M+ K                                       C  ++  +I
Sbjct: 439 DAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLI 498

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
            +LC  G + EA +I   ++RT  KAD +    L++ Y   G    A++V   M +  + 
Sbjct: 499 NHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIE 558

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           PD+     +       G+ ++   L    + +G ++P +
Sbjct: 559 PDIVTYGTLVNGCCKNGRIDDGLILFRELLHKG-VKPTT 596



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 183/404 (45%), Gaps = 44/404 (10%)

Query: 323 AKELVNQMSQMG----CIPDVVTYTAVVNGFCRVGELD---------------------- 356
           A  L N+MS        +P V TY+ +++  CR   LD                      
Sbjct: 83  AVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVS 142

Query: 357 -------QAKK-------MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS-E 401
                   AK+       +  +M   GC P+ +SY+  L  +C +G+S  A +++  + +
Sbjct: 143 SLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVK 202

Query: 402 EEWWTP-NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           +    P N + YS V+HGL +EGK+ EACD+  EM ++G  P  V  N +I +LC+   +
Sbjct: 203 QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAV 262

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D A+  +++ +  G   + V + +LI G+   G  ++A+ +  +M      P+TVT +T 
Sbjct: 263 DKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTF 322

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           +  L K+GR+EEA E    ML+KG    +++Y T++H Y   G + D+  L   M+    
Sbjct: 323 VAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGI 382

Query: 581 C--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
              +  +N ++      G + EA  I   + +     D  T   ++ ++   G    A  
Sbjct: 383 VPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMD 442

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
               M ++ + P+  + + + +     G   +A+ L+     +G
Sbjct: 443 KFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKG 486



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 175/414 (42%), Gaps = 53/414 (12%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLS 200
           V+ +++   +K  + + A  +   M +RG+   P+  +YL V  A+ R G + +AM   +
Sbjct: 388 VFNILVNGYAKCGMVREAMFIFEDMQKRGLN--PDVLTYLAVIHAFCRMGSMDDAMDKFN 445

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY----------- 249
            M    V PN  +    I        L KA   +  ++  G+ P +L++           
Sbjct: 446 HMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEG 505

Query: 250 ------------------------NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
                                     LI GYC + ++ +A ++ D M   G  PD V+Y 
Sbjct: 506 RVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYG 565

Query: 286 TVMGYLCKEKRIKE----VRDLMEKMVNDS---------NLFHDQGRIEEAKELVNQMSQ 332
           T++   CK  RI +     R+L+ K V  +          LFH  GR   AKE+  +M +
Sbjct: 566 TLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFH-AGRTAAAKEMFQEMIE 624

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G    + TY+ ++ G CR    ++A  + Q++     K + V     ++ +    +  E
Sbjct: 625 SGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREE 684

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A  +  +  +    P   TY+++M  L +EG + EA  V   M+K G  PT   IN++++
Sbjct: 685 AEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVR 744

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +L  +G++  A  +M     K         + L+  F  KG   E L+LL   Y
Sbjct: 745 TLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNLLPAKY 798


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 247/487 (50%), Gaps = 14/487 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  M+ +G    P  +  ++ A  R+G  RN++ VL  M       +   CN  ++
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLN 189

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            +     + +A+  L ++   G   ++++YN ++KG C   R  D  +L+DEM    C+P
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD-------QGRIEEAKELV 327
           + V++ T++GYLC+    + V +++ +M       D  ++         +G +E A E++
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           N+M   G  P+VV Y  V+ G C      +A+++L +M+   C  + V++   ++  C N
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G      E++         P+ ITY+ V++G  +EG + EA  +++ M   G  P  V  
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            ++++ LC  G+   A++ M + + +GC  N V F +LI   C+KG +E+A+ LL  M +
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD ++Y+T+ID L K G+ EEA EL+  M++KG+ P  + Y ++     + GRV  
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 568 LLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           ++++ + +   + +     YN VI +LC     + A      ++      + ST  +L++
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIK 609

Query: 626 SYLNKGI 632
              ++G+
Sbjct: 610 GLASEGL 616



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 223/454 (49%), Gaps = 29/454 (6%)

Query: 157 CQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
           C+  +          +   P A+++  V       G++ +A+ VL  M     AP   + 
Sbjct: 90  CRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMY 149

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           +  +           ++R LE M   G T +    N ++   C+   + +A+ L+ ++  
Sbjct: 150 HVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF 209

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
            GC  D VSY  V+  LC  KR  +V +LM++MV                       ++ 
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV-----------------------RVD 246

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C P++VT+  ++   CR G  ++  ++L QM  HGC P+   Y   ++G+C  G    A 
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E++N        PN + Y+ V+ GL    +  EA +++ EM +K      V  N+L+   
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G +D   + +++ L+ GC  +V+ +T++I GFC++G ++EA+ LL  M  C   P+T
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           V+YT ++  L   GR  +A ELM +M+ +G  P  VT+ T+I+  C+ G VE  ++LL++
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 575 MLSKQKCR---TAYNQVIENLCSFGYLEEAGKIL 605
           ML    C     +Y+ VI+ L   G  EEA ++L
Sbjct: 487 MLV-NGCSPDLISYSTVIDGLGKAGKTEEALELL 519



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 222/435 (51%), Gaps = 12/435 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +LR +A  G E    +++ ++     A +  +   ++  M +   APN++  NT I 
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L       +    L +M   G TP++  Y  +I G C    ++ A ++++ MP  G  P
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKP 319

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
           + V Y TV+  LC  +R KE  +L+ +M                + F   G ++   EL+
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            QM   GC+PDV+TYT V+NGFC+ G +D+A  +L+ M   GCKPNTVSYT  L GLC  
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G+ ++A E+++   ++   PN +T++ +++ L ++G + +A +++++M+  G  P  +  
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           + +I  L + GK + A + +   +NKG + N + ++S+     ++G + + + + D++  
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
                D V Y  +I +L K    + A +    M+S G +P   TY  +I      G  ++
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 568 LLKLLEKMLSKQKCR 582
             +LL ++ S+   R
Sbjct: 620 AQELLSELCSRGALR 634



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 216/441 (48%), Gaps = 16/441 (3%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + PN  T+  +++G C   RI DA++++DEM  KGC+P    Y+ ++   C+    +   
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 302 DLMEKM--------VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            ++E M          + NL      +QG ++EA  L+ +++  GC  D+V+Y AV+ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C        ++++ +M    C PN V++   +  LC NG      E++    E   TP+ 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
             Y+ ++ G+ +EG L  A +++  M   G  P  V  N +++ LC   +   A++ + E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              K C ++ V F  L+  FCQ G ++  + LL+ M      PD +TYTT+I+   K G 
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYN 586
           ++EA  L+  M S G  P  V+Y  V+   C  GR  D  +L+ +M+ +Q C      +N
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI-QQGCPPNPVTFN 465

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I  LC  G +E+A ++L ++L      D  +   +++     G    A ++   M N+
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525

Query: 647 NLIPDLKLCKKVSERLILEGK 667
            + P+  +   ++  L  EG+
Sbjct: 526 GISPNTIIYSSIACALSREGR 546



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 162/345 (46%), Gaps = 25/345 (7%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           +R   Y   P  + Y  +L+ L   +  + A+ +L  M ++        F+ L+  + + 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G +   + +L  M      P+++   T I+       + +A+  L+ M   G  PN ++Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             ++KG C   R  DA +L+ +M  +GC P+ V++ T++ +LCK                
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK---------------- 473

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                  +G +E+A EL+ QM   GC PD+++Y+ V++G  + G+ ++A ++L  M + G
Sbjct: 474 -------KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PNT+ Y++    L   G+  +  +M +  ++     +A+ Y+ V+  L +  +   A 
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           D    MV  G  P      +LI+ L  EG    A++ + E  ++G
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 247/487 (50%), Gaps = 14/487 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  M+ +G    P  +  ++ A  R+G  RN++ VL  M       +   CN  ++
Sbjct: 130 ALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLN 189

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            +     + +A+  L ++   G   ++++YN ++KG C   R  D  +L+DEM    C+P
Sbjct: 190 AICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAP 249

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD-------QGRIEEAKELV 327
           + V++ T++GYLC+    + V +++ +M       D  ++         +G +E A E++
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           N+M   G  P+VV Y  V+ G C      +A+++L +M+   C  + V++   ++  C N
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G      E++         P+ ITY+ V++G  +EG + EA  +++ M   G  P  V  
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            ++++ LC  G+   A++ M + + +GC  N V F +LI   C+KG +E+A+ LL  M +
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD ++Y+T+ID L K G+ EEA EL+  M++KG+ P  + Y ++     + GRV  
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 568 LLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           ++++ + +   + +     YN VI +LC     + A      ++      + ST  +L++
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIK 609

Query: 626 SYLNKGI 632
              ++G+
Sbjct: 610 GLASEGL 616



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 223/454 (49%), Gaps = 29/454 (6%)

Query: 157 CQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
           C+  +          +   P A+++  V       G++ +A+ VL  M     AP   + 
Sbjct: 90  CRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMY 149

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           +  +           ++R LE M   G T +    N ++   C+   + +A+ L+ ++  
Sbjct: 150 HVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF 209

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
            GC  D VSY  V+  LC  KR  +V +LM++MV                       ++ 
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV-----------------------RVD 246

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C P++VT+  ++   CR G  ++  ++L QM  HGC P+   Y   ++G+C  G    A 
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E++N        PN + Y+ V+ GL    +  EA +++ EM +K      V  N+L+   
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G +D   + +++ L+ GC  +V+ +T++I GFC++G ++EA+ LL  M  C   P+T
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           V+YT ++  L   GR  +A ELM +M+ +G  P  VT+ T+I+  C+ G VE  ++LL++
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 575 MLSKQKCR---TAYNQVIENLCSFGYLEEAGKIL 605
           ML    C     +Y+ VI+ L   G  EEA ++L
Sbjct: 487 MLV-NGCSPDLISYSTVIDGLGKAGKTEEALELL 519



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 222/435 (51%), Gaps = 12/435 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +LR +A  G E    +++ ++     A +  +   ++  M +   APN++  NT I 
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L       +    L +M   G TP++  Y  +I G C    ++ A ++++ MP  G  P
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKP 319

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
           + V Y TV+  LC  +R KE  +L+ +M                + F   G ++   EL+
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            QM   GC+PDV+TYT V+NGFC+ G +D+A  +L+ M   GCKPNTVSYT  L GLC  
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G+ ++A E+++   ++   PN +T++ +++ L ++G + +A +++++M+  G  P  +  
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           + +I  L + GK + A + +   +NKG + N + ++S+     ++G + + + + D++  
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
                D V Y  +I +L K    + A +    M+S G +P   TY  +I      G  ++
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619

Query: 568 LLKLLEKMLSKQKCR 582
             +LL ++ S+   R
Sbjct: 620 AQELLSELCSRGALR 634



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 216/441 (48%), Gaps = 16/441 (3%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + PN  T+  +++G C   RI DA++++DEM  KGC+P    Y+ ++   C+    +   
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 302 DLMEKM--------VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            ++E M          + NL      +QG ++EA  L+ +++  GC  D+V+Y AV+ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C        ++++ +M    C PN V++   +  LC NG      E++    E   TP+ 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
             Y+ ++ G+ +EG L  A +++  M   G  P  V  N +++ LC   +   A++ + E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              K C ++ V F  L+  FCQ G ++  + LL+ M      PD +TYTT+I+   K G 
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYN 586
           ++EA  L+  M S G  P  V+Y  V+   C  GR  D  +L+ +M+ +Q C      +N
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI-QQGCPPNPVTFN 465

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I  LC  G +E+A ++L ++L      D  +   +++     G    A ++   M N+
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525

Query: 647 NLIPDLKLCKKVSERLILEGK 667
            + P+  +   ++  L  EG+
Sbjct: 526 GISPNTIIYSSIACALSREGR 546



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 162/345 (46%), Gaps = 25/345 (7%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           +R   Y   P  + Y  +L+ L   +  + A+ +L  M ++        F+ L+  + + 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G +   + +L  M      P+++   T I+       + +A+  L+ M   G  PN ++Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             ++KG C   R  DA +L+ +M  +GC P+ V++ T++ +LCK                
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK---------------- 473

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                  +G +E+A EL+ QM   GC PD+++Y+ V++G  + G+ ++A ++L  M + G
Sbjct: 474 -------KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PNT+ Y++    L   G+  +  +M +  ++     +A+ Y+ V+  L +  +   A 
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           D    MV  G  P      +LI+ L  EG    A++ + E  ++G
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 172/615 (27%), Positives = 281/615 (45%), Gaps = 47/615 (7%)

Query: 76  PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA---DERVALQFFYWAD 132
           PL   VC L  LR             LL S  PR   ++++S A   +            
Sbjct: 61  PLPLLVCFLRALR-------------LLPSSPPRPFDSLIKSYASLPNRASLAAAALAFA 107

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R   Y    + Y  +L  LS   L   A+R    M   G+      ++ L+ A    G  
Sbjct: 108 RSAGYVPSVLAYNAVLLALSDASL-TSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHR 166

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
           + A+ +L  M+ A   PN++  NT +       ++  A R +  M   G+ PN++T+N +
Sbjct: 167 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSM 226

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RDL 303
           + G C   +++DA K+ DEM  +G +PD VSY T++G  CK     E          + +
Sbjct: 227 VNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 286

Query: 304 MEKMVNDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
           M  +V  ++L H     G +E A  LV QM + G   + VT+TA+++GFC+ G LD A  
Sbjct: 287 MPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 346

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
            ++ M     KP+ V Y A +NG C  G+  EARE+++  E +   P+ +TYS ++    
Sbjct: 347 AVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 406

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +      A ++ ++M++KG  P  +  + LI+ LC E ++  A    +  +  G   +  
Sbjct: 407 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEF 466

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            +TSLI G C++G++E ALSL D M      PD VTY+ +I+ LSK+ R  EA +L+ K+
Sbjct: 467 TYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 526

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEE 600
             +  +P    Y  ++H  C+   ++ +L LL                 +  C  G + E
Sbjct: 527 YHEEPIPANTKYDALMH-CCRKAELKSVLALL-----------------KGFCMKGLMNE 568

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           A K+   +L      D S   VL+  +   G  + A     +M  R   P+      +  
Sbjct: 569 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIR 628

Query: 661 RLILEGKSEEADTLM 675
            L   G   EAD ++
Sbjct: 629 GLFENGMVVEADQVI 643



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 215/440 (48%), Gaps = 26/440 (5%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G  P+VL YN ++    D   +  A +  D M   G +P+  +Y  ++  LC        
Sbjct: 111 GYVPSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILIRALC-------- 161

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                           +G  +EA  ++  M   GC P+VVTY  +V  F R GE+D A++
Sbjct: 162 ---------------GRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAER 206

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           ++  M   G KPN V++ + +NG+C  GK  +AR++ +    E   P+ ++Y+ ++ G  
Sbjct: 207 LVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYC 266

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           + G   EA  V  EM +KG  P  V    LI  +C+ G ++ A   +++   +G  +N V
Sbjct: 267 KAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEV 326

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            FT+LI GFC+KG L++AL  +  M  C+  P  V Y  +I+     GR++EA EL+ +M
Sbjct: 327 TFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 386

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYL 598
            +KGL P VVTY T+I  YC+        +L ++ML K     A  Y+ +I  LC    L
Sbjct: 387 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRL 446

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
            +A  +   +++   + D  T   L++ +  +G    A  +  +M    ++PD+     +
Sbjct: 447 SDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVL 506

Query: 659 SERLILEGKSEEADTLMLRF 678
              L    ++ EA  L+ + 
Sbjct: 507 INGLSKSARAMEAQQLLFKL 526



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/536 (24%), Positives = 230/536 (42%), Gaps = 99/536 (18%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +LR M  RG  C P   +Y  L+ A+ RAG++  A  ++ MM    + PNL+  N+ 
Sbjct: 169 ALSILRDM--RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSM 226

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           ++ +    K+  A +  + M   G+ P+ ++YN L+ GYC      +A+ +  EM  KG 
Sbjct: 227 VNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 286

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------VNDSNL------FHDQGRIEEAKE 325
            PD V++ +++  +CK   ++    L+ +M      +N+         F  +G +++A  
Sbjct: 287 MPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 346

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
            V  M Q    P VV Y A++NG+C VG +D+A+++L +M   G KP+ V+Y+  ++  C
Sbjct: 347 AVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 406

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            N  +  A E+     E+   P+AITYS ++  L  E +LS+A  + + M+K G  P   
Sbjct: 407 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEF 466

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT---------------------- 483
               LI   C+EG ++ A     + +  G   +VV ++                      
Sbjct: 467 TYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 526

Query: 484 ----------------------------SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
                                       +L++GFC KG + EA  +   M     + D  
Sbjct: 527 YHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGS 586

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            Y+ +I    + G V +A     +ML +G  P                            
Sbjct: 587 VYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPN--------------------------- 619

Query: 576 LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
                  T+   +I  L   G + EA +++ ++L   S ADA     L++  LN+G
Sbjct: 620 ------STSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEG 669



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 117/471 (24%), Positives = 212/471 (45%), Gaps = 66/471 (14%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + +  M+  + K    + A++V   M R G+   P+  SY  L+  Y +AG    A+ V 
Sbjct: 221 VTFNSMVNGMCKAGKMEDARKVFDEMMREGLA--PDGVSYNTLVGGYCKAGCSHEALSVF 278

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG------------------ 241
           + M +  + P+++   + IHV+     L  A+  + +M+  G                  
Sbjct: 279 AEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKK 338

Query: 242 -----------------ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
                            I P+V+ YN LI GYC + R+ +A +L+ EM  KG  PD V+Y
Sbjct: 339 GFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTY 398

Query: 285 YTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFH---DQGRIEEAKELVNQMSQ 332
            T++   CK        +L ++M         +  S+L     ++ R+ +A  L   M +
Sbjct: 399 STIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIK 458

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           +G  PD  TYT++++G C+ G +++A  +  +M   G  P+ V+Y+  +NGL  + +++E
Sbjct: 459 LGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAME 518

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRR---------------EGKLSEACDVVREMVK 437
           A++++     E   P    Y  +MH  R+               +G ++EA  V + M+ 
Sbjct: 519 AQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLD 578

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           + +       ++LI   CR G +  A  F ++ L +G A N  +  SLIRG  + G + E
Sbjct: 579 RNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVE 638

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           A  ++  +  C    D      +ID     G V+   +++  M   GL+P+
Sbjct: 639 ADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 171/358 (47%), Gaps = 10/358 (2%)

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G +P V+ Y AV+        L  A++    M   G  PN  +Y   +  LC  G   EA
Sbjct: 111 GYVPSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
             ++         PN +TY+ ++    R G++  A  +V  M+  G  P  V  N ++  
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           +C+ GKM+ A+K   E + +G A + V++ +L+ G+C+ G   EALS+  +M      PD
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VT+T++I  + K G +E A  L+ +M  +GL    VT+  +I  +C+ G ++D L  + 
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 574 KMLSKQKCR-----TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
            M   ++CR       YN +I   C  G ++EA ++L ++     K D  T   ++ +Y 
Sbjct: 350 GM---RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 406

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
                  A+++  +M  + ++PD      +   L  E +  +A  L    ++ G +QP
Sbjct: 407 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLG-LQP 463



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 187/393 (47%), Gaps = 27/393 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  ++ ++ K    + A  ++R M  RG++     F+ L+  + + G L +A+  +
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV 348

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++  + P+++  N  I+   +  ++ +A   L  M+  G+ P+V+TY+ +I  YC  
Sbjct: 349 RGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKN 408

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
                A +L  +M  KG  PD ++Y +++  LC+EKR+ +   L + M+      D   +
Sbjct: 409 CDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTY 468

Query: 315 HD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +G +E A  L ++M + G +PDVVTY+ ++NG  +     +A+++L ++YH
Sbjct: 469 TSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYH 528

Query: 368 HGCKPNTVSYTAF---------------LNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
               P    Y A                L G C  G   EA ++  +  +  W  +   Y
Sbjct: 529 EEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVY 588

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           SV++HG  R G + +A    ++M+++GF P       LI+ L   G +  A + +Q+ LN
Sbjct: 589 SVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLN 648

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
                +     +LI     +G+++  L +L  M
Sbjct: 649 CCSLADAEASKALIDLNLNEGNVDAVLDVLHGM 681



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 143/339 (42%), Gaps = 27/339 (7%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           RQ R +   + Y  ++           A+ +L  M  +G++     +S ++ AY +    
Sbjct: 352 RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 411

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            +A  +   M +  V P+ +  ++ I VL    +L+ A    + M   G+ P+  TY  L
Sbjct: 412 HSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 471

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-- 310
           I G+C    ++ A+ L D+M   G  PD V+Y  ++  L K  R  E + L+ K+ ++  
Sbjct: 472 IDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEP 531

Query: 311 --SNLFHD-----------------------QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
             +N  +D                       +G + EA ++   M       D   Y+ +
Sbjct: 532 IPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVL 591

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G CR G + +A    +QM   G  PN+ S  + + GL  NG  +EA ++I        
Sbjct: 592 IHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCS 651

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             +A     ++     EG +    DV+  M K G  P+P
Sbjct: 652 LADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSP 690


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 165/635 (25%), Positives = 283/635 (44%), Gaps = 66/635 (10%)

Query: 87  LRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYM 146
           LR  W     G LR    +    Q+   LR Q D   AL+    A  +  +   P VY  
Sbjct: 24  LRPRWRASRHGPLR----AAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEE 79

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM-YVLSMMQKA 205
           ++  L         K ++  M R G + +       + +Y       +A+  +L+ +Q  
Sbjct: 80  IIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL 139

Query: 206 -AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
             +  + ++ N  ++VLV G+K+         M   GI P+V+T+N L+K  C  H+++ 
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAK 324
           A+ +++EM  +G +PD+ ++ T+M                         F ++G IE A 
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLM-----------------------QGFVEEGSIEAAL 236

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            +  +M +MGC    VT   ++NG+C++G ++ A   +QQ    G +P+ ++Y  F+NGL
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG--------------------- 423
           C N     A ++++   +E   P+  TY++V++ L + G                     
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356

Query: 424 --------------KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
                         +L EA D+ R++  KG  P     N+LI +LC+ G    A +  +E
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
             N GC  + V + +LI   C  G L +AL LL DM        T+TY TIID L K  R
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
           +EEA E+  +M  +G+    +T+ T+I   C+  +++D  +L+ +M+S+  Q     YN 
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           ++ + C  G +++A  IL  +     + D  T   L+      G   +A KV   M  + 
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           + P  K    V + L       +A +L     E G
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 262/546 (47%), Gaps = 56/546 (10%)

Query: 140 DPIVYYMMLEIL---SKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           D +VY  +L +L   SK KL +    V   M  RGI+     F+ LM A  RA ++R A+
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLES---VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M    VAP+     T +   V    +  ALR   RM   G +   +T N LI GY
Sbjct: 202 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV---NDSNL 313
           C L R++DA+  I +    G  PD+++Y T +  LC+   +     +M+ MV   +D ++
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 314 FH---------DQGRIEEAKELVNQMSQMGCIPDVVTY---------------------- 342
           F            G++EEAK ++NQM   GC+PD+ T+                      
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381

Query: 343 -------------TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
                          ++N  C+VG+   A ++ ++M + GC P+ V+Y   ++ LC  GK
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A +++   E      + ITY+ ++ GL ++ ++ EA +V  +M  +G     +  N 
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI  LC++ K+D A + + + +++G   N + + S++  +C++GD+++A  +L+ M    
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
            + D VTY T+I+ L K GR + A +++  M  KG+ PT   Y  V+    +   + D L
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621

Query: 570 KLLEKM--LSKQKCRTAYNQVIENLC-SFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            L  +M  + +      Y  V   LC   G ++EA   + +++      + S+  +L E 
Sbjct: 622 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681

Query: 627 YLNKGI 632
            LN G+
Sbjct: 682 LLNLGM 687



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 174/379 (45%), Gaps = 62/379 (16%)

Query: 139 HDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRN 194
           HDP V  Y +++  L K    + AK +L  M  RG  C P+   F+ L+ A     +L  
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG--CLPDITTFNTLIAALCTGNRLEE 374

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +   +    V+P++   N  I+ L        ALR  E M+ +G TP+ +TYN LI 
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------- 307
             C L ++  A+ L+ +M   GC    ++Y T++  LCK+ RI+E  ++ ++M       
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 308 --VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
             +  + L        +I++A EL+NQM   G  P+ +TY +++  +C+ G++ +A  +L
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA----------------------------- 393
           + M  +G + + V+Y   +NGLC  G++  A                             
Sbjct: 555 ETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRR 614

Query: 394 ----------REMINTSEEEWWTPNAITYSVVMHGL-RREGKLSEACDVVREMVKKGFFP 442
                     REM    E     P+A+TY +V  GL R  G + EA D + EMV KGF P
Sbjct: 615 NNIRDALSLFREMAEVGE----PPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIP 670

Query: 443 TPVEINLLIQSLCREGKMD 461
                 +L + L   G  D
Sbjct: 671 EFSSFRMLAEGLLNLGMDD 689


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 214/416 (51%), Gaps = 9/416 (2%)

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           N +   +   + M+  G+ PNV TYN L++  C  +R+  A K++DEM  KGC PD V+Y
Sbjct: 138 NMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTY 197

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------QGRIEEAKELVNQMSQMGCIP 337
            T++  LCK  R+ E  +++  M   +  ++        + R++E   +V+ M   G  P
Sbjct: 198 ATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQP 257

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           +V+TYT +V+ FC+ GEL  A  +L +M   GC PN V++TA + GL  +G+  +A +M 
Sbjct: 258 NVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMW 317

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
                E W P+ ++Y++++ GL   G L  A  ++  M + G FP     + LI    + 
Sbjct: 318 RWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKA 377

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G + GA     +    GC  NVV +T+++  FC+K    +A SL+D M L    P+TVT+
Sbjct: 378 GDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTF 437

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
            T+I +L    RV  A  +  +M   G VP   TY  +IH   + G   D L ++ +M S
Sbjct: 438 NTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQS 497

Query: 578 K--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
              +     YN V+  LC      EA   +GK++    + +A T   ++ +Y  +G
Sbjct: 498 HGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEG 553



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 202/431 (46%), Gaps = 21/431 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  ++ +L K      A  VL  M        P A SY  +++A  R  +++    
Sbjct: 193 DDVTYATIVSVLCKLDRLDEATEVLAAMP-------PVAASYNAIVLALCREFRMQEVFS 245

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V+S M    + PN++   T +       +L  A   L RM + G TPNV+T+  L++G  
Sbjct: 246 VVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLF 305

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
           D  R+ DA+ +   M  +G +P  VSY  ++  LC    +K    ++  M          
Sbjct: 306 DDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVR 365

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 + F   G +  A  + N MS+ GC P+VV YT +V+ FC+    +QAK ++ +M
Sbjct: 366 TYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKM 425

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
               C PNTV++   +  LC   +   A  + +        PN  TY+ ++HGL REG  
Sbjct: 426 LLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNC 485

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A  +V EM   G   + V  N ++  LC+      A  F+ + + +G   N   F+++
Sbjct: 486 GDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAI 545

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I  +C++G++  A  +L  M +     + + YT ++  L    ++ +A   ++KML +G+
Sbjct: 546 IHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGI 605

Query: 546 VPTVVTYRTVI 556
            P  VT+  ++
Sbjct: 606 YPNTVTWNVLV 616



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 153/330 (46%), Gaps = 15/330 (4%)

Query: 120 DERV--ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           D RV  AL  + W   +  +    + Y +++  L      +GA  +L  M + G      
Sbjct: 307 DGRVHDALDMWRWMVAE-GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVR 365

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            +S L+  +S+AG L  A+ + + M ++   PN+++    + V        +A   +++M
Sbjct: 366 TYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKM 425

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
            L    PN +T+N LI+  CD  R+  A+ +  EM   GC P+  +Y  ++  L +E   
Sbjct: 426 LLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNC 485

Query: 298 KEVRDLMEKM----VNDSNLFHD-------QGRIE-EAKELVNQMSQMGCIPDVVTYTAV 345
            +   ++ +M    +  S + ++       Q R+  EA   V +M   G  P+  T++A+
Sbjct: 486 GDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAI 545

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++ +C+ GE+  A  ML  M    C  N + YT  +  LC+  K ++A   +     E  
Sbjct: 546 IHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGI 605

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREM 435
            PN +T++V++ G+ R     E  D ++ +
Sbjct: 606 YPNTVTWNVLVRGVFRNLGCIEPSDFIQHI 635



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 8/180 (4%)

Query: 455 CREGKMDGAKKFMQECLNK-GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           C    M GA   + + + K G   NV  +  L+R  CQ   +  A  +LD+M      PD
Sbjct: 134 CCGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPD 193

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VTY TI+  L K  R++EATE++  M      P   +Y  ++   C+  R++++  ++ 
Sbjct: 194 DVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVS 248

Query: 574 KMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            M+ +  Q     Y  +++  C  G L  A  IL +++ T    +  T   LV    + G
Sbjct: 249 DMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDG 308


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 233/433 (53%), Gaps = 21/433 (4%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAG----ITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           N+ ++V++      + L F + +  +     I+PN L++N +IK  C L  +  AI++  
Sbjct: 152 NSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFR 211

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NLFHD----QG 318
            MP + C PD  +Y T+M  LCKE+RI E   L+++M ++         N+  D    +G
Sbjct: 212 GMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKG 271

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
            +    +LV+ M   GC+P+ VTY  +++G C  G+LD+A  +L++M    C PN V+Y 
Sbjct: 272 DLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYG 331

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             +NGL    ++ +A  ++++ EE  +  N   YSV++ GL +EGK  EA  + R+M +K
Sbjct: 332 TLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK 391

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  V  ++L+  LCREGK + AK+ +   +  GC  N   ++SL++GF + G  EEA
Sbjct: 392 GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           + +  +M       +   Y+ +ID L   GRV+EA  +  KML+ G+ P  V Y ++I  
Sbjct: 452 VQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKG 511

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRT-----AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
            C +G ++  LKL  +ML +++ ++      YN +++ LC    +  A  +L  +L    
Sbjct: 512 LCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGC 571

Query: 614 KADASTCHVLVES 626
             D  TC+  + +
Sbjct: 572 DPDVITCNTFLNT 584



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 220/499 (44%), Gaps = 75/499 (15%)

Query: 124 ALQFF-YWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
            L+F+ Y  +        P  + + ++++ L K +    A  V R M  R  +C P+ ++
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPER--KCLPDGYT 224

Query: 181 Y--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           Y  LM    +  ++  A+ +L  MQ    +P+ +I N  I  L     L +  + ++ M 
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
           L G  PN +TYN LI G C   ++  A+ L++ M    C P+ V+Y T++  L K++R  
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344

Query: 299 EVRDLMEKM-------------VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
           +   L+  M             V  S LF  +G+ EEA  L  +M++ GC P++V Y+ +
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFK-EGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           V+G CR G+ ++AK++L +M   GC PN  +Y++ + G    G   EA ++    ++   
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI------------------ 447
           + N   YSV++ GL   G++ EA  V  +M+  G  P  V                    
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523

Query: 448 --------------------NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
                               N+L+  LC +  +  A   +   L++GC  +V+   + + 
Sbjct: 524 LYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583

Query: 488 GFCQKGD-LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
              +K +  ++  S L+++ +                L K  RV  A  ++  ML K L 
Sbjct: 584 TLSEKSNSCDKGRSFLEELVV---------------RLLKRQRVSGACTIVEVMLGKYLA 628

Query: 547 PTVVTYRTVIHRYCQVGRV 565
           P   T+  ++   C+  ++
Sbjct: 629 PKTSTWAMIVREICKPKKI 647



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 181/378 (47%), Gaps = 9/378 (2%)

Query: 279 PDK---VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
           PDK   + +  V  + CK + +K    ++  ++N+  L+H    +E    +VN    M  
Sbjct: 128 PDKAVDLFHRMVDEFRCK-RSVKSFNSVLNVIINEG-LYHRG--LEFYDYVVNSNMNMNI 183

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            P+ +++  V+   C++  +D+A ++ + M    C P+  +Y   ++GLC   +  EA  
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +++  + E  +P+ + Y+V++ GL ++G L+    +V  M  KG  P  V  N LI  LC
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
            +GK+D A   ++  ++  C  N V + +LI G  ++    +A+ LL  M       +  
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 363

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            Y+ +I  L K G+ EEA  L  KM  KG  P +V Y  ++   C+ G+  +  ++L +M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423

Query: 576 LSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           ++      AY  + +++     G  EEA ++  ++ +T    +     VL++     G  
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483

Query: 634 LLAYKVACRMFNRNLIPD 651
             A  V  +M    + PD
Sbjct: 484 KEAMMVWSKMLTIGIKPD 501



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 183/393 (46%), Gaps = 17/393 (4%)

Query: 294 EKRIKEVRDLMEKMVNDSNL------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           EK  K    +    + DS L      + + G  +  ++L++++     +    ++  V  
Sbjct: 61  EKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFR 120

Query: 348 GFCRVGELDQAKKMLQQMY-HHGCKPNTVSYTAFLN-----GLCHNGKSLEARE-MINTS 400
            + +    D+A  +  +M     CK +  S+ + LN     GL H G  LE  + ++N++
Sbjct: 121 AYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRG--LEFYDYVVNSN 178

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
                +PN +++++V+  L +   +  A +V R M ++   P       L+  LC+E ++
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D A   + E  ++GC+ + V +  LI G C+KGDL     L+D+M+L    P+ VTY T+
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-- 578
           I  L   G++++A  L+ +M+S   +P  VTY T+I+   +  R  D ++LL  M  +  
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
              +  Y+ +I  L   G  EEA  +  K+     K +     VLV+    +G P  A +
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           +  RM     +P+      + +     G  EEA
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 151/337 (44%), Gaps = 29/337 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K +    A R+L  M  RG       +S L+    + GK   AM +   
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK 387

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +    PN+++ +  +  L    K  +A   L RM  +G  PN  TY+ L+KG+     
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFHD 316
            ++A+++  EM   GCS +K  Y  ++  LC   R+KE   +  KM+      D+  +  
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507

Query: 317 Q-------GRIEEAKELVNQM---SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                   G ++ A +L ++M    +    PDVVTY  +++G C   ++ +A  +L  M 
Sbjct: 508 IIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSML 567

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             GC P+ ++   FLN L     S +                +    +V+  L+R+ ++S
Sbjct: 568 DRGCDPDVITCNTFLNTLSEKSNSCDKGR-------------SFLEELVVRLLKRQ-RVS 613

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
            AC +V  M+ K   P      ++++ +C+  K++ A
Sbjct: 614 GACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 2/214 (0%)

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           +N   + N ++F  +I+  C+   ++ A+ +   M   K  PD  TY T++D L K  R+
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQV 588
           +EA  L+ +M S+G  P+ V Y  +I   C+ G +  + KL++ M  K        YN +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I  LC  G L++A  +L +++ +    +  T   L+   + +     A ++   M  R  
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             +  +   +   L  EGK+EEA +L  +  E+G
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 12/218 (5%)

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD------PDTVTYTTIIDALSKNG 528
           C  +V +F S++     +G     L   D  Y+   +      P+ +++  +I AL K  
Sbjct: 144 CKRSVKSFNSVLNVIINEGLYHRGLEFYD--YVVNSNMNMNISPNGLSFNLVIKALCKLR 201

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA---Y 585
            V+ A E+   M  +  +P   TY T++   C+  R+++ + LL++M S + C  +   Y
Sbjct: 202 FVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS-EGCSPSPVIY 260

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           N +I+ LC  G L    K++  +       +  T + L+     KG    A  +  RM +
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
              IP+      +   L+ + ++ +A  L+    ERG+
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 263/537 (48%), Gaps = 19/537 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+LR +  RG      A+  ++      G   +A  +   M    V PNL   N  +H
Sbjct: 142 ALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLH 197

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L     + +A   L ++   G++ N+ TYN  I+G C+  R+ +A++L+D M      P
Sbjct: 198 ALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-P 256

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKELV 327
           D V+Y T++  LCK+   +E    + +M+N   L  D               ++EA EL+
Sbjct: 257 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 316

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
                 G +PD VTY +++NG C  G++++A ++  +    G KP+ V Y + + GLC  
Sbjct: 317 KDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 376

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G  L A +++N   EE   P+  TY++V++GL + G +S+A  V+ + + KG+ P     
Sbjct: 377 GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF 436

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N LI   C+  K+D A + ++     G A + + + S++ G C+ G + E      +M L
Sbjct: 437 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 496

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ +TY  +I+   ++ ++EEA+++++KM  +GL P  V++ T+I+ +C+ G +E 
Sbjct: 497 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 556

Query: 568 LLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
              L +K+  K    TA  +N +I        +  A KI  ++L    +AD+ T  VL++
Sbjct: 557 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 616

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                     AY     M  +  IP +    +V   L +  +  +A  ++   V+ G
Sbjct: 617 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 673



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 230/476 (48%), Gaps = 41/476 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  ++  L K  + Q A   LR M  +G  C P+ F+Y  ++  Y +   ++ A  
Sbjct: 257 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG--CLPDDFTYNTIIDGYCKISMVQEATE 314

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L         P+ +   + I+ L     + +AL      Q  GI P+++ YN L+KG C
Sbjct: 315 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 374

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               I  A+++++EM  +GC PD  +Y  V+  LCK                        
Sbjct: 375 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK-----------------------M 411

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G I +A  ++N     G +PDV T+  +++G+C+  +LD A +++++M+ +G  P+T++Y
Sbjct: 412 GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITY 471

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
            + LNGLC  GK  E  E       +   PN ITY++++    R  K+ EA  V+ +M +
Sbjct: 472 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ 531

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P  V  N LI   CR G ++GA    Q+   KG +     F +LI  F  K ++  
Sbjct: 532 EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHM 591

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI- 556
           A  + D+M       D+ TY  +ID   K   V+ A   +++M+ KG +P++ T+  VI 
Sbjct: 592 AEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 651

Query: 557 -----HRYCQ-VGRVEDLLKL------LEKMLSKQKCRTAYNQV-IENLCSFGYLE 599
                HR  Q VG +  ++K+      ++ +L+  K   A  ++ +E+L   G++ 
Sbjct: 652 SLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHIS 707



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 236/492 (47%), Gaps = 46/492 (9%)

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
           AY+RAG+LR+A+     M   A  P     N  +  LV      +A +   RM  AG++P
Sbjct: 62  AYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSP 121

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG----CS---------------------- 278
           ++ T+   ++ +C   R   A++L+  +P +G    C+                      
Sbjct: 122 DLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQML 181

Query: 279 -----PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH---------DQGRIE 321
                P+  ++  V+  LCK   + E   L+ K++      NLF          + GR+ 
Sbjct: 182 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLP 241

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA  LV+ M     +PDVVTY  ++ G C+     +A   L++M + GC P+  +Y   +
Sbjct: 242 EAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 300

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G C      EA E++  +  + + P+ +TY  +++GL  EG +  A ++  E   KG  
Sbjct: 301 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 360

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N L++ LC +G +  A + M E   +GC  ++  +  +I G C+ G++ +A  +
Sbjct: 361 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 420

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           ++D  +    PD  T+ T+ID   K  +++ A +L+ +M   G+ P  +TY +V++  C+
Sbjct: 421 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 480

Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G+V ++ +  ++M+ K        YN +IEN C    +EEA K++ K+ +     DA +
Sbjct: 481 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 540

Query: 620 CHVLVESYLNKG 631
            + L+  +   G
Sbjct: 541 FNTLIYGFCRNG 552



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 201/468 (42%), Gaps = 25/468 (5%)

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
            R+  A I P    Y   I+ Y    R++DA+   + M L  C P   +Y  +M  L   
Sbjct: 45  SRLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDA 101

Query: 295 KRIKEVRDLMEKMVND--SNLFHDQ----------GRIEEAKELVNQMSQMGCIPDVVTY 342
               +   +  +M+    S   H             R   A  L+  +   G     V Y
Sbjct: 102 AYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAY 157

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             VV G    G    A+++  QM H    PN  ++   L+ LC  G  LEA  ++    +
Sbjct: 158 CTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQ 217

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
              + N  TY++ + GL   G+L EA  +V  M +    P  V  N LI+ LC++     
Sbjct: 218 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQE 276

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A  +++  +N+GC  +   + ++I G+C+   ++EA  LL D       PD VTY ++I+
Sbjct: 277 AMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 336

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
            L   G VE A EL  +  +KG+ P +V Y +++   C  G +   L+++ +M +++ C 
Sbjct: 337 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM-AEEGCH 395

Query: 583 T---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                YN VI  LC  G + +A  ++   +      D  T + L++ Y  +     A ++
Sbjct: 396 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 455

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG-HIQP 686
             RM+   + PD      V   L   GK  E +      + +G H  P
Sbjct: 456 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 503



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/308 (19%), Positives = 128/308 (41%), Gaps = 27/308 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y  D   +  +++   K      A +++  M   GI      ++ ++    +AGK+    
Sbjct: 429 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 488

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
                M      PN +  N  I      NK+ +A + + +M   G+ P+ +++N LI G+
Sbjct: 489 ETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGF 548

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C    ++ A  L  ++  KG S    ++ T++G                        F  
Sbjct: 549 CRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG-----------------------AFSG 585

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +  +  A+++ ++M   G   D  TY  +++G C+   +D+A   L +M   G  P+  +
Sbjct: 586 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMST 645

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           +   +N L  N +  +A  +I+   +    P  +    +++  ++E  ++    +V +++
Sbjct: 646 FGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNADKKE--IAAPKILVEDLM 701

Query: 437 KKGFFPTP 444
           KKG    P
Sbjct: 702 KKGHISYP 709


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 254/519 (48%), Gaps = 14/519 (2%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L  L +T     A  +   + R GIE      + ++ A  +  K  N M+ LS M+   
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKG 287

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           V  +++  NT I+       + +A + L      G+ P +LTYN ++ G C + +   A 
Sbjct: 288 VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAK 347

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNL---F 314
            ++ EM   G +P+  +Y T++  +C+   I E +++ ++M         V+ S+L    
Sbjct: 348 DVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVL 407

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G + +A     +M + G +PD V YT +++GFCR G L  A KM  +M   GC  + 
Sbjct: 408 ARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDV 467

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y  FLNGLC      +A  + N   E    P+  T++ ++ G  ++G + +A ++   
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEA 527

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MV+    P  V  N LI   C+ G+M  AK+   + + K    + +++ +++ GFC  G 
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           L EAL+L D M      P+ VT  T+I    ++G + +A E + KM+S G++P   +Y T
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I  Y +   +E    L+ +M  +  Q     YN ++   C+ G ++EA ++L K++   
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              D +T   L+  ++++     A++    M  R L+PD
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 148/580 (25%), Positives = 261/580 (45%), Gaps = 48/580 (8%)

Query: 113 AVLRSQADERVALQFFYWADRQW-RYRHDPIVYYMMLEILSKTK-LCQGAKRVLRLMARR 170
            + R + D  + L+F       +  ++H  +    M+  L + + L +    +LR++ + 
Sbjct: 106 VLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKS 165

Query: 171 GIE----------------CRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
           G+                      +  L+  Y +A KLR       ++++  V+ ++  C
Sbjct: 166 GVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINAC 225

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N  +  LV    +  A      +   GI  NV T N ++   C   + ++ +  + +M  
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
           KG   D V+Y T++   C+E                       G +EEA +L+N  S  G
Sbjct: 286 KGVFADIVTYNTLINAYCRE-----------------------GLVEEAFQLLNSFSSRG 322

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P ++TY A++ G C++G+ D+AK +L +M   G  PN  +Y   L  +C     LEA+
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E+ +        P+ +++S ++  L R G L +A    REM + G  P  V   +LI   
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CR G +  A K   E L +GC ++VV + + + G C+K    +A  L ++M      PD 
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            T+TT+I    K+G +++A  L   M+   L P  VTY T+I  +C+ G +    +L + 
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562

Query: 575 MLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M+ K       +Y  V+   CS G L EA  +  ++L    + +  TC+ L++ Y   G 
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
              AY+   +M +  +IPD       S   +++G  +EA+
Sbjct: 623 MPKAYEYLSKMISNGIIPD-----SFSYNTLIDGYLKEAN 657



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 221/437 (50%), Gaps = 23/437 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +L  L K      AK VL  M + G+      ++ L+V   R   +  A  +   
Sbjct: 328 LTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDE 387

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  V P+L+  ++ I VL     L +AL     M+ +GI P+ + Y  LI G+C    
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + DA+K+ DEM  +GC  D V+Y T +  LCK+K                 +F D     
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKK-----------------MFAD----- 485

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A  L N+M + G +PD  T+T ++ G+C+ G +D+A  + + M     KP+ V+Y   +
Sbjct: 486 -ADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G C  G+   A+E+ +    +   P+ I+Y  V++G    G L EA ++  +M++KG  
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N LI+  CR G M  A +++ + ++ G   +  ++ +LI G+ ++ +LE+A  L
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFIL 664

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           +++M       + +TY  I++     G+++EA +++ KM+  G+ P   TY ++I+ +  
Sbjct: 665 INEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVS 724

Query: 562 VGRVEDLLKLLEKMLSK 578
              +++  +  ++ML +
Sbjct: 725 QDNMKEAFRFHDEMLQR 741



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 129/272 (47%), Gaps = 2/272 (0%)

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ GL R G +  A ++  E+V+ G       +N+++ +LC++ K +    F+ +   KG
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKG 287

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              ++V + +LI  +C++G +EEA  LL+       +P  +TY  I+  L K G+ + A 
Sbjct: 288 VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAK 347

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENL 592
           +++++ML  GL P   TY T++   C+   + +  ++ ++M  +       +++ +I  L
Sbjct: 348 DVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVL 407

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
              G+L +A     ++ R+    D     +L++ +   G    A K+   M  R    D+
Sbjct: 408 ARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDV 467

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
                    L  +    +AD L    VERG +
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMV 499



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 27/238 (11%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNA 195
           + D + Y  +++   K      AK +   M R+ I   P+  SY  V   +  +G L  A
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDI--IPDHISYGTVLNGFCSSGLLPEA 591

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + +   M +  + PNL+ CNT I        + KA  +L +M   GI P+  +YN LI G
Sbjct: 592 LNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           Y     ++ A  LI+EM  +G   + ++Y  ++   C E                     
Sbjct: 652 YLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAE--------------------- 690

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
             G+++EA++++ +M ++G  PD  TY++++NG      + +A +   +M   G  P+
Sbjct: 691 --GKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/563 (26%), Positives = 278/563 (49%), Gaps = 17/563 (3%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGA-KRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLR 193
           Y  D   Y  +++ L   K  Q A + +L + A  G  C P   SY  ++  + + G++ 
Sbjct: 161 YTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVD 220

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A ++   M      P+++  ++ I  L     + KA   L+ M   G+ PN  TYN +I
Sbjct: 221 KAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMI 280

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---- 309
           +GYC L ++++A++L+ +M   G  PD V+Y  ++ Y CK  R  E R + + MV     
Sbjct: 281 RGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQK 340

Query: 310 -DSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
            +S ++H        +G + + ++L++ M + G   +   +  ++  + + G +D+A   
Sbjct: 341 PNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTA 400

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             +M  +G +P+ VSY+  ++ LC  G+  +A    N    E  +PN I+++ ++HGL  
Sbjct: 401 FTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCS 460

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            G+  +  ++  EM+ +G  P  + +N ++ +LC+EG++  A+ F    ++ G   NVV+
Sbjct: 461 IGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVS 520

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           + +LI G+C  G ++E++   D M      PD+ TY  +++   KNGRVE+A  L  +M 
Sbjct: 521 YNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMF 580

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLE 599
            K +    +T   ++H   Q GR+    +L  KM+ +  Q     YN V+  LC    ++
Sbjct: 581 RKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVD 640

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           EA ++   +     + D  T ++++ + L  G    A  +   M  R  +P +     + 
Sbjct: 641 EALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMI 700

Query: 660 ERLILEGKSEEADTLMLRFVERG 682
           +  I EG  EE+D L L   + G
Sbjct: 701 KSRIEEGLLEESDDLFLSMEKNG 723



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 217/446 (48%), Gaps = 18/446 (4%)

Query: 247 LTYNCLIKGYCDLHRIKDAIKLI-DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           +T N LIKG CD  R  DA+ ++   MP  G +PD  SY  ++  LC EK+ +E  +L+ 
Sbjct: 130 VTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLL 189

Query: 306 KMVNDSNL---------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            M  D                  F  +G +++A  L ++M   G  PDVVTY+++++G C
Sbjct: 190 HMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLC 249

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +   +++A+ +LQ M+  G  PNT +Y   + G C  G+  EA  ++         P+ +
Sbjct: 250 KAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV 309

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY +++    + G+ +EA  V   MV+KG  P     ++L+     +G +   +  +   
Sbjct: 310 TYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 369

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           +  G       F  LI  + + G +++A++   +M      PD V+Y+T+I  L K GRV
Sbjct: 370 IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRV 429

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQV 588
           E+A     +M+S+GL P ++++ ++IH  C +G  + + +L  +M+++     A   N +
Sbjct: 430 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 489

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           ++NLC  G + EA      V+    K +  + + L++ Y   G    + K   RM +  L
Sbjct: 490 MDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGL 549

Query: 649 IPDLKLCKKVSERLILEGKSEEADTL 674
            PD      +       G+ E+A  L
Sbjct: 550 RPDSWTYNALLNGYFKNGRVEDALAL 575



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 235/472 (49%), Gaps = 29/472 (6%)

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG---CSPDKVSYYTVMGY 290
             RM   G TP+V +YN LIKG C   + ++A++L+  M   G   CSP+ VSY T++  
Sbjct: 153 FRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDG 212

Query: 291 LCKEKRIKEVRDLMEKMVND---------SNLFHDQGR---IEEAKELVNQMSQMGCIPD 338
             KE  + +   L ++M+           S+L     +   + +A+ ++  M   G +P+
Sbjct: 213 FFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPN 272

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
             TY  ++ G+C +G+L++A ++L++M   G +P+ V+Y   +   C  G+  EAR + +
Sbjct: 273 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFD 332

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
           +   +   PN+  Y +++HG   +G L +  D++  M++ G        N+LI +  + G
Sbjct: 333 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHG 392

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
            +D A     E    G   +VV+++++I   C+ G +E+A+   + M      P+ +++T
Sbjct: 393 AVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFT 452

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV---EDLLKLLEKM 575
           ++I  L   G  ++  EL  +M+++G+ P  +   T++   C+ GRV   +D   ++  +
Sbjct: 453 SLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHI 512

Query: 576 LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
             K     +YN +I+  C  G ++E+ K   +++    + D+ T + L+  Y   G    
Sbjct: 513 GVKPNV-VSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVED 571

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILE-----GKSEEADTLMLRFVERG 682
           A  +   MF +    D+K C  ++  +IL      G+   A  L ++ V+RG
Sbjct: 572 ALALYREMFRK----DVKFC-AITSNIILHGLFQAGRIVAARELYMKMVDRG 618



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 217/451 (48%), Gaps = 27/451 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + +  +Y+++L   +        + +L LM R GI     AF+ L+ AY++ G +  AM 
Sbjct: 340 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 399

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
             + M++  + P+++  +T IH+L    ++  A+    +M   G++PN++++  LI G C
Sbjct: 400 AFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLC 459

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
            +   K   +L  EM  +G  PD +   T+M  LCKE                       
Sbjct: 460 SIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKE----------------------- 496

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR+ EA++  + +  +G  P+VV+Y  +++G+C VG++D++ K   +M   G +P++ +Y
Sbjct: 497 GRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTY 556

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
            A LNG   NG+  +A  +      +     AIT ++++HGL + G++  A ++  +MV 
Sbjct: 557 NALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVD 616

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G        N ++  LC    +D A +  ++  +K   ++V  F  +I    + G ++E
Sbjct: 617 RGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDE 676

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A SL   M L    P  +TY+ +I +  + G +EE+ +L + M   G          +I 
Sbjct: 677 AKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIR 736

Query: 558 RYCQVGRVED----LLKLLEKMLSKQKCRTA 584
           R  + G V      L K+ EK  S +    A
Sbjct: 737 RLLEKGDVRRAGTYLTKIDEKNFSVEASTAA 767


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 246/484 (50%), Gaps = 27/484 (5%)

Query: 172 IECRPEA--FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           I  RP    F   + ++++  +    + + + M    V  N+   N  I+ L   N +  
Sbjct: 87  INPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDF 146

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           ++  L +M   GI P+ +T+N LI G C+  +IK+A++L +EM  +G  P+ +SY TV+ 
Sbjct: 147 SVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVIN 206

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            LCK                        G    A ++  +M Q GC P+VVTY+ +++  
Sbjct: 207 GLCK-----------------------TGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSL 243

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+   ++ A + L +M   G  PN  +Y + ++G C+ G+  EA  +          PN 
Sbjct: 244 CKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNT 303

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           +T+++++ GL +EG +SEA  V   M +KG  P     N L+   C +  M+ AKK  + 
Sbjct: 304 VTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEI 363

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            + KGCA    ++  LI G+C+   ++EA SLL +MY    +PDTVTY+T++  L + GR
Sbjct: 364 MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGR 423

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
            +EA  L  +M S G  P +VTY  ++  +C+ G +++ LKLL+ M  K  +     Y  
Sbjct: 424 PKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTI 483

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +IE +   G LE A ++  K+    ++ D  T  V+++  L +G+   AY +  +M +  
Sbjct: 484 LIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 543

Query: 648 LIPD 651
            +P+
Sbjct: 544 FLPN 547



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 226/481 (46%), Gaps = 38/481 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D I +  ++  L      + A  +   M +RG E  P   SY  V     + G    A+ 
Sbjct: 162 DAITFNALINGLCNEGKIKEAVELFNEMVKRGHE--PNVISYTTVINGLCKTGNTSMAVD 219

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   M++    PN++  +T I  L     +  A+ FL  M   GI PNV TYN ++ G+C
Sbjct: 220 VFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFC 279

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
           +L ++ +A +L  EM  +   P+ V++  ++  LCKE                       
Sbjct: 280 NLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKE----------------------- 316

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G + EA+ +   M++ G  PD+ TY A+++G+C    +++AKK+ + M   GC P   SY
Sbjct: 317 GMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSY 376

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              +NG C + +  EA+ ++     +   P+ +TYS +M GL + G+  EA ++ +EM  
Sbjct: 377 NILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCS 436

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G  P  V   +L+   C+ G +D A K ++    K    N+V++T LI G    G LE 
Sbjct: 437 YGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEV 496

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A  L   ++     PD  TYT +I  L K G  +EA +L  KM   G +P   +Y  +I 
Sbjct: 497 AKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQ 556

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGY---LEEAGKILGKVLRTASK 614
            + Q       ++L+++M+ K        +   NL +F     LE   +I+ + +R +S+
Sbjct: 557 GFLQNQDSSTAIRLIDEMVGK--------RFSVNLSTFQMLLDLESQDEIISQFMRGSSQ 608

Query: 615 A 615
            
Sbjct: 609 G 609



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 178/361 (49%), Gaps = 18/361 (4%)

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L NQM       +V +   ++N  CR+  +D +  +L +M+  G  P+ +++ A +NGLC
Sbjct: 115 LCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLC 174

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
           + GK  EA E+ N   +    PN I+Y+ V++GL + G  S A DV ++M + G  P  V
Sbjct: 175 NEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVV 234

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             + +I SLC++  ++ A +F+ E + +G   NV  + S++ GFC  G L EA  L  +M
Sbjct: 235 TYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM 294

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P+TVT+T ++D L K G V EA  +   M  KG+ P + TY  ++  YC    +
Sbjct: 295 VGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLM 354

Query: 566 EDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
            +  K+ E M+ K     A  YN +I   C    ++EA  +L ++   A   D  T   L
Sbjct: 355 NEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 414

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           ++     G P  A  +   M +    P+L     V+  ++L+G           F + GH
Sbjct: 415 MQGLCQLGRPKEALNLFKEMCSYGPHPNL-----VTYVILLDG-----------FCKHGH 458

Query: 684 I 684
           +
Sbjct: 459 L 459



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 195/405 (48%), Gaps = 18/405 (4%)

Query: 139 HDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRN 194
           H+P  I Y  ++  L KT     A  V + M + G  C+P   +Y  +  S  +   + +
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNG--CKPNVVTYSTIIDSLCKDRLVND 251

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           AM  LS M +  + PN+   N+ +H      +L +A R  + M    + PN +T+  L+ 
Sbjct: 252 AMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVD 311

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
           G C    + +A  + + M  KG  PD  +Y  +M   C ++ + E + + E M+      
Sbjct: 312 GLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAP 371

Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                    N +    R++EAK L+ +M      PD VTY+ ++ G C++G   +A  + 
Sbjct: 372 GAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLF 431

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           ++M  +G  PN V+Y   L+G C +G   EA +++ + +E+   PN + Y++++ G+   
Sbjct: 432 KEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIA 491

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           GKL  A ++  ++   G  P      ++I+ L +EG  D A    ++  + G   N  ++
Sbjct: 492 GKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSY 551

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
             +I+GF Q  D   A+ L+D+M   +   +  T+  ++D  S++
Sbjct: 552 NVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQD 596



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 137/275 (49%), Gaps = 2/275 (0%)

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           +D A     +M     +P+ V +  FL       +      + N  +    T N  + ++
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           +++ L R   +  +  V+ +M K G  P  +  N LI  LC EGK+  A +   E + +G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              NV+++T++I G C+ G+   A+ +   M      P+ VTY+TIID+L K+  V +A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENL 592
           E + +M+ +G+ P V TY +++H +C +G++ +  +L ++M+ +        +  +++ L
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           C  G + EA  +   +     + D ST + L++ Y
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGY 348


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 261/507 (51%), Gaps = 19/507 (3%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM-VAYSRAGK--LRNAMYVLS 200
           Y+ ++  L        A  VL  M RRG    P  +  ++  A SR G    R+A+ VL 
Sbjct: 118 YFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQ 177

Query: 201 MMQKAAVAPNLLICNTAIHVLV-VGNKLAKALRFLERMQLA-GITPNVLTYNCLIKGYCD 258
            +     A ++  CN  ++ +   G  + +ALR L  +  + G  P+V++YN ++KG C 
Sbjct: 178 DLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCM 237

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNL 313
             R      L++EM   GC P+ V++ T++GYLC+    + V  ++ +MV+     D  +
Sbjct: 238 AKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRM 297

Query: 314 FHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
           +         +G +E A E++++M   G  P+VV Y  V+ G C     +QA+++L +M+
Sbjct: 298 YATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMF 357

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
            + C  + V++   ++  C NG      E++    E    P+ ITY+ V++G  +EG + 
Sbjct: 358 DNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLID 417

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA  +++ M   G  P  +   ++++ LC   +   A+  M + + +GC+ N V F ++I
Sbjct: 418 EAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVI 477

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
              C+KG +E+A+ LL  M L    PD ++Y+T+ID L K G+ +EA EL+  M++KG+ 
Sbjct: 478 NFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 537

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKI 604
           P  + Y ++     + GR+  ++++ + +  ++ +     YN VI +LC  G  + A + 
Sbjct: 538 PNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEF 597

Query: 605 LGKVLRTASKADASTCHVLVESYLNKG 631
           L  ++ +    + ST  +L+    ++G
Sbjct: 598 LAYMVSSGCMPNESTYTILIRGLASEG 624



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 228/443 (51%), Gaps = 21/443 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMV-----AYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
           A R+LR +      C P+  SY  V        R G++++ M     M +    PN++  
Sbjct: 208 ALRLLRDLPT-SFGCDPDVVSYNAVLKGLCMAKRWGRVQDLM---EEMVRVGCPPNVVTF 263

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           NT I  L       +  + L +M   G TP++  Y  ++ G C    ++ A +++D MP 
Sbjct: 264 NTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS 323

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEE 322
            G  P+ V Y TV+  LC  +R ++  +L+ +M ++             + F   G +  
Sbjct: 324 YGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYR 383

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
             EL+ QM + GC+PDV+TYT V+NGFC+ G +D+A  +L+ M   GC+PNT+SYT  L 
Sbjct: 384 VIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLK 443

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC   + ++A ++++   E+  +PN +T++ V++ L ++G + +A +++++M+  G  P
Sbjct: 444 GLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSP 503

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             +  + +I  L + GK D A + +   +NKG + N + ++S+     ++G +   + + 
Sbjct: 504 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMF 563

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           D++       D V Y  +I +L K G  + A E +  M+S G +P   TY  +I      
Sbjct: 564 DNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASE 623

Query: 563 GRVEDLLKLLEKMLSKQKCRTAY 585
           G V++  ++L ++ SK   R  +
Sbjct: 624 GFVKEAQEMLTELCSKGALRKHF 646



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 217/464 (46%), Gaps = 24/464 (5%)

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
             +LA A R    +    + PN  TY  +++  C   RI DA+ ++DEM  +GC+P    
Sbjct: 96  AGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPM 152

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKM-----------VNDSNLFHDQ-----GRIEEAKELV 327
           Y+ ++   C        R  +  +           V + NL  +      G ++EA  L+
Sbjct: 153 YHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLL 212

Query: 328 NQM-SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
             + +  GC PDVV+Y AV+ G C      + + ++++M   GC PN V++   +  LC 
Sbjct: 213 RDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCR 272

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
           NG      +++    +   TP+   Y+ V+ G+ +EG L  A +++  M   G  P  V 
Sbjct: 273 NGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVC 332

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            N +++ LC   + + A++ + E  +  C ++ V F  L+  FCQ G +   + LL+ M 
Sbjct: 333 YNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQML 392

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                PD +TYTT+I+   K G ++EA  L+  M + G  P  ++Y  V+   C   R  
Sbjct: 393 EHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWV 452

Query: 567 DLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           D   L+ +M+ +Q C      +N VI  LC  G +E+A ++L ++L      D  +   +
Sbjct: 453 DAEDLMSQMI-EQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTV 511

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           ++     G    A ++   M N+ + P+  +   ++  L  EG+
Sbjct: 512 IDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGR 555



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 163/345 (47%), Gaps = 25/345 (7%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           DR   Y   P  + Y  +L+ L   +  + A+ +L  M           F+ L+  + + 
Sbjct: 319 DRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQN 378

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G +   + +L  M +    P+++   T I+       + +A+  L+ M   G  PN ++Y
Sbjct: 379 GLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISY 438

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             ++KG C   R  DA  L+ +M  +GCSP+ V++ TV+ +LCK                
Sbjct: 439 TIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCK---------------- 482

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                  +G +E+A EL+ QM   GC PD+++Y+ V++G  + G+ D+A ++L  M + G
Sbjct: 483 -------KGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 535

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PNT+ Y++  + L   G+     +M +  ++     +A+ Y+ V+  L + G    A 
Sbjct: 536 MSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAI 595

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           + +  MV  G  P      +LI+ L  EG +  A++ + E  +KG
Sbjct: 596 EFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 160/341 (46%), Gaps = 10/341 (2%)

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y A+V+G+CR G+L  A+++   +      PN  +Y   +  LC  G+  +A  +++   
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 402 EEWWTPNAITYSVVMHGL---RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                P    Y V++         G    A  V++++  +G        NL++ ++C +G
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 459 -KMDGAKKFMQECLNK-GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
             +D A + +++     GC  +VV++ ++++G C          L+++M      P+ VT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           + T+I  L +NG  E   +++ +M+  G  P +  Y TV+   C+ G +E   ++L++M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 577 SK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
           S   +     YN V++ LCS    E+A ++L ++       D  T ++LV+ +   G+  
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 635 LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
              ++  +M     +PD+     V      EG  +EA  L+
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLL 423



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 85/176 (48%), Gaps = 4/176 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           +P+ +  ++  L K  L + A  +L+ M   G  C P+  SY  V     +AGK   A+ 
Sbjct: 469 NPVTFNTVINFLCKKGLVEQAIELLKQMLLNG--CSPDLISYSTVIDGLGKAGKTDEALE 526

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L++M    ++PN +I ++    L    ++ + ++  + +Q   I  + + YN +I   C
Sbjct: 527 LLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLC 586

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
                  AI+ +  M   GC P++ +Y  ++  L  E  +KE ++++ ++ +   L
Sbjct: 587 KRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 642



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 103/242 (42%), Gaps = 10/242 (4%)

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N ++   CR G++  A++      +     N   +  ++R  C +G + +ALS+LD+M  
Sbjct: 87  NAMVSGYCRAGQLASARRLAA---SVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRR 143

Query: 508 CKKDPDTVTYTTIIDALSKNGR---VEEATELMMKMLSKGLVPTVVTYRTVIHRYC-QVG 563
               P    Y  I++A    G       A  ++  +  +G    V     V++  C Q G
Sbjct: 144 RGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGG 203

Query: 564 RVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
            V++ L+LL  + +   C     +YN V++ LC          ++ +++R     +  T 
Sbjct: 204 SVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTF 263

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
           + L+      G+    ++V  +M +    PD+++   V + +  EG  E A  ++ R   
Sbjct: 264 NTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS 323

Query: 681 RG 682
            G
Sbjct: 324 YG 325


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 171/615 (27%), Positives = 281/615 (45%), Gaps = 47/615 (7%)

Query: 76  PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA---DERVALQFFYWAD 132
           PL   VC L  LR             LL S  PR   ++++S A   +            
Sbjct: 101 PLPLLVCFLRALR-------------LLPSSPPRPFDSLIKSYASLPNRASLAAAALAFA 147

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R   Y    + Y  +L  LS   L   A+R    M   G+      ++ L+ A    G  
Sbjct: 148 RSAGYVPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHR 206

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
           + A+ +L  M+ A   PN++  NT +       ++  A R +  M+  G+ PN++T+N +
Sbjct: 207 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSM 266

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RDL 303
           + G C   +++DA K+ DEM  +G +PD VSY T++G  CK     E          + +
Sbjct: 267 VNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 326

Query: 304 MEKMVNDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
           M  +V  ++L H     G +E A  LV QM + G   + VT+TA+++GFC+ G LD A  
Sbjct: 327 MPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 386

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
            ++ M     KP+ V Y A +NG C  G+  EARE+++  E +   P+ +TYS ++    
Sbjct: 387 AVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 446

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +      A ++ ++M++KG  P  +  + LI+ LC E ++  A    +  +  G   +  
Sbjct: 447 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEF 506

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            +TSLI G C++G++E ALSL D M      PD VTY+ +I+ LSK+ R  EA +L+ K+
Sbjct: 507 TYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 566

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEE 600
             +  +P    Y  ++H  C+   ++ +L LL                 +  C  G + E
Sbjct: 567 YHEDPIPANTKYDALMH-CCRKAELKSVLALL-----------------KGFCMKGLMNE 608

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           A K+   +L      D S   VL+  +   G  + A     +M      P+      +  
Sbjct: 609 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIR 668

Query: 661 RLILEGKSEEADTLM 675
            L   G   EAD ++
Sbjct: 669 GLFENGMVVEADQVI 683



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 218/451 (48%), Gaps = 26/451 (5%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G  P+VL YN ++    D   +  A +  D M   G +P+  +Y  ++  LC        
Sbjct: 151 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALC-------- 201

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                           +G  +EA  ++  M   GC P+VVTY  +V  F R GE+D A++
Sbjct: 202 ---------------GRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAER 246

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           ++  M   G KPN V++ + +NG+C  GK  +AR++ +    E   P+ ++Y+ ++ G  
Sbjct: 247 LVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYC 306

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           + G   EA  V  EM +KG  P  V    LI  +C+ G ++ A   +++   +G  +N V
Sbjct: 307 KAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEV 366

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            FT+LI GFC+KG L++AL  +  M  C+  P  V Y  +I+     GR++EA EL+ +M
Sbjct: 367 TFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 426

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYL 598
            +KGL P VVTY T+I  YC+        +L ++ML K     A  Y+ +I  LC    L
Sbjct: 427 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRL 486

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
            +A  +   +++   + D  T   L++ +  +G    A  +  +M    ++PD+     +
Sbjct: 487 SDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVL 546

Query: 659 SERLILEGKSEEADTLMLRFVERGHIQPKSE 689
              L    ++ EA  L+ +      I   ++
Sbjct: 547 INGLSKSARAMEAQQLLFKLYHEDPIPANTK 577



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 223/482 (46%), Gaps = 66/482 (13%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +LR M  RG  C P   +Y  L+ A+ RAG++  A  ++ MM++  + PNL+  N+ 
Sbjct: 209 ALSILRDM--RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSM 266

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           ++ +    K+  A +  + M   G+ P+ ++YN L+ GYC      +A+ +  EM  KG 
Sbjct: 267 VNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 326

Query: 278 SPDKVSYYTVMGYLCK----EKRIKEVRDLMEKMVNDSNL--------FHDQGRIEEAKE 325
            PD V++ +++  +CK    E+ +  VR + E+ +  + +        F  +G +++A  
Sbjct: 327 MPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 386

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
            V  M Q    P VV Y A++NG+C VG +D+A+++L +M   G KP+ V+Y+  ++  C
Sbjct: 387 AVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 446

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            N  +  A E+     E+   P+AITYS ++  L  E +LS+A  + + M+K G  P   
Sbjct: 447 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEF 506

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT---------------------- 483
               LI   C+EG ++ A     + +  G   +VV ++                      
Sbjct: 507 TYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 566

Query: 484 ----------------------------SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
                                       +L++GFC KG + EA  +   M     + D  
Sbjct: 567 YHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGS 626

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            Y+ +I    + G V +A     +ML  G  P   +  ++I    + G V +  ++++++
Sbjct: 627 VYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 686

Query: 576 LS 577
           L+
Sbjct: 687 LN 688



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 213/480 (44%), Gaps = 66/480 (13%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           R+   + + + +  M+  + K    + A++V   M R G+   P+  SY  L+  Y +AG
Sbjct: 252 REGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLA--PDGVSYNTLVGGYCKAG 309

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG--------- 241
               A+ V + M +  + P+++   + IHV+     L +A+  + +M+  G         
Sbjct: 310 CSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFT 369

Query: 242 --------------------------ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
                                     I P+V+ YN LI GYC + R+ +A +L+ EM  K
Sbjct: 370 ALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK 429

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFH---DQGRIEEA 323
           G  PD V+Y T++   CK        +L ++M         +  S+L      + R+ +A
Sbjct: 430 GLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDA 489

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
             L   M ++G  PD  TYT++++G C+ G ++ A  +  +M   G  P+ V+Y+  +NG
Sbjct: 490 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLING 549

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR---------------EGKLSEA 428
           L  + +++EA++++     E   P    Y  +MH  R+               +G ++EA
Sbjct: 550 LSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEA 609

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             V + M+ + +       ++LI   CR G +  A  F ++ L  G A N  +  SLIRG
Sbjct: 610 DKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRG 669

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
             + G + EA  ++  +       D      +ID     G V+   +++  M   GL+P+
Sbjct: 670 LFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/339 (23%), Positives = 143/339 (42%), Gaps = 27/339 (7%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +Q R +   + Y  ++           A+ +L  M  +G++     +S ++ AY +    
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            +A  +   M +  V P+ +  ++ I VL    +L+ A    + M   G+ P+  TY  L
Sbjct: 452 HSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 511

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-- 310
           I G+C    ++ A+ L D+M   G  PD V+Y  ++  L K  R  E + L+ K+ ++  
Sbjct: 512 IDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDP 571

Query: 311 --SNLFHD-----------------------QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
             +N  +D                       +G + EA ++   M       D   Y+ +
Sbjct: 572 IPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVL 631

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G CR G + +A    +QM   G  PN+ S  + + GL  NG  +EA ++I        
Sbjct: 632 IHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCS 691

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             +A     ++     EG +    DV+  M K G  P+P
Sbjct: 692 LADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSP 730


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 254/519 (48%), Gaps = 14/519 (2%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L  L +T     A  +   + R GIE      + ++ A  +  K  N M+ LS M+   
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKG 287

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           V  +++  NT I+       + +A + L      G+ P +LTYN ++ G C + +   A 
Sbjct: 288 VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAK 347

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNL---F 314
            ++ EM   G +P+  +Y T++  +C+   I E +++ ++M         V+ S+L    
Sbjct: 348 DVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVL 407

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G + +A     +M + G +PD V YT +++GFCR G L  A KM  +M   GC  + 
Sbjct: 408 ARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDV 467

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y  FLNGLC      +A  + N   E    P+  T++ ++ G  ++G + +A ++   
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEA 527

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MV+    P  V  N LI   C+ G+M  AK+   + + K    + +++ +++ GFC  G 
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           L EAL+L D M      P+ VT  T+I    ++G + +A E + KM+S G++P   +Y T
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I  Y +   +E    L+ +M  +  Q     YN ++   C+ G ++EA ++L K++   
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              D +T   L+  ++++     A++    M  R L+PD
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 150/590 (25%), Positives = 263/590 (44%), Gaps = 43/590 (7%)

Query: 113 AVLRSQADERVALQFFYWADRQW-RYRHDPIVYYMMLEILSKTK-LCQGAKRVLRLMARR 170
            + R + D  + L+F       +  ++H       M+  L + + L +    +LR++ + 
Sbjct: 106 VLFRCRGDLHLGLKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKS 165

Query: 171 GIE----------------CRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
           G+                      +  L+  Y +A KLR       ++++  V+ ++  C
Sbjct: 166 GVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINAC 225

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N  +  LV    +  A      +   GI  NV T N ++   C   + ++ +  + +M  
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
           KG   D V+Y T++   C+E                       G +EEA +L+N  S  G
Sbjct: 286 KGVFADIVTYNTLINAYCRE-----------------------GLVEEAFQLLNSFSSRG 322

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P ++TY A++ G C++G+ D+AK +L +M   G  PN  +Y   L  +C     LEA+
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E+ +        P+ +++S ++  L R G L +A    REM + G  P  V   +LI   
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CR G +  A K   E L +GC ++VV + + + G C+K    +A  L ++M      PD 
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            T+TT+I    K+G +++A  L   M+   L P  VTY T+I  +C+ G +    +L + 
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562

Query: 575 MLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M+ K       +Y  V+   CS G L EA  +  ++L    + +  TC+ L++ Y   G 
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              AY+   +M +  +IPD      + +  + E   E+A  L+    +RG
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 221/437 (50%), Gaps = 23/437 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +L  L K      AK VL  M + G+      ++ L+V   R   +  A  +   
Sbjct: 328 LTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDE 387

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  V P+L+  ++ I VL     L +AL     M+ +GI P+ + Y  LI G+C    
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGA 447

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + DA+K+ DEM  +GC  D V+Y T +  LCK+K                 +F D     
Sbjct: 448 LSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKK-----------------MFAD----- 485

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A  L N+M + G +PD  T+T ++ G+C+ G +D+A  + + M     KP+ V+Y   +
Sbjct: 486 -ADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G C  G+   A+E+ +    +   P+ I+Y  V++G    G L EA ++  +M++KG  
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N LI+  CR G M  A +++ + ++ G   +  ++ +LI G+ ++ +LE+A  L
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFIL 664

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           +++M       + +TY  I++     G+++EA +++ KM+  G+ P   TY ++I+ +  
Sbjct: 665 INEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVS 724

Query: 562 VGRVEDLLKLLEKMLSK 578
              +++  +  ++ML +
Sbjct: 725 QDNMKEAFRFHDEMLQR 741



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 129/272 (47%), Gaps = 2/272 (0%)

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ GL R G +  A ++  E+V+ G       +N+++ +LC++ K +    F+ +   KG
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKG 287

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              ++V + +LI  +C++G +EEA  LL+       +P  +TY  I+  L K G+ + A 
Sbjct: 288 VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAK 347

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENL 592
           +++++ML  GL P   TY T++   C+   + +  ++ ++M  +       +++ +I  L
Sbjct: 348 DVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVL 407

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
              G+L +A     ++ R+    D     +L++ +   G    A K+   M  R    D+
Sbjct: 408 ARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDV 467

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
                    L  +    +AD L    VERG +
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMV 499



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 27/238 (11%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNA 195
           + D + Y  +++   K      AK +   M R+ I   P+  SY  V   +  +G L  A
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDI--IPDHISYGTVLNGFCSSGLLPEA 591

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + +   M +  + PNL+ CNT I        + KA  +L +M   GI P+  +YN LI G
Sbjct: 592 LNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           Y     ++ A  LI+EM  +G   + ++Y  ++   C E                     
Sbjct: 652 YLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAE--------------------- 690

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
             G+++EA++++ +M ++G  PD  TY++++NG      + +A +   +M   G  P+
Sbjct: 691 --GKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/503 (27%), Positives = 250/503 (49%), Gaps = 15/503 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y+ ++  L        A  VL  MARRG    P  +   + A  RA   R A+ VL  + 
Sbjct: 114 YFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLH 173

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA-GITPNVLTYNCLIKGYCDLHRI 262
               A ++  CN  +  +     + +A+R L  +  + G  P+V++YN +++G C   R 
Sbjct: 174 GRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRW 233

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFHD- 316
                L++EM   GC P+ V++ T++G+LC+    + V ++  +M       D  ++   
Sbjct: 234 GHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATI 293

Query: 317 ------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                 + R+E A+ ++N+M   G  P+VV Y  ++ G C     ++A+ +L +M+   C
Sbjct: 294 IDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDC 353

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
             + V++   ++ LC NG      E++    E    P+ ITY+ V++G  +EG + EA  
Sbjct: 354 PLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVM 413

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           ++R M   G  P  V   ++++ LC   +   A++ M + + +GC  N V F +LI   C
Sbjct: 414 LLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 473

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +KG +E+A+ LL  M +    PD ++Y+T+ID L K G  +EA EL+  M+ KG+ P  +
Sbjct: 474 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTI 533

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
            Y ++       GR+  ++++ E +   + +     YN VI +LC  G  + A + L  +
Sbjct: 534 IYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYM 593

Query: 609 LRTASKADASTCHVLVESYLNKG 631
           + +    + ST  +L+    ++G
Sbjct: 594 VSSGCVPNESTYTILIRGLASEG 616



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 245/480 (51%), Gaps = 15/480 (3%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL- 199
           P +Y++ LE   +    +GA  VLR +  RG        + ++ A    G +  A+ +L 
Sbjct: 146 PPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLR 205

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            ++      P+++  N  +  L +  +       +E M  AG  PN++T++ LI   C  
Sbjct: 206 DLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRN 265

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNL--- 313
              +   ++  +M   GC+PD   Y T++  +CKE+R++  R ++ +M +     N+   
Sbjct: 266 GLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCY 325

Query: 314 ------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                      R EEA+ L+ +M    C  D VT+  +V+  C+ G +D+  ++L+QM  
Sbjct: 326 NTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLE 385

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           HGC P+ ++YT  +NG C  G   EA  ++ +       PN ++Y++V+ GL    +  +
Sbjct: 386 HGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVD 445

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A +++ +M+++G  P PV  N LI  LC++G ++ A + +++ L  GC+ ++++++++I 
Sbjct: 446 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 505

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G  + G+ +EAL LL+ M      P+T+ Y++I  ALS  GR+ +  ++   +    +  
Sbjct: 506 GLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRS 565

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKIL 605
             V Y  VI   C+ G  +  ++ L  M+S       + Y  +I  L S G+++EA +IL
Sbjct: 566 DAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEIL 625



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 221/438 (50%), Gaps = 17/438 (3%)

Query: 160 AKRVLR-LMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
           A R+LR L+   G  C P+  SY  V      A +  +   ++  M  A   PN++  +T
Sbjct: 200 AVRLLRDLLPSFG--CEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFST 257

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            I  L       +      +M   G  P+V  Y  +I G C   R++ A  +++ MP  G
Sbjct: 258 LIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYG 317

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NLFHD----QGRIEEAK 324
            SP+ V Y T++  LC   R +E   L+ +M +          N+  D     G ++   
Sbjct: 318 LSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVI 377

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           E++ QM + GC+PDV+TYT V+NGFC+ G +D+A  +L+ M   GC+PNTVSYT  L GL
Sbjct: 378 EVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGL 437

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C   + ++A E+++   ++   PN +T++ +++ L ++G + +A +++++M+  G  P  
Sbjct: 438 CSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 497

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           +  + +I  L + G  D A + +   + KG + N + ++S+      +G + + + + ++
Sbjct: 498 ISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFEN 557

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           +       D V Y  +I +L K G  + A E +  M+S G VP   TY  +I      G 
Sbjct: 558 IQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGF 617

Query: 565 VEDLLKLLEKMLSKQKCR 582
           V++  ++L ++ SK   R
Sbjct: 618 VKEAQEILTELCSKGALR 635



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 207/445 (46%), Gaps = 84/445 (18%)

Query: 249 YNCLIKGYCDL--------------------------------HRIKDAIKLIDEMPLKG 276
           YN ++ GYC                                   RI DA+ ++D+M  +G
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRG 141

Query: 277 CSPDKVSYYTVMGYLCKEKRIKE----VRDLMEKM----VNDSNLFH----DQGRIEEAK 324
           C+P    Y+  +   C+    +     +RDL  +     V + NL      DQG ++EA 
Sbjct: 142 CAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAV 201

Query: 325 ELV-NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
            L+ + +   GC PDVV+Y AV+ G C        + ++++M   GC PN V+++  +  
Sbjct: 202 RLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGH 261

Query: 384 LCHNG----------------------------------KSLE-AREMINTSEEEWWTPN 408
           LC NG                                  + LE AR ++N       +PN
Sbjct: 262 LCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPN 321

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
            + Y+ ++ GL    +  EA  ++ EM  K      V  N+L+  LC+ G +D   + ++
Sbjct: 322 VVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLE 381

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           + L  GC  +V+ +T++I GFC++G ++EA+ LL  M  C   P+TV+YT ++  L    
Sbjct: 382 QMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAE 441

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AY 585
           R  +A ELM +M+ +G  P  VT+ T+I+  C+ G VE  ++LL++ML    C     +Y
Sbjct: 442 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV-NGCSPDLISY 500

Query: 586 NQVIENLCSFGYLEEAGKILGKVLR 610
           + VI+ L   G  +EA ++L  +++
Sbjct: 501 STVIDGLGKAGNTDEALELLNVMVK 525



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 160/345 (46%), Gaps = 25/345 (7%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           +R   Y   P  + Y  +L+ L      + A+ +L  M  +        F+ L+    + 
Sbjct: 311 NRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQN 370

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G +   + VL  M +    P+++   T I+       + +A+  L  M   G  PN ++Y
Sbjct: 371 GLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSY 430

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             ++KG C   R  DA +L+ +M  +GC P+ V++ T++ +LCK                
Sbjct: 431 TIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK---------------- 474

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                  +G +E+A EL+ QM   GC PD+++Y+ V++G  + G  D+A ++L  M   G
Sbjct: 475 -------KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKG 527

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PNT+ Y++  + L   G+  +  +M    ++     +A+ Y+ V+  L + G+   A 
Sbjct: 528 MSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAI 587

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           + +  MV  G  P      +LI+ L  EG +  A++ + E  +KG
Sbjct: 588 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 156/353 (44%), Gaps = 7/353 (1%)

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y A+V G+CR G   Q     +        PN  +Y   +  LC  G+  +A  +++   
Sbjct: 82  YNAMVAGYCRAG---QLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                P    Y V +    R      A  V+R++  +G        NL++Q++C +G +D
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 462 GAKKFMQECLNK-GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
            A + +++ L   GC  +VV++ +++RG C          L+++M      P+ VT++T+
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-- 578
           I  L +NG  E   E+  +M   G  P V  Y T+I   C+  R+E    +L +M S   
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
                 YN +++ LCS    EEA  +L ++       D  T ++LV+     G+     +
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
           V  +M     +PD+     V      EG  +EA  ++LR +     +P +  +
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEA-VMLLRSMAACGCRPNTVSY 430



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 85/176 (48%), Gaps = 4/176 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           +P+ +  ++  L K  L + A  +L+ M   G  C P+  SY  V     +AG    A+ 
Sbjct: 461 NPVTFNTLINFLCKKGLVEQAIELLKQMLVNG--CSPDLISYSTVIDGLGKAGNTDEALE 518

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L++M K  ++PN +I ++    L    ++ K ++  E +Q   +  + + YN +I   C
Sbjct: 519 LLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLC 578

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
                  AI+ +  M   GC P++ +Y  ++  L  E  +KE ++++ ++ +   L
Sbjct: 579 KRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGAL 634


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/510 (29%), Positives = 248/510 (48%), Gaps = 32/510 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K K    A ++ + MA RG+      ++ L+    + GK+  A  V 
Sbjct: 55  DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY 114

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M      P+++  +T I  L    ++  A+R  + M+  G+ PN + Y+ LI G C  
Sbjct: 115 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 174

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            ++  A++++ +M    C+PD ++Y  ++  LCK                        G 
Sbjct: 175 RKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCK-----------------------SGD 211

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML-QQMYHHGCKPNTVSYT 378
           +E A+   ++M + GC PDV TY  +++GFC+ G  D A   L Q+   +GC  +  +YT
Sbjct: 212 VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYT 271

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           A ++ L  N K  EA  ++        TP   TY+ +++GL + G+L EA D++R++V  
Sbjct: 272 AIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 331

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  V    LI  L +E +   A K  +E   +G A++ V +T+LIR   Q G + +A
Sbjct: 332 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQA 391

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
            S+   M      PD VT +T+ID LSK GR+  A  +   M ++GL P  V Y  +IH 
Sbjct: 392 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 451

Query: 559 YCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
            C+  +++  L++L +M  K  C      YN +I+ LC  G +E A     ++L    K 
Sbjct: 452 LCKARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 510

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           D  T ++L+  +   G        AC +F+
Sbjct: 511 DVYTYNILISGFCKAG----NTDAACGVFD 536



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 228/472 (48%), Gaps = 21/472 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
           D + Y  ++  L +T     A  V + M   G  C P+    S ++   S+AG++  A+ 
Sbjct: 90  DTVCYTALIRELLQTGKIPQASSVYKTMTSHG--CVPDVVTLSTMIDGLSKAGRIGAAVR 147

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M+   +APN ++ +  IH L    K+  AL  L +M+ A  TP+ +TYN LI G C
Sbjct: 148 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLC 207

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM--EKMVNDSNL-- 313
               ++ A    DEM   GC PD  +Y  ++   CK          +  E  +N   +  
Sbjct: 208 KSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDI 267

Query: 314 ---------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                         +IEEA  L+ +++  GC P + TY A++NG C++G L++A  +L++
Sbjct: 268 HTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRK 327

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           +  +GC P+ V+YT+ ++GL    +S EA ++           + + Y+ ++  L + GK
Sbjct: 328 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGK 387

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + +A  V + M   G  P  V ++ +I  L + G++  A +  +    +G A N V +++
Sbjct: 388 IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSA 447

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G C+   ++ AL +L  M      PDT+TY  +ID L K+G VE A     +ML  G
Sbjct: 448 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 507

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLC 593
             P V TY  +I  +C+ G  +    + + M S  +C      Y  +I  LC
Sbjct: 508 CKPDVYTYNILISGFCKAGNTDAACGVFDDM-SSSRCSANVVTYGALISGLC 558



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 221/441 (50%), Gaps = 15/441 (3%)

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           K+ +A+  +E++   G TP + TYN L+ G C + R+++AI L+ ++   GC+PD V+Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 286 TVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQM 333
           +++  L KEKR  E   L ++M         V  + L  +    G+I +A  +   M+  
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           GC+PDVVT + +++G  + G +  A ++ + M   G  PN V Y+A ++GLC   K   A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            EM+   ++ + TP+ ITY+V++ GL + G +  A     EM++ G  P     N+LI  
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 454 LCREGKMDGAK-KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            C+ G  D A     QE    GC +++  +T+++    +   +EEA++L++ +      P
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
              TY  +++ L K GR+EEA +L+ K++  G  P VVTY ++I    +  R  +  KL 
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360

Query: 573 EKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           ++M  +        Y  +I  L   G + +A  +   +       D  T   +++     
Sbjct: 361 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 420

Query: 631 GIPLLAYKVACRMFNRNLIPD 651
           G    A ++   M  R L P+
Sbjct: 421 GRIGAAVRIFKSMEARGLAPN 441



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 209/453 (46%), Gaps = 48/453 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D +    M++ LSK      A R+ + M  RG+      +S L+    +A K+  A+ +L
Sbjct: 125 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 184

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M+KA   P+ +  N  I  L     +  A  F + M  AG  P+V TYN LI G+C  
Sbjct: 185 AQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKA 244

Query: 260 HRIKDAI-KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
                A   L  E  + GC+ D  +Y  ++ +L K K+I+E   LMEK+  +        
Sbjct: 245 GNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIAT 304

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR--------------- 351
                N     GR+EEA +L+ ++   GC PDVVTYT++++G  +               
Sbjct: 305 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 364

Query: 352 --------------------VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
                                G++ QA  + + M  HGC P+ V+ +  ++GL   G+  
Sbjct: 365 LRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG 424

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
            A  +  + E     PN + YS ++HGL +  K+  A +++ +M K    P  +  N+LI
Sbjct: 425 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 484

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LC+ G ++ A+ F  E L  GC  +V  +  LI GFC+ G+ + A  + DDM   +  
Sbjct: 485 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCS 544

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
            + VTY  +I  L K  ++ +A+     M  +G
Sbjct: 545 ANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 200/431 (46%), Gaps = 63/431 (14%)

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
           +I++A+ L++++   GC+P   +Y  ++  LCK  R++E  DL+ K+V++          
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN---------- 50

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCR----------------------------- 351
                        GC PDVVTYT++++G  +                             
Sbjct: 51  -------------GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTAL 97

Query: 352 ------VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
                  G++ QA  + + M  HGC P+ V+ +  ++GL   G+   A  +  + E    
Sbjct: 98  IRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL 157

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            PN + YS ++HGL +  K+  A +++ +M K    P  +  N+LI  LC+ G ++ A+ 
Sbjct: 158 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARA 217

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL-SLLDDMYLCKKDPDTVTYTTIIDAL 524
           F  E L  GC  +V  +  LI GFC+ G+ + A  SL  +  +     D  TYT I+D L
Sbjct: 218 FFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWL 277

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR-- 582
           +KN ++EEA  LM K+ + G  PT+ TY  +++  C++GR+E+ + LL K++    C   
Sbjct: 278 AKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NGCTPD 336

Query: 583 -TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              Y  +I+ L       EA K+  ++       D      L+   L  G    A  V  
Sbjct: 337 VVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYK 396

Query: 642 RMFNRNLIPDL 652
            M +   +PD+
Sbjct: 397 TMTSHGCVPDV 407



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 188/404 (46%), Gaps = 38/404 (9%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           +IEEA  L+ +++  GC P + TY A++NG C++G L++A  +L+++  +GC P+ V+YT
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           + ++GL    +S EA ++           + + Y+ ++  L + GK+ +A  V + M   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  V ++ +I  L + G++  A +  +    +G A N V +++LI G C+   ++ A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L +L  M      PDT+TY  +ID L K+G VE A     +ML  G  P V TY  +I  
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 559 YCQVG------------------------------------RVEDLLKLLEKMLSKQKCR 582
           +C+ G                                    ++E+ + L+EK+ +     
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300

Query: 583 T--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
           T   YN ++  LC  G LEEA  +L K++      D  T   L++    +     AYK+ 
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
             M  R L  D      +   L+  GK  +A ++       G +
Sbjct: 361 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 404


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 165/635 (25%), Positives = 282/635 (44%), Gaps = 66/635 (10%)

Query: 87  LRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYM 146
           LR  W     G LR    +    Q+   LR Q D   AL+    A  +  +   P VY  
Sbjct: 24  LRPRWRASRHGPLR----AAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEE 79

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM-YVLSMMQKA 205
           ++  L         K ++  M R G + +       + +Y       +A+  +L+ +Q  
Sbjct: 80  IIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL 139

Query: 206 -AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
             +  + ++ N  ++VLV G+K+         M   GI P+V+T+N L+K  C  H+++ 
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAK 324
           A+ +++EM  +G +PD+ ++ T+M                         F ++G IE A 
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLM-----------------------QGFVEEGSIEAAL 236

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            +  +M +MGC    VT   ++NG+C++G ++ A   +QQ    G +P+ ++Y  F+NGL
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG--------------------- 423
           C N     A ++++   +E   P+  TY++V++ L + G                     
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356

Query: 424 --------------KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
                         +L EA D+ R++  KG  P     N+LI +LC+ G    A +  +E
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
             N GC  + V + +LI   C  G L +AL LL DM        T+TY TIID L K  R
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
           +EEA E+  +M  +G+    +T+ T+I   C+  +++D   L+ +M+S+  Q     YN 
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNS 536

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           ++ + C  G +++A  IL  +     + D  T   L+      G   +A KV   M  + 
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           + P  K    V + L       +A +L     E G
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 261/546 (47%), Gaps = 56/546 (10%)

Query: 140 DPIVYYMMLEIL---SKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           D +VY  +L +L   SK KL +    V   M  RGI+     F+ LM A  RA ++R A+
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLES---VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M    VAP+     T +   V    +  ALR   RM   G +   +T N LI GY
Sbjct: 202 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV---NDSNL 313
           C L R++DA+  I +    G  PD+++Y T +  LC+   +     +M+ MV   +D ++
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 314 FH---------DQGRIEEAKELVNQMSQMGCIPDVVTY---------------------- 342
           F            G++EEAK ++NQM   GC+PD+ T+                      
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381

Query: 343 -------------TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
                          ++N  C+VG+   A ++ ++M + GC P+ V+Y   ++ LC  GK
Sbjct: 382 VTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A +++   E      + ITY+ ++ GL ++ ++ EA +V  +M  +G     +  N 
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 501

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI  LC++ K+D A   + + +++G   N + + S++  +C++GD+++A  +L+ M    
Sbjct: 502 LIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
            + D VTY T+I+ L K GR + A +++  M  KG+ PT   Y  V+    +   + D L
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621

Query: 570 KLLEKM--LSKQKCRTAYNQVIENLC-SFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            L  +M  + +      Y  V   LC   G ++EA   + +++      + S+  +L E 
Sbjct: 622 SLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681

Query: 627 YLNKGI 632
            LN G+
Sbjct: 682 LLNLGM 687



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 159/324 (49%), Gaps = 18/324 (5%)

Query: 156 LCQG-----AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           LC G     A  + R +  +G+      F+ L+ A  + G    A+ +   M+ +   P+
Sbjct: 366 LCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD 425

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
            +  NT I  L    KL KAL  L+ M+  G   + +TYN +I G C   RI++A ++ D
Sbjct: 426 EVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN----------DSNLFH--DQG 318
           +M L+G S + +++ T++  LCK+K+I +   L+ +M++          +S L H   QG
Sbjct: 486 QMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQG 545

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
            I++A +++  M+  G   DVVTY  ++NG C+ G    A K+L+ M   G +P   +Y 
Sbjct: 546 DIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYN 605

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL-RREGKLSEACDVVREMVK 437
             L  L       +A  +     E    P+A+TY +V  GL R  G + EA D + EMV 
Sbjct: 606 PVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVD 665

Query: 438 KGFFPTPVEINLLIQSLCREGKMD 461
           KGF P      +L + L   G  D
Sbjct: 666 KGFIPEFSSFRMLAEGLLNLGMDD 689


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 157/583 (26%), Positives = 275/583 (47%), Gaps = 35/583 (6%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR 165
           L P+ + AVL+ Q D   AL  F    ++  ++H  + Y  M+E L         +RVL 
Sbjct: 5   LLPKHVAAVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLM 64

Query: 166 LMARRGIECRPEAFSYL--MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
            M R  ++       Y+  M  Y R GK++ A+ V   M      P++   N  +++LV 
Sbjct: 65  EM-RLNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVE 123

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
                +A +   RM+  GI P+V T+   IK +C   R   A++L++ MP +GC  + V 
Sbjct: 124 YGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVV 183

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           Y TV+                       + F+++    EA EL N+M ++G  P + T+ 
Sbjct: 184 YCTVI-----------------------SGFYEENYQVEAYELFNKMLRLGIFPHIATFN 220

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG-------KSLEAREM 396
            +++  C+ G L + +K+L ++  +G  PN  ++  F+ GLC  G       K +EA   
Sbjct: 221 KLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENY 280

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           ++    +   P+  TY+ +++G  + GK+ +A  ++++   KGF P       LI  +C+
Sbjct: 281 LHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQ 340

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           +G +D A    +E L KG   ++V + +LI+G  Q+G + +AL L++DM      PD  T
Sbjct: 341 DGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWT 400

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y  +I+ L K G V +A  L+   ++KG +P + T+ T+I  YC+  ++++ + +L+ M 
Sbjct: 401 YNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMW 460

Query: 577 SKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
           S         YN ++  LC     E+  +    ++      +  T ++L+ES        
Sbjct: 461 SHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVT 520

Query: 635 LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLR 677
            A  +   + NR LIPD      V       G  +EA  L  R
Sbjct: 521 EALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRR 563



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 224/472 (47%), Gaps = 55/472 (11%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +   M R GI      F+ LM    + G L+    +L+ + K  V PNL   N  I 
Sbjct: 200 AYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQ 259

Query: 220 VLV-------VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
            L          +K+ +A  +L +M   G+ P+  TYN +I GY  + +I+DA +++ + 
Sbjct: 260 GLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDA 319

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME----KMVNDSNLFHD--------QGRI 320
             KG  PD+ +Y +++  +C++  I     L E    K +  S + ++        QG +
Sbjct: 320 KFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLV 379

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            +A +L+N MS+ G  PD+ TY  V+NG C++G +  A  +L      G  P+  ++   
Sbjct: 380 LKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTL 439

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++G C   K   A  ++++      TP+ ITY+ +++GL +  K  +  +  + +++KG 
Sbjct: 440 IDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGC 499

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  +  N+LI+SLC+  K+  A   ++E  N+G   + V+F ++I GFC  GDL+EA  
Sbjct: 500 LPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQ 559

Query: 501 LLD--------------------------DMYLCKK----------DPDTVTYTTIIDAL 524
           L                            DM + +K          DPD+ TY  +ID  
Sbjct: 560 LFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGF 619

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
            K G V    + ++K +  G VP++ T+  VI+  C   RV + + ++  M+
Sbjct: 620 CKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMV 671



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 198/437 (45%), Gaps = 31/437 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  ++   SK    Q A R+L+    +G    P+ F+Y  L++   + G + +A+ 
Sbjct: 292 DDFTYNTIIYGYSKVGKIQDASRILKDAKFKGF--VPDEFTYCSLIIGVCQDGDIDHALA 349

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +        + P++++ NT I  L     + KAL+ +  M   G++P++ TYN +I G C
Sbjct: 350 LFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLC 409

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
            +  + DA  L++    KG  PD  ++ T++   C  KR+K                   
Sbjct: 410 KMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYC--KRLK------------------- 448

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
             ++ A  +++ M   G  PDV+TY +++NG C+  + +   +  + +   GC PN ++Y
Sbjct: 449 --MDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITY 506

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              +  LC   K  EA +++         P+ +++  V+ G    G L EA  + R M +
Sbjct: 507 NILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQ 566

Query: 438 K-GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +     T    N++I +   +  MD A+K   E  +KGC  +   +  +I GFC+ G++ 
Sbjct: 567 QYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVN 626

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP-TVVTYRTV 555
                L         P   T+  +I+ L    RV EA  ++  M+  G+VP  VVT    
Sbjct: 627 SGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVTIFDA 686

Query: 556 IHRYCQVGR--VEDLLK 570
             +     +  VEDLLK
Sbjct: 687 DKKAVAAPKIIVEDLLK 703


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 163/596 (27%), Positives = 289/596 (48%), Gaps = 57/596 (9%)

Query: 114 VLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIE 173
           VLR        ++ F W  RQ  Y+H    Y   L+ L+K    Q A    + M RRG  
Sbjct: 11  VLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYP 70

Query: 174 CRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
             P+ F+Y +V     +AG+L  A  +L  ++++ V  N++  +  I      +++  AL
Sbjct: 71  --PDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDAL 128

Query: 232 RFLERMQL-AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
              + M    G  P+V+T+N L+KG C   R+ +A  L + M   GC P+ +SY T++  
Sbjct: 129 EIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDG 188

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LCK                        GR++EA  L  +M +  C+PD+V YT+ V G C
Sbjct: 189 LCK-----------------------AGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLC 225

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR--------------EM 396
           +   + +A    ++M   G K + V+++  +  LC  G + EA+              E 
Sbjct: 226 KANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEA 285

Query: 397 INTSEE---EWWTPNAITYSVVMHGLRREGKLSEACDVVREM--VKKGFFPTPVEI-NLL 450
             T EE       P+A  ++ ++H + +  +L +   + + M  +K+ + P  +E  N++
Sbjct: 286 CKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIM 345

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           + +LC+  ++D A++ + E  N G + +VV +++L+ G C+ G L+ A  LL++M     
Sbjct: 346 VDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGV 405

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            PD+ T  +I++ALSK G+V+ A   +  M ++G  P +VTY T++   C+ GR+++ + 
Sbjct: 406 FPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAIT 465

Query: 571 LLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            L KM++  KC     +Y  +I  LC  G    A  I  ++++     D    H L++  
Sbjct: 466 FLAKMVA-AKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGL 524

Query: 628 LNKGIPLLAYKVACRMFNRNLI-PDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              G+  LA +    +   +L  PD  + K V + L   GK+E+A  ++ R  + G
Sbjct: 525 ARNGLEDLALE----LLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAG 576



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 231/510 (45%), Gaps = 73/510 (14%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAG 190
           R+   + + I Y ++++   K      A  + + M+  G  C P+   F+ L+       
Sbjct: 100 RESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGG-GCVPDVVTFNSLLKGLCSGE 158

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           ++  A  +   M KA   PN++  +T +  L    +L +A R  E M      P+++ Y 
Sbjct: 159 RMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL------------------- 291
             + G C  +R+ +A     +M  KG   D V++ TV+G L                   
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCR 278

Query: 292 ---------------------------------CKEKRIKEVRDLMEKM----------- 307
                                            CK KR+ +   L ++M           
Sbjct: 279 SGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPN 338

Query: 308 VNDSNLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
           +   N+  D      +++EA+ELVN+M+  G  PDVVTY+A+V+G C++G+LD+A  +L+
Sbjct: 339 LETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLE 398

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   G  P++ +  + LN L   GK   A   + T +    TP+ +TY+ ++ GL + G
Sbjct: 399 EMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAG 458

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           ++ EA   + +MV     P      ++I +LCR G+  GA    QE + +G   + V + 
Sbjct: 459 RIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYH 518

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           SL+ G  + G  + AL LL    LCK  PD V +  ++D L K G+ E+A E++ +M   
Sbjct: 519 SLLDGLARNGLEDLALELLK-TSLCK--PDFVMHKMVLDGLCKAGKAEDACEVVERMADA 575

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
           G      TY +V+    ++G+V+   +L++
Sbjct: 576 GFPADAFTYISVVSGLRKLGKVDKARQLVD 605



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 161/338 (47%), Gaps = 18/338 (5%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV---LSMMQ 203
           M+E L ++ +   A +    M  R      E F+ L+ A  ++ +L + + +   +  M+
Sbjct: 272 MIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK 331

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           +    PNL   N  +  L    +L +A   +  M   G++P+V+TY+ L+ G C L ++ 
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLD 391

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLF 314
            A  L++EM  +G  PD  +  +++  L K  ++      +E M         V  + L 
Sbjct: 392 RACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLL 451

Query: 315 HD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 GRI+EA   + +M    C PDV +YT ++   CR G+   A  + Q+M   G  
Sbjct: 452 DGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVL 511

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+TV Y + L+GL  NG    A E++ TS      P+ + + +V+ GL + GK  +AC+V
Sbjct: 512 PDTVLYHSLLDGLARNGLEDLALELLKTS---LCKPDFVMHKMVLDGLCKAGKAEDACEV 568

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           V  M   GF         ++  L + GK+D A++ + +
Sbjct: 569 VERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDD 606



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 3/144 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++  L ++    GA  + + M +RG+      +  L+   +R G L +    L
Sbjct: 478 DVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNG-LED--LAL 534

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +++ +   P+ ++    +  L    K   A   +ERM  AG   +  TY  ++ G   L
Sbjct: 535 ELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKL 594

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVS 283
            ++  A +L+D+      S +++S
Sbjct: 595 GKVDKARQLVDDASETHTSVERLS 618


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 244/466 (52%), Gaps = 33/466 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  +++ L K      A+ +   M  + +EC P   +Y  L+    R GKL  AM + 
Sbjct: 11  VTYNSLIDGLCKNNEPDRAQELFEHM--KSVECSPSMVTYNTLLDGLFRTGKLERAMALF 68

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M     + +++  N  +  L    K+  AL F  +M     +PNV+TY+ LI G C  
Sbjct: 69  QEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSVLIDGLCKA 126

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           +R+  A++L++ M  +GCSPD ++Y  ++  LCKE ++                      
Sbjct: 127 NRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA-------------------- 166

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
              A E++ +M   GC+P++VTY ++++G CR   +  A  +++ M   GC PN V+Y  
Sbjct: 167 ---AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 223

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++GLC  G+  +A  M+    ++  TP+ + Y+++++GL +  ++ E+  ++R  V  G
Sbjct: 224 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 283

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  V  + +I  LCR  ++D A + +    ++GC  +V+ +++LI G C+ G ++EA 
Sbjct: 284 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 343

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            L + M     D D VTY+T+ID L K GRV+EA  L+ +M+  G  P+ +TY ++I   
Sbjct: 344 DLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAG 602
           C +  +++ ++L+E+M  +  C  +   YN +I  +C    ++ A 
Sbjct: 404 CDLNHLDEAIELVEEM-ERSNCAPSAVTYNILIHGMCRMERVDSAA 448



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 256/494 (51%), Gaps = 24/494 (4%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+     PN++  N+ I  L   N+  +A    E M+    +P+++TYN L+ G     +
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-------VNDSNLF 314
           ++ A+ L  EM L   S D +S+  ++  LC+  +I+   +   KM       V   ++ 
Sbjct: 61  LERAMALFQEM-LDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVL 119

Query: 315 HD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            D      R+ +A EL+  M   GC PDV+TYT +V+G C+  ++  A ++L++M   GC
Sbjct: 120 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 179

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PN V+Y + L+GLC   +  +A  ++        TPN +TY  ++ GL + G++ +AC 
Sbjct: 180 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           ++ +M+ KG  P  +  N+LI  LC+  ++D +   ++  ++ G   +VV ++S+I G C
Sbjct: 240 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 299

Query: 491 QKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +   L+EA  LL  +Y+  +   PD + Y+T+ID L K G+V+EA +L   M   G    
Sbjct: 300 RSNRLDEACRLL--LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDAD 357

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILG 606
           VVTY T+I   C+ GRV++   LL +M  +        YN +I+ LC   +L+EA +++ 
Sbjct: 358 VVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 417

Query: 607 KVLRTASKADASTCHVLVESYLN-KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
           ++ R+     A T ++L+      + +   A      M +  +IPD      ++  ++LE
Sbjct: 418 EMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPD-----HITYSILLE 472

Query: 666 GKSEEADTLMLRFV 679
           G  +  D   LR +
Sbjct: 473 GLKKSKDLHELRHL 486



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 220/444 (49%), Gaps = 21/444 (4%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGI 172
            + R+   ER    F    DR+    HD I + +++  L +    + A    R M  R  
Sbjct: 54  GLFRTGKLERAMALFQEMLDRR---SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-- 108

Query: 173 ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
            C P   +Y  L+    +A ++  A+ +L  M+    +P+++     +  L   +K+A A
Sbjct: 109 -CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 167

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
              L  M  AG  PN++TYN L+ G C   R+ DA+ L+ +M  +GC+P+ V+Y T++  
Sbjct: 168 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 227

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
           LCK  R+K+   ++  M++              N      +++E+  L+ +    G  PD
Sbjct: 228 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 287

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           VVTY++V+ G CR   LD+A ++L  +   GC P+ + Y+  ++GLC  GK  EA ++  
Sbjct: 288 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 347

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
               +    + +TYS ++ GL + G++ EA  ++  MV+ G  P+ +  N LI+ LC   
Sbjct: 348 VMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLN 407

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA-LSLLDDMYLCKKDPDTVTY 517
            +D A + ++E     CA + V +  LI G C+   ++ A L    +M      PD +TY
Sbjct: 408 HLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITY 467

Query: 518 TTIIDALSKNGRVEEATELMMKML 541
           + +++ L K+  + E   L++  +
Sbjct: 468 SILLEGLKKSKDLHELRHLVLDQM 491



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 169/329 (51%), Gaps = 22/329 (6%)

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M  HGC+PN V+Y + ++GLC N +   A+E+    +    +P+ +TY+ ++ GL R GK
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L  A  + +EM+ +      +  N+L+  LCR GK++ A +F ++ ++  C+ NV+ ++ 
Sbjct: 61  LERAMALFQEMLDRRSHDV-ISFNILVTGLCRAGKIETALEFFRK-MDDRCSPNVITYSV 118

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G C+   + +A+ LL+ M      PD +TYT ++D L K  +V  A E++ +ML  G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR------TAYNQVIENLCSFGYL 598
            VP +VTY +++H  C+  RV D L L+  M     CR        Y  +I+ LC  G +
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDM----TCRGCTPNVVTYGTLIDGLCKVGRV 234

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESY-----LNKGIPLLAYKVACRMFNRNLIPDLK 653
           ++A  +L  ++      D    ++L+        +++ I LL      R  +  + PD+ 
Sbjct: 235 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR-----RAVSGGIKPDVV 289

Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERG 682
               V   L    + +EA  L+L    RG
Sbjct: 290 TYSSVIYGLCRSNRLDEACRLLLYVKSRG 318



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 167/319 (52%), Gaps = 26/319 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  +L  L + +    A  ++R M  RG  C P   +Y  L+    + G++++A  +L
Sbjct: 184 VTYNSLLHGLCRARRVSDALALMRDMTCRG--CTPNVVTYGTLIDGLCKVGRVKDACAML 241

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M      P+L+I N  I+ L   +++ +++  L R    GI P+V+TY+ +I G C  
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 301

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND--------- 310
           +R+ +A +L+  +  +GC PD + Y T++  LCK  ++ E  DL E M  D         
Sbjct: 302 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTY 361

Query: 311 SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           S L       GR++EA  L+ +M +MG  P  +TY +++ G C +  LD+A +++++M  
Sbjct: 362 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMER 421

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEA-----REMINTSEEEWWTPNAITYSVVMHGLRRE 422
             C P+ V+Y   ++G+C   +   A     +EMI+        P+ ITYS+++ GL++ 
Sbjct: 422 SNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNG----VIPDHITYSILLEGLKKS 477

Query: 423 GKLSEACD-VVREMVKKGF 440
             L E    V+ +MV+ G+
Sbjct: 478 KDLHELRHLVLDQMVQLGY 496



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 30/255 (11%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           Q DE +AL            + D + Y  ++  L ++     A R+L  +  RG  C P+
Sbjct: 268 QVDESIAL---LRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG--CPPD 322

Query: 178 A--FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
              +S L+    +AGK+  A  +  +M       +++  +T I  L    ++ +A   L 
Sbjct: 323 VILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 382

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
           RM   G  P+ +TYN LIKG CDL+ + +AI+L++EM    C+P  V+Y  ++  +C+ +
Sbjct: 383 RMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRME 442

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           R+                  D   ++  +E+++     G IPD +TY+ ++ G  +  +L
Sbjct: 443 RV------------------DSAALDYFQEMIDN----GVIPDHITYSILLEGLKKSKDL 480

Query: 356 DQAKKM-LQQMYHHG 369
            + + + L QM   G
Sbjct: 481 HELRHLVLDQMVQLG 495


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 176/661 (26%), Positives = 309/661 (46%), Gaps = 32/661 (4%)

Query: 60  REEIRRVVLEEDEFRHPLVREVCRLIELRSAWSP-KLEGELRNLLRSLKPRQICAVLRSQ 118
           RE +R   L  D+ RH L  E   L+  R A +P +   EL + L    P   C  + + 
Sbjct: 114 RERLRSGTLGPDDARH-LFDE---LLLRRDAPAPARGLNELLSALARAPPSAACRDVPA- 168

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYY--MMLEILSKTKLCQGAKRVLRLMARRGIECRP 176
               +A++ F   DR       P +Y   +++    + +       V   + R G+   P
Sbjct: 169 ----LAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLG--P 222

Query: 177 EAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
           + FSY  L+  +S+ G++  A  +   M++  + PN++  ++ I+ L    ++ KA R L
Sbjct: 223 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVL 282

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
            +M  AG+ PN +TYNCLI GY      K+++++  EM      PD  +  + M  LCK 
Sbjct: 283 RQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKH 342

Query: 295 KRIKEVRDLMEKMV---------NDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTY 342
            RIKE RD+ + MV         +   L H     G I     L N M   G +PD   +
Sbjct: 343 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 402

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             ++N + R+G +D++  M + M   G  P+ ++++  ++  C  G+  +A E  N   +
Sbjct: 403 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 462

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE-INLLIQSLCREGKMD 461
               P+   YS ++ G      L +A +++ +M+ KG  P  ++    +I +LC+EG++ 
Sbjct: 463 TGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVA 522

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
             K  +   ++ G   N++ F SL+ G+C  G+++EA+ LLD M     +PD  TY T++
Sbjct: 523 EGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 582

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           D   K+GR+++A  L   ML K +  T V+Y  ++H   Q  R     ++  +M+     
Sbjct: 583 DGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMA 642

Query: 582 RT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
            +   Y  V+  LC     +EA  +L K+     K D  T ++++ +    G    A ++
Sbjct: 643 VSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKEL 702

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVFL 699
              +    L+P +   + +   LI E   E+AD L    +E+    P S    +  R+ L
Sbjct: 703 FAAISTYGLVPTILTYRVMITNLIKEESFEDADNL-FSSMEKSSCTPDSRILNEIIRMLL 761

Query: 700 N 700
           N
Sbjct: 762 N 762



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/537 (24%), Positives = 255/537 (47%), Gaps = 58/537 (10%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  ++  L KTK    A+RVLR M   G+  RP   +Y  L+  YS +G  + ++ V 
Sbjct: 260 VTYSSLINGLCKTKEMDKAERVLRQMVGAGV--RPNNMTYNCLIHGYSTSGMWKESVRVF 317

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY---------- 249
             M  + + P++  CN+ +  L    ++ +A    + M L G  P+V++Y          
Sbjct: 318 KEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATA 377

Query: 250 -------------------------NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
                                    N LI  Y  L  +  ++ + ++M  +G +PD +++
Sbjct: 378 GCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITF 437

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD--------QGR-----IEEAKELVNQMS 331
            TV+   C+  R+ +  +    M+ D+ +  D        QG+     + +AKEL++ M 
Sbjct: 438 STVISAFCRLGRLDDAMEKFNHMI-DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDML 496

Query: 332 QMGCIPDVVTY-TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
             G  P  + + T+++N  C+ G + + K ++  + H G +PN +++ + ++G C  G  
Sbjct: 497 SKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNM 556

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA  ++++ E     P+  TY+ ++ G  + G++ +A  + R+M+ K    T V  N++
Sbjct: 557 KEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNII 616

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           +  L +  +   AK+   E +  G AV++  + +++ G C+    +EA  LL+ ++    
Sbjct: 617 LHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNV 676

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
             D +T+  +I A+ K GR +EA EL   + + GLVPT++TYR +I    +    ED   
Sbjct: 677 KFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADN 736

Query: 571 LLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           L   M  K  C       N++I  L + G + +AG  L K+ +     +A+T  +L+
Sbjct: 737 LFSSM-EKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 792



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 209/450 (46%), Gaps = 13/450 (2%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D I Y  +L   +      G   +  +M   G+      F+ L+ AY+R G +  ++ 
Sbjct: 361 KPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLL 420

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M K  V P+++  +T I       +L  A+     M   G+ P+   Y+CLI+G C
Sbjct: 421 MFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQC 480

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYT-VMGYLCKEKRIKEVRDLMEKMVNDS----- 311
           +   +  A +LI +M  KG  P  + ++T ++  LCKE R+ E +D+++ +++       
Sbjct: 481 NRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNL 540

Query: 312 ---NLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
              N   D     G ++EA  L++ M  +G  PD+ TY  +V+G+C+ G +D A  + + 
Sbjct: 541 ITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRD 600

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M H      +VSY   L+GL    +++ A+EM +   E     +  TY+ V+ GL R   
Sbjct: 601 MLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNC 660

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             EA  ++ ++         +  N++I+++ + G+   AK+        G    ++ +  
Sbjct: 661 TDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRV 720

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +I    ++   E+A +L   M      PD+     II  L   G V +A   + K+  KG
Sbjct: 721 MITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKG 780

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           ++P   T   +I+ +   G+  + +KLL +
Sbjct: 781 ILPEATTTSLLIYLFSVNGKYREYIKLLPE 810



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 164/388 (42%), Gaps = 48/388 (12%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M ++G+      FS ++ A+ R G+L +AM   + M    V P+  + +  I        
Sbjct: 425 MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRD 484

Query: 227 LAKALRFLERMQLAGITP------------------------------------NVLTYN 250
           L KA   +  M   GI P                                    N++T+N
Sbjct: 485 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFN 544

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEK 306
            L+ GYC +  +K+A+ L+D M   G  PD  +Y T++   CK  RI +     RD++ K
Sbjct: 545 SLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHK 604

Query: 307 MVNDSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
            V  +++ ++          R   AKE+ ++M + G    + TY  V+ G CR    D+A
Sbjct: 605 RVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEA 664

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L++++    K + +++   +  +   G+  EA+E+          P  +TY V++  
Sbjct: 665 NMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITN 724

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L +E    +A ++   M K    P    +N +I+ L  +G++  A  ++ +   KG    
Sbjct: 725 LIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPE 784

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMY 506
               + LI  F   G   E + LL + Y
Sbjct: 785 ATTTSLLIYLFSVNGKYREYIKLLPEKY 812


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 176/661 (26%), Positives = 309/661 (46%), Gaps = 32/661 (4%)

Query: 60  REEIRRVVLEEDEFRHPLVREVCRLIELRSAWSP-KLEGELRNLLRSLKPRQICAVLRSQ 118
           RE +R   L  D+ RH L  E   L+  R A +P +   EL + L    P   C  + + 
Sbjct: 43  RERLRSGTLGPDDARH-LFDE---LLLRRDAPAPARGLNELLSALARAPPSAACRDVPA- 97

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYY--MMLEILSKTKLCQGAKRVLRLMARRGIECRP 176
               +A++ F   DR       P +Y   +++    + +       V   + R G+   P
Sbjct: 98  ----LAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLG--P 151

Query: 177 EAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
           + FSY  L+  +S+ G++  A  +   M++  + PN++  ++ I+ L    ++ KA R L
Sbjct: 152 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVL 211

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
            +M  AG+ PN +TYNCLI GY      K+++++  EM      PD  +  + M  LCK 
Sbjct: 212 RQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKH 271

Query: 295 KRIKEVRDLMEKMV---------NDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTY 342
            RIKE RD+ + MV         +   L H     G I     L N M   G +PD   +
Sbjct: 272 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 331

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             ++N + R+G +D++  M + M   G  P+ ++++  ++  C  G+  +A E  N   +
Sbjct: 332 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 391

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE-INLLIQSLCREGKMD 461
               P+   YS ++ G      L +A +++ +M+ KG  P  ++    +I +LC+EG++ 
Sbjct: 392 TGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVA 451

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
             K  +   ++ G   N++ F SL+ G+C  G+++EA+ LLD M     +PD  TY T++
Sbjct: 452 EGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 511

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           D   K+GR+++A  L   ML K +  T V+Y  ++H   Q  R     ++  +M+     
Sbjct: 512 DGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMA 571

Query: 582 RT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
            +   Y  V+  LC     +EA  +L K+     K D  T ++++ +    G    A ++
Sbjct: 572 VSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKEL 631

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVFL 699
              +    L+P +   + +   LI E   E+AD L    +E+    P S    +  R+ L
Sbjct: 632 FAAISTYGLVPTILTYRVMITNLIKEESFEDADNL-FSSMEKSSCTPDSRILNEIIRMLL 690

Query: 700 N 700
           N
Sbjct: 691 N 691



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/555 (24%), Positives = 261/555 (47%), Gaps = 59/555 (10%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY-- 181
           A   FY  + Q     + + Y  ++  L KTK    A+RVLR M   G+  RP   +Y  
Sbjct: 172 AHDLFYKMEEQG-IMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGV--RPNNMTYNC 228

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+  YS +G  + ++ V   M  + + P++  CN+ +  L    ++ +A    + M L G
Sbjct: 229 LIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKG 288

Query: 242 ITPNVLTY-----------------------------------NCLIKGYCDLHRIKDAI 266
             P+V++Y                                   N LI  Y  L  +  ++
Sbjct: 289 PKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSL 348

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD--------QG 318
            + ++M  +G +PD +++ TV+   C+  R+ +  +    M+ D+ +  D        QG
Sbjct: 349 LMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI-DTGVPPDTAVYSCLIQG 407

Query: 319 R-----IEEAKELVNQMSQMGCIPDVVTY-TAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
           +     + +AKEL++ M   G  P  + + T+++N  C+ G + + K ++  + H G +P
Sbjct: 408 QCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRP 467

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N +++ + ++G C  G   EA  ++++ E     P+  TY+ ++ G  + G++ +A  + 
Sbjct: 468 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 527

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           R+M+ K    T V  N+++  L +  +   AK+   E +  G AV++  + +++ G C+ 
Sbjct: 528 RDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRN 587

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
              +EA  LL+ ++      D +T+  +I A+ K GR +EA EL   + + GLVPT++TY
Sbjct: 588 NCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTY 647

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVL 609
           R +I    +    ED   L   M  K  C       N++I  L + G + +AG  L K+ 
Sbjct: 648 RVMITNLIKEESFEDADNLFSSM-EKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKID 706

Query: 610 RTASKADASTCHVLV 624
           +     +A+T  +L+
Sbjct: 707 KKGILPEATTTSLLI 721



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 209/450 (46%), Gaps = 13/450 (2%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D I Y  +L   +      G   +  +M   G+      F+ L+ AY+R G +  ++ 
Sbjct: 290 KPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLL 349

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M K  V P+++  +T I       +L  A+     M   G+ P+   Y+CLI+G C
Sbjct: 350 MFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQC 409

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYT-VMGYLCKEKRIKEVRDLMEKMVNDS----- 311
           +   +  A +LI +M  KG  P  + ++T ++  LCKE R+ E +D+++ +++       
Sbjct: 410 NRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNL 469

Query: 312 ---NLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
              N   D     G ++EA  L++ M  +G  PD+ TY  +V+G+C+ G +D A  + + 
Sbjct: 470 ITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRD 529

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M H      +VSY   L+GL    +++ A+EM +   E     +  TY+ V+ GL R   
Sbjct: 530 MLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNC 589

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             EA  ++ ++         +  N++I+++ + G+   AK+        G    ++ +  
Sbjct: 590 TDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRV 649

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +I    ++   E+A +L   M      PD+     II  L   G V +A   + K+  KG
Sbjct: 650 MITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKG 709

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           ++P   T   +I+ +   G+  + +KLL +
Sbjct: 710 ILPEATTTSLLIYLFSVNGKYREYIKLLPE 739



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 164/388 (42%), Gaps = 48/388 (12%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M ++G+      FS ++ A+ R G+L +AM   + M    V P+  + +  I        
Sbjct: 354 MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRD 413

Query: 227 LAKALRFLERMQLAGITP------------------------------------NVLTYN 250
           L KA   +  M   GI P                                    N++T+N
Sbjct: 414 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFN 473

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEK 306
            L+ GYC +  +K+A+ L+D M   G  PD  +Y T++   CK  RI +     RD++ K
Sbjct: 474 SLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHK 533

Query: 307 MVNDSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
            V  +++ ++          R   AKE+ ++M + G    + TY  V+ G CR    D+A
Sbjct: 534 RVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEA 593

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L++++    K + +++   +  +   G+  EA+E+          P  +TY V++  
Sbjct: 594 NMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITN 653

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L +E    +A ++   M K    P    +N +I+ L  +G++  A  ++ +   KG    
Sbjct: 654 LIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPE 713

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMY 506
               + LI  F   G   E + LL + Y
Sbjct: 714 ATTTSLLIYLFSVNGKYREYIKLLPEKY 741


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 253/490 (51%), Gaps = 25/490 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           IV+ +++ +  + +    A +   +M  +GI  + E  + ++  + +  ++  A  + + 
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  ++  +   N  ++VL    KL KA  F+  M+  G  PNV++YN +I GY     
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           I+ A +++D M +KG  PD  +Y +++  +CKE                       GR+E
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKE-----------------------GRLE 314

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA  L ++M ++G +P+ VTY  +++G+C  G+L++A     +M   G  P+  +Y   +
Sbjct: 315 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 374

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           + L   G+  EA +MI    ++   P+AITY+++++G  R G   +A D+  EM+ KG  
Sbjct: 375 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIE 434

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           PT V    LI  L R  +M  A    ++ L++G + +V+ F +++ G C  G++E A  L
Sbjct: 435 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFML 494

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L +M      PD VT+ T++    + G+VEEA  L+ +M  +G+ P  ++Y T+I  Y +
Sbjct: 495 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGR 554

Query: 562 VGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G ++D  ++ ++MLS     T   YN +I+ LC     + A ++L +++      D ST
Sbjct: 555 RGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDST 614

Query: 620 CHVLVESYLN 629
              L+E   N
Sbjct: 615 YLSLIEGMGN 624



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 184/366 (50%), Gaps = 16/366 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           ++ + + Y  ++   S     +GA+R+L  M  +GIE  P++++Y  L+    + G+L  
Sbjct: 258 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE--PDSYTYGSLISGMCKEGRLEE 315

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +   M +  + PN +  NT I        L +A  + + M   GI P+V TYN L+ 
Sbjct: 316 ASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 375

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
                 R+ +A  +I EM  KG  PD ++Y  ++    +    K+  DL  +M++     
Sbjct: 376 ALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEP 435

Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                     +   + R++EA +L  ++   G  PDV+ + A+V+G C  G +++A  +L
Sbjct: 436 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLL 495

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           ++M      P+ V++   + G C  GK  EAR +++  +     P+ I+Y+ ++ G  R 
Sbjct: 496 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRR 555

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G + +A  V  EM+  GF PT +  N LI+ LC+  + D A++ ++E +NKG + +   +
Sbjct: 556 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 615

Query: 483 TSLIRG 488
            SLI G
Sbjct: 616 LSLIEG 621



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 174/370 (47%), Gaps = 3/370 (0%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           R +EA +    M + G +P + T   +++ F ++  ++ A  +  +M+         ++ 
Sbjct: 172 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 231

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             +N LC  GK  +ARE I   E   + PN ++Y+ ++HG    G +  A  ++  M  K
Sbjct: 232 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 291

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P       LI  +C+EG+++ A     + +  G   N V + +LI G+C KGDLE A
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 351

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
            S  D+M      P   TY  ++ AL   GR+ EA +++ +M  KG++P  +TY  +I+ 
Sbjct: 352 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 411

Query: 559 YCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           Y + G  +    L  +MLSK  +     Y  +I  L     ++EA  +  K+L      D
Sbjct: 412 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 471

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
               + +V+ +   G    A+ +   M  +++ PD      + +    EGK EEA  L+ 
Sbjct: 472 VIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLD 531

Query: 677 RFVERGHIQP 686
               RG I+P
Sbjct: 532 EMKRRG-IKP 540



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 135/270 (50%), Gaps = 27/270 (10%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +++ M ++GI   P+A +Y  L+  YSR G  + A  + + M    + P  +   + 
Sbjct: 386 ADDMIKEMRKKGI--IPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSL 443

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I+VL   N++ +A    E++   G++P+V+ +N ++ G+C    ++ A  L+ EM  K  
Sbjct: 444 IYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSV 503

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
            PD+V++ T+M   C+E                       G++EEA+ L+++M + G  P
Sbjct: 504 PPDEVTFNTLMQGRCRE-----------------------GKVEEARMLLDEMKRRGIKP 540

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D ++Y  +++G+ R G++  A ++  +M   G  P  ++Y A +  LC N +   A E++
Sbjct: 541 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 600

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
                +  +P+  TY  ++ G+     L E
Sbjct: 601 KEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 2/244 (0%)

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
           + +  +LL++  C   + D A K       KG    +     ++  F +   +E A  L 
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
            +M+  +      T+  +++ L K G++++A E +  M   G  P VV+Y T+IH Y   
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275

Query: 563 GRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           G +E   ++L+ M  K  +     Y  +I  +C  G LEEA  +  K++      +A T 
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
           + L++ Y NKG    A+     M  + ++P +     +   L +EG+  EAD ++    +
Sbjct: 336 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 395

Query: 681 RGHI 684
           +G I
Sbjct: 396 KGII 399


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 169/633 (26%), Positives = 274/633 (43%), Gaps = 67/633 (10%)

Query: 122  RVALQFFYWADRQ--WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECR---- 175
            R+AL+F  W  +Q     +H   +Y +   IL K ++   AK +LR + + GI  +    
Sbjct: 842  RLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFG 901

Query: 176  ------------PEAFSYLMVAYSRAGKLRNA--------------------MYVLSM-- 201
                        P  F  L+  Y + G +  A                    M + SM  
Sbjct: 902  ALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVK 961

Query: 202  -------------MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
                         M    + PN+   N  I+ L V   L KA   L++M+  G  P ++T
Sbjct: 962  DKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 1021

Query: 249  YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
            YN L+  YC   R K AI+LID M  KG   D  +Y   +  LC   R  +   L++KM 
Sbjct: 1022 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 1081

Query: 309  NDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
             +             N F  +G+I  A ++ N+MS+    P+ VTY A++ G C VG+ +
Sbjct: 1082 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 1141

Query: 357  QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
            +A ++L  M   G + N V+Y   LNGLC + K   A+ ++            I Y+V++
Sbjct: 1142 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 1201

Query: 417  HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
             GL + G L EA  +V  M K G  P  +  + LI   CR G +  AK+ +      G  
Sbjct: 1202 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 1261

Query: 477  VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            +N + +++LI  FCQ G++ EA+ +   M       D  T   ++ +L ++G++ EA + 
Sbjct: 1262 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 1321

Query: 537  MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCS 594
            +  M   GLVP  +TY  +I+ Y  +G   +     + M+   +      Y  +++ LC 
Sbjct: 1322 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 1381

Query: 595  FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
             G L EA K L ++       D+   + L+      G    A  +  +M   N++PD   
Sbjct: 1382 GGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 1441

Query: 655  CKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
               +   L  +GK+  A  L    + RG + P 
Sbjct: 1442 YSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPN 1474



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/523 (24%), Positives = 229/523 (43%), Gaps = 54/523 (10%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            D I Y  ++    +    + AK ++  M R G+      +S L+  + + G +  AM V 
Sbjct: 1228 DVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVY 1287

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            ++M       +   CN  +  L    KL +A +FL  M   G+ PN +TY+C+I GY  +
Sbjct: 1288 AVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSI 1347

Query: 260  HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLF 314
                +A    D+M   G  P   +Y +++  LCK   + E +  + ++       DS ++
Sbjct: 1348 GDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMY 1407

Query: 315  HD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR---------------- 351
            +         G + EA  L ++M Q   +PD  TY++++ G CR                
Sbjct: 1408 NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 1467

Query: 352  --------------------VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
                                 G    A    ++M   G  P+TV++ A ++     G+ +
Sbjct: 1468 RGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMM 1527

Query: 392  EAREMINTSEEEWWT--PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
            +A +  +T    WW   PN  TY++++HG  ++  L     +   M+++G FP  +  + 
Sbjct: 1528 KANDFFSTMR--WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHS 1585

Query: 450  LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
            LI  L + G  D   K + + + +G   +   F  LI  + + G + +A  L++ M    
Sbjct: 1586 LILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLG 1645

Query: 510  KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
              PD  TY  I + L+K     E+T ++ +ML  G++P    Y T+I+  C+VG ++   
Sbjct: 1646 VFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAF 1705

Query: 570  KLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
            KL ++M  L       A + ++  L   G  E+A  +L  +LR
Sbjct: 1706 KLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLR 1748



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 250/553 (45%), Gaps = 26/553 (4%)

Query: 160  AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
            A R+L  M   G+      +  L+    +  K   A  +L  M+      ++++ + A  
Sbjct: 1143 ALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR----VNDMVVGHIAYT 1198

Query: 220  VLVVG----NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
            VL+ G      L +A++ +  M   G+ P+V+TY+ LI G+C +  IK A ++I  M   
Sbjct: 1199 VLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRS 1258

Query: 276  GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-------------VNDSNLFHDQGRIEE 322
            G   +K+ Y T++   C+   + E   +   M             V  S+L  D G++ E
Sbjct: 1259 GLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD-GKLGE 1317

Query: 323  AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
            A++ +  MS++G +P+ +TY  ++NG+  +G+   A      M   G  P+  +Y + L 
Sbjct: 1318 AEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLK 1377

Query: 383  GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
            GLC  G  +EA++ +N         +++ Y+ ++    + G L EA  +  +MV+    P
Sbjct: 1378 GLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP 1437

Query: 443  TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV-NVVNFTSLIRGFCQKGDLEEALSL 501
                 + L+  LCR+GK   A       + +G    N V +T L+ G  + G  + A   
Sbjct: 1438 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYF 1497

Query: 502  LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
             ++M      PDTV +  IID+ S+ G++ +A +    M   G+ P + TY  ++H + +
Sbjct: 1498 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 1557

Query: 562  VGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
               +   L L   M+ +     +  ++ +I  L   G  +   K+LGK++   + AD  T
Sbjct: 1558 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFT 1617

Query: 620  CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
             ++L+  Y   G    A+ +   M    + PD      +   L  +    E+  ++   +
Sbjct: 1618 FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 1677

Query: 680  ERGHIQPKSEEHL 692
            E G I PK  +++
Sbjct: 1678 ENGVI-PKHAQYI 1689



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 184/414 (44%), Gaps = 24/414 (5%)

Query: 154  TKLCQGAKRVLRL------MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV 207
            T LC+  K V  +      M R  +      ++ L+   S+AG  + A Y    M K   
Sbjct: 1447 TGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGT 1506

Query: 208  APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
             P+ +  N  I       ++ KA  F   M+  G+ PN+ TYN L+ G+     +   + 
Sbjct: 1507 CPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLS 1566

Query: 268  LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FH 315
            L   M  +G  PDK+++++++  L K         L+ KM+ +  L            + 
Sbjct: 1567 LYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYS 1626

Query: 316  DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
            + G++ +A +LVN M+ +G  PD  TY  + NG  +     ++  +L +M  +G  P   
Sbjct: 1627 ESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHA 1686

Query: 376  SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
             Y   +NG+C  G    A ++ +  E   +  + +  S ++ GL   GK  +A  V+  M
Sbjct: 1687 QYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHM 1746

Query: 436  VKKGFFPTPVEINLLIQSLCREGKMDGA---KKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            ++    PT      L+   CR+ K+  A   K  M+ C   G  ++VV +  LI G C  
Sbjct: 1747 LRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC---GLKLDVVAYNVLIMGMCAN 1803

Query: 493  GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            GD   A  L ++M      P+  TY  ++DA+S    + +  +L+  +  +GL+
Sbjct: 1804 GDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1857



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 193/442 (43%), Gaps = 15/442 (3%)

Query: 179  FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL-RFLERM 237
            ++ L+    ++G L  A+ +   M +  V P+    ++ +  L    K   A+  F   M
Sbjct: 1407 YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 1466

Query: 238  QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
                + PN + Y CL+ G       K A    +EM  KG  PD V++  ++    +  ++
Sbjct: 1467 GRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQM 1526

Query: 298  KEVRDLMEKM--------VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
             +  D    M        +   N+    F  +  +     L + M + G  PD +T+ ++
Sbjct: 1527 MKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSL 1586

Query: 346  VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
            + G  + G  D   K+L +M   G   +  ++   +N    +GK  +A +++N       
Sbjct: 1587 ILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGV 1646

Query: 406  TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
             P+  TY+ + +GL ++    E+  V+ EM++ G  P   +   LI  +CR G + GA K
Sbjct: 1647 FPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFK 1706

Query: 466  FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
               E    G   + V  ++++RG    G  E+A+ +LD M   +  P   T+TT++    
Sbjct: 1707 LKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFC 1766

Query: 526  KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--T 583
            ++ ++ EA +L   M   GL   VV Y  +I   C  G      +L E+M  +  C   T
Sbjct: 1767 RDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNIT 1826

Query: 584  AYNQVIENLCSFGYLEEAGKIL 605
             Y  +++ + +   L +  K+L
Sbjct: 1827 TYAVLVDAISAANNLIQGEKLL 1848



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 141/326 (43%), Gaps = 14/326 (4%)

Query: 128  FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS 187
            F+   R W    +   Y ++L   SK +       +   M R GI      F  L++  S
Sbjct: 1532 FFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLS 1591

Query: 188  RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
            ++G     + +L  M       +    N  I+      K+ KA   +  M   G+ P+  
Sbjct: 1592 KSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRD 1651

Query: 248  TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK---EVRDLM 304
            TYN +  G       +++  ++ EM   G  P    Y T++  +C+   I+   +++D M
Sbjct: 1652 TYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 1711

Query: 305  EKMVNDSN----------LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
            E +   S+          L H  G+ E+A  +++ M +M  +P + T+T +++ FCR  +
Sbjct: 1712 EALGFGSHEVAESAMVRGLLH-CGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK 1770

Query: 355  LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
            + +A K+   M   G K + V+Y   + G+C NG S  A E+          PN  TY+V
Sbjct: 1771 IAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAV 1830

Query: 415  VMHGLRREGKLSEACDVVREMVKKGF 440
            ++  +     L +   ++ ++ ++G 
Sbjct: 1831 LVDAISAANNLIQGEKLLTDLQERGL 1856


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 251/476 (52%), Gaps = 15/476 (3%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           +AGK   ++Y L  +      P++++C   I        + KA R +E ++ +   P+V 
Sbjct: 80  KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILE-SHTEPDVF 138

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            YN +I G+C ++RI+ A ++++ M  +G  PD V+Y  ++G LC  +++     +++++
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198

Query: 308 VNDSNLFH------------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           + D+ +               +G I EA +L+ +M   G +PD+ TY A++ G C+ G +
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           ++A +++  +   GCKP+ +SY   L    + GK  E  +++         PN +TYS++
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +  L R G++ EA  V++ M++K   P     + LI +LC+EG++D A   M   ++ GC
Sbjct: 319 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 378

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             ++VN+ +++   C+ G+  +AL + + +      P+  +Y T+I AL   G    A  
Sbjct: 379 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 438

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
           ++  M+SKG+ P  +TY ++I   C+ G VE+ + LL+ M     +    +YN V+  LC
Sbjct: 439 MVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 498

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
               +++A  +  +++    + + +T  +L+E     G    A ++A  +F+R++I
Sbjct: 499 KVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 554



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 234/470 (49%), Gaps = 32/470 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y  D I+   +++     K  + A RV+ ++        P+ F+Y  ++  + +  ++  
Sbjct: 99  YTPDVILCTKLIKGFFNFKNIEKASRVMEILES---HTEPDVFAYNAVISGFCKVNRIEA 155

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  VL+ M+     P+++  N  I  L    KL  AL+ L+++ L    P V+TY  LI+
Sbjct: 156 ATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIE 215

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
                  I +A+KL++EM  +G  PD  +Y  ++  +CKE                    
Sbjct: 216 ATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE-------------------- 255

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G +E A EL+  ++  GC PDV++Y  ++  F   G+ D+ +K++ +M+  GC+PN 
Sbjct: 256 ---GMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y+  ++ LC  G+  EA  ++    E+  TP+  +Y  ++  L +EG+L  A  ++  
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M+  G  P  V  N ++ +LC+ G  + A +   +    GC  NV ++ ++I      GD
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 432

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
              AL ++  M     DPD +TY ++I  L ++G VEEA  L+  M   G  PTV++Y  
Sbjct: 433 RSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 492

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEA 601
           V+   C+V R++D + +  +M+ K  CR   T Y  +IE +   G+  EA
Sbjct: 493 VLLGLCKVRRIDDAIGMFAEMIEK-GCRPNETTYILLIEGIGFAGWRTEA 541



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 178/342 (52%), Gaps = 4/342 (1%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PDV  Y AV++GFC+V  ++ A ++L +M   G  P+ V+Y   +  LC+  K   A ++
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           ++    +   P  ITY++++     EG ++EA  ++ EM+ +G  P     N +I+ +C+
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           EG ++ A + +    +KGC  +V+++  L+R F  +G  +E   L+ +M+    +P+ VT
Sbjct: 255 EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 314

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y+ +I +L + GR++EA  ++  M+ K L P   +Y  +I   C+ GR++  + +++ M+
Sbjct: 315 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374

Query: 577 SKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           S   C      YN ++  LC  G   +A +I  K+       + S+ + ++ +  + G  
Sbjct: 375 S-NGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 433

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
             A  +   M ++ + PD      +   L  +G  EEA  L+
Sbjct: 434 SRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLL 475



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 158/329 (48%), Gaps = 3/329 (0%)

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++N  C+ G+ +++   L+ + + G  P+ +  T  + G   N K++E    +    E  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGF-FNFKNIEKASRVMEILESH 132

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P+   Y+ V+ G  +  ++  A  V+  M  +GF P  V  N++I SLC   K+  A 
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           K + + L   C   V+ +T LI     +G + EA+ LL++M      PD  TY  II  +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCR 582
            K G VE A EL+  + SKG  P V++Y  ++  +   G+ ++  KL+ +M S+  +  +
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             Y+ +I +LC FG ++EA  +L  ++      D  +   L+ +   +G   LA  +   
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           M +   +PD+     +   L   G + +A
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQA 401



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 3/263 (1%)

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           + GK +E+   +  +V KG+ P  +    LI+       ++ A + M E L      +V 
Sbjct: 80  KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVF 138

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + ++I GFC+   +E A  +L+ M      PD VTY  +I +L    ++  A +++ ++
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYL 598
           L    +PTV+TY  +I      G + + +KLLE+ML++        YN +I  +C  G +
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           E A +++  +     K D  + ++L+ ++LN+G      K+   MF+R   P+      +
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318

Query: 659 SERLILEGKSEEADTLMLRFVER 681
              L   G+ +EA +++   +E+
Sbjct: 319 ISSLCRFGRIDEAISVLKVMIEK 341



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 4/213 (1%)

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ G   E+L  L+ +      PD +  T +I        +E+A+ +M ++L     P V
Sbjct: 79  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDV 137

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGK 607
             Y  VI  +C+V R+E   ++L +M ++        YN +I +LC+   L  A K+L +
Sbjct: 138 FAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQ 197

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +L         T  +L+E+ + +G    A K+   M  R L+PD+     +   +  EG 
Sbjct: 198 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 257

Query: 668 SEEADTLMLRFVERGHIQPKSEEHLQRQRVFLN 700
            E A  L+     +G  +P    +    R FLN
Sbjct: 258 VERAAELITSLTSKG-CKPDVISYNILLRAFLN 289


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 226/482 (46%), Gaps = 36/482 (7%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLM------ARRGIEC--- 174
           AL+ F+   R+     +P +Y  ++ +L+  KL   A+ ++R +      +RR   C   
Sbjct: 53  ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSV 112

Query: 175 ------------RPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
                        P  F  L++A+S  G +  A++V   M    V P +  CN  +  LV
Sbjct: 113 FNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLV 169

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              +     +    M   G +PNV+TY  LI G C       A +L DEM  K   P  V
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQM 330
            Y  ++  LC E RI E   +   M N   L            +     +++A EL  +M
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              G +P+VVT+  +++G C+  E+  A+K L  M   G  PN   Y   ++G C  G  
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA  + +  E+    P+  TYS+++ GL    ++ EA  +++EM KKGF P  V  N L
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I   C+EG M+ A +   +   KG   N++ F++LI G+C+ G +E A+ L  +M +   
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            PD V YT +ID   K+G  +EA  L  +M   GL P V T   +I   C+ GR+ D +K
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529

Query: 571 LL 572
           L 
Sbjct: 530 LF 531



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 223/502 (44%), Gaps = 53/502 (10%)

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKA-----------------------LRFLER 236
           S+ ++A +A N  + +  IHVL      AKA                          L R
Sbjct: 59  SVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSR 118

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           ++ +  TPNV  +  LI  + ++  +++A+ +                Y  M  L   + 
Sbjct: 119 LESSKFTPNV--FGVLIIAFSEMGLVEEALWV----------------YYKMDVLPAMQA 160

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
              V D + K          +GR +   ++   M   G  P+VVTY  +++G CR G+  
Sbjct: 161 CNMVLDGLVK----------KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A ++  +M      P  V YT  + GLC   +  EA  M  T       PN  TY+ +M
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            G  +   + +A ++ +EM+  G  P  V   +LI  LC+  +M  A+KF+ +  + G  
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            N+  +  LI G+C+ G+L EALSL  ++   +  PD  TY+ +I  L    R+EEA  L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCS 594
           + +M  KG +P  VTY T+I  YC+ G +E  +++  +M  K  +     ++ +I+  C 
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            G +E A  +  +++      D      L++ +   G    A+++   M    L P++  
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510

Query: 655 CKKVSERLILEGKSEEADTLML 676
              + + L  +G+  +A  L L
Sbjct: 511 LSCLIDGLCKDGRISDAIKLFL 532



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 130/286 (45%), Gaps = 7/286 (2%)

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           E   +TPN   + V++      G + EA  V  +M      P     N+++  L ++G+ 
Sbjct: 120 ESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRF 174

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D   K   + + +G + NVV + +LI G C++GD  +A  L D+M   K  P  V YT +
Sbjct: 175 DTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTIL 234

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           I  L    R+ EA  +   M + G++P + TY T++  YC++  V+  L+L ++ML    
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGL 294

Query: 581 CR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
                 +  +I+ LC    +  A K L  +       +    + L++ Y   G    A  
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALS 354

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           +   +    ++PD+     + + L    + EEAD L+    ++G +
Sbjct: 355 LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400



 Score = 46.2 bits (108), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 59/283 (20%), Positives = 103/283 (36%), Gaps = 38/283 (13%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G  P +     LI  Y     + DA  + DE+P    S + +S+ +V+            
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHNMFDEIP----SKNLISWTSVI------------ 704

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                      + + D  R  +A +L  QM      PD+VT T  ++    +G LD  + 
Sbjct: 705 -----------SAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEW 753

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +   + H G   +     + +N     G+   AR            PN +T+  V+    
Sbjct: 754 IHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRF------SLVLPNDVTFMGVLMACS 807

Query: 421 REGKLSEACDVVREMVKK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
             G + E     R M +     P       ++  LCR G +  A +F+   L      N 
Sbjct: 808 HAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFI---LKMPVRPNA 864

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           V + +L+ G C    + +   L+ +    ++DP   +    ID
Sbjct: 865 VVWRTLL-GACSLQGMWDKKMLVRNQIKQRRDPGCSSIEVGID 906



 Score = 40.0 bits (92), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 98/242 (40%), Gaps = 20/242 (8%)

Query: 153 KTKLCQGAKRVLRLMARRGIECRPEAF--SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           K+ L +G K++  L+   G E  P  F  + L+  YS  G + +A  +   +     + N
Sbjct: 644 KSSLVEG-KQMHALVINFGFE--PIIFLQTSLISMYSATGNVADAHNMFDEIP----SKN 696

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           L+   + I   V   +  KAL+   +MQ+  + P+++T    +    DL  +     +  
Sbjct: 697 LISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHA 756

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF------HDQGRIEEAK 324
            +  +G   D     +++    K   I   R     + ND             G +EE K
Sbjct: 757 YIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGK 816

Query: 325 ELVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
           +    M +   + P +  +  +V+  CR G L +A + + +M     +PN V +   L G
Sbjct: 817 QHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLL-G 872

Query: 384 LC 385
            C
Sbjct: 873 AC 874


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 255/520 (49%), Gaps = 31/520 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R G+      ++ L+ A    G+L  A+ V+  M+ A  APN +  NT +       +
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 227 LAKALRFLERMQLAG-ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           L  A R +  M+  G   PN++T+N ++ G C   R++ A K+ DEM  +G +PD VSY 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 286 TVMGYLCKEKRIKEV---------RDLMEKMVNDSNLFH---DQGRIEEAKELVNQMSQM 333
           T++   CK   + E          R L+  +V  ++L H     G +E+A  LV QM + 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G   + VT+TA+++GFC+ G LD A   +++M   G +P+ V Y A +NG C  G+   A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
           RE+I   E +   P+ +TYS ++ G  + G L  A  + ++M+KKG  P  +  + LI+ 
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           LC E +++ A +  +  L  G   +   +T+LI G C++G++E+ALSL D+M      PD
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VTY+ +I+ LSK+ R +EA  L+ K+  +  VP  + Y  ++   C     + ++ LL 
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM-LCCSKAEFKSVVALL- 418

Query: 574 KMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
                           +  C  G ++EA K+   +L    K D S   +L+  +   G  
Sbjct: 419 ----------------KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNV 462

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             A     +M      P+      +   L  EG   EAD 
Sbjct: 463 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADN 502



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 110/453 (24%), Positives = 210/453 (46%), Gaps = 42/453 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + +  M+  L K    +GA++V   M R G+   P+  SY  L+  Y + G L  ++ V 
Sbjct: 82  VTFNSMVNGLCKAGRMEGARKVFDEMVREGLA--PDVVSYNTLLSGYCKVGCLHESLAVF 139

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S M +  + P+++   + IH       L +A+  + +M+  G+  N +T+  LI G+C  
Sbjct: 140 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 199

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             + DA+  ++EM   G  P  V Y  ++   CK                        GR
Sbjct: 200 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK-----------------------LGR 236

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++ A+EL+ +M      PDVVTY+ +++G+C+VG LD A ++ Q+M   G  P+ ++Y++
Sbjct: 237 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 296

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            + GLC   +  +A E+     +    P+  TY+ ++ G  +EG + +A  +  EM++KG
Sbjct: 297 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 356

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF---------------TS 484
             P  V  ++LI  L +  +   A + + +  ++    + + +                +
Sbjct: 357 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVA 416

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L++GFC KG ++EA  +   M       D   Y+ +I    + G V +A     +ML  G
Sbjct: 417 LLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG 476

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
             P   +  +++    + G V +    ++ +L+
Sbjct: 477 FSPNSTSTISLVRGLFEEGMVVEADNAIQDLLT 509



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 194/436 (44%), Gaps = 62/436 (14%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  ++    K    + A  ++  M  RG+      F+ L+  + + G L +A+  +
Sbjct: 150 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 209

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+K  + P+++  N  I+      ++  A   +  M+   + P+V+TY+ +I GYC +
Sbjct: 210 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 269

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
             +  A +L  +M  KG  PD ++Y +++  LC+EKR+ +  +L E M+      D   +
Sbjct: 270 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 329

Query: 315 HD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +G +E+A  L ++M + G +PDVVTY+ ++NG  +     +A ++L ++YH
Sbjct: 330 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 389

Query: 368 HGCKPNTVSY---------------TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
               P+ + Y                A L G C  G   EA ++  +  +  W  +   Y
Sbjct: 390 EDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVY 449

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           S+++HG  R G + +A    ++M++ GF P                              
Sbjct: 450 SILIHGHCRGGNVRKALSFHKQMLRSGFSP------------------------------ 479

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
                N  +  SL+RG  ++G + EA + + D+  C    D      +ID   K G V+ 
Sbjct: 480 -----NSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDA 534

Query: 533 ATELMMKMLSKGLVPT 548
             +++  M   GL+P+
Sbjct: 535 LIDVLCGMARDGLLPS 550



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 3/174 (1%)

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P+  TY  ++ AL   GR+EEA  ++  M   G  P  VTY T++  +C+ G ++   ++
Sbjct: 8   PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67

Query: 572 LEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           +  M  +   +     +N ++  LC  G +E A K+  +++R     D  + + L+  Y 
Sbjct: 68  VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             G    +  V   M  R L+PD+     +       G  E+A  L+ +  ERG
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 234/498 (46%), Gaps = 75/498 (15%)

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
            LRF + M+  G  PNV+TYN +I GYC L R  +A   +  M LKG  P+ +++  ++ 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            LC++                       GR++E  E++ +MS+ G +PD VTY  +VNG+
Sbjct: 62  GLCRD-----------------------GRLKETSEVLVEMSRKGYVPDEVTYNTLVNGY 98

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G   QA  +  +M  +G  PN V+YT+ +N +C  G    A E  +        PN 
Sbjct: 99  CKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNE 158

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            TY+ +++G  ++G L EA  V+ EM + GF P+ V  N LI   C  G+M+ A   +Q+
Sbjct: 159 RTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQD 218

Query: 470 CLNKGCAVNVVNFTSLIRGF-----------------------------------CQKGD 494
            + KG   +VV+++++I GF                                   C++  
Sbjct: 219 MVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRR 278

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           L EA  +  +M   K  PD  TYTT+I+A  K G + +A  L  +M+ KG +P  VTY  
Sbjct: 279 LTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNV 338

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSF---------------GY 597
           +I+   +  R ++  +LL K+       +A  YN +IEN C+                G 
Sbjct: 339 LINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGL 398

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
           ++EA ++   ++    K + +  +V++  +   G  L AYK+   M + + +P       
Sbjct: 399 MDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLA 458

Query: 658 VSERLILEGKSEEADTLM 675
           + + L  EG   E + ++
Sbjct: 459 LVKALFTEGMDGELNEVI 476



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 243/520 (46%), Gaps = 33/520 (6%)

Query: 162 RVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           R  + M R G  C P   +Y  ++  Y +  +   A   L  M    + PNL+  N  I+
Sbjct: 4   RFFKEMERNG--CLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    +L +    L  M   G  P+ +TYN L+ GYC       A+ L  EM   G SP
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM------------VNDSNLFHDQGRIEEAKELV 327
           + V+Y +++  +CK   +    +  ++M                N F  QG ++EA  ++
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           N+M++ G IP +VTY A++NG C +G +++A  +LQ M   G  P+ VSY+  ++G   N
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            +   A +M      +   P+A+TYS ++ GL  + +L+EACD+ +EM+     P     
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             LI + C+EG ++ A     E + KG   + V +  LI G  ++   +EA  LL  ++ 
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFY 361

Query: 508 CKKDPDTVTYTTIID-----------ALSKN----GRVEEATELMMKMLSKGLVPTVVTY 552
               P  VTY T+I+           AL K     G ++EA ++   M++K   P    Y
Sbjct: 362 DDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIY 421

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN--QVIENLCSFGYLEEAGKILGKVLR 610
             +IH +C++G V    KL ++M+             +++ L + G   E  +++G +LR
Sbjct: 422 NVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILR 481

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
           +    DA    VLVE    +G   + + +   M    LIP
Sbjct: 482 SCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIP 521



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 2/220 (0%)

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           +F +E    GC  NVV + ++I G+C+    +EA   L  M L   +P+ +T+  II+ L
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCR 582
            ++GR++E +E++++M  KG VP  VTY T+++ YC+ G     L L  +M+        
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             Y  +I ++C  G L  A +   ++       +  T   ++  +  +G+   AY+V   
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           M     IP +     +     + G+ EEA  L+   V +G
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKG 223


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 156/570 (27%), Positives = 273/570 (47%), Gaps = 20/570 (3%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRL-MARRGIECRPEAFSYLMV--AYSRAGKLR 193
           +R + IV   +L+ L   K    A  +L L M+  G  C P+  +Y  V   + R G++ 
Sbjct: 121 WRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFG--CPPDVVAYNTVINGFFREGQVE 178

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  +   M    + PN++   T I  L     + +A    ++M   G+ P+  TYNCLI
Sbjct: 179 KAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLI 238

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND--- 310
            GY    + K+ +++++EM   G  PD ++Y  ++ YLCK  R +E R   + M      
Sbjct: 239 HGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIK 298

Query: 311 ------SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                 + L H    +G + E    ++ M   G  P+   +  +   + +   +++A  +
Sbjct: 299 PDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHI 358

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             +M   G  P+ VS+ A ++ LC  G+  +A    N    E  TPN   +S +++GL  
Sbjct: 359 FNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCT 418

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            GK  +A ++  E++ +G     V  N L+ +LC EG++  A++ +   +  G   NV++
Sbjct: 419 VGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVIS 478

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           + +L+ G C  G ++EA  LLD M      P+  TYT ++    K  RV++A  L  +ML
Sbjct: 479 YNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREML 538

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML-SKQKCRT-AYNQVIENLCSFGYLE 599
            KG+ P V TY T++H   Q GR  +  +L   M+ S+ KC    YN ++  LC   +++
Sbjct: 539 MKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVD 598

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           EA K+  ++     + D+ T ++++ + L  G    A  +   +    L+PD+   + ++
Sbjct: 599 EAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIA 658

Query: 660 ERLILEGKSEEADTLMLRFVERGHIQPKSE 689
           E LI EG   E D L    +E+    P S 
Sbjct: 659 ENLIEEGSLGEFDGL-FSAMEKSGTAPNSH 687



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 202/443 (45%), Gaps = 24/443 (5%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + PN  TY+ LI  +C + R++        +   G   + +    ++  LC  KR+ E  
Sbjct: 86  VAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEAT 145

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
           D+                      L+ +MS+ GC PDVV Y  V+NGF R G++++A  +
Sbjct: 146 DI----------------------LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNL 183

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             +M   G  PN V+YT  ++GLC       A+ +     +    P+  TY+ ++HG   
Sbjct: 184 FLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLS 243

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            GK  E   ++ EM   G  P  +   LL+  LC+ G+   A+ F      KG   +V  
Sbjct: 244 TGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAI 303

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +  L+ G+  KG L E  S LD M      P+   +  +  A +K   +EEA  +  KM 
Sbjct: 304 YAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMR 363

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLE 599
            +GL P VV++  +I   C++GRV+D +    +M+++        ++ ++  LC+ G  E
Sbjct: 364 QQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWE 423

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           +A ++  +VL      DA   + L+ +  N+G  + A ++   M    + P++     + 
Sbjct: 424 KAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLV 483

Query: 660 ERLILEGKSEEADTLMLRFVERG 682
               L G+ +EA  L+   V  G
Sbjct: 484 AGHCLTGRIDEAAKLLDVMVSNG 506



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 205/467 (43%), Gaps = 47/467 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y ++L+ L K   C+ A+     M R+GI+     ++ L+  Y+  G L      L
Sbjct: 265 DCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFL 324

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M    V+PN  I N           + +A+    +M+  G++P+V+++  LI   C L
Sbjct: 325 DLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKL 384

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
            R+ DA+   ++M  +G +P+   + +++  LC   + ++  +L  ++++     D+  F
Sbjct: 385 GRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFF 444

Query: 315 H-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +       ++GR+ EA+ L++ M ++G  P+V++Y  +V G C  G +D+A K+L  M  
Sbjct: 445 NTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVS 504

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEA----REMI-----------NT-----------SE 401
           +G KPN  +YT  L G C   +  +A    REM+           NT           SE
Sbjct: 505 NGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSE 564

Query: 402 EEWWTPNAI---------TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
                 N I         TY+++++GL +   + EA  + R +  K      V  N++I 
Sbjct: 565 ANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIG 624

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           +L + G+ + A          G   +VV +  +     ++G L E   L   M      P
Sbjct: 625 ALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAP 684

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
           ++     ++  L   G +  A   + K+  K       T   +I  Y
Sbjct: 685 NSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLY 731



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 166/386 (43%), Gaps = 13/386 (3%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           RQ     D + +  +++ L K      A      M   G+      FS L+      GK 
Sbjct: 363 RQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKW 422

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A  +   +    +  + +  NT +  L    ++ +A R ++ M   G+ PNV++YN L
Sbjct: 423 EKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTL 482

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV---- 308
           + G+C   RI +A KL+D M   G  P++ +Y  ++   CK +R+ +   L  +M+    
Sbjct: 483 VAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGV 542

Query: 309 -----NDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                  + + H     GR  EA EL   M       D+ TY  ++NG C+   +D+A K
Sbjct: 543 TPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFK 602

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           M +++     + ++V++   +  L   G+  +A ++  T       P+ +TY ++   L 
Sbjct: 603 MFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLI 662

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
            EG L E   +   M K G  P    +N L++ L   G +  A  ++ +   K  ++   
Sbjct: 663 EEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEAS 722

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMY 506
             TS++     +G+ +     L + Y
Sbjct: 723 T-TSMLISLYSRGEYQPHAKSLPEKY 747


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 131/502 (26%), Positives = 251/502 (50%), Gaps = 14/502 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y+ ++  L        A  VL  M RRG    P  +  ++ A  R G  R+A+ VL  + 
Sbjct: 125 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 184

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
               A ++  CN  ++ +     + KAL  L  +   G  P+V++YN ++KG C   R  
Sbjct: 185 ARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 244

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFHD-- 316
              +L++EM    C P+ V++ T++ YLC+    + V +++ +M       D  ++    
Sbjct: 245 CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATII 304

Query: 317 -----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                +G ++ A E++N+M   G  P+VV Y  ++ G C     ++ +++L +M+   C 
Sbjct: 305 DGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCP 364

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            + V++   ++  C NG      E++         P+ ITY+ V++G  +EG + EA  +
Sbjct: 365 LDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVML 424

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           ++ M   G  P  +   ++++ LC   +   A+  M + + +GC +N + F +LI   C+
Sbjct: 425 LKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCK 484

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           KG +E+A+ LL  M +    PD ++Y+T+ID L K G+ +EA EL+  M++KG+ P  + 
Sbjct: 485 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTII 544

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y ++     + GR+  ++++ + +   + +     YN VI +LC  G  E A + L  ++
Sbjct: 545 YSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMV 604

Query: 610 RTASKADASTCHVLVESYLNKG 631
            +    + ST  +L+    ++G
Sbjct: 605 SSGCVPNESTYTILIRGLASEG 626



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 226/465 (48%), Gaps = 17/465 (3%)

Query: 219 HVLVVGNKLAKALRFLERMQLA-GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           + +V G   A  L    R+  A  + PN  TY  +++  C   RI DA+ ++DEMP +GC
Sbjct: 94  NAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGC 153

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDSNL----FHDQGRIEEAKE 325
           +P    Y+ ++   C+    +    ++E +        V + NL      DQG +++A  
Sbjct: 154 APIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALH 213

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+  +   GC PDVV+Y AV+ G C        ++++++M    C PN V++   ++ LC
Sbjct: 214 LLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLC 273

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            NG      E++    E   TP+   Y+ ++ G+ +EG L  A +++  M   G  P  V
Sbjct: 274 RNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVV 333

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N L++ LC   + +  ++ + E  +K C ++ V F  L+  FCQ G ++  + LL+ M
Sbjct: 334 CYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 393

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
            +    PD +TYTT+I+   K G ++EA  L+  M + G  P  ++Y  V+   C   R 
Sbjct: 394 LVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERW 453

Query: 566 EDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
            D   L+ +M+ +Q C      +N +I  LC  G +E+A ++L ++L      D  +   
Sbjct: 454 VDAEDLMSQMI-QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 512

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +++     G    A ++   M N+ + P+  +   ++  L  EG+
Sbjct: 513 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGR 557



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 217/423 (51%), Gaps = 14/423 (3%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P+  SY  ++     A +      ++  M + A  PN++  NT I  L       +  
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVH 282

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
             L +M   G TP++  Y  +I G C    +K A ++++ MP  G  P+ V Y T++  L
Sbjct: 283 EVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGL 342

Query: 292 CKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           C  +R +E  +L+ +M +              + F   G ++   EL+ QM   GC+PDV
Sbjct: 343 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDV 402

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           +TYT V+NGFC+ G +D+A  +L+ M   GCKPNT+SYT  L GLC   + ++A ++++ 
Sbjct: 403 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 462

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             ++    N IT++ +++ L ++G + +A +++++M+  G  P  +  + +I  L + GK
Sbjct: 463 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
            D A + +   +NKG + N + ++S+     ++G + + + + D++       D V Y  
Sbjct: 523 TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNA 582

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +I +L K G  E A E +  M+S G VP   TY  +I      G V++  ++L ++ SK 
Sbjct: 583 VISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642

Query: 580 KCR 582
             R
Sbjct: 643 ALR 645



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 242/479 (50%), Gaps = 14/479 (2%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           P +Y+++LE   +    + A RVL  +  RG        + ++ A    G +  A+++L 
Sbjct: 157 PPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLR 216

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            +      P+++  N  +  L +  +       +E M      PN++T+N LI   C   
Sbjct: 217 DLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNG 276

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDS 311
             +   +++ +M   GC+PD   Y T++  +CKE  +K   +++ +M         V  +
Sbjct: 277 LFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYN 336

Query: 312 NLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
            L        R EE +EL+ +M    C  D VT+  +V+ FC+ G +D+  ++L+QM  H
Sbjct: 337 TLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVH 396

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           GC P+ ++YT  +NG C  G   EA  ++ +       PN I+Y++V+ GL    +  +A
Sbjct: 397 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDA 456

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            D++ +M+++G    P+  N LI  LC++G ++ A + +++ L  GC+ ++++++++I G
Sbjct: 457 EDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 516

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
             + G  +EAL LL+ M      P+T+ Y++I  ALS+ GR+ +  ++   +    +   
Sbjct: 517 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 576

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKIL 605
            V Y  VI   C+ G  E  ++ L  M+S       + Y  +I  L S G+++EA ++L
Sbjct: 577 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 635



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 157/336 (46%), Gaps = 5/336 (1%)

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y A+V G+CR G+L+ A+++   +      PN  +Y   +  LC  G+  +A  +++   
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                P    Y V++    R G    A  V+ ++  +G        NL++ ++C +G +D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A   +++  + GC  +VV++ ++++G C          L+++M      P+ VT+ T+I
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--Q 579
             L +NG  E   E++ +M   G  P +  Y T+I   C+ G ++   ++L +M S   +
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                YN +++ LCS    EE  ++L ++       D  T ++LV+ +   G+     ++
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
             +M     +PD+     V      EG  +EA  L+
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLL 425



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 4/176 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           +PI +  ++  L K  L + A  +L+ M   G  C P+  SY  V     +AGK   A+ 
Sbjct: 471 NPITFNTLINFLCKKGLVEQAIELLKQMLVNG--CSPDLISYSTVIDGLGKAGKTDEALE 528

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L++M    ++PN +I ++    L    ++ K ++  + +Q   I  + + YN +I   C
Sbjct: 529 LLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLC 588

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
                + AI+ +  M   GC P++ +Y  ++  L  E  +KE ++++ ++ +   L
Sbjct: 589 KRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 254/496 (51%), Gaps = 13/496 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMYVLSM 201
           Y ++L +L++      A  + R M  R     P  F++ + A +  R G+   A+ +L  
Sbjct: 142 YNVVLSVLARADCHADALALYRRMVHRD-RVPPTTFTFGVAARALCRLGRANEALALLRG 200

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +    P+ ++  T IH L     + +A   L  M L G   +V T++ +++G C L R
Sbjct: 201 MARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGR 260

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-DSNLFHD---- 316
           +++A +L+D M  KGC P  ++Y  ++  LC+ ++  E R ++ ++   +  LF+     
Sbjct: 261 VREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGG 320

Query: 317 ---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
              +G++ EA EL   M   GC PD  TY+ +++G C++G +  A ++L++M   G  PN
Sbjct: 321 CLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPN 380

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            V+YT  L+  C NG   + R ++     +  T N+  Y+ +++ L ++G++ EA  +++
Sbjct: 381 VVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQ 440

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM  +G  P     N +I  LC   +M+ A+   +  L +G   N + + ++I    + G
Sbjct: 441 EMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDG 500

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
             ++A+ L  +M L     D V+Y  +I A+ K+G V+ +  L+ +M  KG+ P  V+Y 
Sbjct: 501 RWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYN 560

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            +I   C+  RV D L+L ++ML++        YN +I  LC  G++  A  +L K+   
Sbjct: 561 ILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE 620

Query: 612 ASKADASTCHVLVESY 627
               D  T ++L+  +
Sbjct: 621 NVHPDIITYNILISWH 636



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 169/342 (49%), Gaps = 17/342 (4%)

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVA 208
           L++ KL + A  +   M  +G  C+P+A +Y  LM    + G++ +A+ +L  M+K   A
Sbjct: 322 LAEGKLAE-ATELYETMGLKG--CQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFA 378

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           PN++     +H              LE M   G+T N   YN +I   C   R+ +A+ L
Sbjct: 379 PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL 438

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHD--- 316
           I EM  +GC+PD  SY T++ +LC  ++++E   + E ++ +         + + H    
Sbjct: 439 IQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLR 498

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            GR ++A  L  +M   GC  DVV+Y  ++   C+ G +D++  +L++M   G KPN VS
Sbjct: 499 DGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVS 558

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   ++ LC   +  +A E+      +   P+ +TY+ +++GL + G +  A +++ ++ 
Sbjct: 559 YNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLH 618

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
            +   P  +  N+LI   C+   +D A   +   +   C V 
Sbjct: 619 NENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVG 660



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 205/441 (46%), Gaps = 23/441 (5%)

Query: 265 AIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ------ 317
           A+ L+D++P + G  P   SY  V+  L +     +   L  +MV+   +          
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 318 -------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                  GR  EA  L+  M++ GC+PD V Y  V++  C  G + +A  +L +M   GC
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
             +  ++   + G+C  G+  EA  +++    +   P  +TY  ++ GL R  +  EA  
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA-- 299

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
             R M+ +      V  N +I     EGK+  A +  +    KGC  +   ++ L+ G C
Sbjct: 300 --RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           + G +  A+ LL +M      P+ VTYT ++ +  KNG  ++   L+ +M +KGL     
Sbjct: 358 KLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGK 607
            Y  +I+  C+ GR+++ + L+++M S Q C     +YN +I +LC+   +EEA  +   
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRS-QGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +L     A+  T + ++ + L  G    A ++A  M       D+     + + +  +G 
Sbjct: 477 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 536

Query: 668 SEEADTLMLRFVERGHIQPKS 688
            + +  L+    E+G I+P +
Sbjct: 537 VDRSLVLLEEMAEKG-IKPNN 556



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 68/131 (51%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ + K      +  +L  MA +GI+    +++ L+    +  ++R+A+ + 
Sbjct: 520 DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELS 579

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    +AP+++  NT I+ L     +  AL  LE++    + P+++TYN LI  +C +
Sbjct: 580 KQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 639

Query: 260 HRIKDAIKLID 270
             + DA  L++
Sbjct: 640 RLLDDAAMLLN 650


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 253/478 (52%), Gaps = 15/478 (3%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           RAGK   ++Y L  M      P++++C   I        + KA R +E ++  G  P+V 
Sbjct: 81  RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVF 139

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            YN LI G+   +++++A +++D M  +G  PD V+Y  ++G  C   ++    ++ E++
Sbjct: 140 AYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEEL 199

Query: 308 VNDS--------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           + D+         +  +     G I+ A +L+++M   G  PD +TY A++ G C+   +
Sbjct: 200 LKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMV 259

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D+A ++L+ +   GCKP+ ++Y   L  L   GK  E  ++I+        PN +T+S++
Sbjct: 260 DKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSIL 319

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +  L R+GK+ EA +++R M +KG  P     + LI   CREG++D A +F++  ++ GC
Sbjct: 320 IGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGC 379

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             ++VN+ +++ G C+ G  ++AL + + +      P+  +Y T+  AL  +G    A E
Sbjct: 380 LPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALE 439

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
           +++K+L++G+ P  +TY ++I   C+ G V++ ++LL  M S   +    +YN ++  LC
Sbjct: 440 MILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLC 499

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
                 +A ++L  +     + + +T  +L+E     G+   A ++A  +   N I +
Sbjct: 500 KVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISE 557



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 196/414 (47%), Gaps = 13/414 (3%)

Query: 136 RY-RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
           RY + D   Y  ++    K    + A RVL  M  RG       ++ ++ ++   GKL  
Sbjct: 132 RYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDL 191

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +   + K    P ++     I   ++   +  A++ L+ M   G+ P+ LTYN +I+
Sbjct: 192 ALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIR 251

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN----D 310
           G C    +  A +L+  +  +GC PD ++Y  ++  L    +  E   L+ +M++     
Sbjct: 252 GMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKP 311

Query: 311 SNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
           + + H          G++EEA  L+  M + G  PD   Y  ++ GFCR G LD A + L
Sbjct: 312 NVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFL 371

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           + M   GC P+ V+Y   + GLC  GK+ +A E+    +E    PN  +Y+ +   L   
Sbjct: 372 EYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSS 431

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G    A +++ +++ +G  P  +  N LI  LCR+G +D A + + +  +     NVV++
Sbjct: 432 GDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSY 491

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
             ++ G C+     +A+ +L  M      P+  TY  +I+ +  +G   EA EL
Sbjct: 492 NIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 208/439 (47%), Gaps = 29/439 (6%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           L+   C   +  +++  ++ M  KG +PD +        LC +        L++   N  
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVI--------LCTK--------LIKGFFNSR 118

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           N+    G+     E++ +  +    PDV  Y A+++GF +  +L+ A ++L +M   G  
Sbjct: 119 NI----GKATRVMEILERYGK----PDVFAYNALISGFIKANQLENANRVLDRMKSRGFL 170

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+ V+Y   +   C  GK   A E+     ++   P  ITY++++     +G +  A  +
Sbjct: 171 PDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKL 230

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           + EM+ KG  P  +  N +I+ +C+E  +D A + ++   ++GC  +++ +  L+R    
Sbjct: 231 LDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLS 290

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           +G   E   L+ +M      P+ VT++ +I  L ++G+VEEA  L+  M  KGL P    
Sbjct: 291 RGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYC 350

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKV 608
           Y  +I  +C+ GR++   + LE M+S   C      YN ++  LC  G  ++A ++  K+
Sbjct: 351 YDPLIAGFCREGRLDLATEFLEYMIS-DGCLPDIVNYNTIMAGLCRTGKADQALEVFEKL 409

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
                  + S+ + L  +  + G    A ++  ++ N+ + PD      +   L  +G  
Sbjct: 410 DEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMV 469

Query: 669 EEADTLMLRFVERGHIQPK 687
           +EA  L++  ++ G  +P 
Sbjct: 470 DEAIELLVD-MQSGRYRPN 487


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 253/490 (51%), Gaps = 25/490 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           IV+ +++ +  + +    A +   +M  +GI  + E  + ++  + +  ++  A  + + 
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  ++  +   N  ++VL    KL KA  F+  M+  G  PNV++YN +I GY     
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           I+ A +++D M +KG  PD  +Y +++  +CKE                       GR+E
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKE-----------------------GRLE 336

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA  L ++M ++G +P+ VTY  +++G+C  G+L++A     +M   G  P+  +Y   +
Sbjct: 337 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 396

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           + L   G+  EA +MI    ++   P+AITY+++++G  R G   +A D+  EM+ KG  
Sbjct: 397 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIE 456

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           PT V    LI  L R  +M  A    ++ L++G + +V+ F +++ G C  G++E A  L
Sbjct: 457 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFML 516

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L +M      PD VT+ T++    + G+VEEA  L+ +M  +G+ P  ++Y T+I  Y +
Sbjct: 517 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGR 576

Query: 562 VGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G ++D  ++ ++MLS     T   YN +I+ LC     + A ++L +++      D ST
Sbjct: 577 RGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDST 636

Query: 620 CHVLVESYLN 629
              L+E   N
Sbjct: 637 YLSLIEGMGN 646



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 184/366 (50%), Gaps = 16/366 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           ++ + + Y  ++   S     +GA+R+L  M  +GIE  P++++Y  L+    + G+L  
Sbjct: 280 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE--PDSYTYGSLISGMCKEGRLEE 337

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +   M +  + PN +  NT I        L +A  + + M   GI P+V TYN L+ 
Sbjct: 338 ASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 397

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
                 R+ +A  +I EM  KG  PD ++Y  ++    +    K+  DL  +M++     
Sbjct: 398 ALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEP 457

Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                     +   + R++EA +L  ++   G  PDV+ + A+V+G C  G +++A  +L
Sbjct: 458 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLL 517

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           ++M      P+ V++   + G C  GK  EAR +++  +     P+ I+Y+ ++ G  R 
Sbjct: 518 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRR 577

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G + +A  V  EM+  GF PT +  N LI+ LC+  + D A++ ++E +NKG + +   +
Sbjct: 578 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 637

Query: 483 TSLIRG 488
            SLI G
Sbjct: 638 LSLIEG 643



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 174/370 (47%), Gaps = 3/370 (0%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           R +EA +    M + G +P + T   +++ F ++  ++ A  +  +M+         ++ 
Sbjct: 194 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 253

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             +N LC  GK  +ARE I   E   + PN ++Y+ ++HG    G +  A  ++  M  K
Sbjct: 254 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 313

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P       LI  +C+EG+++ A     + +  G   N V + +LI G+C KGDLE A
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 373

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
            S  D+M      P   TY  ++ AL   GR+ EA +++ +M  KG++P  +TY  +I+ 
Sbjct: 374 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 433

Query: 559 YCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           Y + G  +    L  +MLSK  +     Y  +I  L     ++EA  +  K+L      D
Sbjct: 434 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 493

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
               + +V+ +   G    A+ +   M  +++ PD      + +    EGK EEA  L+ 
Sbjct: 494 VIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLD 553

Query: 677 RFVERGHIQP 686
               RG I+P
Sbjct: 554 EMKRRG-IKP 562



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 2/244 (0%)

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
           + +  +LL++  C   + D A K       KG    +     ++  F +   +E A  L 
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 237

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
            +M+  +      T+  +++ L K G++++A E +  M   G  P VV+Y T+IH Y   
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 297

Query: 563 GRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           G +E   ++L+ M  K  +     Y  +I  +C  G LEEA  +  K++      +A T 
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 357

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
           + L++ Y NKG    A+     M  + ++P +     +   L +EG+  EAD ++    +
Sbjct: 358 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 417

Query: 681 RGHI 684
           +G I
Sbjct: 418 KGII 421


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 169/632 (26%), Positives = 274/632 (43%), Gaps = 67/632 (10%)

Query: 122 RVALQFFYWADRQ--WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECR---- 175
           R+AL+F  W  +Q     +H   +Y +   IL K ++   AK +LR + + GI  +    
Sbjct: 91  RLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFG 150

Query: 176 ------------PEAFSYLMVAYSRAGKLRNA--------------------MYVLSM-- 201
                       P  F  L+  Y + G +  A                    M + SM  
Sbjct: 151 ALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVK 210

Query: 202 -------------MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
                        M    + PN+   N  I+ L V   L KA   L++M+  G  P ++T
Sbjct: 211 DKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 270

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           YN L+  YC   R K AI+LID M  KG   D  +Y   +  LC   R  +   L++KM 
Sbjct: 271 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 330

Query: 309 NDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
            +             N F  +G+I  A ++ N+MS+    P+ VTY A++ G C VG+ +
Sbjct: 331 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 390

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A ++L  M   G + N V+Y   LNGLC + K   A+ ++            I Y+V++
Sbjct: 391 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 450

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            GL + G L EA  +V  M K G  P  +  + LI   CR G +  AK+ +      G  
Sbjct: 451 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 510

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
           +N + +++LI  FCQ G++ EA+ +   M       D  T   ++ +L ++G++ EA + 
Sbjct: 511 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 570

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCS 594
           +  M   GLVP  +TY  +I+ Y  +G   +     + M+   +      Y  +++ LC 
Sbjct: 571 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 630

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            G L EA K L ++       D+   + L+      G    A  +  +M   N++PD   
Sbjct: 631 GGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 690

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
              +   L  +GK+  A  L    + RG + P
Sbjct: 691 YSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFP 722



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/523 (24%), Positives = 229/523 (43%), Gaps = 54/523 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  ++    +    + AK ++  M R G+      +S L+  + + G +  AM V 
Sbjct: 477 DVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVY 536

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           ++M       +   CN  +  L    KL +A +FL  M   G+ PN +TY+C+I GY  +
Sbjct: 537 AVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSI 596

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLF 314
               +A    D+M   G  P   +Y +++  LCK   + E +  + ++       DS ++
Sbjct: 597 GDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMY 656

Query: 315 HD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR---------------- 351
           +         G + EA  L ++M Q   +PD  TY++++ G CR                
Sbjct: 657 NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 716

Query: 352 --------------------VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
                                G    A    ++M   G  P+TV++ A ++     G+ +
Sbjct: 717 RGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMM 776

Query: 392 EAREMINTSEEEWWT--PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
           +A +  +T    WW   PN  TY++++HG  ++  L     +   M+++G FP  +  + 
Sbjct: 777 KANDFFSTMR--WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHS 834

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI  L + G  D   K + + + +G   +   F  LI  + + G + +A  L++ M    
Sbjct: 835 LILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLG 894

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             PD  TY  I + L+K     E+T ++ +ML  G++P    Y T+I+  C+VG ++   
Sbjct: 895 VFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAF 954

Query: 570 KLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           KL ++M  L       A + ++  L   G  E+A  +L  +LR
Sbjct: 955 KLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLR 997



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 250/553 (45%), Gaps = 26/553 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+L  M   G+      +  L+    +  K   A  +L  M+      ++++ + A  
Sbjct: 392 ALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR----VNDMVVGHIAYT 447

Query: 220 VLVVG----NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
           VL+ G      L +A++ +  M   G+ P+V+TY+ LI G+C +  IK A ++I  M   
Sbjct: 448 VLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRS 507

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-------------VNDSNLFHDQGRIEE 322
           G   +K+ Y T++   C+   + E   +   M             V  S+L  D G++ E
Sbjct: 508 GLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD-GKLGE 566

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A++ +  MS++G +P+ +TY  ++NG+  +G+   A      M   G  P+  +Y + L 
Sbjct: 567 AEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLK 626

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC  G  +EA++ +N         +++ Y+ ++    + G L EA  +  +MV+    P
Sbjct: 627 GLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP 686

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV-NVVNFTSLIRGFCQKGDLEEALSL 501
                + L+  LCR+GK   A       + +G    N V +T L+ G  + G  + A   
Sbjct: 687 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYF 746

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            ++M      PDTV +  IID+ S+ G++ +A +    M   G+ P + TY  ++H + +
Sbjct: 747 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 806

Query: 562 VGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
              +   L L   M+ +     +  ++ +I  L   G  +   K+LGK++   + AD  T
Sbjct: 807 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFT 866

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
            ++L+  Y   G    A+ +   M    + PD      +   L  +    E+  ++   +
Sbjct: 867 FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 926

Query: 680 ERGHIQPKSEEHL 692
           E G I PK  +++
Sbjct: 927 ENGVI-PKHAQYI 938



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 184/414 (44%), Gaps = 24/414 (5%)

Query: 154  TKLCQGAKRVLRL------MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV 207
            T LC+  K V  +      M R  +      ++ L+   S+AG  + A Y    M K   
Sbjct: 696  TGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGT 755

Query: 208  APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
             P+ +  N  I       ++ KA  F   M+  G+ PN+ TYN L+ G+     +   + 
Sbjct: 756  CPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLS 815

Query: 268  LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FH 315
            L   M  +G  PDK+++++++  L K         L+ KM+ +  L            + 
Sbjct: 816  LYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYS 875

Query: 316  DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
            + G++ +A +LVN M+ +G  PD  TY  + NG  +     ++  +L +M  +G  P   
Sbjct: 876  ESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHA 935

Query: 376  SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
             Y   +NG+C  G    A ++ +  E   +  + +  S ++ GL   GK  +A  V+  M
Sbjct: 936  QYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHM 995

Query: 436  VKKGFFPTPVEINLLIQSLCREGKMDGA---KKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            ++    PT      L+   CR+ K+  A   K  M+ C   G  ++VV +  LI G C  
Sbjct: 996  LRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC---GLKLDVVAYNVLIMGMCAN 1052

Query: 493  GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            GD   A  L ++M      P+  TY  ++DA+S    + +  +L+  +  +GL+
Sbjct: 1053 GDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1106



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 193/442 (43%), Gaps = 15/442 (3%)

Query: 179  FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL-RFLERM 237
            ++ L+    ++G L  A+ +   M +  V P+    ++ +  L    K   A+  F   M
Sbjct: 656  YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 715

Query: 238  QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
                + PN + Y CL+ G       K A    +EM  KG  PD V++  ++    +  ++
Sbjct: 716  GRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQM 775

Query: 298  KEVRDLMEKM--------VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
             +  D    M        +   N+    F  +  +     L + M + G  PD +T+ ++
Sbjct: 776  MKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSL 835

Query: 346  VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
            + G  + G  D   K+L +M   G   +  ++   +N    +GK  +A +++N       
Sbjct: 836  ILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGV 895

Query: 406  TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
             P+  TY+ + +GL ++    E+  V+ EM++ G  P   +   LI  +CR G + GA K
Sbjct: 896  FPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFK 955

Query: 466  FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
               E    G   + V  ++++RG    G  E+A+ +LD M   +  P   T+TT++    
Sbjct: 956  LKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFC 1015

Query: 526  KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--T 583
            ++ ++ EA +L   M   GL   VV Y  +I   C  G      +L E+M  +  C   T
Sbjct: 1016 RDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNIT 1075

Query: 584  AYNQVIENLCSFGYLEEAGKIL 605
             Y  +++ + +   L +  K+L
Sbjct: 1076 TYAVLVDAISAANNLIQGEKLL 1097



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 141/326 (43%), Gaps = 14/326 (4%)

Query: 128  FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS 187
            F+   R W    +   Y ++L   SK +       +   M R GI      F  L++  S
Sbjct: 781  FFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLS 840

Query: 188  RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
            ++G     + +L  M       +    N  I+      K+ KA   +  M   G+ P+  
Sbjct: 841  KSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRD 900

Query: 248  TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK---EVRDLM 304
            TYN +  G       +++  ++ EM   G  P    Y T++  +C+   I+   +++D M
Sbjct: 901  TYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 960

Query: 305  EKMVNDSN----------LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
            E +   S+          L H  G+ E+A  +++ M +M  +P + T+T +++ FCR  +
Sbjct: 961  EALGFGSHEVAESAMVRGLLH-CGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK 1019

Query: 355  LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
            + +A K+   M   G K + V+Y   + G+C NG S  A E+          PN  TY+V
Sbjct: 1020 IAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAV 1079

Query: 415  VMHGLRREGKLSEACDVVREMVKKGF 440
            ++  +     L +   ++ ++ ++G 
Sbjct: 1080 LVDAISAANNLIQGEKLLTDLQERGL 1105


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 251/504 (49%), Gaps = 37/504 (7%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y+ D I+   +++    ++    A RV+ ++ + G   +P+ F+Y  ++  + +A ++ +
Sbjct: 6   YQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG---KPDVFAYNAVISGFCKANRIES 62

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR-FLERMQLAGITPNVLTYNCLI 253
           A  VL  M++   +P+++  N  I       K+  AL+ F E ++     P ++TY  LI
Sbjct: 63  AKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILI 122

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
           + Y     I +A+KL+DEM  +G  PD  +Y  +   LCKE                   
Sbjct: 123 EAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKE------------------- 163

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
               G+++ A E V  ++  GC PDV+TY  ++      G+ D+ +K + +++  GC+PN
Sbjct: 164 ----GKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPN 219

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            V+Y+  ++ LC +GK  E+  ++   +E+  TP+A  Y  ++    REGKL  A + + 
Sbjct: 220 VVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLD 279

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            M+  GF P  V  N ++ +LC+ G  D A +   +    GC  NV ++ +++      G
Sbjct: 280 CMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSG 339

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           D   AL ++  M     DPD +TY ++I  L ++G V+EA  L+  MLS    P +V+Y+
Sbjct: 340 DRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYK 399

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           TV+   C+  R++D +++L  M+    Q   T Y  +IE +   G   +A ++   +   
Sbjct: 400 TVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIM 459

Query: 612 ASKADASTCHVLVESYLNKGIPLL 635
            + ++ S         LNK  PLL
Sbjct: 460 NAISEDSF------KRLNKTFPLL 477



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 241/458 (52%), Gaps = 16/458 (3%)

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           P++++C   I        + KA R +  ++  G  P+V  YN +I G+C  +RI+ A  +
Sbjct: 8   PDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTV 66

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN-------------LFH 315
           +D M  KG SPD V++  ++G  C + +I     + E+++ D+N              + 
Sbjct: 67  LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
            +G I+EA +L+++M   G  PD  TY  +  G C+ G++D+A + ++ +   GCKP+ +
Sbjct: 127 LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI 186

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y   L  L + GK  E  + ++        PN +TYS+++  L R+GK+ E+ ++V+ M
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM 246

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            +KG  P     + LI + CREGK+D A +F+   +  G   ++VN+ +++   C+ G+ 
Sbjct: 247 KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNG 306

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           + A+ +   +      P+  +Y T++ AL  +G    A  ++ +MLSKG+ P V+TY ++
Sbjct: 307 DHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSL 366

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I   C+ G V++ + LL  MLS   Q    +Y  V+  LC    +++A ++L  ++    
Sbjct: 367 ISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGC 426

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           + + +T  +L+E     G    A ++A  ++  N I +
Sbjct: 427 QPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISE 464



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 190/377 (50%), Gaps = 5/377 (1%)

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           F +   I++A  ++  + + G  PDV  Y AV++GFC+   ++ AK +L +M   G  P+
Sbjct: 20  FFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPD 78

Query: 374 TVSYTAFLNGLCHNGK-SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
            V++   +   C  GK  L  +      ++    P  ITY++++     EG + EA  ++
Sbjct: 79  VVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLL 138

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            EM+ +G  P     N++ + LC+EGK+D A +F++   ++GC  +V+ +  L+R    +
Sbjct: 139 DEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQ 198

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G  +E    + +++    +P+ VTY+ +I +L ++G++EE+  L+  M  KGL P    Y
Sbjct: 199 GKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCY 258

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLR 610
             +I  +C+ G+++  ++ L+ M+          YN ++  LC  G  + A +I GK+  
Sbjct: 259 DPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDE 318

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                + S+ + ++ +  + G    A  +  +M ++ + PD+     +   L  +G  +E
Sbjct: 319 VGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDE 378

Query: 671 ADTLMLRFVERGHIQPK 687
           A  L+   +  G  QP 
Sbjct: 379 AIGLLADMLS-GRFQPN 394



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 4/208 (1%)

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +V+  T LI+GF    ++++A  ++  +    K PD   Y  +I    K  R+E A  ++
Sbjct: 9   DVILCTKLIKGFFNSRNIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANRIESAKTVL 67

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCS 594
            +M  KG  P VVT+  +I  +C  G+++  LK+ E++L    C+     Y  +IE    
Sbjct: 68  DRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYIL 127

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            G ++EA K+L ++L    + D  T +V+      +G    A++    + +R   PD+  
Sbjct: 128 EGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVIT 187

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERG 682
              +   L+ +GK +E +  M     RG
Sbjct: 188 YNILLRALLNQGKWDEGEKWMSEIFSRG 215


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 249/481 (51%), Gaps = 22/481 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A RVLR     G      A++ L+  Y R G+L  A  +++ M    V P+       I 
Sbjct: 93  AARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIR 149

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    ++  AL  L+ M   G  P+V+TY  L++  C      +A+ ++DEM  KGC+P
Sbjct: 150 GLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTP 209

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELV 327
           + V+Y  ++  +C+E R+ + ++++ ++         V+ + +        R ++ K L 
Sbjct: 210 NIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLF 269

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M    C+P+ VT+  +V  FCR G +++A ++LQQM  HGC PNT      +N +C  
Sbjct: 270 AEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQ 329

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G+  +A + +N        P+ I+Y+ V+ GL R G+   A +++ EMV+K   P  V  
Sbjct: 330 GRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTF 389

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N  I  LC++G ++ A K ++     GC+V +V + +L+ GFC +G ++ AL L +++  
Sbjct: 390 NTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL-- 447

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
              +P+T+TYTT++  L    R++ A EL+  M+ K      VT+  ++  +CQ G VE+
Sbjct: 448 -PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEE 506

Query: 568 LLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
            ++L+ +M+ +  C      +N +++ +      EEA ++L  ++      D  T   +V
Sbjct: 507 AMELVNQMM-EHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVV 565

Query: 625 E 625
           +
Sbjct: 566 D 566



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 256/525 (48%), Gaps = 31/525 (5%)

Query: 160 AKRVLRLMARRGIECRPEAF--SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A R++   + RG    P+ +  + L+    R G+  +A  VL   + +    ++   NT 
Sbjct: 58  AARLVETSSSRGEA--PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTL 115

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +       +L  A R +  M    + P+  TY  +I+G CD  R+ DA+ L+D+M  +GC
Sbjct: 116 VAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGC 172

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
            P  V+Y  ++  +CK     E                       A  ++++M   GC P
Sbjct: 173 QPSVVTYTVLLEAVCKSSGFGE-----------------------AMNVLDEMRAKGCTP 209

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           ++VTY  ++NG CR G +D AK++L ++  +G +P+ VSYT  L GLC   +  + + + 
Sbjct: 210 NIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLF 269

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
               ++   PN +T+ +++    R G +  A  V+++M + G  P     N++I ++C++
Sbjct: 270 AEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQ 329

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G++D A  F+      GC  + +++T+++RG C+ G  E A  LL +M      P+ VT+
Sbjct: 330 GRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTF 389

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
            T I  L + G +E+A +L+  M   G    +VTY  ++H +C  GRV+  L+L   +  
Sbjct: 390 NTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPC 449

Query: 578 KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
           +    T Y  ++  LC    L+ A ++L  +++     +A T +VLV  +  KG    A 
Sbjct: 450 EPNTIT-YTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAM 508

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++  +M      P+L     + + +  +  SEEA  L+   V +G
Sbjct: 509 ELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 553



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 240/482 (49%), Gaps = 21/482 (4%)

Query: 167 MARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           M +RG  C+P   +Y  L+ A  ++     AM VL  M+     PN++  N  I+ +   
Sbjct: 167 MLQRG--CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 224

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            ++  A   L R+   G  P++++Y  ++KG C   R  D   L  EM  K C P++V++
Sbjct: 225 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 284

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
             ++ + C+   ++    ++++M                N    QGR+++A + +N M  
Sbjct: 285 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 344

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            GC PD ++YT V+ G CR G  + AK++L +M    C PN V++  F+  LC  G   +
Sbjct: 345 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 404

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A ++I    E   +   +TY+ ++HG   +G++  A ++   +  +   P  +    L+ 
Sbjct: 405 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLT 461

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC   ++D A + +   + K C +N V F  L+  FCQKG +EEA+ L++ M      P
Sbjct: 462 GLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 521

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           + +T+ T++D ++K+   EEA EL+  ++SKG+    +TY +V+    +  R E+ +++L
Sbjct: 522 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQML 581

Query: 573 EKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
             +  +  +     YN+++  LC     ++A      ++      + ST  +L+E   ++
Sbjct: 582 HAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHE 641

Query: 631 GI 632
           G+
Sbjct: 642 GL 643



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 223/451 (49%), Gaps = 19/451 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVL 199
           + Y +++  + +      AK +L  ++  G +  P+  SY  V      A +  +   + 
Sbjct: 212 VTYNVIINGMCREGRVDDAKEILNRLSSYGFQ--PDIVSYTTVLKGLCAARRWDDVKVLF 269

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M      PN +  +  +     G  + +A++ L++M   G TPN    N +I   C  
Sbjct: 270 AEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQ 329

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R+ DA   ++ M + GC+PD +SY TV+  LC+  R +  ++L+ +MV  +        
Sbjct: 330 GRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTF 389

Query: 312 NLF----HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N F      +G IE+A +L+  M + GC   +VTY A+V+GFC  G +D A ++   +  
Sbjct: 390 NTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL-- 447

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
             C+PNT++YT  L GLCH  +   A E++    ++    NA+T++V++    ++G + E
Sbjct: 448 -PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEE 506

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A ++V +M++ G  P  +  N L+  + ++   + A + +   ++KG +++ + ++S++ 
Sbjct: 507 AMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVD 566

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
              ++   EEA+ +L  +      P    Y  I+ AL K    ++A +    M+S G +P
Sbjct: 567 VLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMP 626

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
              TY  +I      G +++   +L ++ +K
Sbjct: 627 NESTYIILIEGLAHEGLLKEARYVLSELYAK 657



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 207/427 (48%), Gaps = 19/427 (4%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA--YSRAGK 191
            + ++ D + Y  +L+ L   +     K +   M  +  +C P   ++ M+   + R G 
Sbjct: 239 SYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK--KCVPNEVTFDMLVRFFCRGGM 296

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +  A+ VL  M +    PN  +CN  I+ +    ++  A  FL  M + G  P+ ++Y  
Sbjct: 297 VERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTT 356

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---- 307
           +++G C   R + A +L+ EM  K C P++V++ T +  LC++  I++   L+E M    
Sbjct: 357 VLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG 416

Query: 308 -----VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                V  + L H    QGR++ A EL N +    C P+ +TYT ++ G C    LD A 
Sbjct: 417 CSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAA 473

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++L  M    C  N V++   ++  C  G   EA E++N   E   TPN IT++ ++ G+
Sbjct: 474 ELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGI 533

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            ++    EA +++  +V KG     +  + ++  L RE + + A + +    + G    V
Sbjct: 534 TKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKV 593

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
             +  ++   C++ + ++A+     M      P+  TY  +I+ L+  G ++EA  ++ +
Sbjct: 594 GMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSE 653

Query: 540 MLSKGLV 546
           + +KG++
Sbjct: 654 LYAKGVL 660



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 158/334 (47%), Gaps = 13/334 (3%)

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           +L +A ++++     G  P+    T  +  LC  G++ +A  ++ T+E      +   Y+
Sbjct: 54  DLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYN 113

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI---NLLIQSLCREGKMDGAKKFMQEC 470
            ++ G  R G+L    D  R ++     P P +      +I+ LC  G++  A   + + 
Sbjct: 114 TLVAGYCRYGRL----DAARRLIAS--MPVPPDAYTYTPIIRGLCDRGRVGDALALLDDM 167

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           L +GC  +VV +T L+   C+     EA+++LD+M      P+ VTY  II+ + + GRV
Sbjct: 168 LQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRV 227

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQ 587
           ++A E++ ++ S G  P +V+Y TV+   C   R +D+  L  +M+ K KC      ++ 
Sbjct: 228 DDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK-KCVPNEVTFDM 286

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           ++   C  G +E A ++L ++ +     + + C++++ +   +G    AY     M    
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 346

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
             PD      V   L   G+ E A  L+   V +
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRK 380



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 2/201 (0%)

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           +R    + DL EA  L++      + PD    T +I  L + GR  +A  ++    + G 
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
              V  Y T++  YC+ GR++   +L+  M       T Y  +I  LC  G + +A  +L
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYT-YTPIIRGLCDRGRVGDALALL 164

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
             +L+   +    T  VL+E+         A  V   M  +   P++     +   +  E
Sbjct: 165 DDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 224

Query: 666 GKSEEADTLMLRFVERGHIQP 686
           G+ ++A  ++ R    G  QP
Sbjct: 225 GRVDDAKEILNRLSSYG-FQP 244


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 241/457 (52%), Gaps = 22/457 (4%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +    PN +  N  ++      +     R LE M   GI PNV++YN L++G C L R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 262 IKDAIKLIDEMPLKG--CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
             +A +L+ +M  +G   +PD V+Y T++   CK  +++E R+L++++++     D+ ++
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 315 HD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                      R+ EA EL+ +M + GC P ++T+  +++G CR   L+ A  +LQ M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G K + V+Y   ++GLC  G+  EA +++   +     P+ + YS  ++GL + GK+  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK-GCAVNVVNFTSLI 486
           A  V+ +M      P  V  N ++  LC+ GK+D A + M++  +  GC +NVV +++++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C+ G  +EA S+++ M      PD VTY+++++ L K G++EEA E + +M  +G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR-------TAYNQVIENLCSFGYLE 599
           P  VTY +++H  C  GR+ +  +++E+M S            + YN +I  LC  G ++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
           +A K   ++       D  +   +VE     G  L A
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 203/381 (53%), Gaps = 22/381 (5%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           R  R   D + Y  +L    K    + ++ +L+ +  RG+  RP+A  Y  +M +  ++ 
Sbjct: 74  RGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGL--RPDALMYTKVMASLCKSA 131

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L  A+ +L  M +A   P L+  NT I        L  A   L+ M  +G+  +V+TYN
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYN 191

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN- 309
            L+ G C   R+++A +L++ M   GC+PD V+Y + +  LCK  ++     ++E+M + 
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDS 251

Query: 310 --DSNLFH---------DQGRIEEAKELVNQM-SQMGCIPDVVTYTAVVNGFCRVGELDQ 357
             D N+             G+I+ A E++ QM S  GC  +VV Y+ VV+G C++G   +
Sbjct: 252 DHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A+ +++ M   GC+P+ V+Y++ +NGLC  GK  EA E +     E   PNA+TY  ++H
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 418 GLRREGKLSEACDVVREMVKKGFF-----PTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           GL   G+L+EA  +V EM   G       P+    N LI  LC+ G++D A KF Q   +
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431

Query: 473 KGCAVNVVNFTSLIRGFCQKG 493
           +GC  + V++++++ G  + G
Sbjct: 432 QGCDPDGVSYSTIVEGLARSG 452



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 151/315 (47%), Gaps = 42/315 (13%)

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   GC PN+V++ A +NG    G+  +   ++ T       PN ++Y+ ++ GL +  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             EA ++VR+M+ +G   TP                                 ++V +++
Sbjct: 61  WHEAEELVRDMISRGGRSTP---------------------------------DLVTYST 87

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L+ G+C+ G +EE+  LL ++      PD + YT ++ +L K+ R+ EA EL+ +M+  G
Sbjct: 88  LLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAG 147

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAG 602
             PT++T+ T+I   C+   +E    LL+ M +   +     YN +++ LC  G L+EA 
Sbjct: 148 CCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAE 207

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           ++L ++  +    D       V      G  L A++V  +M + +  P++     V+   
Sbjct: 208 QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNV-----VTYNT 262

Query: 663 ILEG--KSEEADTLM 675
           IL+G  KS + DT +
Sbjct: 263 ILDGLCKSGKIDTAL 277


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 247/493 (50%), Gaps = 43/493 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  DP+ + ++L       LC  +  +L  + + GI   PE+ + ++        L  A+
Sbjct: 194 FSSDPVSFDLLL-------LCLPSAPLLLRLRQYGISPSPESCNAVLCRL----PLDEAV 242

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   + +     N    N  +  L    ++  A +  + M      P+V+TY  ++ GY
Sbjct: 243 QLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGY 295

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C L  ++ AIKL+ EM  +G   + V+Y +V+  LC                       D
Sbjct: 296 CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLC-----------------------D 332

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G++ +A  +V  M   G + D   +T V++GFCR G+L  A+    +M   G   + V+
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YTA +NGLC  G+  EA  ++   E++    +A+TY+V++ G  + GK++EA  V  +MV
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +K   P  V    L   LC++G +  A + + E  +KG  +N+  + SLI G C+ G+LE
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +A+  + DM      PD  TYTTII AL ++  ++ A  L+ +ML KG+ PT+VTY  ++
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 557 HRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           + +C  GRVE   +LLE ML K      T YN +++  C    ++   +I   +L     
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 615 ADASTCHVLVESY 627
            + +T ++L++ +
Sbjct: 633 PNENTYNILIKGH 645



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/523 (24%), Positives = 249/523 (47%), Gaps = 38/523 (7%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +++ L+ A   AG++++A  +   M   A  P+++     +H     ++L  A++ L  M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G+  N + Y  +I   CD  ++ DA++++++M + G   D   + TVM   C++  +
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 298 KEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
              R+  ++M         V  + L +     G ++EA+ ++ +M   G   D VTYT +
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G+C+VG++ +A  +  +M      PN V+YTA  +GLC  G    A E+++    +  
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
             N  TY+ +++GL + G L +A   + +M + G  P       +I +LC+  ++D A  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            +QE L+KG    +V +  L+ GFC  G +E    LL+ M      P+T TY +++    
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
               ++  TE+   MLS+ +VP   TY  +I  +C+   +++ L    +M+ K  +   +
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
           +YN +I  L       EA ++  K+ +    A+    +  ++   N+             
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNED------------ 719

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTL------MLRFVE 680
              NL   L LC ++ E  +++  ++  D        ++RF+E
Sbjct: 720 ---NLESTLALCDELVEVTLVKSIADTDDDFAEEHISIMRFLE 759



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 125/304 (41%), Gaps = 23/304 (7%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           Q R   + + Y  + + L K      A  +L  M  +G+E     ++ L+    +AG L 
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            AM  +  M +A + P++    T I  L    +L +A   L+ M   GI P ++TYN L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            G+C   R++   +L++ M  K   P+  +Y ++M   C EK +K   ++ + M++    
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE-- 630

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                                 +P+  TY  ++ G C+   + +A     +M   G +  
Sbjct: 631 ---------------------VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             SY A +  L    K  EAR +     +E  T     Y+  +     E  L     +  
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCD 729

Query: 434 EMVK 437
           E+V+
Sbjct: 730 ELVE 733



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 121/260 (46%), Gaps = 9/260 (3%)

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L EA  + +E+ +K         N+L+++LC  G++  A +   E        +VV +  
Sbjct: 238 LDEAVQLFQELPEKN----TCSYNILLKALCTAGRIKDAHQLFDE---MASPPDVVTYGI 290

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           ++ G+C   +LE A+ LL +M     + + V YT++I  L   G+V +A  ++  M+  G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAG 602
           +V     + TV+  +C+ G +       ++M  +        Y  +I  LC  G L+EA 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           ++L ++       DA T  VL++ Y   G    A+ V  +M  + + P++     +S+ L
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 663 ILEGKSEEADTLMLRFVERG 682
             +G    A+ L+     +G
Sbjct: 471 CKQGDVCAANELLHEMCSKG 490


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 247/493 (50%), Gaps = 43/493 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  DP+ + ++L       LC  +  +L  + + GI   PE+ + ++        L  A+
Sbjct: 194 FSSDPVSFDLLL-------LCLPSAPLLLRLRQYGISPSPESCNAVLCRL----PLDEAV 242

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   + +     N    N  +  L    ++  A +  + M      P+V+TY  ++ GY
Sbjct: 243 QLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGY 295

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C L  ++ AIKL+ EM  +G   + V+Y +V+  LC                       D
Sbjct: 296 CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLC-----------------------D 332

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G++ +A  +V  M   G + D   +T V++GFCR G+L  A+    +M   G   + V+
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YTA +NGLC  G+  EA  ++   E++    +A+TY+V++ G  + GK++EA  V  +MV
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +K   P  V    L   LC++G +  A + + E  +KG  +N+  + SLI G C+ G+LE
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +A+  + DM      PD  TYTTII AL ++  ++ A  L+ +ML KG+ PT+VTY  ++
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 557 HRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           + +C  GRVE   +LLE ML K      T YN +++  C    ++   +I   +L     
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 615 ADASTCHVLVESY 627
            + +T ++L++ +
Sbjct: 633 PNENTYNILIKGH 645



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 221/445 (49%), Gaps = 17/445 (3%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +++ L+ A   AG++++A  +   M   A  P+++     +H     ++L  A++ L  M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G+  N + Y  +I   CD  ++ DA++++++M + G   D   + TVM   C++  +
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 298 KEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
              R+  ++M         V  + L +     G ++EA+ ++ +M   G   D VTYT +
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G+C+VG++ +A  +  +M      PN V+YTA  +GLC  G    A E+++    +  
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
             N  TY+ +++GL + G L +A   + +M + G  P       +I +LC+  ++D A  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            +QE L+KG    +V +  L+ GFC  G +E    LL+ M      P+T TY +++    
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
               ++  TE+   MLS+ +VP   TY  +I  +C+   +++ L    +M+ K  +   +
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 584 AYNQVIENLCSFGYLEEAGKILGKV 608
           +YN +I  L       EA ++  K+
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKM 696



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 125/304 (41%), Gaps = 23/304 (7%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           Q R   + + Y  + + L K      A  +L  M  +G+E     ++ L+    +AG L 
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            AM  +  M +A + P++    T I  L    +L +A   L+ M   GI P ++TYN L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            G+C   R++   +L++ M  K   P+  +Y ++M   C EK +K   ++ + M++    
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE-- 630

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                                 +P+  TY  ++ G C+   + +A     +M   G +  
Sbjct: 631 ---------------------VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             SY A +  L    K  EAR +     +E  T     Y+  +     E  L     +  
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCD 729

Query: 434 EMVK 437
           E+V+
Sbjct: 730 ELVE 733



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 121/260 (46%), Gaps = 9/260 (3%)

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L EA  + +E+ +K         N+L+++LC  G++  A +   E        +VV +  
Sbjct: 238 LDEAVQLFQELPEKN----TCSYNILLKALCTAGRIKDAHQLFDE---MASPPDVVTYGI 290

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           ++ G+C   +LE A+ LL +M     + + V YT++I  L   G+V +A  ++  M+  G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAG 602
           +V     + TV+  +C+ G +       ++M  +        Y  +I  LC  G L+EA 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           ++L ++       DA T  VL++ Y   G    A+ V  +M  + + P++     +S+ L
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 663 ILEGKSEEADTLMLRFVERG 682
             +G    A+ L+     +G
Sbjct: 471 CKQGDVCAANELLHEMCSKG 490


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 247/493 (50%), Gaps = 43/493 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  DP+ + ++L       LC  +  +L  + + GI   PE+ + ++        L  A+
Sbjct: 194 FSSDPVSFDLLL-------LCLPSAPLLLRLRQYGISPSPESCNAVLCRL----PLDEAV 242

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   + +     N    N  +  L    ++  A +  + M      P+V+TY  ++ GY
Sbjct: 243 QLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGY 295

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C L  ++ AIKL+ EM  +G   + V+Y +V+  LC                       D
Sbjct: 296 CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLC-----------------------D 332

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G++ +A  +V  M   G + D   +T V++GFCR G+L  A+    +M   G   + V+
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YTA +NGLC  G+  EA  ++   E++    +A+TY+V++ G  + GK++EA  V  +MV
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +K   P  V    L   LC++G +  A + + E  +KG  +N+  + SLI G C+ G+LE
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +A+  + DM      PD  TYTTII AL ++  ++ A  L+ +ML KG+ PT+VTY  ++
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 557 HRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           + +C  GRVE   +LLE ML K      T YN +++  C    ++   +I   +L     
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVV 632

Query: 615 ADASTCHVLVESY 627
            + +T ++L++ +
Sbjct: 633 PNENTYNILIKGH 645



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/523 (24%), Positives = 249/523 (47%), Gaps = 38/523 (7%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +++ L+ A   AG++++A  +   M   A  P+++     +H     ++L  A++ L  M
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G+  N + Y  +I   CD  ++ DA++++++M + G   D   + TVM   C++  +
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 298 KEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
              R+  ++M         V  + L +     G ++EA+ ++ +M   G   D VTYT +
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G+C+VG++ +A  +  +M      PN V+YTA  +GLC  G    A E+++    +  
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
             N  TY+ +++GL + G L +A   + +M + G  P       +I +LC+  ++D A  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            +QE L+KG    +V +  L+ GFC  G +E    LL+ M      P+T TY +++    
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
               ++  TE+   MLS+ +VP   TY  +I  +C+   +++ L    +M+ K  +   +
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
           +YN +I  L       EA ++  K+ +    A+    +  ++   N+             
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNED------------ 719

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTL------MLRFVE 680
              NL   L LC ++ E  +++  ++  D        ++RF+E
Sbjct: 720 ---NLESTLALCDELVEVTLVKSIADTDDDFAEEHISIMRFLE 759



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 125/304 (41%), Gaps = 23/304 (7%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           Q R   + + Y  + + L K      A  +L  M  +G+E     ++ L+    +AG L 
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            AM  +  M +A + P++    T I  L    +L +A   L+ M   GI P ++TYN L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            G+C   R++   +L++ M  K   P+  +Y ++M   C EK +K   ++ + M++    
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE-- 630

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                                 +P+  TY  ++ G C+   + +A     +M   G +  
Sbjct: 631 ---------------------VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             SY A +  L    K  EAR +     ++  T     Y+  +     E  L     +  
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCD 729

Query: 434 EMVK 437
           E+V+
Sbjct: 730 ELVE 733



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 121/260 (46%), Gaps = 9/260 (3%)

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L EA  + +E+ +K         N+L+++LC  G++  A +   E        +VV +  
Sbjct: 238 LDEAVQLFQELPEKN----TCSYNILLKALCTAGRIKDAHQLFDE---MASPPDVVTYGI 290

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           ++ G+C   +LE A+ LL +M     + + V YT++I  L   G+V +A  ++  M+  G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAG 602
           +V     + TV+  +C+ G +       ++M  +        Y  +I  LC  G L+EA 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           ++L ++       DA T  VL++ Y   G    A+ V  +M  + + P++     +S+ L
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 663 ILEGKSEEADTLMLRFVERG 682
             +G    A+ L+     +G
Sbjct: 471 CKQGDVCAANELLHEMCSKG 490


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 157/563 (27%), Positives = 272/563 (48%), Gaps = 17/563 (3%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR 165
           L    +   LR + +   ALQ F +      ++H P+ Y++M+E L +         +L 
Sbjct: 38  LHESHVAHALRREPNVLYALQHFQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYILH 97

Query: 166 LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV--V 223
            M    I C  ++F  ++ +Y  +G    A+ +   +++    P + I N  +  L+   
Sbjct: 98  QMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGES 157

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
           GNK        E M+  G+ PNV TYN L+K  C   ++  A KL+ EM  +GC PD VS
Sbjct: 158 GNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVS 217

Query: 284 YYTVMGYLCKEKRIKEVRDL-----MEKMVNDSNLFH----DQGRIEEAKELVNQMSQMG 334
           Y TV+  +C++ R++E R++      E +V+  N        +GR+ E   L+++M   G
Sbjct: 218 YTTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNG 277

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P+VV+Y++V++    VGE++ A  +L +M   GC+PN  ++++ + G    G+  E  
Sbjct: 278 VDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGV 337

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF-PTPVEINLLIQS 453
            +      E   PN + Y+ +++GL   G L+EA DV   M K  F  P     + L+  
Sbjct: 338 GLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHG 397

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
             + G + GA +   + +N G   NVV +TS++   C+    ++A  L+D+M      P 
Sbjct: 398 FVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPT 457

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VT+ T I  L   GRV  A  ++ +M   G +P   TY  ++     V  +++  +L+ 
Sbjct: 458 VVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIR 517

Query: 574 KMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           + L ++K       YN V+    S G  E   ++LG++L    K DA T +V++ +Y   
Sbjct: 518 E-LEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKL 576

Query: 631 GIPLLAYKVACRMF-NRNLIPDL 652
           G    A +   R+   + L PD+
Sbjct: 577 GKVRTAIQFLDRITAGKELCPDI 599



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 221/483 (45%), Gaps = 50/483 (10%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY---------------------- 181
           Y ++L+ L K     GA ++L  M++RG  C P+  SY                      
Sbjct: 183 YNVLLKALCKNGKLDGACKLLVEMSKRG--CVPDGVSYTTVVAAMCEDGRVEEAREVARR 240

Query: 182 ------------LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
                       L+    R G++     ++  M    V PN++  ++ I  L    ++  
Sbjct: 241 FGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVEL 300

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           AL  L +M   G  PNV T++ L+KGY    R+ + + L   M L+G  P+ V Y T++ 
Sbjct: 301 ALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLN 360

Query: 290 YLCKEKRIKEVRDLMEKMVND----------SNLFHD---QGRIEEAKELVNQMSQMGCI 336
            LC    + E  D+  +M  D          S L H     G ++ A E+ N+M   G  
Sbjct: 361 GLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVR 420

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P+VV YT++V+  C+    DQA +++  M   GC P  V++  F+ GLC  G+ L A  +
Sbjct: 421 PNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRV 480

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           ++  +     P+  TY+ ++ GL    +L EAC+++RE+ ++      V  N ++     
Sbjct: 481 VDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSS 540

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD-PDTV 515
            GK +   + +   L  G   + +    +I  + + G +  A+  LD +   K+  PD +
Sbjct: 541 HGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDII 600

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            +T+++  +  +  +EEA   + KML+KG+ P + T+  ++  + +       +++L+ +
Sbjct: 601 AHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKLGHMGPIRILDDI 660

Query: 576 LSK 578
           L K
Sbjct: 661 LGK 663



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 189/411 (45%), Gaps = 31/411 (7%)

Query: 140 DP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP--EAFSYLMVAYSRAGKLRNA 195
           DP  + Y  ++  LS     + A  VL  M RRG  CRP    FS LM  Y   G++   
Sbjct: 279 DPNVVSYSSVISWLSDVGEVELALAVLGKMIRRG--CRPNVHTFSSLMKGYFLGGRVGEG 336

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT-PNVLTYNCLIK 254
           + +  +M    V PN+++ NT ++ L     LA+A+    RM+      PNV TY+ L+ 
Sbjct: 337 VGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVH 396

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G+     ++ A ++ ++M   G  P+ V Y +++  LCK                  N  
Sbjct: 397 GFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCK------------------NSM 438

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
            DQ     A  L++ M+  GC P VVT+   + G C  G +  A +++ QM  +GC P+T
Sbjct: 439 FDQ-----AYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDT 493

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +Y   L+GL    +  EA E+I   EE     N +TY+ VM+G    GK      V+  
Sbjct: 494 RTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGR 553

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL-NKGCAVNVVNFTSLIRGFCQKG 493
           M+  G  P  + +N++I +  + GK+  A +F+      K    +++  TSL+ G C   
Sbjct: 554 MLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSL 613

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
            +EEA+  L+ M      P+  T+  ++    K         ++  +L KG
Sbjct: 614 GIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKLGHMGPIRILDDILGKG 664


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 165/595 (27%), Positives = 285/595 (47%), Gaps = 25/595 (4%)

Query: 123 VALQFFYWADRQWRYRHD----PIVYY--MMLEILSKTKLCQGAKRVLRLMARRGIECRP 176
           +A++ F   DR W   H     P +Y   ++++   +    + A  V   + R G+    
Sbjct: 99  LAVELFKRMDR-WACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDV 157

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
            +++ L+  +S+ G++  A  +   M + +V+P+++  N+ I  L    ++ K+ R LE+
Sbjct: 158 CSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQ 217

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M  AGI PN  TYN LI GY      K+++++  EM   G  P  V+  + +  LC+  R
Sbjct: 218 MVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNR 277

Query: 297 IKEVRDLMEKMV---------NDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTA 344
           IKE +D+ + MV         + S L H    +G       LVN M   G +P+   +  
Sbjct: 278 IKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNI 337

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++N + R G +D+A  + + M + G  P+TV++   ++ LC  G+  +A    N   +  
Sbjct: 338 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 397

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE-INLLIQSLCREGKMDGA 463
             P+   Y  ++ G    G+L +A +++ EM+ K   P  V+  + +I +L +EG++   
Sbjct: 398 VPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEG 457

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           K  M   +  G   NVV F SL+ G+C  G++EEA +LLD M     +P+   Y T++D 
Sbjct: 458 KDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 517

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
             KNGR+++A  +   ML KG+ PT V Y  ++H   Q  R     K+  +M+      +
Sbjct: 518 YCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVS 577

Query: 584 --AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              Y  V+  LC     +EA  +L K+     K D  T ++++ + L  G    A ++  
Sbjct: 578 IQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFA 637

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE--EHLQR 694
            +    L+P +     +   LI E   EEAD L +  VE+    P S    H+ R
Sbjct: 638 AISTYGLVPTVHTYNLMISNLIKEESYEEADNLFIS-VEKSGRAPDSRLLNHIVR 691



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 192/423 (45%), Gaps = 13/423 (3%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           ++ LM  +GI      F+ L+ AY+R G +  AM +   MQ   + P+ +   T I  L 
Sbjct: 319 LVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 378

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              +L  AL     M   G+ P+   Y CLI+G C+   +  A +LI EM  K   P  V
Sbjct: 379 RIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 438

Query: 283 SYYT-VMGYLCKEKRIKEVRDLMEKMVNDSN-----LFHD-------QGRIEEAKELVNQ 329
            Y++ ++  L KE R+ E +D+M+ MV          F+         G +EEA  L++ 
Sbjct: 439 KYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 498

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M+ +G  P+   Y  +V+G+C+ G +D A  + + M H G KP +V Y   L+GL    +
Sbjct: 499 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARR 558

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
           +  A++M +   E   T +  TY VV+ GL R     EA  ++ ++         +  N+
Sbjct: 559 TTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 618

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           +I ++ + G+   AK+        G    V  +  +I    ++   EEA +L   +    
Sbjct: 619 VISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSG 678

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
           + PD+     I+  L K   V +A+  +  +    L     T   +   + + G+  + +
Sbjct: 679 RAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHI 738

Query: 570 KLL 572
           KLL
Sbjct: 739 KLL 741



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 155/330 (46%), Gaps = 13/330 (3%)

Query: 190 GKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           G+L  A  ++S MM K    P +   ++ I+ L    ++A+    ++ M   G  PNV+T
Sbjct: 416 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVT 475

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLM 304
           +N L++GYC +  +++A  L+D M   G  P+   Y T++   CK  RI +     RD++
Sbjct: 476 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 535

Query: 305 EKMVNDSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
            K V  +++ ++          R   AK++ ++M + G    + TY  V+ G CR    D
Sbjct: 536 HKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTD 595

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A  +L++++    K + +++   ++ +   G+  EA+E+          P   TY++++
Sbjct: 596 EANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMI 655

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
             L +E    EA ++   + K G  P    +N +++ L ++ ++  A  ++         
Sbjct: 656 SNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLT 715

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +     + L   F ++G   E + LL   Y
Sbjct: 716 LEASTISLLASLFSREGKCREHIKLLPAKY 745


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 243/514 (47%), Gaps = 32/514 (6%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           R M  R I C   +F+ L+  +    KL  A+     + K    P+L+  +T +H L V 
Sbjct: 100 RKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVE 159

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           +++++AL F  ++      PNV+ +  L+ G C   R+ +A+ L+D M   G  P++++Y
Sbjct: 160 DRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITY 215

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMS 331
            T++  +CK        +L+ KM   S +                 GR  +A+ L ++M 
Sbjct: 216 GTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQ 275

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
           + G  P++ TY  ++NGFC  G   +A+++L++M+     P+ V+++  +N L   GK  
Sbjct: 276 EKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFF 335

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           EA E+ N        PN ITY+ ++ G  ++ +L  A  +   M  KG  P  +  ++LI
Sbjct: 336 EAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILI 395

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
              C   ++D   K + E   +G   N + +T+LI GFCQ G+L  AL LL +M      
Sbjct: 396 DGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVC 455

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKG------------LVPTVVTYRTVIHRY 559
           P+ VT  T++D L  NG++++A E M K++ K             + P V TY  +I   
Sbjct: 456 PNVVTCNTLLDGLCNNGKLKDALE-MFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGL 514

Query: 560 CQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
              G+  +  +L E+M  +        YN VI+ LC    L+EA ++   +       D 
Sbjct: 515 INEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDV 574

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            T   L+  Y   G      +V C M  R ++ +
Sbjct: 575 VTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVAN 608



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 235/479 (49%), Gaps = 29/479 (6%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           AL FF+        + + I +  ++  L +      A  +L  M   G++     +  ++
Sbjct: 165 ALHFFHQI-----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 219

Query: 184 VAYSRAGKLRNAMYVLSMMQKAA-VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
               + G   +A+ +L  M++ + + PN++I +  I  L    +   A      MQ  GI
Sbjct: 220 DGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGI 279

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
           +PN+ TYNC+I G+C   R  +A +L+ EM  +  SPD V++  ++  L KE +  E  +
Sbjct: 280 SPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEE 339

Query: 303 LMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           L  +M+    +            F  Q R++ A+ +   M+  GC PDV+T++ +++G+C
Sbjct: 340 LYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYC 399

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
               +D   K+L +M   G   NT++YT  ++G C  G    A +++         PN +
Sbjct: 400 GAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVV 459

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFF-----------PTPVEINLLIQSLCREGK 459
           T + ++ GL   GKL +A ++ + M K               P     N+LI  L  EGK
Sbjct: 460 TCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGK 519

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
              A++  +E  ++G   + + + S+I G C++  L+EA  + D M      PD VT+TT
Sbjct: 520 FSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTT 579

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           +I+   K GRV +  E+  +M  +G+V   +TYRT+IH +CQVG +   L + ++M+S 
Sbjct: 580 LINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISS 638



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 242/472 (51%), Gaps = 41/472 (8%)

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           +KL  AL    ++   G  P+++T++ L+ G C   R+ +A+    ++    C P+ +++
Sbjct: 125 SKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAF 180

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            T+M  LC+E R+ E   L+++MV D                       G  P+ +TY  
Sbjct: 181 TTLMNGLCREGRVVEAVALLDRMVED-----------------------GLQPNQITYGT 217

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
           +V+G C++G+   A  +L++M      KPN V Y+A ++GL  +G+  +A+ + +  +E+
Sbjct: 218 IVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEK 277

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
             +PN  TY+ +++G    G+ SEA  ++REM ++   P  V  ++LI +L +EGK   A
Sbjct: 278 GISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEA 337

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           ++   E L +G   N + + S+I GF ++  L+ A  +   M      PD +T++ +ID 
Sbjct: 338 EELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDG 397

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
                RV++  +L+ +M  +GLV   +TY T+IH +CQ+G +   L LL++M+S   C  
Sbjct: 398 YCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPN 457

Query: 584 AY--NQVIENLCSFGYLEEAGKILGKVLRTASKADAS-----------TCHVLVESYLNK 630
               N +++ LC+ G L++A ++   + ++    DAS           T ++L+   +N+
Sbjct: 458 VVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINE 517

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           G    A ++   M +R L+PD      V + L  + + +EA  +      +G
Sbjct: 518 GKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKG 569



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 224/451 (49%), Gaps = 38/451 (8%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            D   AL      +   R + + ++Y  +++ L K      A+ +   M  +GI   P  
Sbjct: 226 GDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGIS--PNL 283

Query: 179 FSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           F+Y  ++  +  +G+   A  +L  M +  ++P+++  +  I+ LV   K  +A      
Sbjct: 284 FTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNE 343

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M   GI PN +TYN +I G+   +R+  A ++   M  KGCSPD +++  ++   C  KR
Sbjct: 344 MLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKR 403

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
           +                       ++  +L+++MS+ G + + +TYT +++GFC++G L+
Sbjct: 404 V-----------------------DDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLN 440

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT---------- 406
            A  +LQ+M   G  PN V+    L+GLC+NGK  +A EM    ++              
Sbjct: 441 AALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDV 500

Query: 407 -PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+  TY++++ GL  EGK SEA ++  EM  +G  P  +  N +I  LC++ ++D A +
Sbjct: 501 EPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQ 560

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
                 +KG + +VV FT+LI G+C+ G + + L +  +M       + +TY T+I    
Sbjct: 561 MFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFC 620

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           + G +  A ++  +M+S G+ P  +T R ++
Sbjct: 621 QVGNINGALDIFQEMISSGVYPDTITIRNML 651



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 184/366 (50%), Gaps = 23/366 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+R+LR M  R +      FS L+ A  + GK   A  + + M    + PN +  N+ I 
Sbjct: 302 AQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMID 361

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                N+L  A R    M   G +P+V+T++ LI GYC   R+ D +KL+ EM  +G   
Sbjct: 362 GFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVA 421

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NLFHD----QGRIEEAKEL- 326
           + ++Y T++   C+   +    DL+++M++          N   D     G++++A E+ 
Sbjct: 422 NTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMF 481

Query: 327 -VNQMSQMG---------CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            V Q S+M            PDV TY  ++ G    G+  +A+++ ++M H G  P+T++
Sbjct: 482 KVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTIT 541

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y + ++GLC   +  EA +M ++   + ++P+ +T++ +++G  + G++ +  +V  EM 
Sbjct: 542 YNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMG 601

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           ++G     +    LI   C+ G ++GA    QE ++ G   + +   +++ G   K +L+
Sbjct: 602 RRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 661

Query: 497 EALSLL 502
            A+  L
Sbjct: 662 RAVQCL 667



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 155/317 (48%), Gaps = 16/317 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
           + I Y  M++  SK      A+R+  LMA +G  C P+   FS L+  Y  A ++ + M 
Sbjct: 352 NTITYNSMIDGFSKQNRLDAAERMFYLMATKG--CSPDVITFSILIDGYCGAKRVDDGMK 409

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M +  +  N +   T IH       L  AL  L+ M  +G+ PNV+T N L+ G C
Sbjct: 410 LLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLC 469

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
           +  ++KDA+++   M       D    +  +     E  ++    L+  ++N       +
Sbjct: 470 NNGKLKDALEMFKVMQKSKMDLDASHPFNDV-----EPDVQTYNILICGLIN-------E 517

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G+  EA+EL  +M   G +PD +TY +V++G C+   LD+A +M   M   G  P+ V++
Sbjct: 518 GKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTF 577

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T  +NG C  G+  +  E+           NAITY  ++HG  + G ++ A D+ +EM+ 
Sbjct: 578 TTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMIS 637

Query: 438 KGFFPTPVEINLLIQSL 454
            G +P  + I  ++  L
Sbjct: 638 SGVYPDTITIRNMLTGL 654



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
              +LI+  C   K+  A     +    G   ++V F++L+ G C +  + EAL      
Sbjct: 113 SFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ- 171

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
            +CK  P+ + +TT+++ L + GRV EA  L+ +M+  GL P  +TY T++   C++G  
Sbjct: 172 -ICK--PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 228

Query: 566 EDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
              L LL KM    + +     Y+ +I+ L   G   +A  +  ++       +  T + 
Sbjct: 229 VSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNC 288

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++  + + G    A ++   MF R + PD+     +   L+ EGK  EA+ L    + RG
Sbjct: 289 MINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRG 348

Query: 683 HI 684
            I
Sbjct: 349 II 350


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/562 (26%), Positives = 260/562 (46%), Gaps = 62/562 (11%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSM 201
           Y ++L+ L      Q A  +L++M   G +C P+  SY  V   + + G L  A      
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + PN++  ++ I  L     + KA+  L  M   G+ PN  TYN ++ GYC   +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            K+AI  + +M   G  PD V+Y ++M YLCK                        GR  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK-----------------------NGRCT 321

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA+++ + M++ G  P++ TY  ++ G+   G L +   +L  M  +G  PN   ++  +
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
                 GK  +A  + +   ++   P+ +TY  V+  L + G++ +A     +M+ +   
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  +  N LI SLC   K D AK+ + E L++G  ++ + F S+I   C++G + E+  L
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKL 501

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            D M      PD +TY+T+ID     G+++EAT+L+  M+S G+ P  VTY T+I+ YC+
Sbjct: 502 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK 561

Query: 562 VGRVEDLLKLLEKMLSK-----------------QKCRTA-------------------- 584
           + R+ED L L  +M S                  Q  RTA                    
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN ++  LC     +EA ++   +  T  + +  T ++++ + L  G    A  +   + 
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 645 NRNLIPDLKLCKKVSERLILEG 666
              L+PD++    ++E LI +G
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQG 703



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 242/482 (50%), Gaps = 22/482 (4%)

Query: 167 MARRGI-ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           MAR G  E  P   +Y  L+ +   AG+L      L  + K     + +     +  L  
Sbjct: 79  MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138

Query: 224 GNKLAKALRF-LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG--CSPD 280
             + + A+   L RM   G  PNV +YN L+KG CD +R ++A++L+  MP  G  C PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 281 KVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSNLFH---DQGRIEEAKELVN 328
            VSY TV+    KE  + +          R ++  +V  S++         +++A E++ 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            M + G +P+  TY ++V+G+C  G+  +A   L++M+  G +P+ V+Y + ++ LC NG
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EAR+M ++  +    P   TY  ++ G   +G L E   ++  MV+ G  P     +
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           +LI +  ++GK+D A     +   +G   + V + ++I   C+ G +E+A+   + M   
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV--- 565
           +  P  + Y ++I +L    + ++A EL+++ML +G+    + + ++I  +C+ GRV   
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 566 EDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           E L  L+ ++  K    T Y+ +I+  C  G ++EA K+L  ++    K D  T + L+ 
Sbjct: 499 EKLFDLMVRIGVKPDIIT-YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 626 SY 627
            Y
Sbjct: 558 GY 559



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/534 (22%), Positives = 243/534 (45%), Gaps = 51/534 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K +    A  VL  M + G+      ++ ++  Y  +G+ + A+  L  
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC---- 257
           M    V P+++  N+ +  L    +  +A +  + M   G+ P + TY  L++GY     
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 258 --DLH-----------------------------RIKDAIKLIDEMPLKGCSPDKVSYYT 286
             ++H                             ++  A+ +  +M  +G +PD V+Y T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQ---GRIEEAKELVNQMSQMG 334
           V+G LCK  R+++     E+M+++         ++L H      + ++AKEL+ +M   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
              D + + ++++  C+ G + +++K+   M   G KP+ ++Y+  ++G C  GK  EA 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +++ +       P+ +TY+ +++G  +  ++ +A  + REM   G  P  +  N+++Q L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            +  +   AK+        G  + +  +  ++ G C+    +EAL +  ++ L     +T
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            T+  +I AL K GR +EA +L   + + GLVP V TY  +     + G +E+L  L   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 575 MLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           M  +  C       N ++  L   G +  AG  L  +       +AST  + ++
Sbjct: 715 M-EENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/562 (26%), Positives = 260/562 (46%), Gaps = 62/562 (11%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSM 201
           Y ++L+ L      Q A  +L++M   G +C P+  SY  V   + + G L  A      
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + PN++  ++ I  L     + KA+  L  M   G+ PN  TYN ++ GYC   +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            K+AI  + +M   G  PD V+Y ++M YLCK                        GR  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK-----------------------NGRCT 321

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA+++ + M++ G  P++ TY  ++ G+   G L +   +L  M  +G  PN   ++  +
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
                 GK  +A  + +   ++   P+ +TY  V+  L + G++ +A     +M+ +   
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  +  N LI SLC   K D AK+ + E L++G  ++ + F S+I   C++G + E+  L
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKL 501

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            D M      PD +TY+T+ID     G+++EAT+L+  M+S G+ P  VTY T+I+ YC+
Sbjct: 502 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK 561

Query: 562 VGRVEDLLKLLEKMLSK-----------------QKCRTA-------------------- 584
           + R+ED L L  +M S                  Q  RTA                    
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN ++  LC     +EA ++   +  T  + +  T ++++ + L  G    A  +   + 
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 645 NRNLIPDLKLCKKVSERLILEG 666
              L+PD++    ++E LI +G
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQG 703



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 242/482 (50%), Gaps = 22/482 (4%)

Query: 167 MARRGI-ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           MAR G  E  P   +Y  L+ +   AG+L      L  + K     + +     +  L  
Sbjct: 79  MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138

Query: 224 GNKLAKALRF-LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG--CSPD 280
             + + A+   L RM   G  PNV +YN L+KG CD +R ++A++L+  MP  G  C PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 281 KVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSNLFH---DQGRIEEAKELVN 328
            VSY TV+    KE  + +          R ++  +V  S++         +++A E++ 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            M + G +P+  TY ++V+G+C  G+  +A   L++M+  G +P+ V+Y + ++ LC NG
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EAR+M ++  +    P   TY  ++ G   +G L E   ++  MV+ G  P     +
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           +LI +  ++GK+D A     +   +G   + V + ++I   C+ G +E+A+   + M   
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV--- 565
           +  P  + Y ++I +L    + ++A EL+++ML +G+    + + ++I  +C+ GRV   
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 566 EDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           E L  L+ ++  K    T Y+ +I+  C  G ++EA K+L  ++    K D  T + L+ 
Sbjct: 499 EKLFDLMVRIGVKPDIIT-YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 626 SY 627
            Y
Sbjct: 558 GY 559



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/534 (22%), Positives = 243/534 (45%), Gaps = 51/534 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K +    A  VL  M + G+      ++ ++  Y  +G+ + A+  L  
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC---- 257
           M    V P+++  N+ +  L    +  +A +  + M   G+ P + TY  L++GY     
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 258 --DLH-----------------------------RIKDAIKLIDEMPLKGCSPDKVSYYT 286
             ++H                             ++  A+ +  +M  +G +PD V+Y T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQ---GRIEEAKELVNQMSQMG 334
           V+G LCK  R+++     E+M+++         ++L H      + ++AKEL+ +M   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
              D + + ++++  C+ G + +++K+   M   G KP+ ++Y+  ++G C  GK  EA 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +++ +       P+ +TY+ +++G  +  ++ +A  + REM   G  P  +  N+++Q L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            +  +   AK+        G  + +  +  ++ G C+    +EAL +  ++ L     +T
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            T+  +I AL K GR +EA +L   + + GLVP V TY  +     + G +E+L  L   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 575 MLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           M  +  C       N ++  L   G +  AG  L  +       +AST  + ++
Sbjct: 715 M-EENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/563 (26%), Positives = 265/563 (47%), Gaps = 21/563 (3%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRL-MARRG 171
           A + +Q      L+FF+      R   D   Y ++L+ L +      A  + R  MAR G
Sbjct: 21  ATINTQRVNLCPLKFFFVRSSS-RSVAD---YNIVLQSLCRAGETARALEIFRGEMARDG 76

Query: 172 IECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           +      ++ ++    ++ +L   M +   + K    P+++  NT I  L     L +A 
Sbjct: 77  VAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEAR 136

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS--PDKVSYYTVMG 289
           R    M   G  PNV+TY+ LI G C + RI +A +LI EM  K C   P+ ++Y + + 
Sbjct: 137 RLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD 196

Query: 290 YLCKEKRIKEVRDLMEKM-----------VNDSNLFHDQGRIEEAKELVNQ-MSQMGCIP 337
            LCK+    E  +LM  +           V  S L     +  +  E  N  M   G +P
Sbjct: 197 GLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVP 256

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           +VVTY A+VNG C+  ++++A  M++ M   G  P+ ++Y+  ++  C   +  EA E++
Sbjct: 257 NVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 316

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +       TPN +T++ ++ GL +  +  EA  +  ++  +   P  V  N+LI   C+ 
Sbjct: 317 HGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKA 376

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G  + A    +E + K    +V+ F +LI G C+ G +E A  +LD M      P+ VTY
Sbjct: 377 GNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 436

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
             ++  L K+GR+EE  E + +M+S G VP  +TY ++++  C+  R +D L+L+ K+ S
Sbjct: 437 NVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKS 496

Query: 578 --KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
                    YN +++ L   G  E+A  +L +++    + D+ T           G    
Sbjct: 497 FGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAG 556

Query: 636 AYKVACRMFNRNLIPDLKLCKKV 658
             ++   +  + ++PD   C  +
Sbjct: 557 TMELLRVVLAKGMLPDATTCSSI 579



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 253/516 (49%), Gaps = 68/516 (13%)

Query: 215 NTAIHVLVVGNKLAKALR-FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           N  +  L    + A+AL  F   M   G+ P ++TYN +I G C  + +   ++L +E+ 
Sbjct: 49  NIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 108

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQM 333
            +G  PD V+Y T++  LCK                        G +EEA+ L   MS  
Sbjct: 109 KRGHHPDVVTYNTLIDSLCK-----------------------AGDLEEARRLHGGMSSR 145

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK--PNTVSYTAFLNGLCHNGKSL 391
           GC+P+VVTY+ ++NG C+VG +D+A++++Q+M    C   PN ++Y +FL+GLC    + 
Sbjct: 146 GCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTA 205

Query: 392 EAREMINTSEEEWW--TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
           EA E++ +  +     +P+ +T+S ++ GL + G+  EAC+   +M+  G+ P  V  N 
Sbjct: 206 EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNA 263

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L+  LC+  KM+ A   ++  ++KG   +V+ ++ L+  FC+   ++EAL LL  M    
Sbjct: 264 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 323

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P+ VT+ +IID L K+ R  EA ++ +++ ++ LVP  VT+  +I   C+ G  E   
Sbjct: 324 CTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQAS 383

Query: 570 KLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            L E+M++K  Q     +  +I+ LC  G +E A  IL  +       +  T +VLV   
Sbjct: 384 ALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGL 443

Query: 628 LNKG-----------------IP------LLAY------------KVACRMFNRNLIPDL 652
              G                 +P       L Y            ++  ++ +    PD 
Sbjct: 444 CKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDT 503

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
                + + L   GK+E+A T++   V +GH QP S
Sbjct: 504 VTYNILVDGLWKSGKTEQAITVLEEMVGKGH-QPDS 538



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 209/417 (50%), Gaps = 27/417 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRNAMYVL 199
           I Y   L+ L K  +   A  ++R +    +   P+   FS L+    + G+   A    
Sbjct: 189 ITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN-- 246

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M      PN++  N  ++ L   +K+ +A   +E M   G+TP+V+TY+ L+  +C  
Sbjct: 247 DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 306

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R+ +A++L+  M  +GC+P+ V++ +++  LCK  R  E                    
Sbjct: 307 SRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEA------------------- 347

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            + A ++ N+M     +PD VT+  ++ G C+ G  +QA  + ++M     +P+ +++ A
Sbjct: 348 FQIALQVYNRM----LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGA 403

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++GLC  G+   AR++++        PN +TY+V++HGL + G++ E C+ + EMV  G
Sbjct: 404 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG 463

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  +    L+ +LCR  + D A + + +  + G   + V +  L+ G  + G  E+A+
Sbjct: 464 CVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAI 523

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           ++L++M      PD+ T+      L ++G +    EL+  +L+KG++P   T  +++
Sbjct: 524 TVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 180/361 (49%), Gaps = 22/361 (6%)

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQ-QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           V  Y  V+   CR GE  +A ++ + +M   G  P  V+Y   +NGLC + +     E+ 
Sbjct: 45  VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
               +    P+ +TY+ ++  L + G L EA  +   M  +G  P  V  ++LI  LC+ 
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164

Query: 458 GKMDGAKKFMQECLNKGCAV--NVVNFTSLIRGFCQKGDLEEALSL---LDDMYLCKKDP 512
           G++D A++ +QE   K C V  N++ + S + G C++    EA  L   L D  L +  P
Sbjct: 165 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL-RVSP 223

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           DTVT++T+ID L K G+ +EA      M++ G VP VVTY  +++  C+  ++E    ++
Sbjct: 224 DTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMI 281

Query: 573 EKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           E M+ K        Y+ +++  C    ++EA ++L  +       +  T + +++     
Sbjct: 282 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 341

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS-----EEADTLMLRFVERGHIQ 685
                A+++A +++NR L+PD     KV+  +++ G       E+A  L    V + ++Q
Sbjct: 342 DRSGEAFQIALQVYNRMLVPD-----KVTFNILIAGACKAGNFEQASALFEEMVAK-NMQ 395

Query: 686 P 686
           P
Sbjct: 396 P 396



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 12/216 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+    +AG    A  +   M    + P+++     I  L    ++  A   L+ M 
Sbjct: 366 FNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMG 425

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G+ PNV+TYN L+ G C   RI++  + ++EM   GC P+ ++Y +++  LC+  R  
Sbjct: 426 NLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTD 485

Query: 299 EVRDLMEKMVN--------DSNLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           +   L+ K+ +          N+  D     G+ E+A  ++ +M   G  PD  T+ A  
Sbjct: 486 DALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACF 545

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
            G  R G L    ++L+ +   G  P+  + ++ L+
Sbjct: 546 GGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 276/565 (48%), Gaps = 20/565 (3%)

Query: 105 SLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           +L P+ + AV++ Q +   AL+ F    ++  ++H  + Y  M+E L      +  + VL
Sbjct: 4   ALLPKHVAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVL 63

Query: 165 ---RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
              R+    G+      +   M  Y R GK++ A+ V   M      P++   N  +++L
Sbjct: 64  AETRMNIDNGL--LEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNIL 121

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
           V      +A +   RM+  GI P+V T+   +K +C   R   A +L++ MP +GC    
Sbjct: 122 VEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSA 181

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVN---------DSNLFHD---QGRIEEAKELVNQ 329
           V+Y TV+G   +E    E  +L E+M+           + L H    +G ++E++ L+N+
Sbjct: 182 VAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNK 241

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           + + G  P++ T    + GFC+   L++A ++L  +   G  P+ ++Y   + GLC N K
Sbjct: 242 VLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNFK 300

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
            +EA   +     E + P+  TY+ ++ G  + G +  A  ++R+   KGF P       
Sbjct: 301 VVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCS 360

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI  LC++G +D A     E + KG   N+V   +L++G  Q+G + +AL L+++M    
Sbjct: 361 LINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENG 420

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             PD  TY  +I+ L K G V +A  L++  ++KG +P V T+ T+I  YC+  ++++ +
Sbjct: 421 CSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAI 480

Query: 570 KLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           +++++M +         YN ++  LC  G  E+       ++      +  T ++L ES+
Sbjct: 481 EIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESF 540

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDL 652
                   A  +   M N+ L PD+
Sbjct: 541 CKARKVEEALNLIEEMQNKGLTPDV 565



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/571 (25%), Positives = 274/571 (47%), Gaps = 33/571 (5%)

Query: 123 VALQFFYWADRQWRYRHD----PIVYYMMLEILS--KTKLCQGAKRVLRLMARRGIECRP 176
           V  ++F  A + +    D    P VY   + + S  +T     A+R+L  M  +G E   
Sbjct: 122 VEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSA 181

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
            A+  ++  +        A  +   M    + P+++  N  IH L     + ++ R L +
Sbjct: 182 VAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNK 241

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           +   G++PN+ T N  I+G+C    + +AI+L+D +  +G +PD ++Y T++  LCK  +
Sbjct: 242 VLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG-RGLTPDVITYNTLICGLCKNFK 300

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
           + E    + KMVN+                       G  PD  TY ++++G+C++G + 
Sbjct: 301 VVEAEHYLRKMVNE-----------------------GYEPDGFTYNSIIDGYCKLGMMQ 337

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
            A ++L+     G  P+  +Y + +NGLC +G    A  + N + E+   PN +  + ++
Sbjct: 338 NADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLV 397

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            GL ++G + +A  ++ EM + G  P     NL+I  LC+ G +  A   + + + KG  
Sbjct: 398 KGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHL 457

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            +V  F +LI G+C+K  L+ A+ ++D M+     PD +TY +I++ L K G+ E+    
Sbjct: 458 PDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGT 517

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN--QVIENLCS 594
              M+ KG VP ++TY  +   +C+  +VE+ L L+E+M +K       N   +++  C 
Sbjct: 518 FKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCD 577

Query: 595 FGYLEEAGKILGKVLRTASKADA-STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
            G L+ A ++  +V      +   +T ++++ ++  K    +A K+  +M      PD  
Sbjct: 578 NGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSY 637

Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERGHI 684
             + + +     G      + +L  +E+G I
Sbjct: 638 TYRVMIDGFCKTGNINSGYSFLLVKIEKGLI 668



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 136/549 (24%), Positives = 258/549 (46%), Gaps = 71/549 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  ++  L +    Q ++R+L  + +RG+       +  +  + +   L  A+ +L
Sbjct: 215 DIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLL 274

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + +  + P+++  NT I  L    K+ +A  +L +M   G  P+  TYN +I GYC L
Sbjct: 275 DGVGRG-LTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKL 333

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE----KRIKEVRDLMEKMVNDSNLF- 314
             +++A +++ +   KG  PD+ +Y +++  LC++    + I    + MEK +  + +  
Sbjct: 334 GMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLC 393

Query: 315 -------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    QG I +A +L+N+MS+ GC PD+ TY  V+NG C++G +  A  ++     
Sbjct: 394 NTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIA 453

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+  ++   ++G C   K   A E+++       +P+ ITY+ +++GL + GK  +
Sbjct: 454 KGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYED 513

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
                + M++KG  P  +  N+L +S C+  K++ A   ++E  NKG   +VVNF +L++
Sbjct: 514 VMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMK 573

Query: 488 GFCQKGDLEEALSL---LDDMY-------------------------------LCKK--D 511
           GFC  GDL+ A  L   +D+ Y                               +C+    
Sbjct: 574 GFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFS 633

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD+ TY  +ID   K G +      ++  + KGL+P++ T+  V++  C   RV + + +
Sbjct: 634 PDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGI 693

Query: 572 LEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +  M+ K       N + E                     A K + +   ++VE+ + KG
Sbjct: 694 IHLMVHKGIVPEVVNTIFE---------------------ADKKEVAAPKIVVENLMKKG 732

Query: 632 -IPLLAYKV 639
            I   AY++
Sbjct: 733 HITYFAYEI 741



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 181/370 (48%), Gaps = 3/370 (0%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G+I+EA ++  +M    C P V +Y A++N        DQA K+  +M   G  P+  +
Sbjct: 89  KGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYT 148

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           +T  +   C   +   AR ++N    +    +A+ Y  V+ G   E    EA ++  EM+
Sbjct: 149 FTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEML 208

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
             G  P  +  N LI +LCR+G +  +++ + + L +G + N+      I+GFCQ+  L 
Sbjct: 209 GLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLN 268

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           EA+ LLD +      PD +TY T+I  L KN +V EA   + KM+++G  P   TY ++I
Sbjct: 269 EAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSII 327

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
             YC++G +++  ++L     K      + Y  +I  LC  G ++ A  +  + +    K
Sbjct: 328 DGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLK 387

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            +   C+ LV+    +G+ L A K+   M      PD+     V   L   G   +AD L
Sbjct: 388 PNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNL 447

Query: 675 MLRFVERGHI 684
           ++  + +GH+
Sbjct: 448 VIDAIAKGHL 457



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 191/420 (45%), Gaps = 32/420 (7%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y  D   Y  +++   K  + Q A ++LR  A +G       +  L+    + G +  A+
Sbjct: 316 YEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAI 375

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            V +   +  + PNL++CNT +  L     + +AL+ +  M   G +P++ TYN +I G 
Sbjct: 376 NVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGL 435

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C +  + DA  L+ +   KG  PD  ++ T++   CK+                      
Sbjct: 436 CKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKL--------------------- 474

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
             +++ A E+V++M   G  PDV+TY +++NG C+ G+ +      + M   GC PN ++
Sbjct: 475 --KLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIIT 532

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y       C   K  EA  +I   + +  TP+ + +  +M G    G L  A  + + + 
Sbjct: 533 YNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVD 592

Query: 437 KK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           ++  F  T    N++I +   +  M+ A+K   +    G + +   +  +I GFC+ G++
Sbjct: 593 EQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNI 652

Query: 496 EEALSLLDDMYLCKKD----PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
               S L    L K +    P   T+  +++ L    RV EA  ++  M+ KG+VP VV 
Sbjct: 653 NSGYSFL----LVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVN 708


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 242/457 (52%), Gaps = 22/457 (4%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +    PN +  N  ++      +     R LE M    I PNV++YN L++G C L R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 262 IKDAIKLIDEMPLKG--CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
             +A +L+ +M  +G   +PD V+Y T++   CK  +++E R+L++++++     D+ ++
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 315 HD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                      R+ EA EL+ +M + GC P ++T+  +++G CR   L+ A  +LQ+M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G K + V+Y   ++GLC  G+  EA +++   +     P+ + YS  ++GL + GK+ +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK-GCAVNVVNFTSLI 486
           A  V+ +M      P  V  N ++  LC+ GK+D A + M++  +  GC +NVV +++++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C+ G  +EA S+++ M      PD VTY+++++ L K G++EEA E + +M  +G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR-------TAYNQVIENLCSFGYLE 599
           P  VTY +++H  C  GR+ +  +++E+M S            + YN +I  LC  G ++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
           +A K   ++       D  +   +VE     G  L A
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 214/409 (52%), Gaps = 33/409 (8%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAG 190
           R  R   D + Y  +L    K    + ++ +L+ +  RG+  RP+A  Y  V  S  ++ 
Sbjct: 74  RGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGL--RPDALMYTKVVASLCKSA 131

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L  A+ +L  M +A   P L+  NT I        L  A   L++M  +G+  +V+TYN
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYN 191

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            L+ G C   R+++A +L++ M   GC+PD V+Y + +  LCK  ++ +   ++E+M  D
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM-RD 250

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH-G 369
           S+  HD                    P+VVTY  +++G C+ G++D A +M++QM    G
Sbjct: 251 SH--HD--------------------PNVVTYNTILDGLCKSGKIDTALEMMEQMASSDG 288

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
           C  N V Y+  ++GLC  G++ EAR ++         P+ +TYS +++GL + GK+ EA 
Sbjct: 289 CGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAV 348

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE-----CLNKGCAVNVVNFTS 484
           + VREM  +G  P  V    L+  LC  G++  A++ ++E          C  +V  + +
Sbjct: 349 EAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNA 408

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           LI G C+ G +++AL     M     DPD V+Y+TI++ L+++GR  +A
Sbjct: 409 LIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 152/315 (48%), Gaps = 42/315 (13%)

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   GC PN+V++ A +NG    G+  +   ++ T       PN ++Y+ ++ GL +  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             EA ++VR+M+ +G   TP                                 ++V +++
Sbjct: 61  WHEAEELVRDMISRGGRSTP---------------------------------DMVTYST 87

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L+ G+C+ G +EE+  LL ++      PD + YT ++ +L K+ R+ EA EL+ +M+  G
Sbjct: 88  LLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAG 147

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAG 602
             PT++T+ T+I   C+   +E    LL+KM +   +     YN +++ LC  G L+EA 
Sbjct: 148 CCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAE 207

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           ++L ++  +    D       V      G  L A++V  +M + +  P++     V+   
Sbjct: 208 QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNV-----VTYNT 262

Query: 663 ILEG--KSEEADTLM 675
           IL+G  KS + DT +
Sbjct: 263 ILDGLCKSGKIDTAL 277


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 222/438 (50%), Gaps = 19/438 (4%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLA---GITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
           N+ ++V++      +AL F   +  A    I+PNVLT+N +IK  C +  + DA+++  +
Sbjct: 135 NSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRD 194

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGR 319
           MP+  C PD  +Y T+M  LCK  RI E   L+++M  D             N    +G 
Sbjct: 195 MPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGD 254

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +    +LV+ M   GC P+ VTY  +++G C  G+L++A  +L +M    C PN V+Y  
Sbjct: 255 LARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGT 314

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +NGL   G++L+   ++   EE  +  N   YS ++ GL +EGK  EA  + +EM  K 
Sbjct: 315 IINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKE 374

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
                +  + +I  LCR+GK D A + + E  N  C  N   ++SL++GF + G+  +A+
Sbjct: 375 CELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAI 434

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +  DM       + V Y+ +I  L K+G+V+EA  +  +ML KG  P VV Y ++I+  
Sbjct: 435 EMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGL 494

Query: 560 CQVGRVEDLLKLLEKMLSK----QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
              G VED L+L  +ML +    Q     YN ++  LC    +  A  +L  +L      
Sbjct: 495 SNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDP 554

Query: 616 DASTCHVLVESYLNKGIP 633
           D  TC + + +   K  P
Sbjct: 555 DLVTCIIFLRTLREKLDP 572



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 225/478 (47%), Gaps = 71/478 (14%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + + ++++ + K  L   A ++ R M     +C+P+ ++Y  LM    +A ++  A+ +L
Sbjct: 170 LTFNLVIKTMCKVGLVDDAVQMFRDMPVS--KCQPDVYTYCTLMDGLCKADRIDEAVSLL 227

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             MQ     P+ +  N  I+ L     LA+  + ++ M L G  PN +TYN LI G C  
Sbjct: 228 DEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLK 287

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEK---MVND--- 310
            +++ AI L+D M    C P+ V+Y T++  L K+ R  +   V  LME+    VN+   
Sbjct: 288 GKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVY 347

Query: 311 ----SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
               S LF  +G+ +EA +L  +M+   C  + + Y+AV++G CR G+ D+A ++L +M 
Sbjct: 348 SALISGLFK-EGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMT 406

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
           ++ CKPN  +Y++ + G    G   +A EM     +  +T N + YSV++HGL ++GK+ 
Sbjct: 407 NNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 466

Query: 427 EACDVVREMVKKG-------------------------------------FFPTPVEINL 449
           EA  V  +M+ KG                                       P  V  N+
Sbjct: 467 EAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNI 526

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD-LEEALSLLDDMYLC 508
           L+ +LC++  +  A   +   L++GC  ++V     +R   +K D  ++    LD + + 
Sbjct: 527 LLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVV- 585

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                          L K  RV  A++++  ML K L P   T+  V+   C   +V+
Sbjct: 586 --------------RLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQ 629



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 180/373 (48%), Gaps = 16/373 (4%)

Query: 321 EEAKELVNQMS-QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH--GCK-----P 372
           E+A  L ++M+ +  C   V ++ +V+N   + G   +A     + Y+H  G K     P
Sbjct: 112 EKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRA----LEFYNHVIGAKGVNISP 167

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N +++   +  +C  G   +A +M          P+  TY  +M GL +  ++ EA  ++
Sbjct: 168 NVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLL 227

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            EM   G FP+PV  N+LI  LC++G +    K +     KGCA N V + +LI G C K
Sbjct: 228 DEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLK 287

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G LE+A+SLLD M   K  P+ VTY TII+ L K GR  +   ++  M  +G       Y
Sbjct: 288 GKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVY 347

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVL 609
             +I    + G+ ++ ++L ++M  K+ C      Y+ VI+ LC  G  +EA ++L ++ 
Sbjct: 348 SALISGLFKEGKSQEAMQLFKEMTVKE-CELNTIVYSAVIDGLCRDGKPDEALEVLSEMT 406

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
               K +A T   L++ +   G    A ++   M   N   +      +   L  +GK +
Sbjct: 407 NNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 466

Query: 670 EADTLMLRFVERG 682
           EA  +  + + +G
Sbjct: 467 EAMMVWAQMLGKG 479



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/436 (22%), Positives = 172/436 (39%), Gaps = 108/436 (24%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  +++ L K      A  +L  M   G    P  F+ L+    + G L     ++
Sbjct: 203 DVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLV 262

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M     APN +  NT IH L +  KL KA+  L+RM  +   PNV+TY  +I G    
Sbjct: 263 DNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQ 322

Query: 260 HRIKD-----------------------------------AIKLIDEMPLKGCSPDKVSY 284
            R  D                                   A++L  EM +K C  + + Y
Sbjct: 323 GRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVY 382

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVND---------SNL---FHDQGRIEEAKELVNQMSQ 332
             V+  LC++ +  E  +++ +M N+         S+L   F + G   +A E+   M++
Sbjct: 383 SAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAK 442

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
                + V Y+ +++G C+ G++ +A  +  QM   GCKP+ V+Y + +NGL + G   +
Sbjct: 443 HNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVED 502

Query: 393 AREMINT--SEEEWWTPNAITYSVVMHGLRREGKLSEA-----------CD--------- 430
           A ++ N    +E    P+ +TY+++++ L ++  +S A           CD         
Sbjct: 503 ALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIF 562

Query: 431 ------------------------------------VVREMVKKGFFPTPVEINLLIQSL 454
                                               +V  M++K   P P     +++ L
Sbjct: 563 LRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDL 622

Query: 455 CREGKMDGAKKFMQEC 470
           C   K+  A   +Q+C
Sbjct: 623 CNPKKVQAA---IQKC 635



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 36/240 (15%)

Query: 447 INLLIQSLCREGKMDGAKKFMQECLN-KGCAV--NVVNFTSLIRGFCQKGDLEEALSLLD 503
            N ++  + +EG    A +F    +  KG  +  NV+ F  +I+  C+ G +++A+ +  
Sbjct: 134 FNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFR 193

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           DM + K  PD  TY T++D L K  R++EA  L+ +M   G  P+ VT+           
Sbjct: 194 DMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTF----------- 242

Query: 564 RVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
                                 N +I  LC  G L    K++  +       +  T + L
Sbjct: 243 ----------------------NVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTL 280

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +     KG    A  +  RM +   +P++     +   L+ +G++ +   ++    ERG+
Sbjct: 281 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGY 340


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 160/570 (28%), Positives = 278/570 (48%), Gaps = 30/570 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y ++++   K K  + AK +   M   G+   P  F+Y  L+  + + G +  A+ 
Sbjct: 310 DGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGL--NPNRFTYTALIDGFIKEGNIEEALR 367

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M    +  N++  N  I  +    ++AKA+     M +AG+ P+  TYN LI GY 
Sbjct: 368 IKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYL 427

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLF 314
             H +  A +L+ EM  +  +P   +Y  ++  LC    +++  +++++M+ +    N+F
Sbjct: 428 KSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVF 487

Query: 315 H---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                      + R E A EL+  M   G +PD+  Y  ++ G CR  ++++AK +L  M
Sbjct: 488 MYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM 547

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G KPN  +Y AF+N    +G+   A             PN + Y++++ G    G  
Sbjct: 548 GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNT 607

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA    + M++KG  P     + +I SL + GK   A     + L  G   +V  + SL
Sbjct: 608 VEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I GFC++GD+E+A  L D+M     +P+ V Y T+I+ L K G V +A EL  ++  K L
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDL 727

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQ--VIENLCSFGYLEEAGK 603
           VP VVTY T+I  YC+ G + +  KL ++M+SK      Y    +I+     G LE+A  
Sbjct: 728 VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALS 787

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           +  +  +  S    S  + L++S+   G  + A ++   M ++ L P++     V+  ++
Sbjct: 788 LFHEA-QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNI-----VTYTIL 841

Query: 664 LE--GKS---EEADTLMLRFVERGHIQPKS 688
           ++  GK+   EEA+ L L  +E  +I P +
Sbjct: 842 IDAYGKAEMMEEAEQLFLD-METRNIIPNT 870



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 237/486 (48%), Gaps = 35/486 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +L++M   G+   P+ F Y  L++   RA K+  A  +L  M +  + PN       
Sbjct: 505 AIELLKIMIANGV--LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAF 562

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I++     ++  A R+ + M  +GI PN + Y  LIKG+CD+    +A+     M  KG 
Sbjct: 563 INLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGL 622

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
            PD  +Y  ++  L K  + KE   +  K +                       + G +P
Sbjct: 623 IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL-----------------------KTGVVP 659

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           DV  Y ++++GFC+ G++++A ++  +M H+G  PN V Y   +NGLC  G+  +ARE+ 
Sbjct: 660 DVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELF 719

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +  EE+   P+ +TYS ++ G  + G L+EA  +  EM+ KG  P      +LI    +E
Sbjct: 720 DEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKE 779

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G ++ A     E   K    ++  F SLI  FC+ G + EA  L DDM   K  P+ VTY
Sbjct: 780 GNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTY 838

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           T +IDA  K   +EEA +L + M ++ ++P  +TY +++  Y Q+G    ++ L + M +
Sbjct: 839 TILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEA 898

Query: 578 KQ-KCRT-AYNQVIENLCSFGYLEEAGKILGKVLRTASKA-----DASTCHVLVESYLNK 630
           +   C   AY  +    C  G   EA K+L K L    K      DA   H+  E  ++ 
Sbjct: 899 RGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQIST 958

Query: 631 GIPLLA 636
            + LL+
Sbjct: 959 VLELLS 964



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 168/646 (26%), Positives = 280/646 (43%), Gaps = 46/646 (7%)

Query: 78  VREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVL-RSQADERVALQ-FFYWADRQW 135
           VRE   +++ R  W   L  E  + +R L P  +C+VL +S+ D+ V LQ FFYW+  + 
Sbjct: 58  VREFSMILK-RKDWQILLNNE--DNVRKLNPEIVCSVLQKSEIDDSVRLQNFFYWSSSKM 114

Query: 136 ---RYRHDPIVYYMMLEI-LSKTKLCQGAKRVL-RLMARRG---------IECRPE---- 177
              +Y H     Y +L I L  + L   A  +L +L+  R          + C  E    
Sbjct: 115 STPQYLHS----YSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGS 170

Query: 178 ---AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
               F   +  +   G L  A  V          P L+ CN  +  L+  N +    +  
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
             M  A I P+V TY  +IK +C +  +     ++ EM  K C P+  +Y   +G LC+ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQT 289

Query: 295 KRIKEVRD----LMEKMVNDS--------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
             + E  +    +MEK +           + F  Q R +EAK +   M   G  P+  TY
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           TA+++GF + G +++A ++  +M   G K N V+Y A + G+   G+  +A  + N    
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               P+  TY++++ G  +   +++AC+++ EM  +   P+P   ++LI  LC    +  
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A + + + +  G   NV  + +LI+ + Q+   E A+ LL  M      PD   Y  +I 
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC- 581
            L +  +VEEA  L++ M  KG+ P   TY   I+ Y + G ++   +  + MLS     
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589

Query: 582 -RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               Y  +I+  C  G   EA      +L      D      ++ S    G    A  V 
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
            +     ++PD+ L   +      EG  E+A  L    +  G I P
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG-INP 694



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 135/527 (25%), Positives = 236/527 (44%), Gaps = 52/527 (9%)

Query: 176 PEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+ ++Y  V  A+ + G +     VLS M+K    PNL   N  I  L     + +AL  
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGLCQTGAVDEALEV 298

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
            + M   G+ P+  TY  L+ G+C   R K+A  + + MP  G +P++ +Y  ++    K
Sbjct: 299 KKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIK 358

Query: 294 EKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
           E  I+E   + ++M+                     G + +A  L N+M   G  PD  T
Sbjct: 359 EGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWT 418

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y  +++G+ +  ++ +A ++L +M      P+  +Y+  ++GLCH+    +A E+++   
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMI 478

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                PN   Y  ++    +E +   A ++++ M+  G  P     N LI  LCR  K++
Sbjct: 479 RNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538

Query: 462 GAK-----------------------------------KFMQECLNKGCAVNVVNFTSLI 486
            AK                                   ++ ++ L+ G   N V +T LI
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILI 598

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           +G C  G+  EALS    M      PD   Y+ II +LSKNG+ +EA  + +K L  G+V
Sbjct: 599 KGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV 658

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKI 604
           P V  Y ++I  +C+ G +E   +L ++ML          YN +I  LC  G + +A ++
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAREL 718

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
             ++       D  T   +++ Y   G    A+K+   M ++ + PD
Sbjct: 719 FDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPD 765



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 190/404 (47%), Gaps = 13/404 (3%)

Query: 160  AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
            A    + M  +G+     A+S ++ + S+ GK + AM V     K  V P++ + N+ I 
Sbjct: 610  ALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLIS 669

Query: 220  VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                   + KA +  + M   GI PN++ YN LI G C L  +  A +L DE+  K   P
Sbjct: 670  GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVP 729

Query: 280  DKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF-------HDQGRIEEAKELV 327
            D V+Y T++   CK   + E   L ++M++     D  ++         +G +E+A  L 
Sbjct: 730  DVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF 789

Query: 328  NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            ++ +Q   +  +  + ++++ FC+ G++ +A+++   M      PN V+YT  ++     
Sbjct: 790  HE-AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKA 848

Query: 388  GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
                EA ++    E     PN +TY+ ++    + G   +   + ++M  +G     +  
Sbjct: 849  EMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAY 908

Query: 448  NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             ++  + C+EGK   A K + + L +G  +    F +LI   C++  +   L LL +M  
Sbjct: 909  GVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGK 968

Query: 508  CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
             +    + T  T++    K+G  +EA++++  M   G VPT ++
Sbjct: 969  EELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLS 1012


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 249/470 (52%), Gaps = 29/470 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           I Y ++++ L K +    A+ +   M  +GI   P+  SY  L+  +  +GK   A  + 
Sbjct: 459 ISYSIIIDGLCKDRREDEARELFEEMKAQGI--MPDVISYTTLIHGFCLSGKWEKAKCLF 516

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M    + P++   +  I +L    K+ +A + LE +   G   +V+T   L+KG C  
Sbjct: 517 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMK 576

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           HRI  A +L  +M   GC P+ V+  T+M  LC+   IK   +L + M++D++ +     
Sbjct: 577 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY----- 631

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                        + C P+ ++Y+ +++G C+ G  D+A+++ ++M   G  P+ +SYT+
Sbjct: 632 ------------GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTS 679

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G C +GK  +A+ + N   +    P+  T+SV++  L +EGK+ EA +++  M+++G
Sbjct: 680 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 739

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  V    L++ LC   ++  A +   +    GC  +VV + +L++G CQ G+++ AL
Sbjct: 740 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 799

Query: 500 SLLDDM------YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            L   M      Y     PD ++Y+ IID L K+GR +EA EL  +M + G++P V++Y 
Sbjct: 800 ELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYT 859

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEA 601
           ++IH +C+ G++ED   L  +M+ +  Q     Y+ +I   C  G +++A
Sbjct: 860 SLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 278/582 (47%), Gaps = 45/582 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           I Y ++++ L K +    A+ + + M  +G+   P+  SY  L+  +  +GK   A  + 
Sbjct: 166 ISYSIIIDGLCKDRREDEARELFKEMKAQGM--MPDVISYTSLIHGFCHSGKWEKAKCLF 223

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M    + P++      I +     K+ +A   LE M   G   +++TY+ LIKG C  
Sbjct: 224 NEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMK 283

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
           HRI +A +L   M   GC PD ++Y T+M  LC+  +I     L ++M+ND+        
Sbjct: 284 HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCI 343

Query: 312 -----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                      ++   +G++ EA EL+  M Q GCI D+VTY+ ++ G C    + +A  
Sbjct: 344 RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATW 403

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA----REMINTSEEEW--WTPNAITYSV 414
           +   M   GC+P+ ++Y   + GLC  G    A    +EM+N +        P  I+YS+
Sbjct: 404 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 463

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ GL ++ +  EA ++  EM  +G  P  +    LI   C  GK + AK    E L+ G
Sbjct: 464 IIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              +V   + LI   C+KG + EA  LL+ +       D VT TT++  L    R+ +AT
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKAT 583

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK-----CR---TAYN 586
           +L +KM   G +P VVT  T++   CQ G ++  L+L + MLS        C+    +Y+
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 643

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I+ LC  G  +EA ++  ++       D  +   L+  +   G     +K A  +FN 
Sbjct: 644 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSG----KWKDAKYLFNE 699

Query: 647 ----NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
                + PD+     + + L  EGK  EA+ L+   ++RG I
Sbjct: 700 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI 741



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 152/496 (30%), Positives = 245/496 (49%), Gaps = 32/496 (6%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D     M+++IL K      A  +L +M +RG       +S L+       ++  A +
Sbjct: 344 RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATW 403

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM----QLAGIT--PNVLTYNC 251
           +   MQK    P+ +   T +  L     +  AL+  + M       GI   P +++Y+ 
Sbjct: 404 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 463

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---- 307
           +I G C   R  +A +L +EM  +G  PD +SY T++   C   + ++ + L  +M    
Sbjct: 464 IIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523

Query: 308 ----VNDSNLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
               V  S++  D    +G++ EA +L+  + Q GCI DVVT T +V G C    + +A 
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKAT 583

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGK---SLEAREMINTSEEEWWT---PNAITYS 413
           ++  +M   GC PN V+    + GLC +G    +LE  + + +    +     PNAI+YS
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 643

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           +++ GL + G+  EA ++ +EM   G  P  +    LI   CR GK   AK    E ++ 
Sbjct: 644 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI 703

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   +V  F+ LI   C++G + EA  LL+ M      P+TVTYTT++  L  N R+ EA
Sbjct: 704 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 763

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--------QKCRTAY 585
           T+L MKM   G +P VVTY T++   CQ G ++  L+L +KMLS         +    +Y
Sbjct: 764 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISY 823

Query: 586 NQVIENLCSFGYLEEA 601
           + +I+ LC  G  +EA
Sbjct: 824 SIIIDGLCKHGREDEA 839



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 154/565 (27%), Positives = 273/565 (48%), Gaps = 33/565 (5%)

Query: 135 WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
           +  R D     M+++IL K      A  +L +M +RG       +S L+       ++  
Sbjct: 48  YSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 107

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM----QLAGI--TPNVLT 248
           A ++   MQK    P+ +   T +  L     +  AL+  + M       GI   P +++
Sbjct: 108 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS 167

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           Y+ +I G C   R  +A +L  EM  +G  PD +SY +++   C   + ++ + L  +M+
Sbjct: 168 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEML 227

Query: 309 NDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
           +              ++F  +G++ EA EL+  M   GCI D+VTY+ ++ G C    + 
Sbjct: 228 DVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRIS 287

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA----REMINTSEE---EWWTPNA 409
           +A ++   M   GC+P+ ++Y   + GLC  GK   A    +EM+N + +   +   P+ 
Sbjct: 288 EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDV 347

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            T S+++  L +EGK+ EA +++  M+++G     V  + LI+ LC E ++  A      
Sbjct: 348 TTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMS 407

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM------YLCKKDPDTVTYTTIIDA 523
               GC  + + + +L++G CQ G++  AL L  +M      Y  K  P  ++Y+ IID 
Sbjct: 408 MQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 467

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKC 581
           L K+ R +EA EL  +M ++G++P V++Y T+IH +C  G+ E    L  +ML    Q  
Sbjct: 468 LCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 527

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
            T  + +I+ LC  G + EA K+L  V++     D  TC  LV+    K     A ++  
Sbjct: 528 VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFL 587

Query: 642 RMFNRNLIPDLKLCKKVSERLILEG 666
           +M     +P++  C  + + L   G
Sbjct: 588 KMQKLGCMPNVVTCATLMKGLCQSG 612



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 265/558 (47%), Gaps = 77/558 (13%)

Query: 146 MMLEILSKTKLCQG---------AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           MM +++S T L  G         AK +   M   GI+        L+  + + GK+  A 
Sbjct: 196 MMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEAN 255

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L +M       +++  +T I  L + +++++A +    M+  G  P+ + Y  L+KG 
Sbjct: 256 ELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGL 315

Query: 257 CDLHRIKDAIKLIDEM-------PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-- 307
           C   +I  A+ L  EM        +K   PD  +   ++  LCKE ++ E  +L+E M  
Sbjct: 316 CQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQ 375

Query: 308 -------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                  V  S L      + RI EA  L   M ++GC PD +TY  ++ G C+ G ++ 
Sbjct: 376 RGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINI 435

Query: 358 AKKMLQQM------YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
           A ++ Q+M      Y   CKP  +SY+  ++GLC + +  EARE+    + +   P+ I+
Sbjct: 436 ALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVIS 495

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+ ++HG    GK  +A  +  EM+  G  P     ++LI  LC++GK+  A K ++  +
Sbjct: 496 YTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVI 555

Query: 472 NKGCAVNVVNFTSLI-----------------------------------RGFCQKGDLE 496
            +GC ++VV  T+L+                                   +G CQ G+++
Sbjct: 556 QRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIK 615

Query: 497 EALSLLDDM------YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
            AL L  +M      Y     P+ ++Y+ IID L K GR +EA EL  +M + G++P V+
Sbjct: 616 IALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVI 675

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
           +Y ++IH +C+ G+ +D   L  +M  +  Q   T ++ +I+ LC  G + EA ++L  +
Sbjct: 676 SYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVM 735

Query: 609 LRTASKADASTCHVLVES 626
           ++     +  T   LV+ 
Sbjct: 736 IQRGCIPNTVTYTTLVKG 753



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 232/469 (49%), Gaps = 41/469 (8%)

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT---------V 287
           M+LAG+ P+  T+N LI   C++ R+ + +  +  +  +G  PD V+Y           +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 288 MGYLCKEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGC 335
           +  LCKE ++ E  +L+E M         V  S L      + RI EA  L   M ++GC
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQM------YHHGCKPNTVSYTAFLNGLCHNGK 389
            PD +TY  ++ G C+ G ++ A ++ Q+M      Y   CKP  +SY+  ++GLC + +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             EARE+    + +   P+ I+Y+ ++HG    GK  +A  +  EM+  G  P      +
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI   C+EGK+  A + ++  +++GC +++V +++LI+G C K  + EA  L   M    
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLS-------KGLVPTVVTYRTVIHRYCQV 562
             PD + Y T++  L + G++  A  L  +ML+       K + P V T   +I   C+ 
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 563 GRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
           G+V +  +LLE M+ ++ C      Y+ +I+ LC    + EA  +   + +   + DA T
Sbjct: 361 GKVIEANELLEVMI-QRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAIT 419

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK--VSERLILEG 666
              L++     G   +A ++   M N      +K CK   +S  +I++G
Sbjct: 420 YGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIK-CKPTLISYSIIIDG 467



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 190/384 (49%), Gaps = 24/384 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D     +++++L K      A ++L ++ +RG        + L+       ++  A  + 
Sbjct: 527 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLF 586

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM----QLAGIT--PNVLTYNCLI 253
             MQK    PN++ C T +  L     +  AL   + M       GI   PN ++Y+ +I
Sbjct: 587 LKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIII 646

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---- 309
            G C   R  +A +L  EM   G  PD +SY +++   C+  + K+ + L  +MV+    
Sbjct: 647 DGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQ 706

Query: 310 -DSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
            D   F         +G++ EA EL+  M Q GCIP+ VTYT +V G C    + +A ++
Sbjct: 707 PDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQL 766

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGK---SLEAREMINTSEEEWWT---PNAITYSVV 415
             +M   GC P+ V+Y   + GLC  G    +LE  + + +   ++ T   P+ I+YS++
Sbjct: 767 FMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSII 826

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + GL + G+  EA ++ +EM   G  P  +    LI   CR GK++ AK    E +++G 
Sbjct: 827 IDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGV 886

Query: 476 AVNVVNFTSLIRGFCQKGDLEEAL 499
            +N V ++ +I GFC++G +++AL
Sbjct: 887 QLNAVTYSVMIHGFCKEGQIDKAL 910


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 254/496 (51%), Gaps = 13/496 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMYVLSM 201
           Y ++L +L++      A  + R M  R     P  F++ + A +  R G+   A+ +L  
Sbjct: 142 YNVVLSVLARADCHADALALYRRMVHRD-RVPPTTFTFGVAARALCRLGRADEALALLRG 200

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +    P+ ++  T IH L     + +A   L  M L G   +V T++ +++G C L R
Sbjct: 201 MARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGR 260

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-DSNLFHD---- 316
           +++A +L+D M  KGC P  ++Y  ++  LC+ ++  E R ++ ++   +  LF+     
Sbjct: 261 VREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGG 320

Query: 317 ---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
              +G++ EA EL   M   GC PD  TY+ +++G C++G +  A ++L++M   G  PN
Sbjct: 321 CLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPN 380

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            V+YT  L+  C NG   + R ++     +  T N+  Y+ +++ L ++G++ EA  +++
Sbjct: 381 VVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQ 440

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM  +G  P     N +I  LC   +M+ A+   +  L +G   N + + ++I    + G
Sbjct: 441 EMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDG 500

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
             ++A+ L  +M L     D V+Y  +I A+ K+G V+ +  L+ +M  KG+ P  V+Y 
Sbjct: 501 RWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYN 560

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            +I   C+  RV D L+L ++ML++        YN +I  LC  G++  A  +L K+   
Sbjct: 561 ILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE 620

Query: 612 ASKADASTCHVLVESY 627
               D  T ++L+  +
Sbjct: 621 NVHPDIITYNILISWH 636



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 169/342 (49%), Gaps = 17/342 (4%)

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVA 208
           L++ KL + A  +   M  +G  C+P+A +Y  LM    + G++ +A+ +L  M+K   A
Sbjct: 322 LAEGKLAE-ATELYETMGLKG--CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFA 378

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           PN++     +H              LE M   G+T N   YN +I   C   R+ +A+ L
Sbjct: 379 PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL 438

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHD--- 316
           I EM  +GC+PD  SY T++ +LC  ++++E   + E ++ +         + + H    
Sbjct: 439 IQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLR 498

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            GR ++A  L  +M   GC  DVV+Y  ++   C+ G +D++  +L++M   G KPN VS
Sbjct: 499 DGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVS 558

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   ++ LC   +  +A E+      +   P+ +TY+ +++GL + G +  A +++ ++ 
Sbjct: 559 YNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLH 618

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
            +   P  +  N+LI   C+   +D A   +   +   C V 
Sbjct: 619 NENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVG 660



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 197/462 (42%), Gaps = 65/462 (14%)

Query: 265 AIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
           A+ L+D++P + G  P   SY  V+  L +     +   L  +MV+       + R+   
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVH-------RDRVP-- 172

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
                        P   T+       CR+G  D+A  +L+ M  HGC P+ V Y   ++ 
Sbjct: 173 -------------PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHA 219

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           LC  G   EA  ++N         +  T+  V+ G+   G++ EA  +V  M+ KG  P 
Sbjct: 220 LCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPG 279

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            +    L+Q LCR  + D A+      L +   +NVV F ++I G   +G L EA  L +
Sbjct: 280 VMTYGFLLQGLCRVRQADEARAM----LGRVPELNVVLFNTVIGGCLAEGKLAEATELYE 335

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
            M L    PD  TY+ ++  L K GR+  A  L+ +M  KG  P VVTY  V+H +C+ G
Sbjct: 336 TMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNG 395

Query: 564 RVEDLLKLLEKMLSK----------------------------------QKCRT---AYN 586
             +D   LLE+M +K                                  Q C     +YN
Sbjct: 396 MWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYN 455

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I +LC+   +EEA  +   +L     A+  T + ++ + L  G    A ++A  M   
Sbjct: 456 TIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILH 515

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
               D+     + + +  +G  + +  L+    E+G I+P +
Sbjct: 516 GCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG-IKPNN 556



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 130/256 (50%), Gaps = 12/256 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y ++L    K  +    + +L  M+ +G+    + ++ ++ A  + G++  AM ++  
Sbjct: 382 VTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQE 441

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+     P++   NT I+ L    ++ +A    E +   G+  N +TYN +I       R
Sbjct: 442 MRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGR 501

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE----VRDLMEKMVNDSNLFHD- 316
            +DA++L  EM L GCS D VSY  ++  +CK+  +      + ++ EK +  +N+ ++ 
Sbjct: 502 WQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNI 561

Query: 317 -------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                  + R+ +A EL  QM   G  PD+VTY  ++NG C++G +  A  +L+++++  
Sbjct: 562 LISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEN 621

Query: 370 CKPNTVSYTAFLNGLC 385
             P+ ++Y   ++  C
Sbjct: 622 VHPDIITYNILISWHC 637



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 81/165 (49%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  ++  L +    Q A R+ + M   G      +++ L+ A  + G +  ++ +L  
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  + PN +  N  I  L    ++  AL   ++M   G+ P+++TYN LI G C +  
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           +  A+ L++++  +   PD ++Y  ++ + CK + + +   L+ +
Sbjct: 607 MHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 68/131 (51%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ + K      +  +L  MA +GI+    +++ L+    +  ++R+A+ + 
Sbjct: 520 DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELS 579

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    +AP+++  NT I+ L     +  AL  LE++    + P+++TYN LI  +C +
Sbjct: 580 KQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 639

Query: 260 HRIKDAIKLID 270
             + DA  L++
Sbjct: 640 RLLDDAAMLLN 650


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 151/562 (26%), Positives = 260/562 (46%), Gaps = 62/562 (11%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSM 201
           Y ++L+ L      Q A  +L++M   G +C P+  SY  V   + + G L  A      
Sbjct: 165 YNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + PN++  ++ I  L     + KA+  L  M   G+ PN  TYN ++ GYC   +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            K+AI  + +M   G  PD V+Y ++M YLCK                        GR  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK-----------------------NGRCT 321

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA+++ + M++ G  P++ TY  ++ G+   G L +   +L  M  +G  PN   ++  +
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
                 GK  +A  + +   ++   P+ +TY  V+  L + G++ +A     +M+ +   
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  +  N LI SLC   K D AK+ + E L++G  ++ + F S+I   C++G + E+  L
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKL 501

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            D M      PD +TY+T+ID     G+++EAT+L+  M+S G+ P  VTY T+I+ YC+
Sbjct: 502 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK 561

Query: 562 VGRVEDLLKLLEKMLSK-----------------QKCRTA-------------------- 584
           + R+ED L L  +M S                  Q  RTA                    
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN ++  LC     +EA ++   +  T  + +  T ++++ + L  G    A  +   + 
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 645 NRNLIPDLKLCKKVSERLILEG 666
              L+PD++    ++E LI +G
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQG 703



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 243/482 (50%), Gaps = 22/482 (4%)

Query: 167 MARRGI-ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           MAR G  E  P   +Y  LM +   AG+L      L  + K     + +     +  L  
Sbjct: 79  MARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCA 138

Query: 224 GNKLAKALRF-LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG--CSPD 280
             + + A+   L RM   G  PNV +YN L+KG CD +R ++A++L+  MP  G  C PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPD 198

Query: 281 KVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSNLFHDQGR---IEEAKELVN 328
            VSY TV+    KE  + +          R ++  +V  S++     +   +++A E++ 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            M + G +P+  TY ++V+G+C  G+  +A   L++M+  G +P+ V+Y + ++ LC NG
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EAR+M ++  +    P   TY  ++ G   +G L E   ++  MV+ G  P     +
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           +LI +  ++GK+D A     +   +G   + V + ++I   C+ G +E+A+   + M   
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV--- 565
           +  P  + Y ++I +L    + ++A EL+++ML +G+    + + ++I  +C+ GRV   
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 566 EDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           E L  L+ ++  K    T Y+ +I+  C  G ++EA K+L  ++    K D  T + L+ 
Sbjct: 499 EKLFDLMVRIGVKPDIIT-YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 626 SY 627
            Y
Sbjct: 558 GY 559



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/534 (22%), Positives = 243/534 (45%), Gaps = 51/534 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K +    A  VL  M + G+      ++ ++  Y  +G+ + A+  L  
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC---- 257
           M    V P+++  N+ +  L    +  +A +  + M   G+ P + TY  L++GY     
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 258 --DLH-----------------------------RIKDAIKLIDEMPLKGCSPDKVSYYT 286
             ++H                             ++  A+ +  +M  +G +PD V+Y T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQ---GRIEEAKELVNQMSQMG 334
           V+G LCK  R+++     E+M+++         ++L H      + ++AKEL+ +M   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
              D + + ++++  C+ G + +++K+   M   G KP+ ++Y+  ++G C  GK  EA 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +++ +       P+ +TY+ +++G  +  ++ +A  + REM   G  P  +  N+++Q L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            +  +   AK+        G  + +  +  ++ G C+    +EAL +  ++ L     +T
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            T+  +I AL K GR +EA +L   + + GLVP V TY  +     + G +E+L  L   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 575 MLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           M  +  C       N ++  L   G +  AG  L  +       +AST  + ++
Sbjct: 715 M-EENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 228/452 (50%), Gaps = 34/452 (7%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           RAG+   A   + + ++    PN     + IH L    KL +A   L+ M+  GI P V 
Sbjct: 10  RAGQHGQA---VQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVA 66

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            +N +IKG C   R  DA+     +    C+PD +++  ++  L K  R++E   + E M
Sbjct: 67  VHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESM 126

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
              S                       C+P+VVTYT V+NG C+ G+LD+A ++L  M  
Sbjct: 127 HTSSQ----------------------CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNE 164

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC PN ++Y+  + GLC  G++ +   ++       + P+ I Y+ +++GL +  +L E
Sbjct: 165 TGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDE 224

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A ++V+ M++ G +PT V  N L++  CR  ++D A + +Q    +GC  +V+N+ ++I 
Sbjct: 225 ALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIA 284

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV------EEATELMMKML 541
           G C+   L++A +LL  M   +  PD +TY+TIID L K+ RV      E A E++  M 
Sbjct: 285 GLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMK 344

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLE 599
             G  P   TY  VI   C+  + +  L LL +M+  +     ++++ VI +LC    L+
Sbjct: 345 QTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLD 404

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            A KI G +     K +      L++  L+KG
Sbjct: 405 AAYKIFGMMSERECKPNPVAYAALIDG-LSKG 435



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 234/467 (50%), Gaps = 24/467 (5%)

Query: 171 GIECRPE--AFSYLMVAYSRAGKLRNAMYVL-SMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           G +C P+   F+ L+ A  ++G++  A  +  SM   +   PN++   T I+ L    KL
Sbjct: 93  GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
            +A+  L+ M   G  PNV+TY+ L++G C   R      L+ EM  +G  PD + Y T+
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGC 335
           +  LCK +R+ E  +L++ M+                LF    +++ A  L+  MS+ GC
Sbjct: 213 LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGC 272

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK-----S 390
            PDV+ Y  V+ G CR   LD A+ +L+QM    C P+ ++Y+  ++GLC + +      
Sbjct: 273 PPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWK 332

Query: 391 LEAR-EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
           LEA  E++   ++    PNA TY+VV+ GL R  K  +A  ++R M+     P     ++
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSM 392

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           +I SLC+   +D A K       + C  N V + +LI G  + G++++A+ + + M    
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF 452

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
           + P   TY +++D L   GR+EEA  ++  M+ K   P   +Y  +I   C+V  VE+  
Sbjct: 453 R-PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAY 511

Query: 570 KLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           +L + + +K        YN ++  LC    L +A  +  K++    K
Sbjct: 512 ELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 237/516 (45%), Gaps = 61/516 (11%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P  F+Y  L+    +AGKL  A  +L  M+   + P + + N  I  L    +   AL
Sbjct: 26  CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDAL 85

Query: 232 RFLERMQLAGITPNVLTYNCL------------------------------------IKG 255
            + + +     TP+++T+N L                                    I G
Sbjct: 86  GYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVING 145

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---- 311
            C   ++  AI+L+D M   GC P+ ++Y  ++  LCK  R  +   L+++M        
Sbjct: 146 LCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPD 205

Query: 312 --------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   N      R++EA ELV  M + GC P VVTY +++  FCR  ++D+A +++Q
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ 265

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR-- 421
            M   GC P+ ++Y   + GLC + +  +A+ ++         P+ ITYS ++ GL +  
Sbjct: 266 VMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325

Query: 422 ----EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
               + KL  AC+++  M + G  P      ++I+ LCR  K   A   ++  ++     
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           ++ +F+ +I   C+  DL+ A  +   M   +  P+ V Y  +ID LSK G V++A  + 
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV- 444

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCS 594
            +++ +   P V TY +V+   C VGR+E+ ++++E M+ K+ C     +Y  +I  LC 
Sbjct: 445 FELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKE-CFPDGASYGALIRGLCR 503

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
              +EEA ++   V       +    +VLV     K
Sbjct: 504 VSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKK 539



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 218/464 (46%), Gaps = 40/464 (8%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY-- 181
           A Q F       +   + + Y  ++  L K      A  +L LM   G  C P   +Y  
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETG--CCPNVITYSV 176

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+    +AG+      +L  M +    P++++ NT ++ L    +L +AL  ++ M  +G
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             P V+TYN L++ +C   ++  A +LI  M  +GC PD ++Y TV+  LC++       
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRD------- 289

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC---RVG---EL 355
                            R+++A+ L+ QM    C+PDV+TY+ +++G C   RV    +L
Sbjct: 290 ----------------ARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKL 333

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           + A ++L+ M   GC PN  +Y   + GLC   KS +A  ++    +    P+  ++S+V
Sbjct: 334 EAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMV 393

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK---FMQECLN 472
           +  L +   L  A  +   M ++   P PV    LI  L + G++D A +    M E   
Sbjct: 394 IGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFR 453

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            G    V  + S++ G C  G +EEA+ +++ M   +  PD  +Y  +I  L +   VEE
Sbjct: 454 PG----VATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEE 509

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           A EL   + +KG    V  Y  +++  C+  R+ D   +  K++
Sbjct: 510 AYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLI 553



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 167/359 (46%), Gaps = 58/359 (16%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           ++ D I+Y  +L  L K++    A  +++LM R G  C P   +Y  LM  + R+ ++  
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG--CYPTVVTYNSLMELFCRSKQVDR 259

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  ++ +M +    P+++  NT I  L    +L  A   L++M  A   P+V+TY+ +I 
Sbjct: 260 AFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIID 319

Query: 255 GYCDLHRI------KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           G C   R+      + A ++++ M   GC P+  +Y  V+  LC+ ++ ++   L+ +M+
Sbjct: 320 GLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMI 379

Query: 309 NDSNLFHDQGR-------------IEEAKELVNQMSQMGCIPD----------------- 338
            DS +  D                ++ A ++   MS+  C P+                 
Sbjct: 380 -DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEV 438

Query: 339 -----------------VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
                            V TY +V++G C VG +++A +M++ M H  C P+  SY A +
Sbjct: 439 DKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALI 498

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
            GLC      EA E+    E + +      Y+V+++ L ++ +LS+A  V  ++++ G+
Sbjct: 499 RGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 159/611 (26%), Positives = 274/611 (44%), Gaps = 61/611 (9%)

Query: 110 QICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR 169
           ++   LR QAD   ALQ    A  +  +     VY  +++ L         + ++R M R
Sbjct: 58  RLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRR 117

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAM-YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
            G E         + +Y+R  +  +A+  V + +    V  +  + N  ++VL  G+++ 
Sbjct: 118 EGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMK 177

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
                   M   GI P+V+T N LIK  C  H+++ A+ +++EM     +PD+ ++ T+M
Sbjct: 178 LLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLM 237

Query: 289 GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
                                    F ++G IE A  +  +M + GC P  VT   ++NG
Sbjct: 238 -----------------------QGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLING 274

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
           +C++G ++ A   +Q+    G +P+ V+Y  F++ LC NG    A ++++   +E   P+
Sbjct: 275 YCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPD 334

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
             TY+ V++ L + G+L EA  +V +MV +G  P     N LI +LC + +++ A    +
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAR 394

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD--------------- 513
           E   KG + +V  F  LI   C+ GD    + L ++M      PD               
Sbjct: 395 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMG 454

Query: 514 --------------------TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
                               TVTY TIIDAL K  R+EEA E+  +M + G+  + VT+ 
Sbjct: 455 KLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFN 514

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           T+I   C+  R++D  +L+E+M+ +  Q     YN ++ + C  G L++A  IL  +   
Sbjct: 515 TLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTAN 574

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
             + D  T   L+      G   +A K+   M  + + P  K    V + L       +A
Sbjct: 575 GFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDA 634

Query: 672 DTLMLRFVERG 682
            +L     E G
Sbjct: 635 LSLFREMTEVG 645



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 257/543 (47%), Gaps = 50/543 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  VY  +L +L++    +  + V   M  RGI+      + L+ A  RA ++R A+ +L
Sbjct: 159 DTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLML 218

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M   AVAP+     T +   +    +  ALR   +M   G +P  +T N LI GYC +
Sbjct: 219 EEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKM 278

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK---EVRDLMEKMVNDSNLF-- 314
            R++DA+  I +    G  PD+V+Y T +  LC+   +    +V DLM +  +D ++F  
Sbjct: 279 GRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTY 338

Query: 315 -------HDQGRIEEAKELVNQMSQMGCIPD----------------------------- 338
                     G ++EAK +VNQM   GC+PD                             
Sbjct: 339 NTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTV 398

Query: 339 ------VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
                 V T+  ++N  C+VG+     ++ ++M   GC P+ V+Y   ++ LC  GK + 
Sbjct: 399 KGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVN 458

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A +++   E      + +TY+ ++  L ++ ++ EA +V  +M   G   + V  N LI 
Sbjct: 459 ALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLID 518

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+  ++D A + +++ + +G   + + + S++  +C++GDL++A  +L+ M     + 
Sbjct: 519 GLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEI 578

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D VTY T+I+ L K GR + A +L+  M  KG+ PT   Y  VI    +   + D L L 
Sbjct: 579 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLF 638

Query: 573 EKMLSKQKCRTA--YNQVIENLC-SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
            +M    +   A  Y  V   LC   G ++EA   L +++      + S+  +L E  LN
Sbjct: 639 REMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLN 698

Query: 630 KGI 632
            G+
Sbjct: 699 LGM 701



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 172/379 (45%), Gaps = 62/379 (16%)

Query: 139 HDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRN 194
           HDP V  Y  ++  LSK      AK ++  M  RG  C P+   F+ L+VA     +L  
Sbjct: 331 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG--CLPDTTTFNTLIVALCSQNRLEE 388

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +   +    ++P++   N  I+ L         +R  E M+ +G  P+ +TYN LI 
Sbjct: 389 ALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILID 448

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------- 307
             C + ++ +A+ L+ EM   GC    V+Y T++  LCK+ RI+E  ++ ++M       
Sbjct: 449 HLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISR 508

Query: 308 --VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
             V  + L        RI++A EL+ QM + G  P  +TY +++  +C+ G+L +A  +L
Sbjct: 509 SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADIL 568

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA----------------------------- 393
           + M  +G + + V+Y   +NGLC  G++  A                             
Sbjct: 569 ETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRR 628

Query: 394 ----------REMINTSEEEWWTPNAITYSVVMHGL-RREGKLSEACDVVREMVKKGFFP 442
                     REM    E     P+A+TY +V  GL R  G + EA D + EMV KGF P
Sbjct: 629 NNLRDALSLFREMTEVGEP----PDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMP 684

Query: 443 TPVEINLLIQSLCREGKMD 461
                 +L + L   G  D
Sbjct: 685 EFSSFRMLAEGLLNLGMDD 703


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 151/562 (26%), Positives = 260/562 (46%), Gaps = 62/562 (11%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSM 201
           Y ++L+ L      Q A  +L++M   G +C P+  SY  V   + + G L  A      
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + PN++  N+ I  L     + KA+  L  M   G+ PN  TYN ++ GYC   +
Sbjct: 225 MLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            K+AI  + +M   G  PD V+Y ++M YLCK                        GR  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK-----------------------NGRCT 321

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA+++ + M++ G  P++ TY  ++ G+   G L +   +L  M  +G  PN   ++  +
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
                 GK  +A  + +   ++   P+ +TY  V+  L + G++ +A     +M+ +   
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  +  N LI SLC   K D AK+ + E L++G  ++ + F S+I   C++G + E+  L
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKL 501

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            D M      P+ +TY+T+ID     G+++EAT+L+  M+S G+ P  VTY T+I+ YC+
Sbjct: 502 FDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK 561

Query: 562 VGRVEDLLKLLEKMLSK-----------------QKCRTA-------------------- 584
           + R+ED L L  +M S                  Q  RTA                    
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN ++  LC     +EA ++   +  T  + +  T ++++ + L  G    A  +   + 
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 645 NRNLIPDLKLCKKVSERLILEG 666
              L+PD++    ++E LI +G
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQG 703



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 243/482 (50%), Gaps = 22/482 (4%)

Query: 167 MARRGI-ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           MAR G  E  P   +Y  L+ +   AG+L      L  + K     + +     +  L  
Sbjct: 79  MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138

Query: 224 GNKLAKALRF-LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG--CSPD 280
             + + A+   L RM   G  PNV +YN L+KG CD +R ++A++L+  MP  G  C PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 281 KVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSNLFHDQGR---IEEAKELVN 328
            VSY TV+    KE  + +          R ++  +V  +++     +   +++A E++ 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLT 258

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            M + G +P+  TY ++V+G+C  G+  +A   L++M+  G +P+ V+Y + ++ LC NG
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EAR+M ++  +    P   TY  ++ G   +G L E   ++  MV+ G  P     +
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           +LI +  ++GK+D A     +   +G   + V + ++I   C+ G +E+A+   + M   
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV--- 565
           +  P  + Y ++I +L    + ++A EL+++ML +G+    + + ++I  +C+ GRV   
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 566 EDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           E L  L+ ++  K    T Y+ +I+  C  G ++EA K+L  ++    K D  T + L+ 
Sbjct: 499 EKLFDLMVRIGVKPNIIT-YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 626 SY 627
            Y
Sbjct: 558 GY 559



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 122/534 (22%), Positives = 243/534 (45%), Gaps = 51/534 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K +    A  VL  M + G+      ++ ++  Y  +G+ + A+  L  
Sbjct: 235 VTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC---- 257
           M    V P+++  N+ +  L    +  +A +  + M   G+ P + TY  L++GY     
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 258 --DLH-----------------------------RIKDAIKLIDEMPLKGCSPDKVSYYT 286
             ++H                             ++  A+ +  +M  +G +PD V+Y T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQ---GRIEEAKELVNQMSQMG 334
           V+G LCK  R+++     E+M+++         ++L H      + ++AKEL+ +M   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
              D + + ++++  C+ G + +++K+   M   G KPN ++Y+  ++G C  GK  EA 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEAT 534

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +++ +       P+ +TY+ +++G  +  ++ +A  + REM   G  P  +  N+++Q L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            +  +   AK+        G  + +  +  ++ G C+    +EAL +  ++ L     +T
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            T+  +I AL K GR +EA +L   + + GLVP V TY  +     + G +E+L  L   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 575 MLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           M  +  C       N ++  L   G +  AG  L  +       +AST  + ++
Sbjct: 715 M-EENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 157/600 (26%), Positives = 275/600 (45%), Gaps = 77/600 (12%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRV-LRLMARRGIE----------------CRPEAF 179
           ++H    +  M+ IL +++    A+ V LR++ + G+                   P  F
Sbjct: 128 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 187

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
             L+  Y +A KLR       +++   +  ++  CN+ +  LV    +  A    + +  
Sbjct: 188 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 247

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
           +G+  NV T N +I   C   +I++    + +M  KG  PD V+Y T++   C+      
Sbjct: 248 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR------ 301

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                            QG +EEA EL++ MS  G  P V TY A++NG C+ G+  +AK
Sbjct: 302 -----------------QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 344

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            +L +M   G  P+T +Y   L   C N   ++A  + +    +   P+ +++S ++  L
Sbjct: 345 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 404

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            + G L +A    R+M   G  P  V   +LI   CR G M  A K   E L +GC ++V
Sbjct: 405 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 464

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           V + +++ G C++  L EA  L  +M      PD  T+TT+I+  SK+G + +A  L   
Sbjct: 465 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 524

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGY 597
           M+ + L P VVTY T+I  +C+   +E + +L   M+S++      +Y  +I   C+ G 
Sbjct: 525 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 584

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESY----------------LNKGI--------P 633
           + EA ++  +++    +A   TC+ +V+ Y                L KGI         
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 644

Query: 634 LL-----------AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L+           A+ +  +M N  L+PD+     +      +G+ +EA+ +ML+ +ERG
Sbjct: 645 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 704



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 250/563 (44%), Gaps = 34/563 (6%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPI-------VYYM--MLEILSK 153
            R LK + +C  + +       L    W D  W    + +       VY +  M+  L K
Sbjct: 207 FRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK 266

Query: 154 TKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI 213
            +  +  K  L  M  +G+      ++ L+ AY R G L  A  ++  M    + P +  
Sbjct: 267 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFT 326

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
            N  I+ L    K  +A   L+ M   G++P+  TYN L+   C    + DA ++ DEMP
Sbjct: 327 YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMP 386

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQM 333
            +G  PD VS+  ++G L K                        G +++A +    M   
Sbjct: 387 SQGVVPDLVSFSALIGLLSK-----------------------NGCLDQALKYFRDMKNA 423

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  PD V YT ++ GFCR G + +A K+  +M   GC  + V+Y   LNGLC      EA
Sbjct: 424 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 483

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            E+     E    P+  T++ +++G  ++G +++A  +   M+++   P  V  N LI  
Sbjct: 484 DELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 543

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C+  +M+   +   + +++    N +++  LI G+C  G + EA  L D+M     +  
Sbjct: 544 FCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 603

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            +T  TI+    + G   +A E +  ML KG+VP  +TY T+I+ + +   ++    L+ 
Sbjct: 604 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 663

Query: 574 KMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           KM +         YN ++      G ++EA  I+ K++      D ST   L+  ++ + 
Sbjct: 664 KMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQN 723

Query: 632 IPLLAYKVACRMFNRNLIPDLKL 654
               A++V   M  R  +PD K 
Sbjct: 724 NLKEAFRVHDEMLQRGFVPDDKF 746



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/559 (25%), Positives = 264/559 (47%), Gaps = 14/559 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           +P+V+ +++    + +  +      R++  +G+     A + L+    + G +  A  + 
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + ++ V  N+   N  I+ L    K+     FL  M+  G+ P+V+TYN LI  YC  
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK---RIKEVRDLMEK--MVNDSNLF 314
             +++A +L+D M  KG  P   +Y  ++  LCK     R K V D M K  M  D+  +
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 362

Query: 315 H-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +           + +A+ + ++M   G +PD+V+++A++    + G LDQA K  + M +
Sbjct: 363 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 422

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+ V YT  + G C NG   EA ++ +   E+    + +TY+ +++GL +E  LSE
Sbjct: 423 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE 482

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A ++  EM ++G FP       LI    ++G M+ A    +  + +    +VV + +LI 
Sbjct: 483 ADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 542

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC+  ++E+   L +DM   +  P+ ++Y  +I+     G V EA  L  +M+ KG   
Sbjct: 543 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEA 602

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKIL 605
           T++T  T++  YC+ G      + L  ML K        YN +I        ++ A  ++
Sbjct: 603 TIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALV 662

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            K+  +    D  T +V++  +  +G    A  +  +M  R + PD      +    + +
Sbjct: 663 NKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQ 722

Query: 666 GKSEEADTLMLRFVERGHI 684
              +EA  +    ++RG +
Sbjct: 723 NNLKEAFRVHDEMLQRGFV 741


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 240/467 (51%), Gaps = 25/467 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   G+      +S L+  + R  +L  A+ VL  M K    PN++  ++ ++      +
Sbjct: 107 MQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++A+  +++M + G  PN +T+N LI G    ++  +A+ LID M  KGC PD V+Y  
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGV 226

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           V+  LCK                       +G  + A  L+N+M Q    P V+ YT ++
Sbjct: 227 VVNGLCK-----------------------RGDTDLAFILLNKMEQGKLEPGVLIYTTII 263

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C+   +D A  + ++M   G +PN V+Y++ ++ LC+ G+  +A  +++   E    
Sbjct: 264 DGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+  T+S ++    +EGKL EA  +  EMVK+   P+ V  + LI   C   ++D AK+ 
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +  ++K C  +VV++++LI+GFC+   ++E + L  +M       +TVTYTT+I  L +
Sbjct: 384 FEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQ 443

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--A 584
            G  + A E+  +M+S G+ P ++TY T++   C+ G++E  + + E +   +   T   
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           YN +IE +C  G +E+   +   +     K D    + ++  +  KG
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 245/512 (47%), Gaps = 26/512 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS L+ A ++  K    + +   MQ   +  N    +  I+     ++L  AL  L +M 
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  PN++T + L+ GYC   RI +A+ L+D+M + G  P+ V++ T++  L       
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL------- 196

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                           H++    EA  L+++M   GC PD+VTY  VVNG C+ G+ D A
Sbjct: 197 --------------FLHNKA--SEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L +M     +P  + YT  ++GLC N    +A  +    E +   PN +TYS ++  
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L   G+ S+A  ++ +M+++   P     + LI +  +EGK+  A+K   E + +    +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +V ++SLI GFC    L+EA  + + M      PD V+Y+T+I    K  RV+E  EL  
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFR 420

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFG 596
           +M  +GLV   VTY T+I    Q G  +   ++ ++M+S         YN +++ LC  G
Sbjct: 421 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            LE+A  +   + R+  +    T ++++E     G     + + C +  + + PD+    
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
            +      +G  EEAD L     E G + P S
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTL-PNS 571



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 252/510 (49%), Gaps = 21/510 (4%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           H+   Y +++    +      A  VL  M + G E      S L+  Y  + ++  A+ +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +  M      PN +  NT IH L + NK ++A+  ++RM   G  P+++TY  ++ G C 
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VN 309
                 A  L+++M      P  + Y T++  LCK K + +  +L ++M         V 
Sbjct: 234 RGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVT 293

Query: 310 DSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            S+L     + GR  +A  L++ M +    PDV T++A+++ F + G+L +A+K+  +M 
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                P+ V+Y++ +NG C + +  EA++M      +   P+ ++YS ++ G  +  ++ 
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVD 413

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           E  ++ REM ++G     V    LIQ L + G  D A++  +E ++ G   N++ + +L+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C+ G LE+A+ + + +   K +P   TY  +I+ + K G+VE+  +L   +  KG+ 
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM-----LSKQKCRTAYNQVIENLCSFGYLEEA 601
           P VV Y T+I  +C+ G  E+   L ++M     L    C   YN +I      G  E +
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC---YNTLIRARLRDGDREAS 590

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKG 631
            +++ ++       DAST   LV + L+ G
Sbjct: 591 AELIKEMRSCGFAGDASTIG-LVTNMLHDG 619



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 215/436 (49%), Gaps = 18/436 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           Y+ + + +  ++  L        A  ++  M  +G  C+P+  +Y +V     + G    
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKG--CQPDLVTYGVVVNGLCKRGDTDL 239

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +L+ M++  + P +LI  T I  L     +  AL   + M+  GI PNV+TY+ LI 
Sbjct: 240 AFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
             C+  R  DA +L+ +M  +  +PD  ++  ++    KE ++ E   L ++MV  S   
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                    N F    R++EAK++   M    C PDVV+Y+ ++ GFC+   +D+  ++ 
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF 419

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           ++M   G   NTV+YT  + GL   G    A+E+      +   PN +TY+ ++ GL + 
Sbjct: 420 REMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM-DGAKKFMQECLNKGCAVNVVN 481
           GKL +A  V   + +    PT    N++I+ +C+ GK+ DG   F    L KG   +VV 
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGVKPDVVA 538

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           + ++I GFC+KG  EEA +L  +M      P++  Y T+I A  ++G  E + EL+ +M 
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598

Query: 542 SKGLVPTVVTYRTVIH 557
           S G      T   V +
Sbjct: 599 SCGFAGDASTIGLVTN 614



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 193/409 (47%), Gaps = 27/409 (6%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           Q +     ++Y  +++ L K K    A  + + M  +GI      +S L+      G+  
Sbjct: 249 QGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
           +A  +LS M +  + P++   +  I   V   KL +A +  + M    I P+++TY+ LI
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            G+C   R+ +A ++ + M  K C PD VSY T++   CK KR+                
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRV---------------- 412

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                  +E  EL  +MSQ G + + VTYT ++ G  + G+ D A+++ ++M   G  PN
Sbjct: 413 -------DEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            ++Y   L+GLC NGK  +A  +    +     P   TY++++ G+ + GK+ +  D+  
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            +  KG  P  V  N +I   CR+G  + A    +E    G   N   + +LIR   + G
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           D E +  L+ +M  C    D  T   + + L  +GR++++    + MLS
Sbjct: 586 DREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS---FLDMLS 630



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 129/302 (42%), Gaps = 38/302 (12%)

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           E KL +A  +  EMVK   FP+ +E + L+ ++ +  K D      ++  N G   N   
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYT 118

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           ++ LI  FC++  L  AL++L  M     +P+ VT +++++    + R+ EA  L+ +M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--------------QKCRTA--- 584
             G  P  VT+ T+IH      +  + + L+++M++K                C+     
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 585 --------------------YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
                               Y  +I+ LC   ++++A  +  ++     + +  T   L+
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
               N G    A ++   M  R + PD+     + +  + EGK  EA+ L    V+R  I
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS-I 357

Query: 685 QP 686
            P
Sbjct: 358 DP 359


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 151/562 (26%), Positives = 260/562 (46%), Gaps = 62/562 (11%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSM 201
           Y ++L+ L      Q A  +L++M   G +C P+  SY  V   + + G L  A      
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + PN++  ++ I  L     + KA+  L  M   G+ PN  TYN ++ GYC   +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            K+AI  + +M   G  PD V+Y ++M YLCK                        GR  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK-----------------------NGRCT 321

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA+++ + M++ G  P++ TY  ++ G+   G L +   +L  M  +G  PN   ++  +
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
                 GK  +A  + +   ++   P+ +TY  V+  L + G++ +A     +M+ +   
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  +  N LI SLC   K D AK+ + E L++G  ++ + F S+I   C++G + E+  L
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKL 501

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            D M      PD +TY+T+ID     G+++EAT+L+  M+S G+ P  VTY T+I+ YC+
Sbjct: 502 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK 561

Query: 562 VGRVEDLLKLLEKMLSK-----------------QKCRTA-------------------- 584
           + R+ED L L  +M S                  Q  RTA                    
Sbjct: 562 ISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN ++  LC     +EA ++   +  T  + +  T ++++ + L  G    A  +   + 
Sbjct: 622 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 681

Query: 645 NRNLIPDLKLCKKVSERLILEG 666
              L+PD++    ++E LI +G
Sbjct: 682 ANGLVPDVRTYSLMAENLIEQG 703



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 243/482 (50%), Gaps = 22/482 (4%)

Query: 167 MARRGI-ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           MAR G  E  P   +Y  L+ +   AG+L      L  + K     + +     +  L  
Sbjct: 79  MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138

Query: 224 GNKLAKALRF-LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG--CSPD 280
             + + A+   L RM   G  PNV +YN L+KG CD +R ++A++L+  MP  G  C PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 281 KVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSNLFHDQGR---IEEAKELVN 328
            VSY TV+    KE  + +          R ++  +V  S++     +   +++A E++ 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            M + G +P+  TY ++V+G+C  G+  +A   L++M+  G +P+ V+Y + ++ LC NG
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EAR+M ++  +    P   TY  ++ G   +G L E   ++  MV+ G  P     +
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           +LI +  ++GK+D A     +   +G   + V + ++I   C+ G +E+A+   + M   
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV--- 565
           +  P  + Y ++I +L    + ++A EL+++ML +G+    + + ++I  +C+ GRV   
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498

Query: 566 EDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           E L  L+ ++  K    T Y+ +I+  C  G ++EA K+L  ++    K D  T + L+ 
Sbjct: 499 EKLFDLMVRIGVKPDIIT-YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 626 SY 627
            Y
Sbjct: 558 GY 559



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/534 (22%), Positives = 243/534 (45%), Gaps = 51/534 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K +    A  VL  M + G+      ++ ++  Y  +G+ + A+  L  
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC---- 257
           M    V P+++  N+ +  L    +  +A +  + M   G+ P + TY  L++GY     
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 258 --DLH-----------------------------RIKDAIKLIDEMPLKGCSPDKVSYYT 286
             ++H                             ++  A+ +  +M  +G +PD V+Y T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQ---GRIEEAKELVNQMSQMG 334
           V+G LCK  R+++     E+M+++         ++L H      + ++AKEL+ +M   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
              D + + ++++  C+ G + +++K+   M   G KP+ ++Y+  ++G C  GK  EA 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +++ +       P+ +TY+ +++G  +  ++ +A  + REM   G  P  +  N+++Q L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            +  +   AK+        G  + +  +  ++ G C+    +EAL +  ++ L     +T
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            T+  +I AL K GR +EA +L   + + GLVP V TY  +     + G +E+L  L   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 575 MLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           M  +  C       N ++  L   G +  AG  L  +       +AST  + ++
Sbjct: 715 M-EENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 251/476 (52%), Gaps = 15/476 (3%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           +AGK   ++Y L  +      P++++C   I        + KA R +E ++ +   P+V 
Sbjct: 90  KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILE-SHTEPDVF 148

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            YN +I G+C +++I+ A ++++ M  +G  PD V+Y  ++G LC  +++     +++++
Sbjct: 149 AYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQL 208

Query: 308 VNDSNLFH------------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           + D+ +               +G I EA +L+ +M   G +PD+ TY A++ G C+ G +
Sbjct: 209 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 268

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           ++A +++  +   GC+P+ +SY   L    + GK  E  +++         PN +TYS++
Sbjct: 269 ERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 328

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +  L R G++ EA  V++ M++K   P     + LI +LC+EG++D A   M   ++ GC
Sbjct: 329 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 388

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             ++VN+ +++   C+ G+  +AL + + +      P+  +Y T+I AL   G    A  
Sbjct: 389 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 448

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
           ++  M+SKG+ P  +TY ++I   C+ G VE+ + LL+ M     +    +YN V+  LC
Sbjct: 449 MVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 508

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
               +++A  +  +++    + + +T  +L+E     G    A ++A  +F+R++I
Sbjct: 509 KVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 564



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 233/470 (49%), Gaps = 32/470 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y  D I+   +++     K  + A RV+ ++        P+ F+Y  ++  + +  ++  
Sbjct: 109 YTPDVILCTKLIKGFFNFKNIEKASRVMEILESH---TEPDVFAYNAVISGFCKVNQIEA 165

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  VL+ M+     P+++  N  I  L    KL  AL  L+++ L    P V+TY  LI+
Sbjct: 166 ATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIE 225

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
                  I +A+KL++EM  +G  PD  +Y  ++  +CKE                    
Sbjct: 226 ATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE-------------------- 265

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G +E A EL+  ++  GC PDV++Y  ++  F   G+ D+ +K++ +M+  GC+PN 
Sbjct: 266 ---GMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y+  ++ LC  G+  EA  ++    E+  TP+  +Y  ++  L +EG+L  A  ++  
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M+  G  P  V  N ++ +LC+ G  + A +   +    GC  NV ++ ++I      GD
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 442

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
              AL ++  M     DPD +TY ++I  L ++G VEEA  L+  M   G  PTV++Y  
Sbjct: 443 RSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 502

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEA 601
           V+   C+V R++D + +  +M+ K  CR   T Y  +IE +   G+  EA
Sbjct: 503 VLLGLCKVRRIDDAIGMFAEMIEK-GCRPNETTYILLIEGIGFAGWRTEA 551



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 192/419 (45%), Gaps = 12/419 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++    K    + A +VL  M  RG       ++ ++ +     KL  A+ VL
Sbjct: 146 DVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVL 205

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +      P ++     I   +V   + +A++ LE M   G+ P++ TYN +I+G C  
Sbjct: 206 DQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE 265

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VND 310
             ++ A +LI  +  KGC PD +SY  ++     + +  E   L+ +M         V  
Sbjct: 266 GMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTY 325

Query: 311 SNLFHDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           S L       GRI+EA  ++  M +    PD  +Y  +++  C+ G LD A  ++  M  
Sbjct: 326 SILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMIS 385

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +GC P+ V+Y   L  LC NG + +A E+ N        PN  +Y+ ++  L   G  S 
Sbjct: 386 NGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSR 445

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +V  M+ KG  P  +  N LI  LCR+G ++ A   + +    G    V+++  ++ 
Sbjct: 446 ALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLL 505

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           G C+   +++A+ +  +M      P+  TY  +I+ +   G   EA EL   + S+ ++
Sbjct: 506 GLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 564



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 178/342 (52%), Gaps = 4/342 (1%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PDV  Y AV++GFC+V +++ A ++L +M   G  P+ V+Y   +  LC+  K   A  +
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           ++    +   P  ITY++++     EG ++EA  ++ EM+ +G  P     N +I+ +C+
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           EG ++ A + +    +KGC  +V+++  L+R F  +G  +E   L+ +M+    +P+ VT
Sbjct: 265 EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y+ +I +L + GR++EA  ++  M+ K L P   +Y  +I   C+ GR++  + +++ M+
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384

Query: 577 SKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           S   C      YN ++  LC  G   +A +I  K+       + S+ + ++ +  + G  
Sbjct: 385 S-NGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 443

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
             A  +   M ++ + PD      +   L  +G  EEA  L+
Sbjct: 444 SRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLL 485



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 157/329 (47%), Gaps = 3/329 (0%)

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++N  C+ G+ +++   L+ + + G  P+ +  T  + G   N K++E    +    E  
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGF-FNFKNIEKASRVMEILESH 142

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P+   Y+ V+ G  +  ++  A  V+  M  +GF P  V  N++I SLC   K+  A 
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             + + L   C   V+ +T LI     +G + EA+ LL++M      PD  TY  II  +
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCR 582
            K G VE A EL+  + SKG  P V++Y  ++  +   G+ ++  KL+ +M S+  +  +
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             Y+ +I +LC FG ++EA  +L  ++      D  +   L+ +   +G   LA  +   
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           M +   +PD+     +   L   G + +A
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQA 411



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 123/269 (45%), Gaps = 38/269 (14%)

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L+   C+ GK + +  F++  +NKG   +V+  T LI+GF    ++E+A S + ++    
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA-SRVMEILESH 142

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ-------- 561
            +PD   Y  +I    K  ++E AT+++ +M ++G +P +VTY  +I   C         
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 562 ---------------------------VGRVEDLLKLLEKMLSKQKCRT--AYNQVIENL 592
                                       G + + +KLLE+ML++        YN +I  +
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G +E A +++  +     + D  + ++L+ ++LN+G      K+   MF+R   P+ 
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVER 681
                +   L   G+ +EA +++   +E+
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEK 351


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 231/455 (50%), Gaps = 25/455 (5%)

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A   L  M   G+ PN +T++ L+ G     +I DA+KL DEM   G  PD ++Y T++ 
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            LCK                        G    A +L+ +M + GC P+VV Y+ +++  
Sbjct: 91  GLCK-----------------------MGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+   + +A + L +M + G  PN V+Y++ L+G C+ G+S EA  +     E    P+ 
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDT 187

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           +T+++++ GL +EG + EA  V   M++KG  P     N L+   C + +MD A+K    
Sbjct: 188 VTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNI 247

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            + KGCA +V ++  LI+G C+ G ++EA  LL +M      PDTVTY+T++    ++GR
Sbjct: 248 MVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
            ++A +L+ +M S GL+P ++TY  V+   C+ G +++  +LL+ M     +     Y  
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTI 367

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I+ +C+FG LE A ++   +     + D  T  V++   L  G+   A ++   M    
Sbjct: 368 LIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHG 427

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +P+      + +  +  G +  A  L+   V RG
Sbjct: 428 CLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG 462



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 246/501 (49%), Gaps = 32/501 (6%)

Query: 175 RPEAFSYLMV----AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           RP+ ++  ++     +S       A  VL  M K  + PN +  +T ++ L    K+  A
Sbjct: 7   RPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDA 66

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           ++  + M   G  P+V+TY+ +I G C +     AI+L+ +M  KGC P+ V Y T++  
Sbjct: 67  VKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDS 126

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LCK+K I E  + + +MVN                        G  P+VVTY+++++GFC
Sbjct: 127 LCKDKLITEAMEFLSEMVNR-----------------------GISPNVVTYSSILHGFC 163

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
            +G  ++A  + +QM      P+TV++   ++GL   G  LEA+ +  T  E+   PN  
Sbjct: 164 NLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVN 223

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY+ +M G   + ++ EA  +   MV+KG  P+    N+LI+  C+ G++D AK  + E 
Sbjct: 224 TYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEM 283

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
            +K    + V +++L++GFCQ G  ++A  LL++M      PD +TY+ ++D L K G +
Sbjct: 284 SHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHL 343

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQV 588
           +EA EL+  M    + P +  Y  +I   C  G++E   +L   +  K  Q     Y  +
Sbjct: 344 DEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVM 403

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I  L   G   EA ++   +       ++ T +V+++ +L  G    A ++   M  R  
Sbjct: 404 ISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGF 463

Query: 649 IPDLKLCKKVSERLILEGKSE 669
             D    + +S+   LE + E
Sbjct: 464 SADSSTFQMLSD---LESRDE 481



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 215/424 (50%), Gaps = 12/424 (2%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + +  +L  LS       A ++   M + G E     +S ++    + G    A+ +L  
Sbjct: 48  VTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKK 107

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M++    PN+++ +T I  L     + +A+ FL  M   GI+PNV+TY+ ++ G+C+L R
Sbjct: 108 MEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGR 167

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDSNL 313
             +A  L  +M  +   PD V++  ++  L KE  I E + + E M        VN  N 
Sbjct: 168 SNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNA 227

Query: 314 FHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             D    Q +++EA++L N M + GC P V +Y  ++ G C+ G +D+AK +L +M H  
Sbjct: 228 LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA 287

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             P+TV+Y+  + G C +G+  +A++++         P+ +TYS+V+ GL ++G L EA 
Sbjct: 288 LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAF 347

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           ++++ M +    P      +LIQ +C  GK++ A++       KG   +VV +T +I G 
Sbjct: 348 ELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGL 407

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
            + G   EA  L  DM +    P++ TY  II    +NG    A  L+ +M+ +G     
Sbjct: 408 LKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADS 467

Query: 550 VTYR 553
            T++
Sbjct: 468 STFQ 471



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 219/431 (50%), Gaps = 12/431 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  M + G++     FS L+   S   K+ +A+ +   M K    P+++  +T I+
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L        A++ L++M+  G  PNV+ Y+ +I   C    I +A++ + EM  +G SP
Sbjct: 91  GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFH-------DQGRIEEAKELV 327
           + V+Y +++   C   R  E   L ++MV      D+  F+        +G I EA+ + 
Sbjct: 151 NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVF 210

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
             M + G  P+V TY A+++G+C   ++D+A+K+   M   GC P+  SY   + G C +
Sbjct: 211 ETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKS 270

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G+  EA+ ++     +  TP+ +TYS +M G  ++G+  +A  ++ EM   G  P  +  
Sbjct: 271 GRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTY 330

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           ++++  LC++G +D A + ++         N+  +T LI+G C  G LE A  L  ++++
Sbjct: 331 SIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFV 390

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD VTYT +I  L K G   EA EL   M   G +P   TY  +I  + + G   +
Sbjct: 391 KGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSN 450

Query: 568 LLKLLEKMLSK 578
             +L+E+M+ +
Sbjct: 451 AGRLIEEMVGR 461



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 221/441 (50%), Gaps = 31/441 (7%)

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKD----AIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
           M L+ I P+V T   LI  +C  H   D    A  ++  M   G  P+ V++ T++    
Sbjct: 1   MDLSNIRPDVYTLTILINCFC--HSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLL---- 54

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
                              N    + +I +A +L ++M +MG  PDV+TY+ ++NG C++
Sbjct: 55  -------------------NGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKM 95

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
           G    A ++L++M   GCKPN V Y+  ++ LC +    EA E ++       +PN +TY
Sbjct: 96  GSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTY 155

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           S ++HG    G+ +EA  + ++MV++   P  V  N+L+  L +EG +  A+   +  + 
Sbjct: 156 SSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIE 215

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           KG   NV  + +L+ G+C +  ++EA  L + M      P   +Y  +I    K+GR++E
Sbjct: 216 KGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDE 275

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIE 590
           A  L+ +M  K L P  VTY T++  +CQ GR +D  KLLE+M S         Y+ V++
Sbjct: 276 AKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLD 335

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC  G+L+EA ++L  +  +  + +     +L++   N G    A ++   +F + + P
Sbjct: 336 GLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQP 395

Query: 651 DLKLCKKVSERLILEGKSEEA 671
           D+     +   L+  G S EA
Sbjct: 396 DVVTYTVMISGLLKGGLSNEA 416



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 188/355 (52%), Gaps = 5/355 (1%)

Query: 337 PDVVTYTAVVNGFCRVGE--LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           PDV T T ++N FC         A  +L  M+  G +PN V+++  LNGL    K ++A 
Sbjct: 8   PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           ++ +   +  + P+ ITYS +++GL + G  + A  ++++M +KG  P  V  + +I SL
Sbjct: 68  KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C++  +  A +F+ E +N+G + NVV ++S++ GFC  G   EA SL   M      PDT
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDT 187

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VT+  ++D LSK G + EA  +   M+ KG+ P V TY  ++  YC   ++++  KL   
Sbjct: 188 VTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNI 247

Query: 575 MLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M+ K    +  +YN +I+  C  G ++EA  +L ++   A   D  T   L++ +   G 
Sbjct: 248 MVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
           P  A K+   M +  L+PDL     V + L  +G  +EA  L L+ ++   I+P 
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFEL-LKAMQESKIEPN 361



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 189/403 (46%), Gaps = 27/403 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +VY  +++ L K KL   A   L  M  RGI      +S ++  +   G+   A  +   
Sbjct: 118 VVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQ 177

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  V P+ +  N  +  L     + +A    E M   G+ PNV TYN L+ GYC   +
Sbjct: 178 MVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQ 237

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A KL + M  KGC+P   SY  ++   CK                        GRI+
Sbjct: 238 MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCK-----------------------SGRID 274

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EAK L+ +MS     PD VTY+ ++ GFC+ G    A+K+L++M  +G  P+ ++Y+  L
Sbjct: 275 EAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVL 334

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +GLC  G   EA E++   +E    PN   Y++++ G+   GKL  A ++   +  KG  
Sbjct: 335 DGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQ 394

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V   ++I  L + G  + A +  ++    GC  N   +  +I+GF + GD   A  L
Sbjct: 395 PDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRL 454

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +++M       D+ T+  + D  S+    +E   L M   S+G
Sbjct: 455 IEEMVGRGFSADSSTFQMLSDLESR----DEIISLFMHGSSQG 493



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 149/301 (49%), Gaps = 23/301 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + + ++++ LSK  +   A+ V   M  +G+E     ++ LM  Y    ++  A  + 
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           ++M +   AP++   N  I       ++ +A   L  M    +TP+ +TY+ L+KG+C  
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R +DA KL++EM   G  PD ++Y  V+  LCK                       QG 
Sbjct: 306 GRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCK-----------------------QGH 342

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++EA EL+  M +    P++  YT ++ G C  G+L+ A+++   ++  G +P+ V+YT 
Sbjct: 343 LDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTV 402

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++GL   G S EA E+          PN+ TY+V++ G  R G  S A  ++ EMV +G
Sbjct: 403 MISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG 462

Query: 440 F 440
           F
Sbjct: 463 F 463


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 252/487 (51%), Gaps = 36/487 (7%)

Query: 148 LEILSKTKLCQGAKRVLRLMARR----GIECRPEAFSY--LMVAYSRAGKLRNAMYVLSM 201
           +++ +   L  G  R  RL A R     +   P+A++Y  L+      G++ +A+ +L  
Sbjct: 103 VDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDD 162

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +    P+++     +  +   +   +A++ L+ M+  G TPN++TYN +I G C   R
Sbjct: 163 MLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDR 222

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + DA ++++ +   G  PD VSY TV+  LC  KR ++V  L  +MV ++          
Sbjct: 223 VDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENN---------- 272

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
                        C+P+ VT+  +V  FCR G +++A ++L +M  HGC  NT      +
Sbjct: 273 -------------CVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVI 319

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           N +C  G+  +A E +N       +P+ I+Y+ V+ GL R G+  +A +++ EMV+K   
Sbjct: 320 NSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCP 379

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N  I  LC++G +D A   +++    GC+V +V + +L+ GFC +G ++ AL L
Sbjct: 380 PNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALEL 439

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            + +     +P+T+TYTT++  L    R++ A EL+ +M+       VVT+  ++  +CQ
Sbjct: 440 FNSL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQ 496

Query: 562 VGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
            G VE+ ++L+++M+ +  C      +N +++ +      EEA ++L  ++      D  
Sbjct: 497 KGFVEEAIELVQQMM-EHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTI 555

Query: 619 TCHVLVE 625
           T   +V+
Sbjct: 556 TYSSIVD 562



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 244/487 (50%), Gaps = 16/487 (3%)

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
           AP++ +C   I  L    + + A R L   + +G   +V  YN L+ GYC   R+  A +
Sbjct: 67  APDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARR 126

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFH--- 315
           LI  MP+    PD  +Y  ++  LC   R+ +   L++ M         V  + L     
Sbjct: 127 LIASMPVP---PDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVC 183

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
                 +A +++++M   GC P++VTY  ++NG CR   +D A+++L ++  +G +P+TV
Sbjct: 184 KSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTV 243

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           SYT  L GLC   +  +   +     E    PN +T+ +++    R G +  A +V+  M
Sbjct: 244 SYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRM 303

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            + G        N++I S+C++G++D A +F+    + GC+ + +++T++++G C+ G  
Sbjct: 304 SEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRW 363

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           E+A  LL++M      P+ VT+ T I  L + G +++A  L+ +M   G    +VTY  +
Sbjct: 364 EDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNAL 423

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
           ++ +C  GRV+  L+L   +  +    T Y  ++  LC    L+ A ++L ++++     
Sbjct: 424 VNGFCVQGRVDSALELFNSLPCEPNTIT-YTTLLTGLCHAERLDAAAELLAEMMQNDCPL 482

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           +  T +VLV  +  KG    A ++  +M      P+L     + + +  +  SEEA  L+
Sbjct: 483 NVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELL 542

Query: 676 LRFVERG 682
              V +G
Sbjct: 543 HGLVSKG 549



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 202/425 (47%), Gaps = 15/425 (3%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
            + ++ D + Y  +L+ L   K  +  + +   M           F  L+  + R G + 
Sbjct: 235 SYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVE 294

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A+ VL  M +     N  +CN  I+ +    ++  A  FL  M   G +P+ ++Y  ++
Sbjct: 295 RAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVL 354

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-- 311
           KG C   R +DA +L++EM  K C P++V++ T +  LC++  I +   L+E+M      
Sbjct: 355 KGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCS 414

Query: 312 ----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                     N F  QGR++ A EL N +    C P+ +TYT ++ G C    LD A ++
Sbjct: 415 VGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAEL 471

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L +M  + C  N V++   ++  C  G   EA E++    E   TPN IT++ ++ G+  
Sbjct: 472 LAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITE 531

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           +    EA +++  +V KG     +  + ++  L RE +++ A +      + G     V 
Sbjct: 532 DCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVM 591

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +  ++   C++ + + A+     M      P+  TY  +I+ L++ G ++EA  ++ ++ 
Sbjct: 592 YNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELC 651

Query: 542 SKGLV 546
           S+G++
Sbjct: 652 SRGVL 656


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 243/510 (47%), Gaps = 16/510 (3%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           Q R     I +  +   ++KTK  +    + + M  +GI       S ++  + R  KL 
Sbjct: 81  QSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLS 140

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A   +  + K    P+ +I NT ++ L +  ++++AL  ++RM   G  P ++T N L+
Sbjct: 141 YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLV 200

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            G C   ++ DA+ LID M   G  P++V+Y  V+  +CK  +     +L+ KM  + N+
Sbjct: 201 NGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM-EERNI 259

Query: 314 FHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
             D              G ++ A  L N+M   G   D++TY  ++ GFC  G  D   K
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L+ M      PN V+++  ++     GK  EA +++    +    PN ITY+ ++ G  
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +E +L EA  +V  M+ KG  P  +  N+LI   C+  ++D   +  +E   +G   N V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +L++GFCQ G LE A  L  +M   +  PD V+Y  ++D L  NG +E+A E+  K+
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYL 598
               +   +  Y  +IH  C   +V+D   L   +  K  +    AYN +I  LC    L
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYL 628
            +A  +  K+       D  T ++L+ ++L
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHL 589



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 261/533 (48%), Gaps = 53/533 (9%)

Query: 169 RRGIECRPEA----FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           R  I+ RP      F+ L  A ++  +    + +   M+   +A ++   +  I+     
Sbjct: 77  RDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRC 136

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            KL+ A   + ++   G  P+ + +N L+ G C   R+ +A++L+D M   G  P  ++ 
Sbjct: 137 RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITL 196

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            T++  LC                         G++ +A  L+++M + G  P+ VTY  
Sbjct: 197 NTLVNGLCL-----------------------NGKVSDAVVLIDRMVETGFQPNEVTYGP 233

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           V+N  C+ G+   A ++L++M     K + V Y+  ++GLC +G    A  + N  E + 
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
           +  + ITY+ ++ G    G+  +   ++R+M+K+   P  V  ++LI S  +EGK+  A 
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           + ++E + +G A N + + SLI GFC++  LEEA+ ++D M     DPD +T+  +I+  
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR-- 582
            K  R+++  EL  +M  +G++   VTY T++  +CQ G++E   KL ++M+S+ + R  
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR-RVRPD 472

Query: 583 -TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK----------- 630
             +Y  +++ LC  G LE+A +I GK+ ++  + D     +++    N            
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
            +PL   K+  R +N   I   +LC+K S          +AD L  +  E GH
Sbjct: 533 SLPLKGVKLDARAYN---IMISELCRKDS--------LSKADILFRKMTEEGH 574



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 186/386 (48%), Gaps = 23/386 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++++ L K      A  +   M  +G +     ++ L+  +  AG+  +   +L
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M K  ++PN++  +  I   V   KL +A + L+ M   GI PN +TYN LI G+C  
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           +R+++AI+++D M  KGC PD +++  ++   CK                         R
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK-----------------------ANR 418

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           I++  EL  +MS  G I + VTY  +V GFC+ G+L+ AKK+ Q+M     +P+ VSY  
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L+GLC NG+  +A E+    E+     +   Y +++HG+    K+ +A D+   +  KG
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
                   N++I  LCR+  +  A    ++   +G A + + +  LIR      D   A 
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALS 525
            L+++M       D  T   +I+ LS
Sbjct: 599 ELIEEMKSSGFPADVSTVKMVINMLS 624



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 146/329 (44%), Gaps = 2/329 (0%)

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D A  + + M      P  + +    + +    +      +    E +    +  T S++
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           ++   R  KLS A   + +++K G+ P  V  N L+  LC E ++  A + +   +  G 
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
              ++   +L+ G C  G + +A+ L+D M      P+ VTY  +++ + K+G+   A E
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
           L+ KM  + +    V Y  +I   C+ G +++   L  +M  K  +     YN +I   C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
           + G  ++  K+L  +++     +  T  VL++S++ +G    A ++   M  R + P+  
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369

Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERG 682
               + +    E + EEA  ++   + +G
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKG 398



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/346 (20%), Positives = 132/346 (38%), Gaps = 82/346 (23%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           ++ D I Y  ++             ++LR M +R I      FS L+ ++ + GKLR A 
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M +  +APN +  N+ I      N+L +A++ ++ M   G  P+++T+N LI GY
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413

Query: 257 CDLHRIKDAI-----------------------------------KLIDEMPLKGCSPDK 281
           C  +RI D +                                   KL  EM  +   PD 
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKM------------------------VNDS-NLFHD 316
           VSY  ++  LC    +++  ++  K+                        V+D+ +LF  
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533

Query: 317 ----------------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
                                 +  + +A  L  +M++ G  PD +TY  ++       +
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
              A +++++M   G   +  +    +N L          +M++T+
Sbjct: 594 ATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTT 639


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 215/393 (54%), Gaps = 25/393 (6%)

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M+  G  P+V++Y+ +I GYC    ++  +KLI EM +KG  P+  +Y +++  LCK   
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCK--- 57

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                                G++++A+ ++ +M   G +PD V YT +++GFC++G + 
Sbjct: 58  --------------------SGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQ 97

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
            A K+  +M      P+ ++YTA + GLC  GK +EA ++ N        P+ +TY+ ++
Sbjct: 98  AAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLI 157

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            G  + G++ +A  +  +MV+ G  P  V    L   LC+ G++D A + + E   KG  
Sbjct: 158 DGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQ 217

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
           +N+  + SL+ G C+ G++ +A+ L+++M +    PDT+T+TT++DA  K G + +A EL
Sbjct: 218 LNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHEL 277

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCS 594
           + +ML +GL PTV+T+  +++ +C  G +ED  +LL  ML K      T YN +++  C 
Sbjct: 278 LREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCI 337

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
              +    +I   +       D++T ++L++ +
Sbjct: 338 RNNMRCTTEIYKGMCARGVMPDSNTYNILIKGH 370



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 226/460 (49%), Gaps = 27/460 (5%)

Query: 176 PEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+  SY  V   Y   G+L+  + ++  MQ   + PNL   N+ I +L    K+  A R 
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           L  M   GI P+ + Y  LI G+C L  I+ A KL DEM  +   PD ++Y  V+  LC+
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 294 EKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
                                   G++ EA ++ N+M   G  PD VTYT +++G+C+ G
Sbjct: 128 -----------------------CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSG 164

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           E+++A  +  QM   G  PN V+YTA  +GLC  G+   A E+++    +    N  TY+
Sbjct: 165 EMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYN 224

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            +++GL + G + +A  ++ EM   G +P  +    L+ + C+ G+M  A + ++E L++
Sbjct: 225 SLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDR 284

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G    V+ F  L+ GFC  G LE+   LL  M      P+T TY +++        +   
Sbjct: 285 GLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCT 344

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIEN 591
           TE+   M ++G++P   TY  +I  +C+   +++   L ++M  K    TA  YN +I+ 
Sbjct: 345 TEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKG 404

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
                 + EA ++  ++ R    ADA   ++ V+    +G
Sbjct: 405 FFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEG 444



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 188/406 (46%), Gaps = 12/406 (2%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  ++ +L K+     A+RVLR M  +GI      ++ L+  + + G ++ A  +   M
Sbjct: 47  TYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEM 106

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
           +K  + P+ +     I  L    K+ +A +   +M   G+ P+ +TY  LI GYC    +
Sbjct: 107 EKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEM 166

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----------- 311
           + A  L ++M   G +P+ V+Y  +   LCK  ++    +L+ +M               
Sbjct: 167 EKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSL 226

Query: 312 -NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            N     G I +A +L+ +M   G  PD +T+T +++ +C+ GE+ +A ++L++M   G 
Sbjct: 227 VNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGL 286

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P  +++   +NG C +G   +   ++    E+   PN  TY+ +M        +    +
Sbjct: 287 QPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTE 346

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           + + M  +G  P     N+LI+  C+   M  A    +E   KG  +   ++ S+I+GF 
Sbjct: 347 IYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFF 406

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
           +K  + EA  L ++M       D   Y   +D     G +E A EL
Sbjct: 407 KKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALEL 452



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 175/383 (45%), Gaps = 24/383 (6%)

Query: 122 RVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           + A + F   ++Q R   D I Y  ++  L +      A +V   M  RG+E     ++ 
Sbjct: 97  QAAYKLFDEMEKQ-RIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTT 155

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+  Y ++G++  A  + + M ++ + PN++        L    ++  A   L  M   G
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG 215

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           +  N+ TYN L+ G C    I+ A+KL++EM + G  PD +++ T+M   CK        
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCK-------- 267

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                           G + +A EL+ +M   G  P V+T+  ++NGFC  G L+  +++
Sbjct: 268 ---------------TGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERL 312

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L  M   G  PNT +Y + +   C         E+          P++ TY++++ G  +
Sbjct: 313 LAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCK 372

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
              + EA  + +EM +KGF  T    N +I+   ++ K+  A++  +E   +G A +   
Sbjct: 373 ARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEI 432

Query: 482 FTSLIRGFCQKGDLEEALSLLDD 504
           +   +     +G++E AL L D+
Sbjct: 433 YNLFVDISYGEGNMETALELCDE 455


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 228/452 (50%), Gaps = 34/452 (7%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           RAG+   A   + + ++    PN     + IH L    KL +A   L+ M+  GI P V 
Sbjct: 10  RAGQHGQA---VQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVA 66

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            +N +I+G C   R  DA+     +    C+PD +++  ++  L K  R++E   + E M
Sbjct: 67  VHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESM 126

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
              S                       C+P+VVTYT V+NG C+ G+LD+A ++L  M  
Sbjct: 127 HTSSQ----------------------CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNE 164

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC PN ++Y+  + GLC  G++ +   ++       + P+ I Y+ +++GL +  +L E
Sbjct: 165 TGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDE 224

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A ++V+ M++ G +PT V  N L++  CR  ++D A + +Q    +GC  +V+N+ ++I 
Sbjct: 225 ALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIA 284

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV------EEATELMMKML 541
           G C+   L++A +LL  M   +  PD +TY+TIID L K+ RV      E A E++  M 
Sbjct: 285 GLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMK 344

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLE 599
             G  P   TY  VI   C+  + +  L LL +M+  +     ++++ VI +LC    L+
Sbjct: 345 QTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLD 404

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            A KI G +     K +      L++  L+KG
Sbjct: 405 AAYKIFGMMSERECKPNPVAYAALIDG-LSKG 435



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 253/547 (46%), Gaps = 61/547 (11%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGI----------- 172
           A+Q F    R+ R   +   Y  ++  L K      A  +L  M  RGI           
Sbjct: 17  AVQLF----REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVI 72

Query: 173 ----------------------ECRPE--AFSYLMVAYSRAGKLRNAMYVL-SMMQKAAV 207
                                 +C P+   F+ L+ A  ++G++  A  +  SM   +  
Sbjct: 73  RGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQC 132

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
            PN++   T I+ L    KL +A+  L+ M   G  PNV+TY+ L++G C   R      
Sbjct: 133 LPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFT 192

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFH 315
           L+ EM  +G  PD + Y T++  LCK +R+ E  +L++ M+                LF 
Sbjct: 193 LLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFC 252

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
              +++ A  L+  MS+ GC PDV+ Y  V+ G CR   LD A+ +L+QM    C P+ +
Sbjct: 253 RSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVI 312

Query: 376 SYTAFLNGLCHNGK-----SLEAR-EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
           +Y+  ++GLC + +      LEA  E++   ++    PNA TY+VV+ GL R  K  +A 
Sbjct: 313 TYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQAL 372

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            ++R M+     P     +++I SLC+   +D A K       + C  N V + +LI G 
Sbjct: 373 ALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGL 432

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
            + G++++A+ + + M    + P   TY +++D L   GR+EEA  ++  M+ K   P  
Sbjct: 433 SKGGEVDKAVRVFELMVESFR-PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDG 491

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGK 607
            +Y  +I   C+V  VE+  +L + + +K        YN ++  LC    L +A  +  K
Sbjct: 492 ASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANK 551

Query: 608 VLRTASK 614
           ++    K
Sbjct: 552 LIEAGYK 558



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 237/516 (45%), Gaps = 61/516 (11%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P  F+Y  L+    +AGKL  A  +L  M+   + P + + N  I  L    +   AL
Sbjct: 26  CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDAL 85

Query: 232 RFLERMQLAGITPNVLTYNCL------------------------------------IKG 255
            + + +     TP+++T+N L                                    I G
Sbjct: 86  GYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVING 145

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---- 311
            C   ++  AI+L+D M   GC P+ ++Y  ++  LCK  R  +   L+++M        
Sbjct: 146 LCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPD 205

Query: 312 --------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   N      R++EA ELV  M + GC P VVTY +++  FCR  ++D+A +++Q
Sbjct: 206 VIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ 265

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR-- 421
            M   GC P+ ++Y   + GLC + +  +A+ ++         P+ ITYS ++ GL +  
Sbjct: 266 VMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDW 325

Query: 422 ----EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
               + KL  AC+++  M + G  P      ++I+ LCR  K   A   ++  ++     
Sbjct: 326 RVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVP 385

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           ++ +F+ +I   C+  DL+ A  +   M   +  P+ V Y  +ID LSK G V++A  + 
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV- 444

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCS 594
            +++ +   P V TY +V+   C VGR+E+ ++++E M+ K+ C     +Y  +I  LC 
Sbjct: 445 FELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKE-CFPDGASYGALIRGLCR 503

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
              +EEA ++   V       +    +VLV     K
Sbjct: 504 VSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKK 539


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 162/607 (26%), Positives = 290/607 (47%), Gaps = 56/607 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  +L  L+K   C+ A+ +   +  +  +  P+  SY  L+ +  RAGK   A+ V+
Sbjct: 10  VTYNSLLNALAKAGQCEEAQLLFEEL--KAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + MQ     PNL   NT +  L    +  +ALR L  M+  G  P+V TYNCLI      
Sbjct: 68  AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------------ 307
            R+ +A  L  EM  +GC PD  +Y +++  L K  R ++  +L+E+M            
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187

Query: 308 -------------VNDSNLFHD----------------------QGRIEEAKELVNQMSQ 332
                        V    LF +                       GR+++A EL+++M +
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G  P VVTY A++ GF +VG+L +A  +L +M  +GCKP+ V+Y+  + GL    +  E
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDE 307

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A +++   E+E   P+ ITY+ +++GL + G L++A  +   M  KG  P  V  + LI 
Sbjct: 308 ACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLIT 367

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           +L +  +++ A    +E  + G   ++  + S+I    + G +++A  L  +M      P
Sbjct: 368 ALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSP 427

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D +TY   +++L + GR +EA ++   M   GL+P V TY  ++    +   V+D   LL
Sbjct: 428 DVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLL 487

Query: 573 EKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
           ++++ +Q C      +++ +E L S+G ++EA ++L           AS+ + L+++   
Sbjct: 488 KELI-EQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAK 546

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG-HIQPKS 688
            G    A+     +  +   PD+     +   L   G+ + A  L+    +RG  + P+S
Sbjct: 547 AGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRS 606

Query: 689 EEHLQRQ 695
             +L R+
Sbjct: 607 YSNLVRK 613



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 241/516 (46%), Gaps = 60/516 (11%)

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           K   +PN++  N+ ++ L    +  +A    E ++ A  TP+V++Y+CLI       + +
Sbjct: 2   KGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWE 61

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
            A++++ EM  KGC P+  +Y T++  L K                        G+ +EA
Sbjct: 62  AALEVVAEMQAKGCKPNLWTYNTLVDCLGK-----------------------AGQFDEA 98

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
             L+ +M   GC+PDV TY  +++   + G L +A  +  +M   GC P+T +Y + + G
Sbjct: 99  LRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYG 158

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           L   G+S +A E++   E     P+ +TYS ++ GL ++G+  +A  + +EM ++G  P 
Sbjct: 159 LGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPD 218

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            +    L+ +L + G++D A + + E   +G    VV + +LI GF + GDL EA +LLD
Sbjct: 219 SITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLD 278

Query: 504 DMYL--CKKD---------------------------------PDTVTYTTIIDALSKNG 528
           +M    CK D                                 PDT+TY T+I+ L K G
Sbjct: 279 EMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAG 338

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYN 586
            + +A  L  +M SKG  P VVTY T+I    +  RVE    L E+M  +  Q     Y 
Sbjct: 339 LLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYC 398

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I  L   G +++A ++  ++       D  T +  + S    G    A K+   M   
Sbjct: 399 SIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKES 458

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            L+PD+     +   L    + ++A  L+   +E+G
Sbjct: 459 GLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 178/413 (43%), Gaps = 83/413 (20%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A + F    R+ R + D I +  +++ L K      A  +L  M  RG++     ++ L+
Sbjct: 203 AFKLFQEMKRRGR-KPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALI 261

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             + + G L  A  +L  M++    P+++  +  I  L+  ++L +A + L++M+  G  
Sbjct: 262 AGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCP 321

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+ +TYN LI G      + DA +L D M  KGC+PD V+Y T++  L K  R++    L
Sbjct: 322 PDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVL 381

Query: 304 MEKM------------------------VNDSN-LFHDQ--------------------- 317
            E+M                        V+D++ LF +                      
Sbjct: 382 FEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGR 441

Query: 318 -GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV------------------------ 352
            GR +EA+++   M + G +PDV TY A++ G  +                         
Sbjct: 442 GGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLK 501

Query: 353 -----------GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
                      G +D+A ++LQ     G  P   SY A ++ L   G+  EA   +   +
Sbjct: 502 FDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLK 561

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E+   P+ ++YS ++  L + G++  A +++ EM K+G   +P   + L++ L
Sbjct: 562 EQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 137/298 (45%), Gaps = 16/298 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D I Y  ++  L K  L   A R+   M  +G  C P+  +Y  L+ A  +A ++ +A  
Sbjct: 323 DTITYNTLINGLGKAGLLNDAGRLFDRMKSKG--CNPDVVTYSTLITALGKAARVESACV 380

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M+   + P+L    + I VL    ++  A R    M+  G++P+V+TYN  +    
Sbjct: 381 LFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLG 440

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD- 316
              R K+A K+ ++M   G  PD  +Y  ++  L K K + +   L+++++     F   
Sbjct: 441 RGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSL 500

Query: 317 -----------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                       G ++EA EL+   +  G  P   +Y A+++   + G + +A   L+ +
Sbjct: 501 KFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDL 560

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
              G KP+ VSY++ ++ L   G+   A E++    +     +  +YS ++  L+  G
Sbjct: 561 KEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 152/549 (27%), Positives = 267/549 (48%), Gaps = 31/549 (5%)

Query: 138 RHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           RH P  I +  +L  L+K K    A  + + M  +GI       + L+  +   G++  +
Sbjct: 5   RHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFS 64

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             VL  + K    P+ +  NT +  L +  ++ K+L F +++   G   + ++Y  L+ G
Sbjct: 65  FSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNG 124

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
            C +   + A+KL+  +  +   P+ V Y T++  LCK+K + E  DL            
Sbjct: 125 LCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDL------------ 172

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
                       ++M   G  PD +TYT ++ GFC +G+L  A  +L +M      P   
Sbjct: 173 -----------YSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVY 221

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            Y   +N LC  G   EA+ ++    +E   P  +TYS +M G    G++  A  +   M
Sbjct: 222 IYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAM 281

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           V+ G  P     N++I  LC+  ++D A   ++E L+K    + V + SLI G C+ G +
Sbjct: 282 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 341

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
             AL+L+++M+   +  D VTYT+++DAL KN  +++AT L MKM  +G+ PT+ TY  +
Sbjct: 342 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 401

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I   C+ GR+++  +L + +L K  C     Y  +I  LC  G  +EA  I  K+     
Sbjct: 402 IDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 461

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             +A T  +++ S   K     A K+   M  + L   L L  KV++ + ++ ++++A+ 
Sbjct: 462 IPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL---LVLDFKVAD-VFVQNENDKAEK 517

Query: 674 LMLRFVERG 682
           L+   + +G
Sbjct: 518 LLHEMIAKG 526



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 200/412 (48%), Gaps = 27/412 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA-GKLRNA 195
           ++ D + Y  +L  L K    + A ++LR++  R    RP    Y  +       KL N 
Sbjct: 111 FQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDR--STRPNVVMYNTIIDGLCKDKLVNE 168

Query: 196 MYVL-SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
            Y L S M    + P+ +   T I+   +  +L  A   L+ M L  I P V  YN LI 
Sbjct: 169 AYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILIN 228

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
             C    +K+A  L+  M  +G  P  V+Y T+M   C                      
Sbjct: 229 ALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCL--------------------- 267

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G ++ AK++ + M QMG  P+V +Y  ++NG C+   +D+A  +L++M H    P+T
Sbjct: 268 --VGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDT 325

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y + ++GLC +G+   A  ++N         + +TY+ ++  L +   L +A  +  +
Sbjct: 326 VTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 385

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M ++G  PT      LI  LC+ G++  A++  Q  L KGC ++V  +T +I G C++G 
Sbjct: 386 MKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGM 445

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            +EAL++   M      P+ VT+  II +L +    ++A +L+ +M++KGL+
Sbjct: 446 FDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 261/518 (50%), Gaps = 22/518 (4%)

Query: 131 ADRQW-RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           +  +W  Y+   + +Y ++E  S +      +++L  M         ++F  +  AY +A
Sbjct: 54  SSHKWGSYKLGDLSFYSLIENFSNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKA 113

Query: 190 GKLRNAMYVLSMM-QKAAVAPNLLICNTAIHVLVVGNKLAKALRF----LERMQLAGITP 244
              + A+ +   M  +      +   NT ++V++       AL F    ++    + I P
Sbjct: 114 HLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQP 173

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           N L++N +IK  C +  +  A+++   M  + C  D  +Y T+M  LC E RI E   L+
Sbjct: 174 NGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLL 233

Query: 305 EKMVNDSNLFHD------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           ++M  +    +             +G +  A +LV+ M   GC+P+ VTY ++V+G C  
Sbjct: 234 DEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLK 293

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
           G+LD+A  +L +M  + C PN +++   ++G   +G++L+   ++ + EE+ +  N  +Y
Sbjct: 294 GKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSY 353

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           S ++ GL +EGK      + +EMV+KG  P  +  + LI  LCREGK D AK+++ E  N
Sbjct: 354 SSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKN 413

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           KG   N   ++SL+ G+ + GD+ +A+ +  +M     +   V Y+ +I+ L KNG+++E
Sbjct: 414 KGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKE 473

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK----QKCRTAYNQV 588
           A  +  +MLS+G+   VV Y ++IH +C    VE  +KL  +ML      Q     YN +
Sbjct: 474 ALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNIL 533

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           +   C+   +  A  IL  +L      D  TC + +++
Sbjct: 534 LNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKT 571



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 205/463 (44%), Gaps = 72/463 (15%)

Query: 175 RPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           +P   S+ +V  A  R G +  A+ V   M       +    +T +H L    ++ +A+ 
Sbjct: 172 QPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVS 231

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
            L+ MQ+ G  PN + +N LI   C    +  A KL+D M LKGC P++V+Y +++  LC
Sbjct: 232 LLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLC 291

Query: 293 KEKRIKEVRDLMEKMV------NDSNL------FHDQGRIEEAKELVNQMSQMGCIPDVV 340
            + ++ +   L+ +MV      ND         F   GR  +   ++  + + G   +  
Sbjct: 292 LKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEF 351

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           +Y+++++G  + G+ +   ++ ++M   GCKPNT+ Y+A ++GLC  GK  EA+E +   
Sbjct: 352 SYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEM 411

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           + +  TPN+ TYS +M G    G + +A  V +EM         V  ++LI  LC+ GK+
Sbjct: 412 KNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKL 471

Query: 461 DGAKKFMQECLNKGCAVNVVNFTS------------------------------------ 484
             A    ++ L++G  ++VV ++S                                    
Sbjct: 472 KEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYN 531

Query: 485 -LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN---------------- 527
            L+  FC K  +  A+ +L+ M     DPD +T    +  L  N                
Sbjct: 532 ILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVV 591

Query: 528 -----GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 R   A+ ++  ML K L+P   T+   + + C+  +V
Sbjct: 592 RLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCKPMKV 634



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 137/280 (48%), Gaps = 8/280 (2%)

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFF----PTPVEINLLIQSLCREGKMDGAKKF 466
           +++ V++ + +EG    A +    ++    F    P  +  NL+I++LCR G +D A + 
Sbjct: 138 SFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEV 197

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +   ++ C  +   +++L+ G C +G ++EA+SLLD+M +    P+ V +  +I AL K
Sbjct: 198 FRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCK 257

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RT 583
            G +  A++L+  M  KG VP  VTY +++H  C  G+++  + LL +M++  KC     
Sbjct: 258 KGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVA-NKCVPNDI 316

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            +  +++     G   +  ++L  +     + +  +   L+     +G      ++   M
Sbjct: 317 TFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEM 376

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
             +   P+  +   + + L  EGK +EA   ++    +GH
Sbjct: 377 VEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGH 416



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 149/329 (45%), Gaps = 33/329 (10%)

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           RVL  +  +G      ++S L+    + GK  + M +   M +    PN ++ +  I  L
Sbjct: 336 RVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGL 395

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
               K  +A  +L  M+  G TPN  TY+ L+ GY +   I  AI +  EM    C+  +
Sbjct: 396 CREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHE 455

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFH---DQGRIEEAKELVNQ 329
           V Y  ++  LCK  ++KE   + ++M         V  S++ H   +   +E+  +L NQ
Sbjct: 456 VCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQ 515

Query: 330 M--SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           M        PDVVTY  ++N FC    + +A  +L  M   GC P+ ++   FL  L  N
Sbjct: 516 MLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDN 575

Query: 388 -GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
                + RE ++               +V+  ++R+  +  A +++  M++K   P P  
Sbjct: 576 MDPPQDGREFLD--------------ELVVRLIKRQRTVG-ASNIIEVMLQKFLLPKPST 620

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGC 475
             L +Q LC+  K+   +K + EC ++ C
Sbjct: 621 WALAVQQLCKPMKV---RKTISECQSRMC 646



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 6/215 (2%)

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALS----LLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           C   V +F +++    Q+G  + AL     ++D        P+ +++  +I AL + G V
Sbjct: 132 CKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNV 191

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQV 588
           ++A E+   M  +  V    TY T++H  C  GR+++ + LL++M  +       A+N +
Sbjct: 192 DQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVL 251

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I  LC  G L  A K++  +       +  T + LV     KG    A  +  RM     
Sbjct: 252 ISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKC 311

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +P+      + +  +  G++ +   +++   E+G+
Sbjct: 312 VPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGY 346



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 98/209 (46%), Gaps = 13/209 (6%)

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDM---YLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +F  + + + +    ++AL L   M   + CK+     ++ T+++ + + G  + A E  
Sbjct: 102 SFIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQT--VKSFNTVLNVVIQEGCFDLALEFY 159

Query: 538 MKMLSKG----LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIE 590
             ++       + P  +++  VI   C+VG V+  +++   M S + C      Y+ ++ 
Sbjct: 160 NHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGM-SDRNCVADGYTYSTLMH 218

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC+ G ++EA  +L ++    +  +    +VL+ +   KG    A K+   MF +  +P
Sbjct: 219 GLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVP 278

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFV 679
           +      +   L L+GK ++A +L+ R V
Sbjct: 279 NEVTYNSLVHGLCLKGKLDKAMSLLNRMV 307


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 154/590 (26%), Positives = 282/590 (47%), Gaps = 52/590 (8%)

Query: 105 SLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           SL P+ + AVL+ Q D   AL+ F    R+  ++H  + Y  +++ L         + VL
Sbjct: 4   SLLPKHVAAVLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVL 63

Query: 165 RLMARRGIECRPEAFSYL--MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
               R  I+       Y+  M +Y R GK++ A+ V   M      P++L  N  +++LV
Sbjct: 64  A-ETRMDIDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILV 122

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
                 +A +   RM+  GI P+V T+   IK +C   R   A++L++ M  +GC  + V
Sbjct: 123 ESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAV 182

Query: 283 SYYTVM-GY----------------------------------LCKEKRIKEVRDLMEKM 307
           +Y TV+ G+                                  LCK+  ++E   L+ K+
Sbjct: 183 AYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKV 242

Query: 308 VND---SNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           +     SNLF           +G +  A  +++ + + G  PDVVTY  ++ G C+   +
Sbjct: 243 LKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNV 302

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
            +A+K L ++ + G +P+  +Y   ++G C  G    A +++  +  + + P+  TY  +
Sbjct: 303 VEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSL 362

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           ++GL +  ++  A  +    + KG  PT +  N+LI+ LC+EG +  A + M E    GC
Sbjct: 363 INGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGC 422

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
           + ++  +  +I G C+ G + +A +L++D       PD  T+ T+ID   K  ++E   +
Sbjct: 423 SSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQ 482

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLC 593
           ++ KM S G+ P V+TY +V++   +  + EDL++  E M+ K     +  YN + E+LC
Sbjct: 483 ILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLC 542

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
             G + EA  ++ ++L      D  +   ++  + N G    AY++  RM
Sbjct: 543 KAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM 592



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 270/560 (48%), Gaps = 34/560 (6%)

Query: 112 CAVLRSQADERVALQFFYWADRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMAR 169
           C V+    +E   ++ +   +   R    P V  +  +L  L K    Q ++R+L  + +
Sbjct: 185 CTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLK 244

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           +G+      F+  +    R G L  AM +L  + +  + P+++  NT I  L   + + +
Sbjct: 245 KGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVE 304

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A ++L ++   G+ P+  TYN LI GYC +  +++A K++     KG  PD+ +Y +++ 
Sbjct: 305 AEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLIN 364

Query: 290 YLCKEKRIKEVRDL----MEKMVNDSNLFHD--------QGRIEEAKELVNQMSQMGCIP 337
            LC+   I     L    + K +  + + ++        +G I +A +++N+MS+ GC  
Sbjct: 365 GLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSS 424

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D+ TY  V+NG C++G +  A  ++      G  P+  ++   ++G C   K     +++
Sbjct: 425 DIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQIL 484

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           N       TP+ ITY+ V++GL +  K  +  +    MV+KG  P  +  N+L +SLC+ 
Sbjct: 485 NKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKA 544

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM---YLCKKDPDT 514
           GK++ A   + E LNKG   + V+F ++I GF   GDL+ A  L   M   Y  K    T
Sbjct: 545 GKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQY--KVSHTT 602

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            TY  +I+A ++   +    +L ++M + G  P   TYR +I  +C  G  +   K L +
Sbjct: 603 ATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLE 662

Query: 575 MLSKQ--KCRTAYNQVIENLCSFGYLEEA---------GKILGKVLRTASKAD---ASTC 620
           M+ K      T + +VI  LC    + EA           I+ +V+ + S+AD    +  
Sbjct: 663 MIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVNSISEADKKVVAAP 722

Query: 621 HVLVESYLNKG-IPLLAYKV 639
            ++VE  L +  I   AY++
Sbjct: 723 KIVVEDLLKRSCITYYAYEL 742



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/551 (24%), Positives = 264/551 (47%), Gaps = 32/551 (5%)

Query: 141 PIVYYMMLEILS--KTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           P VY   + I S  +TK    A R+L  M  +G +    A+  ++  +        A  +
Sbjct: 144 PDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYEL 203

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
            + M +  + P++   N  +H L    ++ ++ R L ++   G+  N+ T+N  I+G C 
Sbjct: 204 FNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCR 263

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
              +  A+ ++D +  +G +PD V+Y T++  LCK   + E    + K+VN        G
Sbjct: 264 KGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVN--------G 315

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
            +E               PD  TY  +++G+C++G L  A+K+LQ     G  P+  +Y 
Sbjct: 316 GLE---------------PDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYC 360

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           + +NGLC N +   A  + N +  +   P  I Y++++ GL +EG + +A  ++ EM + 
Sbjct: 361 SLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSEN 420

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G        NL+I  LC+ G +  A   M + + KG   +V  F +LI G+C++  +E  
Sbjct: 421 GCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETT 480

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           + +L+ M+     PD +TY ++++ LSK  + E+  E    M+ KG VP  +TY  +   
Sbjct: 481 IQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTES 540

Query: 559 YCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKI---LGKVLRTAS 613
            C+ G+V + L L++++L+K       ++  +I    + G L+ A ++   +G+  + + 
Sbjct: 541 LCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSH 600

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
               +T ++++ ++  K    +  K+   M      PD    + + +   + G ++    
Sbjct: 601 T--TATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYK 658

Query: 674 LMLRFVERGHI 684
            +L  +E+G I
Sbjct: 659 FLLEMIEKGFI 669



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 180/370 (48%), Gaps = 2/370 (0%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G+++EA ++  +M    C P V++Y A++N     G   QA K+  +M + G  P+  +
Sbjct: 89  KGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYT 148

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           +T  +   C   +   A  ++N    +    NA+ Y  V+ G   E    EA ++  +M+
Sbjct: 149 FTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDML 208

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           + G FP     N L+ +LC++G++  +++ + + L KG   N+  F   I+G C+KG L 
Sbjct: 209 RIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLS 268

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            A+S+LD +      PD VTY T+I  L KN  V EA + + K+++ GL P   TY T+I
Sbjct: 269 GAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLI 328

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
             YC++G +++  K+L+  + K        Y  +I  LC    ++ A  +    L    K
Sbjct: 329 DGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLK 388

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
                 ++L++    +G+ L A ++   M       D+     V   L   G   +A+ L
Sbjct: 389 PTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNL 448

Query: 675 MLRFVERGHI 684
           M   + +G++
Sbjct: 449 MNDAIAKGYV 458


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 245/492 (49%), Gaps = 29/492 (5%)

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           R++R+  R  +      F   + ++++  +    + + + M    V  N+   N  I+ L
Sbjct: 78  RMVRMNPRPSVA----EFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCL 133

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
              N +  A+  L +M   GI P   T+N LI G C+  +IK+A++L +EM  +G  P+ 
Sbjct: 134 CRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNV 193

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
           +SY T++  LCK                        G    A ++  +M Q GC PDVVT
Sbjct: 194 ISYNTIINGLCK-----------------------TGNTSMAVDVFKKMEQNGCKPDVVT 230

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y  +++  C+   ++ A + L +M   G  PN  +Y   ++G C  G+  EA  +     
Sbjct: 231 YNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMV 290

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                P+ +T ++++ GL +EG +SEA  V   M +KG  P     N L+   C +  M+
Sbjct: 291 GRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMN 350

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            AKK  +  + +GCA  V ++  LI GFC+   ++EA SLL +MY    +PDTVTY+T++
Sbjct: 351 EAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 410

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--Q 579
             L + GR +EA  +  +M S GL+P +VTY  ++  +C+ G +++ LKLL+ M  K  +
Sbjct: 411 QGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLE 470

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                +  +IE +   G LE A ++  K+     +    T  V+++  L +G+   AY +
Sbjct: 471 PNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDL 530

Query: 640 ACRMFNRNLIPD 651
             +M +   +P+
Sbjct: 531 FRKMEDDGFLPN 542



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 216/452 (47%), Gaps = 34/452 (7%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M RRG E    +++ ++    + G    A+ V   M++    P+++  NT I  L     
Sbjct: 184 MVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRL 243

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +  A+ FL  M   GI PNV TYNC++ G+C L ++ +A +L  EM  +   PD V+   
Sbjct: 244 VNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTI 303

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LCKE                       G + EA+ +   M++ G  P++ TY A++
Sbjct: 304 LVDGLCKE-----------------------GMVSEARLVFETMTEKGVEPNISTYNALM 340

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G+C    +++AKK+ + M   GC P   SY   +NG C + +  EA+ ++     +   
Sbjct: 341 DGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALN 400

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ +TYS +M GL + G+  EA ++ +EM   G  P  V  ++L+   C+ G +D A K 
Sbjct: 401 PDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKL 460

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           ++    K    N+V+ T LI G    G LE A  L   ++     P   TYT +I  L K
Sbjct: 461 LKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLK 520

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN 586
            G  +EA +L  KM   G +P   +Y  +I  + Q       ++L+++M+ K        
Sbjct: 521 EGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGK-------- 572

Query: 587 QVIENLCSFGY---LEEAGKILGKVLRTASKA 615
           +   NL +F     LE   +I+ + +R +S+ 
Sbjct: 573 RFSANLSTFQMLLDLESQDEIISQFMRGSSQG 604



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 243/510 (47%), Gaps = 32/510 (6%)

Query: 124 ALQFFYWADRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           AL  FY   R  R    P V  +   L   +K K       +   M   G+     + + 
Sbjct: 72  ALASFY---RMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+    R   +  A+ +L  M K  + P     N  I+ L    K+ +A+     M   G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             PNV++YN +I G C       A+ +  +M   GC PD V+Y T++  LCK        
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCK-------- 240

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
              +++VND            A E +++M   G  P+V TY  +V+GFC +G+L++A ++
Sbjct: 241 ---DRLVND------------AMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRL 285

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
            ++M      P+TV+ T  ++GLC  G   EAR +  T  E+   PN  TY+ +M G   
Sbjct: 286 FKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCL 345

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           +  ++EA  V   M+++G  P     N+LI   C+  +MD AK  + E  +K    + V 
Sbjct: 346 QRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVT 405

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +++L++G CQ G  +EAL++  +M      P+ VTY+ ++D   K+G ++EA +L+  M 
Sbjct: 406 YSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQ 465

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS---KQKCRTAYNQVIENLCSFGYL 598
            K L P +V +  +I      G++E   +L  K+ +   +   RT Y  +I+ L   G  
Sbjct: 466 EKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRT-YTVMIKGLLKEGLS 524

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYL 628
           +EA  +  K+       ++ + +V+++ +L
Sbjct: 525 DEAYDLFRKMEDDGFLPNSCSYNVMIQGFL 554



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 182/370 (49%), Gaps = 5/370 (1%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L NQM   G   +V +   ++N  CR+  +D A  +L +M+  G  P   ++ A +NGL
Sbjct: 109 SLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGL 168

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C+ GK  EA E+ N        PN I+Y+ +++GL + G  S A DV ++M + G  P  
Sbjct: 169 CNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDV 228

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N +I SLC++  ++ A +F+ E L++G   NV  +  ++ GFC  G L EA  L  +
Sbjct: 229 VTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKE 288

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      PDTVT T ++D L K G V EA  +   M  KG+ P + TY  ++  YC    
Sbjct: 289 MVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRL 348

Query: 565 VEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           + +  K+ E M+ +Q C     +YN +I   C    ++EA  +L ++   A   D  T  
Sbjct: 349 MNEAKKVFEIMI-RQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYS 407

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
            L++     G P  A  +   M +  L+P+L     + +     G  +EA  L L+ ++ 
Sbjct: 408 TLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKL-LKSMQE 466

Query: 682 GHIQPKSEEH 691
             ++P    H
Sbjct: 467 KKLEPNIVHH 476



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 176/363 (48%), Gaps = 16/363 (4%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           + D + Y  +++ L K +L   A   L  M  RGI   P  F+Y  ++  +   G+L  A
Sbjct: 225 KPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIP--PNVFTYNCMVHGFCILGQLNEA 282

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +   M    V P+ +     +  L     +++A    E M   G+ PN+ TYN L+ G
Sbjct: 283 TRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDG 342

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-------- 307
           YC    + +A K+ + M  +GC+P   SY  ++   CK +R+ E + L+ +M        
Sbjct: 343 YCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPD 402

Query: 308 -VNDSNLFHDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            V  S L       GR +EA  +  +M   G +P++VTY+ +++GFC+ G LD+A K+L+
Sbjct: 403 TVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLK 462

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M     +PN V +T  + G+   GK   A+E+ +    +   P   TY+V++ GL +EG
Sbjct: 463 SMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEG 522

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
              EA D+ R+M   GF P     N++IQ   +      A + + E + K  + N+  F 
Sbjct: 523 LSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQ 582

Query: 484 SLI 486
            L+
Sbjct: 583 MLL 585



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 2/276 (0%)

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            +D A     +M     +P+   +  FL       +      + N  +    T N  + +
Sbjct: 68  SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           V+++ L R   +  A  ++ +M K G  PT    N LI  LC EGK+  A +   E + +
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   NV+++ ++I G C+ G+   A+ +   M      PD VTY TIID+L K+  V +A
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIEN 591
            E + +ML +G+ P V TY  ++H +C +G++ +  +L ++M+ +           +++ 
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDG 307

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           LC  G + EA  +   +     + + ST + L++ Y
Sbjct: 308 LCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGY 343



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 5/266 (1%)

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + +A      MV+    P+  E    + S  ++ +         +    G   NV +   
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI   C+   ++ A+S+L  M+     P   T+  +I+ L   G+++EA EL  +M+ +G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEA 601
             P V++Y T+I+  C+ G     + + +KM  +  C+     YN +I++LC    + +A
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKM-EQNGCKPDVVTYNTIIDSLCKDRLVNDA 247

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
            + L ++L      +  T + +V  +   G    A ++   M  R+++PD      + + 
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDG 307

Query: 662 LILEGKSEEADTLMLRFVERGHIQPK 687
           L  EG   EA  +     E+G ++P 
Sbjct: 308 LCKEGMVSEARLVFETMTEKG-VEPN 332


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 262/519 (50%), Gaps = 20/519 (3%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L+IL    L   A  V R+M   GI      ++ ++ ++ + G+++ A+ ++  MQ+  
Sbjct: 208 ILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERG 267

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
             P+ +  N  I+ L    +L +A   ++ M  AG+  +  TYN LI GYC    + +A+
Sbjct: 268 CYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEAL 327

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR---------DLMEKMVNDSNLFHD- 316
            L +EM  +G SP   S+ T+M   CKE ++ + R         +LM  +++ + L +  
Sbjct: 328 ALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGF 387

Query: 317 --QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G I EA  L++++       ++VTY  +++G CR+G+L+ A K+ + M + G  P+ 
Sbjct: 388 CRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDV 447

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+YT  +NG C  G  L A+E  +        P+   Y+  + G  + G  ++A  +  E
Sbjct: 448 VTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEE 507

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M+ KGF P  +  N+ +  LC+ G ++ A + +Q+ +  G   + V +TS +    + G 
Sbjct: 508 MLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGH 567

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           L E   +  DM    + P  VTYT +I A + NGR++ A    ++M  KG+VP V+TY  
Sbjct: 568 LREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNV 627

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I+ +C+V +++   K   +M  K     +  Y  +I   C+ G  +EA ++  ++L   
Sbjct: 628 LINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKR 687

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            + D+ T   L++  L+K      YKV    F  +LI D
Sbjct: 688 IRPDSCTHGALLKK-LDKD-----YKVQAVQFIESLILD 720



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 221/438 (50%), Gaps = 23/438 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + + +++  LSK    Q AK +++ MA+ G+   P  ++ L+  Y + G L  A+ +   
Sbjct: 273 VTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEE 332

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    V+P +   NT ++      K++ A + L  M    + P++++YN LI G+C L  
Sbjct: 333 MVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGN 392

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           I +A  L+DE+  +  S + V+Y T++  LC+                        G +E
Sbjct: 393 IGEAFILLDELRFRNLSFNIVTYNTLIDGLCR-----------------------LGDLE 429

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A +L   M   G  PDVVTYT +VNG C++G +  AK+   +M H G  P+  +YTA +
Sbjct: 430 TALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARI 489

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
            G    G + +A ++      + + P+ ITY+V ++GL + G L EA +++++M++ G  
Sbjct: 490 VGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHV 549

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V     + +    G +   ++   + L++G    VV +T LI      G L+ A++ 
Sbjct: 550 PDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAY 609

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
             +M      P+ +TY  +I+   K  ++++A +  ++M  KG+ P   TY  +I+  C 
Sbjct: 610 FLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCN 669

Query: 562 VGRVEDLLKLLEKMLSKQ 579
           +G+ ++ L+L  +ML K+
Sbjct: 670 MGKWQEALRLYAQMLGKR 687



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/597 (25%), Positives = 260/597 (43%), Gaps = 63/597 (10%)

Query: 108 PRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRL 166
           P+ +  VL S +    +AL+FF     Q  ++     +  +L+IL    L + A  V+  
Sbjct: 105 PQLLIRVLYSIREKPTIALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVME- 163

Query: 167 MARRGIECRPEAFS-YLMVAYSRAGKLR-NAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
                   R  +F  Y +V     G L    + V   M +    P++  CN  + +L   
Sbjct: 164 --------RIISFEMYGIVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDK 215

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           N L KAL     M   GI P V TYN ++  +C    ++ A+ L+ +M  +GC P +V++
Sbjct: 216 NLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTF 275

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMS 331
             ++  L K+  +++ + L+++M   + L             +  +G + EA  L  +M 
Sbjct: 276 NVLINGLSKKGELQQAKGLIQEMAK-AGLRVSPYTYNPLICGYCKKGLLVEALALWEEMV 334

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
             G  P V ++  ++ GFC+ G++  A++ L  M      P+ +SY   + G C  G   
Sbjct: 335 TRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIG 394

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           EA  +++       + N +TY+ ++ GL R G L  A  +  +M+ +G  P  V   +L+
Sbjct: 395 EAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLV 454

Query: 452 QSLCREGKMDGAKKFM-----------------------------------QECLNKGCA 476
              C+ G M  AK+F                                    +E L KG  
Sbjct: 455 NGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFP 514

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            +V+ +   + G C+ G+LEEA  LL  M      PD VTYT+ + A  +NG + E  E+
Sbjct: 515 PDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREI 574

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCS 594
              MLS+G  PTVVTY  +IH +   GR++  +    +M  K        YN +I   C 
Sbjct: 575 FYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCK 634

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              +++A K   ++       +  T  +L+    N G    A ++  +M  + + PD
Sbjct: 635 VRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPD 691



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 199/407 (48%), Gaps = 14/407 (3%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R  P  Y  ++    K  L   A  +   M  RG+     + + +M  + + GK+ +A  
Sbjct: 304 RVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQ 363

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            LS M K  + P+++  NT I+       + +A   L+ ++   ++ N++TYN LI G C
Sbjct: 364 QLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLC 423

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
            L  ++ A+KL ++M  +G  PD V+Y  ++   CK   +   ++  ++M++   L  DQ
Sbjct: 424 RLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLH-VGLAPDQ 482

Query: 318 -------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                        G   +A +L  +M   G  PDV+TY   VNG C++G L++A ++LQ+
Sbjct: 483 FAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQK 542

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G  P+ V+YT+F++    NG   E RE+         TP  +TY+V++H     G+
Sbjct: 543 MIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGR 602

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L  A     EM +KG  P  +  N+LI   C+  KMD A KF  E   KG   N   +T 
Sbjct: 603 LDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTI 662

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
           LI   C  G  +EAL L   M   +  PD+ T+  ++  L K+ +V+
Sbjct: 663 LINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQ 709



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 160/332 (48%), Gaps = 2/332 (0%)

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           L +A ++ + M  +G +P   +Y   L+  C  G+   A +++   +E    P+ +T++V
Sbjct: 218 LVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNV 277

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           +++GL ++G+L +A  +++EM K G   +P   N LI   C++G +  A    +E + +G
Sbjct: 278 LINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRG 337

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
            +  V +  +++ GFC++G + +A   L DM      PD ++Y T+I    + G + EA 
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAF 397

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
            L+ ++  + L   +VTY T+I   C++G +E  LKL E M+++        Y  ++   
Sbjct: 398 ILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGA 457

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G +  A +   ++L      D       +   L  G    A+K+   M  +   PD+
Sbjct: 458 CKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDV 517

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
                    L   G  EEA  L+ + +  GH+
Sbjct: 518 ITYNVFVNGLCKLGNLEEAGELLQKMIRDGHV 549



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 1/153 (0%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
            + +   M  RG       ++ L+ A++  G+L  AM     MQ+  V PN++  N  I+
Sbjct: 571 GREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLIN 630

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                 K+ +A +F   MQ  GI PN  TY  LI   C++ + ++A++L  +M  K   P
Sbjct: 631 GFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRP 690

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           D  ++  ++  L K+ +++ V+  +E ++ D +
Sbjct: 691 DSCTHGALLKKLDKDYKVQAVQ-FIESLILDGD 722


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 228/476 (47%), Gaps = 14/476 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GIE      + ++  + R  KL  A  V+    K    PN +  +T I+   +  +
Sbjct: 95  MDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGR 154

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++A+  ++RM      PNV+T N LI G C   R+ +A+ LID M   GC  ++++Y  
Sbjct: 155 VSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGP 214

Query: 287 VMGYLCKEKRIKEVRDLMEKM--------VNDSNLFHDQ----GRIEEAKELVNQMSQMG 334
           V+  +CK        DL  KM        V   ++  D     G +++A  L N+M   G
Sbjct: 215 VLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKG 274

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
              DVV Y++++ G C  G  D   KML++M      PN V+++A ++     GK LEA+
Sbjct: 275 IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAK 334

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E+ N        P+ ITYS ++ G  +E +L EA  ++  MV KG  P  V  ++LI S 
Sbjct: 335 ELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSY 394

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+  ++D   +   E  +KG   + V + +L++GFCQ G L  A  L  +M      P  
Sbjct: 395 CKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSV 454

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VTY  ++D L  NG +++A E+  KM    ++  +  Y  +IH  C   +V+D   L   
Sbjct: 455 VTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCS 514

Query: 575 MLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           +  K  +     YN +I  LC  G L EA  +  K+          T ++L+ ++L
Sbjct: 515 LSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHL 570



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 230/481 (47%), Gaps = 24/481 (4%)

Query: 172 IECRPEA----FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           I+ RP      FS L  A +R  +    +     M    +  N+   N  I+      KL
Sbjct: 61  IQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKL 120

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
             A   + R    G  PN +T++ LI G+C   R+ +A+ L+D M      P+ V+  T+
Sbjct: 121 LFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTL 180

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGC 335
           +  LC + R+ E   L+++MV               N     G    A +L  +M +   
Sbjct: 181 INGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSI 240

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
              VV Y+ V++  C+ G LD A  +  +M   G K + V+Y++ + GLC++G+  +  +
Sbjct: 241 KASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAK 300

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           M+         PN +T+S ++    +EGKL EA ++  EMV +G  P  +  + LI   C
Sbjct: 301 MLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFC 360

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           +E ++  A + +   ++KGC  N+V ++ LI  +C+   ++  + L  ++       DTV
Sbjct: 361 KENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTV 420

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY T++    ++G++  A EL  +M+S+G+ P+VVTY  ++   C  G ++  L++ EKM
Sbjct: 421 TYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKM 480

Query: 576 LSKQKCRT-----AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
              QK R       YN +I  +C+   +++A  +   +     K D  T +V++     K
Sbjct: 481 ---QKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKK 537

Query: 631 G 631
           G
Sbjct: 538 G 538



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 189/399 (47%), Gaps = 27/399 (6%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y ++++ L K      A  +   M  +GI+    A+S ++      G+  +   +L  M 
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMI 306

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
              + PN++  +  I V V   KL +A      M   GI P+ +TY+ LI G+C  +R+ 
Sbjct: 307 GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLG 366

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
           +A +++D M  KGC P+ V+Y  ++   CK KR+                       +  
Sbjct: 367 EANQMLDLMVSKGCEPNIVTYSILINSYCKAKRV-----------------------DNG 403

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
             L  ++S  G + D VTY  +V GFC+ G+L+ AK++ Q+M   G  P+ V+Y   L+G
Sbjct: 404 MRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDG 463

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           LC NG+  +A E+    ++         Y++++HG+    K+ +A  +   +  KG  P 
Sbjct: 464 LCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPD 523

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            +  N++I  LC++G +  A    ++    GCA +   +  LIR       +  ++ L++
Sbjct: 524 VLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIE 583

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           +M +     D  T   ++  LS +GR+++     + MLS
Sbjct: 584 EMKMRGFAADASTIKMVVVMLS-DGRLDKT---FLDMLS 618



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 149/328 (45%), Gaps = 4/328 (1%)

Query: 364 QMYHHGCKPNT-VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            + H+ C     VSY   L     + K  EA ++  +  +    P+ I +S +   + R 
Sbjct: 23  SLLHYSCISEAKVSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARR 82

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            +        +EM   G       +N++I   CR+ K+  A   +   L  G   N + F
Sbjct: 83  KEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITF 142

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           ++LI GFC +G + EA++L+D M   K  P+ VT  T+I+ L   GRV EA  L+ +M+ 
Sbjct: 143 STLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVK 202

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEE 600
            G     +TY  V++R C+ G     L L  KM   S +     Y+ VI++LC  G L++
Sbjct: 203 YGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDD 262

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           A  +  ++     KAD      ++    N G      K+   M  RN+IP++     + +
Sbjct: 263 ALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALID 322

Query: 661 RLILEGKSEEADTLMLRFVERGHIQPKS 688
             + EGK  EA  L    V RG I P +
Sbjct: 323 VFVKEGKLLEAKELYNEMVARG-IAPDT 349



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/201 (20%), Positives = 80/201 (39%), Gaps = 35/201 (17%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++   ++     AK + + M  RG+      +  L+      G+L+ A+ + 
Sbjct: 418 DTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIF 477

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             MQK+ +   + I N  IH +   +K+  A      + + G+ P+VLTYN +I G C  
Sbjct: 478 EKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKK 537

Query: 260 HRIKDA-----------------------------------IKLIDEMPLKGCSPDKVSY 284
             + +A                                   ++LI+EM ++G + D  + 
Sbjct: 538 GSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTI 597

Query: 285 YTVMGYLCKEKRIKEVRDLME 305
             V+  L   +  K   D++ 
Sbjct: 598 KMVVVMLSDGRLDKTFLDMLS 618


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 144/497 (28%), Positives = 239/497 (48%), Gaps = 27/497 (5%)

Query: 138 RHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R+ P  I +  +L  L K K    A  + + M  +GIE      S L+  +   G++  +
Sbjct: 127 RNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFS 186

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             VL  + K    PN +I  T +  L +  ++ K+L F +++   G   N ++Y  L+ G
Sbjct: 187 FSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNG 246

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
            C +   + AIKL+  +  +   PD V Y T++  LCK+K + E  D             
Sbjct: 247 LCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDF------------ 294

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
                        +M+  G  PDV+TY+ ++ GFC  G+L  A  +L +M      P+  
Sbjct: 295 -----------YTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVY 343

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +YT  ++ LC  GK  EA+ ++    +E   PN +TYS +M G    G++  A  +   M
Sbjct: 344 TYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAM 403

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           V+    P+    N++I  LC+   +D A   ++E L+K    N V + SLI G C+ G +
Sbjct: 404 VQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRI 463

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
             AL L+ +++   +  D +TYT+++D L KN  +++A  L MKM  +G+ P   TY  +
Sbjct: 464 TSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTAL 523

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I   C+  R+++  KL + +L K  C     YN +I  LC  G L+EA  +  K+     
Sbjct: 524 IDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGC 583

Query: 614 KADASTCHVLVESYLNK 630
             DA T  +++ S   K
Sbjct: 584 IPDAVTFEIIIRSLFEK 600



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 173/349 (49%), Gaps = 12/349 (3%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D ++Y  +++ L K KL   A      M  RGI      +S L+  +  AG+L  A  
Sbjct: 269 RPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFS 328

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L+ M    + P++      I  L    KL +A   L  M   G+ PNV+TY+ L+ GYC
Sbjct: 329 LLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYC 388

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
            +  + +A ++   M     +P   SY  ++  LCK K + E  +L+ +M++ +      
Sbjct: 389 LVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTV 448

Query: 312 --NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             N   D     GRI  A +L+ ++   G   DV+TYT++++G C+   LD+A  +  +M
Sbjct: 449 TYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKM 508

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G +PN  +YTA ++GLC   +   A+++      +    +  TY+V++ GL +EG L
Sbjct: 509 KERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGML 568

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
            EA  +  +M   G  P  V   ++I+SL  + + D A+K + E + KG
Sbjct: 569 DEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 114/511 (22%), Positives = 214/511 (41%), Gaps = 66/511 (12%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY----LCKEKR 296
           GI PN++T + LI     L ++  +  ++ ++   G  P+ ++  T+M        K  R
Sbjct: 6   GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLPR 65

Query: 297 IKEVRDLMEKMVNDSNL-------------------FHDQGR-----IEEAKELVNQMSQ 332
           + E R     M   S+L                   FH Q       + +A    N M  
Sbjct: 66  MIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGMLL 125

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           M   P ++ +  ++    ++     A  + +QM   G +P+ V+ +  +N  CH G+   
Sbjct: 126 MRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAF 185

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           +  ++    +  + PN I  + +M GL  +G++ ++     ++V +GF    V    L+ 
Sbjct: 186 SFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLN 245

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+ G+   A K ++   ++    +VV + ++I G C+   + EA     +M      P
Sbjct: 246 GLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFP 305

Query: 513 DTVTYTT-----------------------------------IIDALSKNGRVEEATELM 537
           D +TY+T                                   +IDAL K G+++EA  L+
Sbjct: 306 DVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLL 365

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSF 595
             M  +G+ P VVTY T++  YC VG V +  ++   M+  +   +  +YN +I  LC  
Sbjct: 366 GVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKG 425

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
             ++EA  +L ++L      +  T + L++     G    A  +   + +R    D+   
Sbjct: 426 KSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITY 485

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHIQP 686
             + + L      ++A  L ++  ERG IQP
Sbjct: 486 TSLLDGLCKNQNLDKAIALFMKMKERG-IQP 515


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 239/512 (46%), Gaps = 28/512 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R+ I C   +F+ L+  +    KL  A+     + K  + P+++   T +H L V ++
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++AL F  +M      PNV+T+  L+ G C   RI +A+ L+D M   G  P +++Y T
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQM 333
           ++  +CK+       +L+ KM   S++  +              GR  +A+ L  +M + 
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  PD+ TY +++ GFC  G    A+++LQ+M      P+ V+Y A +N     GK  EA
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            E+ +        PN ITY+ ++ G  ++ +L  A D+   M  KG  P       LI  
Sbjct: 345 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 404

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C   ++D   + + E   +G   N V + +LI GFC  GDL  AL L   M      PD
Sbjct: 405 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 464

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSK------------GLVPTVVTYRTVIHRYCQ 561
            VT  T++D L  NG++++A E M K + K            G+ P V+TY  +I     
Sbjct: 465 IVTCNTLLDGLCDNGKLKDALE-MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 523

Query: 562 VGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G+  +  +L E+M  +        Y+ +I+ LC    L+EA ++   +   +   +  T
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 583

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            + L+  Y   G      ++ C M  R ++ D
Sbjct: 584 FNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 615



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 221/447 (49%), Gaps = 38/447 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           ++Y  +++ L K      A+ +   M  +GI   P+ F+Y  ++V +  +G+  +A  +L
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI--FPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  ++P+++  N  I+  V   K  +A    + M   GI PN +TYN +I G+C  
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 373

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R+  A  +   M  KGCSPD  ++ T++   C  KRI                      
Sbjct: 374 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI---------------------- 411

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            ++  EL+++M + G + + VTY  +++GFC VG+L+ A  + QQM   G  P+ V+   
Sbjct: 412 -DDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 470

Query: 380 FLNGLCHNGKSLEAREMINTSEEE-----------WWTPNAITYSVVMHGLRREGKLSEA 428
            L+GLC NGK  +A EM    ++               P+ +TY++++ GL  EGK  EA
Sbjct: 471 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA 530

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            ++  EM  +G  P  +  + +I  LC++ ++D A +      +K  + NVV F +LI G
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING 590

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +C+ G +++ L L  +M       D + Y T+I    K G +  A ++  +M+S G+ P 
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPD 650

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            +T R ++  +     +E  + +LE +
Sbjct: 651 TITIRNMLTGFWSKEELERAVAMLEDL 677



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 244/521 (46%), Gaps = 45/521 (8%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L   +     L +A+ + S M ++   P+++     + V+V   +    +   ++M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I  ++ ++N LIK +C   ++  A+    ++   G  PD V++ T++  LC E R+ E  
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
           D           FH             QM +  C P+VVT+T ++NG CR G + +A  +
Sbjct: 170 D----------FFH-------------QMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE-EWWTPNAITYSVVMHGLR 420
           L +M   G +P  ++Y   ++G+C  G ++ A  ++   EE     PN + YS ++  L 
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           ++G+ S+A ++  EM +KG FP     N +I   C  G+   A++ +QE L +  + +VV
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +LI  F ++G   EA  L D+M      P+T+TY ++ID   K  R++ A ++   M
Sbjct: 327 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 386

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYL 598
            +KG  P V T+ T+I  YC   R++D ++LL +M  +        YN +I   C  G L
Sbjct: 387 ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 446

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN------------- 645
             A  +  +++ +    D  TC+ L++   + G      K A  MF              
Sbjct: 447 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG----KLKDALEMFKAMQKSKMDLDASH 502

Query: 646 --RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
               + PD+     +   LI EGK  EA+ L      RG +
Sbjct: 503 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV 543



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 232/479 (48%), Gaps = 25/479 (5%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           AL FF+    +   R + + +  ++  L +      A  +L  M   G++     +  ++
Sbjct: 168 ALDFFHQM-FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIV 226

Query: 184 VAYSRAGKLRNAMYVLSMMQKAA-VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
               + G   +A+ +L  M++ + + PN++I +  I  L    + + A      MQ  GI
Sbjct: 227 DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI 286

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
            P++ TYN +I G+C   R  DA +L+ EM  +  SPD V+Y  ++    KE +  E  +
Sbjct: 287 FPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAE 346

Query: 303 LMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           L ++M+    +            F  Q R++ A+++   M+  GC PDV T+T +++G+C
Sbjct: 347 LYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYC 406

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
               +D   ++L +M   G   NTV+Y   ++G C  G    A ++          P+ +
Sbjct: 407 GAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 466

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKK-----------GFFPTPVEINLLIQSLCREGK 459
           T + ++ GL   GKL +A ++ + M K            G  P  +  N+LI  L  EGK
Sbjct: 467 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGK 526

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
              A++  +E  ++G   + + ++S+I G C++  L+EA  +   M      P+ VT+ T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNT 586

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           +I+   K GRV++  EL  +M  +G+V   + Y T+I+ + +VG +   L + ++M+S 
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 645


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 216/434 (49%), Gaps = 33/434 (7%)

Query: 172 IECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           + C P     L+ A  +  +     +V   M +  ++PNL+  NT I+ L    KL KA 
Sbjct: 196 LSCNP-----LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAG 250

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK---LIDEMPLKGCSPDKVSYYTVM 288
             ++ M++ G  PNV+TYN LI GYC + R+    K   ++ EM     SP+ V++  ++
Sbjct: 251 DVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLI 310

Query: 289 GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
              CK++ +     + E                       +M   G  P VVTY ++VNG
Sbjct: 311 DGFCKDENLSAALKVFE-----------------------EMQSQGLKPTVVTYNSLVNG 347

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
            C  G+L++AK +L +M     KPN ++Y A +NG C      EARE+ +   ++  TPN
Sbjct: 348 LCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPN 407

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
            IT++ ++HG  + GK+ EA  + + M++KGF P     N LI   CREGKM+  K  + 
Sbjct: 408 VITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLN 467

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E   +G   + V +  LI  +C+K + ++A  L+D+M      P  +TY  +++     G
Sbjct: 468 EMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYN 586
            +  A  L  +M  +G    VVTY  +I  YC+ G++ED   LL +ML K     RT Y 
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE 587

Query: 587 QVIENLCSFGYLEE 600
            + E +   G+L +
Sbjct: 588 IIKEEMMEKGFLPD 601



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 218/438 (49%), Gaps = 28/438 (6%)

Query: 135 WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
           +RY+   +    +L  L K     G + V + M RR I      F+ ++    + GKL  
Sbjct: 189 YRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNK 248

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLV----VGNKLAKALRFLERMQLAGITPNVLTYN 250
           A  V+  M+     PN++  NT I        VG K+ KA   L+ M    ++PN +T+N
Sbjct: 249 AGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVG-KMYKADAILKEMVENKVSPNSVTFN 307

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI G+C    +  A+K+ +EM  +G  P  V+Y +++  LC E                
Sbjct: 308 VLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNE---------------- 351

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                  G++ EAK L+++M      P+V+TY A++NG+C+   L++A+++   +   G 
Sbjct: 352 -------GKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL 404

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PN +++   L+G C  GK  EA  +     E+ + PNA TY+ ++ G  REGK+ E  +
Sbjct: 405 TPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKN 464

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           ++ EM  +G     V  N+LI + C + +   A + + E L+KG   + + +  L+ G+C
Sbjct: 465 LLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYC 524

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
            +G+L  AL+L   M    +  + VTY  +I    + G++E+A  L+ +ML KGL+P   
Sbjct: 525 MEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRT 584

Query: 551 TYRTVIHRYCQVGRVEDL 568
           TY  +     + G + D+
Sbjct: 585 TYEIIKEEMMEKGFLPDI 602



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 166/319 (52%), Gaps = 5/319 (1%)

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
            V++   +++   +  E    + + ++M      PN +++   +NGLC  GK  +A +++
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253

Query: 398 NTSEEEWWTPNAITYSVVMHG---LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +  +   + PN +TY+ ++ G   + R GK+ +A  +++EMV+    P  V  N+LI   
Sbjct: 254 DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF 313

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C++  +  A K  +E  ++G    VV + SL+ G C +G L EA  LLD+M      P+ 
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNV 373

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           +TY  +I+   K   +EEA EL   +  +GL P V+T+ T++H YC+ G++E+   L + 
Sbjct: 374 ITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKV 433

Query: 575 MLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           ML K     A  YN +I   C  G +EE   +L ++     KAD  T ++L+ ++  K  
Sbjct: 434 MLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKE 493

Query: 633 PLLAYKVACRMFNRNLIPD 651
           P  A ++   M ++ L P 
Sbjct: 494 PKKAARLIDEMLDKGLKPS 512



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 144/301 (47%), Gaps = 5/301 (1%)

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
           N K++   E    + +  +  + ++ + ++  L +E +      V +EM+++   P  + 
Sbjct: 173 NSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLIT 232

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK---GDLEEALSLLD 503
            N +I  LC+ GK++ A   + +    G   NVV + +LI G+C+    G + +A ++L 
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILK 292

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M   K  P++VT+  +ID   K+  +  A ++  +M S+GL PTVVTY ++++  C  G
Sbjct: 293 EMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEG 352

Query: 564 RVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           ++ +   LL++MLS   +     YN +I   C    LEEA ++   + +     +  T +
Sbjct: 353 KLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFN 412

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
            L+  Y   G    A+ +   M  +  +P+      +      EGK EE   L+     R
Sbjct: 413 TLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCR 472

Query: 682 G 682
           G
Sbjct: 473 G 473


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/565 (25%), Positives = 261/565 (46%), Gaps = 32/565 (5%)

Query: 115 LRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIEC 174
           LR ++   +AL FF        ++H P+ + +M+  L+        + +L+ M  +G  C
Sbjct: 50  LRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC 109

Query: 175 RPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
             + F  ++  Y + G    A+ +   +++    P++ I N  +  L+  N++       
Sbjct: 110 SEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY 169

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
             M+  G  PNV TYN L+K  C  +++  A KL+ EM  KGC PD VSY TV+  +C+ 
Sbjct: 170 RDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV 229

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
             +KE R+L E             R E               P V  Y A++NG C+  +
Sbjct: 230 GLVKEGRELAE-------------RFE---------------PVVSVYNALINGLCKEHD 261

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
              A +++++M   G  PN +SY+  +N LC++G+   A   +    +    PN  T S 
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS 321

Query: 415 VMHGLRREGKLSEACDVVREMVKK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           ++ G    G   +A D+  +M++  G  P  V  N L+Q  C  G +  A          
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI 381

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           GC+ N+  + SLI GF ++G L+ A+ + + M      P+ V YT +++AL ++ + +EA
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIE 590
             L+  M  +   P+V T+   I   C  GR++   K+  +M  + +C      YN++++
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            L     +EEA  +  ++     +  +ST + L+    N G+P +A ++  +M      P
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561

Query: 651 DLKLCKKVSERLILEGKSEEADTLM 675
           D      +      +GK+E A  ++
Sbjct: 562 DEITMNMIILAYCKQGKAERAAQML 586



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 181/425 (42%), Gaps = 62/425 (14%)

Query: 308 VNDSNLFHDQGRIEEAKEL--VNQMSQMGCIP-----------------DVVTYTAVVNG 348
           +N ++L  +     E KEL  V ++ Q  C+P                   +T+  ++  
Sbjct: 26  LNVNHLLTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRK 85

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
               G++D  + +LQQM   G   +   + + ++     G +  A EM    +E    P+
Sbjct: 86  LAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPS 145

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
              Y+ V+  L  E ++     V R+M + GF P     N+L+++LC+  K+DGAKK + 
Sbjct: 146 VKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLV 205

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E  NKGC  + V++T++I   C+ G ++E   L +     + +P    Y  +I+ L K  
Sbjct: 206 EMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE-----RFEPVVSVYNALINGLCKEH 260

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK---------- 578
             + A ELM +M+ KG+ P V++Y T+I+  C  G++E     L +ML +          
Sbjct: 261 DYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLS 320

Query: 579 ----------------------------QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
                                       Q    AYN +++  CS G + +A  +   +  
Sbjct: 321 SLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                +  T   L+  +  +G    A  +  +M      P++ +   + E L    K +E
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE 440

Query: 671 ADTLM 675
           A++L+
Sbjct: 441 AESLI 445



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 134/309 (43%), Gaps = 39/309 (12%)

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFP-TPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           V+  LR+E  +  A    + +     F  TP+   ++I+ L  +G++D  +  +Q+   +
Sbjct: 46  VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSL-------------------LDDM--------- 505
           G   +   F S+I  + Q G  E A+ +                   LD +         
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMI 165

Query: 506 YLCKKD-------PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           Y+  +D       P+  TY  ++ AL KN +V+ A +L+++M +KG  P  V+Y TVI  
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
            C+VG V++  +L E+    +   + YN +I  LC     + A +++ +++      +  
Sbjct: 226 MCEVGLVKEGRELAERF---EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           +   L+    N G   LA+    +M  R   P++     + +   L G + +A  L  + 
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342

Query: 679 VERGHIQPK 687
           +    +QP 
Sbjct: 343 IRGFGLQPN 351


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 242/517 (46%), Gaps = 32/517 (6%)

Query: 87  LRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFY---WADRQWRYRHDPIV 143
           + +A +  L   LR LL S KP     ++            F    W      +RH    
Sbjct: 44  INNAQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQS 103

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARR-----------------GIECRPEAFSYLMVAY 186
           Y  M   LS  ++ Q  + ++R +  R                 G  C    F  LM+AY
Sbjct: 104 YCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAY 163

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
             +G + +A+    +++ +        C   +  ++  N       F   +   G  P V
Sbjct: 164 WDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKV 223

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
             YN LI  +C    I+DA  + +E+  +G  P  VS+ T++  LCK + + E   L + 
Sbjct: 224 QYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKT 283

Query: 307 MVND---------SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
           M  +         S L H    +GR++ A++L ++M Q G  P+ +T+TA+++G CR   
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRR 343

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           +D A     QM   G KP+ V Y   LNGLC  G   +AR++++        P+ ITY+ 
Sbjct: 344 IDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTT 403

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ G  +EG L  A ++ + M ++G     V    LI   CR+G++  A++ ++E +  G
Sbjct: 404 LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAG 463

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              +   +T +I G+C+KG+++    LL +M +    P  +TY  +++ L K G+++ A 
Sbjct: 464 MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNAN 523

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
            L+  ML+ G+ P  +TY  ++  +C+ G+ EDLLKL
Sbjct: 524 MLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 221/483 (45%), Gaps = 47/483 (9%)

Query: 214 CNTAIHVLVV-GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID-- 270
           C + I  LV    K + A  F   +  AG   +   ++ L+  Y D   + DAI+     
Sbjct: 120 CQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLV 179

Query: 271 -----EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
                ++P  GC           GYL            ++KM+N ++             
Sbjct: 180 RNSNFQIPFHGC-----------GYL------------LDKMINSNSPV-------TIWT 209

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
             +++ + G  P V  Y  ++N FC+ G +  AK +  ++   G +P TVS+   +NGLC
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            +    E   +  T EE    P+  TYSV++HGL +EG+L  A  +  EM ++G  P  +
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               LI   CR  ++D A     + L  G   ++V + +L+ G C+ GD+ +A  L+D+M
Sbjct: 330 TFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
            +    PD +TYTT+ID   K G +E A E+   M  +G+V   V +  +I  +C+ GRV
Sbjct: 390 RMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449

Query: 566 EDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
            D  + L +M+    +     Y  VI+  C  G ++   K+L ++     K    T +VL
Sbjct: 450 RDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVL 509

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG--KSEEADTLMLRFVER 681
           +     +G    A  +   M N  + PD      ++  ++LEG  K+ +A+ L+    E+
Sbjct: 510 MNGLCKQGQMKNANMLLEAMLNLGVTPD-----DITYNILLEGHCKNGKAEDLLKLRNEK 564

Query: 682 GHI 684
           G I
Sbjct: 565 GLI 567



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + +  ++    +    + A+R LR M   G+  +P+  +Y MV   Y + G ++    
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAGM--KPDDATYTMVIDGYCKKGNVKMGFK 489

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  MQ     P ++  N  ++ L    ++  A   LE M   G+TP+ +TYN L++G+C
Sbjct: 490 LLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHC 549

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
              + +D +KL +E   KG   D  +YYT +
Sbjct: 550 KNGKAEDLLKLRNE---KGLIVD-YAYYTSL 576


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 249/479 (51%), Gaps = 16/479 (3%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           ++ K   ++Y L  M      P++++C   I       K+ KA++ +E ++  G  P+V 
Sbjct: 89  KSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVF 147

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            YN +I G+C   R+  A K++D M  +G  PD V+Y  ++G  C   R+     +M+++
Sbjct: 148 AYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQL 207

Query: 308 VNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           + D+                 QG I+EA +L+++M   G  PD  TY  VVNG C+ G L
Sbjct: 208 LKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGML 267

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D+A + L ++  +GC     +Y   L  L + GK     ++++    +   PN ITYS +
Sbjct: 268 DRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTL 327

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +  L R+GK+ EA +V++ M +K   P     + LI +LCREGK+D A +F+ + ++ G 
Sbjct: 328 ITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGH 387

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             +++++ S++   C+ G+ +EAL++ + +      P+  +Y T+  AL  +G    A  
Sbjct: 388 LPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALG 447

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENL 592
           ++++MLS G+ P  +TY ++I   C+ G V+  ++LL  M   +KC+    +YN V+  L
Sbjct: 448 MILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGL 507

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           C    + +A ++L  ++      + +T  +L++     G    A ++A  + N + I +
Sbjct: 508 CKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNMDAISE 566



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 240/471 (50%), Gaps = 33/471 (7%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y+ D I+   +++     K  + A +V+ ++ + G   +P+ F+Y  ++  + +A ++ +
Sbjct: 108 YKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG---KPDVFAYNAVISGFCKADRVDH 164

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  VL  M+K    P+++  N  I       +L  ALR ++++      P V+TY  LI+
Sbjct: 165 ASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIE 224

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
                  I +A+KL+DEM  +G  PD+ +Y  V+  +CKE                    
Sbjct: 225 ATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKE-------------------- 264

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G ++ A E ++++S+ GC+  V TY  ++      G+ +  +K++  M   GC+PN 
Sbjct: 265 ---GMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNP 321

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           ++Y+  +  LC +GK  EA+ ++   +E+   P+  +Y  ++  L REGK+  A + + +
Sbjct: 322 ITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDD 381

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M+  G  P  +  N ++ SLC+ G  D A    ++    GC  N  ++ +L       GD
Sbjct: 382 MISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGD 441

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML-SKGLVPTVVTYR 553
              AL ++ +M     DPD +TY ++I  L ++G V++A EL++ M  S+   PTV++Y 
Sbjct: 442 KIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYN 501

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEA 601
           TV+   C+V R+ D +++L  M++ + C    T Y  +I+ +   G+  +A
Sbjct: 502 TVLLGLCKVQRIIDAIEVLAAMVN-EGCLPNETTYTLLIQGIGFAGWRYDA 551



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 199/409 (48%), Gaps = 15/409 (3%)

Query: 292 CKEKRIKEVRDLMEKMVN-----DSNL-------FHDQGRIEEAKELVNQMSQMGCIPDV 339
           CK  +  E    ++ MVN     D  L       F +  +IE+A +++  + + G  PDV
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDV 146

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
             Y AV++GFC+   +D A K+L +M   G +P+ V+Y   +   C  G+   A  +++ 
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             ++   P  ITY++++     +G + EA  ++ EM+ +G  P     N+++  +C+EG 
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +D A +F+      GC   V  +  L+R    +G  E    L+ DM +   +P+ +TY+T
Sbjct: 267 LDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYST 326

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +I AL ++G+++EA  ++  M  K L P   +Y  +I   C+ G+V+  ++ L+ M+S  
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386

Query: 580 KCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
                 +YN ++ +LC  G  +EA  I  K+       +A + + L  +  + G  + A 
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRAL 446

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
            +   M +  + PD      +   L  +G  ++A  L++   E    QP
Sbjct: 447 GMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQP 495



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 141/296 (47%), Gaps = 26/296 (8%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y ++L  L      +  ++++  M  +G E  P  +S L+ A  R GK+  A  VL +M
Sbjct: 288 TYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVM 347

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
           ++ A+AP+    +  I  L    K+  A+ FL+ M   G  P++L+YN ++   C     
Sbjct: 348 KEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNA 407

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE-KRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            +A+ + +++   GC P+  SY T+ G L     +I+ +  ++E + N            
Sbjct: 408 DEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSN------------ 455

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH-HGCKPNTVSYTAF 380
                       G  PD +TY ++++  CR G +DQA ++L  M+    C+P  +SY   
Sbjct: 456 ------------GIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTV 503

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           L GLC   + ++A E++     E   PN  TY++++ G+   G   +A ++   +V
Sbjct: 504 LLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLV 559



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 3/205 (1%)

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
            NF   +   C+    +E+L  L  M      PD +  T +I       ++E+A ++M +
Sbjct: 78  TNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-E 136

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGY 597
           +L K   P V  Y  VI  +C+  RV+   K+L++M  +  +     YN +I N C  G 
Sbjct: 137 ILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
           L+ A +++ ++L+   K    T  +L+E+ + +G    A K+   M +R L PD      
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256

Query: 658 VSERLILEGKSEEADTLMLRFVERG 682
           V   +  EG  + A   + R  + G
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNG 281


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 156/600 (26%), Positives = 274/600 (45%), Gaps = 77/600 (12%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRV-LRLMARRGIE----------------CRPEAF 179
           ++H    +  M+ IL +++    A+ V LR++ + G+                   P  F
Sbjct: 232 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 291

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
             L+  Y +A KLR       +++   +  ++  CN+ +  LV    +  A    + +  
Sbjct: 292 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 351

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
           +G+  NV T N +I   C   +I++    + +M  KG  PD V+Y T++   C+      
Sbjct: 352 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR------ 405

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                            QG +EEA EL++ MS  G  P V TY A++NG C+ G+  +AK
Sbjct: 406 -----------------QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 448

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            +L +M   G  P+T +Y   L   C N   ++A  + +    +   P+ +++S ++  L
Sbjct: 449 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 508

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            + G L +A    R+M   G  P  V   +LI   CR G M  A K   E L +GC ++V
Sbjct: 509 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDV 568

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           V + +++ G C++  L EA  L  +M      PD  T+TT+I+   K+G + +A  L   
Sbjct: 569 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEM 628

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGY 597
           M+ + L P VVTY T+I  +C+   +E + +L   M+S++      +Y  +I   C+ G 
Sbjct: 629 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 688

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESY----------------LNKGI--------P 633
           + EA ++  +++    +A   TC+ +V+ Y                L KGI         
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 748

Query: 634 LL-----------AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L+           A+ +  +M N  L+PD+     +      +G+ +EA+ +ML+ +ERG
Sbjct: 749 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 808



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 250/563 (44%), Gaps = 34/563 (6%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPI-------VYYM--MLEILSK 153
            R LK + +C  + +       L    W D  W    + +       VY +  M+  L K
Sbjct: 311 FRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK 370

Query: 154 TKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI 213
            +  +  K  L  M  +G+      ++ L+ AY R G L  A  ++  M    + P +  
Sbjct: 371 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFT 430

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
            N  I+ L    K  +A   L+ M   G++P+  TYN L+   C    + DA ++ DEMP
Sbjct: 431 YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMP 490

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQM 333
            +G  PD VS+  ++G L K                        G +++A +    M   
Sbjct: 491 SQGVVPDLVSFSALIGLLSK-----------------------NGCLDQALKYFRDMKNA 527

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  PD V YT ++ GFCR G + +A K+  +M   GC  + V+Y   LNGLC      EA
Sbjct: 528 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEA 587

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            E+     E    P+  T++ +++G  ++G +++A  +   M+++   P  V  N LI  
Sbjct: 588 DELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 647

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C+  +M+   +   + +++    N +++  LI G+C  G + EA  L D+M     +  
Sbjct: 648 FCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 707

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            +T  TI+    + G   +A E +  ML KG+VP  +TY T+I+ + +   ++    L+ 
Sbjct: 708 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 767

Query: 574 KMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           KM +         YN ++      G ++EA  I+ K++      D ST   L+  ++ + 
Sbjct: 768 KMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQN 827

Query: 632 IPLLAYKVACRMFNRNLIPDLKL 654
               A++V   M  R  +PD K 
Sbjct: 828 NLKEAFRVHDEMLQRGFVPDDKF 850



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 141/559 (25%), Positives = 264/559 (47%), Gaps = 14/559 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           +P+V+ +++    + +  +      R++  +G+     A + L+    + G +  A  + 
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + ++ V  N+   N  I+ L    K+     FL  M+  G+ P+V+TYN LI  YC  
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK---RIKEVRDLMEK--MVNDSNLF 314
             +++A +L+D M  KG  P   +Y  ++  LCK     R K V D M K  M  D+  +
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 466

Query: 315 H-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +           + +A+ + ++M   G +PD+V+++A++    + G LDQA K  + M +
Sbjct: 467 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 526

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+ V YT  + G C NG   EA ++ +   E+    + +TY+ +++GL +E  LSE
Sbjct: 527 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSE 586

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A ++  EM ++G FP       LI    ++G M+ A    +  + +    +VV + +LI 
Sbjct: 587 ADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 646

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC+  ++E+   L +DM   +  P+ ++Y  +I+     G V EA  L  +M+ KG   
Sbjct: 647 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEA 706

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKIL 605
           T++T  T++  YC+ G      + L  ML K        YN +I        ++ A  ++
Sbjct: 707 TIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALV 766

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            K+  +    D  T +V++  +  +G    A  +  +M  R + PD      +    + +
Sbjct: 767 NKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQ 826

Query: 666 GKSEEADTLMLRFVERGHI 684
              +EA  +    ++RG +
Sbjct: 827 NNLKEAFRVHDEMLQRGFV 845


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 265/556 (47%), Gaps = 54/556 (9%)

Query: 101 NLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGA 160
            L  +  P Q+   LR Q DE  AL+   WA +Q  +R +  +Y  +L  L K       
Sbjct: 47  TLSSNFTPAQLLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSM 106

Query: 161 KRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQ-KAAVAPNLLICNTA 217
           K +L+ M  +G++C+ +    L+   +Y++       + ++ +M+ +  +A + L+ N  
Sbjct: 107 KDILQEM--KGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFL 164

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           ++VLV GNKL         M   GI P+V T+N LIK  C  H+I+ AI +++EM   G 
Sbjct: 165 LNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGL 224

Query: 278 SPDKVSYYTVM-GYL----------------------------------CKEKRIKEVRD 302
            PD+ ++ T+M G++                                  CKE RI+E   
Sbjct: 225 VPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALS 284

Query: 303 LMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
            +++M N       +G+   A EL N+M   GC PD  TY  +++  C  G+L +A  +L
Sbjct: 285 FIDEMSN-------EGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLL 337

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           ++M   GC  N ++Y   ++G C N K  EA E+ +  E +  + N++TY+ ++ GL + 
Sbjct: 338 REMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKS 397

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            ++ EA  ++ +M+ +G  P     N ++   CREG +  A   +Q   + GC  ++V +
Sbjct: 398 RRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTY 457

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            +LI G C+ G +E A  LL  + L         Y  +I AL K  R +EA  L  +M  
Sbjct: 458 GTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEE 517

Query: 543 KGLVPTVVTYRTVIHRYCQVG-----RVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGY 597
           KG  P   TY+ V       G      V+ +++++EK    +   +++  + E LCS   
Sbjct: 518 KGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPE--FSSFYMLAEGLCSLSM 575

Query: 598 LEEAGKILGKVLRTAS 613
            +   K++  V+  A+
Sbjct: 576 EDTLIKLVDLVMEKAN 591



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 172/344 (50%), Gaps = 36/344 (10%)

Query: 174 CRPEAFSYLMVAYSRA--GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C+P+ F+Y M+  S    GKL+ A+ +L  M+ +  A N++  NT I       K+ +A 
Sbjct: 310 CQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAE 369

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
              ++M++ G++ N +TYN LI G C   R+++A +L+D+M ++G  PDK +Y +++ Y 
Sbjct: 370 EIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYF 429

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           C+E                       G I++A ++V  M+  GC PD+VTY  ++ G C+
Sbjct: 430 CRE-----------------------GDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCK 466

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            G ++ A ++L+ +   G      +Y   +  L    ++ EA  +    EE+  TP+A T
Sbjct: 467 AGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFT 526

Query: 412 YSVVMHGLRRE-GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           Y +V  GL    G + EA D V EM++KGF P      +L + LC     D   K +   
Sbjct: 527 YKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLV 586

Query: 471 LNKGCAVNVVNFTS----LIRGFCQKGDLEEALSLLDDMYLCKK 510
           + K       NF+     +IRGF +    ++AL+ L  +   +K
Sbjct: 587 MEKA------NFSQNEVVMIRGFLKIRKFQDALATLGGLLDSRK 624



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 175/386 (45%), Gaps = 19/386 (4%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM-YHHGCKPNTVS 376
           G     K+++ +M  + C  D       ++ + +    ++   +++ M    G   +T+ 
Sbjct: 101 GSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLL 160

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   LN L    K      + +T   +   P+  T+++++  L +  ++  A  V+ EM 
Sbjct: 161 YNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMS 220

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
             G  P       L+Q    EG MDGA +  ++ L+ GC V  V    L+ GFC++G +E
Sbjct: 221 SYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIE 280

Query: 497 EALSLLDDMYLCKK----------------DPDTVTYTTIIDALSKNGRVEEATELMMKM 540
           EALS +D+M    K                 PD  TY  +ID+L   G+++EA  L+ +M
Sbjct: 281 EALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREM 340

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYL 598
              G    V+TY T+I  +C+  ++E+  ++ ++M  +   R +  YN +I+ LC    +
Sbjct: 341 EISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRV 400

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           +EA +++ +++    K D  T + ++  +  +G    A  +   M +    PD+     +
Sbjct: 401 QEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTL 460

Query: 659 SERLILEGKSEEADTLMLRFVERGHI 684
              L   G+ E A  L+     +G +
Sbjct: 461 IGGLCKAGRVEVASRLLRSIQLKGMV 486


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 163/617 (26%), Positives = 278/617 (45%), Gaps = 50/617 (8%)

Query: 98  ELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
            L+NL+ S+ P  I A+     D + AL FF W  ++  ++H+   +  ML IL      
Sbjct: 67  SLKNLIPSIAPSHISALFALNLDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYL 126

Query: 158 QGAKRVLRLMAR---------------RGIECRPEAFSY---------LMVAYSRAGKLR 193
           + A+ +  LM +               R +  R +AF +         L++  SR   + 
Sbjct: 127 RIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMID 186

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
               V   M    V PN+   NT ++       + +A  ++ ++  AG++ +  TY  LI
Sbjct: 187 EMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLI 246

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            GYC    +  A  +   MP KGC  ++VSY  ++   C+ +R+                
Sbjct: 247 LGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRV---------------- 290

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                  +EA +L +QM +  C P V TYT ++   C++G   +A  M ++M    C+PN
Sbjct: 291 -------DEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPN 343

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             +YT  +  LC +    +A++++N   E+   P+ +TY+ ++ G  ++G  + A +++ 
Sbjct: 344 VHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILS 403

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            M      P     N LI   CR   +  A   + + L +    NVV +  LI G C++G
Sbjct: 404 LMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEG 463

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           DL  A  LL  M      PD  TY+  ID L K G VEEA  L   +  KG+    V Y 
Sbjct: 464 DLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYS 523

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           T+I  YC+VG+V D   LL+KMLS         YN +I+  C     +EA  ++  +++ 
Sbjct: 524 TLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKR 583

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
             +  A T  +L+++ L       A+ +  +M +    PD+ +           G+ ++A
Sbjct: 584 DIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDA 643

Query: 672 DTLMLRFVERGHIQPKS 688
           + L+ +   +G I P +
Sbjct: 644 EVLICKMNAKG-IMPDT 659



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 135/566 (23%), Positives = 244/566 (43%), Gaps = 57/566 (10%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           AK++L  M  +G+      ++ L+  Y + G   +A+ +LS+M+    +PN    N  I 
Sbjct: 363 AKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELIL 422

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
               G  + KA+  L +M    + PNV+TYN LI G C    +  A KL+  M   G  P
Sbjct: 423 GFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVP 482

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D+ +Y   +  LCK                       +G +EEA+ L   + + G   + 
Sbjct: 483 DEWTYSVFIDTLCK-----------------------RGLVEEARSLFESLKEKGIKANE 519

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           V Y+ +++G+C+VG++   + +L +M   GC PN+++Y + ++G C      EAR +++ 
Sbjct: 520 VIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDI 579

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             +    P A TY++++  L ++ +  +A D+  +M+  G  P        I + C  G+
Sbjct: 580 MIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGR 639

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +  A+  + +   KG   + + +T  I  + + G ++ A  +L  M+    +P   TY+ 
Sbjct: 640 LKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSC 699

Query: 520 IIDALSKNGRVEEAT------------------------------ELMMKMLSKGLVPTV 549
           +I  LS N + +E +                              +L  KM   G  P  
Sbjct: 700 LIKHLS-NAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNA 758

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGK 607
            TY   I   C+VG +E   +L + M  K +      YN ++   C  G   EA + L  
Sbjct: 759 NTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDI 818

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           ++         +C +L+    ++G    A +V C         D  + K + + L+ +G 
Sbjct: 819 MIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGL 878

Query: 668 SEEADTLMLRFVERG-HIQPKSEEHL 692
           S++   L      +G  I PK+   L
Sbjct: 879 SDKCSDLFGIMETQGCQIHPKTYSML 904



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 253/583 (43%), Gaps = 54/583 (9%)

Query: 151 LSKTKLCQG---AKRV---LRLMARRGIE-CRPEAFSYLMVAYS--RAGKLRNAMYVLSM 201
           +S T L  G   A+RV   L+L ++   + C P   +Y ++ ++  + G+   A+ +   
Sbjct: 275 VSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKE 334

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +    PN+      I  L   +    A + L  M   G+ P+V+TYN LI GYC    
Sbjct: 335 MTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGL 394

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSN 312
              A++++  M    CSP+  +Y  ++   C+ K I +   L+ KM         V  + 
Sbjct: 395 SASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNI 454

Query: 313 LFHDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L H Q   G +  A +L++ M++ G +PD  TY+  ++  C+ G +++A+ + + +   G
Sbjct: 455 LIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG 514

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            K N V Y+  ++G C  GK  + R +++        PN+ITY+ ++ G  +E    EA 
Sbjct: 515 IKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEAR 574

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            +V  M+K+   P      +LI +L ++ + D A     + L+ G   +V  +T+ I  +
Sbjct: 575 LLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAY 634

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C  G L++A  L+  M      PDT+ YT  IDA  + G ++ A  ++ +M   G  P+ 
Sbjct: 635 CSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSY 694

Query: 550 VTYRTVIHRYCQVG---------------------------RV--EDLLKLLEKMLSKQK 580
            TY  +I                                  RV  E  L L  KM ++  
Sbjct: 695 YTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKM-AEHG 753

Query: 581 C---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
           C      Y + I  LC  G LE A ++   +       +    + L+      G+   A 
Sbjct: 754 CAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAI 813

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
           +    M     +P L  CK +   L  EG  E+A  +   F++
Sbjct: 814 RWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQ 856



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 117/539 (21%), Positives = 209/539 (38%), Gaps = 117/539 (21%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  +++   K  L   A  +L LM      C P A +Y  L++ + R   +  AM +L
Sbjct: 380 VTYNALIDGYCKKGLSASALEILSLMESN--NCSPNARTYNELILGFCRGKNIHKAMSLL 437

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP--------------- 244
             M +  + PN++  N  IH       L  A + L  M  +G+ P               
Sbjct: 438 HKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKR 497

Query: 245 --------------------NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
                               N + Y+ LI GYC + ++ D   L+D+M   GC P+ ++Y
Sbjct: 498 GLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITY 557

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDS-------------NLFHD--------------- 316
            +++   CKEK  KE R L++ M+                NL  D               
Sbjct: 558 NSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLS 617

Query: 317 -------------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                               GR+++A+ L+ +M+  G +PD + YT  ++ + R G +D 
Sbjct: 618 TGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDG 677

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR----------------------- 394
           A  +L++M+  GC+P+  +Y+  +  L  N K  E                         
Sbjct: 678 AFGILKRMHEVGCEPSYYTYSCLIKHL-SNAKPKEVSSSSELSDLSSGVASNDFSNCWRR 736

Query: 395 -------EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
                  ++     E    PNA TY   + GL + G L  A  +   M +KG  P     
Sbjct: 737 VDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIY 796

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N L+   C+ G    A +++   +      ++ +   L+ G   +G+ E+A  +      
Sbjct: 797 NSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQ 856

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
           C+ + D + +  +ID L K G  ++ ++L   M ++G      TY  +I  +  +  ++
Sbjct: 857 CEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/286 (20%), Positives = 106/286 (37%), Gaps = 41/286 (14%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  +Y   +         + A+ ++  M  +GI      ++  + AY R G +  A  +L
Sbjct: 623 DVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGIL 682

Query: 200 SMMQKAAVAPNLLICNTAIHVL--------------------VVGNKLAKALR------- 232
             M +    P+    +  I  L                    V  N  +   R       
Sbjct: 683 KRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFT 742

Query: 233 --FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
                +M   G  PN  TY   I G C +  ++ A +L D M  KG SP++  Y +++G 
Sbjct: 743 LDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGC 802

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFH------------DQGRIEEAKELVNQMSQMGCIPD 338
            C+     E    ++ M+ + +L H            D+G  E+AK +     Q     D
Sbjct: 803 SCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYD 862

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            + +  +++G  + G  D+   +   M   GC+ +  +Y+  + G 
Sbjct: 863 EMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/529 (27%), Positives = 255/529 (48%), Gaps = 29/529 (5%)

Query: 104 RSLKPRQICAVLRSQADERVA--LQFFY--WADRQWRYRHDPIVYYMMLEILSKTKLCQG 159
           RS  P+    +L+   + RVA     F+     R        IV+ M++    + K    
Sbjct: 125 RSPSPKSTLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDD 184

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A     +M  +G+  + E F+ ++  + +  +      + + M +  +   +   N  I+
Sbjct: 185 AFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMIN 244

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
           VL    KL KA  F+  M+  G+ PNV+TYN +I GYC   R++ A  ++D M  +G  P
Sbjct: 245 VLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEP 304

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D  +Y +++  +CK                        G++EEA  ++ +M ++G +P  
Sbjct: 305 DSYTYGSLISGMCK-----------------------GGKLEEASGILEKMKEIGLLPTA 341

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           VTY  +++G+C  G+L +A     +M      P   +Y   ++ L   GK  EA  MI  
Sbjct: 342 VTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKD 401

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             +    P++ITY+++++G  R G   +A ++  EM+ KG  PT V    LI  L +  +
Sbjct: 402 MGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNR 461

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           M  A    ++ + +G + +++ F +LI G C  G+L+ A +LL +M      PD VTY T
Sbjct: 462 MKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNT 521

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           ++    + G+VEEA EL+ +M  +G+ P  ++Y T+I  Y + G + D   + ++MLS  
Sbjct: 522 LMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG 581

Query: 580 KCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
              T   YN +I+ LC     + A ++L +++      D ST   L+E 
Sbjct: 582 FNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEG 630



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 232/465 (49%), Gaps = 15/465 (3%)

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
           T + + ++ LI+  C+L R  DA +  D M  KG  P   ++  ++    K  + + V  
Sbjct: 163 TKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWV 222

Query: 303 LMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           L  +M                N+   +G++++AK+ +  M  +G  P+VVTY  V++G+C
Sbjct: 223 LYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYC 282

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
             G ++ A+ +L  M + G +P++ +Y + ++G+C  GK  EA  ++   +E    P A+
Sbjct: 283 SRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAV 342

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY+ ++ G   +G L +A     EMV++   PT    NLLI +L  EGKMD A   +++ 
Sbjct: 343 TYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM 402

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
            + G   + + +  LI G+C+ G+ ++A +L D+M      P  VTYT++I  LSK  R+
Sbjct: 403 GDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRM 462

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQV 588
           + A +L  K++ +G  P ++ +  +I  +C  G ++    LL++M  +        YN +
Sbjct: 463 KAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTL 522

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           ++  C  G +EEA ++L ++ R   + D  + + L+  Y  +G    A+ +   M +   
Sbjct: 523 MQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGF 582

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQ 693
            P L     + + L    + + A+ L+   V +G I P    +  
Sbjct: 583 NPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKG-ITPDDSTYFS 626



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 179/378 (47%), Gaps = 62/378 (16%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           +GA+ VL +M  RG+E  P++++Y  L+    + GKL  A  +L  M++  + P  +  N
Sbjct: 288 EGARMVLDIMKNRGVE--PDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYN 345

Query: 216 TAI-----------------------------------HVLVVGNKLAKALRFLERMQLA 240
           T I                                   H L +  K+ +A   ++ M  +
Sbjct: 346 TLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS 405

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           GI P+ +TYN LI GYC     K A  L DEM  KG  P  V+Y +++  L K  R+K  
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
            DL EK++ +                       G  PD++ + A+++G C  G LD+A  
Sbjct: 466 DDLFEKIIRE-----------------------GASPDLIMFNALIDGHCANGNLDRAFA 502

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L++M      P+ V+Y   + G C  GK  EARE++   +     P+ I+Y+ ++ G  
Sbjct: 503 LLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYS 562

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           + G +++A  +  EM+  GF PT +  N LIQ LC+  + D A++ ++E ++KG   +  
Sbjct: 563 KRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDS 622

Query: 481 NFTSLIRGFCQKGDLEEA 498
            + SLI G  +  D  EA
Sbjct: 623 TYFSLIEGIGKVDDSSEA 640


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 166/620 (26%), Positives = 287/620 (46%), Gaps = 41/620 (6%)

Query: 106 LKPRQICAVLR-----SQADERVALQFFYWA-DRQWRYRHDPIVYYMMLEILSKTKLCQG 159
           L P  + ++LR      +   ++ L FFYW+  R       P  +  +   L    L   
Sbjct: 79  LSPAALSSLLRRCNSSPRLHPKLLLDFFYWSRTRLAPSAPAPDAFAHLAVSLCAAGLYPQ 138

Query: 160 AKRVLRLMAR-------------RGIEC-----RPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           A  +L  M R             R +       RP     L+  Y + G++R+   V+ +
Sbjct: 139 ANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVLL 198

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+   +AP+L  CN  +  L+  + L    +    M+ AGI+P+V TY+ LI+ YC +  
Sbjct: 199 MKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRD 258

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD----- 316
           ++ A K+++EM   GCS + V+Y T++G LC+   I+E     ++M  D  L  D     
Sbjct: 259 LESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEM-EDYGLVPDGFTYG 317

Query: 317 --------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                   +GR ++AK L+++MS  G +P+VV Y+ +++GF R G  D+A K++++M   
Sbjct: 318 AIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAA 377

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G +PN ++Y   + GLC  G+   A  ++    +  +  + +TY++V+ G  R+    EA
Sbjct: 378 GVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEA 437

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             ++ EM K G  P     +++I  LC+ G+ + A   +++ +  G   N   +  LI G
Sbjct: 438 FLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISG 497

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +C++G    A   L  M      PD   Y ++I  LS  G+++EA E   +ML KG  P 
Sbjct: 498 YCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPN 557

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
             TY  +IH Y   G +E   +LL +ML+         Y Q++E       LE+    L 
Sbjct: 558 DFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLK 617

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
            +L      D     +++ +  + G    A  V   +    L+PD  +   +        
Sbjct: 618 SMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAA 677

Query: 667 KSEEADTLMLRFVERGHIQP 686
             E+A  L+    ++G I+P
Sbjct: 678 DMEKAVGLLDEMAKKG-IEP 696



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 149/578 (25%), Positives = 260/578 (44%), Gaps = 32/578 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++E   K +  + AK+V+  M   G       ++ L+    RAG +  A    
Sbjct: 242 DVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYK 301

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+   + P+       I+ L    +  +A   L+ M  AG+ PNV+ Y+ LI G+   
Sbjct: 302 KEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQ 361

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
               +A K++ EM   G  P+K++Y  ++  LCK  R+     ++++M       D+  +
Sbjct: 362 GNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTY 421

Query: 315 H-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +        Q   EEA  L+N+M + G  P+V TY+ ++NG C++GE ++A  +L+QM  
Sbjct: 422 NLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIA 481

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G KPN   Y   ++G C  G    A E +     E  TP+   Y+ ++ GL   GK+ E
Sbjct: 482 DGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDE 541

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A +   EM++KGF P       LI      G ++ A++ + + LN G   N   +  ++ 
Sbjct: 542 AIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILE 601

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G+ +  +LE+  S L  M      PD   Y  +I  LS +G ++ A  ++  +   GLVP
Sbjct: 602 GYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVP 661

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
             + Y ++I  +C+   +E  + LL++M  K  +   + YN +I+  C    +  A  I 
Sbjct: 662 DSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIF 721

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP--------------- 650
             ++      +  T   L++ Y   G    A  +   M    + P               
Sbjct: 722 NSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNS 781

Query: 651 -DLKLCKKVSERLILEGKS--EEADTLMLRFVERGHIQ 685
            DL+    ++E +I  G +     +TL+  F +RG +Q
Sbjct: 782 GDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQ 819



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 224/472 (47%), Gaps = 38/472 (8%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
            Y +++  L +    + A  +L  M   G+  +P AF Y  L+  Y R G    A   L 
Sbjct: 455 TYSIIINGLCQIGESERASGLLEQMIADGL--KPNAFVYAPLISGYCREGSFSLACETLK 512

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M +  + P+L   N+ I  L    K+ +A+ + + M   G  PN  TY  LI GY    
Sbjct: 513 KMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAG 572

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCK---EKRIKEVRDLMEK-MVNDSNLF- 314
            ++ A +L+ +M   G +P+   Y  ++ GY      EK    ++ ++EK ++ D+ L+ 
Sbjct: 573 NLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYG 632

Query: 315 ------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                    G ++ A  +++ + + G +PD + Y ++++GFC+  ++++A  +L +M   
Sbjct: 633 IVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKK 692

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G +P    Y A ++G C +     AR + N+   +   PN +TY+ ++ G  + G + +A
Sbjct: 693 GIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDA 752

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            D+  EM+ +G  P     ++L       G +  A    +E + +G A+ + +F +L+ G
Sbjct: 753 IDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI-ISSFNTLVHG 811

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA--------------- 533
           FC++G L+E +  L  M      P  +T   I+  L + G++ EA               
Sbjct: 812 FCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHR 871

Query: 534 -----TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
                + L   M+++GLVP  V +  +I  +C+ G ++  L L + +++K +
Sbjct: 872 DTDHLSSLFTDMINQGLVPLDVIH-NMIQSHCKQGYLDKALMLHDALVAKGR 922



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 153/355 (43%), Gaps = 45/355 (12%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
            +Y  +LE   K+   +     L+ M  +G+      +  ++   S +G ++ A+ VLS+
Sbjct: 594 FIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSV 653

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           ++K  + P+ LI  + I        + KA+  L+ M   GI P +  YN LI G+C    
Sbjct: 654 IEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDD 713

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           I  A  + + +  KG  P+ V+Y T++   CK                        G I 
Sbjct: 714 ISHARNIFNSIICKGLPPNCVTYTTLIDGYCK-----------------------AGDIR 750

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +A +L N+M   G  PD   Y+ +  G    G+L QA  + ++M   G    + S+   +
Sbjct: 751 DAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIIS-SFNTLV 809

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE------- 434
           +G C  GK  E  + ++   ++   P+ +T   ++ GL   GKLSEA  +  E       
Sbjct: 810 HGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNAS 869

Query: 435 -------------MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
                        M+ +G  P  V I+ +IQS C++G +D A       + KG A
Sbjct: 870 HRDTDHLSSLFTDMINQGLVPLDV-IHNMIQSHCKQGYLDKALMLHDALVAKGRA 923


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 241/464 (51%), Gaps = 12/464 (2%)

Query: 176 PEAFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P  F++ + A +  R G+   A+ +L  M +    P+ ++  T IH L     + +A   
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           L  M L G   +V T++ +++G C L R+++A +L+D M  KGC P  ++Y  ++  LC+
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276

Query: 294 EKRIKEVRDLMEKMVN-DSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            ++  E R ++ ++   +  LF+        +G++ EA EL   M   GC PD  TY+ +
Sbjct: 277 VRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 336

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G C++G +  A ++L++M   G  PN V+YT  L+  C NG   + R ++     +  
Sbjct: 337 MHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 396

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           T N+  Y+ +++ L ++G++ EA  +++EM  +G  P     N +I  LC   +M+ A+ 
Sbjct: 397 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 456

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             +  L +G   N + + ++I    + G  ++A+ L  +M L     D V+Y  +I A+ 
Sbjct: 457 MFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 516

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--T 583
           K+G V+ +  L+ +M  KG+ P  V+Y  +I   C+  RV D L+L ++ML++       
Sbjct: 517 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIV 576

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            YN +I  LC  G++  A  +L K+       D  T ++L+  +
Sbjct: 577 TYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWH 620



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 206/422 (48%), Gaps = 32/422 (7%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           + A+ V R+M +    C P   +Y  L+    R  +   A  +L  + +     N+++ N
Sbjct: 247 EAARLVDRMMTK---GCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFN 299

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
           T I   +   KLA+A    E M L G  P+  TY+ L+ G C L RI  A++L+ EM  K
Sbjct: 300 TVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKK 359

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
           G +P+ V+Y  V+   CK     + R L+E+M       + QG                 
Sbjct: 360 GFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG----------------- 402

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
                 Y  ++   C+ G +D+A  ++Q+M   GC P+  SY   +  LC+N +  EA  
Sbjct: 403 ------YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 456

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           M     EE    N ITY+ ++H L R+G+  +A  + +EM+  G     V  N LI+++C
Sbjct: 457 MFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMC 516

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           ++G +D +   ++E   KG   N V++  LI   C++  + +AL L   M      PD V
Sbjct: 517 KDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIV 576

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY T+I+ L K G +  A  L+ K+ ++ + P ++TY  +I  +C+V  ++D   LL + 
Sbjct: 577 TYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRA 636

Query: 576 LS 577
           ++
Sbjct: 637 MA 638



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 169/342 (49%), Gaps = 17/342 (4%)

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVA 208
           L++ KL + A  +   M  +G  C+P+A +Y  LM    + G++ +A+ +L  M+K   A
Sbjct: 306 LAEGKLAE-ATELYETMGLKG--CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFA 362

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           PN++     +H              LE M   G+T N   YN +I   C   R+ +A+ L
Sbjct: 363 PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL 422

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHD--- 316
           I EM  +GC+PD  SY T++ +LC  ++++E   + E ++ +         + + H    
Sbjct: 423 IQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLR 482

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            GR ++A  L  +M   GC  DVV+Y  ++   C+ G +D++  +L++M   G KPN VS
Sbjct: 483 DGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVS 542

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   ++ LC   +  +A E+      +   P+ +TY+ +++GL + G +  A +++ ++ 
Sbjct: 543 YNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLH 602

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
            +   P  +  N+LI   C+   +D A   +   +   C V 
Sbjct: 603 NENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVG 644



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 42/389 (10%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P   T+       CR+G  D+A  +L+ M  HGC P+ V Y   ++ LC  G   EA  +
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +N         +  T+  V+ G+   G++ EA  +V  M+ KG  P  +    L+Q LCR
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
             + D A+      L +   +NVV F ++I G   +G L EA  L + M L    PD  T
Sbjct: 277 VRQADEARAM----LGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 332

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y+ ++  L K GR+  A  L+ +M  KG  P VVTY  V+H +C+ G  +D   LLE+M 
Sbjct: 333 YSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 392

Query: 577 SK----------------------------------QKCRT---AYNQVIENLCSFGYLE 599
           +K                                  Q C     +YN +I +LC+   +E
Sbjct: 393 AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 452

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           EA  +   +L     A+  T + ++ + L  G    A ++A  M       D+     + 
Sbjct: 453 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 512

Query: 660 ERLILEGKSEEADTLMLRFVERGHIQPKS 688
           + +  +G  + +  L+    E+G I+P +
Sbjct: 513 KAMCKDGNVDRSLVLLEEMAEKG-IKPNN 540



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 68/131 (51%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ + K      +  +L  MA +GI+    +++ L+    +  ++R+A+ + 
Sbjct: 504 DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELS 563

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    +AP+++  NT I+ L     +  AL  LE++    + P+++TYN LI  +C +
Sbjct: 564 KQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKV 623

Query: 260 HRIKDAIKLID 270
             + DA  L++
Sbjct: 624 RLLDDAAMLLN 634


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 174/708 (24%), Positives = 312/708 (44%), Gaps = 82/708 (11%)

Query: 68  LEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA---DERVA 124
           ++E+     L++ +  ++   +A  P L   L      L P  I ++  S+A      V 
Sbjct: 12  IQEENLEQQLIQTITTIL---NATKPSLSA-LAPYAAHLSPSLISSIFASKALSSHPSVL 67

Query: 125 LQFFYWADRQ----------------------WRYRHDPIVYYMMLEILSKTKLCQGAKR 162
           L  F WA +                       +R+        +++  +S  +  +  K 
Sbjct: 68  LNVFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFRHYMFSDAKSLLISFISSDRQHELHKL 127

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           +L    R   E   E     + AY +  +   A  + + M++    PNLL CNT ++ LV
Sbjct: 128 ILH-PTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLV 186

Query: 223 ---VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                + +  A + L+     G+ PN  ++N LI GYC   ++KDA+  +++M   GC P
Sbjct: 187 RYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVP 246

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------------------------- 311
           D VSY T++  L K + ++E RDL+  M +                              
Sbjct: 247 DTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVI 306

Query: 312 -------------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
                              N F + G+I+EA  + ++M +M  +PDVVTY  +++G  + 
Sbjct: 307 EIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQW 366

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
            +  +   ++++M   G K N V+Y   L  +C  G   EA   ++  EE   +P+ +TY
Sbjct: 367 RDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTY 426

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           + ++    + GK+ +A  ++ EM  KG       +N ++  LC E K+D A   +     
Sbjct: 427 NTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASK 486

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +G  ++ V++  LI G+ +    + AL+L D+M   +  P T+TY ++I  L ++ +V++
Sbjct: 487 RGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQ 546

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIE 590
           A + + +ML  GLVP   TY  +IH +C  G VE   +   +M+        Y  N ++ 
Sbjct: 547 AIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLR 606

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC  G LE+A K+   ++      D  T + ++ S   +G    AY +   M  + L P
Sbjct: 607 GLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGP 666

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVF 698
           D    K +   L   G+ +EA+   L+ VE G +  ++ +  + Q V 
Sbjct: 667 DQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVL 714



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 168/388 (43%), Gaps = 35/388 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y ++L+ + K      A   L  M   G+      ++ L+ AY +AGK+  A  ++
Sbjct: 387 NAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMM 446

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    +  +    NT +H L V  KL +A   L      G   + ++Y  LI GY   
Sbjct: 447 DEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKD 506

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            +   A+ L DEM  +   P  ++Y +V+G LC+ +++ +  D + +M+ +         
Sbjct: 507 EKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTY 566

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               + F  +G +E+A +  N+M +    PDV T   ++ G CR G L++A K+   +  
Sbjct: 567 NIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVS 626

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G   + V+Y   ++ LC  GK   A +++   E +   P+  TY V++  L   G++ E
Sbjct: 627 KGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKE 686

Query: 428 ACDVVREMVKKG-----------------------FFPTPVEINLLIQSLCREGKMDGAK 464
           A +   +MV+ G                       F    +  +  I  LC + K   A 
Sbjct: 687 AEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAM 746

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQK 492
               E   +G A+N   + +L+ G  ++
Sbjct: 747 HLFVEVTKEGVALNKYTYLNLMEGLIKR 774



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 121/275 (44%), Gaps = 25/275 (9%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  R I      ++ ++    ++ K+  A+  L+ M +  + P+    N  IH   +   
Sbjct: 519 MKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGN 578

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + KA +F   M      P+V T N L++G C    ++ A+KL + +  KG   D V+Y T
Sbjct: 579 VEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNT 638

Query: 287 VMGYLCKEKRIKEVRDLM-----EKMVNDSNLFH-------DQGRIEEAKELVNQMSQMG 334
           ++  LCKE + +   DL+     +K+  D   +        D GRI+EA+E   +M + G
Sbjct: 639 IISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESG 698

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            + D            +  +L + + +L           +++Y+  +N LC+  K  +A 
Sbjct: 699 IVHD------------QNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAM 746

Query: 395 EMINTSEEEWWTPNAITYSVVMHGL-RREGKLSEA 428
            +     +E    N  TY  +M GL +R    S+A
Sbjct: 747 HLFVEVTKEGVALNKYTYLNLMEGLIKRRKSTSKA 781


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 233/465 (50%), Gaps = 55/465 (11%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  DP  +  +L       LC  +  +LR + + GI   PEA + ++   SR   L  A+
Sbjct: 200 FSSDPASFDFLL-------LCLPSAPLLRRLRQYGISPSPEACNAVL---SRL-PLDEAI 248

Query: 197 YVLSMMQKAAVAPNLLIC--NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
            +   +      P+  +C  N  +  L    ++  A +  + M  A   P+V+TY  LI 
Sbjct: 249 ELFQEL------PHKNVCSYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIH 299

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G+C L  +++A+KL+DEM   G  P+   Y +V+  LC                      
Sbjct: 300 GHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLC---------------------- 337

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
            D+G I +A  +V  M Q   I D   YT V++GFC  G+L  A++   +M   G   + 
Sbjct: 338 -DKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDG 396

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWT----PNAITYSVVMHGLRREGKLSEACD 430
           V+YT  +NGLC   +  EA +++    +E W      + +TY+V++ G  + GK++EA  
Sbjct: 397 VTYTTMINGLCRAVELEEAEKLL----QEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQ 452

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +   MV++G  P  V    L   LC++G +  A + + E  NKG  +N   + SLI G C
Sbjct: 453 MHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLC 512

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           + G LE+A+  + DM      PD  TYTT+IDAL K+G ++ A  L+ +ML KG+ PT+V
Sbjct: 513 KAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIV 572

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLC 593
           TY  +++ +C  GRVE   KLL+ ML K     A  YN +++  C
Sbjct: 573 TYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYC 617



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 177/378 (46%), Gaps = 12/378 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           +  VY  ++ +L        A RV+  M +R +      ++ ++  +   G L +A    
Sbjct: 325 NATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWF 384

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             MQ+  +A + +   T I+ L    +L +A + L+ M    +  + +TY  LI GYC  
Sbjct: 385 DEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKR 444

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            ++ +A ++ + M  +G +P+ V+Y  +   LCK+  ++   +L+ +M N          
Sbjct: 445 GKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTY 504

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               N     G +E+A   +  M      PDV TYT +++  C+ G+LD+A  +LQ+M  
Sbjct: 505 NSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLD 564

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G KP  V+Y   +NG C +G+    +++++   E+   PNA TY+ +M     E  +  
Sbjct: 565 KGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKS 624

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
             ++ + M  +   P     N+LI+  C+   M  A  F  E + KG  +   ++++LIR
Sbjct: 625 TTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIR 684

Query: 488 GFCQKGDLEEALSLLDDM 505
              +K    EA  L  DM
Sbjct: 685 LLNKKKKFVEARELFHDM 702



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 182/373 (48%), Gaps = 14/373 (3%)

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++EA EL  ++       +V +Y  ++   C  G +  A+++  +M      P+ V+Y  
Sbjct: 244 LDEAIELFQELPHK----NVCSYNILLKALCDAGRVKDARQLFDEM---ASAPDVVTYGI 296

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G C  G+   A ++++        PNA  Y+ V+  L  +G +S+A  VV +MV++ 
Sbjct: 297 LIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRK 356

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
                     ++   C +G +  A+++  E   KG A + V +T++I G C+  +LEEA 
Sbjct: 357 VILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAE 416

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            LL +M+  + D D VTYT +ID   K G++ EA ++   M+ +G+ P VVTY  +    
Sbjct: 417 KLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGL 476

Query: 560 CQVGRVEDLLKLLEKMLSK----QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
           C+ G V+   +LL +M +K      C   YN +I  LC  GYLE+A + +  +     K 
Sbjct: 477 CKQGDVQAANELLHEMSNKGLELNAC--TYNSLINGLCKAGYLEQAMRTMADMDTACLKP 534

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           D  T   L+++    G    A+ +   M ++ + P +     +     + G+ E    L+
Sbjct: 535 DVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLL 594

Query: 676 LRFVERGHIQPKS 688
              +E+ +I P +
Sbjct: 595 DWMLEK-NIHPNA 606



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 157/378 (41%), Gaps = 25/378 (6%)

Query: 130 WADRQWR--YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS 187
           W D   R     D + Y  M+  L +    + A+++L+ M  R ++     ++ L+  Y 
Sbjct: 383 WFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYC 442

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           + GK+  A  + + M +  V PN++        L     +  A   L  M   G+  N  
Sbjct: 443 KRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNAC 502

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN LI G C    ++ A++ + +M      PD  +Y T++  LCK              
Sbjct: 503 TYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCK-------------- 548

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     G ++ A  L+ +M   G  P +VTY  ++NGFC  G ++  KK+L  M  
Sbjct: 549 ---------SGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLE 599

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
               PN  +Y + +   C         E+          PN  TY++++ G  +   + E
Sbjct: 600 KNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKE 659

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A     EM++KGF  T    + LI+ L ++ K   A++   +   +G       +   I 
Sbjct: 660 ALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYID 719

Query: 488 GFCQKGDLEEALSLLDDM 505
               + +LE  L+L D++
Sbjct: 720 LNFNEDNLESTLALCDEL 737


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 233/447 (52%), Gaps = 28/447 (6%)

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
           A+  P+++  N  +    V  +L  A R +  M +    P+  TYN LI+G C   R  +
Sbjct: 114 ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPM---EPDTYTYNTLIRGLCGRGRTDN 170

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAK 324
           A+ ++D+M  +GC PD V+Y  ++   CK    K+                       A 
Sbjct: 171 ALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQ-----------------------AV 207

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +L+++M   GC PD+VTY  VVNG C+ G +D A + L+ +  +GC+PNTVSY   L GL
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C   +  +A +++     +   PN +T+++++  L R G +  A +++ ++ K G  P  
Sbjct: 268 CTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNS 327

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           +  N ++ + C++ KMD A  F++  ++ GC  ++V++ +L+   C+ G+++ A+ LL  
Sbjct: 328 LSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 387

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           +      P  ++Y T+ID L+K G+ EEA EL+ +M++KGL P ++TY T+    C+ GR
Sbjct: 388 LKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGR 447

Query: 565 VEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           +E+ +K   K+  +  +     YN ++  LC       A  +   ++      + ST  +
Sbjct: 448 IEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTI 507

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLI 649
           L+E    +G+   A ++   + +R ++
Sbjct: 508 LIEGLAYEGLVKEAREMMAELCSRGVV 534



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 237/493 (48%), Gaps = 34/493 (6%)

Query: 78  VREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRY 137
           + E  RL+E  +   P   G    L++ L     CA  R+    RV              
Sbjct: 72  LEEAIRLVESMAGLEPSAAGPCAALIKKL-----CASGRTAEARRVLASC---------- 116

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
             D + Y  M+     T     A+R++  M        P+ ++Y  L+      G+  NA
Sbjct: 117 EPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME-----PDTYTYNTLIRGLCGRGRTDNA 171

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + VL  M +    P+++     +      +   +A++ L+ M+  G  P+++TYN ++ G
Sbjct: 172 LAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNG 231

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---- 311
            C   R+ DA++ +  +P  GC P+ VSY  V+  LC  +R ++   LM +M        
Sbjct: 232 ICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPN 291

Query: 312 --------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   +    +G +E A E+++Q+ + GC P+ ++Y  +++ FC+  ++D+A   ++
Sbjct: 292 VVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 351

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M   GC P+ VSY   L  LC  G+   A E+++  +++  TP  I+Y+ V+ GL + G
Sbjct: 352 LMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 411

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           K  EA +++ EMV KG  P  +  + +   LCREG+++ A K   +  + G   N V + 
Sbjct: 412 KTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYN 471

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           +++ G C++     A+ L   M      P+  TYT +I+ L+  G V+EA E+M ++ S+
Sbjct: 472 AILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSR 531

Query: 544 GLVPTVVTYRTVI 556
           G+V   +  +  I
Sbjct: 532 GVVSKTLVNKGAI 544



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 223/475 (46%), Gaps = 49/475 (10%)

Query: 199 LSMMQKAAVAPNLL-----ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL-TYNCL 252
           L++    AVAPN +       N  + VLV    L +A+R +E M  AG+ P+       L
Sbjct: 39  LNLAYAGAVAPNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESM--AGLEPSAAGPCAAL 96

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           IK  C   R  +A ++     L  C PD +SY  ++   C                    
Sbjct: 97  IKKLCASGRTAEARRV-----LASCEPDVMSYNAMVAGYCV------------------- 132

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                G+++ A+ LV  M      PD  TY  ++ G C  G  D A  +L  M   GC P
Sbjct: 133 ----TGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVP 185

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           + V+YT  L   C      +A ++++   ++   P+ +TY+VV++G+ +EG++ +A + +
Sbjct: 186 DVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFL 245

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           + +   G  P  V  N++++ LC   + + A+K M E   KG   NVV F  LI   C++
Sbjct: 246 KSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRR 305

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G +E A+ +LD +      P++++Y  I+ A  K  +++ A   +  M+S G  P +V+Y
Sbjct: 306 GLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSY 365

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
            T++   C+ G V+  ++LL ++  K       +YN VI+ L   G  EEA ++L +++ 
Sbjct: 366 NTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVT 425

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD--------LKLCKK 657
              + D  T   +      +G    A K  C++ +  + P+        L LCK+
Sbjct: 426 KGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKR 480



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 190/375 (50%), Gaps = 13/375 (3%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            GR  EA+ ++       C PDV++Y A+V G+C  G+LD A++++  M     +P+T +
Sbjct: 103 SGRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPM---EPDTYT 154

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   + GLC  G++  A  +++        P+ +TY++++    +     +A  ++ EM 
Sbjct: 155 YNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR 214

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            KG  P  V  N+++  +C+EG++D A +F++   + GC  N V++  +++G C     E
Sbjct: 215 DKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWE 274

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +A  L+ +M    + P+ VT+  +I  L + G VE A E++ ++   G  P  ++Y  ++
Sbjct: 275 DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPIL 334

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           H +C+  +++  +  +E M+S   C     +YN ++  LC  G ++ A ++L ++     
Sbjct: 335 HAFCKQKKMDRAMAFVELMVS-SGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 393

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
                + + +++     G    A ++   M  + L PD+     +S  L  EG+ EEA  
Sbjct: 394 TPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIK 453

Query: 674 LMLRFVERGHIQPKS 688
              +  + G I+P +
Sbjct: 454 AFCKVQDMG-IRPNT 467



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 9/187 (4%)

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTV-TYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +R   ++GDLEEA+ L++ M     +P        +I  L  +GR  EA  ++       
Sbjct: 63  LRVLVRRGDLEEAIRLVESM--AGLEPSAAGPCAALIKKLCASGRTAEARRVL-----AS 115

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKI 604
             P V++Y  ++  YC  G++++  +L+  M  +    T YN +I  LC  G  + A  +
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPMEPDTYT-YNTLIRGLCGRGRTDNALAV 174

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
           L  +LR     D  T  +L+E+   +     A K+   M ++   PD+     V   +  
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234

Query: 665 EGKSEEA 671
           EG+ ++A
Sbjct: 235 EGRVDDA 241


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/561 (27%), Positives = 272/561 (48%), Gaps = 45/561 (8%)

Query: 156 LCQGAKR--VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI 213
           LC+  K    L L+  +  +    AFS L+    +A +L  A+ +L  M      PN++ 
Sbjct: 256 LCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVC 312

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
            N+ ++ L    ++ +A    + M+ +G + +V+TYN L+KG C L RI +A + ++ M 
Sbjct: 313 FNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMR 372

Query: 274 -LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN----DSNLF------------HD 316
             +GCSP+ V++ T++  LC   R+ +  ++ E+MV       N F             D
Sbjct: 373 RTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGD 432

Query: 317 QGRIEE-------------------AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
             R+E+                   + E+   M Q+ C P +VTY  +V G  + G +  
Sbjct: 433 SRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQV-CRPTLVTYNTLVTGLSKSGMVRD 491

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  +L+ M   G  P+ +++ + L+GLC   + L+A  +   + E    PN +TYS ++ 
Sbjct: 492 ALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLID 551

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           GL +  K+ EA  ++ +MV+ G     V  + ++  L + G+M+ A   +++  + GC  
Sbjct: 552 GLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP 611

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           + V + +LI GF ++  L EA+ LL +M      P  VTYTT+   L ++GR +EA E++
Sbjct: 612 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 671

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCS 594
             M ++G  P  +TY +++   C+ GRV + L   EKM   +       AY+ +I+ LC 
Sbjct: 672 DYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCK 731

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            G ++EA + L +++R     D  T  +L+    + G      ++ C M  R    D+  
Sbjct: 732 AGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYA 791

Query: 655 CKKVSERLILEGKSEEADTLM 675
              +     L+G+   A  L+
Sbjct: 792 YNAMINAYCLKGEFSAAYALL 812



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 252/530 (47%), Gaps = 54/530 (10%)

Query: 132 DRQWRYR-----HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMV 184
           +R+WR       H P V ++M+++                       CRP   +Y  L+ 
Sbjct: 445 EREWRSSSSWPIHSPEVDFLMVQV-----------------------CRPTLVTYNTLVT 481

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
             S++G +R+A+ +L  M ++ ++P+++  N+ +  L    ++  A    +R    G  P
Sbjct: 482 GLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRP 541

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           NV+TY+ LI G   + ++ +A++L+ +M   GC  + V+Y TV+  L K           
Sbjct: 542 NVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLK----------- 590

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                        GR+E+A  ++ QM   GC+PD VTY  +++GF +   L +A  +L++
Sbjct: 591 ------------VGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 638

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G  P+ V+YT   +GLC +G+  EA E+++        PNAITYS ++ GL + G+
Sbjct: 639 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 698

Query: 425 LSEACDVVREMVKKGFF-PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           ++EA     +M +     P  +  + LI  LC+ G++D A +F++  +  G   +VV F+
Sbjct: 699 VTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFS 758

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            LI G C  G ++  L L   M       D   Y  +I+A    G    A  L+ +M + 
Sbjct: 759 ILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTH 818

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGK 603
           G+    VT+  VI   C   R+++ +     +    +   +YN +I +L +    E+A +
Sbjct: 819 GIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALE 878

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
           +L  ++      DA     +++     G P +A K+   M +R   PDL+
Sbjct: 879 LLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLR 928



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 225/469 (47%), Gaps = 16/469 (3%)

Query: 138  RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
            R + + Y  +++ LSK      A ++L  M   G       +S ++    + G++ +A+ 
Sbjct: 540  RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 599

Query: 198  VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            VL  M+ A   P+ +  NT I       +L +A+  L  M  AG  P+V+TY  L  G C
Sbjct: 600  VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 659

Query: 258  DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND------- 310
               R  +A++++D M  +GC+P+ ++Y +++  LCK  R+ E     EKM  D       
Sbjct: 660  RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 719

Query: 311  ---SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
               S L       GRI+EA E + +M + G IPDVVT++ ++NG C  G +D   ++   
Sbjct: 720  IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCG 779

Query: 365  MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
            M   GCK +  +Y A +N  C  G+   A  ++   +      N +T+ +V+  L    +
Sbjct: 780  MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDR 839

Query: 425  LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
            + EA      + +       +  N LI SL    + + A + ++  +  G + +  N+ +
Sbjct: 840  IDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMT 897

Query: 485  LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
            ++ G  + G  E A  LL +M      PD  TYT +I  LSK  ++  A +   +ML K 
Sbjct: 898  VMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKN 957

Query: 545  LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLC 593
            L P  + Y ++I  +C+  +V+D  KLL      +   T Y+ ++++LC
Sbjct: 958  LKPDAIVYSSLIDAFCKADKVDDAWKLLRSS-GIEPTITMYSTMVDSLC 1005



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 206/429 (48%), Gaps = 32/429 (7%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ L+    +AG++ +A        +    P ++  +T I  L   N++ K  + LE M 
Sbjct: 4   YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  PN +TYN L+       R K+A  L++ M   GC P+ +++  ++  LCKE    
Sbjct: 64  GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKE---- 119

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                              G IE A  +V++M   G +PDV  +T +++  C +G +D+A
Sbjct: 120 -------------------GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEA 160

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
               QQ+   G  P+ V+Y   ++GL   G+   A  ++    E + +P   T+++ + G
Sbjct: 161 WFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDG 220

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L + G L+ A +    M + G  P  V  + LI  LC+ GK+D A   +++   K     
Sbjct: 221 LSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAG 277

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +  F+SL+ G CQ   LEEA+ LL  M      P+ V + ++++ L +  RV+EA EL  
Sbjct: 278 MFAFSSLLHGLCQAHRLEEAIQLLKAMPCV---PNVVCFNSLMNGLCQARRVDEAFELFD 334

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSF 595
            M   G    V+TY  ++   C++ R+ +  + +E M   + C      ++ +I+ LC+ 
Sbjct: 335 VMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNA 394

Query: 596 GYLEEAGKI 604
           G + +A ++
Sbjct: 395 GRVNQAWEV 403



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 156/618 (25%), Positives = 276/618 (44%), Gaps = 72/618 (11%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGK 191
           Q+ +R   + Y  +++ L +        ++L  MA RG  C P A +Y  L+ A    G+
Sbjct: 29  QFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRG--CAPNAVTYNTLVNALLGQGR 86

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
            + A  +L  M      P L+     I  L    ++  A R ++ M   G  P+V  +  
Sbjct: 87  AKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTV 146

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEKMV 308
           L+   C+L R+ +A     ++ L G +PD V+Y T++  L K  R++    V  L+ +  
Sbjct: 147 LLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESF 206

Query: 309 NDSNLF---------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
           +   +F            G +  A E  + M Q G  P+ VTY A+++G C+ G+LD A 
Sbjct: 207 SSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIAL 266

Query: 360 KMLQQ------MYH-----HG------------------CKPNTVSYTAFLNGLCHNGKS 390
            +L+       M+      HG                  C PN V + + +NGLC   + 
Sbjct: 267 GLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRV 326

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK-KGFFPTPVEINL 449
            EA E+ +  +E   + + ITY++++ GL +  ++ EA   V  M + +G  P  V  + 
Sbjct: 327 DEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFST 386

Query: 450 LIQSLCREGKMDGAKKFMQECLN-KGCAVNVVNFTSLIRGFCQKGD---LEEALSLL--- 502
           LIQ LC  G+++ A +  +  +  +G + N   +  L+ G C+ GD   LE+    +   
Sbjct: 387 LIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLER 446

Query: 503 ---------------DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
                          D + +    P  VTY T++  LSK+G V +A  L+  M+  GL P
Sbjct: 447 EWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSP 506

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKI 604
            V+T+ +V+   C+  R+ D   + ++ L ++ CR     Y+ +I+ L     ++EA ++
Sbjct: 507 DVITFNSVLDGLCKEQRILDAHNVFKRAL-ERGCRPNVVTYSTLIDGLSKMAKMDEALQL 565

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
           L K++    +A+  T   +V+  L  G    A  V  +M +   +PD      + +    
Sbjct: 566 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 625

Query: 665 EGKSEEADTLMLRFVERG 682
             +  EA  L+   +E G
Sbjct: 626 RQRLREAVGLLREMLEAG 643



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 213/445 (47%), Gaps = 29/445 (6%)

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           ++TYN LI G C   R+ DA     +    G  P  V+Y TV+  LC++  + +   L+E
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 306 KMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
           +M                N    QGR +EA  L+ +M+  GC P+++T+  ++ G C+ G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           E++ A +++ +M   G  P+   +T  L+ LC  G+  EA           +TP+A+TY+
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGF-FPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
            ++ GL + G+L EA  +V +++ + F  PT     + +  L + G + GA +F      
Sbjct: 181 TMVDGLYKAGRL-EAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            G + N V + +LI G C+ G L+ AL LL D            +++++  L +  R+EE
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGLLRDK---NSQAGMFAFSSLLHGLCQAHRLEE 296

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVI 589
           A +L+  M     VP VV + ++++  CQ  RV++  +L + M  +  C      YN ++
Sbjct: 297 AIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVM-KESGCSADVITYNILL 352

Query: 590 ENLCSFGYLEEAGKILGKVLRT-ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           + LC    + EA + +  + RT     +  T   L++   N G    A++V  RM     
Sbjct: 353 KGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEG 412

Query: 649 IPDLKLCKKVSERLILEGKSEEADT 673
           I       + +   +LEG  +  D+
Sbjct: 413 ISP----NRFTYAFLLEGLCKAGDS 433



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 3/145 (2%)

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILG 606
           +VTY  +I+  C+ GRV D      K +    +     Y+ VI+ LC    +++  K+L 
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
           ++       +A T + LV + L +G    A+ +  RM      P+L     + + L  EG
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 667 KSEEADTLMLRFVERGHIQPKSEEH 691
           + E A  ++   V+RG + P  E H
Sbjct: 121 EIEAAFRVVDEMVDRGFV-PDVEIH 144


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 237/507 (46%), Gaps = 32/507 (6%)

Query: 172 IECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           + C   +F+ LM  +    KL  A+     + K    P ++  NT +H L V +++++AL
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
               +M      PNV+T+  L+ G C   R+ +A+ L+D M   G  P++++Y T++  +
Sbjct: 172 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPD 338
           CK        +L+ KM   S++  +              GR  +A  L  +M +    PD
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPD 287

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           +VTY  ++NGFC  G    A+++LQ+M      P+ V+++A +N     GK  EA E+ +
Sbjct: 288 IVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYD 347

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                   P+ +TYS ++ G  ++ +L  A  +      KG  P  +  N LI   CR  
Sbjct: 348 EMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAK 407

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           ++D   K + E    G   N + +T+LI GFCQ GDL  A  LL +M      P+ VT  
Sbjct: 408 RVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCN 467

Query: 519 TIIDALSKNGRVEEATELMMKMLSK------------GLVPTVVTYRTVIHRYCQVGRVE 566
           T++D L  NG++++A E M K + K            G+ P V TY  +I      G+  
Sbjct: 468 TLLDGLCDNGKLKDALE-MFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFL 526

Query: 567 DLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           +  +L E+M  +        Y+ +I+ LC    L+EA ++   +   +   D  T + L+
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLI 586

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPD 651
             Y   G+     ++ C M  R ++ D
Sbjct: 587 TGYCKAGMVDDGLELFCEMGQRGIVAD 613



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 243/516 (47%), Gaps = 43/516 (8%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L   +     L +A+ +   M ++   P+++     + V+V   +    +   ++M++  
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           +  N  ++  L+K +C   ++  A+    ++   G  P  V++ T++  LC E RI E  
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
           DL  +M                           C P+VVT+T ++NG CR G + +A  +
Sbjct: 172 DLFHQM---------------------------CKPNVVTFTTLMNGLCREGRVVEAVAL 204

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE-EWWTPNAITYSVVMHGLR 420
           L +M   G +PN ++Y   ++G+C  G ++ A  ++   EE     PN + Y+ ++ GL 
Sbjct: 205 LDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLW 264

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           ++G+ S+A ++  EM +K  FP  V  N +I   C  G+   A++ +QE L +    +VV
Sbjct: 265 KDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVV 324

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            F++LI  F ++G   EA  L D+M      P TVTY+++ID   K  R++ A  +    
Sbjct: 325 TFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLT 384

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYL 598
            +KG  P ++T+ T+I  YC+  RV+D +KLL +M           Y  +I   C  G L
Sbjct: 385 PTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 444

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKG---IPLLAYKV---------ACRMFNR 646
             A  +L +++ +    +  TC+ L++   + G     L  +K          A R FN 
Sbjct: 445 NAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFN- 503

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            + PD++    +   LI EGK  EA+ L      RG
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRG 539



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 220/443 (49%), Gaps = 24/443 (5%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA-VAPNLLICNTAI 218
           A  +L  M   G++     +  ++    + G   +A+ +L  M++ + + PN++I NT I
Sbjct: 201 AVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTII 260

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
             L    + + A      MQ   I P+++TYNC+I G+C   R  DA +L+ EM  +  +
Sbjct: 261 DGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKIN 320

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKEL 326
           PD V++  ++    KE +  E  +L ++M+  S +            F  Q R++ A+ +
Sbjct: 321 PDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHM 380

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
                  GC PD++T+  ++ G+CR   +D   K+L +M   G   NT++YT  ++G C 
Sbjct: 381 FYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 440

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK-------- 438
            G    A++++         PN +T + ++ GL   GKL +A ++ + M K         
Sbjct: 441 VGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASR 500

Query: 439 ---GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              G  P     N+LI  L  EGK   A++  +E  ++G   + + ++S+I G C++  L
Sbjct: 501 PFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           +EA  + D M      PD VT+ T+I    K G V++  EL  +M  +G+V   +TY T+
Sbjct: 561 DEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITL 620

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK 578
           I+ + +V  ++  L + ++M+S 
Sbjct: 621 IYGFRKVDNIDGALDIFQEMISS 643



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 210/416 (50%), Gaps = 36/416 (8%)

Query: 173 ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           E  P+  +Y  ++  +  +G+  +A  +L  M +  + P+++  +  I+  V   K  +A
Sbjct: 283 EIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEA 342

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
               + M    I P+ +TY+ +I G+C  +R+  A  +    P KGCSPD +++ T++  
Sbjct: 343 EELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAG 402

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            C+ KR+                       ++  +L+++M++ G + + +TYT +++GFC
Sbjct: 403 YCRAKRV-----------------------DDGIKLLHEMTEAGLVANTITYTTLIHGFC 439

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE------- 403
           +VG+L+ A+ +LQ+M   G  PN V+    L+GLC NGK  +A EM    ++        
Sbjct: 440 QVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDAS 499

Query: 404 ----WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
                  P+  TY++++ GL  EGK  EA ++  EM  +G  P  +  + +I  LC++ +
Sbjct: 500 RPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 559

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +D A +      +K  + +VV F +LI G+C+ G +++ L L  +M       D +TY T
Sbjct: 560 LDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYIT 619

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           +I    K   ++ A ++  +M+S G+ P  +T R ++        +E  + +LE +
Sbjct: 620 LIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/391 (24%), Positives = 192/391 (49%), Gaps = 23/391 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  M+     +     A+++L+ M  R I      FS L+ A+ + GK   A  + 
Sbjct: 287 DIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELY 346

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M   ++ P+ +  ++ I      N+L  A          G +P+++T+N LI GYC  
Sbjct: 347 DEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRA 406

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R+ D IKL+ EM   G   + ++Y T++   C+   +   +DL+++M++          
Sbjct: 407 KRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTC 466

Query: 312 ----NLFHDQGRIEEAKELVNQM--SQM---------GCIPDVVTYTAVVNGFCRVGELD 356
               +   D G++++A E+   M  S+M         G  PDV TY  ++ G    G+  
Sbjct: 467 NTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFL 526

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A+++ ++M H G  P+T++Y++ ++GLC   +  EA +M ++   + ++P+ +T++ ++
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLI 586

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            G  + G + +  ++  EM ++G     +    LI    +   +DGA    QE ++ G  
Sbjct: 587 TGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVY 646

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            + +   +++ G   K +LE A+++L+D+ +
Sbjct: 647 PDTITIRNMLTGLWSKEELERAVAMLEDLQM 677



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 134/341 (39%), Gaps = 42/341 (12%)

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +GF  +  LD A  +   M      P+ + +   +  +   G+      +    E     
Sbjct: 54  SGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMP 113

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            NA +++++M       KL  A     ++ K GF PT                       
Sbjct: 114 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPT----------------------- 150

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
                       VV F +L+ G C +  + EAL L   M  CK  P+ VT+TT+++ L +
Sbjct: 151 ------------VVTFNTLLHGLCVEDRISEALDLFHQM--CK--PNVVTFTTLMNGLCR 194

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RT 583
            GRV EA  L+ +ML  GL P  +TY T++   C++G     L LL KM           
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVV 254

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            YN +I+ L   G   +A  +  ++       D  T + ++  +   G    A ++   M
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEM 314

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
             R + PD+     +    + EGK  EA+ L    + R  I
Sbjct: 315 LERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSII 355


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 241/482 (50%), Gaps = 21/482 (4%)

Query: 167 MARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           M +RG  C+P   +Y  L+ A  ++     AM VL  M+     PN++  N  I+ +   
Sbjct: 178 MLQRG--CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 235

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            ++  A   L R+   G  P++++Y  ++KG C   R  D   L  EM  K C P++V++
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 295

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
             ++ + C+   ++    ++++M                N    QGR+++A + +N M  
Sbjct: 296 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 355

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            GC PD ++YT V+ G CR G  + AK++L +M    C PN V++  F+  LC  G   +
Sbjct: 356 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 415

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A ++I    E   +   +TY+ ++HG   +G++  A ++   +  +   P  +    L+ 
Sbjct: 416 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLT 472

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC   ++D A + + E + K C +N V F  L+  FCQKG +EEA+ L++ M      P
Sbjct: 473 GLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 532

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           + +T+ T++D ++K+   EEA EL+  ++SKG+    +TY +V+    +  R E+ +++L
Sbjct: 533 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQML 592

Query: 573 EKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
             +  +  +     YN+++  LC     ++A      ++      + ST  +L+E   ++
Sbjct: 593 HAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHE 652

Query: 631 GI 632
           G+
Sbjct: 653 GL 654



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 223/429 (51%), Gaps = 30/429 (6%)

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S M +    P+++     +  +   +   +A+  L+ M+  G TPN++TYN +I G C  
Sbjct: 176 STMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 235

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R+ DA ++++ +   G  PD VSY TV+  LC  +R  +V+ L  +MV+          
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK-------- 287

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                          C+P+ VT+  +V  FCR G +++A ++LQQM  HGC PNT     
Sbjct: 288 ---------------CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNI 332

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +N +C  G+  +A + +N        P+ I+Y+ V+ GL R G+   A +++ EMV+K 
Sbjct: 333 VINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 392

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  V  N  I  LC++G ++ A K ++     GC+V +V + +L+ GFC +G ++ AL
Sbjct: 393 CPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSAL 452

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            L +++     +P+T+TYTT++  L    R++ A EL+ +M+ K      VT+  ++  +
Sbjct: 453 ELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFF 509

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           CQ G VE+ ++L+ +M+ +  C      +N +++ +      EEA ++L  ++      D
Sbjct: 510 CQKGFVEEAMELVNQMM-EHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLD 568

Query: 617 ASTCHVLVE 625
             T   +V+
Sbjct: 569 TITYSSVVD 577



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 203/408 (49%), Gaps = 24/408 (5%)

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
           +GC P  V+Y  ++  +CK     E                       A  ++++M   G
Sbjct: 181 RGCQPSVVTYTVLLEAVCKSSGFGE-----------------------AMNVLDEMRAKG 217

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C P++VTY  ++NG CR G +D AK++L ++  +G +P+ VSYT  L GLC   +  + +
Sbjct: 218 CTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVK 277

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            +     ++   PN +T+ +++    R G +  A  V+++M + G  P     N++I ++
Sbjct: 278 VLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAI 337

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C++G++D A  F+      GC  + +++T+++RG C+ G  E A  LL +M      P+ 
Sbjct: 338 CKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNE 397

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VT+ T I  L + G +E+A +L+  M   G    +VTY  ++H +C  GRV+  L+L   
Sbjct: 398 VTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN 457

Query: 575 MLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
           +  +    T Y  ++  LC    L+ A ++L ++++     +A T +VLV  +  KG   
Sbjct: 458 LPCEPNTIT-YTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVE 516

Query: 635 LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            A ++  +M      P+L     + + +  +  SEEA  L+   V +G
Sbjct: 517 EAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 564



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 208/427 (48%), Gaps = 19/427 (4%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA--YSRAGK 191
            + ++ D + Y  +L+ L   +     K +   M  +  +C P   ++ M+   + R G 
Sbjct: 250 SYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK--KCVPNEVTFDMLVRFFCRGGM 307

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +  A+ VL  M +    PN  +CN  I+ +    ++  A  FL  M + G  P+ ++Y  
Sbjct: 308 VERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTT 367

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---- 307
           +++G C   R + A +L+ EM  K C P++V++ T +  LC++  I++   L+E M    
Sbjct: 368 VLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYG 427

Query: 308 -----VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                V  + L H    QGR++ A EL N +    C P+ +TYT ++ G C    LD A 
Sbjct: 428 CSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAA 484

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++L +M    C  N V++   ++  C  G   EA E++N   E   TPN IT++ ++ G+
Sbjct: 485 ELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGI 544

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            ++    EA +++  +V KG     +  + ++  L RE + + A + +    + G    V
Sbjct: 545 TKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKV 604

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
             +  ++   C++ + ++A+     M      P+  TY  +I+ L+  G ++EA  ++ +
Sbjct: 605 GMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSE 664

Query: 540 MLSKGLV 546
           + +KG++
Sbjct: 665 LYAKGVL 671


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 247/488 (50%), Gaps = 16/488 (3%)

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           L+++        +L+ +   G       F+ L+ +++   ++ N + +L    +    P+
Sbjct: 65  LTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE--NELGFKPD 122

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
               N A++ LV  NKL        +M   GI  +V T+N LIK  C  H+++ AI +++
Sbjct: 123 TNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLE 182

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQG 318
           EM   G  PD++++ T+M    +E  +     + ++M+               N F  +G
Sbjct: 183 EMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEG 242

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           R+EEA   V ++S+ G  PD VT+ ++VNGFCR+G ++ A  ++  M   G  P+  +Y 
Sbjct: 243 RVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYN 302

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           + ++G+C  G+  +A E++        +PN +TY+ ++  L +E ++  A D+ R +V K
Sbjct: 303 SLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSK 362

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P     N LIQ LC     D A +  +E  NKGC  +   ++ LI   C +  L+EA
Sbjct: 363 GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 422

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L LL +M       + V Y T+ID L K+ R+E+A E+  +M   G+  + VTY T+I  
Sbjct: 423 LMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDG 482

Query: 559 YCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            C+  RVE+  +L+++M+ +  +  +  YN ++   C  G +E+AG I+  +     + D
Sbjct: 483 LCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542

Query: 617 ASTCHVLV 624
             T   L+
Sbjct: 543 IFTYGTLI 550



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 239/475 (50%), Gaps = 22/475 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   + ++++ L K    + A  +L  MA  G++     F+ LM  +   G L  A+   
Sbjct: 157 DVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALK-- 214

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVG----NKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             M+K  +    L+ N ++ VLV G     ++ +ALRF+  +   G +P+ +T+N L+ G
Sbjct: 215 --MKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNG 272

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV----NDS 311
           +C +  + DA+ ++D M  KG  PD  +Y +++  +CK    ++  +++++M+    + +
Sbjct: 273 FCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPN 332

Query: 312 NLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            + ++        +  IE A +L   +   G +PDV T+  ++ G C     D A +M +
Sbjct: 333 TVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFE 392

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M + GCKP+  +Y+  ++ LC+  +  EA  ++   E      NA+ Y+ ++ GL +  
Sbjct: 393 EMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSR 452

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           ++ +A ++  +M   G   + V  N LI  LC+  +++ A + M + + +G   +   + 
Sbjct: 453 RIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYN 512

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           SL+  FC+ GD+E+A  ++  M     +PD  TY T+I  L + GRV+ A++L+  +  K
Sbjct: 513 SLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMK 572

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQ--VIENLCSFG 596
           G+V T   Y  VI       R ++ ++L  +M+ K     A     V   LC+ G
Sbjct: 573 GIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGG 627



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/490 (23%), Positives = 225/490 (45%), Gaps = 31/490 (6%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY-- 181
           AL+F      +  +  D + +  ++    +      A  ++  M  +G +  P+ ++Y  
Sbjct: 247 ALRFVLEVSEEG-FSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFD--PDVYTYNS 303

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+    + G+   A+ +L  M     +PN +  NT I  L   N++  A      +   G
Sbjct: 304 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG 363

Query: 242 ITPNVLTYNCLIKGYCDLHRIKD-AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           + P+V T+N LI+G C L + +D A+++ +EM  KGC PD+ +Y  ++  LC E+R+KE 
Sbjct: 364 LLPDVCTFNTLIQGLC-LSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKE- 421

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                                 A  L+ +M   GC  + V Y  +++G C+   ++ A++
Sbjct: 422 ----------------------ALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEE 459

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +  QM   G   ++V+Y   ++GLC N +  EA ++++    E   P+  TY+ ++    
Sbjct: 460 IFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFC 519

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           R G + +A D+V+ M   G  P       LI  LCR G++D A K ++    KG  +   
Sbjct: 520 RVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPH 579

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL-SKNGRVEEATELMMK 539
            +  +I+    +   +E + L  +M      PD +T+  +   L +  G ++EA +  ++
Sbjct: 580 AYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVE 639

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLE 599
           ML KG++P   ++  +    C +   + L++L+  ++ K +       +I          
Sbjct: 640 MLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERETSMIRGFLKIRKFN 699

Query: 600 EAGKILGKVL 609
           +A   LG +L
Sbjct: 700 DALANLGGIL 709



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 187/398 (46%), Gaps = 66/398 (16%)

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
            L++++ +G  PN  T+  LI+ + + H I++ +K+++     G  PD   Y   +  L 
Sbjct: 77  LLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENE--LGFKPDTNFYNIALNALV 134

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           ++ ++K V  L  KMVN+                       G + DV T+  ++   C+ 
Sbjct: 135 EDNKLKLVEMLHSKMVNE-----------------------GIVLDVSTFNVLIKALCKA 171

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
            +L  A  ML++M +HG KP+                                    IT+
Sbjct: 172 HQLRPAILMLEEMANHGLKPD-----------------------------------EITF 196

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           + +M G   EG L+ A  + ++M+  G   T V + +L+   C+EG+++ A +F+ E   
Sbjct: 197 TTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSE 256

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +G + + V F SL+ GFC+ G++ +AL ++D M     DPD  TY ++I  + K G  E+
Sbjct: 257 EGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEK 316

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE---DLLKLL-EKMLSKQKCRTAYNQV 588
           A E++ +M+ +   P  VTY T+I   C+   +E   DL ++L  K L    C   +N +
Sbjct: 317 AIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVC--TFNTL 374

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           I+ LC     + A ++  ++     K D  T  +L++S
Sbjct: 375 IQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDS 412



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 5/154 (3%)

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           T++  L+++   +  T L+ ++ S G +P   T+ T+I  +     +E+LLK+LE  L  
Sbjct: 60  TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGF 119

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
           +     YN  +  L     L+    +  K++      D ST +VL+++         A  
Sbjct: 120 KPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAIL 179

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
           +   M N  L PD     +++   +++G  EE D
Sbjct: 180 MLEEMANHGLKPD-----EITFTTLMQGFIEEGD 208


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/558 (27%), Positives = 258/558 (46%), Gaps = 55/558 (9%)

Query: 169 RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
           R+G+      FS  + A+ + GK+ +A+ +   M+K  V+PN++  N  IH L     L 
Sbjct: 306 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 365

Query: 229 KALRFLERMQLAGI-----------------------------------TPNVLTYNCLI 253
           +A RF E+M   G+                                   TPN + YN LI
Sbjct: 366 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 425

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND--- 310
            GYC +  + DA+++  +M  KG +P+ V+  +++   CK  ++++   ++E+M++    
Sbjct: 426 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 485

Query: 311 ------SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                 + + H      R E A   + +M      P+    T +V G C+ G+   A ++
Sbjct: 486 INPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 545

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             ++   G   N V+  A ++GLC  G   EA  ++    E  +  + ITY+ ++ G  +
Sbjct: 546 WFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCK 605

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           EGK+ E   +  EMVK+G  P     NLLI  +CR GK+D A     EC ++    NV  
Sbjct: 606 EGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYT 665

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +  +I G+C+   +EE   L  ++     + ++V Y T+I A  +NG   EA +L   M 
Sbjct: 666 YGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMR 725

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-----LSKQKCRTAYNQVIENLCSFG 596
           SKG+ PT  TY ++IH  C +GR+ED   L+++M     L    C TA   +I   C  G
Sbjct: 726 SKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA---LIGGYCKLG 782

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            +++   +L ++       +  T  V+++ Y   G    A K+   M  + ++PD     
Sbjct: 783 QMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYN 842

Query: 657 KVSERLILEGKSEEADTL 674
            ++     EGK EE   L
Sbjct: 843 VLTNGFCKEGKIEEGKLL 860



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 161/649 (24%), Positives = 291/649 (44%), Gaps = 54/649 (8%)

Query: 75  HPLVREVCRLIELRSAWSPKLEG-ELRNLLRSLKPRQICAV---LRSQADERVALQFFYW 130
           H L++ V  ++      +P L+  + + L+  L P Q  +V   +R   + + AL FFY+
Sbjct: 114 HALLKSVTSILS-----NPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYF 168

Query: 131 ADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL-RLMAR-----------RGIECRPE- 177
           A     +R     Y +++  L  +     A+ +L RL+ R           R IE     
Sbjct: 169 ASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAM 228

Query: 178 --------------AFSYLMVAYS---RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
                         A   L+  Y    R    RNA+ V   +    V P +  C   +  
Sbjct: 229 ADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSS 288

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
           LV  N+L K+    E M+  G++P+V  ++  I  +C   +++DAI+L  +M   G SP+
Sbjct: 289 LVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPN 347

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVN 328
            V+Y  ++  LCK   + E     EKMV D             N      +  EA  ++ 
Sbjct: 348 VVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLK 407

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +  + G  P+ V Y  +++G+C++G L  A ++   M   G  PN+V+  + + G C  G
Sbjct: 408 ETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIG 467

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  +A  ++       ++ N   ++ ++H L    +   A   +REM+ +   P    + 
Sbjct: 468 QMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLT 527

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            L+  LC+EGK   A +     L KG   N+V   +LI G C+ G+++EA+ LL  M   
Sbjct: 528 TLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLER 587

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
               D +TY T+I    K G+VEE  +L  +M+ +G+ P   TY  +IH  C++G++++ 
Sbjct: 588 GFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEA 647

Query: 569 LKLLEKMLSKQKCRTAYNQ--VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           + L  +  S+      Y    +I+  C    +EE  K+  ++L    + ++   + L+ +
Sbjct: 648 VNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRA 707

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           Y   G  + A+K+   M ++ + P       +   +   G+ E+A  L+
Sbjct: 708 YCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLI 756



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 248/504 (49%), Gaps = 14/504 (2%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K      A R    M + G+      +S L+    +  K   A  VL  
Sbjct: 349 VTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKE 408

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
             +    PN ++ NT I        L  ALR    M   GI PN +T N +I+G+C + +
Sbjct: 409 TLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQ 468

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV------NDSNL-- 313
           ++ A  +++EM  +G S +  ++ T++ +LC   R +     + +M+      ND  L  
Sbjct: 469 MEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTT 528

Query: 314 ----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                  +G+  +A EL  ++ + G   ++VT  A+++G C+ G + +A ++L++M   G
Sbjct: 529 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 588

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
              + ++Y   ++G C  GK  E  ++     ++   P+  TY++++HG+ R GKL EA 
Sbjct: 589 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 648

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           ++  E   +   P      ++I   C+  K++  +K   E L +   +N V + +LIR +
Sbjct: 649 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 708

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ G+  EA  L DDM      P T TY+++I  +   GR+E+A  L+ +M  +GL+P V
Sbjct: 709 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 768

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
           V Y  +I  YC++G+++ ++ +L++M S      +  Y  +I+     G ++ A K+L +
Sbjct: 769 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 828

Query: 608 VLRTASKADASTCHVLVESYLNKG 631
           ++      D  T +VL   +  +G
Sbjct: 829 MVGKGIVPDTVTYNVLTNGFCKEG 852



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 217/443 (48%), Gaps = 12/443 (2%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  + +VY  +++   K      A R+   M  +GI       + ++  + + G++  A 
Sbjct: 414 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAE 473

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M     + N     T IH L + ++   ALRFL  M L  + PN      L+ G 
Sbjct: 474 CILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGL 533

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   +  DA++L   +  KG   + V+   ++  LCK   ++E   L++KM+    +   
Sbjct: 534 CKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDK 593

Query: 317 ------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                       +G++EE  +L  +M + G  PD  TY  +++G CR+G+LD+A  +  +
Sbjct: 594 ITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE 653

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
                  PN  +Y   ++G C   K  E  ++      +    N++ Y+ ++    R G 
Sbjct: 654 CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGN 713

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             EA  +  +M  KG  PT    + LI  +C  G+M+ AK  + E   +G   NVV +T+
Sbjct: 714 TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA 773

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G+C+ G +++ +++L +M      P+ +TYT +ID  SK+G ++ A +L+ +M+ KG
Sbjct: 774 LIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG 833

Query: 545 LVPTVVTYRTVIHRYCQVGRVED 567
           +VP  VTY  + + +C+ G++E+
Sbjct: 834 IVPDTVTYNVLTNGFCKEGKIEE 856



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 178/380 (46%), Gaps = 12/380 (3%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  +P  +  ++  L      + A R LR M  R +       + L+    + GK  +A+
Sbjct: 484 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 543

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   + +     NL+  N  IH L     + +A+R L++M   G   + +TYN LI G 
Sbjct: 544 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGC 603

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RDLMEKM 307
           C   ++++  KL  EM  +G  PD  +Y  ++  +C+  ++ E          RDL+  +
Sbjct: 604 CKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNV 663

Query: 308 VNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                +   +    +IEE ++L  ++       + V Y  ++  +CR G   +A K+   
Sbjct: 664 YTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 723

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G  P T +Y++ ++G+C+ G+  +A+ +I+   +E   PN + Y+ ++ G  + G+
Sbjct: 724 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 783

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + +  +V++EM      P  +   ++I    + G M  A K + E + KG   + V +  
Sbjct: 784 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 843

Query: 485 LIRGFCQKGDLEEALSLLDD 504
           L  GFC++G +EE   L +D
Sbjct: 844 LTNGFCKEGKIEEGKLLAED 863



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 167/360 (46%), Gaps = 38/360 (10%)

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           ++  G  P V T T +++   +  EL+++  + + M   G  P+   ++  +N  C  GK
Sbjct: 270 LANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGK 328

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A ++    E+   +PN +TY+ ++HGL + G L EA     +MVK G   T +  ++
Sbjct: 329 VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSV 388

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI  L +  K + A   ++E L KG   N V + +LI G+C+ G+L +AL +  DM    
Sbjct: 389 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 448

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
            +P++VT  +II    K G++E+A  ++ +MLS+G       + T+IH  C   R E  L
Sbjct: 449 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 508

Query: 570 KLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           + L +ML +  +        ++  LC  G   +A ++  ++L     A+  T + L+   
Sbjct: 509 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHG- 567

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
                                     LCK         G  +EA  L+ + +ERG +  K
Sbjct: 568 --------------------------LCKT--------GNMQEAVRLLKKMLERGFVLDK 593



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 7/248 (2%)

Query: 447 INLLIQSLCREGKMDG---AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
           ++LLI   C + +  G   A    +   NKG    V   T L+    +  +LE++  + +
Sbjct: 244 VDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFE 303

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
            M      PD   ++T I+A  K G+VE+A +L   M   G+ P VVTY  +IH  C+ G
Sbjct: 304 TMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHG 362

Query: 564 RVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
            +++  +  EKM+      T   Y+ +I  L       EA  +L + L      +    +
Sbjct: 363 NLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYN 422

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
            L++ Y   G    A ++   M ++ + P+      + +     G+ E+A+ ++   + R
Sbjct: 423 TLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSR 482

Query: 682 GH-IQPKS 688
           G  I P +
Sbjct: 483 GFSINPGA 490


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 255/529 (48%), Gaps = 36/529 (6%)

Query: 76  PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLR---SQADERVALQFFYWAD 132
           P++  +   I++ S   P L   L+ +L SL P  +  ++            L FF W  
Sbjct: 37  PILTTISEAIKV-SPTKP-LHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLS 94

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR-LMARRG-----------IECRPE--- 177
            Q  +R     Y  M   L   K+   A+ +L+ +++R+G           +E R     
Sbjct: 95  TQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQS 154

Query: 178 --AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
              FS LM AY+ +G   +A+    +++K  +      C      L+  N  + A  F E
Sbjct: 155 NLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYE 214

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            +   G  P+V  +N L+   C  H+I +A  L  E+  +G  P  VS+ T++   CK  
Sbjct: 215 EILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSG 274

Query: 296 RIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTY 342
            + +   L   M+ ++ +F D             +G++++A +L  +M   G +P+ VT+
Sbjct: 275 NLDQGFRLKRFMM-ENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTF 333

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           T ++NG C  G  D   ++ QQM   G KP+ ++Y   +NGLC  G   EA++++    +
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQ 393

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               P+  TY++++ G  +EG L  A ++ +EMVK+G     V    LI   CREG++  
Sbjct: 394 RGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIE 453

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A++ ++E L  G   +   +T +I GFC+KGD++    LL +M      P  VTY  +++
Sbjct: 454 AERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLN 513

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
            L K G+++ A  L+  ML+ G+VP  +TY  ++  +C+ G  ED  KL
Sbjct: 514 GLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKL 562



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 184/383 (48%), Gaps = 21/383 (5%)

Query: 128 FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS 187
           FY       Y  D   + +++  L K      A+ +   + +RG+     +F+ L+  Y 
Sbjct: 212 FYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYC 271

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           ++G L     +   M +  V P++   +  I+ L    +L  A +    M   G+ PN +
Sbjct: 272 KSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV 331

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           T+  LI G+C   R    +++  +M  KG  PD ++Y T++  LCK   ++E + L+ +M
Sbjct: 332 TFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM 391

Query: 308 VNDS--------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                        +  D    +G +E A E+  +M + G   D V +TA+++GFCR G++
Sbjct: 392 TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQV 451

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
            +A++ L++M   G KP+  +YT  ++G C  G      +++   + +   P  +TY+V+
Sbjct: 452 IEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVL 511

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           ++GL ++G++  A  ++  M+  G  P  +  N+L++  C+ G  +   K   E   KG 
Sbjct: 512 LNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSE---KGL 568

Query: 476 AVNVVNFTSLIRGFCQKGDLEEA 498
             +  ++TSLI      GDL + 
Sbjct: 569 VQDYGSYTSLI------GDLRKT 585



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 136/263 (51%), Gaps = 3/263 (1%)

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
           S A     E++  G+ P   + N+L+  LC+E K++ A+    E   +G    VV+F +L
Sbjct: 207 SPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTL 266

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G+C+ G+L++   L   M   +  PD  TY+ +I+ L K G++++A +L ++M  +GL
Sbjct: 267 INGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGL 326

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGK 603
           VP  VT+ T+I+ +C  GR +  +++ ++ML K  +     YN +I  LC  G L EA K
Sbjct: 327 VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKK 386

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           ++ ++ +   K D  T  +L++    +G    A ++   M    +  D      +     
Sbjct: 387 LVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFC 446

Query: 664 LEGKSEEADTLMLRFVERGHIQP 686
            EG+  EA+  +   +E G I+P
Sbjct: 447 REGQVIEAERTLREMLEAG-IKP 468


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 278/565 (49%), Gaps = 26/565 (4%)

Query: 104 RSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
           R+L P+ + AV++ Q D   AL+ F  A  +  ++H    Y  +++ L      +  +++
Sbjct: 3   RTLLPKHVAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKL 62

Query: 164 LRLMARRGIECRPE-AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           L  M         E A+   M  Y R GK++ A+     M      P++   N  +++LV
Sbjct: 63  LSEMRENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILV 122

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
                 +A +   RM+  G+  +V TY   IK +C   R   A++L+  MP  GC  + V
Sbjct: 123 EFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAV 182

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFH---DQGRIEEAKELVNQM 330
           +Y TV+  L         R+L ++M         V  + L H    +G + E++ L+ ++
Sbjct: 183 AYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKV 242

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELD---------QAKKMLQQMYHHGCKPNTVSYTAFL 381
            + G  P++ T+   V G CR G LD         +A++ L++M + G +P+ ++Y + +
Sbjct: 243 LKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSII 302

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G C  G   +A  ++  +  + + P+  TY  +++G  ++G    A  V ++ + KG  
Sbjct: 303 DGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLR 362

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P+ V  N LI+ L ++G +  A + M E    GC  N+  +  +I G C+ G + +A  L
Sbjct: 363 PSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHL 422

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           +DD       PD  TY T+ID   K  +++ ATE++ +M S+G+ P V+TY T+++  C+
Sbjct: 423 VDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCK 482

Query: 562 VGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
            G+ E+++++  K + ++ C      YN ++++LC    + EA  +LG++     K D  
Sbjct: 483 AGKSEEVMEIF-KAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVV 541

Query: 619 TCHVLVESYLNKGIPLLAYKVACRM 643
           +   L   +   G    AY++  RM
Sbjct: 542 SFGTLFTGFCKIGDIDGAYQLFRRM 566



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/572 (24%), Positives = 264/572 (46%), Gaps = 36/572 (6%)

Query: 129 YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR 188
           Y   R    + D   Y + ++   KT     A R+LR M   G +    A+  ++     
Sbjct: 134 YMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYD 193

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           +G+  +A  +   M    + P+++  N  +HVL     + ++ R L ++   G+ PN+ T
Sbjct: 194 SGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFT 253

Query: 249 YNCLIKGYCDL---------HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
           +N  ++G C            R+ +A + + +M   G  PD ++Y +++   CK      
Sbjct: 254 FNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCK------ 307

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                            +G +++A  ++      G  PD  TY +++NGFC+ G+ D+A 
Sbjct: 308 -----------------KGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAM 350

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            + +     G +P+ V Y   + GL   G  L A +++N   E    PN  TY++V++GL
Sbjct: 351 AVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGL 410

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            + G +S+A  +V + + KG  P     N LI   C++ K+D A + +    ++G   +V
Sbjct: 411 CKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDV 470

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           + + +L+ G C+ G  EE + +   M      P+ +TY  I+D+L K  +V EA +L+ +
Sbjct: 471 ITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGE 530

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK-CRTA--YNQVIENLCSFG 596
           M SKGL P VV++ T+   +C++G ++   +L  +M  +   C T   YN ++       
Sbjct: 531 MKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQL 590

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            +  A K+   +  +    D  T  V+++ +   G     YK       +  IP L    
Sbjct: 591 NMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFG 650

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           +V   L ++ K  EA  ++   +++G I P++
Sbjct: 651 RVLNCLCVKDKVHEAVGIIHLMLQKG-IVPET 681



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 224/470 (47%), Gaps = 57/470 (12%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR----- 232
           AF+ L+    + G +  +  +L  + K  V PNL   N  +  L     L +A+R     
Sbjct: 218 AFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVV 277

Query: 233 ----FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
               +L +M   G  P+ LTYN +I GYC    ++DA +++ +   KG  PD+ +Y +++
Sbjct: 278 EAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLI 337

Query: 289 GYLCKE----KRIKEVRDLMEKMVNDSNLFHD--------QGRIEEAKELVNQMSQMGCI 336
              CK+    + +   +D + K +  S + ++        QG I  A +L+N+M++ GC+
Sbjct: 338 NGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCL 397

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P++ TY  V+NG C++G +  A  ++      GC P+  +Y   ++G C   K   A EM
Sbjct: 398 PNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEM 457

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +N    +  TP+ ITY+ +++GL + GK  E  ++ + M +KG  P  +  N+++ SLC+
Sbjct: 458 VNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCK 517

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY----LCKK-- 510
             K++ A   + E  +KG   +VV+F +L  GFC+ GD++ A  L   M     +C    
Sbjct: 518 AKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTA 577

Query: 511 ------------------------------DPDTVTYTTIIDALSKNGRVEEATELMMKM 540
                                         DPD  TY  +ID   K G + +  + +++ 
Sbjct: 578 TYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLEN 637

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIE 590
           + K  +P++ T+  V++  C   +V + + ++  ML K       N + E
Sbjct: 638 MEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVNTIFE 687



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 180/413 (43%), Gaps = 48/413 (11%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G+++EA +   +M    C P V ++ A++N     G  +QA K+  +M   G + +  +
Sbjct: 89  KGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYT 148

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YT  +   C   +   A  ++    E     NA+ Y  V+ GL   G+   A ++  EM+
Sbjct: 149 YTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEML 208

Query: 437 KKGFFPTPVEINLLIQS-----------------------------------LCREGKMD 461
            +   P  V  N L+                                     LCREG +D
Sbjct: 209 ARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALD 268

Query: 462 ---------GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
                     A++++++ +N G   + + + S+I G+C+KG +++A  +L D       P
Sbjct: 269 RAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKP 328

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D  TY ++I+   K+G  + A  +    L KGL P++V Y T+I    Q G +   L+L+
Sbjct: 329 DEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLM 388

Query: 573 EKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
            +M ++  C      YN VI  LC  G + +A  ++   +      D  T + L++ Y  
Sbjct: 389 NEM-AENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCK 447

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +     A ++  RM+++ + PD+     +   L   GKSEE   +     E+G
Sbjct: 448 QLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKG 500



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 181/384 (47%), Gaps = 22/384 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNA 195
           R   ++Y  +++ LS+  L   A +++  MA  G  C P  ++Y +V     + G + +A
Sbjct: 362 RPSIVLYNTLIKGLSQQGLILPALQLMNEMAENG--CLPNIWTYNLVINGLCKMGCVSDA 419

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
            +++         P++   NT I       KL  A   + RM   G+TP+V+TYN L+ G
Sbjct: 420 SHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNG 479

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-------- 307
            C   + ++ +++   M  KGC+P+ ++Y  ++  LCK K++ E  DL+ +M        
Sbjct: 480 LCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539

Query: 308 -VNDSNLFHD---QGRIEEAKELVNQM-SQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
            V+   LF      G I+ A +L  +M  Q        TY  +V+ F     ++ A K+ 
Sbjct: 540 VVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLF 599

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
             M + GC P+  +Y   ++G C  G   +  + +  + E+ + P+  T+  V++ L  +
Sbjct: 600 SVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVK 659

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            K+ EA  ++  M++KG  P  V  N + ++   + K+  A K + E L K   +    +
Sbjct: 660 DKVHEAVGIIHLMLQKGIVPETV--NTIFEA---DKKVVAAPKILVEDLLKKGHIAYYTY 714

Query: 483 TSLIRGFCQKGDLEEALSLLDDMY 506
             L  G   K  L++ L  ++ ++
Sbjct: 715 ELLYDGIRDKKILKKRLPTVNSLH 738



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 131/297 (44%), Gaps = 16/297 (5%)

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI---TYSVVMHGLRREGKL 425
           G K    +Y   +  L H+G+  E  +++  SE      NA+    Y   M    R+GK+
Sbjct: 35  GFKHTASTYKCIVQKLGHHGEFEEMEKLL--SEMRENVNNALLEGAYIEAMKNYGRKGKV 92

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA D    M      P+    N ++  L   G  + A K      ++G   +V  +T  
Sbjct: 93  QEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIR 152

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I+ FC+      AL LL +M     D + V Y T++  L  +G  + A EL  +ML++ L
Sbjct: 153 IKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCL 212

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLE---- 599
            P VV +  ++H  C+ G V +  +LL K+L +  C     +N  ++ LC  G L+    
Sbjct: 213 CPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVR 272

Query: 600 -----EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
                EA + L K++    + D  T + +++ Y  KG+   A +V      +   PD
Sbjct: 273 NSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPD 329


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 264/556 (47%), Gaps = 24/556 (4%)

Query: 155 KLCQGAK--RVLRLMAR--RGIECRPEAFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVA 208
            LC G++    L ++ R  +G  C P+  SY MV +     G++  A  + + M +  V 
Sbjct: 245 SLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVV 304

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           PN++  N+ +H L     + KA   L +M    I P+ +TY  +I GY  L R K+A K+
Sbjct: 305 PNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKM 364

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK---------MVNDSNLFHD--- 316
             EM  +G  PD V++ ++M  LCK KR KE  ++            +++ S L H    
Sbjct: 365 FKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYAT 424

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +GR  +   L + M+  G + D   +  ++N   + G +D+A  +  +M   G  PN V+
Sbjct: 425 EGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVT 484

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   +  LC  G+  +A E ++        PN + Y  ++ G    G L +A ++V EM+
Sbjct: 485 YATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMM 544

Query: 437 KKGFFPTP--VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
            +G  P P     + +I SLC EG++  A+      ++ G   ++  F SLI G+C  G 
Sbjct: 545 DQG-IPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGK 603

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           +++A  +LD M     +PD VTY+T+I+   K+GR+++   L  +ML K + PT VTY  
Sbjct: 604 MDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSL 663

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           V+    + GR     K+  +M+        + Y  +++ LC     +EA  +  K+    
Sbjct: 664 VLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMN 723

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
            K + +  + ++ +         A+ +   +    L+P+      +   L+ EG  EEAD
Sbjct: 724 LKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEAD 783

Query: 673 TLMLRFVERGHIQPKS 688
            +M   +E+    P S
Sbjct: 784 -IMFSSMEKTGCAPSS 798



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 215/437 (49%), Gaps = 17/437 (3%)

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK-LIDEMPLKGCSPDKVSYYTVMGYL 291
           F  R+  AG+  + +  N  +K  C   R  +A+  L+  M   GC PD  SY TV+  L
Sbjct: 187 FFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSL 246

Query: 292 CKEKRIKEVRDLMEKM----------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPD 338
           C   R +E  D++ +M          V+ + + H    +G I +A  L N+M Q G +P+
Sbjct: 247 CGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPN 306

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           VVTY ++V+  C+   +D+A+ +L+QM+ +  +P+ V+YTA ++G    G+  EA +M  
Sbjct: 307 VVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFK 366

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
               E   P+ +T++ +M  L +  +  EA ++   +  KG  P  +  ++L+     EG
Sbjct: 367 EMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEG 426

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           +            + G   +   F  LI    ++G ++EAL +  +M      P+ VTY 
Sbjct: 427 RFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYA 486

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           T+I AL + GR+ +A E + +M+S GL P  V Y ++I  +C  G +    +L+ +M+ +
Sbjct: 487 TVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQ 546

Query: 579 QKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
              R   T ++ +I +LC+ G +  A  +   V+    + D  T + L++ Y   G    
Sbjct: 547 GIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDK 606

Query: 636 AYKVACRMFNRNLIPDL 652
           A+ V   M +    PD+
Sbjct: 607 AFGVLDAMVSAGTEPDV 623



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 128/541 (23%), Positives = 249/541 (46%), Gaps = 52/541 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K +    A+ VLR M    I+     ++ ++  YS  G+ + A  +   
Sbjct: 308 VTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKE 367

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  + P+++  N+ +  L    +  +A      +   G  P++++Y+ L+ GY    R
Sbjct: 368 MTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGR 427

Query: 262 IKD-----------------------------------AIKLIDEMPLKGCSPDKVSYYT 286
             D                                   A+ +  EM  +G SP+ V+Y T
Sbjct: 428 FVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYAT 487

Query: 287 VMGYLCKEKRIKEVRDLMEKMVN-----DSNLFHD-------QGRIEEAKELVNQMSQMG 334
           V+  LC+  R+ +  + + +M++     ++ ++H         G + +AKELV++M   G
Sbjct: 488 VIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQG 547

Query: 335 CI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
              P++  ++++++  C  G +  A+ +   + H G +P+  ++ + ++G C  GK  +A
Sbjct: 548 IPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKA 607

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
             +++        P+ +TYS +++G  + G++ +   + REM+ K   PT V  +L++  
Sbjct: 608 FGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDG 667

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           L R G+   AKK   E +  G A+++  +T +++G C+    +EA++L   +       +
Sbjct: 668 LFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFE 727

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
                T+I AL K  R EEA +L   + + GLVP   TY  +I    + G VE+   +  
Sbjct: 728 IAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFS 787

Query: 574 KMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
            M  K  C  +    N +I  L   G + +AG  + KV  T    +AST  +L+  + +K
Sbjct: 788 SM-EKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASK 846

Query: 631 G 631
           G
Sbjct: 847 G 847



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/429 (23%), Positives = 185/429 (43%), Gaps = 80/429 (18%)

Query: 323 AKELVNQMSQMGCIPDVV-----TYTAVVNGFCRVGELD--------------------- 356
           A  L N++ +    P VV     TY  +++  CR    D                     
Sbjct: 144 AVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVT 203

Query: 357 --------QAKK-------MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM-INTS 400
                    AK+       +L +M   GC P+  SY   +  LC   +S EA +M +  +
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           + +  +P+ ++Y++V+HGL  EG++S+AC++  EMV+KG  P  V  N ++ +LC+   M
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D A+  +++  +     + V +T++I G+   G  +EA  +  +M      PD VT+ ++
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----- 575
           +D+L K+ R +EA E+   + +KG  P +++Y  ++H Y   GR  D+  L   M     
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 576 LSKQKC--------------------------------RTAYNQVIENLCSFGYLEEAGK 603
           ++   C                                   Y  VI  LC  G L +A +
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAME 503

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI-PDLKLCKKVSERL 662
            L +++    K +    H L++ +   G  + A ++   M ++ +  P++     +   L
Sbjct: 504 KLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSL 563

Query: 663 ILEGKSEEA 671
             EG+   A
Sbjct: 564 CNEGRVMNA 572



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 163/378 (43%), Gaps = 13/378 (3%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS- 200
           + Y  ++  L +      A   L  M   G++     +  L+  +   G L  A  ++S 
Sbjct: 483 VTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSE 542

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           MM +    PN+   ++ IH L    ++  A      +   G  P++ T+N LI GYC + 
Sbjct: 543 MMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVG 602

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE----VRDLMEKMVNDSNLFHD 316
           ++  A  ++D M   G  PD V+Y T++    K  RI +     R+++ K V  + + + 
Sbjct: 603 KMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYS 662

Query: 317 --------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                    GR   AK++ ++M + G    + TYT ++ G CR    D+A  +  ++   
Sbjct: 663 LVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAM 722

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
             K         ++ L    +  EA ++  +       PNA TY V++  L +EG + EA
Sbjct: 723 NLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEA 782

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             +   M K G  P+   +N +I+ L ++G++  A  +M +      ++     + LI  
Sbjct: 783 DIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISL 842

Query: 489 FCQKGDLEEALSLLDDMY 506
           F  KG   E +  L   Y
Sbjct: 843 FASKGRYREQIKFLPAKY 860



 Score = 40.0 bits (92), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 28/146 (19%), Positives = 56/146 (38%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R +   + Y ++L+ L +      AK++   M   G       ++ ++    R      A
Sbjct: 653 RVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEA 712

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + +   +    +   + I NT IH L    +  +A      +  +G+ PN  TY  +I  
Sbjct: 713 ITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIIN 772

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDK 281
                 +++A  +   M   GC+P  
Sbjct: 773 LLKEGSVEEADIMFSSMEKTGCAPSS 798


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 229/469 (48%), Gaps = 25/469 (5%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           RAG +  AM ++  M    + P L+  N+ +  L+   +  KA      M   G+ P+V 
Sbjct: 206 RAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVR 265

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           ++N LI G+C    +++A++   EM  +  +PD VS+  ++G                  
Sbjct: 266 SFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIG------------------ 307

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                LF  +G ++ A E + +M + G +PD V YT V+ GFCR G + +A ++  +M  
Sbjct: 308 -----LFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVA 362

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+ V+Y   LNGLC   +  +A E++N  +E    P+  T++ ++HG  R+G + +
Sbjct: 363 FGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEK 422

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A      +  +   P  V  N LI  +CR+G +  A +   +  ++    N V ++ LI 
Sbjct: 423 ALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILID 482

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
             C+KG ++ A + LD+M      P+ +TY +II    ++G V +  + + KM    ++P
Sbjct: 483 SHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMP 542

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            ++TY T+IH Y + G++ +   LL+ M ++  Q     YN +I      G ++EA  + 
Sbjct: 543 DLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVY 602

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            K+     + D  T   ++  ++  G    ++++   M  + L PD K 
Sbjct: 603 KKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDDKF 651



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 258/550 (46%), Gaps = 30/550 (5%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG--KLRNAMYV 198
           P V+ +++   ++++  + A    RL+    +     A + L+ A SRAG   L    Y 
Sbjct: 89  PQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADAYR 148

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L +   + V  N    N  +H      +  +    +  M+   + P+V+T+N ++     
Sbjct: 149 LVLSSNSEV--NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFR 206

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
              ++ A+ LID M  KG  P  V+Y +V+  L +                        G
Sbjct: 207 AGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLR-----------------------NG 243

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           R ++A+E+   M   G  PDV ++  ++ GFCR GEL++A +  ++M      P+ VS++
Sbjct: 244 RWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFS 303

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             +      G+   A E +    E    P+ + Y++V+ G  R G + EA  V  EMV  
Sbjct: 304 CLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAF 363

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  V  N L+  LC+E ++  A++ + E   +G   ++  FT+LI G+C+ G++E+A
Sbjct: 364 GCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKA 423

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L   D +   +  PD VTY T+ID + + G + +A EL   M S+ + P  VTY  +I  
Sbjct: 424 LQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDS 483

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           +C+ G+V++    L++M++K        YN +I+  C  G + +  + L K+       D
Sbjct: 484 HCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPD 543

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
             T + L+  Y+ +G    A+ +   M N N+ PD      +     + G  +EAD +  
Sbjct: 544 LITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYK 603

Query: 677 RFVERGHIQP 686
           +   RG I+P
Sbjct: 604 KMGARG-IEP 612



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 222/437 (50%), Gaps = 23/437 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +L+ L +      A+ V R M   G+     +F+ L+  + RAG+L  A+     
Sbjct: 230 VTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKE 289

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+   V P+++  +  I +     ++  A  +L  M+  G+ P+ + Y  +I G+C    
Sbjct: 290 MRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGL 349

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A+++ DEM   GC PD V+Y T++  LCKE+R+ +                      
Sbjct: 350 MLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSD---------------------- 387

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A+EL+N+M + G  PD+ T+T +++G+CR G +++A +    +     +P+ V+Y   +
Sbjct: 388 -AEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLI 446

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G+C  G   +A E+ +        PN +TYS+++     +G++  A   + EMV KG  
Sbjct: 447 DGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIV 506

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  +  N +I+  CR G +   ++F+ +  +     +++ + +LI G+ ++G + EA +L
Sbjct: 507 PNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNL 566

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L  M      PD VTY  II   S +G ++EA  +  KM ++G+ P   TY ++I+ +  
Sbjct: 567 LKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVV 626

Query: 562 VGRVEDLLKLLEKMLSK 578
            G  +   +L ++ML K
Sbjct: 627 AGNSKKSFQLHDEMLQK 643



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 177/388 (45%), Gaps = 27/388 (6%)

Query: 128 FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--A 185
           FY   R  R   D + +  ++ + ++      A   LR M   G+   P+   Y MV   
Sbjct: 286 FYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGL--MPDGVIYTMVIGG 343

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
           + RAG +  A+ V   M      P+++  NT ++ L    +L+ A   L  M+  G+ P+
Sbjct: 344 FCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPD 403

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           + T+  LI GYC    I+ A++  D +  +   PD V+Y T++  +C+            
Sbjct: 404 LCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCR------------ 451

Query: 306 KMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                      QG + +A EL + M      P+ VTY+ +++  C  G++D A   L +M
Sbjct: 452 -----------QGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM 500

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
            + G  PN ++Y + + G C +G   + ++ +     +   P+ ITY+ ++HG  +EGK+
Sbjct: 501 VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKM 560

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA ++++ M  +   P  V  N++I      G M  A    ++   +G   +   + S+
Sbjct: 561 HEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSM 620

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           I G    G+ +++  L D+M      PD
Sbjct: 621 INGHVVAGNSKKSFQLHDEMLQKGLAPD 648


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 243/475 (51%), Gaps = 33/475 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R++  M+       P   + L+     +G+   A  VL     AA  P+++  N  + 
Sbjct: 78  ALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVL-----AACEPDVMAYNAMVA 132

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
              V  +L  A R +  M +    P+  TYN LI+G C   R  +A+ ++D+M  +GC P
Sbjct: 133 GYCVTGQLDAARRLVADMPM---EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVP 189

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D V+Y  ++   CK    K+                       A +L+++M   GC PD+
Sbjct: 190 DVVTYTILLEATCKRSGYKQ-----------------------AMKLLDEMRAKGCAPDI 226

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           +TY  VVNG C+ G +D A + L+ +  HGC+PNTVSY   L GLC   +  +A +++  
Sbjct: 227 ITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAE 286

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             ++ + PN +T+++++  L R G +  A +V+ ++ K G  P  +  N ++ + C++ K
Sbjct: 287 MSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKK 346

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           MD A  F++  +++GC  ++V++ +L+   C+ G+++ A+ LL  +      P  ++Y T
Sbjct: 347 MDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 406

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LS 577
           +ID L+K G+ +EA EL+ +M++KGL P ++TY T+    C+  R+E+ ++   K+  + 
Sbjct: 407 VIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMG 466

Query: 578 KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
            +     YN ++  LC       A  +   ++      + ST  +L+E    +G+
Sbjct: 467 IRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGL 521



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 176/368 (47%), Gaps = 27/368 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + Y ++LE   K    + A ++L  M  +G  C P+  +Y +V     + G++ +A+ 
Sbjct: 190 DVVTYTILLEATCKRSGYKQAMKLLDEMRAKG--CAPDIITYNVVVNGICQEGRVDDAIE 247

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            L  +      PN +  N  +  L    +   A + +  M   G  PNV+T+N LI   C
Sbjct: 248 FLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLC 307

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               ++ A++++D++P  GC+P+ +SY  ++   CK+K++      +E MV+        
Sbjct: 308 RRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSR------- 360

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
                           GC PD+V+Y  ++   CR GE+D A ++L Q+   GC P  +SY
Sbjct: 361 ----------------GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISY 404

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              ++GL   GK+ EA E++N    +   P+ ITYS +  GL RE ++ EA     ++  
Sbjct: 405 NTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQD 464

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G  P  V  N ++  LC+  +   A       ++ GC  N   +T LI G   +G ++E
Sbjct: 465 MGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKE 524

Query: 498 ALSLLDDM 505
           A  LL ++
Sbjct: 525 ARELLGEL 532



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 188/375 (50%), Gaps = 13/375 (3%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            GR  EA+ ++       C PDV+ Y A+V G+C  G+LD A++++  M     +P++ +
Sbjct: 107 SGRTAEARRVL-----AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPM---EPDSYT 158

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   + GLC  G++  A  +++        P+ +TY++++    +     +A  ++ EM 
Sbjct: 159 YNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            KG  P  +  N+++  +C+EG++D A +F++   + GC  N V++  +++G C     E
Sbjct: 219 AKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWE 278

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +A  L+ +M      P+ VT+  +I  L + G VE A E++ ++   G  P  ++Y  ++
Sbjct: 279 DAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPIL 338

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           H +C+  +++  +  +E M+S+  C     +YN ++  LC  G ++ A ++L ++     
Sbjct: 339 HAFCKQKKMDRAMAFVELMVSR-GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 397

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
                + + +++     G    A ++   M  + L PD+     +S  L  E + EEA  
Sbjct: 398 TPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIR 457

Query: 674 LMLRFVERGHIQPKS 688
              +  + G I+P +
Sbjct: 458 AFCKVQDMG-IRPNT 471



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 6/186 (3%)

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           +RG  ++GDLEEAL L++ M   +          +I  L  +GR  EA  ++        
Sbjct: 66  LRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVL-----AAC 120

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
            P V+ Y  ++  YC  G+++   +L+  M  +    T YN +I  LC  G    A  +L
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSYT-YNTLIRGLCGRGRTGNALVVL 179

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
             +LR     D  T  +L+E+   +     A K+   M  +   PD+     V   +  E
Sbjct: 180 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQE 239

Query: 666 GKSEEA 671
           G+ ++A
Sbjct: 240 GRVDDA 245


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 231/439 (52%), Gaps = 23/439 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +L+ L ++ +   A  V + M   G+     +F+ L+  + R G++  A+ +   
Sbjct: 166 VTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKE 225

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+   + P+L+  +  I +     K+  A+ +L  M+  G+ P+ + Y  +I G+C    
Sbjct: 226 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 285

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + DA+++ DEM   GC PD V+Y T++  LCKE+R+ +                      
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD---------------------- 323

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A+ L+N+M + G  PD+ T+T +++G+C  G+LD+A ++   M +   +P+ V+Y   +
Sbjct: 324 -AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 382

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G+C  G   +A ++ +        PN +TYS+++     +G++ +A   + EM+ KG  
Sbjct: 383 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 442

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  +  N +I+  CR G +   +KF+Q+ +    + +++ + +LI G+ ++  + +A  L
Sbjct: 443 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 502

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L+ M   K  PD VTY  +I+  S +G V+EA  +  KM +KG+ P   TY ++I+ +  
Sbjct: 503 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 562

Query: 562 VGRVEDLLKLLEKMLSKQK 580
            G  ++  +L ++ML + K
Sbjct: 563 AGNSKEAFQLHDEMLQRGK 581



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 259/548 (47%), Gaps = 26/548 (4%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           P V+ +++   ++++  + A    RL+    +     A + L+ A SRAG    A     
Sbjct: 25  PRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYR 84

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           ++  +    N    N  +H      +  K    +  M+   + P+V+T+N ++       
Sbjct: 85  LVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAG 144

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
             + A+ L+D M  KG  P  V+Y +V+  LC+                        G  
Sbjct: 145 DAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCR-----------------------SGMW 181

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           ++A E+  +M   G  PDV ++T ++ GFCRVGE+++A K+ ++M H G KP+ VS++  
Sbjct: 182 DKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL 241

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           +      GK   A   +         P+ + Y++V+ G  R G +S+A  V  EMV  G 
Sbjct: 242 IGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGC 301

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  V  N L+  LC+E ++  A+  + E   +G   ++  FT+LI G+C +G L++AL 
Sbjct: 302 LPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 361

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L D M   +  PD VTY T+ID + + G +++A +L   M S+ + P  VTY  +I  +C
Sbjct: 362 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 421

Query: 561 QVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           + G+VED    L++M++K        YN +I+  C  G + +  K L K++      D  
Sbjct: 422 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 481

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           T + L+  Y+ +     A+K+   M    + PD+     +     + G  +EA  +  + 
Sbjct: 482 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 541

Query: 679 VERGHIQP 686
             +G I+P
Sbjct: 542 CAKG-IEP 548



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 238/473 (50%), Gaps = 25/473 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + + +M++   +    + A  ++  M  +G++     ++ ++    R+G    A  V 
Sbjct: 129 DVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF 188

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    VAP++      I       ++ +AL+  + M+  GI P++++++CLI  +   
Sbjct: 189 KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR 248

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            ++  A+  + EM   G  PD V Y  V+G  C+                        G 
Sbjct: 249 GKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCR-----------------------AGL 285

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           + +A  + ++M   GC+PDVVTY  ++NG C+   L  A+ +L +M   G  P+  ++T 
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 345

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G C  GK  +A ++ +T   +   P+ +TY+ ++ G+ R+G L +A D+  +M  + 
Sbjct: 346 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 405

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
            FP  V  ++LI S C +G+++ A  F+ E +NKG   N++ + S+I+G+C+ G++ +  
Sbjct: 406 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 465

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
             L  M + K  PD +TY T+I    K  ++ +A +L+  M  + + P VVTY  +I+ +
Sbjct: 466 KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGF 525

Query: 560 CQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
              G V++   + EKM +K  +  R  Y  +I    + G  +EA ++  ++L+
Sbjct: 526 SVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQ 578



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 189/407 (46%), Gaps = 41/407 (10%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQI---CAV----LRSQADERVALQFFY 129
           L+   CR+ E+  A   K+  E+R+  R +KP  +   C +     R + D  +A   + 
Sbjct: 206 LIGGFCRVGEIEEAL--KIYKEMRH--RGIKPDLVSFSCLIGLFARRGKMDHAMA---YL 258

Query: 130 WADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYS 187
              R +    D ++Y M++    +  L   A RV   M   G  C P+  +Y  L+    
Sbjct: 259 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV--GCGCLPDVVTYNTLLNGLC 316

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           +  +L +A  +L+ M++  V P+L    T IH   +  KL KAL+  + M    + P+++
Sbjct: 317 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 376

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN LI G C    +  A  L D+M  +   P+ V+Y  ++   C               
Sbjct: 377 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC--------------- 421

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                   ++G++E+A   +++M   G +P+++TY +++ G+CR G + + +K LQ+M  
Sbjct: 422 --------EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV 473

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +   P+ ++Y   ++G     K  +A +++N  E+E   P+ +TY+++++G    G + E
Sbjct: 474 NKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 533

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           A  +  +M  KG  P       +I      G    A +   E L +G
Sbjct: 534 AGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 24/273 (8%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           ALQ F     Q R R D + Y  +++ + +      A  +   M  R I      +S L+
Sbjct: 359 ALQLFDTMLNQ-RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILI 417

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
            ++   G++ +A   L  M    + PN++  N+ I        ++K  +FL++M +  ++
Sbjct: 418 DSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVS 477

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+++TYN LI GY    ++ DA KL++ M  +   PD V+Y  ++               
Sbjct: 478 PDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLI--------------- 522

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   N F   G ++EA  +  +M   G  PD  TY +++NG    G   +A ++  
Sbjct: 523 --------NGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHD 574

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           +M   G +    + T     + ++ +SL+   M
Sbjct: 575 EMLQRGKEKRRAAGTVQFVNIQNSAESLKQMPM 607


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 145/564 (25%), Positives = 262/564 (46%), Gaps = 18/564 (3%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGI-ECRPEAFSYLMV--AYSRAGKLRNAMYV 198
           + Y  +L+        + A  +L +MA   +  C P   SY  V   +   G++  A  +
Sbjct: 167 VSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNL 226

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
              M    + PN++     I  L     + +A    ++M   G+ PN++TY CLI GY  
Sbjct: 227 FLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLS 286

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
           + + K+ ++++ EM   G  PD  +Y  ++ YLCK+ +  E R L + M+          
Sbjct: 287 IGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSI 346

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                + +  +G + E    ++ M   G  P+   +  V   F +   + +A  +  +M 
Sbjct: 347 YGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMR 406

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  PN V+Y   ++ LC  G+  +A    N    E   PN + ++ +++GL    K  
Sbjct: 407 QQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWE 466

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A ++  EMV +G  P  V  N ++ +LC EG++  A++ +      G   +++++ +LI
Sbjct: 467 KAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALI 526

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           RG C  G  +EA  LLD M      P+  TY T++    ++GR+++A  +  +MLS G+ 
Sbjct: 527 RGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGIT 586

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS--KQKCRTAYNQVIENLCSFGYLEEAGKI 604
           P VVTY T++H   +  R  +  +L   M++  KQ     YN ++  L     ++EA K+
Sbjct: 587 PVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKM 646

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
              +     + D  T ++++ + L  G    A  +   +    L+PD+   + ++E LI 
Sbjct: 647 FQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIE 706

Query: 665 EGKSEEADTLMLRFVERGHIQPKS 688
           EG  EE D  M   +E+    P S
Sbjct: 707 EGSLEEFDG-MFSEMEKSGCAPNS 729



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 259/536 (48%), Gaps = 37/536 (6%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAA-VAPNLLICNTAIHVLVVGNKLAKALR 232
           P+ F+Y  L+  + R G+L +      ++ K      ++++ N  +  L    ++ +A+ 
Sbjct: 92  PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMG 151

Query: 233 -FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP---LKGCSPDKVSYYTVM 288
             L RM   G TPNV++YN L+KG+CD +R ++A++L+  M    ++ C P+ VSY TV+
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVI 211

Query: 289 GYLCKEKRIKEVRDLMEKMVNDSNLFHDQG-------------------RIEEAKELVNQ 329
                E ++ +  +L   M        DQG                    ++ A+ +  Q
Sbjct: 212 NGFFTEGQVDKAYNLFLDMT-------DQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQ 264

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M   G  P++VTYT +++G+  +G+  +  +ML++M  HG +P+  +Y   L+ LC  GK
Sbjct: 265 MIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGK 324

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             EAR++ ++   +   P+   Y +++HG   +G LSE    +  MV  G  P     N+
Sbjct: 325 CTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNI 384

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           +  +  ++  +  A     +   +G + NVVN+ +LI   C+ G +++A    + M    
Sbjct: 385 VFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEG 444

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV---E 566
             P+ V +T+++  L    + E+A EL  +M+++G+ P VV + T++   C  GRV   +
Sbjct: 445 VAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQ 504

Query: 567 DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            L+ L+E++ ++     +YN +I   C  G  +EA K+L  +L    K +  T + L+  
Sbjct: 505 RLIDLMERVGTRPDI-ISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHG 563

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           Y   G    AY V   M +  + P +     +   L    +  EA  L L  +  G
Sbjct: 564 YCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSG 619



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 220/461 (47%), Gaps = 16/461 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++L+ L K   C  A+++   M R+GI+     +  ++  Y+  G L      L
Sbjct: 308 DCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFL 367

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M    ++PN  I N           + +A+    +M+  G++PNV+ Y  LI   C L
Sbjct: 368 DLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKL 427

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND----SNLFH 315
            R+ DA    ++M  +G +P+ V + +++  LC   + ++  +L  +MVN     + +F 
Sbjct: 428 GRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFF 487

Query: 316 D--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +        +GR+ +A+ L++ M ++G  PD+++Y A++ G C VG+ D+A K+L  M  
Sbjct: 488 NTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLS 547

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G KPN  +Y   L+G C +G+  +A  +         TP  +TY+ ++HGL +  + SE
Sbjct: 548 VGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSE 607

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A ++   M+  G   +    N+++  L +   +D A K  Q   +K   V+++ F  +I 
Sbjct: 608 AKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIG 667

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
              + G  E+A++L   +      PD  TY  I + L + G +EE   +  +M   G  P
Sbjct: 668 ALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAP 727

Query: 548 TVVTYRTVIHRYCQVGRVED----LLKLLEKMLSKQKCRTA 584
             +    ++ R    G +      L K+ EK  S +   T+
Sbjct: 728 NSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTS 768



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 166/373 (44%), Gaps = 14/373 (3%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           RQ     + + Y  +++ L K      A+     M   G+      F+ L+       K 
Sbjct: 406 RQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKW 465

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A  +   M    + PN++  NT +  L    ++ KA R ++ M+  G  P++++YN L
Sbjct: 466 EKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNAL 525

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS- 311
           I+G+C + +  +A KL+D M   G  P++ +Y T++   C++ RI +   + ++M+++  
Sbjct: 526 IRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGI 585

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                        LF  + R  EAKEL   M   G    + TY  ++NG  +   +D+A 
Sbjct: 586 TPVVVTYNTILHGLFKTR-RFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEAL 644

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           KM Q +     + + +++   +  L  +G+  +A  +  T       P+  TY ++   L
Sbjct: 645 KMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENL 704

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
             EG L E   +  EM K G  P  + +N L++ L   G +  A  ++ +   K  ++  
Sbjct: 705 IEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEA 764

Query: 480 VNFTSLIRGFCQK 492
              + LI  F ++
Sbjct: 765 STTSMLISLFSRE 777



 Score = 39.7 bits (91), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 52/261 (19%), Positives = 100/261 (38%), Gaps = 53/261 (20%)

Query: 445 VEINLLIQSLCREGKM--DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL------E 496
           +E+  +I +  R G +  D A K   E L+     +++ F  L+               E
Sbjct: 14  LELERIIGARARAGSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSE 73

Query: 497 EALSLLDDMY--LCKK-DPDTVTYTTIIDALSKNGRVE---------------------- 531
             +S  + M    C K  PD  TY+ ++    + GR+E                      
Sbjct: 74  LVVSCFNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVV 133

Query: 532 --------------EATELMMKMLSK-GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
                         EA  ++++ +S+ G  P VV+Y T++  +C   R E+ L+LL  M 
Sbjct: 134 NRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMA 193

Query: 577 SKQ--KCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
             Q   C     +YN VI    + G +++A  +   +       +  T  ++++      
Sbjct: 194 DGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQ 253

Query: 632 IPLLAYKVACRMFNRNLIPDL 652
           +   A  V  +M ++ + P++
Sbjct: 254 VVDRAEGVFQQMIDKGVRPNI 274


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 270/569 (47%), Gaps = 22/569 (3%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA--YSRAGKLRN 194
           +  D + Y  ++  L KT     A  ++  M  +G+   P+  +Y ++     RAGK+  
Sbjct: 6   FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGV--NPDVATYTIIVDRLCRAGKVDE 63

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +   M +   + N +  N  I+ L     + +A + LE M   G  P+ +TYN ++ 
Sbjct: 64  ADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILS 123

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------- 307
           G C + ++ +A +  D MP +G SPD V+Y  ++  L KE ++ E   L + M       
Sbjct: 124 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKV 183

Query: 308 ----VNDSNLFHDQGRIE---EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
               +  + L     R+E   EA +L   +   G +PD VTY +++ G  R   +D+A++
Sbjct: 184 APDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE 243

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           M ++M   GC PN  +Y+  L+G C  G      E+     E+ ++P+ +  + V+  L 
Sbjct: 244 MFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLC 303

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +  K+ +A  V+ EM K G  P  V  N+L+  LC+   +D A +     ++ GCA ++V
Sbjct: 304 KAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIV 363

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
           +++ ++ G C+   + +A  L D M   K  PD VT+  ++D L K G+++EA +L+  M
Sbjct: 364 SYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVM 423

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYL 598
               ++P  VT  T++H  C+  R ++ ++L + M+ K        +N V+  LC  G L
Sbjct: 424 SEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKL 483

Query: 599 EEAGKILGKVLRTASK--ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            +A      ++++  +   D  T   LV + +  G    A     +M      PD     
Sbjct: 484 AQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYN 543

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQ 685
            +   L  +G+  +AD L     E+G + 
Sbjct: 544 TLMNGLRKQGRHIQADRLTQAMKEKGFLS 572



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 193/396 (48%), Gaps = 49/396 (12%)

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M++ G  PDVVTY+ +++G C+ G++ +A +M+++M   G  P+  +YT  ++ LC  GK
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             EA E+ +   E   + N + Y+ +++GL ++  +  A  ++ EM  KG+ P  +  N 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 450 LIQSLCREGKMDGAKKFMQECLNKG----------------------------------- 474
           ++  LCR GK+  AK+F     ++G                                   
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 475 --CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
              A +++ + +LI GFC+    +EA+ L  D+      PDTVTY +I+  L++   ++E
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIE 590
           A E+  KM+  G  P   TY  V+  +C+VG +   L+L E+M  K+        N VI+
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC    +++A K+L ++ +  +  D  T ++L++      +   A+++   M +    P
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360

Query: 651 DLKLCKKVSERLILEG-----KSEEADTLMLRFVER 681
           D+     VS  ++L G     K  +A  L  R +ER
Sbjct: 361 DI-----VSYSVVLNGLCKTNKVHDARVLFDRMIER 391



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 137/288 (47%), Gaps = 18/288 (6%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           + R+  D ++   ++++L K K    A +VL  M++ G       ++ L+    +   + 
Sbjct: 285 EKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 344

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  + S M     AP+++  +  ++ L   NK+  A    +RM    + P+V+T+N L+
Sbjct: 345 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 404

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN- 312
            G C   ++ +A  L+D M      PD V+  T+M  LC++KR  E   L + MV     
Sbjct: 405 DGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTV 464

Query: 313 ---LFHD--------QGRIEEA----KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
              L H+        +G++ +A    K +V    +    PDVVTYT +VN     G +DQ
Sbjct: 465 ADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFS--PDVVTYTTLVNALIEAGRVDQ 522

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           A    QQM   GC P+ V+Y   +NGL   G+ ++A  +    +E+ +
Sbjct: 523 AVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 570


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 254/545 (46%), Gaps = 60/545 (11%)

Query: 175 RPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
            P  F  L+  Y +A KLR       +++   +  ++  CN+ +  LV    +  A    
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
           + +  +G+  NV T N +I   C   +I++    + +M  KG  PD V+Y T++   C+ 
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR- 144

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
                                 QG +EEA EL++ MS  G  P V TY A++NG C+ G+
Sbjct: 145 ----------------------QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 182

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
             +AK +L +M   G  P+T +Y   L   C N   ++A  + +    +   P+ +++S 
Sbjct: 183 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 242

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++  L + G L +A    R+M   G  P  V   +LI   CR G M  A K   E L +G
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           C ++VV + +++ G C++  L EA  L  +M      PD  T+TT+I+  SK+G + +A 
Sbjct: 303 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 362

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENL 592
            L   M+ + L P VVTY T+I  +C+   +E + +L   M+S++      +Y  +I   
Sbjct: 363 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 422

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESY----------------LNKGI---- 632
           C+ G + EA ++  +++    +A   TC+ +V+ Y                L KGI    
Sbjct: 423 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 482

Query: 633 ----PLL-----------AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLR 677
                L+           A+ +  +M N  L+PD+     +      +G+ +EA+ +ML+
Sbjct: 483 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLK 542

Query: 678 FVERG 682
            +ERG
Sbjct: 543 MIERG 547



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 250/563 (44%), Gaps = 34/563 (6%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPI-------VYYM--MLEILSK 153
            R LK + +C  + +       L    W D  W    + +       VY +  M+  L K
Sbjct: 50  FRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK 109

Query: 154 TKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI 213
            +  +  K  L  M  +G+      ++ L+ AY R G L  A  ++  M    + P +  
Sbjct: 110 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFT 169

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
            N  I+ L    K  +A   L+ M   G++P+  TYN L+   C    + DA ++ DEMP
Sbjct: 170 YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMP 229

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQM 333
            +G  PD VS+  ++G L K                        G +++A +    M   
Sbjct: 230 SQGVVPDLVSFSALIGLLSK-----------------------NGCLDQALKYFRDMKNA 266

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  PD V YT ++ GFCR G + +A K+  +M   GC  + V+Y   LNGLC      EA
Sbjct: 267 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 326

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            E+     E    P+  T++ +++G  ++G +++A  +   M+++   P  V  N LI  
Sbjct: 327 DELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 386

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C+  +M+   +   + +++    N +++  LI G+C  G + EA  L D+M     +  
Sbjct: 387 FCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 446

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            +T  TI+    + G   +A E +  ML KG+VP  +TY T+I+ + +   ++    L+ 
Sbjct: 447 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 506

Query: 574 KMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           KM +         YN ++      G ++EA  I+ K++      D ST   L+  ++ + 
Sbjct: 507 KMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQN 566

Query: 632 IPLLAYKVACRMFNRNLIPDLKL 654
               A++V   M  R  +PD K 
Sbjct: 567 NLKEAFRVHDEMLQRGFVPDDKF 589


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 153/568 (26%), Positives = 268/568 (47%), Gaps = 20/568 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++      K  + AK +L  M   G++  P  ++ L+  + R G +  A  + 
Sbjct: 275 DLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIK 334

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    +  NL+I NT ++ +    K+ KAL  ++ M   G+ P+  TY+ LI+G+C  
Sbjct: 335 DEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRG 394

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
             +  A +L+DEM  +  +P  ++Y  ++  LC+   ++    ++ +MV +         
Sbjct: 395 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVY 454

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +GR+EE++ ++ +M + G +PDV  Y +++ GFC+   +++A+  L +M  
Sbjct: 455 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 514

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
              +PN  +Y AF++G    G+   A    N        PN   Y+ ++ G  +EG ++E
Sbjct: 515 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 574

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  V R ++ +         ++LI  L R GKM  A     E   KG   N   + SLI 
Sbjct: 575 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 634

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C++G++++A  LL++M +   +PD VTY  +ID L K G +E A  L   +  +GL P
Sbjct: 635 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 694

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKIL 605
             VTY  ++  YC+        +LLE+ML +     A  YN ++   C     E+A  + 
Sbjct: 695 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 754

Query: 606 GKVLRTASKADASTC--HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
            ++L    K  AST   + L+E Y   G    A  +   M  +  IP+      + +   
Sbjct: 755 QEMLE---KGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 811

Query: 664 LEGKSEEADTLMLRFVERGHIQPKSEEH 691
             G   EA  L L   ER ++ P ++ +
Sbjct: 812 KAGMMGEAKRLWLEMQER-NVMPTAKTY 838



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 165/659 (25%), Positives = 301/659 (45%), Gaps = 57/659 (8%)

Query: 78  VREVCRLIELRSAWSPKLEGELRNLLRSLKPRQI-CAVLRSQ-ADERVALQFFYWADRQW 135
           VRE+  L+   + W   +E    ++ + L    I   +L++Q  D +  L FFYW+  + 
Sbjct: 36  VREITTLLNSHN-WQALMESS--DIPKKLNTDIIRSVILQNQVGDPKRLLNFFYWSQHKM 92

Query: 136 ---RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR----------------RGIECRP 176
                + D  V   +   L  +     A  +++ + R                R     P
Sbjct: 93  GTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSP 152

Query: 177 EA--FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
            +  F  LM +Y + G L  A+ V    +     P+LL CN+ +  L+ GNK+    +  
Sbjct: 153 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVF 212

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDA----------IKLIDE-------MPLKGC 277
           + M    + P+V TY  +I  +C +  +KDA           +L+DE       M  KG 
Sbjct: 213 DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGL 272

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
            PD  +Y  ++   C EKR +E + ++ +M++              + F  QG IE+A  
Sbjct: 273 VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFR 332

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           + ++M   G   +++ +  ++NG C+ G++++A +++Q+M   G +P++ +Y+  + G C
Sbjct: 333 IKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHC 392

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
                  A E+++  ++    P  +TYSV+++GL R G L     ++REMV  G  P  V
Sbjct: 393 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV 452

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               L+ +  +EG+++ ++  ++    +G   +V  + SLI GFC+   +EEA + L +M
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 512

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
              +  P+  TY   ID  SK G +E A     +MLS G++P V  Y  +I  +C+ G V
Sbjct: 513 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 572

Query: 566 EDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
            +   +   +LS++  +    Y+ +I  L   G + EA  I  ++       +A T + L
Sbjct: 573 TEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 632

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +     +G    A ++   M  + + PD+     + + L   G+ E A  L      RG
Sbjct: 633 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 691



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/541 (26%), Positives = 261/541 (48%), Gaps = 35/541 (6%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVL------------------SMMQKAAVAPNLLICN 215
           P+ ++Y  ++ A+ + G +++A  VL                  SM+ K  V P+L   +
Sbjct: 222 PDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLV-PDLYTYD 280

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             I+   +  +  +A   L  M   G+ P  +TYN LI G+     I+ A ++ DEM   
Sbjct: 281 ILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC 340

Query: 276 GCSPDKVSYYTVMGYLCK----EKRIKEVRDLMEKMVN-DSNLF------HDQGR-IEEA 323
           G   + + + T++  +CK    EK ++ ++++MEK V  DS  +      H +G+ +  A
Sbjct: 341 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARA 400

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
            EL+++M +    P V+TY+ ++NG CR G L     +L++M  +G KPN V YT  +  
Sbjct: 401 FELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTA 460

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
               G+  E+R ++    E+   P+   Y+ ++ G  +  ++ EA   + EM+++   P 
Sbjct: 461 HAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 520

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
                  I    + G+M+ A ++  E L+ G   NV  +T+LI G C++G++ EA S+  
Sbjct: 521 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 580

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
            +   +   D  TY+ +I  LS+NG++ EA  +  ++  KGL+P   TY ++I   C+ G
Sbjct: 581 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 640

Query: 564 RVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
            V+   +LLE+M  K        YN +I+ LC  G +E A  +   +       +  T  
Sbjct: 641 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 700

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
            +V+ Y     P  A+++   M  R + PD  +   +      E K E+A  L    +E+
Sbjct: 701 AMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK 760

Query: 682 G 682
           G
Sbjct: 761 G 761



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/543 (25%), Positives = 255/543 (46%), Gaps = 56/543 (10%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y +++  L +    QG   +LR M   G++     ++ LM A+++ G++  +  +L  
Sbjct: 417 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 476

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M++  + P++   N+ I       ++ +A  +L  M    + PN  TY   I GY     
Sbjct: 477 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 536

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSN 312
           ++ A +  +EM   G  P+   Y  ++   CKE  + E          R +++ +   S 
Sbjct: 537 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 596

Query: 313 LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L H     G++ EA  + +++ + G +P+  TY ++++G C+ G +D+A ++L++M   G
Sbjct: 597 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 656

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG----------- 418
             P+ V+Y   ++GLC  G+   A+ + +  E    TPN +TY+ ++ G           
Sbjct: 657 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAF 716

Query: 419 -------LR-----------------REGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
                  LR                 +E K  +A D+ +EM++KGF  T V  N LI+  
Sbjct: 717 QLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAST-VSFNTLIEGY 775

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ GK+  A   ++E + K    N V +TSLI   C+ G + EA  L  +M      P  
Sbjct: 776 CKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 835

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            TYT+++      G + E + L  +M++KG+ P  +TY  +I  YC+ G V +  KL ++
Sbjct: 836 KTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDE 895

Query: 575 MLSKQKCRTAYNQVIENLCSF--------GYLEEAGKILGKVLRTASKADASTCHVLVES 626
           +L K     +  ++    CS         G ++EA ++L  +++    ++ ++   LV+ 
Sbjct: 896 ILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955

Query: 627 YLN 629
             N
Sbjct: 956 NQN 958



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 207/448 (46%), Gaps = 32/448 (7%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R R +   Y   ++  SK    + A R    M   G+      ++ L+  + + G +  A
Sbjct: 516 RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEA 575

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             V   +    V  ++   +  IH L    K+ +A      +Q  G+ PN  TYN LI G
Sbjct: 576 FSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISG 635

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
            C    +  A +L++EM +KG +PD V+Y  ++  LCK                      
Sbjct: 636 SCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCK---------------------- 673

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G IE AK L + +   G  P+ VTY A+V+G+C+      A ++L++M   G  P+  
Sbjct: 674 -AGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAF 732

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            Y   LN  C   K  +A ++     E+ +  + ++++ ++ G  + GKL EA  ++ EM
Sbjct: 733 IYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEM 791

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           ++K F P  V    LI   C+ G M  AK+   E   +        +TSL+ G+   G++
Sbjct: 792 IEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNM 851

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR-- 553
            E  +L ++M     +PD +TY  +IDA  + G V EA +L  ++L KG+ P    +R  
Sbjct: 852 SEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGM-PMKSGFRLG 910

Query: 554 ----TVIHRYCQV-GRVEDLLKLLEKML 576
               +VI R  Q+ G +++  ++L  M+
Sbjct: 911 LPTCSVIARGFQIAGNMDEAAEVLRSMV 938



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 198/416 (47%), Gaps = 19/416 (4%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
           +Y  ++E   K      A  V R +  R +    + +S L+   SR GK+  A  + S +
Sbjct: 558 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 617

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
           Q+  + PN    N+ I        + KA + LE M + GI P+++TYN LI G C    I
Sbjct: 618 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 677

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----NDSNLFH-- 315
           + A  L D++  +G +P+ V+Y  ++   CK K       L+E+M+      D+ +++  
Sbjct: 678 ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 737

Query: 316 -----DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                 + + E+A +L  +M + G     V++  ++ G+C+ G+L +A  +L++M     
Sbjct: 738 LNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQF 796

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PN V+YT+ ++  C  G   EA+ +    +E    P A TY+ ++HG    G +SE   
Sbjct: 797 IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSA 856

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA------VNVVNFTS 484
           +  EMV KG  P  +   ++I + CREG +  A K   E L KG        + +   + 
Sbjct: 857 LFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSV 916

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
           + RGF   G+++EA  +L  M       +T +   ++D        E++  L+ +M
Sbjct: 917 IARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 170/662 (25%), Positives = 288/662 (43%), Gaps = 45/662 (6%)

Query: 39  DGSDSDDHFMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGE 98
           DG D         S    RV+++  RR   E  +    + RE  R       W   L  +
Sbjct: 30  DGKDGVSEAEGSGSIGGERVSQDISRRNYTEMAKIVATITREKPR-------WEQTLVSD 82

Query: 99  LR--NLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKL 156
               N    L  R++ A   +Q +  ++L+FF W         DPI   M+ E L   K 
Sbjct: 83  FPSFNFADPLFFRELVA---TQNNVLLSLRFFQWLCTNHDCTPDPISSNMLFEALLDAKA 139

Query: 157 CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
            + AK V  +    G      +    +      G +  A+ V   +++A +  +++ CN+
Sbjct: 140 VRAAKMVRDIA---GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNS 196

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGIT--PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
            +   +   K      F + M  AG     N  T  CLI+ +CD  ++    +L+++   
Sbjct: 197 ILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLK 256

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
            G  P   +Y  ++   C+ K    + +++  M+  ++L                     
Sbjct: 257 TGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHL--------------------- 295

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P + TY  ++NG C+  E  +A ++   +   G  P+ V YT  ++GLC  G   EAR
Sbjct: 296 --PTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEAR 353

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           ++     ++   PNA TY+ ++HG  + G    AC++  EM  KG+  T V  N +I  L
Sbjct: 354 KLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISEL 413

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C  GK D A +  ++    G   + + + SLIRGFC++G ++E ++LL+++      P  
Sbjct: 414 CSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSV 473

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
             Y  +I    K+G  E A  L+  M SKGL P   TY T++H   + G  E + +L  +
Sbjct: 474 SLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNE 533

Query: 575 MLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
             +K    T    N++I  LCS G  +EA ++  K+  T  KADA T + L+  +  +G 
Sbjct: 534 TCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGK 593

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE--E 690
              +  +   +  + L P       +  +L   G +E A  L    V +G I+P +   E
Sbjct: 594 VGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKG-IEPHANLRE 652

Query: 691 HL 692
           HL
Sbjct: 653 HL 654



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 194/429 (45%), Gaps = 12/429 (2%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           +L    + G++     ++ L+  + +A    +   VL  M      P +      I+ L 
Sbjct: 250 LLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLC 309

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              +  +A R    ++  G  P+ + Y  +I G C++    +A KL  EM  KG  P+  
Sbjct: 310 KNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAY 369

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQM 330
           +Y T++    K    +   +L  +M N              +    +G+ +EA E+  +M
Sbjct: 370 TYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKM 429

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
           S+ G   D +TY +++ GFC+ G++D+   +L ++     +P+   Y   +   C +G  
Sbjct: 430 SETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDF 489

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             A+ ++     +   PNA TY  ++HG  + G      ++  E   KG+  T    N +
Sbjct: 490 EAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKI 549

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I  LC  GK D A +  ++    G   + + + SLIRGFC++G + ++++LL+++     
Sbjct: 550 ISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGL 609

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P   +Y ++I  L +NG  E A  L   M+SKG+ P       +I   C+ GR  + + 
Sbjct: 610 QPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMD 669

Query: 571 LLEKMLSKQ 579
            L  ML  +
Sbjct: 670 RLMGMLENK 678


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 252/537 (46%), Gaps = 28/537 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  ++  L K    Q A+     + R G        + L++A  R   L  A  V   
Sbjct: 129 IDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK 188

Query: 202 MQKA-AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           M K  +  PN +  +  IH L    +L +A +  + M   G  P+  TY  LIK  CD+ 
Sbjct: 189 MSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG 248

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
               A+K++DEM  K C P+  +Y  ++  LC+E                       G+I
Sbjct: 249 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCRE-----------------------GKI 285

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           EEA  +  +M + G  P ++T+ A++NG+C+ G +  A ++L  M    CKPN  +Y   
Sbjct: 286 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 345

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           + GLC   KS +A  ++    +    P+ +TY++++ G  +EG+L+ A ++   M   G 
Sbjct: 346 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 405

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P       LI  LC+ G+++ A   +   + KG +++ V FT+LI G C+ G  ++   
Sbjct: 406 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 465

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L ++M   +      T+   +DAL K+ ++ EA  ++ KM+  GLVP+VVT+  +I  +C
Sbjct: 466 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 525

Query: 561 QVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           + G     LK+LE+M  +  C      Y  +I  LC+ G +EEA  IL  +       + 
Sbjct: 526 RAGETALSLKMLERM-KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 584

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            T  VLV++++  G    A+++   M      P+  +   +    +L   +  A  L
Sbjct: 585 FTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 641



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/584 (24%), Positives = 252/584 (43%), Gaps = 47/584 (8%)

Query: 123 VALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRL---------------- 166
           + ++FF W  RQ  Y +D      +L +L    L   A++ + L                
Sbjct: 19  LGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLM 78

Query: 167 -----MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
                M   G       +S L++  ++      A  V   M         +   T ++ L
Sbjct: 79  GALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNAL 138

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK-GCSPD 280
                +  A  F  ++   G   +      L+   C    + +A ++ ++M  +  C P+
Sbjct: 139 CKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPN 198

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
            V+Y  ++  LC                       + GR+EEA +L  +M + GC P   
Sbjct: 199 SVTYSILIHGLC-----------------------EAGRLEEAFQLKQEMVEKGCQPSTR 235

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TYT ++   C +G  D+A KML +M    C PN  +YT  ++ LC  GK  EA  +    
Sbjct: 236 TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKM 295

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
            +    P  IT++ +++G  +EG +  A  ++  M K    P     N L++ LCR  K 
Sbjct: 296 LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKS 355

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             A   ++  ++ G   + V +  L+ GFC++G L  A ++ + M     +PD  T+T +
Sbjct: 356 YKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTAL 415

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           ID L K GR+E+A  ++  M+ KG+    VT+  +I  +C++G+ +D+  L E M+  + 
Sbjct: 416 IDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRC 475

Query: 581 CRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
             TA  +N  ++ L     L EA  +LGK+++        T  +L+E +   G   L+ K
Sbjct: 476 LTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLK 535

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +  RM      P++     +   L   G+ EEA+T++      G
Sbjct: 536 MLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 579



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 227/518 (43%), Gaps = 88/518 (16%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y ++++ L +    + A  V R M + G+      F+ L+  Y + G + +A  +LS+M+
Sbjct: 272 YTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVME 331

Query: 204 KAAVAPNLLICN-------------------------------TAIHVLVVG----NKLA 228
           K    PN+   N                                  ++LV G     +L 
Sbjct: 332 KGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLN 391

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
            A      M  AG+ P+  T+  LI G C L R++ A  ++  M  KG S D+V++  ++
Sbjct: 392 MAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALI 451

Query: 289 GYLCKEKRIKEVRDLMEKMVNDS--------NLFHD----QGRIEEAKELVNQMSQMGCI 336
              CK  + K+V  L E MV +         N F D      ++ EA  ++ +M + G +
Sbjct: 452 DGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLV 511

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P VVT+T ++ G CR GE   + KML++M   GC PN  +YT  +NGLC+NG+  EA  +
Sbjct: 512 PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETI 571

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI----- 451
           + +      +PN  TY+V++    + G+L  A  +V  MVK G  P     + L+     
Sbjct: 572 LFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVL 631

Query: 452 -------QSLCREGKMDGAKKFMQE----CLN-------------------KGCAV---N 478
                  ++L   G +D      +E    CL+                   K C V   +
Sbjct: 632 SNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTED 691

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           + NF  L+ G C++G + EA  L  DM      PD    ++II+   K  + +   E M 
Sbjct: 692 LYNF--LVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMK 748

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
            +L    VP+  +Y  VIH     GRV++  KL+  ++
Sbjct: 749 LVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 786



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 187/423 (44%), Gaps = 60/423 (14%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   +  +++ L K    + A  +L  M ++GI      F+ L+  + + GK ++  ++ 
Sbjct: 408 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 467

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +          N  +  L    KL +A   L +M   G+ P+V+T+  LI+G+C  
Sbjct: 468 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRA 527

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
                ++K+++ M   GCSP+  +Y  ++  LC                       + GR
Sbjct: 528 GETALSLKMLERMKQAGCSPNVYTYTIIINGLC-----------------------NNGR 564

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +EEA+ ++  MS  G  P+  TY  +V    + G LD+A +++  M  +GC+PN+  Y+A
Sbjct: 565 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 624

Query: 380 FLNGLCHNGKSLEAREMINT---------SEE---------------------------E 403
            L+G   +  ++ AR + +T         SEE                           +
Sbjct: 625 LLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKK 684

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P    Y+ ++ GL +EG++ EA  + ++MVK G FP    I+ +I+  C+  K D  
Sbjct: 685 CGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA-ISSIIEHYCKTCKYDNC 743

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            +FM+  L+     +  ++  +I G   +G ++EA  L+ D+       + V  T  I+ 
Sbjct: 744 LEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEF 803

Query: 524 LSK 526
           L K
Sbjct: 804 LMK 806



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 150/332 (45%), Gaps = 16/332 (4%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
            L+ L K      A  +L  M + G+       + L+  + RAG+   ++ +L  M++A 
Sbjct: 485 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 544

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
            +PN+      I+ L    ++ +A   L  M   G++PN  TY  L+K +    R+  A 
Sbjct: 545 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 604

Query: 267 KLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRI-----KEVRDLMEKMV----NDSNLFHD 316
           +++  M   GC P+   Y  ++ G++     I         DL  + +    ND+N    
Sbjct: 605 QIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSS 664

Query: 317 Q----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                  ++ A ++ +++ + G +P    Y  +V G C+ G + +A ++ Q M  HG  P
Sbjct: 665 HVFRLMDVDHALKIRDEIKKCG-VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 723

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           +  + ++ +   C   K     E +    +  + P+  +Y  V+HGLR EG++ EA  +V
Sbjct: 724 DK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLV 782

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
            ++V+       VE+   I+ L +E + D  K
Sbjct: 783 SDLVRHTGIEEEVEVTPSIEFLMKEEEDDPDK 814


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 153/568 (26%), Positives = 268/568 (47%), Gaps = 20/568 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++      K  + AK +L  M   G++  P  ++ L+  + R G +  A  + 
Sbjct: 284 DLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIK 343

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    +  NL+I NT ++ +    K+ KAL  ++ M   G+ P+  TY+ LI+G+C  
Sbjct: 344 DEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRG 403

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
             +  A +L+DEM  +  +P  ++Y  ++  LC+   ++    ++ +MV +         
Sbjct: 404 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVY 463

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +GR+EE++ ++ +M + G +PDV  Y +++ GFC+   +++A+  L +M  
Sbjct: 464 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 523

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
              +PN  +Y AF++G    G+   A    N        PN   Y+ ++ G  +EG ++E
Sbjct: 524 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 583

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  V R ++ +         ++LI  L R GKM  A     E   KG   N   + SLI 
Sbjct: 584 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 643

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C++G++++A  LL++M +   +PD VTY  +ID L K G +E A  L   +  +GL P
Sbjct: 644 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 703

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKIL 605
             VTY  ++  YC+        +LLE+ML +     A  YN ++   C     E+A  + 
Sbjct: 704 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 763

Query: 606 GKVLRTASKADASTC--HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
            ++L    K  AST   + L+E Y   G    A  +   M  +  IP+      + +   
Sbjct: 764 QEMLE---KGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 820

Query: 664 LEGKSEEADTLMLRFVERGHIQPKSEEH 691
             G   EA  L L   ER ++ P ++ +
Sbjct: 821 KAGMMGEAKRLWLEMQER-NVMPTAKTY 847



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 287/611 (46%), Gaps = 40/611 (6%)

Query: 78  VREVCRLIELRSAWSPKLEGELRNLLRSLKPRQI-CAVLRSQ-ADERVALQFFYWADRQW 135
           VRE+  L+   + W   +E    ++ + L    I   +L++Q  D +  L FFYW+  + 
Sbjct: 27  VREITTLLNSHN-WQALMESS--DIPKKLNTDIIRSVILQNQVGDPKRLLNFFYWSQHKM 83

Query: 136 ---RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR----------------RGIECRP 176
                + D  V   +   L  +     A  +++ + R                R     P
Sbjct: 84  GTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSP 143

Query: 177 EA--FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
            +  F  LM +Y + G L  A+ V    +     P+LL CN+ +  L+ GNK+    +  
Sbjct: 144 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVF 203

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
           + M    + P+V TY  +I  +C +  +KDA +++ EM  KGCSP+ V+Y  ++G LC+ 
Sbjct: 204 DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRA 263

Query: 295 KRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           + + E  +L   MV+              N F  + R  EAK ++ +M  +G  P+ +TY
Sbjct: 264 RLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITY 323

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
            A+++GF R G+++QA ++  +M   G + N + +   LNG+C  GK  +A E++    E
Sbjct: 324 NALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 383

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
           +   P++ TYS+++ G  R   ++ A +++ EM K+   PT +  +++I  LCR G + G
Sbjct: 384 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 443

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
               ++E +  G   N V +T+L+    ++G +EE+  +L+ M      PD   Y ++I 
Sbjct: 444 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 503

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
              K  R+EEA   +M+ML + L P   TY   I  Y + G +E   +   +MLS     
Sbjct: 504 GFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP 563

Query: 583 TA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               Y  +IE  C  G + EA  +   +L      D  T  VL+      G    A+ + 
Sbjct: 564 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 623

Query: 641 CRMFNRNLIPD 651
             +  + L+P+
Sbjct: 624 SELQEKGLLPN 634



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 154/559 (27%), Positives = 267/559 (47%), Gaps = 18/559 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  M+    K    + AKRVL  M  +G  C P   +Y  ++    RA  L  A+ 
Sbjct: 214 DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKG--CSPNLVTYNVIIGGLCRARLLDEAIE 271

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M    + P+L   +  I+   +  +  +A   L  M   G+ P  +TYN LI G+ 
Sbjct: 272 LKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFM 331

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK----EKRIKEVRDLMEKMVN-DSN 312
               I+ A ++ DEM   G   + + + T++  +CK    EK ++ ++++MEK V  DS 
Sbjct: 332 RQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQ 391

Query: 313 LF------HDQGR-IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            +      H +G+ +  A EL+++M +    P V+TY+ ++NG CR G L     +L++M
Sbjct: 392 TYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREM 451

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
             +G KPN V YT  +      G+  E+R ++    E+   P+   Y+ ++ G  +  ++
Sbjct: 452 VMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRM 511

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA   + EM+++   P        I    + G+M+ A ++  E L+ G   NV  +T+L
Sbjct: 512 EEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTAL 571

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G C++G++ EA S+   +   +   D  TY+ +I  LS+NG++ EA  +  ++  KGL
Sbjct: 572 IEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGL 631

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGK 603
           +P   TY ++I   C+ G V+   +LLE+M  K        YN +I+ LC  G +E A  
Sbjct: 632 LPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKN 691

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           +   +       +  T   +V+ Y     P  A+++   M  R + PD  +   +     
Sbjct: 692 LFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCC 751

Query: 664 LEGKSEEADTLMLRFVERG 682
            E K E+A  L    +E+G
Sbjct: 752 KEEKFEKALDLFQEMLEKG 770



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 253/535 (47%), Gaps = 50/535 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y +++  L +    QG   +LR M   G++     ++ LM A+++ G++  +  +L  
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M++  + P++   N+ I       ++ +A  +L  M    + PN  TY   I GY     
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 545

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSN 312
           ++ A +  +EM   G  P+   Y  ++   CKE  + E          R +++ +   S 
Sbjct: 546 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 605

Query: 313 LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L H     G++ EA  + +++ + G +P+  TY ++++G C+ G +D+A ++L++M   G
Sbjct: 606 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 665

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG----------- 418
             P+ V+Y   ++GLC  G+   A+ + +  E    TPN +TY+ ++ G           
Sbjct: 666 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAF 725

Query: 419 -------LR-----------------REGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
                  LR                 +E K  +A D+ +EM++KGF  T V  N LI+  
Sbjct: 726 QLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAST-VSFNTLIEGY 784

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ GK+  A   ++E + K    N V +TSLI   C+ G + EA  L  +M      P  
Sbjct: 785 CKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 844

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            TYT+++      G + E + L  +M++KG+ P  +TY  +I  YC+ G V +  KL ++
Sbjct: 845 KTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDE 904

Query: 575 MLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           +L K    +  AY+ +I+ LC      E  K+L ++  +  +    TC V+   +
Sbjct: 905 ILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGF 959



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 226/500 (45%), Gaps = 34/500 (6%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R R +   Y   ++  SK    + A R    M   G+      ++ L+  + + G +  A
Sbjct: 525 RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEA 584

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             V   +    V  ++   +  IH L    K+ +A      +Q  G+ PN  TYN LI G
Sbjct: 585 FSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISG 644

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
            C    +  A +L++EM +KG +PD V+Y  ++  LCK                      
Sbjct: 645 SCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCK---------------------- 682

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G IE AK L + +   G  P+ VTY A+V+G+C+      A ++L++M   G  P+  
Sbjct: 683 -AGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAF 741

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            Y   LN  C   K  +A ++     E+ +  + ++++ ++ G  + GKL EA  ++ EM
Sbjct: 742 IYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEM 800

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           ++K F P  V    LI   C+ G M  AK+   E   +        +TSL+ G+   G++
Sbjct: 801 IEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNM 860

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            E  +L ++M     +PD +TY  +IDA  + G V EA +L  ++L KG+  +V  Y  +
Sbjct: 861 SEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDAL 920

Query: 556 IHRYCQVGRVEDLLKLLEKM------LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           I   C+     ++LKLL ++      L    C      +       G ++EA ++L  ++
Sbjct: 921 IQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSV----IARGFQIAGNMDEAAEVLRSMV 976

Query: 610 RTASKADASTCHVLVESYLN 629
           +    ++ ++   LV+   N
Sbjct: 977 KFGWVSNTTSLGDLVDGNQN 996



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 213/445 (47%), Gaps = 13/445 (2%)

Query: 143  VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            +Y  ++E   K      A  V R +  R +    + +S L+   SR GK+  A  + S +
Sbjct: 567  IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 626

Query: 203  QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            Q+  + PN    N+ I        + KA + LE M + GI P+++TYN LI G C    I
Sbjct: 627  QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 686

Query: 263  KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----NDSNLFH-- 315
            + A  L D++  +G +P+ V+Y  ++   CK K       L+E+M+      D+ +++  
Sbjct: 687  ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 746

Query: 316  -----DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                  + + E+A +L  +M + G     V++  ++ G+C+ G+L +A  +L++M     
Sbjct: 747  LNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQF 805

Query: 371  KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
             PN V+YT+ ++  C  G   EA+ +    +E    P A TY+ ++HG    G +SE   
Sbjct: 806  IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSA 865

Query: 431  VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
            +  EMV KG  P  +   ++I + CREG +  A K   E L KG  ++V  + +LI+  C
Sbjct: 866  LFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALC 925

Query: 491  QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
            +K +  E L LL+++          T + I       G ++EA E++  M+  G V    
Sbjct: 926  KKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTT 985

Query: 551  TYRTVIHRYCQVGRVEDLLKLLEKM 575
            +   ++         ED   LL++M
Sbjct: 986  SLGDLVDGNQNGANSEDSDNLLKQM 1010


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 267/555 (48%), Gaps = 11/555 (1%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  ++E LS       A  + R M  RG E   E    L+ A  +AGK+  A  + 
Sbjct: 193 DYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIY 252

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +    VA + +  N+ +       ++   L+ L +M      P++ TYN L+ G+   
Sbjct: 253 QTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRA 312

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------ 313
           +R+ DA++L   +   GC P+  +Y T++  L   +R++E +   ++ ++  +       
Sbjct: 313 NRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKG 372

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
             D  RI+EA EL  ++   GC P+VV YTAV++G  + G ++   K  + M    C P 
Sbjct: 373 LADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPT 432

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             +YT  ++GLC      +A ++     ++   P+ ITY+ ++ G  +  K+ EA  ++ 
Sbjct: 433 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 492

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            M+ KG  PT V    ++   C+   ++ AK+ + +   +GC   +  FTSL+  +  KG
Sbjct: 493 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKG 552

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
             EEA  +L +M      PD + YT++ID L   GRV EA  +   M+ KG  P  +TY 
Sbjct: 553 RAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYG 612

Query: 554 TVIHRYCQVGRVE---DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           T+I  + ++G VE   ++L+L+ K      C  AYN +++       +++A  +  +++ 
Sbjct: 613 TIIQNFSKIGNVEAAGEILELMAKSGVGPDC-FAYNSLMDGYVKLERVDQAFGVYDRMVA 671

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV-SERLILEGKSE 669
           +  K +A T +VL+      G    A+ +   M  ++ +P   +   +  + L   G+  
Sbjct: 672 SGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVS 731

Query: 670 EADTLMLRFVERGHI 684
           EA +     ++RG I
Sbjct: 732 EAFSQFQEMIDRGII 746



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 206/417 (49%), Gaps = 17/417 (4%)

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +AL  L+ M   G+ P+V+  N ++ G C   +I  AI+L  EMP  GC P  VSY T
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMG 334
           V+  L    ++ E       M+++         + L H     G+ +    L+NQ  +  
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             PDV  YT+V++G+C+ G+LD   K+L++M   GC P+  +Y   ++ LC  G+  EA 
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E+     +     + +T+  ++  L   GKL EAC++ REM+++G+ P     + LI +L
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ GK+D A +  Q  + K  A + V + SL+ G+C+ G +++ L LL  M  C   PD 
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            TY  ++   S+  R+++A EL   + S G  P   TY T+I       R+E+     ++
Sbjct: 300 QTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE 359

Query: 575 MLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            L       +Y  VI+ L     ++EA ++  K+       +      +++  L  G
Sbjct: 360 ALD----VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAG 412



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 226/471 (47%), Gaps = 19/471 (4%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +++ ++   + + ++  A  +   ++ A  +PN++     I  L+   ++   L+  E M
Sbjct: 365 SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM 424

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
             +   P   TY  +I G C    + DA K+ ++M  KGC PD ++Y T++    K  ++
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 484

Query: 298 KEVRDLMEKM---------VNDSNLFHDQGR---IEEAKELVNQMSQMGCIPDVVTYTAV 345
            E R L++ M         V   ++ H   +   I EAKE++ QM + GC P +  +T++
Sbjct: 485 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 544

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++ +   G  ++A ++L +M   GC P+ + YT+ ++ L   G+  EAR + ++  E+  
Sbjct: 545 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 604

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+A+TY  ++    + G +  A +++  M K G  P     N L+    +  ++D A  
Sbjct: 605 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 664

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD---PDTVTYTTIID 522
                +  G   N V F  L+ G  + G  + A SL  +M   +KD   P  V+YT +ID
Sbjct: 665 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEML--EKDEVPPTLVSYTILID 722

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQK 580
            L K GRV EA     +M+ +G++P   TY ++I+   + GR+ +  KL+E M  L    
Sbjct: 723 GLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNP 782

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
              AY+ +I  L     ++ A  +  ++++     +  T  VL   +   G
Sbjct: 783 DVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 833



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 145/596 (24%), Positives = 258/596 (43%), Gaps = 47/596 (7%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLR 193
           R+R D  +Y  ++    K        ++L  M   G  C P+A +Y ++     + G++ 
Sbjct: 119 RFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAG--CIPDAAAYFVLIDPLCKLGRVD 176

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  +   M+K+    + +   T I  L    KL +A      M   G  P +   + LI
Sbjct: 177 EAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLI 236

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
              C   ++ +A ++   +  K  +  +V+Y ++M   CK  R+ +   L+ +MV   N 
Sbjct: 237 FALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNF 296

Query: 314 ------------FHDQGRIEEAKELVNQMSQMGCIP------------------------ 337
                       F    R+++A EL   +S  GC P                        
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF 356

Query: 338 -----DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
                DV++YT V+ G      +D+A ++ +++   GC PN V+YTA ++GL   G+  +
Sbjct: 357 FDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIED 416

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
             +           P   TY+VV+ GL +   L +AC V  +MV+KG  P  +    LI 
Sbjct: 417 GLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLID 476

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
              +  KMD A+K +   L KG     V + S++ GFC+   + EA  ++  M     +P
Sbjct: 477 GFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEP 536

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
               +T+++      GR EEA +++ +M ++G  P V+ Y ++I      GRV +   + 
Sbjct: 537 GLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVF 596

Query: 573 EKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           + M+ K     A  Y  +I+N    G +E AG+IL  + ++    D    + L++ Y+  
Sbjct: 597 DSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKL 656

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
                A+ V  RM    + P+      +   L  +GK++ A +L    +E+  + P
Sbjct: 657 ERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPP 712



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 137/572 (23%), Positives = 247/572 (43%), Gaps = 77/572 (13%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           +A K+  A+ +   M      P ++  NT I  L   +K+ +A +F   M   G  P+V+
Sbjct: 32  KARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVI 91

Query: 248 TYNCL----------------------------------IKGYCDLHRIKDAIKLIDEMP 273
            +  L                                  I GYC    +    K+++EM 
Sbjct: 92  AFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEML 151

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIE 321
             GC PD  +Y+ ++  LCK  R+ E  +L E+M     L              + G+++
Sbjct: 152 AAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLD 211

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA EL  +M + G  P +    +++   C+ G++D+A ++ Q +       + V+Y + +
Sbjct: 212 EACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLM 271

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G C  G+  +  +++    E    P+  TY++++ G  R  +L +A ++ + +   G  
Sbjct: 272 DGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCK 331

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLN----------------------------- 472
           P       +IQ L    +M+ AK F  E L+                             
Sbjct: 332 PNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKT 391

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            GC+ NVV +T++I G  + G +E+ L   +DM      P   TYT +ID L K   + +
Sbjct: 392 AGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPD 451

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIE 590
           A ++  +M+ KG VP  +TY T+I  + +  ++++  KLL+ ML+K    TA  Y  ++ 
Sbjct: 452 ACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVH 511

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
             C    + EA +++ ++     +        L+  YL+KG    AY+V   M  R   P
Sbjct: 512 GFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAP 571

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           D+ L   + + L   G+  EA  +    +E+G
Sbjct: 572 DVILYTSLIDLLFSTGRVPEARHVFDSMIEKG 603



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 200/413 (48%), Gaps = 15/413 (3%)

Query: 171 GIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
           G  C P   +Y +V     +A  L +A  V   M +    P+ +   T I      +K+ 
Sbjct: 426 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 485

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           +A + L+ M   G  P  +TY  ++ G+C L  I +A ++I +M  +GC P    + +++
Sbjct: 486 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 545

Query: 289 GYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCI 336
            Y   + R +E   ++ +M                +L    GR+ EA+ + + M + GC 
Sbjct: 546 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 605

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PD +TY  ++  F ++G ++ A ++L+ M   G  P+  +Y + ++G     +  +A  +
Sbjct: 606 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 665

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG-FFPTPVEINLLIQSLC 455
            +        PNA+T++V+MHGL ++GK   A  + +EM++K    PT V   +LI  L 
Sbjct: 666 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLG 725

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + G++  A    QE +++G       +TSLI    + G + EA  L++DM     +PD  
Sbjct: 726 KAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQ 785

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
            Y+ +I  L  +  V+ A ++  +M+ +G  P  VTY+ +   +   GR  DL
Sbjct: 786 AYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDL 838



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 3/131 (2%)

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
           +EEA + + +M + GL+P VV    V++  C+  +++  ++L  +M S   +    +YN 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           VI  L S   ++EA K    ++    + D      L+  +   G P + + +  +   R 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 648 LIPDLKLCKKV 658
             PD+ L   V
Sbjct: 120 FRPDVFLYTSV 130



 Score = 40.4 bits (93), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 4/117 (3%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMYVL 199
           + Y ++++ L K      A    + M  RGI   PE  +Y  + YS  +AG++  A  ++
Sbjct: 715 VSYTILIDGLGKAGRVSEAFSQFQEMIDRGI--IPECHTYTSLIYSLAKAGRIPEAKKLV 772

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             M K  V P++   +  I  L+  + +  A    + M   G  PN +TY  L +G+
Sbjct: 773 EDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 829


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 235/484 (48%), Gaps = 20/484 (4%)

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
           +P+++     I+ L    +L +A   LER   AG  P+ +TYN  I G C   R+ DA +
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FH 315
           L+ +M  K C P  V+Y  ++  L K  R+ E   ++E+MV   N               
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM----YHHGCK 371
             GR+EEA+ +   M   GC PD   YTA++ G C+ G+ ++A  + ++     +H    
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINT-SEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           P+ V+YT+ ++GLC  G+ LEAR++ +  + E  + P+A+TY+ ++ GL + G++ E C+
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
              EM  +G+ P  V    LI    +   +  A +  ++ L  G  V+ V +  ++ G C
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           + G + EA +    M         VTY+ ++D     G V  A EL  +ML +G  P +V
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCS-FGYLEEAGKILGK 607
           +Y  +I   C+ G++       EK+L ++ C   Y  N  +  LC     + +  ++   
Sbjct: 364 SYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFES 423

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           ++   +  +  +  +L++     G   +A ++   M +R + PD+ +   +   L + G+
Sbjct: 424 MVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGR 483

Query: 668 SEEA 671
            +EA
Sbjct: 484 VDEA 487



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 222/456 (48%), Gaps = 22/456 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y + ++ L K +    A ++L+ M  +  +C P   +Y  L+    +AG+L  AM 
Sbjct: 41  DYVTYNVFIDGLCKAERVDDAFQLLKKMDEK--KCLPTTVTYTALVDGLLKAGRLDEAMA 98

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL  M +   +P L      I  L    ++ +A R    M   G  P+   Y  LIKG C
Sbjct: 99  VLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLC 158

Query: 258 DLHRIKDAIKLIDEMPLK----GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
              + ++A  L  E   +       PD V+Y +++  LCK  RI E R + +    +   
Sbjct: 159 KSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGF 218

Query: 314 FHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
             D              GR+EE  E  ++M   G  PD VTY A+++GF +   + +A +
Sbjct: 219 IPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHR 278

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           + +QM   G   +TV+Y   L+GLC  G+  EA       EE       +TYS +M G  
Sbjct: 279 VYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFC 338

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
            EG +S A ++ R M+ +G  P  V  N++I+ LCR GK+  A  + ++ L +    +V 
Sbjct: 339 SEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVY 398

Query: 481 NFTSLIRGFCQKGD-LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
            F + + G CQ+ D + + + L + M      P+  +Y+ ++D + + G +E A E+  +
Sbjct: 399 TFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFRE 458

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           M+S+G+ P VV + T+I   C  GRV++ L++  ++
Sbjct: 459 MVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL 494



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 213/431 (49%), Gaps = 37/431 (8%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL-- 199
           Y ++++ LSK    + A+R+   M   G  CRP+AF Y  L+    ++GK   A Y L  
Sbjct: 115 YTVVIDGLSKAGRVEEARRIFVDMLGNG--CRPDAFVYTALIKGLCKSGKPEEA-YALYK 171

Query: 200 ---SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL-------AGITPNVLTY 249
              +    A   P+++   + I      + L KA R LE  Q+        G  P+ +TY
Sbjct: 172 EANARKHHATAVPDVVTYTSLI------DGLCKAGRILEARQVFDDEAVERGFIPDAVTY 225

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             +I G C L R+++  +   EM  +G  PD V+Y  ++    K K I +   +  +M+ 
Sbjct: 226 TSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQ 285

Query: 310 DS--------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                     N+  D     GR+ EA      M + GC+  VVTY+A+++GFC  G +  
Sbjct: 286 SGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSA 345

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A ++ ++M   GC+PN VSY   + GLC  GK  +A        +    P+  T++  +H
Sbjct: 346 AVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLH 405

Query: 418 GL-RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
           GL +R   +S+  ++   MV +G  P     ++L+  +CR G ++ A +  +E +++G A
Sbjct: 406 GLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVA 465

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            +VV F +LIR  C  G ++EAL +  ++   +  PD  +Y +++D LS+  R+EEA  L
Sbjct: 466 PDVVVFNTLIRWLCIAGRVDEALEVFRELER-RSAPDAWSYWSLLDGLSRCERMEEARLL 524

Query: 537 MMKMLSKGLVP 547
              M  +G  P
Sbjct: 525 SFHMKLQGCAP 535



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 195/397 (49%), Gaps = 35/397 (8%)

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI 336
           CSPD V++  V+  LC+EKR+ E   ++E+ V                       + GC 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAV-----------------------RAGCE 39

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PD VTY   ++G C+   +D A ++L++M    C P TV+YTA ++GL   G+  EA  +
Sbjct: 40  PDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAV 99

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +    E+  +P   TY+VV+ GL + G++ EA  +  +M+  G  P       LI+ LC+
Sbjct: 100 LEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCK 159

Query: 457 EGKMDGAKKFMQEC---LNKGCAV-NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK-D 511
            GK + A    +E     +   AV +VV +TSLI G C+ G + EA  + DD  + +   
Sbjct: 160 SGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFI 219

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD VTYT+IID L K GRVEE  E   +M ++G  P  VTY  +I  + +   +    ++
Sbjct: 220 PDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRV 279

Query: 572 LEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
             +ML          YN +++ LC  G + EA      +      A   T   L++ + +
Sbjct: 280 YRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCS 339

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
           +G    A ++  RM +R   P+L     VS  +I+ G
Sbjct: 340 EGNVSAAVELFRRMLDRGCEPNL-----VSYNIIIRG 371



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 188/357 (52%), Gaps = 7/357 (1%)

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           M C PD+V +T V+NG CR   LD+A  +L++    GC+P+ V+Y  F++GLC   +  +
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A +++   +E+   P  +TY+ ++ GL + G+L EA  V+ +MV+KG  PT     ++I 
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD- 511
            L + G+++ A++   + L  GC  +   +T+LI+G C+ G  EEA +L  +    K   
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180

Query: 512 ---PDTVTYTTIIDALSKNGRVEEATELM-MKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
              PD VTYT++ID L K GR+ EA ++   + + +G +P  VTY ++I   C++GRVE+
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240

Query: 568 LLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
             +   +M ++  +     Y  +I+       + +A ++  ++L++ +     T +++++
Sbjct: 241 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 300

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                G    AY     M  R  +  +     + +    EG    A  L  R ++RG
Sbjct: 301 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 357



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 23/296 (7%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R   Y  D + Y  +++   K K+   A RV R M + G       ++ ++    +AG++
Sbjct: 249 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 308

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A      M++      ++  +  +        ++ A+    RM   G  PN+++YN +
Sbjct: 309 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 368

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I+G C   ++  A    +++  +   PD  ++   +  LC  +R+  V D          
Sbjct: 369 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLC--QRLDTVSD---------- 416

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                       EL   M   G  P++ +Y+ +++G CR G L+ A ++ ++M   G  P
Sbjct: 417 ----------GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAP 466

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           + V +   +  LC  G+  EA E+    E     P+A +Y  ++ GL R  ++ EA
Sbjct: 467 DVVVFNTLIRWLCIAGRVDEALEVFRELERR-SAPDAWSYWSLLDGLSRCERMEEA 521



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 37/211 (17%)

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           C+ ++V FT +I G C++  L+EA S+L+       +PD VTY   ID L K  RV++A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENL 592
           +L+ KM  K  +PT VTY  ++    + GR+++ + +LE+M+ K    T   Y  VI+ L
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
              G +EEA +I   +L    + DA      V + L KG                     
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDA-----FVYTALIKG--------------------- 156

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERGH 683
            LCK         GK EEA  L      R H
Sbjct: 157 -LCKS--------GKPEEAYALYKEANARKH 178


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 237/512 (46%), Gaps = 28/512 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R+ I C   +F+ L+  +    KL  A+     + K  + P+++  NT +H L V ++
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDR 164

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++AL    +M      PNV+T+  L+ G C   RI +A+ L+D M   G  P +++Y T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQM 333
           ++  +CK        DL+ KM   S++  +              GR  +A+ L  +M + 
Sbjct: 225 IVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  PD+ TY +++ GFC  G    A+++LQ+M      P+ V+Y A +N     GK  EA
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            E+ +        PN ITYS ++ G  ++ +L  A  +   M  KG  P  +  N LI  
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C   ++D   + + E    G   +   + +LI GF   GDL  AL LL +M      PD
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSK------------GLVPTVVTYRTVIHRYCQ 561
            VT  T++D L  NG++++A E M K++ K            G+ P V TY  +I     
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 562 VGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G+  +  +L E+M  +        Y+ +I+ LC    L+EA ++   +   +   +  T
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              L+  Y   G      ++ C M  R ++ +
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 248/516 (48%), Gaps = 39/516 (7%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L   +     L +A+ + S M ++   P+++     + V+V   +    +   ++M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I  ++ ++  LIK +C   ++  A+    ++   G  PD V++ T++  LC E R+ E  
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                     NLFH             QM +  C P+VVT+T ++NG CR G + +A  +
Sbjct: 170 ----------NLFH-------------QMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE-EWWTPNAITYSVVMHGLR 420
           L +M   G +P  ++Y   ++G+C  G ++ A +++   EE     PN + YS ++  L 
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLC 266

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           ++G+ S+A ++  EM +KG FP     N +I   C  G+   A++ +QE L +  + +VV
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +LI  F ++G   EA  L D+M      P+T+TY+++ID   K  R++ A  +   M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYL 598
            +KG  P ++T+ T+I  YC   R++D ++LL +M         T YN +I      G L
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGI---PLLAYKV---------ACRMFNR 646
             A  +L +++ +    D  TC  L++   + G     L  +KV         A   FN 
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN- 505

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            + PD++    +   LI EGK  EA+ L      RG
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 224/447 (50%), Gaps = 38/447 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           ++Y  +++ L K      A+ +   M  +GI   P+ F+Y  ++V +  +G+  +A  +L
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI--FPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  ++P+++  N  I+  V   K  +A    + M   GI PN +TY+ +I G+C  
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           +R+  A  +   M  KGCSP+ +++ T++   C  KRI                      
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI---------------------- 411

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            ++  EL+++M++ G + D  TY  +++GF  VG+L+ A  +LQ+M   G  P+ V+   
Sbjct: 412 -DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470

Query: 380 FLNGLCHNGKSLEAREMINTSEEE-----------WWTPNAITYSVVMHGLRREGKLSEA 428
            L+GLC NGK  +A EM    ++               P+  TY++++ GL  EGK  EA
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            ++  EM  +G  P  +  + +I  LC++ ++D A +      +K  + NVV FT+LI G
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +C+ G +++ L L  +M       + +TY T+I    K G +  A ++  +M+S G+ P 
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            +T R ++        ++  + +LEK+
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 216/466 (46%), Gaps = 61/466 (13%)

Query: 174 CRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           CRP    F+ LM    R G++  A+ +L  M +  + P  +   T +  +        AL
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 232 RFLERMQ-LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
             L +M+ ++ I PNV+ Y+ +I   C   R  DA  L  EM  KG  PD  +Y +++  
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
            C   R  +   L+++M+               N F  +G+  EA+EL ++M   G IP+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            +TY+++++GFC+   LD A+ M   M   GC PN +++   ++G C   +  +  E+++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE------------ 446
              E     +  TY+ ++HG    G L+ A D+++EM+  G  P  V             
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 447 ----------------------------------INLLIQSLCREGKMDGAKKFMQECLN 472
                                              N+LI  L  EGK   A++  +E  +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +G   + + ++S+I G C++  L+EA  + D M      P+ VT+TT+I+   K GRV++
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
             EL  +M  +G+V   +TY T+I  + +VG +   L + ++M+S 
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 235/462 (50%), Gaps = 39/462 (8%)

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           +KL  AL    ++   G+ P+V+T+N L+ G C   R+ +A+ L  +M    C P+ V++
Sbjct: 128 SKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            T+M  LC+E                       GRI EA  L+++M + G  P  +TY  
Sbjct: 188 TTLMNGLCRE-----------------------GRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 345 VVNGFCRVGELDQAKKMLQQMYH-HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
           +V+G C++G+   A  +L++M       PN V Y+A ++ LC +G+  +A+ +    +E+
Sbjct: 225 IVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+  TY+ ++ G    G+ S+A  +++EM+++   P  V  N LI +  +EGK   A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           ++   E L +G   N + ++S+I GFC++  L+ A  +   M      P+ +T+ T+ID 
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDG 404

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR- 582
                R+++  EL+ +M   GLV    TY T+IH +  VG +   L LL++M+S   C  
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPD 464

Query: 583 -TAYNQVIENLCSFGYLEEAGKILGKVLRTASK------------ADASTCHVLVESYLN 629
               + +++ LC  G L++A ++  KV++ + K             D  T ++L+   +N
Sbjct: 465 IVTCDTLLDGLCDNGKLKDALEMF-KVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           +G  L A ++   M +R ++PD      + + L  + + +EA
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 224/463 (48%), Gaps = 24/463 (5%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           L  G+ ++  ++DAI L  +M      P  V +  +MG + + +R   V  L +KM    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                         F    ++  A     +++++G  PDVVT+  +++G C    + +A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            +  QM+   C+PN V++T  +NGLC  G+ +EA  +++   E+   P  ITY  ++ G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 420 RREGKLSEACDVVREMVK-KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
            + G    A D++R+M +     P  V  + +I SLC++G+   A+    E   KG   +
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +  + S+I GFC  G   +A  LL +M   K  PD VTY  +I+A  K G+  EA EL  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSF 595
           +ML +G++P  +TY ++I  +C+  R+ D  + +  +++ + C      +N +I+  C  
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
             +++  ++L ++  T   AD +T + L+  +   G    A  +   M +  L PD+  C
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVF 698
             + + L   GK ++A       +E   +  KS++ L     F
Sbjct: 469 DTLLDGLCDNGKLKDA-------LEMFKVMQKSKKDLDASHPF 504


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 151/555 (27%), Positives = 257/555 (46%), Gaps = 55/555 (9%)

Query: 169 RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
           R+G+      FS  + A+ + GK+ +A+ +   M+K  V+PN++  N  IH L     L 
Sbjct: 239 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 298

Query: 229 KALRFLERMQLAGI-----------------------------------TPNVLTYNCLI 253
           +A RF E+M   G+                                   TPN + YN LI
Sbjct: 299 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 358

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND--- 310
            GYC +  + DA+++  +M  KG +P+ V+  +++   CK  ++++   ++E+M++    
Sbjct: 359 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 418

Query: 311 ------SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                 + + H      R E A   + +M      P+    T +V G C+ G+   A ++
Sbjct: 419 INPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 478

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             ++   G   N V+  A ++GLC  G   EA  ++    E  +  + ITY+ ++ G  +
Sbjct: 479 WFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCK 538

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           EGK+ E   +  EMVK+G  P     NLLI  +CR GK+D A     EC ++    NV  
Sbjct: 539 EGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYT 598

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +  +I G+C+   +EE   L  ++     + ++V Y T+I A  +NG   EA +L   M 
Sbjct: 599 YGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMR 658

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-----LSKQKCRTAYNQVIENLCSFG 596
           SKG+ PT  TY ++IH  C +GR+ED   L+++M     L    C TA   +I   C  G
Sbjct: 659 SKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA---LIGGYCKLG 715

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            +++   +L ++       +  T  V+++ Y   G    A K+   M  + ++PD     
Sbjct: 716 QMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYN 775

Query: 657 KVSERLILEGKSEEA 671
            ++     EGK EE 
Sbjct: 776 VLTNGFCKEGKIEEG 790



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 161/649 (24%), Positives = 291/649 (44%), Gaps = 54/649 (8%)

Query: 75  HPLVREVCRLIELRSAWSPKLEG-ELRNLLRSLKPRQICAV---LRSQADERVALQFFYW 130
           H L++ V  ++      +P L+  + + L+  L P Q  +V   +R   + + AL FFY+
Sbjct: 47  HALLKSVTSILS-----NPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYF 101

Query: 131 ADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL-RLMAR-----------RGIECRPE- 177
           A     +R     Y +++  L  +     A+ +L RL+ R           R IE     
Sbjct: 102 ASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAM 161

Query: 178 --------------AFSYLMVAYS---RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
                         A   L+  Y    R    RNA+ V   +    V P +  C   +  
Sbjct: 162 ADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSS 221

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
           LV  N+L K+    E M+  G++P+V  ++  I  +C   +++DAI+L  +M   G SP+
Sbjct: 222 LVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPN 280

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVN 328
            V+Y  ++  LCK   + E     EKMV D             N      +  EA  ++ 
Sbjct: 281 VVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLK 340

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +  + G  P+ V Y  +++G+C++G L  A ++   M   G  PN+V+  + + G C  G
Sbjct: 341 ETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIG 400

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  +A  ++       ++ N   ++ ++H L    +   A   +REM+ +   P    + 
Sbjct: 401 QMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLT 460

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            L+  LC+EGK   A +     L KG   N+V   +LI G C+ G+++EA+ LL  M   
Sbjct: 461 TLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLER 520

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
               D +TY T+I    K G+VEE  +L  +M+ +G+ P   TY  +IH  C++G++++ 
Sbjct: 521 GFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEA 580

Query: 569 LKLLEKMLSKQKCRTAYNQ--VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           + L  +  S+      Y    +I+  C    +EE  K+  ++L    + ++   + L+ +
Sbjct: 581 VNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRA 640

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           Y   G  + A+K+   M ++ + P       +   +   G+ E+A  L+
Sbjct: 641 YCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLI 689



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 256/522 (49%), Gaps = 15/522 (2%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A+Q F+  ++      + + Y  ++  L K      A R    M + G+      +S L+
Sbjct: 265 AIQLFFDMEK-LGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLI 323

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
               +  K   A  VL    +    PN ++ NT I        L  ALR    M   GI 
Sbjct: 324 NGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGIN 383

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           PN +T N +I+G+C + +++ A  +++EM  +G S +  ++ T++ +LC   R +     
Sbjct: 384 PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRF 443

Query: 304 MEKMV------NDSNL------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           + +M+      ND  L         +G+  +A EL  ++ + G   ++VT  A+++G C+
Sbjct: 444 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 503

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            G + +A ++L++M   G   + ++Y   ++G C  GK  E  ++     ++   P+  T
Sbjct: 504 TGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 563

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y++++HG+ R GKL EA ++  E   +   P      ++I   C+  K++  +K   E L
Sbjct: 564 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 623

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            +   +N V + +LIR +C+ G+  EA  L DDM      P T TY+++I  +   GR+E
Sbjct: 624 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRME 683

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVI 589
           +A  L+ +M  +GL+P VV Y  +I  YC++G+++ ++ +L++M S      +  Y  +I
Sbjct: 684 DAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMI 743

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +     G ++ A K+L +++      D  T +VL   +  +G
Sbjct: 744 DGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEG 785



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 221/451 (49%), Gaps = 12/451 (2%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  + +VY  +++   K      A R+   M  +GI       + ++  + + G++  A 
Sbjct: 347 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAE 406

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M     + N     T IH L + ++   ALRFL  M L  + PN      L+ G 
Sbjct: 407 CILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGL 466

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   +  DA++L   +  KG   + V+   ++  LCK   ++E   L++KM+    +   
Sbjct: 467 CKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDK 526

Query: 317 ------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                       +G++EE  +L  +M + G  PD  TY  +++G CR+G+LD+A  +  +
Sbjct: 527 ITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE 586

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
                  PN  +Y   ++G C   K  E  ++      +    N++ Y+ ++    R G 
Sbjct: 587 CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGN 646

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             EA  +  +M  KG  PT    + LI  +C  G+M+ AK  + E   +G   NVV +T+
Sbjct: 647 TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA 706

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G+C+ G +++ +++L +M      P+ +TYT +ID  SK+G ++ A +L+ +M+ KG
Sbjct: 707 LIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG 766

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           +VP  VTY  + + +C+ G++E+  K+ + M
Sbjct: 767 IVPDTVTYNVLTNGFCKEGKIEEGFKICDYM 797



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 206/414 (49%), Gaps = 12/414 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+ +L  M  RG    P AF+ ++       +  +A+  L  M    + PN  +  T + 
Sbjct: 405 AECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVG 464

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    K + A+    R+   G   N++T N LI G C    +++A++L+ +M  +G   
Sbjct: 465 GLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 524

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQ---GRIEEAKELV 327
           DK++Y T++   CKE +++E   L  +MV           + L H     G+++EA  L 
Sbjct: 525 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 584

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           N+      +P+V TY  +++G+C+  ++++ +K+  ++     + N+V Y   +   C N
Sbjct: 585 NECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRN 644

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G ++EA ++ +    +   P   TYS ++HG+   G++ +A  ++ EM K+G  P  V  
Sbjct: 645 GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 704

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             LI   C+ G+MD     +QE  +     N + +T +I G+ + GD++ A  LL +M  
Sbjct: 705 TALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVG 764

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
               PDTVTY  + +   K G++EE  ++   M  +GL    +TY T++H + Q
Sbjct: 765 KGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQ 818



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 157/349 (44%), Gaps = 23/349 (6%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           ++  L KT   Q A R+L+ M  RG       ++ L+    + GK+     +   M K  
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           + P+    N  IH +    KL +A+      +   + PNV TY  +I GYC   +I++  
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 616

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKEL 326
           KL  E+  +    + V Y T++   C+                        G   EA +L
Sbjct: 617 KLFTELLTQNLELNSVVYNTLIRAYCR-----------------------NGNTVEAFKL 653

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
            + M   G  P   TY+++++G C +G ++ AK ++ +M   G  PN V YTA + G C 
Sbjct: 654 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 713

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G+  +   ++         PN ITY+V++ G  + G +  A  ++ EMV KG  P  V 
Sbjct: 714 LGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVT 773

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            N+L    C+EGK++   K       +G  ++ + +T+L+ G+ Q   L
Sbjct: 774 YNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSAL 822



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 167/360 (46%), Gaps = 38/360 (10%)

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           ++  G  P V T T +++   +  EL+++  + + M   G  P+   ++  +N  C  GK
Sbjct: 203 LANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGK 261

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A ++    E+   +PN +TY+ ++HGL + G L EA     +MVK G   T +  ++
Sbjct: 262 VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSV 321

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI  L +  K + A   ++E L KG   N V + +LI G+C+ G+L +AL +  DM    
Sbjct: 322 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 381

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
            +P++VT  +II    K G++E+A  ++ +MLS+G       + T+IH  C   R E  L
Sbjct: 382 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 441

Query: 570 KLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           + L +ML  + +        ++  LC  G   +A ++  ++L     A+  T + L+   
Sbjct: 442 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHG- 500

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
                                     LCK         G  +EA  L+ + +ERG +  K
Sbjct: 501 --------------------------LCKT--------GNMQEAVRLLKKMLERGFVLDK 526



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 7/248 (2%)

Query: 447 INLLIQSLCREGKMDG---AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
           ++LLI   C + +  G   A    +   NKG    V   T L+    +  +LE++  + +
Sbjct: 177 VDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFE 236

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
            M      PD   ++T I+A  K G+VE+A +L   M   G+ P VVTY  +IH  C+ G
Sbjct: 237 TMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHG 295

Query: 564 RVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
            +++  +  EKM+      T   Y+ +I  L       EA  +L + L      +    +
Sbjct: 296 NLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYN 355

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
            L++ Y   G    A ++   M ++ + P+      + +     G+ E+A+ ++   + R
Sbjct: 356 TLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSR 415

Query: 682 G-HIQPKS 688
           G  I P +
Sbjct: 416 GFSINPGA 423


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 271/561 (48%), Gaps = 42/561 (7%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           +G++  + +MA  G  C P   SY MV     + G++  A  +   M      PN++  N
Sbjct: 119 RGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYN 178

Query: 216 TAIHVLVVG----------------NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + I  L                    +L +A+R L++M   G+ P+V+TY+ LI  YC +
Sbjct: 179 SVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKI 238

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ-- 317
            R  +A  + D M  +G +PD  +Y T++     +  + ++ DL+  M+ D     D   
Sbjct: 239 GRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVF 298

Query: 318 ----------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                       +++A     +M Q G  P+VVTYT V++  C+ G ++ A     QM  
Sbjct: 299 NILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVS 358

Query: 368 HGCKPNTVSYTAFLNGLCHNG--KSLE--AREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            G  P+ +++T+ ++GLC  G  K +E  + EMIN        PNAI  + +M  L +EG
Sbjct: 359 EGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMIN----RGIHPNAIFLNTIMDSLCKEG 414

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           ++ EA D   +++  G  P  V   +LI   C +GKMD + K +   ++ G   + V ++
Sbjct: 415 RVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYS 474

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           +L+ G+C+ G +++AL+L  +M+     P+ +TY  I+  L   GRV  A E  MK++  
Sbjct: 475 ALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDS 534

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ---KCRTAYNQVIENLCSFGYLEE 600
           G+   + TY  V+   C+   V++ L++ + + SK+   + RT +N +I  L   G + +
Sbjct: 535 GIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRT-FNIMIVGLLKVGRIGD 593

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           A  +   +L +    DA    ++++S++ +G+   + ++   M       + +    +  
Sbjct: 594 AKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVR 653

Query: 661 RLILEGKSEEADTLMLRFVER 681
           +L+ +G    A T + +  E+
Sbjct: 654 KLLEKGDVRRAGTYLTKIDEK 674



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 225/464 (48%), Gaps = 16/464 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y ++++   K   C  A+ +   M RRG    P+A++Y  L+  Y+  G L +   
Sbjct: 224 DVVTYSLLIDYYCKIGRCTEARNIFDSMVRRG--QNPDAYTYRTLLHGYATKGALVDMHD 281

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L++M +  +     + N  I        L KA+     M+  G +PNV+TY  +I   C
Sbjct: 282 LLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILC 341

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              R++DA+    +M  +G SPD +++ +++  LC     K+V  L  +M+N        
Sbjct: 342 KAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAI 401

Query: 312 --NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             N   D    +GR+ EA +  +Q+  +G  PDVV+YT +++G+C  G++D++ K+L +M
Sbjct: 402 FLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRM 461

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G +P+ V+Y+A LNG C NG+  +A  +      +   PNAITY++++HGL   G++
Sbjct: 462 VSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRV 521

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             A +   ++V  G        N+++  LC    +D A +  Q   +K   + V  F  +
Sbjct: 522 VAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIM 581

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G  + G + +A SL   +      PD + Y  +I +  + G +EE+ EL + M   G 
Sbjct: 582 IVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGC 641

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVI 589
                T   ++ +  + G V      L K+  K+    A   V+
Sbjct: 642 TANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVL 685



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 220/480 (45%), Gaps = 16/480 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+L+ M+  G++     +S L+  Y + G+   A  +   M +    P+     T +H
Sbjct: 209 AVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLH 268

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  L      L  M   GI      +N LI+ Y     +  A+    EM  KG SP
Sbjct: 269 GYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSP 328

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQGRIEEAK---ELV 327
           + V+Y TV+  LCK  R+++      +MV++         ++L H    I E K   +L 
Sbjct: 329 NVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLS 388

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M   G  P+ +    +++  C+ G + +A     Q+ H G KP+ VSYT  ++G C +
Sbjct: 389 FEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLD 448

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           GK  E+ +++         P+ +TYS +++G  + G++ +A  + REM  K   P  +  
Sbjct: 449 GKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITY 508

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N+++  L   G++  A++F  + ++ G  + +  +  ++ G C+   ++EAL +   +  
Sbjct: 509 NIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRS 568

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
            +   +  T+  +I  L K GR+ +A  L   +L  GLVP  + Y  +I  + + G +E+
Sbjct: 569 KEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEE 628

Query: 568 LLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
             +L   M  K  C       N ++  L   G +  AG  L K+       +AST  +L+
Sbjct: 629 SDELFLSM-EKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLI 687



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 107/244 (43%), Gaps = 38/244 (15%)

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS------------LLDDMYLCKKDPDTV 515
           Q  +NK  A +   F  LIR FC  G L+ AL             + DD Y C   P+ +
Sbjct: 84  QVGVNK-LATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCP--PNVL 140

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV------------- 562
           +Y  +I+ L K G V++A  L  +ML +G  P +VTY +VI   C+              
Sbjct: 141 SYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQM 200

Query: 563 ---GRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
              G++E+ ++LL+KM     Q     Y+ +I+  C  G   EA  I   ++R     DA
Sbjct: 201 FDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDA 260

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI-LEGKSEEADTLML 676
            T   L+  Y  KG  +  + +   M  ++ IP   L   V   LI    K+E  D  M 
Sbjct: 261 YTYRTLLHGYATKGALVDMHDLLALMI-QDGIP---LEDHVFNILIRAYAKNETLDKAMT 316

Query: 677 RFVE 680
            F+E
Sbjct: 317 AFIE 320


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 141/522 (27%), Positives = 253/522 (48%), Gaps = 16/522 (3%)

Query: 176 PEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
           P     L+  Y ++G++++A  V+ MM+   +AP++  CN  +  L+  + +A   +  E
Sbjct: 47  PAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVRE 106

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            M  AGI+P+V TY+ LI+ YC +     A K++ EM  +GC  + V+Y  ++  LC+  
Sbjct: 107 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 166

Query: 296 RIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTY 342
            ++E     + M  D  L  D               R  EAK L+++MS     P+VV Y
Sbjct: 167 AVEEAFGFKKDM-EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVY 225

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             +++GF R G  D+A KM+++M   G +PN ++Y   + GLC  G+   A  ++     
Sbjct: 226 ANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVR 285

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
           +   P+ ITY++++ G  R     +A  ++ EM   G  P     +++I  LC+ G+ + 
Sbjct: 286 DSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEK 345

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A   ++E   KG   N   +  LI G+C++G++  A  + D M      PD   Y ++I 
Sbjct: 346 ASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIF 405

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QK 580
            LSK GRVEE+T+   +M  +GL+P   TY  +IH Y + G +E   +L+++ML    + 
Sbjct: 406 GLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKP 465

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               Y  ++E+      +E+       +L      D     +L+ +  + G    A++V 
Sbjct: 466 NDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL 525

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             +     +PD+ +   +   L      E+A  ++    ++G
Sbjct: 526 SEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 567



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/570 (25%), Positives = 266/570 (46%), Gaps = 21/570 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++  L K++    AK +L  M+   ++     ++ L+  + R G    A  ++
Sbjct: 186 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMI 245

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M  A V PN +  +  +  L    ++ +A   L++M      P+ +TYN +I+G+   
Sbjct: 246 KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRH 305

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH- 315
           H  KDA +L+ EM   G SP+  +Y  ++  LC+    ++  DL+E+M       N F  
Sbjct: 306 HNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 365

Query: 316 --------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +G +  A E+ ++M+++  +PD+  Y +++ G  +VG ++++ K   QM  
Sbjct: 366 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 425

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN  +Y+  ++G   NG    A +++    +    PN + Y  ++    +   + +
Sbjct: 426 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 485

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
                + M+ +G         +LI +L   G M+ A + + E    G   +V  ++SLI 
Sbjct: 486 VSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLIS 545

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C+  D E+A  +LD+M     DP+ V Y  +ID L K+G +  A  +   +L+KGLVP
Sbjct: 546 GLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP 605

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKIL 605
             VTY ++I   C+VG + +   L  +ML+      A  Y+ +     S G LE+A  ++
Sbjct: 606 NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLI 665

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            ++      A  S+ + LV+ +  +G      K+   +  R L+P+    + +   L   
Sbjct: 666 EEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEA 724

Query: 666 GKSEEADTLMLRFVERGHIQPKSEEHLQRQ 695
           GK  E  T+   FVE   +Q K+ E   R 
Sbjct: 725 GKLSEVHTI---FVE---LQQKTSESAARH 748



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/548 (27%), Positives = 252/548 (45%), Gaps = 27/548 (4%)

Query: 97  GELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKL 156
           G L NL   L    +  ++R+     V L   + A     +R  P V  ++++   K+  
Sbjct: 8   GSLFNLANGL----LIKMIRAYPSPPVVLASIHRALSDSGHR-SPAVLDVLVDTYKKSGR 62

Query: 157 CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
            Q A  V+ +M  RG+       + L+    RA  +     V   M  A ++P++   +T
Sbjct: 63  VQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYST 122

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            I       +   A + L  M+  G   N +TYN LI G C    +++A     +M   G
Sbjct: 123 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 182

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNL---FHDQGRIEEAK 324
             PD  +Y  ++  LCK +R  E + L+++M         V  +NL   F  +G  +EA 
Sbjct: 183 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 242

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +++ +M   G  P+ +TY  +V G C++G++D+A  +L+QM     +P+T++Y   + G 
Sbjct: 243 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 302

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             +    +A  +++  E    +PN  TYS+++HGL + G+  +A D++ EM  KG  P  
Sbjct: 303 FRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 362

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN----FTSLIRGFCQKGDLEEALS 500
                LI   CREG +  A     E  +K   VNV+     + SLI G  + G +EE+  
Sbjct: 363 FVYAPLISGYCREGNVSLA----CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 418

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
               M      P+  TY+ +I    KNG +E A +L+ +ML  GL P  V Y  ++  Y 
Sbjct: 419 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 478

Query: 561 QVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           +   +E +    + ML +        Y  +I NL S G +E A ++L ++ +  S  D  
Sbjct: 479 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVH 538

Query: 619 TCHVLVES 626
               L+  
Sbjct: 539 VYSSLISG 546



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 152/612 (24%), Positives = 273/612 (44%), Gaps = 68/612 (11%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +VY  +++   +      A ++++ M   G++     +  L+    + G++  A  +L  
Sbjct: 223 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 282

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M + +  P+ +  N  I      +    A R L  M+ AGI+PNV TY+ +I G C    
Sbjct: 283 MVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 342

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN----------DS 311
            + A  L++EM  KG  P+   Y  ++   C+E  +    ++ +KM            +S
Sbjct: 343 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNS 402

Query: 312 NLF--HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
            +F     GR+EE+ +   QM + G +P+  TY+ +++G+ + G+L+ A++++Q+M   G
Sbjct: 403 LIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 462

Query: 370 CKPNTVSYTAFLNG-------------------------------LCHN----GKSLEAR 394
            KPN V Y   L                                 L HN    G    A 
Sbjct: 463 LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAF 522

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            +++  E+    P+   YS ++ GL +     +A  ++ EM KKG  P  V  N LI  L
Sbjct: 523 RVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 582

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G +  A+      L KG   N V +TSLI G C+ GD+  A  L ++M      PD 
Sbjct: 583 CKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDA 642

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
             Y+ +    S  G +E+A  L+ +M  +G   ++ ++  ++  +C+ G++++ LKLL  
Sbjct: 643 FVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHV 701

Query: 575 MLSKQKCRTAYN--QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG- 631
           ++ +     A     +I  L   G L E   I  ++ +  S++ A     L    +N+G 
Sbjct: 702 IMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 761

Query: 632 IPLLAY----KVACRMFNRN---LIPDLKLCKK----------VSERLILEGKSEEADTL 674
           IPL       +  C+  N +   ++ D+ + K           + + L  +GK  EA  L
Sbjct: 762 IPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNL 821

Query: 675 MLRFVERGHIQP 686
           +    +RG++QP
Sbjct: 822 LKEMDKRGNLQP 833


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 143/573 (24%), Positives = 269/573 (46%), Gaps = 30/573 (5%)

Query: 95  LEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKT 154
           +E  L  L   L    +  V+R Q    +  +FF W  R+  +R   + + +++++L+K 
Sbjct: 51  MEDALEKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSFR-SWVTHNLVIDMLAKD 109

Query: 155 KLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
                  ++L  +    I+  P  FS L+ AY+++G    A+     M+     P++   
Sbjct: 110 DGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTY 169

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N+ +HV+V       AL    +M      PN  T+  L+ G C   +  DA+K+ DEM  
Sbjct: 170 NSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQ 229

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDS-------NLFHDQGRIEE 322
           KG  P+ + Y  ++  LC+ KR  +V  L+  M       DS       + F   G+I+E
Sbjct: 230 KGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDE 289

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A  L+    + G +  +  Y+++++G  R    D+ ++  ++M+  G +P+ V YT  + 
Sbjct: 290 AFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIR 349

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           G C  G    A  M+N   +   +P+   Y+ ++ G    G L +A  +  E+ K   FP
Sbjct: 350 GFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFP 409

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
           T     +LI  +CR G +D A++   +  N GC+ +++ F +LI G C+ G+LEEA  L 
Sbjct: 410 TSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLF 469

Query: 503 DDMYLCKKDP--------------DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
             M +  K+P              DT +  T+++ L ++G + +A +L+M++   G+VP 
Sbjct: 470 YKMEI-GKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPD 528

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILG 606
           ++TY  +I+ +C+   +    KL  ++  K        Y  +I+        E+A ++L 
Sbjct: 529 IMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLD 588

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
           ++++      ++    L+     KG   +A+ +
Sbjct: 589 QMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSL 621



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 213/453 (47%), Gaps = 38/453 (8%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N  I +L   +      + LE ++ + I     T++ LI  Y      + A++   +M  
Sbjct: 100 NLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKD 159

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
            GC PD  +Y +++  + +    KEV  L                   A  + NQM ++ 
Sbjct: 160 FGCKPDVFTYNSILHVMVQ----KEVFLL-------------------ALAVYNQMLKLN 196

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P+  T+  ++NG C+ G+ D A KM  +M   G  PNT+ YT  L+GLC   ++ +  
Sbjct: 197 YNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVH 256

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            ++NT +     P++IT + ++ G  + G++ EA  +++   K+G+       + LI  L
Sbjct: 257 RLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGL 316

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            R  + D  +++ ++    G   +VV +T LIRGFC+ G ++ AL++L+DM      PDT
Sbjct: 317 FRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDT 376

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
             Y  +I      G +++A  L +++      PT  TY  +I   C+ G +++  ++  +
Sbjct: 377 YCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQ 436

Query: 575 M--LSKQKCRTAYNQVIENLCSFGYLEEA---------GKILGKVLRTASKA----DAST 619
           M  L        +N +I+ LC  G LEEA         GK     LR +  A    D ++
Sbjct: 437 MENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTAS 496

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
              +VE     G+ L AYK+  ++ +  ++PD+
Sbjct: 497 LQTMVERLCESGLILKAYKLLMQLADSGVVPDI 529



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/504 (21%), Positives = 213/504 (42%), Gaps = 100/504 (19%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS--YLMVAYSRAGKLRNAMY 197
           + ++Y ++L  L + K      R+L  M   G  C P++ +   L+  + + G++  A  
Sbjct: 235 NTMIYTIILSGLCQAKRTDDVHRLLNTMKVSG--CCPDSITCNALLDGFCKLGQIDEAFA 292

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L + +K      +   ++ I  L    +  +   +  +M  AGI P+V+ Y  LI+G+C
Sbjct: 293 LLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFC 352

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD- 316
           ++  +  A+ ++++M  +G SPD   Y  ++   C    + + R L  + ++ ++ F   
Sbjct: 353 EVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLE-ISKNDCFPTS 411

Query: 317 ------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK----- 359
                        G ++EA+++ NQM  +GC P ++T+ A+++G C+ GEL++A+     
Sbjct: 412 CTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYK 471

Query: 360 -------------------------------------------KMLQQMYHHGCKPNTVS 376
                                                      K+L Q+   G  P+ ++
Sbjct: 472 MEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMT 531

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   +NG C       A ++    + +  +P+++TY  ++ G  R  +  +A  V+ +MV
Sbjct: 532 YNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMV 591

Query: 437 KKGFFPTPVEINLLIQSLCREGKM------------------DGAKKFMQECLNKG---- 474
           K G  P+      L+   CR+GK+                  D   K  +E   KG    
Sbjct: 592 KNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEK 651

Query: 475 ---CAVN---------VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
              C +          +  +T  + G CQ    EEAL +   +  C+ D +  +   +I+
Sbjct: 652 AVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLIN 711

Query: 523 ALSKNGRVEEATELMMKMLSKGLV 546
            L K+G +E A ++ +  L KG +
Sbjct: 712 GLCKDGNLEMAVDIFLYTLEKGFM 735



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 155/371 (41%), Gaps = 76/371 (20%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLS 200
            Y +++  + +  L   A+++   M   G  C P    F+ L+    +AG+L  A ++  
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQMENLG--CSPSIMTFNALIDGLCKAGELEEARHLFY 470

Query: 201 MMQKAAVAPNLLI--------------CNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
            M+     P+L +                T +  L     + KA + L ++  +G+ P++
Sbjct: 471 KMEIGK-NPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDI 529

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           +TYN LI G+C    I  A KL  E+ LKG SPD V+Y T++                  
Sbjct: 530 MTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLI------------------ 571

Query: 307 MVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL----------- 355
                + FH   R E+A  +++QM + GC P    Y  ++   CR G+L           
Sbjct: 572 -----DGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYL 626

Query: 356 -------DQAKKMLQQMYHHGCKPNTV----------------SYTAFLNGLCHNGKSLE 392
                  D+  K+ ++ +  G     V                 YT +L GLC   +S E
Sbjct: 627 RSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEE 686

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A ++    +E     N  +  ++++GL ++G L  A D+    ++KGF   P   N L++
Sbjct: 687 ALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLR 746

Query: 453 SLCREGKMDGA 463
           SL  + KM  A
Sbjct: 747 SLILQDKMKHA 757


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 235/467 (50%), Gaps = 25/467 (5%)

Query: 167  MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
            M   GI      +S L+  + R  +L  A+ VL  M K    PN++  ++ ++      +
Sbjct: 721  MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 780

Query: 227  LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
            +++A+  +++M + G  PN +T+N LI G    ++  +A+ LID M  KGC PD V+Y  
Sbjct: 781  ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 840

Query: 287  VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
            V+  LCK                       +G  + A  L+N+M Q    P V+ Y  ++
Sbjct: 841  VVNGLCK-----------------------RGDTDLAFNLLNKMEQGKLEPGVLIYNTII 877

Query: 347  NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
            +G C+   +D A  + ++M   G +PN V+Y++ ++ LC+ G+  +A  +++   E    
Sbjct: 878  DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 937

Query: 407  PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            P+  T+S ++    +EGKL EA  +  EMVK+   P+ V  + LI   C   ++D AK+ 
Sbjct: 938  PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 997

Query: 467  MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
             +  ++K C  +VV + +LI+GFC+   +EE + +  +M       +TVTY  +I  L +
Sbjct: 998  FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 1057

Query: 527  NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--A 584
             G  + A E+  +M+S G+ P ++TY T++   C+ G++E  + + E +   +   T   
Sbjct: 1058 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 1117

Query: 585  YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            YN +IE +C  G +E+   +   +     K D    + ++  +  KG
Sbjct: 1118 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 1164



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 254/510 (49%), Gaps = 21/510 (4%)

Query: 139  HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
            H+   Y +++    +      A  VL  M + G E      S L+  Y  + ++  A+ +
Sbjct: 728  HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 787

Query: 199  LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
            +  M      PN +  NT IH L + NK ++A+  ++RM   G  P+++TY  ++ G C 
Sbjct: 788  VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 847

Query: 259  LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VN 309
                  A  L+++M      P  + Y T++  LCK K + +  +L ++M         V 
Sbjct: 848  RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 907

Query: 310  DSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
             S+L     + GR  +A  L++ M +    PDV T++A+++ F + G+L +A+K+  +M 
Sbjct: 908  YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 967

Query: 367  HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                 P+ V+Y++ +NG C + +  EA++M      +   P+ +TY+ ++ G  +  ++ 
Sbjct: 968  KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 1027

Query: 427  EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
            E  +V REM ++G     V  N+LIQ L + G  D A++  +E ++ G   N++ + +L+
Sbjct: 1028 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 1087

Query: 487  RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
             G C+ G LE+A+ + + +   K +P   TY  +I+ + K G+VE+  +L   +  KG+ 
Sbjct: 1088 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 1147

Query: 547  PTVVTYRTVIHRYCQVGRVEDLLKLLEKM-----LSKQKCRTAYNQVIENLCSFGYLEEA 601
            P VV Y T+I  +C+ G  E+   L ++M     L    C   YN +I      G  E +
Sbjct: 1148 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC---YNTLIRARLRDGDREAS 1204

Query: 602  GKILGKVLRTASKADASTCHVLVESYLNKG 631
             +++ ++       DAST   LV + L+ G
Sbjct: 1205 AELIKEMRSCGFAGDASTIG-LVTNMLHDG 1233



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 241/512 (47%), Gaps = 26/512 (5%)

Query: 179  FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
            FS L+ A ++  K    + +   MQ   +  N    +  I+     ++L  AL  L +M 
Sbjct: 698  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 757

Query: 239  LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
              G  PN++T + L+ GYC   RI +A+ L+D+M + G  P+ V++ T++  L       
Sbjct: 758  KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL------- 810

Query: 299  EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                            H++    EA  L+++M   GC PD+VTY  VVNG C+ G+ D A
Sbjct: 811  --------------FLHNKA--SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854

Query: 359  KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
              +L +M     +P  + Y   ++GLC      +A  +    E +   PN +TYS ++  
Sbjct: 855  FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914

Query: 419  LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
            L   G+ S+A  ++ +M+++   P     + LI +  +EGK+  A+K   E + +    +
Sbjct: 915  LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974

Query: 479  VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            +V ++SLI GFC    L+EA  + + M      PD VTY T+I    K  RVEE  E+  
Sbjct: 975  IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 1034

Query: 539  KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFG 596
            +M  +GLV   VTY  +I    Q G  +   ++ ++M+S         YN +++ LC  G
Sbjct: 1035 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 1094

Query: 597  YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
             LE+A  +   + R+  +    T ++++E     G     + + C +  + + PD+    
Sbjct: 1095 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 1154

Query: 657  KVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
             +      +G  EEAD L     E G + P S
Sbjct: 1155 TMISGFCRKGSKEEADALFKEMKEDGTL-PNS 1185



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 224/441 (50%), Gaps = 22/441 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ A  +  K    + +   M+   +  +L   N  I+      +++ AL  L +M 
Sbjct: 191 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 250

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+ +T   L+ G+C  +R+ DA+ L+D+M   G  PD V+Y  ++  LCK KR+ 
Sbjct: 251 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 310

Query: 299 EVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           +  D  +++                N   +  R  +A  L++ M +    P+V+TY+A++
Sbjct: 311 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 370

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           + F + G++ +AK++ ++M      P+ V+Y++ +NGLC + +  EA +M +    +   
Sbjct: 371 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 430

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            + ++Y+ +++G  +  ++ +   + REM ++G     V  N LIQ   + G +D A++F
Sbjct: 431 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 490

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
             +    G + ++  +  L+ G C  G+LE+AL + +DM   + D D VTYTT+I  + K
Sbjct: 491 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 550

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----LSKQKCR 582
            G+VEEA  L   +  KGL P +VTY T++   C  G + ++  L  KM    L K  C 
Sbjct: 551 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 610

Query: 583 ------TAYNQVIENLCSFGY 597
                 T   ++I+ + S GY
Sbjct: 611 LSDGDITLSAELIKKMLSCGY 631



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 221/444 (49%), Gaps = 25/444 (5%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           KL +A+ + S M K+   P+++  N  +  +V   K    +   ++M++ GI  ++ T+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            +I  +C   ++  A+ ++ +M   G  PD+V+  +++   C+                 
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR----------------- 270

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                 + R+ +A  LV++M ++G  PD+V Y A+++  C+   ++ A    +++   G 
Sbjct: 271 ------RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 324

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +PN V+YTA +NGLC++ +  +A  +++   ++  TPN ITYS ++    + GK+ EA +
Sbjct: 325 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 384

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +  EMV+    P  V  + LI  LC   ++D A +     ++KGC  +VV++ +LI GFC
Sbjct: 385 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 444

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +   +E+ + L  +M       +TVTY T+I    + G V++A E   +M   G+ P + 
Sbjct: 445 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 504

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKV 608
           TY  ++   C  G +E  L + E M  ++       Y  VI  +C  G +EEA  +   +
Sbjct: 505 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 564

Query: 609 LRTASKADASTCHVLVESYLNKGI 632
                K D  T   ++     KG+
Sbjct: 565 SLKGLKPDIVTYTTMMSGLCTKGL 588



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 214/436 (49%), Gaps = 18/436 (4%)

Query: 137  YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
            Y+ + + +  ++  L        A  ++  M  +G  C+P+  +Y +V     + G    
Sbjct: 796  YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG--CQPDLVTYGVVVNGLCKRGDTDL 853

Query: 195  AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
            A  +L+ M++  + P +LI NT I  L     +  AL   + M+  GI PNV+TY+ LI 
Sbjct: 854  AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913

Query: 255  GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
              C+  R  DA +L+ +M  +  +PD  ++  ++    KE ++ E   L ++MV  S   
Sbjct: 914  CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 973

Query: 312  ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                     N F    R++EAK++   M    C PDVVTY  ++ GFC+   +++  ++ 
Sbjct: 974  SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 1033

Query: 363  QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            ++M   G   NTV+Y   + GL   G    A+E+      +   PN +TY+ ++ GL + 
Sbjct: 1034 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 1093

Query: 423  GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM-DGAKKFMQECLNKGCAVNVVN 481
            GKL +A  V   + +    PT    N++I+ +C+ GK+ DG   F    L KG   +VV 
Sbjct: 1094 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGVKPDVVA 1152

Query: 482  FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
            + ++I GFC+KG  EEA +L  +M      P++  Y T+I A  ++G  E + EL+ +M 
Sbjct: 1153 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 1212

Query: 542  SKGLVPTVVTYRTVIH 557
            S G      T   V +
Sbjct: 1213 SCGFAGDASTIGLVTN 1228



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 198/418 (47%), Gaps = 31/418 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +L  M + G E        L+  + R  ++ +A+ ++  M +    P+++  N  I 
Sbjct: 242 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 301

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    ++  A  F + ++  GI PNV+TY  L+ G C+  R  DA +L+ +M  K  +P
Sbjct: 302 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 361

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           + ++Y  ++                       + F   G++ EAKEL  +M +M   PD+
Sbjct: 362 NVITYSALL-----------------------DAFVKNGKVLEAKELFEEMVRMSIDPDI 398

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           VTY++++NG C    +D+A +M   M   GC  + VSY   +NG C   +  +  ++   
Sbjct: 399 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 458

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             +     N +TY+ ++ G  + G + +A +   +M   G  P     N+L+  LC  G+
Sbjct: 459 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 518

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           ++ A    ++   +   +++V +T++IRG C+ G +EEA SL   + L    PD VTYTT
Sbjct: 519 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 578

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           ++  L   G + E   L  KM  +GL+    T           G +    +L++KMLS
Sbjct: 579 MMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLS 628



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 226/441 (51%), Gaps = 17/441 (3%)

Query: 261  RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------- 311
            ++ DA+ L  EM      P  + +  ++  + K  +   V  L E+M N           
Sbjct: 675  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734

Query: 312  ---NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
               N F  + ++  A  ++ +M ++G  P++VT ++++NG+C    + +A  ++ QM+  
Sbjct: 735  ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794

Query: 369  GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
            G +PNTV++   ++GL  + K+ EA  +I+    +   P+ +TY VV++GL + G    A
Sbjct: 795  GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854

Query: 429  CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             +++ +M +    P  +  N +I  LC+   MD A    +E   KG   NVV ++SLI  
Sbjct: 855  FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914

Query: 489  FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
             C  G   +A  LL DM   K +PD  T++ +IDA  K G++ EA +L  +M+ + + P+
Sbjct: 915  LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974

Query: 549  VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKIL 605
            +VTY ++I+ +C   R+++  ++ E M+SK  C      YN +I+  C +  +EE  ++ 
Sbjct: 975  IVTYSSLINGFCMHDRLDEAKQMFEFMVSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVF 1033

Query: 606  GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
             ++ +     +  T ++L++     G   +A ++   M +  + P++     + + L   
Sbjct: 1034 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 1093

Query: 666  GKSEEADTLMLRFVERGHIQP 686
            GK E+A  ++  +++R  ++P
Sbjct: 1094 GKLEKA-MVVFEYLQRSKMEP 1113



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 150/574 (26%), Positives = 260/574 (45%), Gaps = 53/574 (9%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y+ D + Y  +++ L KTK    A    + + R+GI  RP   +Y  L+     + +  +
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI--RPNVVTYTALVNGLCNSSRWSD 346

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +LS M K  + PN++  +  +   V   K+ +A    E M    I P+++TY+ LI 
Sbjct: 347 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 406

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G C   RI +A ++ D M  KGC  D VSY T++   CK K                   
Sbjct: 407 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK------------------- 447

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
               R+E+  +L  +MSQ G + + VTY  ++ GF + G++D+A++   QM   G  P+ 
Sbjct: 448 ----RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 503

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +Y   L GLC NG+  +A  +    ++     + +TY+ V+ G+ + GK+ EA  +   
Sbjct: 504 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 563

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAK----KFMQECLNKG-CAVNVVNFT---SLI 486
           +  KG  P  V    ++  LC +G +   +    K  QE L K  C ++  + T    LI
Sbjct: 564 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELI 623

Query: 487 RGFCQKGDLEEALSLLDDMY--LCKKDPDTV------TYTTIIDALSKNG----RVEEAT 534
           +     G    A SLL D+   +CKK    +      T     + LS+NG    ++++A 
Sbjct: 624 KKMLSCG---YAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAV 680

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENL 592
            L  +M+     P+++ +  ++    ++ + + ++ L E+M  L        Y+ +I   
Sbjct: 681 ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCF 740

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C    L  A  +LGK+++   + +  T   L+  Y +      A  +  +MF     P+ 
Sbjct: 741 CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 800

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
                +   L L  K+ EA  L+ R V +G  QP
Sbjct: 801 VTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQP 833



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 161/336 (47%), Gaps = 13/336 (3%)

Query: 138  RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
            R + + Y  ++  L        A R+L  M  R I      FS L+ A+ + GKL  A  
Sbjct: 902  RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 961

Query: 198  VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            +   M K ++ P+++  ++ I+   + ++L +A +  E M      P+V+TYN LIKG+C
Sbjct: 962  LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 1021

Query: 258  DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
               R+++ +++  EM  +G   + V+Y  ++  L +       +++ ++MV+D       
Sbjct: 1022 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 1081

Query: 312  --NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
              N   D     G++E+A  +   + +    P + TY  ++ G C+ G+++    +   +
Sbjct: 1082 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 1141

Query: 366  YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
               G KP+ V+Y   ++G C  G   EA  +    +E+   PN+  Y+ ++    R+G  
Sbjct: 1142 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 1201

Query: 426  SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
              + ++++EM   GF      I  L+ ++  +G++D
Sbjct: 1202 EASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLD 1236



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 124/264 (46%), Gaps = 2/264 (0%)

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           R+ KL++A D+  +MVK   FP+ V+ N L+ ++ +  K D      ++    G   ++ 
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            F  +I  FC    +  ALS+L  M     +PD VT  ++++   +  RV +A  L+ KM
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYL 598
           +  G  P +V Y  +I   C+  RV D     +++  K  +     Y  ++  LC+    
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
            +A ++L  +++     +  T   L+++++  G  L A ++   M   ++ PD+     +
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404

Query: 659 SERLILEGKSEEADTLMLRFVERG 682
              L L  + +EA+ +    V +G
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKG 428


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 177/717 (24%), Positives = 309/717 (43%), Gaps = 126/717 (17%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA---DERVALQFFYWADR 133
           +V E+ R+I  R  W+       + L  S+    +  + R+     D   AL FF W  R
Sbjct: 24  IVAELGRVISTRR-WNKGRA--YKRLAPSVTAAHVADLFRAPVAPLDPATALAFFEWVAR 80

Query: 134 QWRYRHDPIVYYMMLEILSKTKL---------------------------CQGAKRV--- 163
           +  +RH    +  +L++L++ +                             Q  +RV   
Sbjct: 81  RPGFRHTAASHAALLQLLARRRAPANYDKLVVSMVSCSDTAEDMREAVDAIQAIRRVGGD 140

Query: 164 LR-----LMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
           LR     LM    + CR   +SY  L+        +R A+ +L MM +   + NL     
Sbjct: 141 LRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTL 200

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            I  L    ++  A R LE M L G+ P+V TYN +I GYC   R+KDA+ +   M   G
Sbjct: 201 LIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNG 260

Query: 277 CSPDKVSYYTVMGYLCKEK----------------------------------RIKEVRD 302
           C+PD  +Y  ++  LC EK                                  RI +   
Sbjct: 261 CNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALR 320

Query: 303 LMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           +   M++ +            N+   + R +EAKE V++M   G  P+VV YT++++G+C
Sbjct: 321 VKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYC 380

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +VG++  A ++ + M H GC+PN  +Y++ + GL  + K  +A  +I   +E+  TP  I
Sbjct: 381 KVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVI 440

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM--- 467
           TY+ ++ G  ++ +   A  +   M + G  P     N+L  +LC+ G+ + A  F+   
Sbjct: 441 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRK 500

Query: 468 -----------------------------QECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
                                        ++ +N+GC  +   ++ L++  C++  L EA
Sbjct: 501 GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEA 560

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           LS+LD M L     + V YT II  + K G+ + A  +  +M+S G  P+  TY   I  
Sbjct: 561 LSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISS 620

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           YC++G++E+   L+ +M           YN  I      GY++ A   L +++  + + +
Sbjct: 621 YCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPN 680

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             T  +L++ +L   +    Y     M+N     +L    ++ ER++  G +  A T
Sbjct: 681 YWTYWILLKHFLKMSLVDAHYVDTSGMWNW---IELDTVWQLLERMVKHGLNPTAVT 734



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 139/570 (24%), Positives = 254/570 (44%), Gaps = 44/570 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++ +L K    + AK  +  M   G+      ++ ++  Y + GK+  A+ V 
Sbjct: 333 DLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVF 392

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M+     PN    ++ I+ L+   KL KA+  + +MQ  GITP V+TY  LI+G C  
Sbjct: 393 RLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKK 452

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           H   +A +L + M   G +PD+ +Y  +   LCK                        GR
Sbjct: 453 HEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCK-----------------------SGR 489

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            EEA      + + G +   VTYT++V+GF + G  D A  ++++M + GCK ++ +Y+ 
Sbjct: 490 AEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSV 546

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L  LC   K  EA  +++         N + Y++++  + +EGK   A  +  EM+  G
Sbjct: 547 LLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSG 606

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P+     + I S C+ G+++ A+  + E    G A +VV +   I G    G ++ A 
Sbjct: 607 HKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAF 666

Query: 500 SLLDDMYLCKKDPDTVTY---------TTIIDA--LSKNG-----RVEEATELMMKMLSK 543
           S L  M     +P+  TY          +++DA  +  +G      ++   +L+ +M+  
Sbjct: 667 STLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKH 726

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEA 601
           GL PT VTY ++I  +C+  R+E+   L + M  K        Y  +I+  C      +A
Sbjct: 727 GLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKA 786

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
              +  ++    +    + H L+    ++G    A  + C +         ++  K+   
Sbjct: 787 VSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILND 846

Query: 662 LILEGKSEEADTLMLRFVERGHIQPKSEEH 691
            +L+    +  + +L  +E  H Q  SE +
Sbjct: 847 GLLKAGHVDFCSQLLSAMENRHCQIDSETY 876



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 174/363 (47%), Gaps = 5/363 (1%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G + +A  L+  M  MGC  +  +YT ++ G C    + +A  +L  M   GC  N  +Y
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T  + GLC  G+   AR ++         P+  TY+ ++ G  + G++ +A  +   M +
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G  P     N+LI  LC E K D A++ + + + +G    V+ FT++I G+C+   +++
Sbjct: 259 NGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           AL +   M       D   Y  +I+ L K  R +EA E + +M + GL P VV Y ++I 
Sbjct: 318 ALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIID 377

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
            YC+VG+V   L++  +++  + CR     Y+ +I  L     L +A  ++ K+      
Sbjct: 378 GYCKVGKVGAALEVF-RLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGIT 436

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
               T   L++    K     A+++   M    L PD +    ++  L   G++EEA + 
Sbjct: 437 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF 496

Query: 675 MLR 677
           ++R
Sbjct: 497 LVR 499


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/594 (26%), Positives = 274/594 (46%), Gaps = 34/594 (5%)

Query: 122 RVALQFFYWADRQWRYRHD-PIVYYMMLEILSKTKLCQGAKRVLRLMAR----------- 169
           ++ L FFYW+  Q       P  +  +   L    L   A  +L  M R           
Sbjct: 102 KLLLDFFYWSSPQLAPSAPAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLAS 161

Query: 170 --RGIECR----PEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
             R +       P     L+  Y ++G++++A  V+ MM+   +AP++  CN  +  L+ 
Sbjct: 162 IHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLR 221

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
            + +A   +  E M  AGI+P+V TY+ LI+ YC +     A K++ EM  +GC  + V+
Sbjct: 222 ADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVT 281

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQM 330
           Y  ++  LC+   ++E     + M  D  L  D               R  EAK L+++M
Sbjct: 282 YNVLIAGLCRSGAVEEAFGFKKDM-EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM 340

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
           S     P+VV Y  +++GF R G  D+A KM+++M   G +PN ++Y   + GLC  G+ 
Sbjct: 341 SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQM 400

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             A  ++     +   P+ ITY++++ G  R     +A  ++ EM   G  P     +++
Sbjct: 401 DRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIM 460

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I  LC+ G+ + A   ++E   KG   N   +  LI G+C++G++  A  + D M     
Sbjct: 461 IHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 520

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            PD   Y ++I  LSK GRVEE+T+   +M  +GL+P   TY  +IH Y + G +E   +
Sbjct: 521 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 580

Query: 571 LLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           L+++ML    +     Y  ++E+      +E+       +L      D     +L+ +  
Sbjct: 581 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLS 640

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           + G    A++V   +     +PD+ +   +   L      E+A  ++    ++G
Sbjct: 641 SSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 694



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/570 (25%), Positives = 265/570 (46%), Gaps = 21/570 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++  L K++    AK +L  M+   ++     ++ L+  + R G    A  ++
Sbjct: 313 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMI 372

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M  A V PN +  +  +  L    ++ +A   L++M      P+ +TYN +I+G+   
Sbjct: 373 KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRH 432

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH- 315
           H  KDA +L+ EM   G SP+  +Y  ++  LC+    ++  DL+E+M       N F  
Sbjct: 433 HSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 492

Query: 316 --------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +G +  A E+ ++M+++  +PD+  Y +++ G  +VG ++++ K   QM  
Sbjct: 493 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 552

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN  +Y+  ++G   NG    A +++    +    PN + Y  ++    +   + +
Sbjct: 553 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 612

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
                + M+ +G         +LI +L   G M+ A + +      G   +V  ++SLI 
Sbjct: 613 VSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLIS 672

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C+  D E+A  +LD+M     DP+ V Y  +ID L K+G +  A  +   +L+KGLVP
Sbjct: 673 GLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP 732

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKIL 605
             VTY ++I   C+VG + +   L  +ML+      A  Y+ +     S G LE+A  ++
Sbjct: 733 NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLI 792

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            ++      A  S+ + LV+ +  +G      K+   +  R L+P+    + +   L   
Sbjct: 793 EEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEA 851

Query: 666 GKSEEADTLMLRFVERGHIQPKSEEHLQRQ 695
           GK  E  T+   FVE   +Q K+ E   R 
Sbjct: 852 GKLSEVHTI---FVE---LQQKTSESAARH 875



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 251/547 (45%), Gaps = 27/547 (4%)

Query: 97  GELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKL 156
           G L NL   L    +  ++R+     V L   + A     +R  P V  ++++   K+  
Sbjct: 135 GSLFNLANGL----LIKMIRAYPSPPVVLASIHRALSDSGHR-SPAVLDVLVDTYKKSGR 189

Query: 157 CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
            Q A  V+ +M  RG+       + L+    RA  +     V   M  A ++P++   +T
Sbjct: 190 VQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYST 249

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            I       +   A + L  M+  G   N +TYN LI G C    +++A     +M   G
Sbjct: 250 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 309

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNL---FHDQGRIEEAK 324
             PD  +Y  ++  LCK +R  E + L+++M         V  +NL   F  +G  +EA 
Sbjct: 310 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 369

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +++ +M   G  P+ +TY  +V G C++G++D+A  +L+QM     +P+T++Y   + G 
Sbjct: 370 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 429

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             +    +A  +++  E    +PN  TYS+++HGL + G+  +A D++ EM  KG  P  
Sbjct: 430 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 489

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN----FTSLIRGFCQKGDLEEALS 500
                LI   CREG +  A     E  +K   VNV+     + SLI G  + G +EE+  
Sbjct: 490 FVYAPLISGYCREGNVSLA----CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
               M      P+  TY+ +I    KNG +E A +L+ +ML  GL P  V Y  ++  Y 
Sbjct: 546 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 605

Query: 561 QVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           +   +E +    + ML +        Y  +I NL S G +E A ++L  + +  S  D  
Sbjct: 606 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 665

Query: 619 TCHVLVE 625
               L+ 
Sbjct: 666 VYSSLIS 672



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 251/524 (47%), Gaps = 39/524 (7%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
            Y +M+  L ++   + A  +L  M  +G+  +P AF Y  L+  Y R G +  A  +  
Sbjct: 456 TYSIMIHGLCQSGEPEKASDLLEEMTTKGL--KPNAFVYAPLISGYCREGNVSLACEIFD 513

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M K  V P+L   N+ I  L    ++ ++ ++  +MQ  G+ PN  TY+ LI GY    
Sbjct: 514 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 573

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ--- 317
            ++ A +L+  M   G  P+ V Y  ++    K   I++V    + M++   +  ++   
Sbjct: 574 DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYG 633

Query: 318 ---------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                    G +E A  +++ + + G +PDV  Y+++++G C+  + ++A  +L +M   
Sbjct: 634 ILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK 693

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G  PN V Y A ++GLC +G    AR + N+   +   PN +TY+ ++ G  + G +S A
Sbjct: 694 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 753

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             +  EM+  G  P     ++L       G ++ A   ++E   +G A ++ +F +L+ G
Sbjct: 754 FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDG 812

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA--------------- 533
           FC++G ++E L LL  +      P+ +T   II  LS+ G++ E                
Sbjct: 813 FCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESA 872

Query: 534 ----TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQ 587
               + L M M+++G +P  V    +I  +C+ G ++  L L + +++K      ++Y  
Sbjct: 873 ARHFSSLFMDMINQGKIPLDVV-DDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLA 931

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +++NLC  G L EA  +L ++ +       + C +L+ +    G
Sbjct: 932 IVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSG 975



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/568 (24%), Positives = 248/568 (43%), Gaps = 16/568 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++E   K +    AK+VL  M  RG       ++ L+    R+G +  A    
Sbjct: 243 DVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFK 302

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+   + P+       I+ L    +  +A   L+ M  A + PNV+ Y  LI G+   
Sbjct: 303 KDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMRE 362

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
               +A K+I EM   G  P+K++Y  ++  LCK  ++     L+++MV DS        
Sbjct: 363 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 422

Query: 312 NL-----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
           NL     F    + ++A  L+++M   G  P+V TY+ +++G C+ GE ++A  +L++M 
Sbjct: 423 NLIIEGHFRHHSK-KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 481

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G KPN   Y   ++G C  G    A E+ +   +    P+   Y+ ++ GL + G++ 
Sbjct: 482 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 541

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           E+     +M ++G  P     + LI    + G ++ A++ +Q  L+ G   N V +  L+
Sbjct: 542 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLL 601

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
             + +  D+E+  S    M       D   Y  +I  LS +G +E A  ++  +   G V
Sbjct: 602 ESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSV 661

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKI 604
           P V  Y ++I   C+    E    +L++M  K        YN +I+ LC  G +  A  +
Sbjct: 662 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 721

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
              +L      +  T   L++     G    A+ +   M    + PD  +   ++     
Sbjct: 722 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSS 781

Query: 665 EGKSEEADTLMLRFVERGHIQPKSEEHL 692
            G  E+A  L+     RGH    S  +L
Sbjct: 782 AGDLEQAMFLIEEMFLRGHASISSFNNL 809


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 236/467 (50%), Gaps = 25/467 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI      +S L+  + R  +L  A+ VL  M K    PN++  ++ ++      +
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++A+  +++M + G  PN +T+N LI G    ++  +A+ LID M  KGC PD V+Y  
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           V+  LCK        +L+ KM        +QG++E               P V+ Y  ++
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKM--------EQGKLE---------------PGVLIYNTII 263

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C+   +D A  + ++M   G +PN V+Y++ ++ LC+ G+  +A  +++   E    
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+  T+S ++    +EGKL EA  +  EMVK+   P+ V  + LI   C   ++D AK+ 
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +  ++K C  +VV + +LI+GFC+   +EE + +  +M       +TVTY  +I  L +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--A 584
            G  + A E+  +M+S G+ P ++TY T++   C+ G++E  + + E +   +   T   
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           YN +IE +C  G +E+   +   +     K D    + ++  +  KG
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 254/510 (49%), Gaps = 21/510 (4%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           H+   Y +++    +      A  VL  M + G E      S L+  Y  + ++  A+ +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +  M      PN +  NT IH L + NK ++A+  ++RM   G  P+++TY  ++ G C 
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VN 309
                 A  L+++M      P  + Y T++  LCK K + +  +L ++M         V 
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293

Query: 310 DSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            S+L     + GR  +A  L++ M +    PDV T++A+++ F + G+L +A+K+  +M 
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                P+ V+Y++ +NG C + +  EA++M      +   P+ +TY+ ++ G  +  ++ 
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           E  +V REM ++G     V  N+LIQ L + G  D A++  +E ++ G   N++ + +L+
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C+ G LE+A+ + + +   K +P   TY  +I+ + K G+VE+  +L   +  KG+ 
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM-----LSKQKCRTAYNQVIENLCSFGYLEEA 601
           P VV Y T+I  +C+ G  E+   L ++M     L    C   YN +I      G  E +
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC---YNTLIRARLRDGDREAS 590

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKG 631
            +++ ++       DAST   LV + L+ G
Sbjct: 591 AELIKEMRSCGFAGDASTIG-LVTNMLHDG 619



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 244/512 (47%), Gaps = 15/512 (2%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           KL +A+ +   M K+   P+++  +  +  +   NK    +   E+MQ  GI  N  TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--- 307
            LI  +C   ++  A+ ++ +M   G  P+ V+  +++   C  KRI E   L+++M   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 308 ------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                 V  + L H      +  EA  L+++M   GC PD+VTY  VVNG C+ G+ D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L +M     +P  + Y   ++GLC      +A  +    E +   PN +TYS ++  
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L   G+ S+A  ++ +M+++   P     + LI +  +EGK+  A+K   E + +    +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +V ++SLI GFC    L+EA  + + M      PD VTY T+I    K  RVEE  E+  
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFG 596
           +M  +GLV   VTY  +I    Q G  +   ++ ++M+S         YN +++ LC  G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            LE+A  +   + R+  +    T ++++E     G     + + C +  + + PD+    
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
            +      +G  EEAD L     E G + P S
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTL-PNS 571



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 214/436 (49%), Gaps = 18/436 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           Y+ + + +  ++  L        A  ++  M  +G  C+P+  +Y +V     + G    
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG--CQPDLVTYGVVVNGLCKRGDTDL 239

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +L+ M++  + P +LI NT I  L     +  AL   + M+  GI PNV+TY+ LI 
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
             C+  R  DA +L+ +M  +  +PD  ++  ++    KE ++ E   L ++MV  S   
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                    N F    R++EAK++   M    C PDVVTY  ++ GFC+   +++  ++ 
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           ++M   G   NTV+Y   + GL   G    A+E+      +   PN +TY+ ++ GL + 
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM-DGAKKFMQECLNKGCAVNVVN 481
           GKL +A  V   + +    PT    N++I+ +C+ GK+ DG   F    L KG   +VV 
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGVKPDVVA 538

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           + ++I GFC+KG  EEA +L  +M      P++  Y T+I A  ++G  E + EL+ +M 
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598

Query: 542 SKGLVPTVVTYRTVIH 557
           S G      T   V +
Sbjct: 599 SCGFAGDASTIGLVTN 614



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 161/336 (47%), Gaps = 13/336 (3%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + + Y  ++  L        A R+L  M  R I      FS L+ A+ + GKL  A  
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M K ++ P+++  ++ I+   + ++L +A +  E M      P+V+TYN LIKG+C
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              R+++ +++  EM  +G   + V+Y  ++  L +       +++ ++MV+D       
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467

Query: 312 --NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             N   D     G++E+A  +   + +    P + TY  ++ G C+ G+++    +   +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G KP+ V+Y   ++G C  G   EA  +    +E+   PN+  Y+ ++    R+G  
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
             + ++++EM   GF      I  L+ ++  +G++D
Sbjct: 588 EASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLD 622



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 131/302 (43%), Gaps = 38/302 (12%)

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           E KL +A  +  EMVK   FP+ +E + L+ ++ +  K D      ++  N G   N   
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           ++ LI  FC++  L  AL++L  M     +P+ VT +++++    + R+ EA  L+ +M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--------------QKCRTA--- 584
             G  P  VT+ T+IH      +  + + L+++M++K                C+     
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 585 --------------------YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
                               YN +I+ LC + ++++A  +  ++     + +  T   L+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
               N G    A ++   M  R + PD+     + +  + EGK  EA+ L    V+R  I
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS-I 357

Query: 685 QP 686
            P
Sbjct: 358 DP 359


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/574 (27%), Positives = 266/574 (46%), Gaps = 18/574 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D   Y ++L+ L   +    A  +LR+MA  G  C P A +Y  V   + + G +  A  
Sbjct: 178 DVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACD 237

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           + + M +  ++P+L   N  ++ L     + KA   L +M   G+ P+  TYN LI GY 
Sbjct: 238 LFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYS 297

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              + K+A+++  +M  +G  PD V+  ++M  LCK  +IK+ RD+ + M          
Sbjct: 298 STGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIF 357

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 N +  +G + +  EL N M   G  PD   +  ++  + + G LD+A  +  +M
Sbjct: 358 SYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEM 417

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G +P+ V+Y+  +  LC  GK  +A E  N   ++   P+  TY  ++ G    G L
Sbjct: 418 REQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDL 477

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A D+V +M+ KG  P     N +I +LC+ G++  A+      ++ G   NV+ + +L
Sbjct: 478 LKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTL 537

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           + G+C  G +E AL + D M      P+ V Y T+++   K GR++E   L  ++L KG+
Sbjct: 538 MDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGI 597

Query: 546 VPTVVTYRTVIHRYCQVGR-VEDLLKLLEKMLSKQKC-RTAYNQVIENLCSFGYLEEAGK 603
            P+   Y  ++H   Q GR V   +K  E   S     R  Y+ V+  L      +EA  
Sbjct: 598 KPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAIL 657

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           +  ++     K D +T ++++           A  +   +    L+P +     +   LI
Sbjct: 658 LFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLI 717

Query: 664 LEGKSEEADTLMLRFVERGHIQPKSE--EHLQRQ 695
            EG  EEAD +       G  QP S+   H+ R+
Sbjct: 718 KEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRE 751



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 217/467 (46%), Gaps = 31/467 (6%)

Query: 172 IECRPEAFSYLMVAYSRAG--KLRNAMYVLSMMQK--AAVAPNLLICNTAIHVLVVGNKL 227
           + C P+ FSY +V  S     K   A  +L MM +  A   PN +  NT I        +
Sbjct: 173 LGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDV 232

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
            KA      M   GI+P++ TYNC++   C    +  A  ++ +M  KG  PD  +Y ++
Sbjct: 233 NKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSL 292

Query: 288 M-GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           + GY                           G+ +EA  +  +M+  G +PDVVT  +++
Sbjct: 293 IYGY------------------------SSTGQWKEAVRVSKKMTSQGILPDVVTLNSLM 328

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
              C+ G++  A+ +   M   G K +  SY   LNG    G  ++  E+ N    +   
Sbjct: 329 ASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIA 388

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P++  ++V++    + G L  A  +  EM ++G  P  V  + +I +LCR GKMD A + 
Sbjct: 389 PDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEK 448

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
             + +++G A ++  +  LI+GFC  GDL +A  L+  M      PD   +  II+ L K
Sbjct: 449 FNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCK 508

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTA 584
            GRV +A  +    +S GL P V+ Y T++  YC VG++E+ L++ + M+S   Q     
Sbjct: 509 LGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVV 568

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           Y  ++   C  G ++E   +  ++L    K   +  ++++      G
Sbjct: 569 YGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAG 615



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 221/464 (47%), Gaps = 20/464 (4%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           ++P + TY  L+      HR K  +    ++   G   D +    ++  LC+ KR  E  
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163

Query: 302 D-LMEKM-----VND--------SNLFHDQGRIEEAKELVNQMSQMG--CIPDVVTYTAV 345
           D L+ +M     V D         +L  D+ +  +A EL+  M++ G  C+P+ V Y  V
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDR-KSGQADELLRMMAEGGAVCLPNAVAYNTV 222

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++GF + G++++A  +  +M   G  P+  +Y   +N LC      +A  ++    ++  
Sbjct: 223 IDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGV 282

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+  TY+ +++G    G+  EA  V ++M  +G  P  V +N L+ SLC+ GK+  A+ 
Sbjct: 283 LPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARD 342

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
                  KG   ++ ++  ++ G+  KG L +   L + M      PD+  +  +I A +
Sbjct: 343 VFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYA 402

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
           K G ++ AT +  +M  +G+ P VVTY TVI   C++G+++D ++   +M+ +      +
Sbjct: 403 KCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSIS 462

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            Y+ +I+  C+ G L +A  ++ +++    + D    + ++ +    G  + A  +    
Sbjct: 463 TYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFT 522

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
            +  L P++ +   + +   L GK E A  +    V  G IQP 
Sbjct: 523 ISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAG-IQPN 565



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 15/251 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D   +  ++  L K      A+ +       G+      ++ LM  Y   GK+ NA+ 
Sbjct: 493 RPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALR 552

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V  +M  A + PN+++  T ++      ++ + L     +   GI P+   YN ++ G  
Sbjct: 553 VFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLF 612

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL----CKEKRI---KEVR------DLM 304
              R   A     EM   G + D+ +Y  V+G L    C ++ I   KE+       D+ 
Sbjct: 613 QAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDIT 672

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
              +  + +F  + R+EEAK+L   +S+ G +P VVTY+ ++    + G +++A  M   
Sbjct: 673 TLNIMIAGMFQIR-RVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSS 731

Query: 365 MYHHGC-KPNT 374
           M + GC +PN+
Sbjct: 732 MENAGCEQPNS 742


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 162/546 (29%), Positives = 262/546 (47%), Gaps = 54/546 (9%)

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           L+K KL +  KR+L +M   G    P  F+ L+ AY R+G    A  +L  M +    P 
Sbjct: 88  LNKEKLGR-CKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPG 146

Query: 211 LLICNTAIHVLVVGNKLAK-----ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            ++ N  I  +    +  K     A +    M  AG+  N +  +   +  C + + + A
Sbjct: 147 YVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKA 206

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NL 313
             +I EM  KG  PD  +Y  V+GYLC   ++++   L ++M  +             + 
Sbjct: 207 YNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDS 266

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           F   G IE+A+   ++M + GC P+VVTYTA+++ + +  ++ +A ++ + M   GC PN
Sbjct: 267 FCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPN 326

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEE-----------------WWTPNAITYSVVM 416
            V+YTA ++GLC  GK  +A ++    ++E                    PN  TY  ++
Sbjct: 327 IVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALV 386

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            GL +  ++ EA D+++ M  +G  P  V  + LI   C+ GK+D A++     L  G  
Sbjct: 387 DGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYD 446

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            NV  ++SLI    +   L+ AL +L  M      P+ V YT +ID L K G+ +EA +L
Sbjct: 447 PNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 506

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCS 594
           M+ M  KG  P VVTY  +I  + + GRVE  L+LL++M SK        Y  +I + CS
Sbjct: 507 MVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCS 566

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            G L+EA K+L ++ +T               Y  + +    Y+     FNR  I  L L
Sbjct: 567 TGLLDEAHKLLEEMKQT---------------YWPRHVA--GYRKVIEGFNREFIASLYL 609

Query: 655 CKKVSE 660
             ++SE
Sbjct: 610 SFEISE 615



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 249/519 (47%), Gaps = 10/519 (1%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  V+R M  +G       +S ++     A K+  A  +   M++  +AP++ +  T I 
Sbjct: 206 AYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLID 265

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A  + + M+  G  PNV+TY  LI  Y    ++  A ++ + M  KGC+P
Sbjct: 266 SFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTP 325

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           + V+Y  ++  LCK  +I++   + + M  ++    D   ++    +V+  S     P+V
Sbjct: 326 NIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPD---VDMHFRVVDGASNE---PNV 379

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            TY A+V+G C+  ++ +A+ +L+ M   GC+PN V Y A ++G C  GK  EA+E+  T
Sbjct: 380 FTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTT 439

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             E  + PN  TYS ++  L ++ +L  A  V+ +M++    P  V    +I  LC+ GK
Sbjct: 440 MLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 499

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
            D A K M     KGC  NVV +T++I GF + G +E+ L LL  M      P+ VTY  
Sbjct: 500 TDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRV 559

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +I+     G ++EA +L+ +M        V  YR VI  + +       L          
Sbjct: 560 LINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSV 619

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV---LVESYLNKGIPLLA 636
                Y  +I+N    G LE A + L + L + S   A+  ++   L+E+         A
Sbjct: 620 PVAPVYRVLIDNFIKAGRLEIALE-LNEELSSFSPFSAANQNIHITLIENLSLAHKADKA 678

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           +++   M +R  IP+L +   + + L+   + EEA  L+
Sbjct: 679 FELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLL 717



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 237/531 (44%), Gaps = 78/531 (14%)

Query: 175 RPEAFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           R + F+    A+S  ++GK R A   LS+++K    P+ ++    I  L   +   +A+ 
Sbjct: 7   RMDEFTLGCFAHSLCKSGKWREA---LSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMD 63

Query: 233 FLERMQLAGITPNVLTY-----------------------------------NCLIKGYC 257
           FL RM+ +   PNVLTY                                   N L+  YC
Sbjct: 64  FLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYC 123

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC-KEKRIKEVRDLMEKM--------- 307
                  A KL+ +M   GC P  V Y  ++G +C  E+  K+V DL EK          
Sbjct: 124 RSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGV 183

Query: 308 ----VNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
               VN SN        G+ E+A  ++ +M   G IPD  TY+ V+   C   ++++A +
Sbjct: 184 VLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQ 243

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           + Q+M  +G  P+   YT  ++  C  G   +AR   +  E +   PN +TY+ ++H   
Sbjct: 244 LFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYL 303

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV--- 477
           +  K+S+A +V   M+ KG  P  V    LI  LC+ GK++ A +  +    +   +   
Sbjct: 304 KSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDV 363

Query: 478 --------------NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
                         NV  + +L+ G C+   ++EA  LL  M +   +P+ V Y  +ID 
Sbjct: 364 DMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDG 423

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR- 582
             K G+++EA E+   ML  G  P V TY ++I R  +  R++  LK+L KML +  C  
Sbjct: 424 CCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKML-ENSCAP 482

Query: 583 --TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
               Y ++I+ LC  G  +EA K++  +       +  T   +++ +   G
Sbjct: 483 NVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSG 533



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/502 (26%), Positives = 234/502 (46%), Gaps = 68/502 (13%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++  L      + A ++ + M R GI      ++ L+ ++ +AG +  A    
Sbjct: 221 DTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWF 280

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++   APN++     IH  +   K++KA    E M   G TPN++TY  LI G C  
Sbjct: 281 DEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKA 340

Query: 260 HRIKDAIKLID-------EMP--------LKGCS--PDKVSYYTVMGYLCKEKRIKEVRD 302
            +I+ A ++         E+P        + G S  P+  +Y  ++  LCK  ++KE RD
Sbjct: 341 GKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARD 400

Query: 303 LMEKM----VNDSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           L++ M       +++ +D         G+++EA+E+   M + G  P+V TY+++++   
Sbjct: 401 LLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLF 460

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +   LD A K+L +M  + C PN V YT  ++GLC  GK+ EA +++   EE+   PN +
Sbjct: 461 KDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVV 520

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY+ ++ G  + G++ +  +++++M  KG  P  V   +LI   C  G +D A K ++E 
Sbjct: 521 TYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580

Query: 471 LNKGCAVNVVNFTSLIRG---------------------------------FCQKGDLEE 497
                  +V  +  +I G                                 F + G LE 
Sbjct: 581 KQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEI 640

Query: 498 ALSLLDDMYLCKKDPDTVT----YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           AL L ++  L    P +      + T+I+ LS   + ++A EL   M+S+G +P +    
Sbjct: 641 ALELNEE--LSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILV 698

Query: 554 TVIHRYCQVGRVEDLLKLLEKM 575
            +I    +V R E+ L+LL+ +
Sbjct: 699 HLIKGLLRVNRWEEALQLLDSI 720



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 139/352 (39%), Gaps = 45/352 (12%)

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G + +  +   F + LC +GK    RE ++  E+E + P+ + Y+ ++ GL     
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGK---WREALSLLEKEEFVPDTVLYTKMISGLCEASL 57

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             EA D +  M      P  +   +L+     + K+   K+ +   + +GC  +   F S
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN----------------- 527
           L+  +C+ GD   A  LL  M  C   P  V Y  +I  +  +                 
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177

Query: 528 -----------------------GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
                                  G+ E+A  ++ +M+SKG +P   TY  VI   C   +
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237

Query: 565 VEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           VE   +L ++M           Y  +I++ C  G++E+A     ++ R     +  T   
Sbjct: 238 VEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
           L+ +YL       A +V   M ++   P++     + + L   GK E+A  +
Sbjct: 298 LIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQI 349



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 113/280 (40%), Gaps = 24/280 (8%)

Query: 139 HDPIVYYM--MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           +DP VY    +++ L K K    A +VL  M      C P    Y  ++    + GK   
Sbjct: 445 YDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLEN--SCAPNVVIYTEMIDGLCKVGKTDE 502

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  ++ MM++    PN++     I       ++ K L  L++M   G  PN +TY  LI 
Sbjct: 503 AYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLIN 562

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY--TVMGYLCKEKRIKEVRDLMEKMVNDS- 311
             C    + +A KL++EM  +   P  V+ Y   + G+    + I  +    E   NDS 
Sbjct: 563 HCCSTGLLDEAHKLLEEMK-QTYWPRHVAGYRKVIEGF--NREFIASLYLSFEISENDSV 619

Query: 312 ----------NLFHDQGRIEEAKELVNQMSQMG--CIPDVVTYTAVVNGFCRVGELDQAK 359
                     + F   GR+E A EL  ++S        +   +  ++       + D+A 
Sbjct: 620 PVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAF 679

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           ++   M   G  P        + GL    +  EA +++++
Sbjct: 680 ELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDS 719


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 251/537 (46%), Gaps = 28/537 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  ++  L K    Q A+     + R G        + L++A  R   L  A  V   
Sbjct: 195 IDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK 254

Query: 202 MQKAA-VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           M K     PN +  +  IH L    +L +A +  + M   G  P+  TY  LIK  CD+ 
Sbjct: 255 MSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG 314

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
               A+K++DEM  K C P+  +Y  ++  LC+E                       G+I
Sbjct: 315 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCRE-----------------------GKI 351

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           EEA  +  +M + G  P ++T+ A++NG+C+ G +  A ++L  M    CKPN  +Y   
Sbjct: 352 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 411

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           + GLC   KS +A  ++    +    P+ +TY++++ G  +EG+L+ A ++   M   G 
Sbjct: 412 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 471

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P       LI  LC+ G+++ A   +   + KG +++ V FT+LI G C+ G  ++   
Sbjct: 472 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 531

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L ++M   +      T+   +DAL K+ ++ EA  ++ KM+  GLVP+VVT+  +I  +C
Sbjct: 532 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 591

Query: 561 QVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           + G     LK+LE+M  +  C      Y  +I  LC+ G +EEA  IL  +       + 
Sbjct: 592 RAGETALSLKMLERM-KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 650

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            T  VLV++++  G    A+++   M      P+  +   +    +L   +  A  L
Sbjct: 651 FTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 707



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 151/600 (25%), Positives = 266/600 (44%), Gaps = 30/600 (5%)

Query: 99  LRNLLRSLKPRQICAVLRSQADE-RVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
           L++L   + P     ++  Q++   + ++FF W  RQ  Y +D      +L +L    L 
Sbjct: 60  LKSLASHMTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLF 119

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
             A++ + L+ +   EC       + +  +  G     M  L           LL+C   
Sbjct: 120 GVAQKAVVLLIQ---ECEDSENGVVKLMGALDG-----MTELGFRLSYPCYSTLLMCLAK 171

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +++  V      A     RM   G     + Y  ++   C    ++ A     ++   G 
Sbjct: 172 LNMGFV------AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGF 225

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN----------LFH---DQGRIEEAK 324
             D     +++   C+   + E   + EKM  + N          L H   + GR+EEA 
Sbjct: 226 GLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAF 285

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +L  +M + GC P   TYT ++   C +G  D+A KML +M    C PN  +YT  ++ L
Sbjct: 286 QLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRL 345

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  GK  EA  +     +    P  IT++ +++G  +EG +  A  ++  M K    P  
Sbjct: 346 CREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNI 405

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
              N L++ LCR  K   A   ++  ++ G   + V +  L+ GFC++G L  A ++ + 
Sbjct: 406 RTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNS 465

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M     +PD  T+T +ID L K GR+E+A  ++  M+ KG+    VT+  +I  +C++G+
Sbjct: 466 MNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGK 525

Query: 565 VEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
            +D+  L E M+  +   TA  +N  ++ L     L EA  +LGK+++        T  +
Sbjct: 526 AKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTI 585

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L+E +   G   L+ K+  RM      P++     +   L   G+ EEA+T++      G
Sbjct: 586 LIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 645



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 227/503 (45%), Gaps = 72/503 (14%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y ++++ L +    + A  V R M + G+      F+ L+  Y + G + +A  +LS+M
Sbjct: 337 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 396

Query: 203 QKAAVAPNLLICN-------------------------------TAIHVLVVG----NKL 227
           +K    PN+   N                                  ++LV G     +L
Sbjct: 397 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 456

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
             A      M  AG+ P+  T+  LI G C L R++ A  ++  M  KG S D+V++  +
Sbjct: 457 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 516

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDS--------NLFHD----QGRIEEAKELVNQMSQMGC 335
           +   CK  + K+V  L E MV +         N F D      ++ EA  ++ +M + G 
Sbjct: 517 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 576

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           +P VVT+T ++ G CR GE   + KML++M   GC PN  +YT  +NGLC+NG+  EA  
Sbjct: 577 VPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAET 636

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI---- 451
           ++ +      +PN  TY+V++    + G+L  A  +V  MVK G  P     + L+    
Sbjct: 637 ILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFV 696

Query: 452 --------QSLCREGKMDGAKKFMQE----CLN---KGCAV---NVVNFTSLIRGFCQKG 493
                   ++L   G +D      +E    CL+   K C V   ++ NF  L+ G C++G
Sbjct: 697 LSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNF--LVVGLCKEG 754

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            + EA  L  DM      PD    ++II+   K  + +   E M  +L    VP+  +Y 
Sbjct: 755 RIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYC 813

Query: 554 TVIHRYCQVGRVEDLLKLLEKML 576
            VIH     GRV++  KL+  ++
Sbjct: 814 WVIHGLRNEGRVQEAQKLVSDLV 836



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 187/407 (45%), Gaps = 44/407 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   +  +++ L K    + A  +L  M ++GI      F+ L+  + + GK ++  ++ 
Sbjct: 474 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 533

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +          N  +  L    KL +A   L +M   G+ P+V+T+  LI+G+C  
Sbjct: 534 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRA 593

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
                ++K+++ M   GCSP+  +Y  ++  LC                       + GR
Sbjct: 594 GETALSLKMLERMKQAGCSPNVYTYTIIINGLC-----------------------NNGR 630

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +EEA+ ++  MS  G  P+  TY  +V    + G LD+A +++  M  +GC+PN+  Y+A
Sbjct: 631 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 690

Query: 380 FLNGLCHNGKSLEAREMINT---------SEE-----------EWWTPNAITYSVVMHGL 419
            L+G   +  ++ AR + +T         SEE           +   P    Y+ ++ GL
Sbjct: 691 LLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGL 750

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            +EG++ EA  + ++MVK G FP    I+ +I+  C+  K D   +FM+  L+     + 
Sbjct: 751 CKEGRIIEADQLTQDMVKHGLFPDKA-ISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSF 809

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            ++  +I G   +G ++EA  L+ D+       + V  T  I+ L K
Sbjct: 810 ASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMK 856



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 140/318 (44%), Gaps = 4/318 (1%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
            L+ L K      A  +L  M + G+       + L+  + RAG+   ++ +L  M++A 
Sbjct: 551 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 610

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
            +PN+      I+ L    ++ +A   L  M   G++PN  TY  L+K +    R+  A 
Sbjct: 611 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 670

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKEL 326
           +++  M   GC P+   Y  ++            R L      D+     +    +   L
Sbjct: 671 QIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEEN--DNNCL 728

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
            N++ + G +P    Y  +V G C+ G + +A ++ Q M  HG  P+  + ++ +   C 
Sbjct: 729 SNEIKKCG-VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCK 786

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
             K     E +    +  + P+  +Y  V+HGLR EG++ EA  +V ++V+       VE
Sbjct: 787 TCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVE 846

Query: 447 INLLIQSLCREGKMDGAK 464
           +   I+ L +E + D  K
Sbjct: 847 VTPSIEFLMKEEEDDPDK 864


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 258/546 (47%), Gaps = 36/546 (6%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMAR-RGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMM 202
           ++L+ L      Q A  +L +MA  RG    P+  SY  V   + + G    A      M
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
               ++P+++  ++ I  L  G  + KA+  L  M   G+ PN +TYN ++ GYC   + 
Sbjct: 223 LDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQP 282

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
           K+AI  + +M   G  PD V+Y ++M YLCK                        GR  E
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYNSLMDYLCK-----------------------NGRSTE 319

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A+++ + M++ G  PD+ TY  ++ G+   G L +   +L  M  +G  P+   +   + 
Sbjct: 320 ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILIC 379

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
                 K  EA  + +   +    PN +TY  V+  L + G + +A     +M+ +G  P
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             +    LI SLC   K D A++ + E L++G  +N + F S+I   C++G + E+  L 
Sbjct: 440 NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLF 499

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           D M      P+ +TY+T+ID     G+++EAT+L+  M S G+ P  VTY T+I+ YC+V
Sbjct: 500 DLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRV 559

Query: 563 GRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
            R++D L L ++M+S         YN +++ L        A ++   + ++ ++ + ST 
Sbjct: 560 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTY 619

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE----GKSEEADTLML 676
           ++++       +       A RMF    + DL+L  +    +I      G+++EA  L +
Sbjct: 620 NIILHGLCKNNLT----DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFV 675

Query: 677 RFVERG 682
            F   G
Sbjct: 676 AFSSNG 681



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 227/489 (46%), Gaps = 27/489 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K      A+++   M +RG+E     +  L+  Y+  G L     +L
Sbjct: 300 DVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALL 359

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +  + P+  + N  I       K+ +A+    +M+  G+ PNV+TY  +I   C  
Sbjct: 360 DLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKS 419

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             + DA+   ++M  +G +P+ + Y +++  LC                    +F    +
Sbjct: 420 GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC--------------------IFD---K 456

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            ++A+EL+ +M   G   + + + ++++  C+ G + +++K+   M   G KPN ++Y+ 
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G C  GK  EA +++++       P+ +TY+ +++G  R  ++ +A  + +EMV  G
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  +  N+++Q L    +   AK+        G  + +  +  ++ G C+    +EAL
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEAL 636

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +  ++ L     +T T+  +I AL K GR +EA +L +   S GLVP   TYR +    
Sbjct: 637 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 696

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
              G +E+L +L   M     C       N ++  L   G +  AG  L  +       +
Sbjct: 697 IGQGLLEELDQLFFSM-EDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 755

Query: 617 ASTCHVLVE 625
           AST  + ++
Sbjct: 756 ASTASLFID 764



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 224/469 (47%), Gaps = 21/469 (4%)

Query: 228 AKALRFLERMQLAG---ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           A A+    RM  AG   +TP V TY  LI   C   R+      +  +  KG   + +++
Sbjct: 66  AAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITF 125

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVND----SNLFH---------DQGRIEEAKELVNQMS 331
             ++  LC +KR  +  D++ + + +     ++F          D+ R +EA EL++ M+
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMA 185

Query: 332 Q---MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
                G  PDVV+YT V+NGF + G+ D+A     +M      P+ V+Y++ +  LC   
Sbjct: 186 DDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQ 245

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              +A E++ T  +    PN +TY+ ++HG     +  EA   +++M   G  P  V  N
Sbjct: 246 AMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYN 305

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            L+  LC+ G+   A+K       +G   ++  + +L++G+  KG L E  +LLD M   
Sbjct: 306 SLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRN 365

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD   +  +I A +K  +V+EA  +  KM   GL P VVTY  VI   C+ G V+D 
Sbjct: 366 GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDA 425

Query: 569 LKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           +   E+M+ +        Y  +I +LC F   ++A +++ ++L      +    + ++ S
Sbjct: 426 MLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHS 485

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           +  +G  + + K+   M    + P++     + +   L GK +EA  L+
Sbjct: 486 HCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL 534



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/399 (23%), Positives = 172/399 (43%), Gaps = 44/399 (11%)

Query: 328 NQMSQMGC---IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           N+M++ G     P V TY  ++   CR G LD     L  +   G +   +++T  L GL
Sbjct: 73  NRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGL 132

Query: 385 CHNGKSLEAREMI--------------------------NTSEEEW-------------W 405
           C + ++ +A +++                          N S+E                
Sbjct: 133 CADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGS 192

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+ ++Y+ V++G  +EG   +A     EM+ +   P  V  + +I +LC+   MD A +
Sbjct: 193 APDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAME 252

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            +   +  G   N + + S++ G+C     +EA+  L  M     +PD VTY +++D L 
Sbjct: 253 VLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLC 312

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
           KNGR  EA ++   M  +GL P + TY T++  Y   G + ++  LL+ M+         
Sbjct: 313 KNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHH 372

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            +N +I        ++EA  +  K+ +     +  T   ++      G    A     +M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +  L P++ +   +   L +  K ++A+ L+L  ++RG
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 101/471 (21%), Positives = 189/471 (40%), Gaps = 69/471 (14%)

Query: 104 RSLKP--RQICAVLRSQADERVALQFFYWADRQWR--YRHDPIVYYMMLEILSKTKLCQG 159
           R L+P     C +L+  A +   ++     D   R     D  V+ +++   +K +    
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDE 389

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  V   M + G+      +  ++    ++G + +AM     M    + PN+++  + IH
Sbjct: 390 AMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 449

Query: 220 VLVVGNKLAKA----LRFLER-------------------------------MQLAGITP 244
            L + +K  KA    L  L+R                               M   G+ P
Sbjct: 450 SLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKP 509

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           NV+TY+ LI GYC   ++ +A KL+  M   G  PD V+Y T++   C+  R+ +   L 
Sbjct: 510 NVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALF 569

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           ++MV+                        G  P+++TY  ++ G         AK++   
Sbjct: 570 KEMVSS-----------------------GVSPNIITYNIILQGLFHTRRTAAAKELYVG 606

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           +   G +    +Y   L+GLC N  + EA  M              T+++++  L + G+
Sbjct: 607 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 666

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             EA D+       G  P      L+ +++  +G ++   +      + GC V+      
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNF 726

Query: 485 LIRGFCQKGDLEEA---LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           ++R   Q+G++  A   LS++D+ +      +  T +  ID LS  G+ +E
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHF---SLEASTASLFIDLLS-GGKYQE 773


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/356 (32%), Positives = 198/356 (55%), Gaps = 25/356 (7%)

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + +Q A   P  +  N+ I  L    + ++A   LE M  +G  P++ TY  LI G+C  
Sbjct: 43  AAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKS 102

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            +  DA+++ +++  +G  PD V+Y  ++  LCKE R+KE  DL  +M+   +       
Sbjct: 103 KKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS------- 155

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                          C+P+ VTY ++++GFCR+G++D+A  +L++M   G  P+ V+YT 
Sbjct: 156 ---------------CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTT 200

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +NG C   +  +A +++N    +  TPN +T++ +M GL RE +LS+A  ++ EM +K 
Sbjct: 201 LMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 260

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             PT    N ++   CR  +++ A+KFM E ++  C  NVV+F  +IRG C+     EA+
Sbjct: 261 CSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAM 318

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK-GLVPTVVTYRT 554
            L+++    + +PD V YTT+ID L +  +V+EA  +  KML + G +P  +TY T
Sbjct: 319 ELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYST 374



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 173/346 (50%), Gaps = 26/346 (7%)

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           +Q A   P  +TYN LI G C   R  +A  L++EM   GC PD  +Y T++   CK K+
Sbjct: 45  VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                                   ++A  +  Q+   G  PDVVTY+ +++G C+ G L 
Sbjct: 105 S-----------------------DDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 141

Query: 357 QAKKMLQQMYHHG-CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           +A  +  +M   G C PNTV+Y + ++G C  GK  EA  ++    E   +P+ +TY+ +
Sbjct: 142 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 201

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           M+G  +  +L +A D++ +M +KG  P  V    L+  LCRE ++  A   + E   K C
Sbjct: 202 MNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 261

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
           +  V  + +++ G+C+   LEEA   + +   C   P+ V++  +I  L K  R  EA E
Sbjct: 262 SPTVYTYNTILDGYCRVNQLEEARKFMLEEMDCP--PNVVSFNIMIRGLCKVNRSSEAME 319

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           L+ +   +   P VV Y TVI   C+  +V++  ++  KML +  C
Sbjct: 320 LVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGC 365



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 152/282 (53%), Gaps = 1/282 (0%)

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           +P  VTY ++++G C+     +A  +L++M + GC P+  +YT  + G C + KS +A  
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF-FPTPVEINLLIQSL 454
           +        + P+ +TYS ++ GL +EG+L EA D+   M+K G   P  V  N LI   
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CR GKMD A   ++     G + +VV +T+L+ GFC+   L++A  LL+ M      P+ 
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VT+T+++D L +  R+ +A  ++ +M  K   PTV TY T++  YC+V ++E+  K + +
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290

Query: 575 MLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            +       ++N +I  LC      EA +++ +  R     D
Sbjct: 291 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 332



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 173/351 (49%), Gaps = 33/351 (9%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P A +Y  L+    +A +   A  +L  M  +   P++    T I       K   ALR 
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG-CSPDKVSYYTVMGYLC 292
            E++   G  P+V+TY+CLI G C   R+K+AI L   M   G C P+ V+Y +++   C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           +                        G+++EA  L+ +M++ G  PDVVTYT ++NGFC++
Sbjct: 172 R-----------------------MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKL 208

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
             LD A  +L QM   G  PN V++T+ ++GLC   +  +A  ++     +  +P   TY
Sbjct: 209 ARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTY 268

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           + ++ G  R  +L EA   + E  +    P  V  N++I+ LC+  +   A + ++E   
Sbjct: 269 NTILDGYCRVNQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARR 326

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY---LCKKDPDTVTYTTI 520
           + C  +VV +T++I   C++  ++EA  +   M     C   P+++TY+T 
Sbjct: 327 RRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCL--PNSITYSTF 375



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 162/311 (52%), Gaps = 33/311 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  ++    K+K    A RV   +  RG   RP+  +Y  L+    + G+L+ A+ 
Sbjct: 88  DIFTYTTLITGFCKSKKSDDALRVFEQLVARGF--RPDVVTYSCLIDGLCKEGRLKEAID 145

Query: 198 VLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           +   M++  +  PN +  N+ I       K+ +A+  LERM   G +P+V+TY  L+ G+
Sbjct: 146 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 205

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C L R+ DA  L+++M  KG +P+ V++ ++M  LC+E R+                   
Sbjct: 206 CKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLS------------------ 247

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK-MLQQMYHHGCKPNTV 375
                +A  ++ +M +  C P V TY  +++G+CRV +L++A+K ML++M    C PN V
Sbjct: 248 -----DAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM---DCPPNVV 299

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           S+   + GLC   +S EA E++  +      P+ + Y+ V+  L RE K+ EAC V R+M
Sbjct: 300 SFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKM 359

Query: 436 VKK-GFFPTPV 445
           +++ G  P  +
Sbjct: 360 LEEPGCLPNSI 370



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 132/257 (51%), Gaps = 14/257 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           +R D + Y  +++ L K    + A  +   M + G  C P   +Y  L+  + R GK+  
Sbjct: 120 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG-SCMPNTVTYNSLISGFCRMGKMDE 178

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           AM +L  M +   +P+++   T ++      +L  A   L +M   G+TPNV+T+  L+ 
Sbjct: 179 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMD 238

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM-EKMVNDSNL 313
           G C  +R+ DA+ ++ EM  K CSP   +Y T++   C+  +++E R  M E+M    N+
Sbjct: 239 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMDCPPNV 298

Query: 314 FH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                         R  EA ELV +  +  C PDVV YT V++  CR  ++D+A ++ ++
Sbjct: 299 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRK 358

Query: 365 MYHH-GCKPNTVSYTAF 380
           M    GC PN+++Y+ F
Sbjct: 359 MLEEPGCLPNSITYSTF 375



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 120/224 (53%), Gaps = 3/224 (1%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P A+TY+ ++ GL +  + SEA D++ EMV  G  P       LI   C+  K D A + 
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK-DPDTVTYTTIIDALS 525
            ++ + +G   +VV ++ LI G C++G L+EA+ L   M       P+TVTY ++I    
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-- 583
           + G+++EA  L+ +M   G  P VVTY T+++ +C++ R++D   LL +M  K       
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            +  +++ LC    L +A  ILG++ R +      T + +++ Y
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 275



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 3/197 (1%)

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
             V + SLI G C+     EA  LL++M      PD  TYTT+I    K+ + ++A  + 
Sbjct: 53  TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 112

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCS 594
            +++++G  P VVTY  +I   C+ GR+++ + L  +M+    C      YN +I   C 
Sbjct: 113 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 172

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            G ++EA  +L ++  T S  D  T   L+  +        AY +  +M  + L P++  
Sbjct: 173 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVT 232

Query: 655 CKKVSERLILEGKSEEA 671
              + + L  E +  +A
Sbjct: 233 FTSLMDGLCRENRLSDA 249


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 228/458 (49%), Gaps = 27/458 (5%)

Query: 175 RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           +P+A +Y  ++    + G   +A+ +L  M ++ +  N++I +  +  L       KA  
Sbjct: 42  QPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQN 101

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
               M   GI PNVLTYNC+I GYC   +  DA +L+ +M  +   PD V++  ++    
Sbjct: 102 IFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFV 161

Query: 293 KEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
           KE ++    +L  +M+  +            + F    R+E+AK + + M   GC PD++
Sbjct: 162 KEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDII 221

Query: 341 TYTAVVNG-----------FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           T   +++G           FC+VG ++ A+ + Q+M  +G  P+ V+    L GLC NGK
Sbjct: 222 TLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGK 281

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A EM    ++     +  T +++++G+ +  K+ EA D+   +   G     V  N+
Sbjct: 282 LEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNI 341

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI    +EG    A+    E L KG   + V + S++ GFC++  LEEA  ++D M    
Sbjct: 342 LIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEG 401

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             PD VT++T+I    K GRV++  EL  +M  +GLV   +TY  +IH +C+VG +    
Sbjct: 402 CSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQ 461

Query: 570 KLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKIL 605
            + E+M+S   C     +  ++  LC+   L++   +L
Sbjct: 462 DIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTML 499



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 206/422 (48%), Gaps = 40/422 (9%)

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
           GC  + V++ T+M  LC+E                       GR+ +A  LV++M + G 
Sbjct: 5   GCPANVVTFTTLMNGLCRE-----------------------GRVLQALALVDRMVEEGH 41

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PD VTY  +VNG C++G+   A  ML++M     K N V Y+A ++ LC +G  ++A+ 
Sbjct: 42  QPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQN 101

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +     E+   PN +TY+ ++ G    GK S+A  ++R+M+++   P  V  + LI +  
Sbjct: 102 IFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFV 161

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           +EGK+ GA++  +E L +      + ++S+I GFC+   LE+A  + D M      PD +
Sbjct: 162 KEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDII 221

Query: 516 TYTTIID-----------ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           T  T+ID              + G V  A +L  +M+S G+ P +VT  T++   C+ G+
Sbjct: 222 TLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGK 281

Query: 565 VE---DLLKLLEKMLSKQKCRTAY-NQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           +E   ++ K+ +K  SK    TA  N +I  +C    ++EA  +   +     + D  T 
Sbjct: 282 LEKALEMFKVFQK--SKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTY 339

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
           ++L+  ++ +G  L A  +   M  + +IP       + +    + + EEA  ++   V 
Sbjct: 340 NILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVS 399

Query: 681 RG 682
            G
Sbjct: 400 EG 401



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 206/440 (46%), Gaps = 31/440 (7%)

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
            G   NV+T+  L+ G C   R+  A+ L+D M  +G  PD V+Y T++  +CK      
Sbjct: 4   TGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVS 63

Query: 300 VRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
             +++ KM ++S +  +              G   +A+ +  +M + G  P+V+TY  ++
Sbjct: 64  ALNMLRKM-DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMI 122

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G+C  G+   A+++L+ M      P+ V+++A +N     GK   A E+          
Sbjct: 123 DGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIF 182

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE--------- 457
           P  ITYS ++ G  +  +L +A  +   MV KG  P  + +N LI   CR          
Sbjct: 183 PTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFC 242

Query: 458 --GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
             G ++ A+   QE ++ G + ++V   +L+ G C+ G LE+AL +       K D DT 
Sbjct: 243 QVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTA 302

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG---RVEDL-LKL 571
           T   II+ + K  +V+EA +L   +   G+   VVTY  +I  + + G   R ED+ L++
Sbjct: 303 TCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEM 362

Query: 572 LEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           L K +        YN +++  C    LEEA +++  ++      D  T   L++ Y   G
Sbjct: 363 LCKGIIPST--VTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420

Query: 632 IPLLAYKVACRMFNRNLIPD 651
                 ++   M  R L+ D
Sbjct: 421 RVDDGLELFSEMCQRGLVAD 440



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/500 (24%), Positives = 232/500 (46%), Gaps = 67/500 (13%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +     N++   T ++ L    ++ +AL  ++RM   G  P+ +TY  ++ G C L  
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD----- 316
              A+ ++ +M       + V Y  ++  LCK+    + +++  +M ++  +F +     
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEM-HEKGIFPNVLTYN 119

Query: 317 --------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                    G+  +A++L+  M +    PDVVT++A++N F + G++  A+++ ++M   
Sbjct: 120 CMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR 179

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV-----------VMH 417
              P T++Y++ ++G C + +  +A+ M +    +  +P+ IT +            ++H
Sbjct: 180 NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIH 239

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  + G ++ A D+ +EM+  G  P  V  N L+  LC  GK++ A +  +        +
Sbjct: 240 GFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDL 299

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLD-------------------------------DMY 506
           +      +I G C+   ++EA  L +                               D+Y
Sbjct: 300 DTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIY 359

Query: 507 ---LCKK-DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
              LCK   P TVTY +++D   K  R+EEA +++  M+S+G  P VVT+ T+I  YC+ 
Sbjct: 360 LEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKA 419

Query: 563 GRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           GRV+D L+L  +M  +        YN +I   C  G L  A  I  +++ +    D  T 
Sbjct: 420 GRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITF 479

Query: 621 HVLV-----ESYLNKGIPLL 635
             ++     ++ L KG+ +L
Sbjct: 480 RSMLAGLCTKAELQKGLTML 499



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 150/322 (46%), Gaps = 27/322 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS-------------YLMVAYSR 188
           I Y  M++   K    + AK +  LM  +G  C P+  +             +L+  + +
Sbjct: 186 ITYSSMIDGFCKHSRLEDAKHMFDLMVSKG--CSPDIITLNTLIDGCCRAKRHLIHGFCQ 243

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
            G +  A  +   M    V+P+++ CNT +  L    KL KAL   +  Q + +  +  T
Sbjct: 244 VGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTAT 303

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
            N +I G C  +++ +A  L + +P+ G   D V+Y  ++G   KE       D+  +M+
Sbjct: 304 CNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEML 363

Query: 309 NDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
               +            F  Q R+EEA+++V+ M   GC PDVVT++ ++ G+C+ G +D
Sbjct: 364 CKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVD 423

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
              ++  +M   G   +T++Y A ++G C  G    A+++          P+ IT+  ++
Sbjct: 424 DGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSML 483

Query: 417 HGLRREGKLSEACDVVREMVKK 438
            GL  + +L +   ++ ++ K 
Sbjct: 484 AGLCTKAELQKGLTMLEDLQKS 505



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/168 (19%), Positives = 77/168 (45%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y +++ +  K      A+ +   M  +GI      ++ ++  + +  +L  A  ++
Sbjct: 335 DVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMV 394

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M     +P+++  +T I       ++   L     M   G+  + +TYN LI G+C +
Sbjct: 395 DSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKV 454

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
             +  A  + +EM   G  PD +++ +++  LC +  +++   ++E +
Sbjct: 455 GDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDL 502


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 223/422 (52%), Gaps = 16/422 (3%)

Query: 170 RGIECRPEA----FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
           R +  RP      F+ L+   ++  +    + +   MQ   ++P L  CN  ++ +   +
Sbjct: 72  RMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSS 131

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           +  +A  FL +M   G  P+++T+  L+ G+C  +RI+DA+ L D++   G  P+ V+Y 
Sbjct: 132 QPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYT 191

Query: 286 TVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFH---DQGRIEEAKELVNQMSQM 333
           T++  LCK + +    ++  +M         V  ++L     + GR  +A  L+  M + 
Sbjct: 192 TLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKR 251

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  P+V+T+TA+++ F +VG++ +AK++ + M      P+  +YTA +NGLC  G+  EA
Sbjct: 252 GIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEA 311

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
           R+M    E   + PN +TY+ ++HG  +  ++ +   +  EM +KG     +   +LIQ 
Sbjct: 312 RQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQG 371

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C  G+ D A++   +  ++    ++  +  L+ G C  G +E+AL +   M   + D +
Sbjct: 372 YCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDIN 431

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VTYT II  + K G+VE+A +L   + SKG+ P V+TY T+I  +C+ G + +   L +
Sbjct: 432 IVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFK 491

Query: 574 KM 575
           KM
Sbjct: 492 KM 493



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 183/381 (48%), Gaps = 23/381 (6%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M + G E     F+ L+  +    ++ +A+ +   +      PN++   T IH L     
Sbjct: 143 MMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRH 202

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L  A+    +M   GI PNV+TYN L+ G C++ R  DA  L+ +M  +G  P+ +++  
Sbjct: 203 LNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTA 262

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++                       + F   G+I EAKEL   M QM   PDV TYTA++
Sbjct: 263 LI-----------------------DAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALI 299

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           NG C  G LD+A++M   M  +G  PN V+YT  ++G C + +  +  ++     ++   
Sbjct: 300 NGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLV 359

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            N ITY+V++ G    G+   A +V  +M  +   P     N+L+  LC  G ++ A   
Sbjct: 360 ANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMI 419

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +    +   +N+V +T +I+G C+ G +E+A  L   ++     P+ +TYTT+I    +
Sbjct: 420 FKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 479

Query: 527 NGRVEEATELMMKMLSKGLVP 547
            G + EA  L  KM   G +P
Sbjct: 480 RGFIHEADALFKKMKEDGFLP 500



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 222/466 (47%), Gaps = 27/466 (5%)

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           +  +AL    RM  +   P+++ +  L+     + R    I L ++M + G SP   +  
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            VM  +C+  +                          A   + +M ++G  PD+VT+T++
Sbjct: 122 IVMNCVCRSSQPCR-----------------------ASCFLGKMMKLGFEPDLVTFTSL 158

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++GFC    ++ A  +  Q+   G +PN V+YT  ++ LC N     A E+ N   +   
Sbjct: 159 LHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGI 218

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            PN +TY+ ++ GL   G+ S+A  ++R+M+K+G  P  +    LI +  + GK+  AK+
Sbjct: 219 RPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKE 278

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             +  +      +V  +T+LI G C  G L+EA  +   M      P+ VTYTT+I    
Sbjct: 279 LYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFC 338

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK---CR 582
           K+ RVE+ T++  +M  KGLV   +TY  +I  YC VGR +   ++  +M S++     R
Sbjct: 339 KSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIR 398

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
           T YN +++ LC  GY+E+A  I   + +     +  T  ++++     G    A+ + C 
Sbjct: 399 T-YNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCS 457

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           +F++ + P++     +       G   EAD L  +  E G +  +S
Sbjct: 458 LFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNES 503



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 152/335 (45%), Gaps = 27/335 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           +R + + Y  ++  L K +    A  +   M   GI  RP   +Y  L+      G+  +
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGI--RPNVVTYNSLVSGLCEIGRWSD 240

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A ++L  M K  + PN++     I   V   K+ +A    + M    + P+V TY  LI 
Sbjct: 241 AAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALIN 300

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G C   R+ +A ++   M   G  P++V+Y T++   CK KR+                 
Sbjct: 301 GLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRV----------------- 343

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
                 E+  ++  +MSQ G + + +TYT ++ G+C VG  D A+++  QM      P+ 
Sbjct: 344 ------EDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDI 397

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +Y   L+GLC+NG   +A  +     +     N +TY++++ G+ + GK+ +A D+   
Sbjct: 398 RTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCS 457

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           +  KG  P  +    +I   CR G +  A    ++
Sbjct: 458 LFSKGMKPNVITYTTMISGFCRRGFIHEADALFKK 492



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 18/284 (6%)

Query: 364 QMYHHGCKPNTVSYTAFL--------------NGLCHNGKSLEAREMINTSEEEWWTPNA 409
           Q+ +HG  P T+S   F               NGL HN +  EA ++          P+ 
Sbjct: 25  QISNHGASP-TLSLCGFCFWIRAFSNYRKILRNGL-HNLQFNEALDLFTRMVHSRPLPSI 82

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           + ++ ++  + +  +      +  +M   G  P     N+++  +CR  +   A  F+ +
Sbjct: 83  VDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGK 142

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            +  G   ++V FTSL+ GFC    +E+AL+L D +      P+ VTYTT+I  L KN  
Sbjct: 143 MMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRH 202

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
           +  A E+  +M   G+ P VVTY +++   C++GR  D   LL  M+ +  Q     +  
Sbjct: 203 LNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTA 262

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +I+     G + EA ++   +++ +   D  T   L+      G
Sbjct: 263 LIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYG 306



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/193 (19%), Positives = 71/193 (36%), Gaps = 36/193 (18%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A Q FY  +    Y ++ + Y  ++    K+K  +   ++   M+++G+      ++ L+
Sbjct: 311 ARQMFYLMESNGYYPNE-VTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLI 369

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ----- 238
             Y   G+   A  V + M      P++   N  +  L     + KAL   + M+     
Sbjct: 370 QGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMD 429

Query: 239 ------------------------------LAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
                                           G+ PNV+TY  +I G+C    I +A  L
Sbjct: 430 INIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADAL 489

Query: 269 IDEMPLKGCSPDK 281
             +M   G  P++
Sbjct: 490 FKKMKEDGFLPNE 502


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 251/537 (46%), Gaps = 28/537 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  ++  L K    Q A+     + R G        + L++A  R   L  A  V   
Sbjct: 172 IDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK 231

Query: 202 MQKAA-VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           M K     PN +  +  IH L    +L +A +  + M   G  P+  TY  LIK  CD+ 
Sbjct: 232 MSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG 291

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
               A+K++DEM  K C P+  +Y  ++  LC+E                       G+I
Sbjct: 292 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCRE-----------------------GKI 328

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           EEA  +  +M + G  P ++T+ A++NG+C+ G +  A ++L  M    CKPN  +Y   
Sbjct: 329 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 388

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           + GLC   KS +A  ++    +    P+ +TY++++ G  +EG+L+ A ++   M   G 
Sbjct: 389 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 448

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P       LI  LC+ G+++ A   +   + KG +++ V FT+LI G C+ G  ++   
Sbjct: 449 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 508

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L ++M   +      T+   +DAL K+ ++ EA  ++ KM+  GLVP+VVT+  +I  +C
Sbjct: 509 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 568

Query: 561 QVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           + G     LK+LE+M  +  C      Y  +I  LC+ G +EEA  IL  +       + 
Sbjct: 569 RAGETALSLKMLERM-KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNH 627

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            T  VLV++++  G    A+++   M      P+  +   +    +L   +  A  L
Sbjct: 628 FTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 684



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 151/600 (25%), Positives = 266/600 (44%), Gaps = 30/600 (5%)

Query: 99  LRNLLRSLKPRQICAVLRSQADE-RVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
           L++L   + P     ++  Q++   + ++FF W  RQ  Y +D      +L +L    L 
Sbjct: 37  LKSLASHMTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLF 96

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
             A++ + L+ +   EC       + +  +  G     M  L           LL+C   
Sbjct: 97  GVAQKAVVLLIQ---ECEDSENGVVKLMGALDG-----MTELGFRLSYPCYSTLLMCLAK 148

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +++  V      A     RM   G     + Y  ++   C    ++ A     ++   G 
Sbjct: 149 LNMGFV------AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGF 202

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN----------LFH---DQGRIEEAK 324
             D     +++   C+   + E   + EKM  + N          L H   + GR+EEA 
Sbjct: 203 GLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAF 262

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +L  +M + GC P   TYT ++   C +G  D+A KML +M    C PN  +YT  ++ L
Sbjct: 263 QLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRL 322

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  GK  EA  +     +    P  IT++ +++G  +EG +  A  ++  M K    P  
Sbjct: 323 CREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNI 382

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
              N L++ LCR  K   A   ++  ++ G   + V +  L+ GFC++G L  A ++ + 
Sbjct: 383 RTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNS 442

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M     +PD  T+T +ID L K GR+E+A  ++  M+ KG+    VT+  +I  +C++G+
Sbjct: 443 MNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGK 502

Query: 565 VEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
            +D+  L E M+  +   TA  +N  ++ L     L EA  +LGK+++        T  +
Sbjct: 503 AKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTI 562

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L+E +   G   L+ K+  RM      P++     +   L   G+ EEA+T++      G
Sbjct: 563 LIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFG 622



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 227/519 (43%), Gaps = 88/519 (16%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y ++++ L +    + A  V R M + G+      F+ L+  Y + G + +A  +LS+M
Sbjct: 314 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 373

Query: 203 QKAAVAPNLLICN-------------------------------TAIHVLVVG----NKL 227
           +K    PN+   N                                  ++LV G     +L
Sbjct: 374 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 433

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
             A      M  AG+ P+  T+  LI G C L R++ A  ++  M  KG S D+V++  +
Sbjct: 434 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 493

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDS--------NLFHD----QGRIEEAKELVNQMSQMGC 335
           +   CK  + K+V  L E MV +         N F D      ++ EA  ++ +M + G 
Sbjct: 494 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 553

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           +P VVT+T ++ G CR GE   + KML++M   GC PN  +YT  +NGLC+NG+  EA  
Sbjct: 554 VPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAET 613

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI---- 451
           ++ +      +PN  TY+V++    + G+L  A  +V  MVK G  P     + L+    
Sbjct: 614 ILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFV 673

Query: 452 --------QSLCREGKMDGAKKFMQE----CLN-------------------KGCAV--- 477
                   ++L   G +D      +E    CL+                   K C V   
Sbjct: 674 LSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTE 733

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           ++ NF  L+ G C++G + EA  L  DM      PD    ++II+   K  + +   E M
Sbjct: 734 DLYNF--LVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFM 790

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
             +L    VP+  +Y  VIH     GRV++  KL+  ++
Sbjct: 791 KLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 829



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 187/423 (44%), Gaps = 60/423 (14%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   +  +++ L K    + A  +L  M ++GI      F+ L+  + + GK ++  ++ 
Sbjct: 451 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 510

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +          N  +  L    KL +A   L +M   G+ P+V+T+  LI+G+C  
Sbjct: 511 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRA 570

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
                ++K+++ M   GCSP+  +Y  ++  LC                       + GR
Sbjct: 571 GETALSLKMLERMKQAGCSPNVYTYTIIINGLC-----------------------NNGR 607

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +EEA+ ++  MS  G  P+  TY  +V    + G LD+A +++  M  +GC+PN+  Y+A
Sbjct: 608 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 667

Query: 380 FLNGLCHNGKSLEAREMINT---------SEE---------------------------E 403
            L+G   +  ++ AR + +T         SEE                           +
Sbjct: 668 LLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKK 727

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P    Y+ ++ GL +EG++ EA  + ++MVK G FP    I+ +I+  C+  K D  
Sbjct: 728 CGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA-ISSIIEHYCKTCKYDNC 786

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            +FM+  L+     +  ++  +I G   +G ++EA  L+ D+       + V  T  I+ 
Sbjct: 787 LEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEF 846

Query: 524 LSK 526
           L K
Sbjct: 847 LMK 849



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 150/332 (45%), Gaps = 16/332 (4%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
            L+ L K      A  +L  M + G+       + L+  + RAG+   ++ +L  M++A 
Sbjct: 528 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 587

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
            +PN+      I+ L    ++ +A   L  M   G++PN  TY  L+K +    R+  A 
Sbjct: 588 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 647

Query: 267 KLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRI-----KEVRDLMEKMV----NDSNLFHD 316
           +++  M   GC P+   Y  ++ G++     I         DL  + +    ND+N    
Sbjct: 648 QIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSS 707

Query: 317 Q----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                  ++ A ++ +++ + G +P    Y  +V G C+ G + +A ++ Q M  HG  P
Sbjct: 708 HVFRLMDVDHALKIRDEIKKCG-VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 766

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           +  + ++ +   C   K     E +    +  + P+  +Y  V+HGLR EG++ EA  +V
Sbjct: 767 DK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLV 825

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
            ++V+       VE+   I+ L +E + D  K
Sbjct: 826 SDLVRHTGIEEEVEVTPSIEFLMKEEEDDPDK 857


>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 533

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 243/472 (51%), Gaps = 30/472 (6%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWR-YRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           L P+++ +++  Q +  +ALQ F +A +    + H+   Y+ +L  LS+ +     + ++
Sbjct: 45  LFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLM 104

Query: 165 RLM--ARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
             +  +   I+C    F  L+  Y  AG+  ++M +   +    V  ++   NT ++VL+
Sbjct: 105 ADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLI 164

Query: 223 VGNK--LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
              +  L  A+ F    +  GITPN+ T N L+K  C  + I+ A K++DE+P  G  P+
Sbjct: 165 QNQRFDLVHAM-FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPN 223

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
            V+Y T++G                        +  +G +E AK ++ +M   G  PD +
Sbjct: 224 LVTYTTILGG-----------------------YVARGDMESAKRVLEEMLDRGWYPDAI 260

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TYT +++G+C++G   +A  ++  M  +  +PN V+Y   +  LC   KS EAR M +  
Sbjct: 261 TYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 320

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
            +  + P++     V+  L  + K+ EAC + R+M+K    P    ++ LI  LC+EG++
Sbjct: 321 LDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRV 380

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             A+K   E  +KG   +++ + +LI G C+KG+L EA  L DDM+  K  P+  TY  +
Sbjct: 381 SEARKLFDE-FDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVL 439

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           I+ LSKNG V+E   ++ +ML  G  P   T+  +     ++G+ ED +K++
Sbjct: 440 IEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIV 491



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 157/313 (50%), Gaps = 15/313 (4%)

Query: 176 PEAFS--YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P  F+   L+ A  +   + +A  VL  +    + PNL+   T +   V    +  A R 
Sbjct: 187 PNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRV 246

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           LE M   G  P+ +TY  L+ GYC L R  +A  ++D+M      P++V+Y  ++  LCK
Sbjct: 247 LEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 306

Query: 294 EKRIKEVRDLMEKMVN-----DSNL-------FHDQGRIEEAKELVNQMSQMGCIPDVVT 341
           EK+  E R++ ++M++     DS+L         +  +++EA  L  +M +  C+PD   
Sbjct: 307 EKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNAL 366

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
            + +++  C+ G + +A+K+  + +  G  P+ ++Y   + G+C  G+  EA  + +   
Sbjct: 367 LSTLIHWLCKEGRVSEARKLFDE-FDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMF 425

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           E    PNA TY+V++ GL + G + E   V+ EM++ G FP      +L + L + GK +
Sbjct: 426 ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEE 485

Query: 462 GAKKFMQECLNKG 474
            A K +   +  G
Sbjct: 486 DAIKIVSMAVMNG 498



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 183/441 (41%), Gaps = 22/441 (4%)

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-------SNLFHD-------QGRIE 321
           G + +  +Y++++  L + +    V  LM  + N         NLF D        GR E
Sbjct: 76  GFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYE 135

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH-GCKPNTVSYTAF 380
            +  +  ++   G    V +   ++N   +    D    M +      G  PN  +    
Sbjct: 136 SSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLL 195

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           +  LC       A ++++        PN +TY+ ++ G    G +  A  V+ EM+ +G+
Sbjct: 196 VKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGW 255

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
           +P  +   +L+   C+ G+   A   M +        N V +  +IR  C++    EA +
Sbjct: 256 YPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARN 315

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           + D+M      PD+     +IDAL ++ +V+EA  L  KML    +P      T+IH  C
Sbjct: 316 MFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 375

Query: 561 QVGRVEDLLKLLEKMLSKQ-KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
           + GRV +  KL ++           YN +I  +C  G L EAG++   +     K +A T
Sbjct: 376 KEGRVSEARKLFDEFDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFT 435

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
            +VL+E     G      +V   M      P+      + E L   GK E+A  ++   V
Sbjct: 436 YNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAV 495

Query: 680 ERGHIQPKSEEHLQRQRVFLN 700
             G +  +S E      +FLN
Sbjct: 496 MNGKVDKESWE------LFLN 510



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 122/284 (42%), Gaps = 28/284 (9%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           + AKRVL  M  RG    P+A +Y  LM  Y + G+   A  V+  M+K  + PN +   
Sbjct: 241 ESAKRVLEEMLDRG--WYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYG 298

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             I  L    K  +A    + M      P+      +I   C+ H++ +A  L  +M   
Sbjct: 299 VMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKN 358

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
            C PD     T++ +LCKE R+ E R L ++                           G 
Sbjct: 359 NCMPDNALLSTLIHWLCKEGRVSEARKLFDEF------------------------DKGS 394

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           IP ++TY  ++ G C  GEL +A ++   M+   CKPN  +Y   + GL  NG   E   
Sbjct: 395 IPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVR 454

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
           ++    E    PN  T+ ++  GL++ GK  +A  +V   V  G
Sbjct: 455 VLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNG 498


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 243/545 (44%), Gaps = 28/545 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRL---MARRGIECRPEAFSYLMVAYSRAGKLR 193
           + H P       ++L+     +    VL L   M   G+       + L+ ++    ++ 
Sbjct: 49  HMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVG 108

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  VL+ + K    P+     T I  L V  K+ +AL   ++M   G  PNV+TY  LI
Sbjct: 109 FAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLI 168

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            G C +     AI+L+  M    C PD V Y +++  LCK++++ E  +L  +MV     
Sbjct: 169 NGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ--- 225

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                               G  PD+ TYT++V+  C + E      +L QM +    P+
Sbjct: 226 --------------------GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPD 265

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            V ++  ++ LC  GK  EA E+++   +    P+ +TY+ +M G   + ++ EA  V  
Sbjct: 266 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 325

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            MV+KGF P  +    LI   C+  K+D A    +E   K    +   + +L+ G C  G
Sbjct: 326 MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVG 385

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            L++A++L  +M    + PD VTY+ ++D+L KN  +EEA  L+  + +  L P +  Y 
Sbjct: 386 RLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYN 445

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            +I   C+ G +E    L   + SK        YN +I  LC  G L EA K+  ++   
Sbjct: 446 IIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGN 505

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
               D  T + +   +L     L A ++   M  R    D+     + E L  +G  + +
Sbjct: 506 DCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSS 565

Query: 672 DTLML 676
             LML
Sbjct: 566 CFLML 570



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 233/471 (49%), Gaps = 18/471 (3%)

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           +  L    +M   G+ PNV T N LI  +C L+R+  A  ++ ++   G  PD  ++ T+
Sbjct: 73  STVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTL 132

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGC 335
           +  LC E +I E   L +KM+++             N     G    A  L+  M Q  C
Sbjct: 133 IRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNC 192

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PDVV YT++++  C+  ++ +A  +  QM   G  P+  +YT+ ++ LC+  +      
Sbjct: 193 QPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTT 252

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           ++N        P+ + +S V+  L +EGK++EA ++V  M+++G  P  V    L+   C
Sbjct: 253 LLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHC 312

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD--PD 513
            + +MD A K     + KG A +V+++T+LI G+C+   +++A+ L ++M  C+K+  PD
Sbjct: 313 LQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEM--CRKEWIPD 370

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
           T TY T++  L   GR+++A  L  +M+++G +P +VTY  ++   C+   +E+ + LL+
Sbjct: 371 TKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLK 430

Query: 574 KMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            + +         YN +I+ +C  G LE A  +   +          T ++++     +G
Sbjct: 431 AIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRG 490

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +   A K+   M   +  PD      ++   +   ++  A  L+   + RG
Sbjct: 491 LLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 541



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/497 (24%), Positives = 232/497 (46%), Gaps = 20/497 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           ++ DP  +  ++  L        A  +   M   G +     +  L+    + G    A+
Sbjct: 122 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 181

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M++    P+++I  + I  L    ++ +A     +M   GI+P++ TY  L+   
Sbjct: 182 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 241

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------- 307
           C+L   K    L+++M      PD V + TV+  LCKE ++ E  ++++ M         
Sbjct: 242 CNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDV 301

Query: 308 VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           V  + L      Q  ++EA ++ + M + G  PDV++YT ++NG+C++ ++D+A  + ++
Sbjct: 302 VTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEE 361

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M      P+T +Y   ++GLCH G+  +A  + +        P+ +TYS+++  L +   
Sbjct: 362 MCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCH 421

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L EA  +++ +      P     N++I  +CR G+++ A+       +KG   +V  +  
Sbjct: 422 LEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNI 481

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +I G C++G L EA  L  +M      PD  TY TI     +N     A +L+ +ML++G
Sbjct: 482 MIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 541

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGY------L 598
               V T   ++      G  +    L+  +LS+   R  +  + E     G+      L
Sbjct: 542 FSADVSTTTLLVEMLSDDGLDQSSCFLMLSVLSEDD-RRYFIFIPEGFDLLGWEFMRCKL 600

Query: 599 EEAGKILGKVLRTASKA 615
           +E  KI G+V ++ +KA
Sbjct: 601 KELAKI-GEVSKSGTKA 616



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 179/364 (49%), Gaps = 3/364 (0%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L  QM   G  P+V T   ++N FC +  +  A  +L ++   G +P+  ++T  + GL
Sbjct: 77  SLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGL 136

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  GK  EA  + +   +E + PN +TY  +++GL + G  S A  ++R M +    P  
Sbjct: 137 CVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDV 196

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V    +I SLC++ ++  A     + + +G + ++  +TSL+   C   + +   +LL+ 
Sbjct: 197 VIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQ 256

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M   K  PD V ++T++DAL K G+V EA E++  M+ +G+ P VVTY T++  +C    
Sbjct: 257 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 316

Query: 565 VEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           +++ +K+ + M+ K       +Y  +I   C    +++A  +  ++ R     D  T + 
Sbjct: 317 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNT 376

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L+    + G    A  +   M  R  +PDL     + + L      EEA  L L+ +E  
Sbjct: 377 LMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMAL-LKAIEAS 435

Query: 683 HIQP 686
           ++ P
Sbjct: 436 NLNP 439



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 173/384 (45%), Gaps = 16/384 (4%)

Query: 312 NLFHDQG----RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N FH +      +++A    N++  M   P +V +  ++    ++        +  QM  
Sbjct: 25  NNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDS 84

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN  +    +N  CH  +   A  ++    +    P+  T++ ++ GL  EGK+ E
Sbjct: 85  FGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGE 144

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +  +M+ +GF P  V    LI  LC+ G    A + ++      C  +VV +TS+I 
Sbjct: 145 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 204

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
             C+   + EA +L   M      PD  TYT+++ AL      +  T L+ +M++  ++P
Sbjct: 205 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 264

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            VV + TV+   C+ G+V +  ++++ M+ +  +     Y  +++  C    ++EA K+ 
Sbjct: 265 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 324

Query: 606 GKVLRTASKADASTCHVLVESY-----LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
             ++R     D  +   L+  Y     ++K + L  ++  CR   +  IPD K    +  
Sbjct: 325 DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL--FEEMCR---KEWIPDTKTYNTLMH 379

Query: 661 RLILEGKSEEADTLMLRFVERGHI 684
            L   G+ ++A  L    V RG +
Sbjct: 380 GLCHVGRLQDAIALFHEMVARGQM 403


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 245/519 (47%), Gaps = 36/519 (6%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           R M  R + C   +F+ LM  +    KL  A+     + K    P ++  +T +H L V 
Sbjct: 102 RKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVE 161

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           +++++AL    +M      PNV+T+  L+ G C   R+ +A+ L+D M   G  P++++Y
Sbjct: 162 DRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITY 217

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDS------------------NLFHDQGRIEEAKEL 326
            T++  +CK        +L+ KM   S                  N F   GR  EA++L
Sbjct: 218 GTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQL 277

Query: 327 VNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           + +M +   I PDVVTY A++N F + G+  +A+++  +M   G  P+T++Y++ ++G C
Sbjct: 278 LQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFC 337

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
              +   A  M      +  +P+ IT++ ++ G  R  ++ +   ++ EM + G     +
Sbjct: 338 KQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 397

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               LI   C+ G ++ A+  +QE ++ G   NVV   +L+ G C  G L++AL +   M
Sbjct: 398 TYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 457

Query: 506 YLCKKD-----------PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
              K D           PD  TY  +I  L   G+  EA EL  +M  +G+VP  +TY +
Sbjct: 458 QKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNS 517

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           VIH  C+  R+++  ++ + M SK        +  +I   C  G +++  ++  ++ R  
Sbjct: 518 VIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 577

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
             A+A T   L+  +   G    A  +   M    + PD
Sbjct: 578 IVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPD 616



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 200/384 (52%), Gaps = 35/384 (9%)

Query: 185 AYSRAGKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
            +  +G+   A  +L  M+++  ++P+++  N  I+  V   K  +A    + M   GI 
Sbjct: 264 GFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 323

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+ +TY+ +I G+C  +R+  A  +   M  KGCSPD +++ T++   C+ KR+      
Sbjct: 324 PSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRV------ 377

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                            ++  +L+++M++ G + + +TYT +++GFC+VG+L+ A+ +LQ
Sbjct: 378 -----------------DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQ 420

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE-----------WWTPNAITY 412
           +M   G  PN V+    L+GLC NGK  +A EM    ++               P+  TY
Sbjct: 421 EMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTY 480

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           ++++ GL  EGK  EA ++  EM  +G  P  +  N +I  LC++ ++D A +      +
Sbjct: 481 NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGS 540

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           K  + NVV FT+LI G+C+ G +++ L L  +M       + +TY T+I    K G +  
Sbjct: 541 KSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNING 600

Query: 533 ATELMMKMLSKGLVPTVVTYRTVI 556
           A ++  +M++ G+ P  +T R ++
Sbjct: 601 ALDIFQEMMASGVYPDTITIRNML 624



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 241/500 (48%), Gaps = 56/500 (11%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F  LM    R G+L   + +   M+   V  N       +      +KL  AL    ++ 
Sbjct: 81  FCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKIT 140

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P V+T++ L+ G C   RI +A+ L  +M    C P+ V++ T+M  LC+E R+ 
Sbjct: 141 KLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVV 196

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
           E   L+++M+ D                       G  P+ +TY  +V+G C++G+   A
Sbjct: 197 EAVALLDRMLED-----------------------GLQPNQITYGTIVDGMCKMGDTVSA 233

Query: 359 KKMLQQMYH-HGCKPNTVSY-----TAFLNGLCHNGKSLEAREMINTS-EEEWWTPNAIT 411
             +L++M      KPN V +     T  +NG C +G+  EA++++    E +  +P+ +T
Sbjct: 234 LNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVT 293

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+ +++   +EGK  EA ++  EM+ +G  P+ +  + +I   C++ ++D A+       
Sbjct: 294 YNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMA 353

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            KGC+ +++ F +LI G+C+   +++ + LL +M       +T+TYTT+I    + G + 
Sbjct: 354 TKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLN 413

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIEN 591
            A +L+ +M+S G+ P VVT  T++   C  G+++D L++ + M   QK +      I+ 
Sbjct: 414 AAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM---QKSKMD----IDA 466

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              F  +E                D  T ++L+   +N+G  L A ++   M +R ++PD
Sbjct: 467 SHPFNGVE---------------PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 511

Query: 652 LKLCKKVSERLILEGKSEEA 671
                 V   L  + + +EA
Sbjct: 512 TITYNSVIHGLCKQSRLDEA 531



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 151/326 (46%), Gaps = 38/326 (11%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVL 199
           I Y  M++   K      A+ +  LMA +G  C P+   F+ L+  Y RA ++ + + +L
Sbjct: 327 ITYSSMIDGFCKQNRLDAAEHMFYLMATKG--CSPDIITFNTLIAGYCRAKRVDDGIKLL 384

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +A +  N +   T IH       L  A   L+ M  +G+ PNV+T N L+ G CD 
Sbjct: 385 HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDN 444

Query: 260 HRIKDAIKLIDEM-----------PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
            ++KDA+++   M           P  G  PD  +Y  ++  L  E              
Sbjct: 445 GKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINE-------------- 490

Query: 309 NDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                    G+  EA+EL  +M   G +PD +TY +V++G C+   LD+A +M   M   
Sbjct: 491 ---------GKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSK 541

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
              PN V++T  +NG C  G+  +  E+           NAITY  ++HG R+ G ++ A
Sbjct: 542 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGA 601

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSL 454
            D+ +EM+  G +P  + I  ++  L
Sbjct: 602 LDIFQEMMASGVYPDTITIRNMLTGL 627



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 190/373 (50%), Gaps = 26/373 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A+++L+ M  R  +  P+  +Y  L+ A+ + GK   A  +   M    + P+ +  ++ 
Sbjct: 274 AQQLLQEMLERK-KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSM 332

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I      N+L  A      M   G +P+++T+N LI GYC   R+ D IKL+ EM   G 
Sbjct: 333 IDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGL 392

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
             + ++Y T++   C+   +   +DL+++MV+              +   D G++++A E
Sbjct: 393 VANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALE 452

Query: 326 LVNQM--SQM---------GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
           +   M  S+M         G  PDV TY  +++G    G+  +A+++ ++M H G  P+T
Sbjct: 453 MFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 512

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           ++Y + ++GLC   +  EA +M ++   + ++PN +T++ +++G  + G++ +  ++  E
Sbjct: 513 ITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCE 572

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M ++G     +    LI    + G ++GA    QE +  G   + +   +++ G   K +
Sbjct: 573 MGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEE 632

Query: 495 LEEALSLLDDMYL 507
           L+ A+++L+D+ +
Sbjct: 633 LKRAVAMLEDLQM 645



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 172/403 (42%), Gaps = 50/403 (12%)

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           FH+   +E+A +L   M +   +P V+ +  ++    R+G LD    + ++M       N
Sbjct: 53  FHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCN 112

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             S+T  +   C   K   A        +  + P  +T+S ++HGL  E ++SEA D+  
Sbjct: 113 AYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFH 172

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF----------- 482
           +M K    P  V    L+  LCREG++  A   +   L  G   N + +           
Sbjct: 173 QMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 228

Query: 483 ------------------------------TSLIRGFCQKGDLEEALSLLDDMYLCKK-D 511
                                         T +I GFC  G   EA  LL +M   KK  
Sbjct: 229 DTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKIS 288

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD VTY  +I+A  K G+  EA EL  +ML +G++P+ +TY ++I  +C+  R+ D  + 
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRL-DAAEH 347

Query: 572 LEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           +  +++ + C      +N +I   C    +++  K+L ++      A+  T   L+  + 
Sbjct: 348 MFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFC 407

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
             G    A  +   M +  + P++  C  + + L   GK ++A
Sbjct: 408 QVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDA 450



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 121/293 (41%), Gaps = 60/293 (20%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ I +  +M  + R G+L     + R+M  +          +L++  C   K+  A   
Sbjct: 76  PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALST 135

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
             +    G    VV F++L+ G C +  + EAL L   M  CK  P+ VT+TT+++ L +
Sbjct: 136 FGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM--CK--PNVVTFTTLMNGLCR 191

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----------- 575
            GRV EA  L+ +ML  GL P  +TY T++   C++G     L LL KM           
Sbjct: 192 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVV 251

Query: 576 ---LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL-RTASKADASTCHVLVESYLNKG 631
              L ++ C      +I   CS G   EA ++L ++L R     D  T + L+ +++   
Sbjct: 252 IWPLERRTC------MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVK-- 303

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
                                            EGK  EA+ L    + RG I
Sbjct: 304 ---------------------------------EGKFFEAEELYDEMLPRGII 323



 Score = 46.2 bits (108), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 50/240 (20%), Positives = 91/240 (37%), Gaps = 43/240 (17%)

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM------- 540
           GF +   LE+A+ L  DM   +  P  + +  ++  + + GR++    L  KM       
Sbjct: 52  GFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPC 111

Query: 541 ---------------------------LSK-GLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
                                      ++K G  PTVVT+ T++H  C   R+ + L L 
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171

Query: 573 EKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
            +M         +  ++  LC  G + EA  +L ++L    + +  T   +V+     G 
Sbjct: 172 HQMCKPNV--VTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGD 229

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLIL------EGKSEEADTLMLRFVERGHIQP 686
            + A  +  +M   + I    +   +  R  +       G+  EA  L+   +ER  I P
Sbjct: 230 TVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISP 289



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/136 (19%), Positives = 58/136 (42%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  ++  L K      A ++   M  +        F+ L+  Y +AG++ + + + 
Sbjct: 511 DTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 570

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  +  N +   T IH       +  AL   + M  +G+ P+ +T   ++ G    
Sbjct: 571 CEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSK 630

Query: 260 HRIKDAIKLIDEMPLK 275
             +K A+ +++++ + 
Sbjct: 631 EELKRAVAMLEDLQMS 646


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 240/506 (47%), Gaps = 14/506 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  V   +AR GIE      + ++ A  +  K+ +    L  M++  +  +++  NT I+
Sbjct: 169 AWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLIN 228

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  L +A   +  M   G+ P + TYN +I G C   R   A  + +EM   G SP
Sbjct: 229 AYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSP 288

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLF---HDQGRIEEAKELV 327
           D  +Y T++   C+     E +D+   M         ++ S+L       G +++A    
Sbjct: 289 DTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYF 348

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
             M   G +PD V YT ++NG+CR G + +A ++  +M   GC  + V+Y   LNGLC  
Sbjct: 349 RDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKK 408

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
               +A  + +   E    P+  T++ ++HG  +EG + +A  +   M +K   P  V  
Sbjct: 409 KLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTY 468

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N+LI   C+  +M+ A +   E +++    N +++  L+ G+C  G + EA  L D+M  
Sbjct: 469 NILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIR 528

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P  VT  T+I    ++G + +A E + KM+S+G+ P  +TY T+I+ + +   ++ 
Sbjct: 529 KGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDK 588

Query: 568 LLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
              L+ KM +K  Q     YN ++   C  G ++EA  IL K++      D ST   L+ 
Sbjct: 589 AFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLIN 648

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPD 651
            Y+++     A++    M  R  +PD
Sbjct: 649 GYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 136/549 (24%), Positives = 260/549 (47%), Gaps = 26/549 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D +V+ +++    + +         +++ R+G      A + L+    + G +  A  V 
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + + ++ +  N+   N  ++ L   +K+     FL  M+  GI  +++TYN LI  YC  
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             + +A ++++ M  KG  P   +Y  V+  LCK                       +GR
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCK-----------------------KGR 270

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
              AK + N+M  +G  PD  TY  ++   CR     +AK +   M H G  P+ +S+++
Sbjct: 271 YVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSS 330

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +     NG   +A       +     P+ + Y+++++G  R G +SEA ++  +M+++G
Sbjct: 331 LIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
                V  N ++  LC++  +  A     E + +G   +   FT+LI G C++G++ +AL
Sbjct: 391 CALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKAL 450

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
           SL   M      PD VTY  +ID   K   +E+A EL  +M+S+ + P  ++Y  +++ Y
Sbjct: 451 SLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGY 510

Query: 560 CQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C +G V +  +L ++M+ K  +      N VI+  C  G L +A + LGK++      D+
Sbjct: 511 CNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDS 570

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLR 677
            T + L+  ++       A+ +  +M  + L PD+     +      +G+ +EA+ ++ +
Sbjct: 571 ITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRK 630

Query: 678 FVERGHIQP 686
            +ERG I P
Sbjct: 631 MIERG-IDP 638



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 240/510 (47%), Gaps = 23/510 (4%)

Query: 130 WADRQWRYRHDPI-------VYYM--MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
           W D  W   ++         VY +  M+  L K       K  L  M ++GI      ++
Sbjct: 165 WVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYN 224

Query: 181 YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
            L+ AY R G L  A  V++ M    + P L   N  I+ L    +  +A      M   
Sbjct: 225 TLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSI 284

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G++P+  TYN L+   C  +   +A  +  +M  +G SPD +S+ +++G   +   + + 
Sbjct: 285 GLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQA 344

Query: 301 ----RDLMEKMVNDSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
               RD+    +   N+ +          G + EA E+ ++M + GC  DVV Y  ++NG
Sbjct: 345 LMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNG 404

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
            C+   L  A  +  +M   G  P+  ++T  ++G C  G   +A  +     ++   P+
Sbjct: 405 LCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPD 464

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
            +TY++++ G  +  ++ +A ++  EM+ +  FP  +   +L+   C  G +  A +   
Sbjct: 465 IVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWD 524

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E + KG    +V   ++I+G+C+ GDL +A   L  M      PD++TY T+I+   K  
Sbjct: 525 EMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGE 584

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYN 586
            +++A  L+ KM +KGL P VVTY  +++ +C+ GR+++   +L KM+ +     R+ Y 
Sbjct: 585 YMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYT 644

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            +I    S   L+EA +   ++L+     D
Sbjct: 645 TLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/437 (22%), Positives = 185/437 (42%), Gaps = 52/437 (11%)

Query: 270 DEMPLKGCSPDKVSYYTVMGYL--CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELV 327
           ++ P     PD      ++  L   + KR+ + + L+ +M+  S +     R+E  + L+
Sbjct: 50  NQEPTSSAPPDSFLVEKILLNLRRVRSKRLSDAQTLILRMIRRSGV----SRVEIVESLI 105

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           +  S  G   D + +  ++  + +  +L++     + +   G   +  +  + L GL   
Sbjct: 106 SMSSTCGV--DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKM 163

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G    A E+ N         N  T +++++ L ++ K+ +    + +M +KG F   V  
Sbjct: 164 GWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTY 223

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N LI + CREG +  A + M     KG    +  + ++I G C+KG    A  + ++M  
Sbjct: 224 NTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLS 283

Query: 508 CKKDPDTVTYTT-----------------------------------IIDALSKNGRVEE 532
               PDT TY T                                   +I   S+NG +++
Sbjct: 284 IGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQ 343

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVI 589
           A      M + GLVP  V Y  +I+ YC+ G + + L++ +KML +Q C     AYN ++
Sbjct: 344 ALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML-EQGCALDVVAYNTIL 402

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
             LC    L +A  +  +++      D  T   L+  +  +G    A  +   M  +N+ 
Sbjct: 403 NGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIK 462

Query: 650 PDLKLCKKVSERLILEG 666
           PD+     V+  ++++G
Sbjct: 463 PDI-----VTYNILIDG 474


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 230/469 (49%), Gaps = 27/469 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI      +S L+  + R  +L  A+ VL+ M K    P+++  N+ ++    GN+
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           ++ A+  + +M   G  P+  T+N LI G    +R  +A+ L+D M +KGC PD V+Y  
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           V+  LCK   I     L++KM        +QG+IE               P VV Y  ++
Sbjct: 227 VVNGLCKRGDIDLALSLLKKM--------EQGKIE---------------PGVVIYNTII 263

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C    ++ A  +  +M + G +PN V+Y + +  LC+ G+  +A  +++   E    
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN +T+S ++    +EGKL EA  +  EM+K+   P     + LI   C   ++D AK  
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +  ++K C  NVV + +LI+GFC+   ++E + L  +M       +TVTYTT+I    +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--- 583
               + A  +  +M+S G++P ++TY  ++   C  G+VE  L + E  L + K      
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE-YLQRSKMEPDIY 502

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
            YN +IE +C  G +E+   +   +     K +  T   ++  +  KG+
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 247/515 (47%), Gaps = 26/515 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS L+ A ++  K    + +   MQ   ++ NL   +  I+     ++L+ AL  L +M 
Sbjct: 84  FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+++T N L+ G+C  +RI DA+ L+ +M   G  PD  ++ T++  L +     
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR----- 198

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                               R  EA  LV++M   GC PD+VTY  VVNG C+ G++D A
Sbjct: 199 ------------------HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L++M     +P  V Y   ++ LC+     +A  +    + +   PN +TY+ ++  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L   G+ S+A  ++ +M+++   P  V  + LI +  +EGK+  A+K   E + +    +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +  ++SLI GFC    L+EA  + + M      P+ VTY T+I    K  RV+E  EL  
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFG 596
           +M  +GLV   VTY T+IH + Q    ++   + ++M+S         Y+ +++ LC+ G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            +E A  +   + R+  + D  T ++++E     G     + + C +  + + P++    
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
            +      +G  EEAD L     E G + P S  +
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTY 574



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 219/449 (48%), Gaps = 12/449 (2%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           H+   Y +++    +      A  VL  M + G E      + L+  +    ++ +A+ +
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +  M +    P+    NT IH L   N+ ++A+  ++RM + G  P+++TY  ++ G C 
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
              I  A+ L+ +M      P  V Y T++  LC  K + +  +L  +M N         
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                    + GR  +A  L++ M +    P+VVT++A+++ F + G+L +A+K+  +M 
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                P+  +Y++ +NG C + +  EA+ M      +   PN +TY+ ++ G  +  ++ 
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           E  ++ REM ++G     V    LI    +  + D A+   ++ ++ G   +++ ++ L+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C  G +E AL + + +   K +PD  TY  +I+ + K G+VE+  +L   +  KG+ 
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           P VVTY T++  +C+ G  E+   L  +M
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREM 562



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 209/448 (46%), Gaps = 30/448 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           Y+ D   +  ++  L +      A  ++  M  +G  C+P+  +Y +V     + G +  
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG--CQPDLVTYGIVVNGLCKRGDIDL 239

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +L  M++  + P ++I NT I  L     +  AL     M   GI PNV+TYN LI+
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
             C+  R  DA +L+ +M  +  +P+ V++  ++    KE                    
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE-------------------- 339

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G++ EA++L ++M +    PD+ TY++++NGFC    LD+AK M + M    C PN 
Sbjct: 340 ---GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y   + G C   +  E  E+     +     N +TY+ ++HG  +  +   A  V ++
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MV  G  P  +  ++L+  LC  GK++ A    +         ++  +  +I G C+ G 
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           +E+   L   + L    P+ VTYTT++    + G  EEA  L  +M  +G +P   TY T
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
           +I  + + G      +L+ +M S   CR
Sbjct: 577 LIRAHLRDGDKAASAELIREMRS---CR 601



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 169/357 (47%), Gaps = 16/357 (4%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           AL  F   D +   R + + Y  ++  L        A R+L  M  R I      FS L+
Sbjct: 275 ALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
            A+ + GKL  A  +   M K ++ P++   ++ I+   + ++L +A    E M      
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           PNV+TYN LIKG+C   R+ + ++L  EM  +G   + V+Y T++    + +     + +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453

Query: 304 MEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
            ++MV+D  L              + G++E A  +   + +    PD+ TY  ++ G C+
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            G+++    +   +   G KPN V+YT  ++G C  G   EA  +    +EE   P++ T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
           Y+ ++    R+G  + + +++REM    F      I  L+ ++  +G++D  K F++
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLD--KSFLK 627



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 2/301 (0%)

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           +LD A  +   M      P+ V ++  L+ +    K      +    +    + N  TYS
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           ++++   R  +LS A  V+ +M+K G+ P  V +N L+   C   ++  A   + + +  
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   +   F +LI G  +     EA++L+D M +    PD VTY  +++ L K G ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIEN 591
             L+ KM    + P VV Y T+I   C    V D L L  +M +K  +     YN +I  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC++G   +A ++L  ++      +  T   L+++++ +G  + A K+   M  R++ PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 652 L 652
           +
Sbjct: 361 I 361


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 242/517 (46%), Gaps = 32/517 (6%)

Query: 87  LRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFY---WADRQWRYRHDPIV 143
           + +A +  L   LR LL S KP     ++            F    W      +RH    
Sbjct: 44  INNAQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQS 103

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARR-----------------GIECRPEAFSYLMVAY 186
           Y  M   LS  ++ Q  + ++R +  R                 G  C    F  LM+AY
Sbjct: 104 YCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAY 163

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
             +G + +A+    +++ +        C   +  ++  N       F   +   G  P V
Sbjct: 164 WDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKV 223

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
             YN LI  +C    I+DA  + +E+  +G  P  VS+ T++  LCK + + E   L + 
Sbjct: 224 QYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKT 283

Query: 307 MVND---------SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
           M  +         S L H    +GR++ A++L ++M Q G  P+ +T+TA+++G  R   
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRR 343

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           +D A     QM   G KP+ V Y   LNGLC  G   +AR++++  +     P+ ITY+ 
Sbjct: 344 MDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTT 403

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ G  +EG L  A ++ + M ++G     V    LI   CR+G++  A++ ++E +  G
Sbjct: 404 LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAG 463

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              +   +T +I G+C+KG+++    LL +M +    P  +TY  +++ L K G+++ A 
Sbjct: 464 MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNAN 523

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
            L+  ML+ G+ P  +TY  ++  +C+ G+ EDLLKL
Sbjct: 524 MLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 220/483 (45%), Gaps = 47/483 (9%)

Query: 214 CNTAIHVLVV-GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID-- 270
           C + I  LV    K + A  F   +  AG   +   ++ L+  Y D   + DAI+     
Sbjct: 120 CQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLV 179

Query: 271 -----EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
                ++P  GC           GYL            ++KM+N ++             
Sbjct: 180 RNSNFQIPFHGC-----------GYL------------LDKMINSNSPV-------TIWT 209

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
             +++ + G  P V  Y  ++N FC+ G +  AK +  ++   G +P TVS+   +NGLC
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            +    E   +  T EE    P+  TYSV++HGL +EG+L  A  +  EM ++G  P  +
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               LI    R  +MD A     + L  G   ++V + +L+ G C+ GD+ +A  L+D+M
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
            +    PD +TYTT+ID   K G +E A E+   M  +G+V   V +  +I  +C+ GRV
Sbjct: 390 KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449

Query: 566 EDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
            D  + L +M+    +     Y  VI+  C  G ++   K+L ++     K    T +VL
Sbjct: 450 RDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVL 509

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG--KSEEADTLMLRFVER 681
           +     +G    A  +   M N  + PD      ++  ++LEG  K+ +A+ L+    E+
Sbjct: 510 MNGLCKQGQMKNANMLLEAMLNLGVTPD-----DITYNILLEGHCKNGKAEDLLKLRNEK 564

Query: 682 GHI 684
           G I
Sbjct: 565 GLI 567



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 8/151 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + +  ++    +    + A+R LR M   G+  +P+  +Y MV   Y + G ++    
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAGM--KPDDATYTMVIDGYCKKGNVKMGFK 489

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  MQ     P ++  N  ++ L    ++  A   LE M   G+TP+ +TYN L++G+C
Sbjct: 490 LLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHC 549

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
              + +D +KL +E   KG   D  +YYT +
Sbjct: 550 KNGKAEDLLKLRNE---KGLIVD-YAYYTSL 576


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 238/509 (46%), Gaps = 14/509 (2%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           Q R    PI +  +   +++TK         + M   GIE      + ++  Y R  KL 
Sbjct: 92  QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLL 151

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  VL    K    P+ +  +T ++   +  ++++A+  ++RM      P+++T + LI
Sbjct: 152 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI 211

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------ 307
            G C   R+ +A+ LID M   G  PD+V+Y  V+  LCK        DL  KM      
Sbjct: 212 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 271

Query: 308 --VNDSNLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
             V   ++  D     G  ++A  L N+M   G   DVVTY++++ G C  G+ D   KM
Sbjct: 272 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 331

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L++M      P+ V+++A ++     GK LEA+E+ N        P+ ITY+ ++ G  +
Sbjct: 332 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 391

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           E  L EA  +   MV KG  P  V  ++LI S C+  ++D   +  +E  +KG   N + 
Sbjct: 392 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 451

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           + +L+ GFCQ G L  A  L  +M      P  VTY  ++D L  NG + +A E+  KM 
Sbjct: 452 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 511

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLE 599
              +   +  Y  +IH  C   +V+D   L   +  K  +     YN +I  LC  G L 
Sbjct: 512 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 571

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYL 628
           EA  +  K+       D  T ++L+ ++L
Sbjct: 572 EADMLFRKMKEDGCTPDDFTYNILIRAHL 600



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 246/506 (48%), Gaps = 14/506 (2%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           K+ +A+ +   M ++   P  +  N     +    +    L F + M+L GI  ++ T  
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-- 308
            +I  YC   ++  A  ++      G  PD +++ T++   C E R+ E   L+++MV  
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 309 -------NDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                    S L +    +GR+ EA  L+++M + G  PD VTY  V+N  C+ G    A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             + ++M     K + V Y+  ++ LC +G   +A  + N  E +    + +TYS ++ G
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L  +GK  +   ++REM+ +   P  V  + LI    +EGK+  AK+   E + +G A +
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            + + SLI GFC++  L EA  + D M     +PD VTY+ +I++  K  RV++   L  
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 438

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
           ++ SKGL+P  +TY T++  +CQ G++    +L ++M+S+        Y  +++ LC  G
Sbjct: 439 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 498

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            L +A +I  K+ ++         ++++    N      A+ + C + ++ + PD+    
Sbjct: 499 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 558

Query: 657 KVSERLILEGKSEEADTLMLRFVERG 682
            +   L  +G   EAD L  +  E G
Sbjct: 559 VMIGGLCKKGSLSEADMLFRKMKEDG 584



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 181/382 (47%), Gaps = 23/382 (6%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y ++++ L K      A  +   M  +GI+     +S L+      GK  +   +L  M 
Sbjct: 277 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 336

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
              + P+++  +  I V V   KL +A      M   GI P+ +TYN LI G+C  + + 
Sbjct: 337 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 396

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
           +A ++ D M  KGC PD V+Y  ++   CK KR+                       ++ 
Sbjct: 397 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV-----------------------DDG 433

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
             L  ++S  G IP+ +TY  +V GFC+ G+L+ AK++ Q+M   G  P+ V+Y   L+G
Sbjct: 434 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 493

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           LC NG+  +A E+    ++   T     Y++++HG+    K+ +A  +   +  KG  P 
Sbjct: 494 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 553

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V  N++I  LC++G +  A    ++    GC  +   +  LIR       L  ++ L++
Sbjct: 554 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 613

Query: 504 DMYLCKKDPDTVTYTTIIDALS 525
           +M +C    D+ T   +ID LS
Sbjct: 614 EMKVCGFSADSSTIKMVIDMLS 635



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/164 (21%), Positives = 71/164 (43%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y ++L+ L        A  +   M +  +      ++ ++     A K+ +A  +   
Sbjct: 485 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 544

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           +    V P+++  N  I  L     L++A     +M+  G TP+  TYN LI+ +     
Sbjct: 545 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 604

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           +  +++LI+EM + G S D  +   V+  L   +  K   D++ 
Sbjct: 605 LISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDMLS 648


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 238/510 (46%), Gaps = 14/510 (2%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           Q R    PI +  +   +++TK         + M   GIE      + ++  Y R  KL 
Sbjct: 63  QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLL 122

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  VL    K    P+ +  +T ++   +  ++++A+  ++RM      P+++T + LI
Sbjct: 123 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI 182

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------ 307
            G C   R+ +A+ LID M   G  PD+V+Y  V+  LCK        DL  KM      
Sbjct: 183 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 242

Query: 308 --VNDSNLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
             V   ++  D     G  ++A  L N+M   G   DVVTY++++ G C  G+ D   KM
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L++M      P+ V+++A ++     GK LEA+E+ N        P+ ITY+ ++ G  +
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           E  L EA  +   MV KG  P  V  ++LI S C+  ++D   +  +E  +KG   N + 
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           + +L+ GFCQ G L  A  L  +M      P  VTY  ++D L  NG + +A E+  KM 
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLE 599
              +   +  Y  +IH  C   +V+D   L   +  K  +     YN +I  LC  G L 
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLN 629
           EA  +  K+       D  T ++L+ ++L 
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRAHLG 572



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 246/506 (48%), Gaps = 14/506 (2%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           K+ +A+ +   M ++   P  +  N     +    +    L F + M+L GI  ++ T  
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-- 308
            +I  YC   ++  A  ++      G  PD +++ T++   C E R+ E   L+++MV  
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 309 -------NDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                    S L +    +GR+ EA  L+++M + G  PD VTY  V+N  C+ G    A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             + ++M     K + V Y+  ++ LC +G   +A  + N  E +    + +TYS ++ G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L  +GK  +   ++REM+ +   P  V  + LI    +EGK+  AK+   E + +G A +
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            + + SLI GFC++  L EA  + D M     +PD VTY+ +I++  K  RV++   L  
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
           ++ SKGL+P  +TY T++  +CQ G++    +L ++M+S+        Y  +++ LC  G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            L +A +I  K+ ++         ++++    N      A+ + C + ++ + PD+    
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529

Query: 657 KVSERLILEGKSEEADTLMLRFVERG 682
            +   L  +G   EAD L  +  E G
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDG 555



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 181/382 (47%), Gaps = 23/382 (6%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y ++++ L K      A  +   M  +GI+     +S L+      GK  +   +L  M 
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
              + P+++  +  I V V   KL +A      M   GI P+ +TYN LI G+C  + + 
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
           +A ++ D M  KGC PD V+Y  ++   CK KR+                       ++ 
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV-----------------------DDG 404

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
             L  ++S  G IP+ +TY  +V GFC+ G+L+ AK++ Q+M   G  P+ V+Y   L+G
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           LC NG+  +A E+    ++   T     Y++++HG+    K+ +A  +   +  KG  P 
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V  N++I  LC++G +  A    ++    GC  +   +  LIR       L  ++ L++
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584

Query: 504 DMYLCKKDPDTVTYTTIIDALS 525
           +M +C    D+ T   +ID LS
Sbjct: 585 EMKVCGFSADSSTIKMVIDMLS 606



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 35/164 (21%), Positives = 71/164 (43%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y ++L+ L        A  +   M +  +      ++ ++     A K+ +A  +   
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           +    V P+++  N  I  L     L++A     +M+  G TP+  TYN LI+ +     
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           +  +++LI+EM + G S D  +   V+  L   +  K   D++ 
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDMLS 619


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 157/580 (27%), Positives = 267/580 (46%), Gaps = 41/580 (7%)

Query: 95  LEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKT 154
           +E  L+ +   ++   I +VL+ Q D R+  + F W+ + W  R    V  +++  L K 
Sbjct: 48  MEDGLKVISSRIRSYTITSVLQEQPDTRLGFRLFIWSLKSWHLRCR-TVQDLIIGKLIKE 106

Query: 155 KLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
              +   +VL+ +    I+   EAFS L+ AYS AG    A+   S+M+     P+L   
Sbjct: 107 NAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAF 166

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N  +H LV       AL    +M    + P+V+TY  LI G C   + +DA+ L DEM  
Sbjct: 167 NLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTD 226

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
           +G  P+++ Y  V+  LC+ K+I +                       A+ L ++M   G
Sbjct: 227 RGILPNQIIYSIVLSGLCQAKKIFD-----------------------AQRLFSKMRASG 263

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C  D++TY  ++NGFC+ G LD A  +LQ +   G     + Y   +NGL    +  EA 
Sbjct: 264 CNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAH 323

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
                   E   P+ + Y++++ GL +EG+++EA  ++ EM ++G  P  +  N LI+  
Sbjct: 324 MWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGF 383

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C  G +D A+    E     C  N   ++ LI G C+ G + +A  +  +M      P  
Sbjct: 384 CDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSV 443

Query: 515 VTYTTIIDALSKNGRVEEATELMMKM-----------LSKGL--VPTVVTYRTVIHRYCQ 561
           VT+ ++I+ L K  R+EEA  L  +M           LS+G   V  + + + ++ R C+
Sbjct: 444 VTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCE 503

Query: 562 VGRVEDLLKLLEKMLSK---QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
            G +    KLL +++        RT YN +I   C FG +  A K+  ++       D+ 
Sbjct: 504 SGMILKAYKLLMQLVDSGVLPDIRT-YNILINGFCKFGNINGAFKLFKEMQLKGHMPDSV 562

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           T   L++     G    A ++  +M  +  +P+    K +
Sbjct: 563 TYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTI 602



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 132/326 (40%), Gaps = 39/326 (11%)

Query: 142 IVYYMMLEILSKT----KLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           +++Y M EI+ K     +L QG  +V  +           +   +M     +G +  A  
Sbjct: 464 LLFYQM-EIVRKPSLFLRLSQGTDKVFDI----------ASLQVMMERLCESGMILKAYK 512

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  +  + V P++   N  I+       +  A +  + MQL G  P+ +TY  LI G  
Sbjct: 513 LLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLY 572

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              R +DA+++ ++M  KGC P+  +Y T+M + C+E  I     +  K + D   + D+
Sbjct: 573 RAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDE 632

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
                A+   N+                        EL  A + L +M       +   Y
Sbjct: 633 KVRVVAESFDNE------------------------ELQTAIRRLLEMDIKSKNFDLAPY 668

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T FL GL    +  EA  + +  ++     ++ +  +++  L     L  A DV    ++
Sbjct: 669 TIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLE 728

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGA 463
           +GF   P   N L+ +L    + D A
Sbjct: 729 RGFRLMPPICNQLLCNLLHLDRKDDA 754


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/533 (27%), Positives = 254/533 (47%), Gaps = 67/533 (12%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D   Y  ++  L K +  +  + ++  M   G      A S L+    + G + +A  
Sbjct: 282 RADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFD 341

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +++ ++K  VAP+L + N  I+ +    KL +A      M   G+ PN +TY+ LI  +C
Sbjct: 342 LVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFC 401

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              ++  A+  + +M   G       Y +++   CK                        
Sbjct: 402 KRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCK-----------------------L 438

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G++  AK L ++M   G  P+VV YT++++G+C+ GEL  A ++  +M   G  PNT ++
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTF 498

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           TA ++GLCH  +  EA ++     E    PN +TY+V++ G  +EG    A +++ EMV+
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE 558

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFM------QECLN--KGCAVNVVNFTSLIRGF 489
           KG  P       LI  LC  G++  A++FM      Q+ LN  +GC  NVV +T+LI G 
Sbjct: 559 KGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGL 618

Query: 490 CQKGDLEEALSLLDDM-----------YLCKKD-----------------------PDTV 515
           C+ G +++A  L  +M           Y C  D                        +TV
Sbjct: 619 CKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTV 678

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY  +I    K GR++EA E+++ M+  G+ P  ++Y T+I+ YC+ G +++ +KL E M
Sbjct: 679 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 738

Query: 576 LSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           L++       AYN +I   C  G L +A ++   ++R   K + +T + L+  
Sbjct: 739 LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 229/491 (46%), Gaps = 22/491 (4%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           V+RLM   GI  +    S ++    R  + R A+++   +  + + P++ +    +  L 
Sbjct: 167 VVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLC 226

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
                 +A   + RM+ +G   +V TYN  I+G C   R+ +A+++ + +  KG   D  
Sbjct: 227 ELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVG 286

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNL---FHDQGRIEEAKELVNQM 330
           +Y T++  LCK +  +   ++M +M+           SNL      +G I  A +LVN++
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV 346

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            + G  P +  Y A++N  C+ G+LD+A+ +   M H G  PN V+Y+  ++  C  GK 
Sbjct: 347 KKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKL 406

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             A   +    E         YS ++ G  + GKL  A  +  EM+  G  P  V    L
Sbjct: 407 DVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL 466

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I   C+EG++  A +   E   KG + N   FT+LI G C    + EA  L  +M     
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV 526

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P+ VTY  +I+   K G    A EL+ +M+ KGLVP   TYR +I   C  GRV +  +
Sbjct: 527 IPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEARE 586

Query: 571 LLEKMLSKQK-------CR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
            +  +  +Q+       C      Y  +I  LC  G +++A  +  ++L + S  + +T 
Sbjct: 587 FMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTY 646

Query: 621 HVLVESYLNKG 631
              ++   ++G
Sbjct: 647 ACFLDYLTSEG 657



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 214/443 (48%), Gaps = 27/443 (6%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P  F Y  L+ +  + GKL  A  + + M    + PN +  +  I       KL  AL F
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           L +M   GI   V  Y+ LI G+C L +++ A  L DEM   G  P+ V Y +++   CK
Sbjct: 413 LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCK 472

Query: 294 EKRIKEVRDLMEKMVND-------------SNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
           E  +     L  +M                S L H   R+ EA +L  +M +   IP+ V
Sbjct: 473 EGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH-ANRMAEANKLFGEMVEWNVIPNEV 531

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT- 399
           TY  ++ G C+ G   +A ++L +M   G  P+T +Y   ++GLC  G+  EARE +N  
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591

Query: 400 -------SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
                  +E E   PN +TY+ +++GL + G + +A  + REM+     P        + 
Sbjct: 592 QGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLD 651

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            L  EG ++ A + + + L +G   N V +  LIRGFC+ G ++EA  +L +M      P
Sbjct: 652 YLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISP 710

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D ++Y+TII    + G ++EA +L   ML++G+ P  V Y  +I+  C  G +    +L 
Sbjct: 711 DCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELR 770

Query: 573 EKMLSK--QKCRTAYNQVIENLC 593
           + M+ +  +  R  YN +I   C
Sbjct: 771 DDMMRRGVKPNRATYNSLIHGTC 793



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 219/450 (48%), Gaps = 29/450 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
            VY  ++  + K      A+ +   M  +G+      +S L+ ++ + GKL  A++ L  
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  +   +   ++ I       KL  A    + M   G+ PNV+ Y  LI GYC    
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD----- 316
           + +A +L  EM  KG SP+  ++  ++  LC   R+ E   L  +MV  + + ++     
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNV 535

Query: 317 -------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH- 368
                  +G    A EL+++M + G +PD  TY  +++G C  G + +A++ +  +    
Sbjct: 536 LIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQ 595

Query: 369 -------GCKPNTVSYTAFLNGLCHNG----KSLEAREMINTSEEEWWTPNAITYSVVMH 417
                  GC PN V+YTA +NGLC  G      L  REM+ ++      PN  TY+  + 
Sbjct: 596 QKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNS----LPNQNTYACFLD 651

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
            L  EG + +A  +  +++ +GF    V  N+LI+  C+ G++  A + +   ++ G + 
Sbjct: 652 YLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISP 710

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           + ++++++I  +C++GDL+EA+ L + M     +PDTV Y  +I      G + +A EL 
Sbjct: 711 DCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELR 770

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
             M+ +G+ P   TY ++IH  C +  V  
Sbjct: 771 DDMMRRGVKPNRATYNSLIHGTCLMSSVSS 800



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 179/367 (48%), Gaps = 12/367 (3%)

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A  L +++   G  PDV  YTAVV   C + +  +A++++ +M   GC  +  +Y  F+ 
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC N +  EA E+ N    +    +  TY  ++ GL +  +     +++ EM++ GF P
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVP 318

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
           +   ++ L+  L ++G +  A   + +    G A ++  + +LI   C+ G L+EA SL 
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF 378

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           ++M      P+ VTY+ +ID+  K G+++ A   + KM   G+  TV  Y ++I  +C++
Sbjct: 379 NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKL 438

Query: 563 GRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           G++     L ++M++   +     Y  +I   C  G L  A ++  ++       +  T 
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTF 498

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT-----LM 675
             L+    +      A K+   M   N+IP+     +V+  +++EG  +E +T     L+
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWNVIPN-----EVTYNVLIEGHCKEGNTVRAFELL 553

Query: 676 LRFVERG 682
              VE+G
Sbjct: 554 DEMVEKG 560



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 160/370 (43%), Gaps = 56/370 (15%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           + AK +   M   G++     ++ L+  Y + G+L NA  +   M    ++PN       
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTAL 501

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I  L   N++A+A +    M    + PN +TYN LI+G+C       A +L+DEM  KG 
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRD----------------------------------- 302
            PD  +Y  ++  LC   R+ E R+                                   
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKI 621

Query: 303 -LMEK-------MVNDSNL--------FHD----QGRIEEAKELVNQMSQMGCIPDVVTY 342
            LM+K       M+  ++L        F D    +G IE+A +L + + + G + + VTY
Sbjct: 622 GLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTY 680

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             ++ GFC++G + +A ++L  M   G  P+ +SY+  +   C  G   EA ++  +   
Sbjct: 681 NILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLN 740

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               P+ + Y+ +++G    G+L++A ++  +M+++G  P     N LI   C    +  
Sbjct: 741 RGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSS 800

Query: 463 AKKFMQECLN 472
              +    LN
Sbjct: 801 TADYFSCKLN 810


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 207/454 (45%), Gaps = 23/454 (5%)

Query: 125 LQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV 184
           + FF WA  Q  Y H  + Y  +LE+L+K+  C         M   G       + YL+ 
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLR 60

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
           +  +A +   A  V   M     +PN+   +  I  L  G K+ +A   L  M   G  P
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           NV+TY  L+ G C + ++K+A+ L   M  +GC PD V Y  ++                
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLI---------------- 164

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  + F  +G + EA  L  +M + GCIP V TY ++++GF R GE  + + + + 
Sbjct: 165 -------DGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKD 217

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   GC PN  ++   L+G C  G  +EA  +          P+ ++Y+ +M G+  +GK
Sbjct: 218 MLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGK 277

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             EA  ++REM++ G  P  V  N+LI    + G +D A K   E    G   +  ++++
Sbjct: 278 PHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYST 337

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +I   C+ G +  A  +  DM      PD      ++  L +  R+ E+ EL   M+   
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE 397

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            VP +  Y  ++++ C+  R +D+ ++  ++  +
Sbjct: 398 CVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTER 431



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 188/382 (49%), Gaps = 25/382 (6%)

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
             L+YN L++      R        ++M   GC P+  +Y  ++  LC+ +R        
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRF------- 68

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                           EEA+ +   M+  GC P+V +Y+ ++ G CR  ++D+A ++L +
Sbjct: 69  ----------------EEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNE 112

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G +PN V+Y + L+GLC  GK  EA ++ +        P+ + Y+V++ G  ++G 
Sbjct: 113 MIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGD 172

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + EA  +  EM++KG  PT    N L+    R+G+    +   ++ L +GC  N+  F +
Sbjct: 173 MGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN 232

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L+ GFC+ GD+ EA  L  +M      PD V+Y T++  +   G+  EA  L+ +M+  G
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSG 292

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAG 602
           + P +V+Y  +I  Y + G ++  +KL  ++     +    +Y+ +I+ LC  G +  A 
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352

Query: 603 KILGKVLRTASKADASTCHVLV 624
            +   ++   S  DA+    LV
Sbjct: 353 VVFKDMIANGSAPDAAVVIPLV 374



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 158/346 (45%), Gaps = 2/346 (0%)

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            ++Y  ++    + G  D        M   GC PNT +Y   L  LC   +  EAR +  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
               +  +PN  +YS+++ GL R  K+ EA +++ EM+  G  P  V    L+  LC+ G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           K+  A       + +GC  + V +  LI GF +KGD+ EA  L ++M      P   TY 
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--L 576
           +++   S+ G       L   ML +G VP + T+  ++  +C++G + +  +L  +M  L
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 577 SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
                  +YN ++  +CS G   EA ++L +++R+    D  + ++L++ Y   G    A
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            K+   +    L PD      + + L   GK   A  +    +  G
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 150/329 (45%), Gaps = 19/329 (5%)

Query: 139 HDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           H P  + Y  +L  L K    + A  +   M  RG  C P+   Y  L+  +S+ G +  
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG--CPPDGVVYNVLIDGFSKKGDMGE 175

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +   M +    P +   N+ +       +  +     + M   G  PN+ T+N L+ 
Sbjct: 176 AYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLD 235

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
           G+C +  + +A +L  EM   GC PD VSY T+M  +C + +  E + L+ +M+      
Sbjct: 236 GFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGP 295

Query: 312 -----NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                N+  D     G ++ A +L  ++ + G  PD  +Y+ +++  CR G++  A  + 
Sbjct: 296 DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF 355

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           + M  +G  P+       + GLC   +  E+ E+     +    P    Y+++M+ L + 
Sbjct: 356 KDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKA 415

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLI 451
            +  + C++  E+ ++GF P  VEI+ +I
Sbjct: 416 KRSDDVCEIFHELTERGFSPD-VEISKVI 443



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 4/174 (2%)

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
           T++Y  +++ L+K+GR +        ML  G VP   TY  ++   CQ  R E+   +  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 574 KMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
            M + Q C     +Y+ +I  LC    ++EA ++L +++    + +  T   L+      
Sbjct: 77  GM-AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           G    A  +  RM  R   PD  +   + +    +G   EA  L    +E+G I
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/566 (27%), Positives = 267/566 (47%), Gaps = 25/566 (4%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR 165
           L P+ + AV++ Q D   AL+ F    ++  ++H    Y  ++E L      +  + VL 
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64

Query: 166 LMARR-GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
            M    G       +   M  Y R GK++ A+ V   M      P +   N  + VLV  
Sbjct: 65  DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS 124

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
               +A +   RM+  GITP+V ++   +K +C   R   A++L++ M  +GC  + V+Y
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY 184

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
            TV+G   +E    E  +L  KM+                +   +G ++E ++L++++ +
Sbjct: 185 CTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK 244

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G +P++ TY   + G C+ GELD A +M+  +   G KP+ ++Y   + GLC N K  E
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A   +     E   P++ TY+ ++ G  + G +  A  +V + V  GF P       LI 
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC EG+ + A     E L KG   NV+ + +LI+G   +G + EA  L ++M      P
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIP 424

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           +  T+  +++ L K G V +A  L+  M+SKG  P + T+  +IH Y    ++E+ L++L
Sbjct: 425 EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL 484

Query: 573 EKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY--- 627
           + ML          YN ++  LC     E+  +    ++      +  T ++L+ES    
Sbjct: 485 DVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544

Query: 628 --LNKGIPLLAYKVACRMFNRNLIPD 651
             L++ + LL       M N+++ PD
Sbjct: 545 RKLDEALGLLE-----EMKNKSVNPD 565



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/561 (25%), Positives = 263/561 (46%), Gaps = 17/561 (3%)

Query: 141 PIVYYMMLEILS--KTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           P VY   + + S  KT     A R+L  M+ +G E    A+  ++  +           +
Sbjct: 144 PDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYEL 203

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
              M  + V+  L   N  + VL     + +  + L+++   G+ PN+ TYN  I+G C 
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQ 263

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNL 313
              +  A++++  +  +G  PD ++Y  ++  LCK  + +E    + KMVN     DS  
Sbjct: 264 RGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYT 323

Query: 314 FHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
           ++         G ++ A+ +V      G +PD  TY ++++G C  GE ++A  +  +  
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G KPN + Y   + GL + G  LEA ++ N   E+   P   T++++++GL + G +S
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A  +V+ M+ KG+FP     N+LI     + KM+ A + +   L+ G   +V  + SL+
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C+    E+ +     M      P+  T+  ++++L +  +++EA  L+ +M +K + 
Sbjct: 504 NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 563

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGK 603
           P  VT+ T+I  +C+ G ++    L  KM    K  ++   YN +I        +  A K
Sbjct: 564 PDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEK 623

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           +  +++      D  T  ++V+ +   G   L YK    M     IP L    +V   L 
Sbjct: 624 LFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLC 683

Query: 664 LEGKSEEADTLMLRFVERGHI 684
           +E +  EA  ++ R V++G +
Sbjct: 684 VEDRVYEAAGIIHRMVQKGLV 704



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 225/492 (45%), Gaps = 52/492 (10%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQK 204
           +L +L K    +  +++L  + +RG+   P  F+Y   +    + G+L  A+ ++  + +
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGV--LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
               P+++  N  I+ L   +K  +A  +L +M   G+ P+  TYN LI GYC    ++ 
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------N 312
           A +++ +    G  PD+ +Y +++  LC E        L  + +                
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
              +QG I EA +L N+MS+ G IP+V T+  +VNG C++G +  A  +++ M   G  P
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           +  ++   ++G     K   A E+++   +    P+  TY+ +++GL +  K  +  +  
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           + MV+KG  P     N+L++SLCR  K+D A   ++E  NK    + V F +LI GFC+ 
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579

Query: 493 GDLEEALSLLDDMYLCKK------------------------------------DPDTVT 516
           GDL+ A +L   M    K                                     PD  T
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y  ++D   K G V    + +++M+  G +P++ T   VI+  C   RV +   ++ +M+
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699

Query: 577 SKQKCRTAYNQV 588
            K     A N +
Sbjct: 700 QKGLVPEAVNTI 711



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 192/413 (46%), Gaps = 20/413 (4%)

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNL----------FHDQGRIEEAKELVNQMSQMGCIP 337
           +GY  K + ++EV   M + V +  L          +  +G+++EA  +  +M    C P
Sbjct: 50  LGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEP 109

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
            V +Y A+++     G  DQA K+  +M   G  P+  S+T  +   C   +   A  ++
Sbjct: 110 TVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLL 169

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           N    +    N + Y  V+ G   E   +E  ++  +M+  G        N L++ LC++
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK 229

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G +   +K + + + +G   N+  +   I+G CQ+G+L+ A+ ++  +      PD +TY
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
             +I  L KN + +EA   + KM+++GL P   TY T+I  YC+ G V+    L E+++ 
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ----LAERIVG 345

Query: 578 KQKC------RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
                     +  Y  +I+ LC  G    A  +  + L    K +    + L++   N+G
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           + L A ++A  M  + LIP+++    +   L   G   +AD L+   + +G+ 
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/462 (22%), Positives = 194/462 (41%), Gaps = 59/462 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  ++    K  + Q A+R++      G    P+ F+Y  L+      G+   A+ 
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF--VPDQFTYRSLIDGLCHEGETNRALA 377

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           + +      + PN+++ NT I  L     + +A +    M   G+ P V T+N L+ G C
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
            +  + DA  L+  M  KG  PD  ++  ++     + +++   ++++ M+++       
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 N      + E+  E    M + GC P++ T+  ++   CR  +LD+A  +L++M
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI-TYSVVMHGLRREGK 424
            +    P+ V++   ++G C NG    A  +    EE +   ++  TY++++H    +  
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           ++ A  + +EMV +   P      L++   C+ G ++   KF+ E +  G          
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI-------- 669

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
                                      P   T   +I+ L    RV EA  ++ +M+ KG
Sbjct: 670 ---------------------------PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702

Query: 545 LVPTVVTYRTVIHRYCQVGRVE-DLLKLLEKMLSKQKCRTAY 585
           LVP  V      +  C V + E    KL+ + L K+ C T Y
Sbjct: 703 LVPEAV------NTICDVDKKEVAAPKLVLEDLLKKSCITYY 738


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 248/545 (45%), Gaps = 81/545 (14%)

Query: 114 VLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL--------- 164
           +L S AD  + L++F W+ ++++  H   + + +L  L+ TK     +  L         
Sbjct: 5   LLNSGADPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKD 64

Query: 165 ---------------------------------RLMARRGIECRPEAFSY---------- 181
                                             L   RG E    A  Y          
Sbjct: 65  YSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCN 124

Query: 182 -LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
            L+    +  +  +  +V   M K  +  N++  N  ++ L    KL +A   +E M++ 
Sbjct: 125 PLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVW 184

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIK---LIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           G++PNV+TYN LI GYC + RI    K   ++ EM  KG  P++V+Y  ++   CK++ +
Sbjct: 185 GVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENV 244

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                                    A  +  +M + G  P+VVTY  ++NG C  G++D+
Sbjct: 245 -----------------------SGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDE 281

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  +  QM     +PN V++   +NG C N    EA  + N  E++   PNA+TY+ ++ 
Sbjct: 282 AVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLID 341

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
              ++G++ +A  +   M+ +G FP     N LI  LCR+G +  A+  M E ++K  + 
Sbjct: 342 AYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSA 401

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +VV +  LI   C+KG+  +A+ LLD+M+    +P  VTY T++D   + G +  A  + 
Sbjct: 402 DVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVR 461

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSF 595
            +M  KG    VVT+  +I  +C  GR+ED   LL +ML +     RT Y  + E +   
Sbjct: 462 TRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEK 521

Query: 596 GYLEE 600
           G++ +
Sbjct: 522 GFVPD 526



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 193/363 (53%), Gaps = 5/363 (1%)

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG---KSLEAR 394
           +V+++  VVNG C+VG+L++A  +++ M   G  PN ++Y   ++G C  G   K  +A 
Sbjct: 154 NVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKAD 213

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            ++     +   PN +TY++++ G  ++  +S A  V  EM ++G  P  V  N+LI  L
Sbjct: 214 AILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGL 273

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C +GK+D A     + ++     NVV    LI GFC+   + EA++L +DM     DP+ 
Sbjct: 274 CSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNA 333

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           +TYTT+IDA  K+GR+E+A  L   M+ +G+ P V TY  +I   C+ G V+    L+ +
Sbjct: 334 MTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNE 393

Query: 575 MLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M+SK+       YN +I++LC  G   +A K+L ++          T + L++ Y  +G 
Sbjct: 394 MVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGN 453

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
              A  V  RM  +    ++     + +   L+G+ E+A+ L+   +ERG +  ++   +
Sbjct: 454 LRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEI 513

Query: 693 QRQ 695
            ++
Sbjct: 514 IKE 516



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 166/327 (50%), Gaps = 12/327 (3%)

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           ++S + C P       +++G  +  E    + + ++M     + N +S+   +NGLC  G
Sbjct: 117 KLSLISCNP-------LLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVG 169

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHG---LRREGKLSEACDVVREMVKKGFFPTPV 445
           K   A ++I   +    +PN ITY+ ++ G   + R GK+ +A  +++EMV KG  P  V
Sbjct: 170 KLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEV 229

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N+LI   C++  + GA +   E   +G   NVV +  LI G C  G ++EA++L D M
Sbjct: 230 TYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQM 289

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                +P+ VT+  +I+   KN  V EA  L   M  +G+ P  +TY T+I  YC+ GR+
Sbjct: 290 VSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRM 349

Query: 566 EDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           ED   L   M+ +      + YN +I  LC  G ++ A  ++ +++     AD  T ++L
Sbjct: 350 EDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNIL 409

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIP 650
           ++S   KG    A K+   MF + L P
Sbjct: 410 IDSLCKKGESRKAVKLLDEMFEKGLNP 436



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 149/314 (47%), Gaps = 5/314 (1%)

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N++     +     N K L   E    + +  +  + I+ + ++ GL +E +  +   V 
Sbjct: 84  NSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVY 143

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           REM+K+      +  N+++  LC+ GK++ A   +++    G + NV+ + +LI G+C+ 
Sbjct: 144 REMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKM 203

Query: 493 ---GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
              G + +A ++L +M      P+ VTY  +ID   K+  V  A  +  +M  +GL P V
Sbjct: 204 GRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNV 263

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
           VTY  +I+  C  G+V++ + L ++M+S   +     +N +I   C    + EA  +   
Sbjct: 264 VTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFND 323

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           + +     +A T   L+++Y   G    A+ +   M +R + P++     +   L  +G 
Sbjct: 324 MEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGD 383

Query: 668 SEEADTLMLRFVER 681
            + A +LM   V +
Sbjct: 384 VKAARSLMNEMVSK 397



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 160/364 (43%), Gaps = 43/364 (11%)

Query: 361 MLQQMYHHGCKPN------TVSYTAF------------LNGLCHNGKSLEAREMIN--TS 400
           +LQQ+ + G  P       T S   F            LN L H  K  + R  ++    
Sbjct: 1   LLQQLLNSGADPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVK 60

Query: 401 EEEWWTPNAITYSVVMHG----------------LRREGKLSEACDVVREMVKKGFFPTP 444
            E+ ++ +AI +++ M G                  R  K+    +  +     GF  + 
Sbjct: 61  YEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSL 120

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           +  N L+  L +E +    +   +E + +   +NV++F  ++ G C+ G L  A  +++D
Sbjct: 121 ISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIED 180

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVE---EATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           M +    P+ +TY T+ID   K GR+    +A  ++ +M++KG+ P  VTY  +I  +C+
Sbjct: 181 MKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCK 240

Query: 562 VGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
              V   +++  +M  +Q  R     YN +I  LCS G ++EA  +  +++ +  + +  
Sbjct: 241 DENVSGAMRVFGEM-QRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVV 299

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           T +VL+  +        A  +   M  + + P+      + +    +G+ E+A  L    
Sbjct: 300 THNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMM 359

Query: 679 VERG 682
           ++RG
Sbjct: 360 IDRG 363


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 244/508 (48%), Gaps = 21/508 (4%)

Query: 137 YRHDP---IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           + H P   + +  +L  ++KTK       +   M   GI       + L+ ++    +  
Sbjct: 60  HMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPG 119

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  VL+ + K  + P+     T I  L V  K+  AL   ++M   G  PNV+TY  LI
Sbjct: 120 FAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLI 179

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND--- 310
            G C +     AI+L+  M    C PD V Y +++  LCK++++ E  +L  KMV     
Sbjct: 180 NGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGIS 239

Query: 311 ------SNLFHDQGRIEEAKE---LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                 ++L H    + E K    L+NQM     +PDVV ++ VV+  C+ G++ +A  +
Sbjct: 240 PDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDV 299

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           +  M   G +PN V+Y A ++G C   +  EA ++ +T     + PN I+Y+ +++G  +
Sbjct: 300 VDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCK 359

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
             ++ +A  +  EM +K   P  V  N L+  LC  G++  A     E +  G   ++  
Sbjct: 360 IQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLAT 419

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +  L+   C+K  L+EA++LL  +     DPD   YT +ID + + G +E A ++   + 
Sbjct: 420 YRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLS 479

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----LSKQKCRTAYNQVIENLCSFGY 597
           SKGL P V TY  +I+  C+ G +++  KL  +M     S   C   YN + + L     
Sbjct: 480 SKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGC--TYNTITQGLLQNKE 537

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVE 625
              A ++L ++L     AD ST  +LVE
Sbjct: 538 ALRAIQLLQEMLARGFSADVSTTTLLVE 565



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 220/450 (48%), Gaps = 25/450 (5%)

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
            +M   GI P+V T N LI  +C L+R   A  ++ ++   G  PD  ++ T++  LC E
Sbjct: 91  NQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVE 150

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
            +I +   L +KM+ +                       G  P+VVTY  ++NG C+VG 
Sbjct: 151 GKIGDALHLFDKMIGE-----------------------GFQPNVVTYGTLINGLCKVGN 187

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
            + A ++L+ M    C+P+ V YT+ ++ LC + +  EA  + +    +  +P+  TY+ 
Sbjct: 188 TNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTS 247

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++H L    +      ++ +M+     P  V  + ++ +LC+EGK+  A   +   + +G
Sbjct: 248 LIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRG 307

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              NVV + +L+ G C + +++EA+ + D M      P+ ++Y T+I+   K  R+++AT
Sbjct: 308 VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKAT 367

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENL 592
            L  +M  K L+P  VTY T++H  C VGR++D + L  +M++  +      Y  +++ L
Sbjct: 368 YLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYL 427

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C   +L+EA  +L  +  +    D     ++++     G    A  +   + ++ L P++
Sbjct: 428 CKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNV 487

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +    +   L   G  +EA+ L +     G
Sbjct: 488 RTYTIMINGLCRRGLLDEANKLFMEMDGNG 517



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 195/406 (48%), Gaps = 12/406 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   G +     +  L+    + G    A+ +L  M++    P++++  + I  L    +
Sbjct: 163 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 222

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +A     +M   GI+P++ TY  LI   C+L   K    L+++M      PD V + T
Sbjct: 223 VTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFST 282

Query: 287 VMGYLCKEKRIKEVRDLMEKM--------VNDSNLFHD----QGRIEEAKELVNQMSQMG 334
           V+  LCKE +I E  D+++ M        V   N   D    Q  ++EA ++ + M   G
Sbjct: 283 VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 342

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P+V++Y  ++NG+C++  +D+A  + ++M      PNTV+Y   ++GLCH G+  +A 
Sbjct: 343 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAI 402

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            + +        P+  TY +++  L ++  L EA  +++ +      P      ++I  +
Sbjct: 403 ALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGM 462

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CR G+++ A+       +KG   NV  +T +I G C++G L+EA  L  +M      PD 
Sbjct: 463 CRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDG 522

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
            TY TI   L +N     A +L+ +ML++G    V T   ++   C
Sbjct: 523 CTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 568



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 187/393 (47%), Gaps = 27/393 (6%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG--K 191
           Q   + D +VY  +++ L K +    A  +   M  +GI   P+ F+Y  + +S     +
Sbjct: 200 QGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGIS--PDIFTYTSLIHSLCNLCE 257

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
            ++   +L+ M  + + P+++I +T +  L    K+ +A   ++ M + G+ PNV+TYN 
Sbjct: 258 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 317

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           L+ G+C    + +A+K+ D M   G +P+ +SY T++   CK +R+ +   L E+M    
Sbjct: 318 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQ-- 375

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                       KEL         IP+ VTY  +++G C VG L  A  +  +M  HG  
Sbjct: 376 ------------KEL---------IPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQI 414

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+  +Y   L+ LC      EA  ++ T E     P+   Y++V+ G+ R G+L  A D+
Sbjct: 415 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 474

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
              +  KG  P      ++I  LCR G +D A K   E    GC+ +   + ++ +G  Q
Sbjct: 475 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 534

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             +   A+ LL +M       D  T T +++ L
Sbjct: 535 NKEALRAIQLLQEMLARGFSADVSTTTLLVEML 567



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 187/400 (46%), Gaps = 47/400 (11%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L NQM   G  PDV T   ++N FC +     A  +L ++   G +P+T ++T  + GL
Sbjct: 88  SLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGL 147

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  GK  +A  + +    E + PN +TY  +++GL + G  + A  ++R M +    P  
Sbjct: 148 CVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDV 207

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V    +I SLC++ ++  A     + + +G + ++  +TSLI   C   + +   +LL+ 
Sbjct: 208 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQ 267

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT------------- 551
           M   K  PD V ++T++DAL K G++ EA +++  M+ +G+ P VVT             
Sbjct: 268 MINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSE 327

Query: 552 ----------------------YRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQ 587
                                 Y T+I+ YC++ R++    L E+M  K+       YN 
Sbjct: 328 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNT 387

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE-----SYLNKGIPLLAYKVACR 642
           ++  LC  G L++A  +  +++      D +T  +L++     S+L++ + LL       
Sbjct: 388 LMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLK-----T 442

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +   N+ PD+++   V + +   G+ E A  +      +G
Sbjct: 443 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKG 482



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 155/330 (46%), Gaps = 23/330 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D +++  +++ L K      A  V+ +M  RG+E     ++ LM  +    ++  A+ V 
Sbjct: 276 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 335

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M     APN++  NT I+      ++ KA    E M    + PN +TYN L+ G C +
Sbjct: 336 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHV 395

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R++DAI L  EM   G  PD  +Y  ++ YLCK+  + E   L+ K +  SN+      
Sbjct: 396 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALL-KTIEGSNM------ 448

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                            PD+  YT V++G CR GEL+ A+ +   +   G +PN  +YT 
Sbjct: 449 ----------------DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTI 492

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +NGLC  G   EA ++    +    +P+  TY+ +  GL +  +   A  +++EM+ +G
Sbjct: 493 MINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 552

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           F        LL++ LC +      K+ + E
Sbjct: 553 FSADVSTTTLLVEMLCDDKLDQSVKQILSE 582



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 132/275 (48%), Gaps = 2/275 (0%)

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           LD A     +M H    P+TV +   L  +    +      + N  +     P+  T ++
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           +++      +   A  V+ +++K G  P       LI+ LC EGK+  A     + + +G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              NVV + +LI G C+ G+   A+ LL  M      PD V YT+IID+L K+ +V EA 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENL 592
            L  KM+ +G+ P + TY ++IH  C +   + +  LL +M++ +       ++ V++ L
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           C  G + EA  ++  ++    + +  T + L++ +
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 322



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 76/169 (44%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++L+ L K      A  +L+ +    ++   + ++ ++    RAG+L  A  + 
Sbjct: 416 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 475

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S +    + PN+      I+ L     L +A +    M   G +P+  TYN + +G    
Sbjct: 476 SNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN 535

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
                AI+L+ EM  +G S D  +   ++  LC +K  + V+ ++ + V
Sbjct: 536 KEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFV 584


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 155/573 (27%), Positives = 264/573 (46%), Gaps = 41/573 (7%)

Query: 95  LEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKT 154
           +E  L+ +   ++   I +VL+ Q D R+  + F W+ + W  R    V  +++  L K 
Sbjct: 48  MEDGLKVISSRIRSYTITSVLQEQPDTRLGFRLFIWSLKSWHLRCRT-VQDLIIGKLIKE 106

Query: 155 KLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
              +   +VL+ +    I+   EAFS L+ AYS AG    A+    +M+     P+L   
Sbjct: 107 NAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAF 166

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N  +H LV       AL    +M    + P+V+TY  LI G C   + +DA+ L DEM  
Sbjct: 167 NLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTD 226

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
           +G  P+++ Y  V+  LC+ K+I +                       A+ L ++M   G
Sbjct: 227 RGILPNQIIYSIVLSGLCQAKKIFD-----------------------AQRLFSKMRASG 263

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C  D++TY  ++NGFC+ G LD A  +LQ +   G     + Y   +NGL    +  EA 
Sbjct: 264 CNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAH 323

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
                   E   P+ + Y++++ GL +EG+++EA  ++ EM ++G  P  +  N LI+  
Sbjct: 324 MWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGF 383

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C  G +D A+    E     C  N   ++ LI G C+ G + +A  +  +M      P  
Sbjct: 384 CDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSV 443

Query: 515 VTYTTIIDALSKNGRVEEATELMMKM-----------LSKGL--VPTVVTYRTVIHRYCQ 561
           VT+ ++I+ L K  R+EEA  L  +M           LS+G   V  + + + ++ R C+
Sbjct: 444 VTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCE 503

Query: 562 VGRVEDLLKLLEKMLSK---QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
            G +    KLL +++        RT YN +I   C FG +  A K+  ++       D+ 
Sbjct: 504 SGMILKAYKLLMQLVDSGVLPDIRT-YNILINGFCKFGNINGAFKLFKEMQLKGHMPDSV 562

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           T   L++     G    A ++  +M  +  +P+
Sbjct: 563 TYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPE 595



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 132/326 (40%), Gaps = 39/326 (11%)

Query: 142 IVYYMMLEILSKT----KLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           +++Y M EI+ K     +L QG  +V  +           +   +M     +G +  A  
Sbjct: 464 LLFYQM-EIVRKPSLFLRLSQGTDKVFDI----------ASLQVMMERLCESGMILKAYK 512

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  +  + V P++   N  I+       +  A +  + MQL G  P+ +TY  LI G  
Sbjct: 513 LLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLY 572

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              R +DA+++ ++M  KGC P+  +Y T+M + C+E  I     +  K + D   + D+
Sbjct: 573 RAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDE 632

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
                A+   N+                        EL  A + L +M       +   Y
Sbjct: 633 KVRVVAESFDNE------------------------ELQTAIRRLLEMDIKSKNFDLAPY 668

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T FL GL    +  EA  + +  ++     ++ +  +++  L     L  A DV    ++
Sbjct: 669 TIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLE 728

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGA 463
           +GF   P   N L+ +L    + D A
Sbjct: 729 RGFRLMPPICNQLLCNLLHLDRKDDA 754


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 151/535 (28%), Positives = 252/535 (47%), Gaps = 60/535 (11%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A   LR++ RRG                 A +L +++  L+    AAV P    C   I 
Sbjct: 70  ATERLRVLVRRG-------------ELDDALRLVDSLAGLNPPSPAAVGP----CAALIK 112

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    + A A R L     A   P+V+ YN ++ GYC   ++  A +L+ +MP++   P
Sbjct: 113 KLCASGRTADARRVL-----AASGPDVMVYNAMVAGYCGAGQLDAARRLVADMPVE---P 164

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D  +Y T++  LC                        +GR   A  ++  M + GC+PDV
Sbjct: 165 DAYTYNTLIRGLC-----------------------GRGRTSNALAVLEDMFRRGCLPDV 201

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           VTYT ++   C+     QA K+L +M+  GC P+ V+Y   LNG+C  G+  +A E +  
Sbjct: 202 VTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKN 261

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
                  PN ++Y++V+ GL    +  +A  ++ EM  KG  P  V  N+LI  LCR G 
Sbjct: 262 LPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGL 321

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           ++ A + +++    GC  N +++  L+  FC++  + +A+  ++ M      PD V+Y T
Sbjct: 322 VEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNT 381

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK- 578
           ++ AL +NG V+ A EL+ ++  KG  P +++Y TVI    + G+ ++ L+LL++M SK 
Sbjct: 382 LLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKG 441

Query: 579 -QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK-----GI 632
            Q     Y+ +   LC    +EEA +   KV     +  A+  + ++     +      I
Sbjct: 442 LQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAI 501

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
            L AY     M +   +P+      + E L  EG  +EA  L  +   RG +  K
Sbjct: 502 DLFAY-----MISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVVNKK 551



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 207/409 (50%), Gaps = 27/409 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  ++  L        A  VL  M RRG  C P+  +Y  L+ A  +    + AM 
Sbjct: 165 DAYTYNTLIRGLCGRGRTSNALAVLEDMFRRG--CLPDVVTYTILLEATCKRSGYKQAMK 222

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M     AP+++  N  ++ +    ++  A+ FL+ +   G  PN ++YN ++KG  
Sbjct: 223 LLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLF 282

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              R +DA KL++EM  KGC P+ V++  ++ +LC+                       +
Sbjct: 283 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCR-----------------------R 319

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G +E A E++ QM Q GC P+ ++Y  +++ FC+  ++ +A + ++ M   GC P+ VSY
Sbjct: 320 GLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSY 379

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              L  LC NG+   A E+++  +++  +P  I+Y+ V+ GL + GK  EA +++ EM  
Sbjct: 380 NTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTS 439

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P  +  + +   LCRE +++ A +   +  + G       + +++ G C++ +   
Sbjct: 440 KGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHN 499

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           A+ L   M      P+  TYT +++ L+  G V+EA EL  ++ S+G+V
Sbjct: 500 AIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 256/523 (48%), Gaps = 28/523 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ A ++  K    + +   MQ   ++ +L   +  I+     ++L+ AL  L +M 
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+++T + L+ GYC   RI DA+ L+D+M   G  PD  ++ T++  L       
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL------- 198

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                           H++    EA  LV+QM Q GC PD+VTY  VVNG C+ G++D A
Sbjct: 199 --------------FLHNKA--SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L++M     + + V Y   ++GLC      +A  +    + +   P+  TYS ++  
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L   G+ S+A  ++ +M+++   P  V  + LI +  +EGK+  A+K   E + +    +
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +  ++SLI GFC    L+EA  + + M      P+ VTY+T+I    K  RVEE  EL  
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
           +M  +GLV   VTY T+IH + Q    ++   + ++M+S         YN +++ LC  G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            L +A  +   + R+  + D  T ++++E     G     +++ C +  + + P++    
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH--LQRQRV 697
            +      +G  EEAD+L+ +  E G + P S  +  L R R+
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARL 584



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 244/507 (48%), Gaps = 15/507 (2%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           HD   Y + +    +      A  VL  M + G E      S L+  Y  + ++ +A+ +
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +  M +    P+     T IH L + NK ++A+  +++M   G  P+++TY  ++ G C 
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-------- 310
              I  A+ L+ +M       D V Y T++  LCK K + +  +L  +M N         
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295

Query: 311 -SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            S+L     + GR  +A  L++ M +    P+VVT++A+++ F + G+L +A+K+  +M 
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                P+  +Y++ +NG C + +  EA+ M      +   PN +TYS ++ G  +  ++ 
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           E  ++ REM ++G     V    LI    +    D A+   ++ ++ G   N++ +  L+
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C+ G L +A+ + + +     +PD  TY  +I+ + K G+VE+  EL   +  KG+ 
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKI 604
           P V+ Y T+I  +C+ G  E+   LL+KM        +  YN +I      G  E + ++
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595

Query: 605 LGKVLRTASKADASTCHVLVESYLNKG 631
           + ++       DAST   LV + L+ G
Sbjct: 596 IKEMRSCGFAGDASTIG-LVTNMLHDG 621



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 227/487 (46%), Gaps = 30/487 (6%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI      +S  +  + R  +L  A+ VL+ M K    P+++  ++ ++      +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           ++ A+  +++M   G  P+  T+  LI G    ++  +A+ L+D+M  +GC PD V+Y T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE--------------------EAKEL 326
           V+  LCK   I     L++KM        ++G+IE                    +A  L
Sbjct: 229 VVNGLCKRGDIDLALSLLKKM--------EKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
             +M   G  PDV TY+++++  C  G    A ++L  M      PN V+++A ++    
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            GK +EA ++ +   +    P+  TYS +++G     +L EA  +   M+ K  FP  V 
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            + LI+  C+  +++   +  +E   +G   N V +T+LI GF Q  D + A  +   M 
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                P+ +TY  ++D L KNG++ +A  +   +    + P + TY  +I   C+ G+VE
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520

Query: 567 DLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           D  +L   +  K       AYN +I   C  G  EEA  +L K+       ++ T + L+
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580

Query: 625 ESYLNKG 631
            + L  G
Sbjct: 581 RARLRDG 587



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 223/443 (50%), Gaps = 32/443 (7%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           Y+ D   +  ++  L        A  ++  M +RG  C+P+  +Y  V     + G +  
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG--CQPDLVTYGTVVNGLCKRGDIDL 241

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +L  M+K  +  +++I NT I  L     +  AL     M   GI P+V TY+ LI 
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DS 311
             C+  R  DA +L+ +M  +  +P+ V++  ++    KE ++ E   L ++M+    D 
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361

Query: 312 NLF-----------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
           ++F           HD  R++EAK +   M    C P+VVTY+ ++ GFC+   +++  +
Sbjct: 362 DIFTYSSLINGFCMHD--RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGL-----CHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           + ++M   G   NTV+YT  ++G      C N + +  ++M++        PN +TY+++
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ-MVFKQMVSVGVH----PNILTYNIL 474

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM-DGAKKFMQECLNKG 474
           + GL + GKL++A  V   + +    P     N++I+ +C+ GK+ DG + F    L KG
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL-KG 533

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
            + NV+ + ++I GFC+KG  EEA SLL  M      P++ TY T+I A  ++G  E + 
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593

Query: 535 ELMMKMLSKGLVPTVVTYRTVIH 557
           EL+ +M S G      T   V +
Sbjct: 594 ELIKEMRSCGFAGDASTIGLVTN 616



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 170/354 (48%), Gaps = 4/354 (1%)

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
           G  P   S++ + G  C E+          +++   N   D  ++++A +L   M +   
Sbjct: 22  GNPPTVPSFFNLCGSGCWERSFASASGDYREILR--NRLSDIIKVDDAVDLFGDMVKSRP 79

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            P +V +  +++   ++ + +    + +QM   G   +  +Y+ F+N  C   +   A  
Sbjct: 80  FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           ++    +  + P+ +T S +++G     ++S+A  +V +MV+ G+ P       LI  L 
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
              K   A   + + + +GC  ++V + +++ G C++GD++ ALSLL  M   K + D V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            Y TIID L K   +++A  L  +M +KG+ P V TY ++I   C  GR  D  +LL  M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319

Query: 576 LSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           + ++       ++ +I+     G L EA K+  ++++ +   D  T   L+  +
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 175/377 (46%), Gaps = 27/377 (7%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           AL  F   D +   R D   Y  ++  L        A R+L  M  R I      FS L+
Sbjct: 277 ALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
            A+ + GKL  A  +   M K ++ P++   ++ I+   + ++L +A    E M      
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRD 302
           PNV+TY+ LIKG+C   R+++ ++L  EM  +G   + V+Y T++ G+        + RD
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF-------QARD 448

Query: 303 LMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                             + A+ +  QM  +G  P+++TY  +++G C+ G+L +A  + 
Sbjct: 449 -----------------CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           + +     +P+  +Y   + G+C  GK  +  E+      +  +PN I Y+ ++ G  R+
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G   EA  ++++M + G  P     N LI++  R+G  + + + ++E  + G A +    
Sbjct: 552 GSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 611

Query: 483 TSLIRGFCQKGDLEEAL 499
             L+      G L+++ 
Sbjct: 612 -GLVTNMLHDGRLDKSF 627


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 247/506 (48%), Gaps = 25/506 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ A ++  K    + +   MQ+  ++ NL   N  I+     ++++ AL  L +M 
Sbjct: 88  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+++T + L+ GYC   RI DA+ L+D+M   G  PD +++ T++  L       
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL------- 200

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                           H++    EA  LV++M Q GC P++VTY  VVNG C+ G++D A
Sbjct: 201 --------------FLHNKA--SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L +M     + N V Y+  ++ LC      +A  +    E +   PN ITYS ++  
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L    + S+A  ++ +M+++   P  V  N LI +  +EGK+  A+K   E + +    +
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +  ++SLI GFC    L+EA  + + M      P+ VTY T+I+   K  R++E  EL  
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
           +M  +GLV   VTY T+IH + Q    ++   + ++M+S         YN +++ LC  G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            LE+A  +   + R+  +    T ++++E     G     + + C +  + + PD+ +  
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544

Query: 657 KVSERLILEGKSEEADTLMLRFVERG 682
            +      +G  EEAD L  +  E G
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDG 570



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 236/487 (48%), Gaps = 25/487 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R GI      ++ L+  + R  ++  A+ +L  M K    P+++  ++ ++    G +
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           ++ A+  +++M   G  P+ +T+  LI G    ++  +A+ L+D M  +GC P+ V+Y  
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           V+  LCK                       +G I+ A  L+N+M       +VV Y+ V+
Sbjct: 231 VVNGLCK-----------------------RGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C+    D A  +  +M + G +PN ++Y++ ++ LC+  +  +A  +++   E    
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN +T++ ++    +EGKL EA  +  EM+K+   P     + LI   C   ++D AK  
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +  ++K C  NVV + +LI GFC+   ++E + L  +M       +TVTYTT+I    +
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--A 584
               + A  +  +M+S G+ P ++TY T++   C+ G++E  + + E +   +   T   
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN +IE +C  G +E+   +   +     K D    + ++  +  KG+   A  +  +M 
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567

Query: 645 NRNLIPD 651
               +PD
Sbjct: 568 EDGPLPD 574



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 220/449 (48%), Gaps = 12/449 (2%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           H+   Y +++    +      A  +L  M + G E      S L+  Y    ++ +A+ +
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +  M +    P+ +   T IH L + NK ++A+  ++RM   G  PN++TY  ++ G C 
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-------- 310
              I  A  L+++M       + V Y TV+  LCK +   +  +L  +M N         
Sbjct: 238 RGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 297

Query: 311 -SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            S+L     +  R  +A  L++ M +    P+VVT+ A+++ F + G+L +A+K+  +M 
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                P+  +Y++ +NG C + +  EA+ M      +   PN +TY+ +++G  +  ++ 
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           E  ++ REM ++G     V    LI    +    D A+   ++ ++ G   N++ + +L+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C+ G LE+A+ + + +   K +P   TY  +I+ + K G+VE+  +L   +  KG+ 
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           P V+ Y T+I  +C+ G  E+   L  KM
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKM 566



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 27/413 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           YR D I +  ++  L        A  ++  M +RG  C+P   +Y +V     + G +  
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDIDL 243

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +L+ M+ A +  N++I +T I  L        AL     M+  G+ PNV+TY+ LI 
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
             C+  R  DA +L+ +M  +  +P+ V++  ++    KE                    
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE-------------------- 343

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G++ EA++L ++M +    PD+ TY++++NGFC    LD+AK M + M    C PN 
Sbjct: 344 ---GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y   +NG C   +  E  E+     +     N +TY+ ++HG  +      A  V ++
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MV  G  P  +  N L+  LC+ GK++ A    +          +  +  +I G C+ G 
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           +E+   L   + L    PD + Y T+I    + G  EEA  L  KM   G +P
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/194 (18%), Positives = 79/194 (40%), Gaps = 7/194 (3%)

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
           ++  ++R       L++A+ L   M   +  P    +  ++ A++K  + +    L  KM
Sbjct: 52  DYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM 111

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYL 598
              G+   + TY  +I+ +C+  ++   L LL KM  L  +      + ++   C    +
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
            +A  ++ +++    + D  T   L+           A  +  RM  R   P+L     V
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL-----V 226

Query: 659 SERLILEGKSEEAD 672
           +  +++ G  +  D
Sbjct: 227 TYGVVVNGLCKRGD 240


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 268/566 (47%), Gaps = 25/566 (4%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR 165
           L P+ +  V+R Q D   AL+ F    ++  ++H    Y  ++E L      +  + VL 
Sbjct: 5   LLPKHVTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLV 64

Query: 166 LMARR-GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
            M +  G       +   M  Y R GK++ A+ V   M      P +   N  + +LV  
Sbjct: 65  DMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDS 124

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
               +A +   RM+  GITP+V ++   +K +C   R   A++L++ M  +GC  + V+Y
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAY 184

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFH---DQGRIEEAKELVNQMSQ 332
            TV+G   +E    E  +L  KM+           + L H    +G ++E ++L++++ +
Sbjct: 185 CTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIK 244

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G +P++ TY   + G C+ GELD A +M+ ++   G KP+ V+Y   + GLC N K  E
Sbjct: 245 RGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQE 304

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A   +     E   P++ TY+ ++ G  + G +  A  ++   V  GF P       LI 
Sbjct: 305 AEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLID 364

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC EG+ + A     E L KG   NV+ + +LI+G   +G + EA  L  +M      P
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIP 424

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           +  T+  +++ L K G V +A  L+  M+SKG  P + T+  +IH Y    ++E+ L++L
Sbjct: 425 EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL 484

Query: 573 EKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY--- 627
           + M+          YN ++  LC     E+  +    ++      +  T ++L+ES    
Sbjct: 485 DVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544

Query: 628 --LNKGIPLLAYKVACRMFNRNLIPD 651
             L+K + LL       M N+++ PD
Sbjct: 545 HKLDKALGLLE-----EMKNKSVNPD 565



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 230/493 (46%), Gaps = 48/493 (9%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L +L K    +  +++L  + +RG+      +++ +    + G+L  A+ ++  +    
Sbjct: 222 LLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQG 281

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
             P+++  N  I+ L   +K  +A  +L ++   G+ P+  TYN LI GYC    ++ A 
Sbjct: 282 PKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAE 341

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLF 314
           +++      G  PD+ +Y +++  LC E        L  + +                  
Sbjct: 342 RILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
            +QG I EA +L ++MS+ G IP+V T+  +VNG C++G +  A  +++ M   G  P+ 
Sbjct: 402 SNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            ++   ++G     K   A E+++   +    P+  TY+ +++GL +  K  +  +  + 
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKT 521

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MV+KG  P     N+L++SLCR  K+D A   ++E  NK    + V F +LI GFC+ GD
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 495 LEEALSL---LDDMYL--CKK-------------------------------DPDTVTYT 518
           L+ A +L   ++++Y+  C                                  PD  TY 
Sbjct: 582 LDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            ++D   K G V+   + +++M+  G +P++ T   VI+  C   RV +   ++ +M+ K
Sbjct: 642 LMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701

Query: 579 QKCRTAYNQVIEN 591
                A N + ++
Sbjct: 702 GLVPEAVNTIFDH 714



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 174/374 (46%), Gaps = 10/374 (2%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G+++EA  +  +M    C P V +Y A+++     G  DQA K+  +M   G  P+  S
Sbjct: 89  KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYS 148

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           +T  +   C   +   A  ++N    +    N + Y  V+ G   E    E  ++  +M+
Sbjct: 149 FTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKML 208

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
             G        N L+  LC++G +   +K + + + +G   N+  +   I+G CQKG+L+
Sbjct: 209 ASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELD 268

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            A+ ++  +      PD VTY  +I  L KN + +EA   + K++++GL P   TY T+I
Sbjct: 269 AAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLI 328

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRT------AYNQVIENLCSFGYLEEAGKILGKVLR 610
             YC+ G V+    L E++L              Y  +I+ LC  G    A  +  + L 
Sbjct: 329 AGYCKGGMVQ----LAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALG 384

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
              K +    + L++   N+G+ L A ++A  M  + LIP+++    +   L   G   +
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444

Query: 671 ADTLMLRFVERGHI 684
           AD L+   + +G+ 
Sbjct: 445 ADGLVKVMISKGYF 458


>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
 gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 535

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/472 (29%), Positives = 241/472 (51%), Gaps = 30/472 (6%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWR-YRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           L P+++ +++  Q +  +ALQ F +A +    + H+   Y+ +L  LS+ +     + ++
Sbjct: 47  LFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLM 106

Query: 165 RLM--ARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
             +  +   I+C    F  L+  Y  AG+  ++M +   +    V  ++   NT ++VL+
Sbjct: 107 ADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLI 166

Query: 223 VGNK--LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
              +  L  A+ F    +  GITPN+ T N L+K  C  + I+ A K++DE+P  G  P+
Sbjct: 167 QNQRFDLVHAM-FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPN 225

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
            V+Y T++G                        +  +G +E AK ++ +M   G  PD  
Sbjct: 226 LVTYTTILGG-----------------------YVARGDMESAKRVLEEMLDRGWYPDAT 262

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TYT +++G+C++G   +A  ++  M  +  +PN V+Y   +  LC   KS EAR M +  
Sbjct: 263 TYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
            E  + P++     V+  L  + K+ EAC + R+M+K    P    ++ LI  LC+EG++
Sbjct: 323 LERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRV 382

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             A+K   E   KG   +++ + +LI G C+KG+L EA  L DDMY  K  P+  TY  +
Sbjct: 383 TEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVL 441

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           I+ LSKNG V+E   ++ +ML  G  P   T+  +     ++G+ ED +K++
Sbjct: 442 IEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 155/313 (49%), Gaps = 15/313 (4%)

Query: 176 PEAFS--YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P  F+   L+ A  +   + +A  VL  +    + PNL+   T +   V    +  A R 
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRV 248

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           LE M   G  P+  TY  L+ GYC L R  +A  ++D+M      P++V+Y  ++  LCK
Sbjct: 249 LEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 308

Query: 294 EKRIKEVRDLMEKMVN-----DSNL-------FHDQGRIEEAKELVNQMSQMGCIPDVVT 341
           EK+  E R++ ++M+      DS+L         +  +++EA  L  +M +  C+PD   
Sbjct: 309 EKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNAL 368

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
            + +++  C+ G + +A+K+  + +  G  P+ ++Y   + G+C  G+  EA  + +   
Sbjct: 369 LSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMY 427

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           E    PNA TY+V++ GL + G + E   V+ EM++ G FP      +L + L + GK +
Sbjct: 428 ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEE 487

Query: 462 GAKKFMQECLNKG 474
            A K +   +  G
Sbjct: 488 DAMKIVSMAVMNG 500



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 175/424 (41%), Gaps = 16/424 (3%)

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVND-------SNLFHD-------QGRIEEAKELVN 328
           +Y++++  L + +    V  LM  + N         NLF D        GR E +  +  
Sbjct: 85  TYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFL 144

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH-GCKPNTVSYTAFLNGLCHN 387
           ++   G    V +   ++N   +    D    M +      G  PN  +    +  LC  
Sbjct: 145 RIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKK 204

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
                A ++++        PN +TY+ ++ G    G +  A  V+ EM+ +G++P     
Sbjct: 205 NDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTY 264

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            +L+   C+ G+   A   M +        N V +  +IR  C++    EA ++ D+M  
Sbjct: 265 TVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLE 324

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD+     +IDAL ++ +V+EA  L  KML    +P      T+IH  C+ GRV +
Sbjct: 325 RSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTE 384

Query: 568 LLKLLEKMLSKQ-KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
             KL ++           YN +I  +C  G L EAG++   +     K +A T +VL+E 
Sbjct: 385 ARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG 444

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
               G      +V   M      P+      + E L   GK E+A  ++   V  G +  
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDK 504

Query: 687 KSEE 690
           +S E
Sbjct: 505 ESWE 508



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 120/282 (42%), Gaps = 24/282 (8%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           + AKRVL  M  RG       ++ LM  Y + G+   A  V+  M+K  + PN +     
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I  L    K  +A    + M      P+      +I   C+ H++ +A  L  +M    C
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
            PD     T++ +LCKE R+ E R L ++                         + G IP
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDEF------------------------EKGSIP 398

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
            ++TY  ++ G C  GEL +A ++   MY   CKPN  +Y   + GL  NG   E   ++
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 458

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
               E    PN  T+ ++  GL++ GK  +A  +V   V  G
Sbjct: 459 EEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 263/541 (48%), Gaps = 71/541 (13%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            + +++ +L  +     A+ +   M  +G E    +F  L+  Y RAG     + +L  M
Sbjct: 58  TFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEM 117

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
           ++   +PN ++ NT I       K   A + ++ M+  G++P+V+T+N  I   C   ++
Sbjct: 118 RRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKV 177

Query: 263 KDAIKLIDEMPLKGC----SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ- 317
            +A ++  +M +        P+ ++Y  ++G  CKE  ++E R L EKM    NL + + 
Sbjct: 178 LEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRES 237

Query: 318 -----------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                      G++ EA+ ++ +M  MG  P+V +Y  V++G C+ G L  A+ +++ M 
Sbjct: 238 YNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMT 297

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  P+TV+YT  L+G CH GK  EA  ++     +  +PN  T +++++ L +EG++S
Sbjct: 298 SSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRIS 357

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA +++++M +KG+    V  N++I  LC  GK+D A             + +VN     
Sbjct: 358 EAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKA-------------IEIVN-GMWT 403

Query: 487 RGFCQKGDLEEA-LSLLDDMYLCKK-DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
            G    G+L  + + L+DD    KK  PD ++Y+TII  L K GRV EA +  ++M+ K 
Sbjct: 404 HGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKN 463

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---------------------- 582
           L P    Y   IH +C+ G++    ++L+ M  K+ C                       
Sbjct: 464 LQPDSAIYDVFIHSFCKEGKISSAFRVLKDM-EKKGCNKTLQTYNSLIMGLGSKNQIFEI 522

Query: 583 ----------------TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
                           + YN V+ +LC  G +++A  +L ++L+     + S+  +L+++
Sbjct: 523 YGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKA 582

Query: 627 Y 627
           +
Sbjct: 583 F 583



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 234/511 (45%), Gaps = 38/511 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y +ML    K  + + A+ +   M         E+++  ++   R GKL  A  VL  
Sbjct: 201 ITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKE 260

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + PN+   N  +  L     L  A   +  M  +G+ P+ +TY  L+ GYC   +
Sbjct: 261 MVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGK 320

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDS---NL 313
           + +A  ++ EM   GCSP+  +   ++  L KE RI E  +L++KM     V D+   N+
Sbjct: 321 VSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNI 380

Query: 314 FHD----QGRIEEAKELVNQMSQMG-----------------------CIPDVVTYTAVV 346
             D     G++++A E+VN M   G                       C+PD+++Y+ ++
Sbjct: 381 VIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTII 440

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C+ G + +AKK   +M     +P++  Y  F++  C  GK   A  ++   E++   
Sbjct: 441 SGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCN 500

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
               TY+ ++ GL  + ++ E   ++ EM ++G  P     N ++ SLC  G++  A   
Sbjct: 501 KTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSV 560

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           + E L KG + N+ +F+ LI+ FC+  D   A+  + ++ L         Y+   + L  
Sbjct: 561 LDEMLQKGISPNISSFSILIKAFCKACDF-SAVDEIFEIALNVCGHKEALYSLTFNELLV 619

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTA 584
            G V +A EL    L +        Y+ +I   C+  +++D   +L K++ K       +
Sbjct: 620 GGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPAS 679

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
           +  VI+ L   G   EA ++  K++  AS+ 
Sbjct: 680 FMPVIDGLGKRGNKHEADELAEKMMEMASEG 710



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 6/354 (1%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P +  Y  ++    + G +D    + + M   G  P T ++   +  LC +G   +ARE+
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
            +   E+   PN  ++ +++ G  R G  S+  +++ EM + GF P  V  N LI S C+
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM----YLCKKDP 512
           EGK D A+K + E    G + +VV F + I   C  G + EA  +  DM     L    P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           + +TY  ++    K G +EEA  L  KM     +    +Y   +    ++G++ +   +L
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 573 EKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           ++M  +  +    +YN V++ LC  G L +A  ++  +  +    D  T   L+  Y + 
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           G    A  V   M      P+   C  +   L  EG+  EA+ L+ +  E+G++
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYV 372



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 11/277 (3%)

Query: 131 ADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
           +D + +   D I Y  ++  L K      AK+    M  + ++     +   + ++ + G
Sbjct: 423 SDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEG 482

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           K+ +A  VL  M+K      L   N+ I  L   N++ +    ++ M+  G++P+V  YN
Sbjct: 483 KISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYN 542

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN- 309
            ++   C+  R+KDA  ++DEM  KG SP+  S+  ++   CK      V ++ E  +N 
Sbjct: 543 NVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNV 602

Query: 310 -------DSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                   S  F++    G + +AKEL               Y  +++  C+  +LD A 
Sbjct: 603 CGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDAS 662

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
            +L ++   G   +  S+   ++GL   G   EA E+
Sbjct: 663 GILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADEL 699


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 266/566 (46%), Gaps = 18/566 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMA-RRGIECRPEAFSYLMV--AYSRAGKLRNAM 196
           D + Y  +L+     K  + A  +L +MA  +G  C P   SY +V   +   G++  A 
Sbjct: 164 DVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAY 223

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   M    + PN++   T I  L     + +A    ++M   G+ P+  TYNCLI GY
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
             + + K+ +++++EM   G  PD  +Y +++ YLC   R +E R L + M+        
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNV 343

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  + +  +G + E  +L+N M + G  PD   +  +   + +   +D+A  +  +
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G  P+ V+Y A ++ LC  G+  +A    N    E   PN   ++ +++GL    K
Sbjct: 404 MKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             +A +   EM+ +G  P  V  N ++ +LC +G++  A++ +      G    V+++T+
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTT 523

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G C  G ++EA   LD M      PD  TY T++    + GR+++A  +  +ML  G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS--KQKCRTAYNQVIENLCSFGYLEEAG 602
           + P VVTY T++H      R  +  +L   M++  KQ     YN ++  L     ++EA 
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAF 643

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           K+   +     + + +T ++++ +    G    A  +   + +  L+PD+     ++E L
Sbjct: 644 KLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENL 703

Query: 663 ILEGKSEEADTLMLRFVERGHIQPKS 688
           I EG  EE D L    +E+    P S
Sbjct: 704 IEEGYLEEFDDL-FSAMEKSGTTPNS 728



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 152/591 (25%), Positives = 263/591 (44%), Gaps = 68/591 (11%)

Query: 159 GAKRVLRLMARRGIECRPE---AFSYLMVAYSRAGKLRNAM----YVLSMMQKAA----- 206
           G    L+L        RP    AF++L+ A SR    R++      V+S+  +       
Sbjct: 29  GLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTI 88

Query: 207 -VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            V P+    +  I       +L         +  +G   N +  N L+KG CD  R+ +A
Sbjct: 89  KVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEA 148

Query: 266 IK-LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------- 311
           +  L+  MP  GC+PD VSY T++   C EKR +E  +L+  M +               
Sbjct: 149 MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAI 208

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK---------- 359
             N F  +G++++A  L  +M   G  P+VVTYT V++G C+   +D+A+          
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 360 -------------------------KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
                                    +ML++M  HG KP+  +Y + LN LC+NG+  EAR
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            + ++   +   PN   Y +++HG   +G LSE  D++  MV+ G  P     N++  + 
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            ++  +D A     +   +G + +VVN+ +LI   C+ G +++A+   + M      P+ 
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC---QVGRVEDLLKL 571
             + +++  L    + E+A E   +ML++G+ P VV + T++   C   QV + + L+ L
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 572 LEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +E++ ++     +Y  +I   C  G ++EA K L  +L    K D  T + L+  Y   G
Sbjct: 509 MERVGTRPGV-ISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
               AY V   M    + P +     +   L    +  EA  L L  +  G
Sbjct: 568 RIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 146/347 (42%), Gaps = 12/347 (3%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +Q     D + Y  +++ L K      A      M   G+      F+ L+       K 
Sbjct: 405 KQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKW 464

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A      M    + P+++  NT +  L    ++ KA R ++ M+  G  P V++Y  L
Sbjct: 465 EKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTL 524

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-- 310
           I G+C + RI +A K +D M   G  PD+ +Y T++   C+  RI +   +  +M+ +  
Sbjct: 525 IGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGI 584

Query: 311 -------SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                  S + H      R  EAKEL   M   G   ++  Y  ++NG  +   +D+A K
Sbjct: 585 TPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFK 644

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           + Q +     +    ++   +  L  +G++ +A  +  T       P+  TY ++   L 
Sbjct: 645 LFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLI 704

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
            EG L E  D+   M K G  P    +N L++ L   G +  A  ++
Sbjct: 705 EEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYL 751



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 134/314 (42%), Gaps = 20/314 (6%)

Query: 160 AKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           AK     M  +GI  RP+   F+ ++      G++  A  ++ +M++    P ++   T 
Sbjct: 467 AKEFYFEMLNQGI--RPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTL 524

Query: 218 I--HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
           I  H LV   ++ +A + L+ M   G+ P+  TYN L+ GYC   RI DA  +  EM   
Sbjct: 525 IGGHCLV--GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRN 582

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEA 323
           G +P  V+Y T++  L   +R  E ++L   M+               N       ++EA
Sbjct: 583 GITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEA 642

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
            +L   +       ++ T+  ++    + G  + A  +   +  +G  P+  +Y      
Sbjct: 643 FKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAEN 702

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           L   G   E  ++ +  E+   TPN+   + ++  L   G ++ A   + ++ +K F   
Sbjct: 703 LIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLE 762

Query: 444 PVEINLLIQSLCRE 457
                +LI  L R+
Sbjct: 763 ASTTAMLISLLSRD 776



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 124/309 (40%), Gaps = 16/309 (5%)

Query: 128 FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVA 185
           FY+       R D + +  +L  L        A+R++ LM R G   RP   SY  L+  
Sbjct: 470 FYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGT--RPGVISYTTLIGG 527

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
           +   G++  A   L +M    + P+    NT +H      ++  A      M   GITP 
Sbjct: 528 HCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPG 587

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           V+TY+ ++ G     R  +A +L   M   G   +   Y  ++  L K   + E   L +
Sbjct: 588 VVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQ 647

Query: 306 KM--------VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
            +        +   N+        GR E+A  L   +S  G +PDV TY  +       G
Sbjct: 648 SLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            L++   +   M   G  PN+    A +  L H G    A   +   +E+ ++  A T +
Sbjct: 708 YLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTA 767

Query: 414 VVMHGLRRE 422
           +++  L R+
Sbjct: 768 MLISLLSRD 776


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 160/594 (26%), Positives = 258/594 (43%), Gaps = 59/594 (9%)

Query: 108 PRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRL 166
           P     VL S +   RVAL+FF W   Q  ++    V+  +L+IL    L   A  V+  
Sbjct: 85  PHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVME- 143

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
                   R  +F    V           + V   M +  + P++  CN  + VL   N 
Sbjct: 144 --------RVVSFEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENL 195

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L+KA      M+  GI P V+TYN ++  YC   R+  A++L+ EM  +GC P+ V+Y  
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMG 334
           ++  L K+  +++ + L+E+M+N              N F  +G   EA +LV +M    
Sbjct: 256 LVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P + TY  ++ G C+  ++   +     M      P+ VS+ + L G C  G   EA 
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAF 375

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            + +  +     P  ITY+ ++HGL   G L  A  + +EM  +G FP      +L+   
Sbjct: 376 LLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGC 435

Query: 455 CREGKMDGAKKFMQECLNKGC-----------------------------------AVNV 479
            + G +  A+ F  E L+KG                                      +V
Sbjct: 436 FKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDV 495

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           + +   +   CQ+G+ EEA  LL++M      PD VTYT+II+   KNG + +A E+  +
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGY 597
           MLSKG+ P+VVTY  +IH +     ++       KML K        YN +I  LC    
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           ++EA K   ++       +  +  +L+    N G    A ++   M +R + PD
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPD 669



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 181/376 (48%), Gaps = 18/376 (4%)

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
           D+  + +AK +   M Q G  P VVTY  +++ +C+ G +DQA ++L +M   GC PN V
Sbjct: 192 DENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDV 251

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y   +NGL   G+  +A+ +I          +A TY+ +++G  ++G   EA D+V EM
Sbjct: 252 TYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEM 311

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           V +  FPT    N L+  LC+  ++ G +    + L      ++V+F SL+ G+C+ G +
Sbjct: 312 VNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCI 371

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            EA  L D++      P  +TY T+I  L   G ++ A  L  +M  +GL P + TY  +
Sbjct: 372 SEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTIL 431

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           ++   ++G V        +MLSK  +  R AYN  I           A  +  ++L    
Sbjct: 432 VNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGF 491

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             D  T +V V +   +G     ++ AC +   N++ D  +   V+   I+ G       
Sbjct: 492 PPDVITYNVFVHALCQQG----NFEEACDLL-ENMVSDGLIPDHVTYTSIING------- 539

Query: 674 LMLRFVERGHIQPKSE 689
               FV+ GH++   E
Sbjct: 540 ----FVKNGHLRKARE 551



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 165/354 (46%), Gaps = 23/354 (6%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +F+ L+  Y R G +  A  +   ++   + P ++  NT IH L +   L  ALR  + M
Sbjct: 357 SFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEM 416

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G+ P++ TY  L+ G   L  +  A    +EM  KG  PD+ +Y T           
Sbjct: 417 TDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT----------- 465

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
              R + E  + D+++         A  +  +M   G  PDV+TY   V+  C+ G  ++
Sbjct: 466 ---RIVGEMKIADTSV---------AFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEE 513

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  +L+ M   G  P+ V+YT+ +NG   NG   +ARE+ N    +   P+ +TY+V++H
Sbjct: 514 ACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIH 573

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
               +  L  A     +M++K      +  N +I  LC   +MD A K+  E   KG   
Sbjct: 574 AHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILP 633

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
           N  ++T LI   C  G  EEAL L  +M   K  PD+ T++  +  L ++ +V 
Sbjct: 634 NKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH 687



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 165/361 (45%), Gaps = 2/361 (0%)

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           + ++M + G +PDV     ++        L +AK +   M   G KP  V+Y   L+  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G+  +A E+++  +E    PN +TY+V+++GL ++G+L +A  ++ EM+  G   +  
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N LI   C++G    A   ++E +N+     +  + +L+ G C+   +        DM
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
              K  PD V++ +++    + G + EA  L  ++  + LVPTV+TY T+IH  C  G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 566 EDLLKLLEKMLSKQKCRTAYN-QVIENLC-SFGYLEEAGKILGKVLRTASKADASTCHVL 623
           +  L+L ++M  +      +   ++ N C   GY+  A     ++L    K D    +  
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +   +      +A+ +   M      PD+         L  +G  EEA  L+   V  G 
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 684 I 684
           I
Sbjct: 527 I 527



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 14/175 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGK--LRNAMY 197
           D + Y  ++    K    + A+ V   M  +G+   P   +Y ++ ++ A K  L  A  
Sbjct: 529 DHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVA--PSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
             S M + +V  N++  N  I+ L +  ++ +A ++ + M+  GI PN  +Y  LI   C
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESC 646

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSY----------YTVMGYLCKEKRIKEVRD 302
           ++   ++A++L  EM  +   PD  ++          Y V    C E  I+ V D
Sbjct: 647 NMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNVED 701


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 259/523 (49%), Gaps = 29/523 (5%)

Query: 167 MARRGIECRPEA----FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           + R  I  RP      FS L  A ++  +    + +   M+   +A NL   +  I+   
Sbjct: 173 LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 232

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              KL  A   + ++   G  PN +T++ LI G C   R+ +A++L+D M   G  PD +
Sbjct: 233 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 292

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           +  T++  LC                         G+  EA  L+++M + GC P+ VTY
Sbjct: 293 TINTLVNGLCL-----------------------SGKEAEAMLLIDKMVEYGCQPNAVTY 329

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             V+N  C+ G+   A ++L++M     K + V Y+  ++GLC +G    A  + N  E 
Sbjct: 330 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 389

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
           +  T N ITY++++ G    G+  +   ++R+M+K+   P  V  ++LI S  +EGK+  
Sbjct: 390 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 449

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A++  +E +++G A + + +TSLI GFC++  L++A  ++D M     DP+  T+  +I+
Sbjct: 450 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 509

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--K 580
              K  R+++  EL  KM  +G+V   VTY T+I  +C++G++    +L ++M+S++   
Sbjct: 510 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 569

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               Y  +++ LC  G  E+A +I  K+ ++  + D    ++++    N      A+ + 
Sbjct: 570 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 629

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           C +  + + P +K    +   L  +G   EA+ L  +  E GH
Sbjct: 630 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 672



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 235/505 (46%), Gaps = 16/505 (3%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I +  +   ++KTK       + + M  +GI       S ++  + R  KL  A   +  
Sbjct: 187 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 246

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           + K    PN +  +T I+ L +  ++++AL  ++RM   G  P+++T N L+ G C   +
Sbjct: 247 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 306

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD----- 316
             +A+ LID+M   GC P+ V+Y  V+  +CK  +     +L+ KM  + N+  D     
Sbjct: 307 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYS 365

Query: 317 --------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                    G ++ A  L N+M   G   +++TY  ++ GFC  G  D   K+L+ M   
Sbjct: 366 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 425

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
              PN V+++  ++     GK  EA E+          P+ ITY+ ++ G  +E  L +A
Sbjct: 426 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 485

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             +V  MV KG  P     N+LI   C+  ++D   +  ++   +G   + V + +LI+G
Sbjct: 486 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 545

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           FC+ G L  A  L  +M   K  P+ VTY  ++D L  NG  E+A E+  K+    +   
Sbjct: 546 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 605

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
           +  Y  +IH  C   +V+D   L   +  K  +     YN +I  LC  G L EA  +  
Sbjct: 606 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 665

Query: 607 KVLRTASKADASTCHVLVESYLNKG 631
           K+       D  T ++L+ ++L  G
Sbjct: 666 KMEEDGHAPDGWTYNILIRAHLGDG 690



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 197/400 (49%), Gaps = 12/400 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y  +L ++ K+     A  +LR M  R I+     +S ++    + G L NA  + 
Sbjct: 325 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 384

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M+   +  N++  N  I       +     + L  M    I PNV+T++ LI  +   
Sbjct: 385 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE 444

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNL--- 313
            ++++A +L  EM  +G +PD ++Y +++   CKE  + +   +++ MV+   D N+   
Sbjct: 445 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 504

Query: 314 ------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                 +    RI++  EL  +MS  G + D VTY  ++ GFC +G+L+ AK++ Q+M  
Sbjct: 505 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 564

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
               PN V+Y   L+GLC NG+S +A E+    E+     +   Y++++HG+    K+ +
Sbjct: 565 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 624

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A D+   +  KG  P     N++I  LC++G +  A+   ++    G A +   +  LIR
Sbjct: 625 AWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIR 684

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
                GD  +++ L++++  C    D  T   +ID LS +
Sbjct: 685 AHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDD 724



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 193/419 (46%), Gaps = 32/419 (7%)

Query: 302 DLMEKMV-NDSNLFHDQG--------RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           D + +MV ND NL + +         + ++A +L   M     +P V+ ++ + +   + 
Sbjct: 140 DFIARMVANDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKT 199

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
            + D    + +QM   G   N  + +  +N  C   K   A   +    +  + PN IT+
Sbjct: 200 KQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITF 259

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           S +++GL  EG++SEA ++V  MV+ G  P  + IN L+  LC  GK   A   + + + 
Sbjct: 260 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 319

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            GC  N V +  ++   C+ G    A+ LL  M       D V Y+ IID L K+G ++ 
Sbjct: 320 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 379

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIE 590
           A  L  +M  KG+   ++TY  +I  +C  GR +D  KLL  M+ ++       ++ +I+
Sbjct: 380 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 439

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLV-----ESYLNKGIPLLAYKVA----- 640
           +    G L EA ++  +++      D  T   L+     E++L+K   ++   V+     
Sbjct: 440 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 499

Query: 641 -CRMFN--------RNLIPD-LKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
             R FN         N I D L+L +K+S R ++   +   +TL+  F E G +    E
Sbjct: 500 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVV-ADTVTYNTLIQGFCELGKLNVAKE 557



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 65/154 (42%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y ++L+ L      + A  +   + +  +E     ++ ++     A K+ +A  +   
Sbjct: 572 VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 631

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           +    V P +   N  I  L     L++A     +M+  G  P+  TYN LI+ +     
Sbjct: 632 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 691

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
              ++KLI+E+   G S D  +   V+  L  +K
Sbjct: 692 ATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDK 725


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/494 (28%), Positives = 241/494 (48%), Gaps = 28/494 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  ++  L K    + A+  +  + + G        + L++ + R   LR+A+ V  +
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDV 255

Query: 202 MQK-AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           M K    APN +  +  IH L    +L +A    ++M   G  P+  TY  LIK  CD  
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
            I  A  L DEM  +GC P+  +Y  ++  LC++ +I+E   +  KMV D        RI
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD--------RI 367

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
                           P V+TY A++NG+C+ G +  A ++L  M    CKPN  ++   
Sbjct: 368 ---------------FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           + GLC  GK  +A  ++    +   +P+ ++Y+V++ GL REG ++ A  ++  M     
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  +    +I + C++GK D A  F+   L KG +++ V  T+LI G C+ G   +AL 
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           +L+ +   +      +   I+D LSK  +V+E   ++ K+   GLVP+VVTY T++    
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592

Query: 561 QVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           + G +    ++LE ++    C      Y  +I  LC FG +EEA K+L  +  +    + 
Sbjct: 593 RSGDITGSFRILE-LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651

Query: 618 STCHVLVESYLNKG 631
            T  V+V+ Y+N G
Sbjct: 652 VTYTVMVKGYVNNG 665



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 152/629 (24%), Positives = 285/629 (45%), Gaps = 50/629 (7%)

Query: 99  LRNLLRSLKPRQICAVLRSQ-ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
           L++L+  + P     V+  Q +D  + ++FF W  +   Y  DP     +L+++  + L 
Sbjct: 60  LKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLY 119

Query: 158 QGAKRVLRLMARRGIECRPE----------------------AFSYLMVAYSRAGKLRNA 195
           + A  V+  + +    C  E                       +S L+++ ++      A
Sbjct: 120 RVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLA 179

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
                 M+       ++   T ++ L        A  F+ ++   G   +      L+ G
Sbjct: 180 YVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLG 239

Query: 256 YCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           +C    ++DA+K+ D M  +  C+P+ VSY  ++  LC                      
Sbjct: 240 FCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLC---------------------- 277

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
            + GR+EEA  L +QM + GC P   TYT ++   C  G +D+A  +  +M   GCKPN 
Sbjct: 278 -EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNV 336

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +YT  ++GLC +GK  EA  +     ++   P+ ITY+ +++G  ++G++  A +++  
Sbjct: 337 HTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTV 396

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M K+   P     N L++ LCR GK   A   ++  L+ G + ++V++  LI G C++G 
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           +  A  LL  M     +PD +T+T II+A  K G+ + A+  +  ML KG+    VT  T
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I   C+VG+  D L +LE ++  +   T +  N +++ L     ++E   +LGK+ +  
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
                 T   LV+  +  G    ++++   M     +P++     +   L   G+ EEA+
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636

Query: 673 TLMLRFVERGHIQPKSEEHLQRQRVFLNS 701
            L+    + G + P    +    + ++N+
Sbjct: 637 KLLSAMQDSG-VSPNHVTYTVMVKGYVNN 664



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 227/490 (46%), Gaps = 71/490 (14%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +L +M +R  +     F+ LM    R GK   A+++L  M    ++P+++  N  I 
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L     +  A + L  M    I P+ LT+  +I  +C   +   A   +  M  KG S 
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMV--------NDSNLFHDQ----GRIEEAKELV 327
           D+V+  T++  +CK  + ++   ++E +V        +  N+  D      +++E   ++
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML 569

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +++++G +P VVTYT +V+G  R G++  + ++L+ M   GC PN   YT  +NGLC  
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQF 629

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G+  EA ++++  ++   +PN +TY+V++ G    GKL  A + VR MV++G+       
Sbjct: 630 GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIY 689

Query: 448 NLLIQSLCREGK-MDGAKKFM----------QECLNK---------GCAVNVVNFTSLIR 487
           + L+Q      K +D +++             EC+N+         GC   +  F  L+ 
Sbjct: 690 SSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF--LVT 747

Query: 488 GFCQKGD-----------------LEEALSLLDDMYLCKKD-----------------PD 513
             C++G                  LE+A+ ++ + Y  KK                  P 
Sbjct: 748 RLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPS 807

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKML-SKGLV--PTVVTYRTVIHRYCQVGRVEDLLK 570
             ++  +I  L K G  E A EL+M++L S G+V    V+TY   +    + G   +++ 
Sbjct: 808 FKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVID 867

Query: 571 LLEKMLSKQK 580
           L++++  +++
Sbjct: 868 LVDQLHCRER 877



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 154/330 (46%), Gaps = 37/330 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D +    +++ + K    + A  +L  + +  I   P + + ++   S+  K++  + +L
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML 569

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + K  + P+++   T +  L+    +  + R LE M+L+G  PNV  Y  +I G C  
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQF 629

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVM--GYLCK---EKRIKEVRDLMEKM--VND-- 310
            R+++A KL+  M   G SP+ V+ YTVM  GY+     ++ ++ VR ++E+   +ND  
Sbjct: 630 GRVEEAEKLLSAMQDSGVSPNHVT-YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRI 688

Query: 311 -SNLFH----DQGRIEEAK------------------ELVNQMSQM-GCIPDVVTYTAVV 346
            S+L       Q  I+ ++                  EL++ + Q+ GCI  +  +  +V
Sbjct: 689 YSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF--LV 746

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
              C+ G  D++  ++Q +   G      +    +   C   K  +  E+I    +  + 
Sbjct: 747 TRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFV 805

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMV 436
           P+  ++ +V+ GL++EG    A ++V E++
Sbjct: 806 PSFKSFCLVIQGLKKEGDAERARELVMELL 835


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 160/594 (26%), Positives = 258/594 (43%), Gaps = 59/594 (9%)

Query: 108 PRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRL 166
           P     VL S +   RVAL+FF W   Q  ++    V+  +L+IL    L   A  V+  
Sbjct: 85  PHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVME- 143

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
                   R  +F    V           + V   M +  + P++  CN  + VL   N 
Sbjct: 144 --------RVVSFEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENL 195

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L+KA      M+  GI P V+TYN ++  YC   R+  A++L+ EM  +GC P+ V+Y  
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMG 334
           ++  L K+  +++ + L+E+M+N              N F  +G   EA +LV +M    
Sbjct: 256 LVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P + TY  ++ G C+  ++   +     M      P+ VS+ + L G C  G   EA 
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAF 375

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            + +  +     P  ITY+ ++HGL   G L  A  + +EM  +G FP      +L+   
Sbjct: 376 LLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGC 435

Query: 455 CREGKMDGAKKFMQECLNKGC-----------------------------------AVNV 479
            + G +  A+ F  E L+KG                                      +V
Sbjct: 436 FKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDV 495

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           + +   +   CQ+G+ EEA  LL++M      PD VTYT+II+   KNG + +A E+  +
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGY 597
           MLSKG+ P+VVTY  +IH +     ++       KML K        YN +I  LC    
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           ++EA K   ++       +  +  +L+    N G    A ++   M +R + PD
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPD 669



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 181/376 (48%), Gaps = 18/376 (4%)

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
           D+  + +AK +   M Q G  P VVTY  +++ +C+ G +DQA ++L +M   GC PN V
Sbjct: 192 DENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDV 251

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y   +NGL   G+  +A+ +I          +A TY+ +++G  ++G   EA D+V EM
Sbjct: 252 TYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEM 311

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           V +  FPT    N L+  LC+  ++ G +    + L      ++V+F SL+ G+C+ G +
Sbjct: 312 VNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCI 371

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            EA  L D++      P  +TY T+I  L   G ++ A  L  +M  +GL P + TY  +
Sbjct: 372 SEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTIL 431

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           ++   ++G V        +MLSK  +  R AYN  I           A  +  ++L    
Sbjct: 432 VNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGF 491

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             D  T +V V +   +G     ++ AC +   N++ D  +   V+   I+ G       
Sbjct: 492 PPDVITYNVFVHALCQQG----NFEEACDLL-ENMVSDGLIPDHVTYTSIING------- 539

Query: 674 LMLRFVERGHIQPKSE 689
               FV+ GH++   E
Sbjct: 540 ----FVKNGHLRKARE 551



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 165/354 (46%), Gaps = 23/354 (6%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +F+ L+  Y R G +  A  +   ++   + P ++  NT IH L +   L  ALR  + M
Sbjct: 357 SFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEM 416

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G+ P++ TY  L+ G   L  +  A    +EM  KG  PD+ +Y T           
Sbjct: 417 TDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT----------- 465

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
              R + E  + D+++         A  +  +M   G  PDV+TY   V+  C+ G  ++
Sbjct: 466 ---RIVGEMKIADTSV---------AFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEE 513

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  +L+ M   G  P+ V+YT+ +NG   NG   +ARE+ N    +   P+ +TY+V++H
Sbjct: 514 ACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIH 573

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
               +  L  A     +M++K      +  N +I  LC   +MD A K+  E   KG   
Sbjct: 574 AHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILP 633

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
           N  ++T LI   C  G  EEAL L  +M   K  PD+ T++  +  L ++ +V 
Sbjct: 634 NKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH 687



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 165/361 (45%), Gaps = 2/361 (0%)

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           + ++M + G +PDV     ++        L +AK +   M   G KP  V+Y   L+  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G+  +A E+++  +E    PN +TY+V+++GL ++G+L +A  ++ EM+  G   +  
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N LI   C++G    A   ++E +N+     +  + +L+ G C+   +        DM
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
              K  PD V++ +++    + G + EA  L  ++  + LVPTV+TY T+IH  C  G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 566 EDLLKLLEKMLSKQKCRTAYN-QVIENLC-SFGYLEEAGKILGKVLRTASKADASTCHVL 623
           +  L+L ++M  +      +   ++ N C   GY+  A     ++L    K D    +  
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +   +      +A+ +   M      PD+         L  +G  EEA  L+   V  G 
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 684 I 684
           I
Sbjct: 527 I 527



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 14/175 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGK--LRNAMY 197
           D + Y  ++    K    + A+ V   M  +G+   P   +Y ++ ++ A K  L  A  
Sbjct: 529 DHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVA--PSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
             S M + +V  N++  N  I+ L +  ++ +A ++ + M+  GI PN  +Y  LI   C
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESC 646

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSY----------YTVMGYLCKEKRIKEVRD 302
           ++   ++A++L  EM  +   PD  ++          Y V    C E  I+ V D
Sbjct: 647 NMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNVED 701


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 243/510 (47%), Gaps = 19/510 (3%)

Query: 176 PEAFSYLMVAYS--RAGK-LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           P+  SY  V     R G+ L  A ++   M    ++P+++  N+ I  L     + KA  
Sbjct: 200 PDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAV 259

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
            L RM   G  PN +T+N L+ GYC   +  DAI +   M   G  PD  +Y T+MGYLC
Sbjct: 260 VLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLC 319

Query: 293 KEKRIKEVRDLMEKMVNDSN---------LFHD---QGRIEEAKELVNQMSQMGCIPDVV 340
           K  R  E R + + MV   +         L H    +G + +   L++ M + G  PD  
Sbjct: 320 KNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHY 379

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
            +  ++  + + G++D A  +  +M   G  P+TV+Y   ++ LC  GK  +A       
Sbjct: 380 IFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRL 439

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
             E  TP+A+ +  ++HGL    K  +A ++  EM+ +G  P  +  N L+  LC+EG +
Sbjct: 440 ISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMV 499

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             AK      +      +V+ + +LI G+C  G ++EA  LL+ M L    P+ VTY T+
Sbjct: 500 ARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTM 559

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           I+   KNGR+E+A  L  +M SKG+ P +VTY T++    Q  R     +L   M+ K  
Sbjct: 560 INGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMI-KSG 618

Query: 581 CR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
            +     YN ++  LC     ++A +I   +       +  T ++++++ L  G    A 
Sbjct: 619 IKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAK 678

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGK 667
            +   +  R L+P++     + + LI +G 
Sbjct: 679 DLFASLLARGLVPNVVTYWLMMKSLIEQGL 708



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 131/544 (24%), Positives = 265/544 (48%), Gaps = 25/544 (4%)

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           R + ++AR  +      +S ++   SR G L  A   L  + ++      +  +  +  L
Sbjct: 77  RRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKAL 136

Query: 222 VVGNKLAKALRF-LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK----- 275
               + ++A+   L RM + G TPNV +Y  L+KG CD +R + A+ L+  M +      
Sbjct: 137 CDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRG 196

Query: 276 GCSPDKVSYYTVMGYLCKEKR-IKEVRDLMEKMVNDSNLFHD------------QGR-IE 321
           G  PD VSY TV+  L +E R +     L ++M+ D  L  D            + R ++
Sbjct: 197 GYPPDVVSYNTVINGLLREGRQLDTAYHLFDQML-DQGLSPDVVTYNSIISALSKARAMD 255

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +A  ++ +M + G +P+ +T+ ++++G+C  G+ + A  + ++M   G +P+  +Y   +
Sbjct: 256 KAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLM 315

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
             LC NG+S+EAR++ ++  +    PN+ TY  ++HG   EG L +   ++  MV+ G  
Sbjct: 316 GYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQ 375

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P     N+LI +  + GK+D A     +   +G   + V +  ++   C  G +++A++ 
Sbjct: 376 PDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQ 435

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
              +      PD V +  +I  L    + ++A EL ++M+ +G+ P  + + T+++  C+
Sbjct: 436 FGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCK 495

Query: 562 ---VGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
              V R +++  L+ + +  Q+    YN +I+  C  G ++EA K+L  ++    K +  
Sbjct: 496 EGMVARAKNIFDLMVR-VDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEV 554

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           T + ++  Y   G    A+ +  +M ++ + P +     + + L    ++  A  L L  
Sbjct: 555 TYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWM 614

Query: 679 VERG 682
           ++ G
Sbjct: 615 IKSG 618



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 133/538 (24%), Positives = 245/538 (45%), Gaps = 15/538 (2%)

Query: 109 RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLE-ILSKTKLCQGAKRVLRLM 167
           + +C   RSQ    +        D +  Y  D + Y  ++  +L + +    A  +   M
Sbjct: 170 KGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQM 229

Query: 168 ARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
             +G+      ++ ++ A S+A  +  A  VL  M K    PN +  N+ +H      K 
Sbjct: 230 LDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKP 289

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
             A+   +RM   G+ P+V TYN L+   C   R  +A K+ D M  +G  P+  +Y T+
Sbjct: 290 NDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTL 349

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGC 335
           +     E  + ++  L++ MV +               +   G++++A  L ++M + G 
Sbjct: 350 LHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGL 409

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PD VTY  V++  C VG++D A     ++   G  P+ V +   ++GLC   K  +A E
Sbjct: 410 NPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEE 469

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +          PN I ++ +++ L +EG ++ A ++   MV+       +  N LI   C
Sbjct: 470 LAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYC 529

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
             GK+D A K ++  +  G   N V + ++I G+C+ G +E+A SL   M     +P  V
Sbjct: 530 LHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIV 589

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK- 574
           TY+TI+  L +  R   A EL + M+  G+   + TY  ++   CQ    +D L++ +  
Sbjct: 590 TYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNL 649

Query: 575 -MLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            ++        +N +I+ L   G  +EA  +   +L      +  T  ++++S + +G
Sbjct: 650 YLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 707



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 228/479 (47%), Gaps = 20/479 (4%)

Query: 163 VLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
           V + M R G+E  P+ F+Y  LM    + G+   A  +   M K    PN     T +H 
Sbjct: 295 VFKRMCRDGVE--PDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHG 352

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
                 L K    L+ M   GI P+   +N LI  Y    ++ DA+ L  +M  +G +PD
Sbjct: 353 YATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPD 412

Query: 281 KVSYYTVMGYLCKEKRIKEV-----RDLMEKMVNDS----NLFHD---QGRIEEAKELVN 328
            V+Y  VM  LC   ++ +      R + E +  D+    NL H    + + ++A+EL  
Sbjct: 413 TVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAV 472

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +M   G  P+ + +  ++N  C+ G + +AK +   M     + + ++Y   ++G C +G
Sbjct: 473 EMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHG 532

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K  EA +++     +   PN +TY+ +++G  + G++ +A  + R+M  KG  P  V  +
Sbjct: 533 KVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYS 592

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            ++Q L +  +   AK+     +  G   ++  +  ++ G CQ    ++AL +  ++YL 
Sbjct: 593 TILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLI 652

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
               +  T+  +IDAL K GR +EA +L   +L++GLVP VVTY  ++    + G +E+L
Sbjct: 653 DFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEEL 712

Query: 569 LKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
             L    L K  C       N ++  L   G + +AG  L K+       +AST   LV
Sbjct: 713 DDLFLS-LEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLV 770



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 146/330 (44%), Gaps = 23/330 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D +V+  ++  L        A+ +   M  RGI      F+ L+    + G +  A  + 
Sbjct: 447 DAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIF 506

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +  V  +++  NT I    +  K+ +A + LE M L G+ PN +TYN +I GYC  
Sbjct: 507 DLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKN 566

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            RI+DA  L  +M  KG +P  V+Y T++  L + +                       R
Sbjct: 567 GRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQAR-----------------------R 603

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
              AKEL   M + G   D+ TY  ++ G C+    D A ++ Q +Y         ++  
Sbjct: 604 TAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNI 663

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++ L   G+  EA+++  +       PN +TY ++M  L  +G L E  D+   + K G
Sbjct: 664 MIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNG 723

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
                  +N L+  L ++G++  A  ++ +
Sbjct: 724 CTANSRMLNALVGKLLQKGEVRKAGVYLSK 753



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 135/295 (45%), Gaps = 47/295 (15%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK----MDG 462
           PN ITYSVV+    R G L  A   +  +++ G+    +  + L+++LC + +    MD 
Sbjct: 89  PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD-----PDTVTY 517
           A + M      GC  NV ++T L++G C +   ++AL LL  M +         PD V+Y
Sbjct: 149 ALRRMPVL---GCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSY 205

Query: 518 TTIIDALSKNGR-VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
            T+I+ L + GR ++ A  L  +ML +GL P VVTY ++I                   L
Sbjct: 206 NTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSII-----------------SAL 248

Query: 577 SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
           SK +                 +++A  +L ++++  +  +  T + L+  Y + G P  A
Sbjct: 249 SKARA----------------MDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDA 292

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
             V  RM    + PD+     +   L   G+S EA  +    V+RGH +P S  +
Sbjct: 293 IGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGH-KPNSATY 346


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 184/720 (25%), Positives = 309/720 (42%), Gaps = 102/720 (14%)

Query: 43  SDDHFMVLDSFDKYRVNREEIRRVVLEE--DEFRHPLVREVCRLIE--LRSAWSPKLEGE 98
           S+ HF   D FDK     + +R +V E+  D+FR      +  L +  L   W+ ++  E
Sbjct: 59  SNRHFHNFDCFDK-----DSVREIVREQRWDDFR------IVSLFDSALAPIWASRVLVE 107

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           L                    D R+AL+FF WA  +  ++H    Y +++ IL   +   
Sbjct: 108 LCQ------------------DARLALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYS 149

Query: 159 GAKRVLR-----------------LMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVL 199
            A  VL+                 L A R + C P    F  L  A    G L  A    
Sbjct: 150 DANAVLKELICLRRVLPSWDVFDLLWATRNV-CVPGFGVFDALFSALIELGMLEEASECF 208

Query: 200 SMMQKAAVAPNLLICNTAIHVLV-VG---------------------------------- 224
             M+K  V P    CN  +H L  VG                                  
Sbjct: 209 LKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKE 268

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             L  A     +M+ AG TP+++TYN LI G+  L  + + I + ++M    C PD ++Y
Sbjct: 269 GDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITY 328

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
             ++   CK +R+ +  + + +M  +             + F  +G ++EA +    M +
Sbjct: 329 NALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR 388

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           +   P+  TYT++++  C+ G L +A K+++++   G K N V+YTA L+GLC  G+  E
Sbjct: 389 VALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKE 448

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A E+          PN  TY+ ++HG  +  ++  A D+++EM +K   P  +    ++ 
Sbjct: 449 AEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILW 508

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC E +++ AK  + E    G   N V +T+L+  + + G   EAL+LL++M       
Sbjct: 509 GLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIA 568

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
             VTY  +ID L K+G V+EA     +M   GL P V  Y  ++   C+    E   KL 
Sbjct: 569 TEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLF 628

Query: 573 EKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           ++ML K     + AY  +I+     G L+EA  +  +++    + D      L+    + 
Sbjct: 629 DEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHS 688

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEE 690
           G    A  +   M  + ++PD  +   + ++    GK +EA  L     +RG I   S+ 
Sbjct: 689 GQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDH 748


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 149/572 (26%), Positives = 261/572 (45%), Gaps = 33/572 (5%)

Query: 115 LRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIEC 174
           LR ++   +AL FF        ++H P+ + +M+  L+        + +L+ M  +G  C
Sbjct: 49  LRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC 108

Query: 175 RPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
             + F  ++  Y + G    A+ +   +++    P++ I N  +  L+  N++       
Sbjct: 109 SEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY 168

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
             M+  G  PNV TYN L+K  C  +++  A KL+ EM  KGC P+ VSY TV+  +C+ 
Sbjct: 169 RDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEV 228

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
             +KE R L E             R E               P V  Y A++NG C+  +
Sbjct: 229 GMVKEGRQLAE-------------RFE---------------PVVSVYNALINGLCKERD 260

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
                +++ +M   G  PN +SY+  +N L ++G+   A  ++    +    PN  T S 
Sbjct: 261 YKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSS 320

Query: 415 VMHGLRREGKLSEACDVVREMVKK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           ++ G    G   +A D+  +M++  G  P  V  N L+Q  C  G +D A          
Sbjct: 321 LVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEI 380

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           GC+ N+  + SLI GF ++G LE A+ + + M      P+ V YT++++AL ++ + +EA
Sbjct: 381 GCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEA 440

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIE 590
             L+  M  +   P+V T+   I   C  GR++   K+  +M  + +C      YN++++
Sbjct: 441 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLD 500

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            L     +EEA  +  ++     +   ST + L+    N G+P +A ++  +M      P
Sbjct: 501 GLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSP 560

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           D      +      +GK+E A   ML  V  G
Sbjct: 561 DEITMNMIILAYCKQGKAERA-VQMLDLVSCG 591



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 224/481 (46%), Gaps = 28/481 (5%)

Query: 119 ADERVALQFFYWAD-RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
            + R+ + +  + D ++  +  +   Y ++L+ L K     GAK++L  M+ +G  C P 
Sbjct: 157 GENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG--CCPN 214

Query: 178 AFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
           A SY  V  S    G ++    +    +     P + + N  I+ L         +  + 
Sbjct: 215 AVSYTTVISSMCEVGMVKEGRQLAERFE-----PVVSVYNALINGLCKERDYKGGVELMS 269

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            M   GI+PNV++Y+ LI    +  +I+ A  L+ +M  +GC P+  +  +++       
Sbjct: 270 EMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRG 329

Query: 296 RIKEVRDLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
              +  D+  +M+    L             F   G I++A  +   M ++GC P++ TY
Sbjct: 330 TTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTY 389

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
            +++NGF + G L+ A  +  +M   GC PN V YT+ +  LC + K  EA  +I    +
Sbjct: 390 GSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSK 449

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK-GFFPTPVEINLLIQSLCREGKMD 461
           E   P+  T++  + GL   G+L  A  V R+M ++    P  V  N L+  L +  +++
Sbjct: 450 ENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIE 509

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A    +E   +G   +   + +L+ G C  G    AL L+  M +  K PD +T   II
Sbjct: 510 EAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMII 569

Query: 522 DALSKNGRVEEATELMMKMLSKG---LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            A  K G+ E A + M+ ++S G     P V++Y  VI   C+    ED + L E+M+S+
Sbjct: 570 LAYCKQGKAERAVQ-MLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISE 628

Query: 579 Q 579
           +
Sbjct: 629 R 629



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 214/445 (48%), Gaps = 32/445 (7%)

Query: 133 RQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
           RQ   R +P+V  Y  ++  L K +  +G   ++  M  +GI     ++S L+   S +G
Sbjct: 235 RQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSG 294

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM-QLAGITPNVLTY 249
           ++  A  +L+ M K    PN+   ++ +    V      AL    +M +  G+ PNV+ Y
Sbjct: 295 QIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAY 354

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N L++G+C    I  A+ +   M   GCSP+  +Y +++                     
Sbjct: 355 NTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLI--------------------- 393

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             N F  +G +E A  + N+M   GC P+VV YT++V   CR  +  +A+ +++ M    
Sbjct: 394 --NGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKEN 451

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW-WTPNAITYSVVMHGLRREGKLSEA 428
           C P+  ++ AF+ GLC  G+   A ++    E+++   PN +TY+ ++ GL +  ++ EA
Sbjct: 452 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEA 511

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             + RE+  +G   +    N L+   C  G    A + + + +  G + + +    +I  
Sbjct: 512 YGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILA 571

Query: 489 FCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           +C++G  E A+ +LD +   ++   PD ++YT +I  L ++   E+   L  +M+S+ ++
Sbjct: 572 YCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERII 631

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKL 571
           P +   R+V     ++    D+L L
Sbjct: 632 PIL---RSVCQEAARMTIPNDVLWL 653



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/319 (22%), Positives = 139/319 (43%), Gaps = 41/319 (12%)

Query: 406 TPN--AITYSVVMHGLRREGKLSEACDVVREMVKKGFFP-TPVEINLLIQSLCREGKMDG 462
           +PN   I  S V+  LR+E  +  A    + +     F  TP+   ++I+ L  +G++D 
Sbjct: 34  SPNHAEIKESAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDS 93

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL-------------------LD 503
            +  +Q+   +G   +   F S+I  + Q G  E A+ +                   LD
Sbjct: 94  VQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLD 153

Query: 504 DM---------YLCKKD-------PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            +         Y+  +D       P+  TY  ++ AL KN +V+ A +L+++M +KG  P
Sbjct: 154 TLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP 213

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGK 607
             V+Y TVI   C+VG V++  +L E+    +   + YN +I  LC     +   +++ +
Sbjct: 214 NAVSYTTVISSMCEVGMVKEGRQLAERF---EPVVSVYNALINGLCKERDYKGGVELMSE 270

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           ++      +  +   L+    N G   LA+ +  +M  R   P++     + +   + G 
Sbjct: 271 MVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGT 330

Query: 668 SEEADTLMLRFVERGHIQP 686
           + +A  +  + +    +QP
Sbjct: 331 TFDALDMWNQMIRGFGLQP 349


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 146/500 (29%), Positives = 252/500 (50%), Gaps = 29/500 (5%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G +  AM ++  M + +V+P+++  NT I+ L    KL +A+  L  M+ AG  PN +
Sbjct: 10  RNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSV 69

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           T   L+ G C   R+ +A++L++ M  KG   D V Y T++   C               
Sbjct: 70  TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFC--------------- 114

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                   + G ++  KEL ++M   G   +VVTY+ +V+G CR+G+  +A  +L  M  
Sbjct: 115 --------NNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAE 166

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           HG  P+ V+YT  ++GLC +G++  A +++N   E+   P+ +TY+V++ GL +EG + +
Sbjct: 167 HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVID 226

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL-NKGC-AVNVVNFTSL 485
           A  ++R M++KG     V  N L++ LC +GK+D A K       N+ C   NV  F  L
Sbjct: 227 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 286

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G C++G L +A+ +   M       + VTY  ++    K G+++EA EL  ++L  G 
Sbjct: 287 IGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGF 346

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAG 602
           VP   TY  +I  +C++ R+ ++ K L   +       A   YN ++ +LC  G LE+A 
Sbjct: 347 VPNSFTYSILIDGFCKM-RMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 405

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
            +  ++     + D  + + +++  L  G      ++  +M    L PD      +  RL
Sbjct: 406 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 465

Query: 663 ILEGKSEEADTLMLRFVERG 682
              G+ +EA + + R V  G
Sbjct: 466 SKLGELDEAKSALERMVASG 485



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 250/525 (47%), Gaps = 59/525 (11%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  ++R M R+ +     +++ L+    +A KL+ A+ +L  M+ A   PN + C T + 
Sbjct: 17  AMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMD 76

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    ++ +A+  LE M+  G   +V+ Y  LI G+C+   +    +L DEM  KG S 
Sbjct: 77  GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISA 136

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELV 327
           + V+Y  ++  LC+  + KE   ++  M         V  + L       GR   A +L+
Sbjct: 137 NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLL 196

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           N M + G  P  VTY  +++G C+ G +  A K+L+ M   G K + V+Y   + GLC  
Sbjct: 197 NLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDK 256

Query: 388 GKSLEAREMINT--SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
           GK  EA ++ N+    E    PN  T+++++ GL +EG+L++A  + R+MVKKG     V
Sbjct: 257 GKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLV 316

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF---------------- 489
             N+L+    + GK+  A +  ++ L+ G   N   ++ LI GF                
Sbjct: 317 TYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM 376

Query: 490 -------------------CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
                              C++G LE+A SL  +M     +PD +++ T+ID   K G  
Sbjct: 377 RTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDF 436

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQV 588
           +   EL MKM+  GL P  +T+ T+I+R  ++G +++    LE+M++      A  Y+ +
Sbjct: 437 QFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSL 496

Query: 589 IENLCSFGYLEEAGKIL------GKVL--RTASKADASTCHVLVE 625
           ++ L S G   E   +L      G VL  +  S      CH + E
Sbjct: 497 LKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQE 541



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/538 (26%), Positives = 245/538 (45%), Gaps = 55/538 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS--YLMVAYSRAGKLRNAMY 197
           D + Y  ++  L K K  + A  +L  M   G  C P + +   LM    + G++  AM 
Sbjct: 32  DIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG--CFPNSVTCTTLMDGLCKDGRMDEAME 89

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M+K     ++++  T I        L +     + M   GI+ NV+TY+CL+ G C
Sbjct: 90  LLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC 149

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND----SNL 313
            L + K+A  +++ M   G  PD V+Y  ++  LCK+ R     DL+  MV      SN+
Sbjct: 150 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 209

Query: 314 FH-------------------------------------------DQGRIEEAKELVNQM 330
            +                                           D+G+++EA +L N M
Sbjct: 210 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 269

Query: 331 -SQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
                C+ P+V T+  ++ G C+ G L +A K+ ++M   G   N V+Y   L G    G
Sbjct: 270 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAG 329

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K  EA E+     +  + PN+ TYS+++ G  +   L+ A  +  EM   G  P   + N
Sbjct: 330 KIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYN 389

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            L+ SLC+EG ++ AK   QE  N  C  ++++F ++I G  + GD +    L   M   
Sbjct: 390 TLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEM 449

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD +T++T+I+ LSK G ++EA   + +M++ G  P  + Y +++      G   ++
Sbjct: 450 GLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI 509

Query: 569 LKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           + LL +M +K     R   + ++  LC      +  ++L    +  S+  + +C+ L+
Sbjct: 510 INLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELL 567



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 177/348 (50%), Gaps = 5/348 (1%)

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           V+ G CR G + +A  ++++M      P+ VSY   +NGLC   K  EA  ++   E   
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             PN++T + +M GL ++G++ EA +++  M KKGF    V    LI   C  G +D  K
Sbjct: 64  CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           +   E L KG + NVV ++ L+ G C+ G  +EA ++L+ M      PD VTYT +ID L
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR-- 582
            K+GR   A +L+  M+ KG  P+ VTY  ++   C+ G V D  K+L  M+ K K    
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 243

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTAS--KADASTCHVLVESYLNKGIPLLAYKVA 640
             YN +++ LC  G ++EA K+   +    +  + +  T ++L+     +G    A K+ 
Sbjct: 244 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 303

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
            +M  +    +L     +    +  GK +EA  L  + ++ G + P S
Sbjct: 304 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFV-PNS 350



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 127/261 (48%), Gaps = 2/261 (0%)

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           ++V+ GL R G + EA  ++REM +K   P  V  N LI  LC+  K+  A   + E   
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            GC  N V  T+L+ G C+ G ++EA+ LL+ M     D D V Y T+I     NG ++ 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIE 590
             EL  +ML KG+   VVTY  ++H  C++G+ ++   +L  M           Y  +I+
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC  G    A  +L  ++    +    T +VL+     +G+ + A+K+   M  +    
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 651 DLKLCKKVSERLILEGKSEEA 671
           D+     + + L  +GK +EA
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEA 262



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 2/187 (1%)

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +N++++ LCR G +  A   ++E   K  + ++V++ +LI G C+   L+EA+ LL +M 
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                P++VT TT++D L K+GR++EA EL+  M  KG    VV Y T+I  +C  G ++
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 567 DLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
              +L ++ML K        Y+ ++  LC  G  +EA  +L  +       D  T   L+
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 625 ESYLNKG 631
           +     G
Sbjct: 181 DGLCKDG 187



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 8/191 (4%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSM 201
           Y  ++  L K    + AK + + M      C P+  +F+ ++    +AG  +    +   
Sbjct: 388 YNTLMASLCKEGSLEQAKSLFQEMGNA--NCEPDIISFNTMIDGTLKAGDFQFVKELQMK 445

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  + P+ L  +T I+ L    +L +A   LERM  +G TP+ L Y+ L+KG      
Sbjct: 446 MVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGD 505

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
             + I L+ +M  KG   D+    T++  LC   +  +V +L+      ++    +G   
Sbjct: 506 TTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTS----EGASI 561

Query: 322 EAKELVNQMSQ 332
              EL+ Q+ Q
Sbjct: 562 SCNELLMQLHQ 572


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 267/554 (48%), Gaps = 32/554 (5%)

Query: 107 KPRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGA----K 161
           +P+ +  VL + +    VAL+FF WA+RQ  ++   + Y ++L+IL++  L + A    +
Sbjct: 46  EPQLLVRVLNTVRHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVME 105

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           +V+ +    G+         L + Y++   L   + V   M    + P+L  CN  + +L
Sbjct: 106 KVVSVKMENGVVDVLILDLLLWI-YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLL 164

Query: 222 VVGNKLAKALRFLERMQL-AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
              +      R +  + +  GI P V+TYN ++  +C   ++++A++L+ +M   GC P+
Sbjct: 165 RDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPN 224

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
            V+Y  ++                       N     G +E+AKEL+ +M ++G      
Sbjct: 225 DVTYNVLV-----------------------NGLSHSGELEQAKELIQEMLRLGLEVSAY 261

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TY  ++ G+C  G+LD+A ++ ++M   G  P  V+Y   + GLC  G+  +AR++++  
Sbjct: 262 TYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVM 321

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
             +   P+ ++Y+ +++G  R G + EA  +  E+  +G  P+ V  N LI  LCR G +
Sbjct: 322 VNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDL 381

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D A +   E +  G   +V  FT L+RGFC+ G+L  A  L D+M      PD   Y T 
Sbjct: 382 DVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITR 441

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           I    K G   +A  +  +ML++G  P ++TY   I    ++G +++  +L++KML    
Sbjct: 442 IVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGL 501

Query: 581 C--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
                 Y  +I      G+L +A  +  ++L         T  VL+ SY  +G   LA  
Sbjct: 502 VPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAIL 561

Query: 639 VACRMFNRNLIPDL 652
               M  + + P++
Sbjct: 562 HFFEMHEKGVHPNV 575



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 258/523 (49%), Gaps = 39/523 (7%)

Query: 142 IVYYMMLE--ILSKTKLCQGAKRVLRLMARRG-------------IEC--RPEAFSY--L 182
           +V+Y M+   +L   K C    RVLRL+  R              +EC  RP   +Y  +
Sbjct: 140 LVFYKMVSKGMLPDLKNCN---RVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTM 196

Query: 183 MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
           + ++ + GK++ A+ +L  MQK    PN +  N  ++ L    +L +A   ++ M   G+
Sbjct: 197 LDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGL 256

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
             +  TY+ LI+GYC+  ++ +A +L +EM  +G  P  V+Y T+M  LCK  R+ + R 
Sbjct: 257 EVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARK 316

Query: 303 LMEKMVNDSNLFHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
           L++ MVN  NL  D              G I EA  L  ++   G +P VVTY  +++G 
Sbjct: 317 LLDVMVN-KNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGL 375

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           CR+G+LD A ++  +M  HG  P+  ++T  + G C  G    A+E+ +        P+ 
Sbjct: 376 CRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDR 435

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
             Y   + G  + G  S+A  +  EM+ +GF P  +  N+ I  L + G +  A + +++
Sbjct: 436 FAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKK 495

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            L  G   + V +TS+I      G L +A ++  +M      P  VTYT +I + +  GR
Sbjct: 496 MLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGR 555

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
           ++ A     +M  KG+ P V+TY  +I+  C+V +++   K   +M +K     +  Y  
Sbjct: 556 LKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTI 615

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           +I   C+ G+ +EA ++   +L    + D+ T H  +  +LNK
Sbjct: 616 LINENCNLGHWQEALRLYKDMLDREIQPDSCT-HSALLKHLNK 657



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 187/365 (51%), Gaps = 2/365 (0%)

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           I+ A+E+ N M + G  P VVTY  +++ FC+ G++ +A ++L QM   GC PN V+Y  
Sbjct: 171 IDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNV 230

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +NGL H+G+  +A+E+I          +A TY  ++ G   +G+L EA  +  EM+ +G
Sbjct: 231 LVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRG 290

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             PT V  N ++  LC+ G++  A+K +   +NK    ++V++ +LI G+ + G++ EA 
Sbjct: 291 AVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAF 350

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            L  ++      P  VTY T+ID L + G ++ A  L  +M+  G  P V T+  ++  +
Sbjct: 351 LLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGF 410

Query: 560 CQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C++G +    +L ++ML++  Q  R AY   I      G   +A  +  ++L      D 
Sbjct: 411 CKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDL 470

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLR 677
            T +V ++     G    A ++  +M    L+PD      +    ++ G   +A  + L 
Sbjct: 471 ITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLE 530

Query: 678 FVERG 682
            + +G
Sbjct: 531 MLSKG 535



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 187/380 (49%), Gaps = 12/380 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+   M  RG       ++ +M    + G++ +A  +L +M    + P+L+  NT I+
Sbjct: 279 ASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIY 338

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A      ++  G+ P+V+TYN LI G C +  +  A++L DEM   G  P
Sbjct: 339 GYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDP 398

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNLFHDQGRI---------EEAKELV 327
           D  ++  ++   CK   +   ++L ++M+N     + F    RI          +A  + 
Sbjct: 399 DVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQ 458

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M   G  PD++TY   ++G  ++G L +A +++++M ++G  P+ V+YT+ ++     
Sbjct: 459 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 518

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G   +AR +      +   P+ +TY+V++H     G+L  A     EM +KG  P  +  
Sbjct: 519 GHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 578

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N LI  LC+  KMD A KF  E   KG + N   +T LI   C  G  +EAL L  DM  
Sbjct: 579 NALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 638

Query: 508 CKKDPDTVTYTTIIDALSKN 527
            +  PD+ T++ ++  L+K+
Sbjct: 639 REIQPDSCTHSALLKHLNKD 658



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 164/365 (44%), Gaps = 47/365 (12%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K      A+++L +M  + +     +++ L+  Y+R G +  A  + + 
Sbjct: 296 VTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAE 355

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           ++   + P+++  NT I  L     L  A+R  + M   G  P+V T+  L++G+C L  
Sbjct: 356 LRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGN 415

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NL 313
           +  A +L DEM  +G  PD+ +Y T +    K     +   + E+M+           N+
Sbjct: 416 LPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNV 475

Query: 314 F----HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK----KMLQ-- 363
           F    H  G ++EA ELV +M   G +PD VTYT++++     G L +A+    +ML   
Sbjct: 476 FIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKG 535

Query: 364 -----------------------------QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
                                        +M+  G  PN ++Y A +NGLC   K  +A 
Sbjct: 536 IFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAY 595

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +     + +  +PN  TY+++++     G   EA  + ++M+ +   P     + L++ L
Sbjct: 596 KFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655

Query: 455 CREGK 459
            ++ K
Sbjct: 656 NKDYK 660



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 8/237 (3%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERV---ALQFFYWADR 133
           LVR  C+L  L  A   +L  E+ N  R L+P +   + R   + ++   +  F    + 
Sbjct: 406 LVRGFCKLGNLPMA--KELFDEMLN--RGLQPDRFAYITRIVGELKLGDPSKAFGMQEEM 461

Query: 134 QWR-YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
             R +  D I Y + ++ L K    + A  +++ M   G+      ++ ++ A+  AG L
Sbjct: 462 LARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHL 521

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
           R A  V   M    + P+++     IH   V  +L  A+     M   G+ PNV+TYN L
Sbjct: 522 RKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNAL 581

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           I G C + ++  A K   EM  KG SP+K +Y  ++   C     +E   L + M++
Sbjct: 582 INGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 638



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 74/144 (51%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+ V   M  +GI      ++ L+ +Y+  G+L+ A+     M +  V PN++  N  I+
Sbjct: 524 ARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALIN 583

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    K+ +A +F   MQ  GI+PN  TY  LI   C+L   ++A++L  +M  +   P
Sbjct: 584 GLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQP 643

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDL 303
           D  ++  ++ +L K+ +   VR L
Sbjct: 644 DSCTHSALLKHLNKDYKSHVVRHL 667


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 214/424 (50%), Gaps = 16/424 (3%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVL 199
           + +  ++  L K      A  +   M  RG  CRP+ ++Y  +     + G+   A  +L
Sbjct: 169 VTFTTLINWLCKVGKFAQAMELFDDMVARG--CRPDVYTYTTIINGLCKIGETAAAAGLL 226

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++A   PN++  +T I       ++ +AL     M++ GI+P++ TYN LI+G C+ 
Sbjct: 227 KKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNF 286

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VND 310
            + K+A  L++EM      PD V++  ++  +CKE ++ E + +++ M         V  
Sbjct: 287 SQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTY 346

Query: 311 SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           S+L +    +  + EA++L + M   GC PDV +Y  ++NG+C+V  +D+AK++  +M H
Sbjct: 347 SSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIH 406

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN VSY   ++GLC  G   EAR +          PN  TYS+++ G  ++G   +
Sbjct: 407 QGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGK 466

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  + R M      P  V  N+LI ++C+ G +  A+K   E   KG   N   +T++I 
Sbjct: 467 AFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIIN 526

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C++G L+EAL    +M      PD ++Y  II     +     A +L+ +M  KG + 
Sbjct: 527 GLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIA 586

Query: 548 TVVT 551
            V T
Sbjct: 587 DVGT 590



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 228/454 (50%), Gaps = 25/454 (5%)

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
           ++ +G      +   ++M+LAG++PN+ T + LI  +  L R+  A  ++ ++   G  P
Sbjct: 107 IVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQP 166

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
             V++ T++ +LCK                        G+  +A EL + M   GC PDV
Sbjct: 167 TIVTFTTLINWLCK-----------------------VGKFAQAMELFDDMVARGCRPDV 203

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            TYT ++NG C++GE   A  +L++M   GC+PN V+Y+  ++    + +  EA ++ + 
Sbjct: 204 YTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSY 263

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
            + +  +P+  TY+ ++ GL    +  EA  ++ EM      P  V  N+L+ ++C+EGK
Sbjct: 264 MKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGK 323

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +  A+  ++     G   +VV ++SL+ G+  + ++ EA  L D M      PD  +Y  
Sbjct: 324 VSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNI 383

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +I+   K  R++EA +L  +M+ +GL P  V+Y T+IH  CQ+G + +   L + M +  
Sbjct: 384 LINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNG 443

Query: 580 KCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
                  Y+ +++  C  GY  +A ++   +  T SK +    ++L+++    G    A 
Sbjct: 444 NLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDAR 503

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           K+   +F + L P+ ++   +   L  EG  +EA
Sbjct: 504 KLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEA 537



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 238/503 (47%), Gaps = 16/503 (3%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVV 223
            ++ R+ + C  + F+ L+ A  + G+  + +  L+  M+ A ++PN+   +  I+    
Sbjct: 87  HMLHRKPLPCIIQ-FTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSH 145

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
             ++  A   L ++   G+ P ++T+  LI   C + +   A++L D+M  +GC PD  +
Sbjct: 146 LQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYT 205

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHDQG---RIEEAKELVNQMS 331
           Y T++  LCK         L++KM         V  S +        R+ EA ++ + M 
Sbjct: 206 YTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMK 265

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
             G  PD+ TY +++ G C   +  +A  +L +M      P+ V++   ++ +C  GK  
Sbjct: 266 VKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVS 325

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           EA+ ++ T  E    P+ +TYS +M+G     ++ EA  +   M+ KG  P     N+LI
Sbjct: 326 EAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILI 385

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
              C+  ++D AK+   E +++G   N V++ +LI G CQ G L EA +L  +M+     
Sbjct: 386 NGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNL 445

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P+  TY+ ++D   K G   +A  L   M S    P +V Y  +I   C+ G + D  KL
Sbjct: 446 PNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKL 505

Query: 572 LEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
             ++  K  Q     Y  +I  LC  G L+EA +    +       D  + +V++  +L+
Sbjct: 506 FSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLH 565

Query: 630 KGIPLLAYKVACRMFNRNLIPDL 652
                 A ++   M ++  I D+
Sbjct: 566 HKDESRAVQLIGEMRDKGFIADV 588



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 208/412 (50%), Gaps = 12/412 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  + + G++     F+ L+    + GK   AM +   M      P++    T I+
Sbjct: 152 AFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIIN 211

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    + A A   L++M+ AG  PNV+TY+ +I  +    R+ +A+ +   M +KG SP
Sbjct: 212 GLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISP 271

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDSNLFHD----QGRIEEAKELV 327
           D  +Y +++  LC   + KE   L+ +M        +   N+  D    +G++ EA+ ++
Sbjct: 272 DIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVL 331

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
             M++MG  PDVVTY++++ G+    E+ +A+K+   M   GCKP+  SY   +NG C  
Sbjct: 332 KTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKV 391

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            +  EA+++ N    +  TPN ++Y+ ++HGL + G L EA ++ + M   G  P     
Sbjct: 392 KRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTY 451

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           ++L+   C++G    A +  +   +     N+V +  LI   C+ G+L +A  L  ++++
Sbjct: 452 SILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFV 511

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
               P+   YTTII+ L K G ++EA E    M   G  P  ++Y  +I  +
Sbjct: 512 KGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGF 563



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 212/449 (47%), Gaps = 27/449 (6%)

Query: 244 PNVLTYNCLIKGYCDLHRIKDA-IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
           P ++ +  L+     + +  D  I L  +M L G SP+  +   ++              
Sbjct: 95  PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILI-------------- 140

Query: 303 LMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                    N F    R++ A  ++ ++ ++G  P +VT+T ++N  C+VG+  QA ++ 
Sbjct: 141 ---------NCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELF 191

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
             M   GC+P+  +YT  +NGLC  G++  A  ++   EE    PN +TYS ++   R++
Sbjct: 192 DDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKD 251

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            +++EA D+   M  KG  P     N LIQ LC   +   A   + E  +     ++V F
Sbjct: 252 RRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTF 311

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
             L+   C++G + EA  +L  M     +PD VTY++++   S    V EA +L   M++
Sbjct: 312 NVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMIT 371

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
           KG  P V +Y  +I+ YC+V R+++  +L  +M+ +       +YN +I  LC  G L E
Sbjct: 372 KGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLRE 431

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           A  +   +    +  +  T  +L++ +  +G    A+++   M +    P+L +   + +
Sbjct: 432 ARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILID 491

Query: 661 RLILEGKSEEADTLMLRFVERGHIQPKSE 689
            +   G   +A  L      +G +QP ++
Sbjct: 492 AMCKSGNLRDARKLFSELFVKG-LQPNAQ 519


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 247/508 (48%), Gaps = 25/508 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ A ++  K    + +   MQ   ++ +L   N  I+     ++L  AL  L +M 
Sbjct: 83  FNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+++T + L+ GYC   RI DA+ L+D+M   G  PD V++ T++  L       
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGL------- 195

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                           H++    EA  LV+QM Q GC PD+VTY AVVNG C+ G++D A
Sbjct: 196 --------------FLHNKA--SEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L++M     + + V Y   ++GLC      +A  + N  E +   P+  TY+ ++  
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L   G+ S+A  ++  M+++   P  V  + LI +  +EGK+  A+K   E + +    +
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +  ++SLI GFC    L+EA  + + M      P+ VTY T+I    K  RVEE  EL  
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFG 596
           +M  +GLV   VTY T+I    Q G  +   K+ +KM+S         Y+ +++ LC +G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            LE+A  +   + ++  + D  T ++++E     G     + + C +  + + P++ +  
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHI 684
            +      +G  EEAD L     E G +
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTL 567



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 250/509 (49%), Gaps = 20/509 (3%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +  R  +D   Y +++    +      A  VL  M + G E      S L+  Y  + ++
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRI 166

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            +A+ ++  M +    P+ +  NT IH L + NK ++A+  +++M   G  P+++TY  +
Sbjct: 167 SDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAV 226

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS- 311
           + G C    I  A+ L+ +M       D V Y T++  LCK K I +   L  KM     
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGI 286

Query: 312 --NLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
             ++F          + GR  +A  L++ M +    P+VVT++A+++ F + G+L +A+K
Sbjct: 287 RPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +  +M      P+  +Y++ +NG C + +  EA+ M      +   PN +TY+ ++ G  
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +  ++ E  ++ REM ++G     V  N LIQ L + G  D A+K  ++ ++ G   +++
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            ++ L+ G C+ G LE+AL + + +   K +PD  TY  +I+ + K G+VE+  +L   +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-----LSKQKCRTAYNQVIENLCSF 595
             KG+ P V+ Y T+I  +C+ G  E+   L  +M     L    C   YN +I      
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC---YNTLIRARLRD 583

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLV 624
           G    + +++ ++       DAST  +++
Sbjct: 584 GDKAASAELIKEMRSCGFVGDASTISMVI 612



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 221/447 (49%), Gaps = 23/447 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           Y+ D + +  ++  L        A  ++  M +RG  C+P+  +Y  V     + G +  
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG--CQPDLVTYGAVVNGLCKRGDIDL 238

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +L  M+K  +  +++I NT I  L     +  A     +M+  GI P+V TYN LI 
Sbjct: 239 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLIS 298

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DS 311
             C+  R  DA +L+  M  +  +P+ V++  ++    KE ++ E   L ++M+    D 
Sbjct: 299 CLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 312 NLF-----------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
           ++F           HD  R++EAK +   M    C P+VVTY  ++ GFC+   +++  +
Sbjct: 359 DIFTYSSLINGFCMHD--RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           + ++M   G   NTV+Y   + GL   G    A+++      +   P+ ITYS+++ GL 
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM-DGAKKFMQECLNKGCAVNV 479
           + GKL +A  V   + K    P     N++I+ +C+ GK+ DG   F    L KG   NV
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL-KGVKPNV 535

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           + +T++I GFC+KG  EEA +L  +M      PD+  Y T+I A  ++G    + EL+ +
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKE 595

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVE 566
           M S G V    T   VI+     GR+E
Sbjct: 596 MRSCGFVGDASTISMVINML-HDGRLE 621



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 191/396 (48%), Gaps = 28/396 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D ++Y  +++ L K K    A  +   M  +GI  RP+ F+Y  L+      G+  +A  
Sbjct: 254 DVVIYNTIIDGLCKYKHIDDAFALFNKMETKGI--RPDVFTYNSLISCLCNYGRWSDASR 311

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +LS M +  + PN++  +  I   V   KL +A +  + M    I P++ TY+ LI G+C
Sbjct: 312 LLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              R+ +A  + + M  K C P+ V+Y T++   CK KR+                    
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV-------------------- 411

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
              EE  EL  +MSQ G + + VTY  ++ G  + G+ D A+K+ ++M   G  P+ ++Y
Sbjct: 412 ---EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +  L+GLC  GK  +A  +    ++    P+  TY++++ G+ + GK+ +  D+   +  
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P  +    +I   CR+G  + A    +E    G   +   + +LIR   + GD   
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAA 588

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           +  L+ +M  C    D  T + +I+ L  +GR+E++
Sbjct: 589 SAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623



 Score = 42.7 bits (99), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 9/165 (5%)

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--- 583
           N ++++A  L  +M+    +P++V +  ++    ++ + + ++ L E+M   Q  R    
Sbjct: 58  NLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERM---QNLRISYD 114

Query: 584 --AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
             +YN +I   C    L  A  +LGK+++   + D  T   L+  Y +      A  +  
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 174

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           +M      PD      +   L L  K+ EA  L+ + V+RG  QP
Sbjct: 175 QMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG-CQP 218


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 242/503 (48%), Gaps = 14/503 (2%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y+ ++  L    L   A  VL  M  RG    P     ++ A  R G  R+A+  L ++ 
Sbjct: 111 YFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLH 170

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
                 +   CN  +  +     + + +  L ++   G  P++++YN ++KG C   R  
Sbjct: 171 AKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWD 230

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD-- 316
           D  +L+ EM   GC P+  ++ T++ YLC+    ++V + + +M       D  ++    
Sbjct: 231 DVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATII 290

Query: 317 -----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 G  E A +++++M   G  P+VV Y  V+ G C     ++A+ +L +M+   C 
Sbjct: 291 DGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCP 350

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            + V++   ++  C NG      E++    E    P+ ITY+ V++G  +EG + EA  +
Sbjct: 351 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVML 410

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           ++ M   G  P  +   ++++ LCR  +   A++ +   + +GC  N V F +LI   C+
Sbjct: 411 LKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCK 470

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           KG +E+A+ LL  M +    PD ++Y+T+ID L K G+ EEA EL+  M++KG+ P  + 
Sbjct: 471 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTII 530

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVL 609
           Y ++     + GR + ++++ + +        A  YN VI +LC     + A      ++
Sbjct: 531 YSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMV 590

Query: 610 RTASKADASTCHVLVESYLNKGI 632
                 + ST  +L+    ++G+
Sbjct: 591 SNGCMPNESTYTILIRGLASEGL 613



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 221/435 (50%), Gaps = 29/435 (6%)

Query: 176 PEAFSYLMVAYSRA--GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P A++Y  +  S    G + +A+ VL  M     A    +C+  +     G     A+R 
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           L+ +   G T +    N ++   C+   + + ++L+ ++P  GC PD VSY  V+  LC 
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 294 EKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
            KR  +V +LM +MV                       ++GC P+V T+  ++   CR G
Sbjct: 226 AKRWDDVEELMVEMV-----------------------RVGCPPNVATFNTLIAYLCRNG 262

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
             +Q  + L QM  HGC P+   Y   ++G+C +G    A ++++        PN + Y+
Sbjct: 263 LFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYN 322

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            V+ GL    +  EA D++ EM ++      V  N+L+   C+ G +D   + +++ L  
Sbjct: 323 TVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 382

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           GC  +V+ +T++I GFC++G ++EA+ LL +M  C   P+T++YT ++  L +  R  +A
Sbjct: 383 GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDA 442

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIE 590
            EL+  M+ +G +P  VT+ T+I+  C+ G VE  ++LL++ML    C     +Y+ VI+
Sbjct: 443 QELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLV-NGCSPDLISYSTVID 501

Query: 591 NLCSFGYLEEAGKIL 605
            L   G  EEA ++L
Sbjct: 502 GLGKAGKTEEALELL 516



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 210/423 (49%), Gaps = 14/423 (3%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P+  SY  ++     A +  +   ++  M +    PN+   NT I  L       +  
Sbjct: 209 CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVH 268

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
             L +M   G TP++  Y  +I G C     + A  ++  MP  G  P+ V Y TV+  L
Sbjct: 269 EALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGL 328

Query: 292 CKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           C  +R +E  DL+ +M  +             + F   G ++   EL+ QM + GCIPDV
Sbjct: 329 CSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDV 388

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           +TYT V+NGFC+ G +D+A  +L+ M   GCKPNT+SYT  L GLC   + ++A+E+I+ 
Sbjct: 389 ITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISH 448

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             ++   PN +T++ +++ + ++G + +A +++++M+  G  P  +  + +I  L + GK
Sbjct: 449 MIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 508

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
            + A + +   +NKG   N + ++S+     ++G  ++ + + D +       D   Y  
Sbjct: 509 TEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNA 568

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +I +L K    + A +    M+S G +P   TY  +I      G V +   LL ++ S++
Sbjct: 569 VISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRR 628

Query: 580 KCR 582
             R
Sbjct: 629 AVR 631



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 215/444 (48%), Gaps = 16/444 (3%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + PN  TY  +++  C    I DA+ ++DEMPL+GC+      + ++   C+    +   
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 302 DLMEKM--------VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
             ++ +          + NL      +QG ++E  EL+ ++   GC PD+V+Y AV+ G 
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C     D  ++++ +M   GC PN  ++   +  LC NG   +  E ++   E   TP+ 
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
             Y+ ++ G+ ++G    A D++  M   G  P  V  N +++ LC   + + A+  + E
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              + C ++ V F  L+  FCQ G ++  + LL+ M      PD +TYTT+I+   K G 
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYN 586
           V+EA  L+  M + G  P  ++Y  V+   C+  R  D  +L+  M+ +Q C      +N
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMI-QQGCLPNPVTFN 462

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I  +C  G +E+A ++L ++L      D  +   +++     G    A ++   M N+
Sbjct: 463 TLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINK 522

Query: 647 NLIPDLKLCKKVSERLILEGKSEE 670
            + P+  +   ++  L  EG++++
Sbjct: 523 GITPNTIIYSSMASALSREGRTDK 546



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 153/339 (45%), Gaps = 5/339 (1%)

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           VV Y A++ G+CR G++  A+++   +      PN  +Y   +  LC  G   +A  +++
Sbjct: 76  VVAYNAMIAGYCRAGQVAAARRLAAAV---PVPPNAYTYFPIVRSLCARGLIADALTVLD 132

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                          V++    R G    A   ++ +  KG        NL++ ++C +G
Sbjct: 133 EMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQG 192

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
            +D   + +++  + GC  ++V++ ++++G C     ++   L+ +M      P+  T+ 
Sbjct: 193 CVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFN 252

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           T+I  L +NG  E+  E + +M   G  P +  Y T+I   C+ G  E    +L +M S 
Sbjct: 253 TLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSY 312

Query: 579 --QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
             +     YN V++ LCS    EEA  +L ++ +     D  T ++LV+ +   G+    
Sbjct: 313 GLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRV 372

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
            ++  +M     IPD+     V      EG  +EA  L+
Sbjct: 373 IELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLL 411



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 129/301 (42%), Gaps = 27/301 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + + ++++   +  L      +L  M   G  C P+  +Y  V   + + G +  A+ 
Sbjct: 352 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHG--CIPDVITYTTVINGFCKEGLVDEAVM 409

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M      PN +     +  L    +   A   +  M   G  PN +T+N LI   C
Sbjct: 410 LLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMC 469

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               ++ AI+L+ +M + GCSPD +SY TV+  L K                        
Sbjct: 470 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK-----------------------A 506

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G+ EEA EL+N M   G  P+ + Y+++ +   R G  D+  +M   +     + +   Y
Sbjct: 507 GKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALY 566

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
            A ++ LC   ++  A +           PN  TY++++ GL  EG + EA D++ E+  
Sbjct: 567 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCS 626

Query: 438 K 438
           +
Sbjct: 627 R 627



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 110/258 (42%), Gaps = 11/258 (4%)

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           D  R +   G     V  N +I   CR G++  A++            N   +  ++R  
Sbjct: 62  DAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAA---VPVPPNAYTYFPIVRSL 118

Query: 490 CQKGDLEEALSLLDDMYL--CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           C +G + +AL++LD+M L  C   P       I++A  + G    A   +  + +KG   
Sbjct: 119 CARGLIADALTVLDEMPLRGCAATPPMCH--VILEAACRGGGFRSAVRALQVLHAKGCTL 176

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKI 604
                  V+   C+ G V++ ++LL K L    C     +YN V++ LC     ++  ++
Sbjct: 177 DSGNCNLVVSAICEQGCVDEGVELLRK-LPSFGCEPDIVSYNAVLKGLCMAKRWDDVEEL 235

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
           + +++R     + +T + L+      G+    ++   +M      PDL++   + + +  
Sbjct: 236 MVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICK 295

Query: 665 EGKSEEADTLMLRFVERG 682
           +G  E A+ ++ R    G
Sbjct: 296 DGHHEVANDILSRMPSYG 313


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 165/618 (26%), Positives = 271/618 (43%), Gaps = 35/618 (5%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKT-------- 154
           L SL P Q  +V  S       L    +  R+  + + P  +  +   L           
Sbjct: 87  LASLTPAQAASVAESHPIAARGLDLLLFLSRERSHSYRPGTFAALARRLVDARRYAAAGR 146

Query: 155 ------KLCQGAKRVLRLMA------RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
                 K C   + + R M+      + G+     A+S L++  SR G     M     M
Sbjct: 147 ARIHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRM 206

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
               V PNLLI N  I+ L     +A A   ++++  + ++P+  TY  +I G+C  H +
Sbjct: 207 LSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDL 266

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL--------- 313
             A+++ ++M  +GC P+ V+Y T++  LC   R+ E  DL+ +M+    L         
Sbjct: 267 DSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP 326

Query: 314 ---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                D G  E+A  L   M   GC P+V TYTA+++G C  G L  A  +  +M   G 
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGV 386

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PNTV+Y A +N L  N +   A  ++N       +PN +TY+ ++ G    G   +A  
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           V+  M+++G     V  N +I+  C  G    A + +    + GC  +  ++T LI GFC
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +   +E A  L ++M      P+ VTYT +ID   K+ +++ AT L+  M   G  P V 
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKV 608
           TY  +IH   +        +L + M+ +        Y  +I+ LC  G    A ++  K+
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
           +      +  T   L+ +   +G    A  +   +    LIPD     K+ E  I+ GK 
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686

Query: 669 EEADTLMLRFVERGHIQP 686
           E A   + R ++ G  QP
Sbjct: 687 EHAFNFLGRMIKAG-CQP 703



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 219/442 (49%), Gaps = 40/442 (9%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           + A R+   M  +G  C P  ++Y  L+     +G L+ A+ +   M +  V PN +  N
Sbjct: 337 EDAWRLFVDMKNKG--CEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             I++LV   ++  A   L  M   G +PN++TYN +IKGYC L   K A+ +++ M  +
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
           G S + V+Y T++   C                       D G    A  +++ M   GC
Sbjct: 455 GHSANLVTYNTIIKGYC-----------------------DSGNTTSALRILDLMRDGGC 491

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PD  +YT ++ GFC++ +++ A  +  +M   G  PN V+YTA ++G C + K   A  
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           ++   +     PN  TY+V++HGL ++   S A ++ + M+++G FP  V    +I  LC
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + G    A +   + + +GC  N++ ++SLIR   Q+G +EEA +L  ++      PD +
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY  +I+A   +G+VE A   + +M+  G  PT+ TY  +I                E +
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN-----------EYL 720

Query: 576 LSKQKCRTAYNQVIENLCSFGY 597
           L+ Q+   A   V+ N CSFGY
Sbjct: 721 LADQRL-AALPDVVPN-CSFGY 740



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 249/553 (45%), Gaps = 44/553 (7%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  ++  L  + + + A  +   M+R G+      ++ L+       +++ A  VL++M
Sbjct: 357 TYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLM 416

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            +   +PN++  N  I    +     KA+  +  M   G + N++TYN +IKGYCD    
Sbjct: 417 GRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 476

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----------- 311
             A++++D M   GC PD+ SY  ++   CK  +++    L  +MV+D            
Sbjct: 477 TSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTAL 536

Query: 312 -NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            + +    +++ A  L+  M + GC P+V TY  +++G  +      A+++ + M   G 
Sbjct: 537 IDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PN V+YTA ++GLC NG +  A EM N   E+   PN +TYS ++  L +EGK+ EA +
Sbjct: 597 FPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAEN 656

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +  E+ + G  P  +    +I++    GK++ A  F+   +  GC   +  +  LI+G  
Sbjct: 657 LFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLK 716

Query: 491 QKGDL-EEALSLLDDMY---------------------LCKKDP--DTVTYTTIIDALSK 526
            +  L ++ L+ L D+                      L + DP         ++  LS 
Sbjct: 717 NEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLST 776

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE--DLLKLLEKMLSKQKCR-- 582
            GR  EA EL+  M+S+GL P    Y +++   C + RV   DL   + K +S Q C   
Sbjct: 777 AGRWFEANELLGSMISQGLCPDQEAYNSLL---CSLLRVRNVDLAMGVFKHMSTQGCEVH 833

Query: 583 -TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              Y ++I  LC     +EA      +L      D     VL++  L  G   L  +   
Sbjct: 834 LNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLH 893

Query: 642 RMFNRNLIPDLKL 654
            M  R  +P   +
Sbjct: 894 IMETRRYMPSFHI 906



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 182/370 (49%), Gaps = 11/370 (2%)

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           ++M   G  P+++ Y AV+N  C+ G +  A+ ++++++     P+T +YT+ + G C  
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
                A ++ N   +E   PN +TYS +++GL   G+++EA D++REM+  G  PT    
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTC 323

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
              I +LC  G  + A +   +  NKGC  NV  +T+LI G C  G L+ A+ L   M  
Sbjct: 324 TGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSR 383

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+TVTY  +I+ L +N R++ A  ++  M   G  P +VTY  +I  YC +G  + 
Sbjct: 384 DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443

Query: 568 LLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            + ++  ML +        YN +I+  C  G    A +IL  +     K D  +   L+ 
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG--KSEEADTL--MLRFVER 681
            +        A+ +   M +  L P+     +V+   +++G  K E+ DT   +L  ++R
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPN-----EVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 682 GHIQPKSEEH 691
              +P  + +
Sbjct: 559 SGCRPNVQTY 568



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 93/420 (22%), Positives = 175/420 (41%), Gaps = 41/420 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  +++   K +    A  +L  M R G  CRP   +Y  L+   ++      A  + 
Sbjct: 531 VTYTALIDGYCKDEKLDTATSLLEHMKRSG--CRPNVQTYNVLIHGLTKQNNFSGAEELC 588

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +  + PN++     I  L      + AL    +M   G  PN+LTY+ LI+     
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 648

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            ++++A  L  E+   G  PD+++Y                     KM+     +   G+
Sbjct: 649 GKVEEAENLFAELERHGLIPDEITYV--------------------KMIEA---YIMSGK 685

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +E A   + +M + GC P + TY  ++ G     E   A + L  +      P+ V   +
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGL--KNEYLLADQRLAAL------PDVVPNCS 737

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAI-TYSVVMHGLRREGKLSEACDVVREMVKK 438
           F     +     +A  +++    E     ++   + ++  L   G+  EA +++  M+ +
Sbjct: 738 F----GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 793

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P     N L+ SL R   +D A    +    +GC V++  +  LI   CQ    +EA
Sbjct: 794 GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
               ++M +   +PD V    +ID L ++G  +   E +  M ++  +P+   Y T++ R
Sbjct: 854 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIY-TILAR 912


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 257/493 (52%), Gaps = 24/493 (4%)

Query: 180 SYLMVAYSR---AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           ++L+ + SR   AG    ++Y L  +      P++++C   IH L     + KA++ +  
Sbjct: 58  THLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHI 117

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           ++  G  P+++ YN +I G+C  +RI  A +++D M  KG SPD V+Y  ++G LC    
Sbjct: 118 LENHG-HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGM 176

Query: 297 IKEVRDLMEKMVND--------------SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           +    +   +++ +              + L   QG I+EA +L+++M ++   PD+ TY
Sbjct: 177 LDSALEFKNQLLKENCKPTVVTYTILIEATLL--QGGIDEAMKLLDEMLEINLQPDMFTY 234

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
            +++ G CR G +D+A +++  +   G  P+ ++Y   L GL + GK     E+++    
Sbjct: 235 NSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVA 294

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
                N +TYSV++  + R+GK+ E   ++++M KKG  P     + LI +LC+EG++D 
Sbjct: 295 RGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDL 354

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A + +   ++ GC  ++VN+ +++   C++   +EALS+ + +      P+  +Y ++  
Sbjct: 355 AIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFS 414

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-LSKQKC 581
           AL   G    A  ++++ML KG+ P  +TY ++I   C+ G V++ ++LL  M +   +C
Sbjct: 415 ALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSEC 474

Query: 582 R---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
           +    +YN V+  LC    + +A ++L  ++    + + +T   L+E     G    A  
Sbjct: 475 KPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARD 534

Query: 639 VACRMFNRNLIPD 651
           +A  + N + I +
Sbjct: 535 LATTLVNMDAISE 547



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 180/359 (50%), Gaps = 3/359 (0%)

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           I++A ++++ +   G  PD++ Y A++ GFCR   +D A ++L +M + G  P+ V+Y  
Sbjct: 108 IDKAIQVMHILENHG-HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNI 166

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +  LC  G    A E  N   +E   P  +TY++++     +G + EA  ++ EM++  
Sbjct: 167 LIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEIN 226

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     N +I+ +CREG +D A + +    +KG A +V+ +  L+RG   +G  E   
Sbjct: 227 LQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGY 286

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            L+ DM     + + VTY+ +I ++ ++G+VEE   L+  M  KGL P    Y  +I   
Sbjct: 287 ELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAAL 346

Query: 560 CQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C+ GRV+  +++L+ M+S         YN ++  LC     +EA  I  K+       +A
Sbjct: 347 CKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNA 406

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
           S+ + +  +  + G  + A  +   M ++ + PD      +   L  +G  +EA  L++
Sbjct: 407 SSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLV 465



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 195/421 (46%), Gaps = 29/421 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  ++    +      A +VL  M  +G       ++ L+ +    G L +A+   
Sbjct: 125 DLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFK 184

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + + K    P ++     I   ++   + +A++ L+ M    + P++ TYN +I+G C  
Sbjct: 185 NQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCRE 244

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             +  A ++I  +  KG +PD ++Y  ++            R L+           +QG+
Sbjct: 245 GYVDRAFQIISSISSKGYAPDVITYNILL------------RGLL-----------NQGK 281

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            E   EL++ M   GC  +VVTY+ +++  CR G++++   +L+ M   G KP+   Y  
Sbjct: 282 WEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDP 341

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +  LC  G+   A E+++    +   P+ + Y+ ++  L ++ +  EA  +  ++ + G
Sbjct: 342 LIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVG 401

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     N +  +L   G    A   + E L+KG   + + + SLI   C+ G ++EA+
Sbjct: 402 CSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAI 461

Query: 500 SLLDDMYL----CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            LL DM +    CK  P  V+Y  ++  L K  RV +A E++  M+ KG  P   TY  +
Sbjct: 462 ELLVDMEMESSECK--PSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFL 519

Query: 556 I 556
           I
Sbjct: 520 I 520



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 175/373 (46%), Gaps = 27/373 (7%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C+P   +Y  L+ A    G +  AM +L  M +  + P++   N+ I  +     + +A 
Sbjct: 192 CKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAF 251

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
           + +  +   G  P+V+TYN L++G  +  + +   +L+ +M  +GC  + V+Y  ++  +
Sbjct: 252 QIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSV 311

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           C++                       G++EE   L+  M + G  PD   Y  ++   C+
Sbjct: 312 CRD-----------------------GKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCK 348

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            G +D A ++L  M   GC P+ V+Y   L  LC   ++ EA  +     E   +PNA +
Sbjct: 349 EGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASS 408

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM--QE 469
           Y+ +   L   G    A  ++ EM+ KG  P  +  N LI  LCR+G +D A + +   E
Sbjct: 409 YNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDME 468

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
             +  C  +VV++  ++ G C+   + +A+ +L  M      P+  TYT +I+ +   G 
Sbjct: 469 MESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGC 528

Query: 530 VEEATELMMKMLS 542
           + +A +L   +++
Sbjct: 529 LNDARDLATTLVN 541



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 164/335 (48%), Gaps = 3/335 (0%)

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G  +++   L+ + + G KP+ V  T  ++GL    K+++    +    E    P+ 
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGL-FTSKTIDKAIQVMHILENHGHPDL 126

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           I Y+ ++ G  R  ++  A  V+  M  KGF P  V  N+LI SLC  G +D A +F  +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            L + C   VV +T LI     +G ++EA+ LLD+M      PD  TY +II  + + G 
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
           V+ A +++  + SKG  P V+TY  ++      G+ E   +L+  M+++  +     Y+ 
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I ++C  G +EE   +L  + +   K D      L+ +   +G   LA +V   M +  
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +PD+     +   L  + +++EA ++  +  E G
Sbjct: 367 CVPDIVNYNTILACLCKQKRADEALSIFEKLGEVG 401



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 161/346 (46%), Gaps = 27/346 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A +++  ++ +G       ++ L+      GK      ++S M       N++  +  I 
Sbjct: 250 AFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLIS 309

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            +    K+ + +  L+ M+  G+ P+   Y+ LI   C   R+  AI+++D M   GC P
Sbjct: 310 SVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVP 369

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D V+Y T++  LCK+KR  E   + EK                       + ++GC P+ 
Sbjct: 370 DIVNYNTILACLCKQKRADEALSIFEK-----------------------LGEVGCSPNA 406

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            +Y ++ +     G   +A  M+ +M   G  P+ ++Y + ++ LC +G   EA E++  
Sbjct: 407 SSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVD 466

Query: 400 SEEEW--WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
            E E     P+ ++Y++V+ GL +  ++S+A +V+  MV KG  P       LI+ +   
Sbjct: 467 MEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFG 526

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
           G ++ A+      +N   A++  +F  L + FC K D+   L+L D
Sbjct: 527 GCLNDARDLATTLVNMD-AISEHSFERLYKTFC-KLDVYRQLNLSD 570



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 136/303 (44%), Gaps = 25/303 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y  D I Y ++L  L      +    ++  M  RG E     +S L+ +  R GK+   +
Sbjct: 262 YAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGV 321

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M+K  + P+    +  I  L    ++  A+  L+ M   G  P+++ YN ++   
Sbjct: 322 GLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACL 381

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   R  +A+ + +++   GCSP+  SY ++   L                         
Sbjct: 382 CKQKRADEALSIFEKLGEVGCSPNASSYNSMFSAL-----------------------WS 418

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML--QQMYHHGCKPNT 374
            G    A  ++ +M   G  PD +TY ++++  CR G +D+A ++L   +M    CKP+ 
Sbjct: 419 TGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSV 478

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           VSY   L GLC   +  +A E++    ++   PN  TY+ ++ G+   G L++A D+   
Sbjct: 479 VSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATT 538

Query: 435 MVK 437
           +V 
Sbjct: 539 LVN 541



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 3/196 (1%)

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ G+  E+L  L  +      PD V  T +I  L  +  +++A ++M  + + G  P +
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH-PDL 126

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGK 607
           + Y  +I  +C+  R++   ++L++M +K        YN +I +LCS G L+ A +   +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +L+   K    T  +L+E+ L +G    A K+   M   NL PD+     +   +  EG 
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 668 SEEADTLMLRFVERGH 683
            + A  ++     +G+
Sbjct: 247 VDRAFQIISSISSKGY 262


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 248/487 (50%), Gaps = 20/487 (4%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G+L      L  M     +P+++ C   I       +   A + +  ++ +G   +V 
Sbjct: 91  RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           +YN LI GYC    I++A++++D M   G SP+  +Y  V+  LC   ++K+   ++ + 
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207

Query: 308 VNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
           +  S  + D             +  + +A +L N+M   GC PDVVTY  ++ GFC+ G 
Sbjct: 208 LQ-SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGR 266

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           LD+A + L+++  +GC+P+ +S+   L  LC  G+ ++A +++ T   +   P+ +T+++
Sbjct: 267 LDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNI 326

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           +++ L ++G L +A +V+  M K G  P     N LIQ  C    +D A ++++  +++G
Sbjct: 327 LINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRG 386

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           C  ++V +  L+   C+ G +++A+ +L  +      P  ++Y T+ID L K G+ E A 
Sbjct: 387 CYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAV 446

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE--KMLSKQKCRTAYNQVIENL 592
           EL+ +M  KGL P ++T  +V+    + G+V + +K     K  + +     YN +I  L
Sbjct: 447 ELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGL 506

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C       A   L  ++    K   +T   L++    +G+   A K++  +++R L+   
Sbjct: 507 CKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKR- 565

Query: 653 KLCKKVS 659
            L +KVS
Sbjct: 566 SLVEKVS 572



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 209/416 (50%), Gaps = 25/416 (6%)

Query: 164 LRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           LR++ R G+      +  ++ +    GKL+ AM VL    ++   P+++ C   I     
Sbjct: 169 LRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCK 228

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
            + + +A++    M+  G  P+V+TYN LIKG+C   R+ +AI+ + ++P  GC PD +S
Sbjct: 229 ESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVIS 288

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           +  ++  LC                         GR  +A +L+  M + GC+P VVT+ 
Sbjct: 289 HNMILRSLC-----------------------SGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE-AREMINTSEE 402
            ++N  C+ G L +A  +L+ M  HG  PN+ S+   + G C NGK ++ A E +     
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFC-NGKGIDRAIEYLEIMVS 384

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               P+ +TY++++  L ++GK+ +A  ++ ++  KG  P+ +  N +I  L + GK + 
Sbjct: 385 RGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAEL 444

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A + ++E   KG   +++  TS++ G  ++G + EA+     +      P+   Y +II 
Sbjct: 445 AVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIIT 504

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            L K+ +   A + +  M++KG  PT  TY T+I      G  ED  KL  ++ S+
Sbjct: 505 GLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSR 560



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 173/339 (51%), Gaps = 27/339 (7%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNA 195
           + D + Y ++++   K      A R L+ +   G  C+P+  S+ M+  S    G+  +A
Sbjct: 248 KPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG--CQPDVISHNMILRSLCSGGRWMDA 305

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           M +L+ M +    P+++  N  I+ L     L KAL  LE M   G TPN  ++N LI+G
Sbjct: 306 MKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQG 365

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           +C+   I  AI+ ++ M  +GC PD V+Y  ++  LCK+                     
Sbjct: 366 FCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKD--------------------- 404

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G++++A  +++Q+S  GC P +++Y  V++G  +VG+ + A ++L++M + G KP+ +
Sbjct: 405 --GKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLI 462

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           + T+ + GL   GK  EA +  +  +     PNA  Y+ ++ GL +  + S A D + +M
Sbjct: 463 TCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADM 522

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           V KG  PT      LI+ +  EG  + A K   E  ++G
Sbjct: 523 VAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRG 561



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 117/248 (47%), Gaps = 34/248 (13%)

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L R G+L E    +  M  KG  P  +    LI+  C+ G+   A + M      G  ++
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDM--------------YLCKKD------------- 511
           V ++  LI G+C+ G++EEAL +LD M               LC +              
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQL 208

Query: 512 -----PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                PD VT T +IDA  K   V +A +L  +M +KG  P VVTY  +I  +C+ GR++
Sbjct: 209 QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLD 268

Query: 567 DLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           + ++ L+K+ S   Q    ++N ++ +LCS G   +A K+L  +LR        T ++L+
Sbjct: 269 EAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILI 328

Query: 625 ESYLNKGI 632
                KG+
Sbjct: 329 NFLCQKGL 336



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 2/206 (0%)

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           +R   + G+LEE    L+ M    K PD +  T +I    K GR + A+++M  +   G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
           V  V +Y  +I  YC+ G +E+ L++L++M       T Y+ V+ +LC  G L++A ++L
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRMGVSPNAAT-YDAVLCSLCDRGKLKQAMQVL 204

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
           G+ L++    D  TC VL+++   +     A K+   M N+   PD+     + +     
Sbjct: 205 GRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKG 264

Query: 666 GKSEEADTLMLRFVERGHIQPKSEEH 691
           G+ +EA   + +    G  QP    H
Sbjct: 265 GRLDEAIRFLKKLPSYG-CQPDVISH 289


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 225/425 (52%), Gaps = 13/425 (3%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M + G       ++ L+      G++ +A  +   M KA  +P+++  NT +H      +
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L +AL+  +     G  P+V+TYN LI G+C   ++ +A +++  M  +   PD V+Y +
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 287 VMGYLCKEKRIKEVRDLM------EKMVNDSNLFHDQGR----IEEAKELVNQMSQMGCI 336
           ++  LCK  R+ E R L+        ++  S L     R    + EA +L   + + G  
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYE 180

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P+V TY  +++G  +   +++A ++   +  HG +P+ ++YT F++GLC  G+  +A  M
Sbjct: 181 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 240

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +   +E+   P+ ++++ V++GL +E ++ EA  ++  M  KG  P  +  N LI   CR
Sbjct: 241 LKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCR 300

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC---QKGDLEEALSLLDDMYLCKKDPD 513
            GK   A    +E L +G    VV +  L+ G C   Q+G ++EA++L D M    + PD
Sbjct: 301 AGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPD 360

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VTY+ +ID L K G++++A  L+  M +KG +P V TY ++I   C + +V++ L+L  
Sbjct: 361 VVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFV 420

Query: 574 KMLSK 578
            M+ K
Sbjct: 421 AMVEK 425



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 226/444 (50%), Gaps = 27/444 (6%)

Query: 129 YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR 188
           +W +R        I Y  +L  L        A+ +   M + G       ++ L+  + +
Sbjct: 6   FWPNR--------ITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 57

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
            G+L  A+ +     K    P+++  N  I+     +KL +A R L+RM    + P+V+T
Sbjct: 58  VGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVT 117

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR-IKEVRDLM--- 304
           YN L+ G C   R+ +A  LI +   KG SP+ ++Y T++  LC+E R + E   L    
Sbjct: 118 YNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSV 174

Query: 305 -----EKMVNDSNLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                E  V   N+  D    + R+ EA EL + + + G  PD +TYT  ++G C+ G +
Sbjct: 175 LKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 234

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           + A  ML+ M   GC P+ VS+ A +NGLC   +  EA  +++  E +  +PNAI+++ +
Sbjct: 235 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 294

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR---EGKMDGAKKFMQECLN 472
           + G  R GK  +A    +EM+K+G  PT V  N+L+  LC+   EG++  A       + 
Sbjct: 295 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           KG   +VV +++LI G  + G L++A  LL  M      P+  TY ++I  L    +V+E
Sbjct: 355 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDE 414

Query: 533 ATELMMKMLSKGLVPTVVTYRTVI 556
           A EL + M+ KG VP  +TY T+I
Sbjct: 415 ALELFVAMVEKGCVPDTITYGTII 438



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 233/444 (52%), Gaps = 23/444 (5%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+K    PN +  N  +  L  G +++ A    ERM  AG +P+V+TYN L+ G+C +  
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD----- 316
           + +A+K+ D    +G  PD V+Y  ++   CK  ++ E + ++++MV++ NL  D     
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE-NLVPDVVTYN 119

Query: 317 --------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR-VGELDQAKKMLQQMYH 367
                    GR++EA+ L+      G  P+V+TY+ +++G CR +  + +A K+   +  
Sbjct: 120 SLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLK 176

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G +P   +Y   ++GL    +  EA E+ +   +    P+AITY+V + GL + G++ +
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 236

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++++M +KG  P  V  N +I  LC+E ++D A+  +     KGC+ N ++F +LI 
Sbjct: 237 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 296

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK---NGRVEEATELMMKMLSKG 544
           G C+ G  ++A++   +M      P  VTY  ++D L K    GR++EA  L   M+ KG
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 356

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAG 602
            VP VVTY  +I    + G+++D  +LL  M +K        YN +I  LC    ++EA 
Sbjct: 357 RVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEAL 416

Query: 603 KILGKVLRTASKADASTCHVLVES 626
           ++   ++      D  T   ++ +
Sbjct: 417 ELFVAMVEKGCVPDTITYGTIISA 440



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 202/405 (49%), Gaps = 23/405 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y  D + Y  +L    K      A ++     +RG       ++ L+  + +A KL  A 
Sbjct: 41  YSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQ 100

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA--GITPNVLTYNCLIK 254
            +L  M    + P+++  N+ ++ L    ++ +A     RM +   G +PNV+TY+ LI 
Sbjct: 101 RILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEA-----RMLIVDKGFSPNVITYSTLIS 155

Query: 255 GYC-DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-- 311
           G C +L  + +A+KL   +  +G  P+  +Y  ++  L KE R+ E  +L   +V     
Sbjct: 156 GLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLE 215

Query: 312 ------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                  +F D     GR+E+A  ++  M + GC+PDVV++ AV+NG C+   +D+A+ +
Sbjct: 216 PDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVL 275

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL-- 419
           L  M   GC PN +S+   + G C  GK  +A        +    P  +TY++++ GL  
Sbjct: 276 LSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCK 335

Query: 420 -RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
            R+EG++ EA  +   M++KG  P  V  + LI  L + GK+D A++ +     KGC  N
Sbjct: 336 ARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPN 395

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           V  + SLI G C    ++EAL L   M      PDT+TY TII A
Sbjct: 396 VYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 184/367 (50%), Gaps = 21/367 (5%)

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M + G  P+ +TY A+++G C  G +  A+ + ++M   G  P+ V+Y   L+G C  G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             EA ++ + + +  + P+ +TY+ +++G  +  KL EA  +++ MV +   P  V  N 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK-GDLEEALSLLDDMYLC 508
           L+  LC+ G++D A+  +   ++KG + NV+ +++LI G C++   + EAL L   +   
Sbjct: 121 LVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
             +P+  TY  +ID L K  RV EA EL   ++  GL P  +TY   I   C+ GRVED 
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 569 LKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           L +L+ M  ++ C     ++N VI  LC    ++EA  +L  +       +A + + L+ 
Sbjct: 238 LLMLKDM-DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 296

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDL--------KLCKKVSERLILEGKSEEADTLMLR 677
                G    A      M  R + P +         LCK   E     G+ +EA TL   
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQE-----GRIKEAITLFDA 351

Query: 678 FVERGHI 684
            +E+G +
Sbjct: 352 MIEKGRV 358


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 165/618 (26%), Positives = 271/618 (43%), Gaps = 35/618 (5%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKT-------- 154
           L SL P Q  +V  S       L    +  R+  + + P  +  +   L           
Sbjct: 87  LASLTPAQAASVAESHPIAARGLDLLLFLSRERSHSYRPGTFAALARRLVDARRYAAAGR 146

Query: 155 ------KLCQGAKRVLRLMA------RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
                 K C   + + R M+      + G+     A+S L++  SR G     M     M
Sbjct: 147 ARIHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRM 206

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
               V PNLLI N  I+ L     +A A   ++++  + ++P+  TY  +I G+C  H +
Sbjct: 207 LSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDL 266

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL--------- 313
             A+++ ++M  +GC P+ V+Y T++  LC   R+ E  DL+ +M+    L         
Sbjct: 267 DSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP 326

Query: 314 ---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                D G  E+A  L   M   GC P+V TYTA+++G C  G L  A  +  +M   G 
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 386

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PNTV+Y A +N L  N +   A  ++N       +PN +TY+ ++ G    G   +A  
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           V+  M+++G     V  N +I+  C  G    A + +    + GC  +  ++T LI GFC
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +   +E A  L ++M      P+ VTYT +ID   K+ +++ AT L+  M   G  P V 
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKV 608
           TY  +IH   +        +L + M+ +        Y  +I+ LC  G    A ++  K+
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
           +      +  T   L+ +   +G    A  +   +    LIPD     K+ E  I+ GK 
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686

Query: 669 EEADTLMLRFVERGHIQP 686
           E A   + R ++ G  QP
Sbjct: 687 EHAFNFLGRMIKAG-CQP 703



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 219/442 (49%), Gaps = 40/442 (9%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           + A R+   M  +G  C P  ++Y  L+     +G L+ A+ +   M +  V PN +  N
Sbjct: 337 EDAWRLFVDMKNKG--CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             I++LV   ++  A   L  M   G +PN++TYN +IKGYC L   K A+ +++ M  +
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
           G S + V+Y T++   C                       D G    A  +++ M   GC
Sbjct: 455 GHSANLVTYNTIIKGYC-----------------------DSGNTTSALRILDLMRDGGC 491

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PD  +YT ++ GFC++ +++ A  +  +M   G  PN V+YTA ++G C + K   A  
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           ++   +     PN  TY+V++HGL ++   S A ++ + M+++G FP  V    +I  LC
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + G    A +   + + +GC  N++ ++SLIR   Q+G +EEA +L  ++      PD +
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY  +I+A   +G+VE A   + +M+  G  PT+ TY  +I                E +
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN-----------EYL 720

Query: 576 LSKQKCRTAYNQVIENLCSFGY 597
           L+ Q+   A   V+ N CSFGY
Sbjct: 721 LADQRL-AALPDVVPN-CSFGY 740



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/553 (26%), Positives = 249/553 (45%), Gaps = 44/553 (7%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  ++  L  + L + A  +   M+R G+      ++ L+       +++ A  VL++M
Sbjct: 357 TYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLM 416

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            +   +PN++  N  I    +     KA+  +  M   G + N++TYN +IKGYCD    
Sbjct: 417 GRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 476

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----------- 311
             A++++D M   GC PD+ SY  ++   CK  +++    L  +MV+D            
Sbjct: 477 TSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTAL 536

Query: 312 -NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            + +    +++ A  L+  M + GC P+V TY  +++G  +      A+++ + M   G 
Sbjct: 537 IDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PN V+YTA ++GLC NG +  A EM N   E+   PN +TYS ++  L +EGK+ EA +
Sbjct: 597 FPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAEN 656

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +  E+ + G  P  +    +I++    GK++ A  F+   +  GC   +  +  LI+G  
Sbjct: 657 LFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLK 716

Query: 491 QKGDL-EEALSLLDDMY---------------------LCKKDP--DTVTYTTIIDALSK 526
            +  L ++ L+ L D+                      L + DP         ++  LS 
Sbjct: 717 NEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLST 776

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE--DLLKLLEKMLSKQKCR-- 582
            GR  EA EL+  M+S+GL P    Y +++   C + RV   DL   + K +S Q C   
Sbjct: 777 AGRWFEANELLGSMISQGLCPDQEAYNSLL---CSLLRVRNVDLAMGVFKHMSTQGCEVH 833

Query: 583 -TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              Y ++I  LC     +EA      +L      D     VL++  L  G   L  +   
Sbjct: 834 LNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLH 893

Query: 642 RMFNRNLIPDLKL 654
            M  R  +P   +
Sbjct: 894 IMETRRYMPSFHI 906



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 182/370 (49%), Gaps = 11/370 (2%)

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           ++M   G  P+++ Y AV+N  C+ G +  A+ ++++++     P+T +YT+ + G C  
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
                A ++ N   +E   PN +TYS +++GL   G+++EA D++REM+  G  PT    
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTC 323

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
              I +LC  G  + A +   +  NKGC  NV  +T+LI G C  G L+ A+ L   M  
Sbjct: 324 TGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR 383

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+TVTY  +I+ L +N R++ A  ++  M   G  P +VTY  +I  YC +G  + 
Sbjct: 384 DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443

Query: 568 LLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            + ++  ML +        YN +I+  C  G    A +IL  +     K D  +   L+ 
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG--KSEEADTL--MLRFVER 681
            +        A+ +   M +  L P+     +V+   +++G  K E+ DT   +L  ++R
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPN-----EVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 682 GHIQPKSEEH 691
              +P  + +
Sbjct: 559 SGCRPNVQTY 568



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 93/420 (22%), Positives = 175/420 (41%), Gaps = 41/420 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  +++   K +    A  +L  M R G  CRP   +Y  L+   ++      A  + 
Sbjct: 531 VTYTALIDGYCKDEKLDTATSLLEHMKRSG--CRPNVQTYNVLIHGLTKQNNFSGAEELC 588

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +  + PN++     I  L      + AL    +M   G  PN+LTY+ LI+     
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 648

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            ++++A  L  E+   G  PD+++Y                     KM+     +   G+
Sbjct: 649 GKVEEAENLFAELERHGLIPDEITYV--------------------KMIEA---YIMSGK 685

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +E A   + +M + GC P + TY  ++ G     E   A + L  +      P+ V   +
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGL--KNEYLLADQRLAAL------PDVVPNCS 737

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAI-TYSVVMHGLRREGKLSEACDVVREMVKK 438
           F     +     +A  +++    E     ++   + ++  L   G+  EA +++  M+ +
Sbjct: 738 F----GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 793

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P     N L+ SL R   +D A    +    +GC V++  +  LI   CQ    +EA
Sbjct: 794 GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
               ++M +   +PD V    +ID L ++G  +   E +  M ++  +P+   Y T++ R
Sbjct: 854 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIY-TILAR 912


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 240/507 (47%), Gaps = 55/507 (10%)

Query: 168 ARR---GIECRPEAFSYLMVAYSRAGKLR--NAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           ARR    +   P A++Y  V     G+ R  +A+ VL  M   +  P   + +  I    
Sbjct: 103 ARRLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESAC 162

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
                + ALR LE +   G T +    N +I   CD   + + ++++ ++PL GC  D V
Sbjct: 163 RSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIV 222

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           SY  V+  LC  KR  +V +LM++MV             +  E ++QM+Q GC PD+  Y
Sbjct: 223 SYNAVLKGLCAAKRWGDVEELMDEMV-------------KVHEALSQMAQHGCTPDIRMY 269

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC----------------- 385
             +++G C+ G  + A ++L +M  +G KPN V Y   L G+C                 
Sbjct: 270 ATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQ 329

Query: 386 ------------------HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
                              NG      E++    E    P+ ITY+ V++G  +EG + E
Sbjct: 330 KNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDE 389

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +++ M   G  P  +   ++++ LC   +   A++ M   + +GC  N V F ++I 
Sbjct: 390 AVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIIN 449

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
             C+KG +E+A+ LL  M +   +PD ++Y+T+ID L K G+ EEA EL+  M++KG+ P
Sbjct: 450 FLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITP 509

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKIL 605
            V+TY ++     + GR++ ++++ + +        A  YN VI +LC     + A   L
Sbjct: 510 NVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFL 569

Query: 606 GKVLRTASKADASTCHVLVESYLNKGI 632
             ++      + ST   L++   ++G+
Sbjct: 570 AYMVSNGCMPNESTYTALIKGLASEGL 596



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 235/473 (49%), Gaps = 24/473 (5%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  M  R     P  +  ++ +  R+G   +A+ VL  +       +   CN  I+
Sbjct: 135 ALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVIN 194

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE-------- 271
            +     + + L  L ++ L G   ++++YN ++KG C   R  D  +L+DE        
Sbjct: 195 AICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEAL 254

Query: 272 --MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNL---------FHDQ 317
             M   GC+PD   Y T++  +CKE   +   +++ +M +     N+             
Sbjct: 255 SQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSA 314

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            R E+A+EL+ +M Q  C  D VT+  +V+ FC+ G +D+  ++L+QM  HGC P+ ++Y
Sbjct: 315 DRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITY 374

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T  +NG C  G   EA  ++         PN I+Y++V+ GL    +  +A +++  M++
Sbjct: 375 TTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQ 434

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P PV  N +I  LC++G ++ A + +++ L  GC  ++++++++I G  + G  EE
Sbjct: 435 QGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEE 494

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           AL LL+ M      P+ +TY+++  AL++ GR+++  ++   +    +    V Y  VI 
Sbjct: 495 ALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVIS 554

Query: 558 RYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
             C+    +  +  L  M+S       + Y  +I+ L S G L EA  +L ++
Sbjct: 555 SLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 223/475 (46%), Gaps = 32/475 (6%)

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I  L V  + A A+R L+    AG    V+ YN ++ GYC + +++ A +L   +P+   
Sbjct: 59  IRSLCVAGRTADAVRALDA---AGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVPVP-- 113

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-----NLFH-------DQGRIEEAKE 325
            P+  +Y+ V+  LC   RI +   ++++M + S      ++H         G    A  
Sbjct: 114 -PNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALR 172

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++  +   G   D      V+N  C  G +D+  +ML+++   GC+ + VSY A L GLC
Sbjct: 173 VLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLC 232

Query: 386 HNGK----------SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
              +           ++  E ++   +   TP+   Y+ ++ G+ +EG    A +++  M
Sbjct: 233 AAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRM 292

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              G  P  V  N +++ +C   + + A++ + E   K C ++ V F  L+  FCQ G +
Sbjct: 293 PSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLV 352

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           +  + LL+ M      PD +TYTT+I+   K G ++EA  L+  M S G  P  ++Y  V
Sbjct: 353 DRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIV 412

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +   C   R  D  +L+ +M+ +Q C      +N +I  LC  G +E+A ++L ++L   
Sbjct: 413 LKGLCSTERWVDAEELMSRMI-QQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNG 471

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
              D  +   +++     G    A ++   M N+ + P++     ++  L  EG+
Sbjct: 472 CNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGR 526



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 174/357 (48%), Gaps = 12/357 (3%)

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           LS M +    P++ +  T I  +        A   L RM   G+ PNV+ YN ++KG C 
Sbjct: 254 LSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICS 313

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
             R + A +L+ EM  K C  D V++  ++ + C+   +  V +L+E+M+          
Sbjct: 314 ADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVIT 373

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                N F  +G I+EA  L+  M   GC P+ ++YT V+ G C       A++++ +M 
Sbjct: 374 YTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMI 433

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             GC PN V++   +N LC  G   +A E++         P+ I+YS V+ GL + GK  
Sbjct: 434 QQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTE 493

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA +++  M+ KG  P  +  + +  +L REG++D   +      +     + V + ++I
Sbjct: 494 EALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVI 553

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
              C++ + + A+  L  M      P+  TYT +I  L+  G + EA +L+ ++ S+
Sbjct: 554 SSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSR 610



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 202/484 (41%), Gaps = 79/484 (16%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI+  C   R  DA++ +D     G +   V Y  ++   C+                  
Sbjct: 58  LIRSLCVAGRTADAVRALDA---AGNAAGVVDYNAMVAGYCR------------------ 96

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 G++E A+ L    + +   P+  TY  VV G C  G +  A  +L +M    C 
Sbjct: 97  -----VGQVEAARRLA---AAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCV 148

Query: 372 P-----------------------------------NTVSYTAFLNGLCHNGKSLEAREM 396
           P                                   +T +    +N +C  G   E  EM
Sbjct: 149 PIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEM 208

Query: 397 INTSEEEWWTPNAITYSVVMHGL---RREGKLSEACD-------VVREMVKKGFFPTPVE 446
           +          + ++Y+ V+ GL   +R G + E  D        + +M + G  P    
Sbjct: 209 LRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRM 268

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
              +I  +C+EG  + A + +    + G   NVV + ++++G C     E+A  LL +MY
Sbjct: 269 YATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMY 328

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                 D VT+  ++D   +NG V+   EL+ +ML  G +P V+TY TVI+ +C+ G ++
Sbjct: 329 QKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLID 388

Query: 567 DLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           + + LL+ M S   C+    +Y  V++ LCS     +A +++ ++++     +  T + +
Sbjct: 389 EAVMLLKNMPS-CGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTI 447

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +     KG+   A ++  +M      PDL     V + L   GK+EEA  L+   + +G 
Sbjct: 448 INFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKG- 506

Query: 684 IQPK 687
           I P 
Sbjct: 507 ITPN 510



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 144/332 (43%), Gaps = 32/332 (9%)

Query: 109 RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA 168
           + IC+  R +  E +  + +     Q     D + + ++++   +  L      +L  M 
Sbjct: 309 KGICSADRWEKAEELLTEMY-----QKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 363

Query: 169 RRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
             G  C P+  +Y  V   + + G +  A+ +L  M      PN +     +  L    +
Sbjct: 364 EHG--CMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTER 421

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
              A   + RM   G  PN +T+N +I   C    ++ AI+L+ +M + GC+PD +SY T
Sbjct: 422 WVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYST 481

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           V+  L K                        G+ EEA EL+N M   G  P+V+TY+++ 
Sbjct: 482 VIDGLGK-----------------------AGKTEEALELLNVMINKGITPNVITYSSMA 518

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
               R G +D+  +M   +     + + V Y A ++ LC   ++  A + +         
Sbjct: 519 FALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCM 578

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           PN  TY+ ++ GL  EG L EA D++ E+  +
Sbjct: 579 PNESTYTALIKGLASEGLLCEAQDLLSELCSR 610



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 154/345 (44%), Gaps = 18/345 (5%)

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           +A++   C  G    A + L      G     V Y A + G C  G+   AR +   +  
Sbjct: 56  SALIRSLCVAGRTADAVRALDA---AGNAAGVVDYNAMVAGYCRVGQVEAARRL---AAA 109

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               PNA TY  V+ GL   G++++A  V+ EM  +   P P   +++I+S CR G    
Sbjct: 110 VPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSS 169

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A + ++    KG  ++  N   +I   C +G ++E L +L  + L   + D V+Y  ++ 
Sbjct: 170 ALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLK 229

Query: 523 AL---SKNGRVEEATELMMK-------MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
            L    + G VEE  + M+K       M   G  P +  Y T+I   C+ G  E   ++L
Sbjct: 230 GLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEIL 289

Query: 573 EKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
            +M S   +     YN V++ +CS    E+A ++L ++ +     D  T ++LV+ +   
Sbjct: 290 SRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQN 349

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           G+     ++  +M     +PD+     V      EG  +EA  L+
Sbjct: 350 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 394


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 207/454 (45%), Gaps = 23/454 (5%)

Query: 125 LQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV 184
           + FF WA  Q  Y H  + Y  +LE+L+K+  C         M   G       + YL+ 
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLR 60

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
           +  +A +   A  V   M     +PN+   +  I  L  G K+ +A   L  M   G  P
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           NV+TY  L+ G C + ++K+A+ L   M  +GC PD V Y  ++                
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLI---------------- 164

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  + F  +G + EA  L  +M + GCIP V TY ++++GF R GE  + + + + 
Sbjct: 165 -------DGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKD 217

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   GC PN  ++   L+G C  G  +EA  +          P+ ++Y+ ++ G+  +GK
Sbjct: 218 MLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGK 277

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             EA  ++REM++ G  P  V  N+LI    + G +D A K   E    G   +  ++++
Sbjct: 278 PHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYST 337

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +I   C+ G +  A  +  DM      PD      ++  L +  R+ E+ EL   M+   
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE 397

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            VP +  Y  ++++ C+  R +D+ ++  ++  +
Sbjct: 398 CVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTER 431



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 188/382 (49%), Gaps = 25/382 (6%)

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
             L+YN L++      R        ++M   GC P+  +Y  ++  LC+ +R        
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRF------- 68

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                           EEA+ +   M+  GC P+V +Y+ ++ G CR  ++D+A ++L +
Sbjct: 69  ----------------EEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNE 112

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G +PN V+Y + L+GLC  GK  EA ++ +        P+ + Y+V++ G  ++G 
Sbjct: 113 MIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGD 172

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + EA  +  EM++KG  PT    N L+    R+G+    +   ++ L +GC  N+  F +
Sbjct: 173 MGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN 232

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L+ GFC+ GD+ EA  L  +M      PD V+Y T+I  +   G+  EA  L+ +M+  G
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSG 292

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAG 602
           + P +V+Y  +I  Y + G ++  +KL  ++     +    +Y+ +I+ LC  G +  A 
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352

Query: 603 KILGKVLRTASKADASTCHVLV 624
            +   ++   S  DA+    LV
Sbjct: 353 VVFKDMIANGSAPDAAVVIPLV 374



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 158/346 (45%), Gaps = 2/346 (0%)

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            ++Y  ++    + G  D        M   GC PNT +Y   L  LC   +  EAR +  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
               +  +PN  +YS+++ GL R  K+ EA +++ EM+  G  P  V    L+  LC+ G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           K+  A       + +GC  + V +  LI GF +KGD+ EA  L ++M      P   TY 
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--L 576
           +++   S+ G       L   ML +G VP + T+  ++  +C++G + +  +L  +M  L
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 577 SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
                  +YN +I  +CS G   EA ++L +++R+    D  + ++L++ Y   G    A
Sbjct: 257 GCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            K+   +    L PD      + + L   GK   A  +    +  G
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 158/343 (46%), Gaps = 20/343 (5%)

Query: 139 HDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           H P  + Y  +L  L K    + A  +   M  RG  C P+   Y  L+  +S+ G +  
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG--CPPDGVVYNVLIDGFSKKGDMGE 175

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +   M +    P +   N+ +       +  +     + M   G  PN+ T+N L+ 
Sbjct: 176 AYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLD 235

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
           G+C +  + +A +L  EM   GC PD VSY T++  +C + +  E + L+ +M+      
Sbjct: 236 GFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGP 295

Query: 312 -----NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                N+  D     G ++ A +L  ++ + G  PD  +Y+ +++  CR G++  A  + 
Sbjct: 296 DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF 355

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           + M  +G  P+       + GLC   +  E+ E+     +    P    Y+++M+ L + 
Sbjct: 356 KDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKA 415

Query: 423 GKLSEACDVVREMVKKGFFPTPVEIN-LLIQSLCREGKMDGAK 464
            +  + C++  E+ ++GF P  VEI+ +++++L R    D A+
Sbjct: 416 KRSDDVCEIFHELTERGFSPD-VEISKVILETLRRSDDKDAAE 457



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 4/174 (2%)

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
           T++Y  +++ L+K+GR +        ML+ G VP   TY  ++   CQ  R E+   +  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 574 KMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
            M + Q C     +Y+ +I  LC    ++EA ++L +++    + +  T   L+      
Sbjct: 77  GM-AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           G    A  +  RM  R   PD  +   + +    +G   EA  L    +E+G I
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 165/618 (26%), Positives = 271/618 (43%), Gaps = 35/618 (5%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKT-------- 154
           L SL P Q  +V  S       L    +  R+  + + P  +  +   L           
Sbjct: 87  LASLTPAQAASVAESHPIAARGLDLLLFLSRERSHSYRPGTFAALARRLVDARRYAAAGR 146

Query: 155 ------KLCQGAKRVLRLMA------RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
                 K C   + + R M+      + G+     A+S L++  SR G     M     M
Sbjct: 147 ARIHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRM 206

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
               V PNLLI N  I+ L     +A A   ++++  + ++P+  TY  +I G+C  H +
Sbjct: 207 LSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDL 266

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL--------- 313
             A+++ ++M  +GC P+ V+Y T++  LC   R+ E  DL+ +M+    L         
Sbjct: 267 DSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP 326

Query: 314 ---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                D G  E+A  L   M   GC P+V TYTA+++G C  G L  A  +  +M   G 
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 386

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PNTV+Y A +N L  N +   A  ++N       +PN +TY+ ++ G    G   +A  
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           V+  M+++G     V  N +I+  C  G    A + +    + GC  +  ++T LI GFC
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +   +E A  L ++M      P+ VTYT +ID   K+ +++ AT L+  M   G  P V 
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKV 608
           TY  +IH   +        +L + M+ +        Y  +I+ LC  G    A ++  K+
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
           +      +  T   L+ +   +G    A  +   +    LIPD     K+ E  I+ GK 
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 686

Query: 669 EEADTLMLRFVERGHIQP 686
           E A   + R ++ G  QP
Sbjct: 687 EHAFNFLGRMIKAG-CQP 703



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 219/442 (49%), Gaps = 40/442 (9%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           + A R+   M  +G  C P  ++Y  L+     +G L+ A+ +   M +  V PN +  N
Sbjct: 337 EDAWRLFVDMKNKG--CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             I++LV   ++  A   L  M   G +PN++TYN +IKGYC L   K A+ +++ M  +
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
           G S + V+Y T++   C                       D G    A  +++ M   GC
Sbjct: 455 GHSANLVTYNTIIKGYC-----------------------DSGNTTSALRILDLMRDGGC 491

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PD  +YT ++ GFC++ +++ A  +  +M   G  PN V+YTA ++G C + K   A  
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           ++   +     PN  TY+V++HGL ++   S A ++ + M+++G FP  V    +I  LC
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + G    A +   + + +GC  N++ ++SLIR   Q+G +EEA +L  ++      PD +
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY  +I+A   +G+VE A   + +M+  G  PT+ TY  +I                E +
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN-----------EYL 720

Query: 576 LSKQKCRTAYNQVIENLCSFGY 597
           L+ Q+   A   V+ N CSFGY
Sbjct: 721 LADQRL-AALPDVVPN-CSFGY 740



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 182/370 (49%), Gaps = 11/370 (2%)

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           ++M   G  P+++ Y AV+N  C+ G +  A+ ++++++     P+T +YT+ + G C  
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
                A ++ N   +E   PN +TYS +++GL   G+++EA D++REM+  G  PT    
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTC 323

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
              I +LC  G  + A +   +  NKGC  NV  +T+LI G C  G L+ A+ L   M  
Sbjct: 324 TGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR 383

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+TVTY  +I+ L +N R++ A  ++  M   G  P +VTY  +I  YC +G  + 
Sbjct: 384 DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443

Query: 568 LLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            + ++  ML +        YN +I+  C  G    A +IL  +     K D  +   L+ 
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG--KSEEADTL--MLRFVER 681
            +        A+ +   M +  L P+     +V+   +++G  K E+ DT   +L  ++R
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPN-----EVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 682 GHIQPKSEEH 691
              +P  + +
Sbjct: 559 SGCRPNVQTY 568



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 189/437 (43%), Gaps = 41/437 (9%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A R+L LM   G  C+P+ +SY  L+  + +  K+ +A  + + M    + PN +     
Sbjct: 479 ALRILDLMRDGG--CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTAL 536

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I       KL  A   LE M+ +G  PNV TYN LI G    +    A +L   M  +G 
Sbjct: 537 IDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKE 325
            P+ V+Y  ++  LCK        ++  KM+    L               +G++EEA+ 
Sbjct: 597 FPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAEN 656

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L  ++ + G IPD +TY  ++  +   G+++ A   L +M   GC+P   +Y   + GL 
Sbjct: 657 LFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLK 716

Query: 386 HNGKSLEAR-----EMINTSEEEWWTPNAITYSV-------------------VMHGLRR 421
           +     + R     +++      + T +    SV                   ++  L  
Sbjct: 717 NEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLST 776

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            G+  EA +++  M+ +G  P     N L+ SL R   +D A    +    +GC V++  
Sbjct: 777 AGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNG 836

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +  LI   CQ    +EA    ++M +   +PD V    +ID L ++G  +   E +  M 
Sbjct: 837 YKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIME 896

Query: 542 SKGLVPTVVTYRTVIHR 558
           ++  +P+   Y T++ R
Sbjct: 897 TRRYMPSFHIY-TILAR 912



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 142/346 (41%), Gaps = 31/346 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  M++ L K      A  +   M  +G  C P   +Y  L+ A  + GK+  A  + 
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQG--CLPNLLTYSSLIRALGQEGKVEEAENLF 658

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + +++  + P+ +     I   ++  K+  A  FL RM  AG  P + TY  LIKG  + 
Sbjct: 659 AELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718

Query: 260 HRIKDA--IKLIDEMPLKGCS-------PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
           + + D     L D +P   CS        D VS  +         ++ E+   +   V +
Sbjct: 719 YLLADQRLAALPDVVP--NCSFGYQTTDQDAVSVMSA--------KLAELDPGLSVQVQN 768

Query: 311 ---SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
              SNL    GR  EA EL+  M   G  PD   Y +++    RV  +D A  + + M  
Sbjct: 769 ALVSNL-STAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC+ +   Y   +  LC   +  EAR          W P+ +  +V++ GL R+G    
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
             + +  M  + + P+      +   L RE     + K +  C+ K
Sbjct: 888 CMEFLHIMETRRYMPS----FHIYTILAREASKKRSWKHVAGCITK 929


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 152/589 (25%), Positives = 268/589 (45%), Gaps = 54/589 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           + I Y  +++ L      Q A  +++ MA+ G  C P+  S+  V   + + G++  A  
Sbjct: 226 NAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 285

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +++ M +  V P+++  N+ +  L     + KA   L +M   G+ P+ LTY  +I GY 
Sbjct: 286 LINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYS 345

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND------- 310
                K++ K+  +M  KG  P  V++ + M  LCK  R K+  ++ + M          
Sbjct: 346 CSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLV 405

Query: 311 ------------------SNLFHD----------------------QGRIEEAKELVNQM 330
                             +NLFH                       +G ++EA  +  +M
Sbjct: 406 SYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM 465

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              G  PDVVTY+ +++ FCR+G L  A +   QM   G +PNTV Y + ++G C +G  
Sbjct: 466 QGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDL 525

Query: 391 LEAREMINTSEEEWWT-PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
           ++A+E+++    +    PN + +S ++H L  EG++ +A DV   ++  G  PT V  N 
Sbjct: 526 VKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNS 585

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI   C  GKM+ A   +   ++ G   +VV + +L+ G+C+ G +++ L L  +M   K
Sbjct: 586 LIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKK 645

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P TVTY+ ++D L   GR   A ++  +M+  G    + TY+ ++   C+    ++ +
Sbjct: 646 VKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAI 705

Query: 570 KLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            L  K L    C+   T  N VI  L      EEA  +   +  +    + ST  V++ +
Sbjct: 706 TLFHK-LGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHN 764

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
            L +G    A  +   M      P  +L   +   L+ +G   +A   M
Sbjct: 765 LLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYM 813



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 128/490 (26%), Positives = 235/490 (47%), Gaps = 28/490 (5%)

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG--ITPNVLTYNCLIKG 255
           +L  M      PN +  NT I  L   ++  +AL  ++RM   G   +P+V+++N +I G
Sbjct: 214 LLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 273

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           +     +  A  LI+EM  KG  PD V+Y +++  LCK +                    
Sbjct: 274 FFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKAR-------------------- 313

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
               +++A+ ++ QM   G  PD +TYTA+++G+   G   ++ KM ++M   G  P  V
Sbjct: 314 ---AMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIV 370

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           ++ +F++ LC +G+S +A E+      +   P+ ++YS+++HG   EG+ ++  ++   M
Sbjct: 371 TFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSM 430

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
             KG        N+LI +  + G MD A     E   +G   +VV +++LI  FC+ G L
Sbjct: 431 ADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRL 490

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV-PTVVTYRT 554
            +A+     M     +P+TV Y ++I     +G + +A EL+ +M+SKG+  P +V + +
Sbjct: 491 ADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSS 550

Query: 555 VIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +IH  C  GRV D   +   +  +  +     +N +I+  C  G +E+A  +L  ++   
Sbjct: 551 IIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVG 610

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
            + D  T + LV  Y   G       +   M ++ + P       V + L   G++  A 
Sbjct: 611 IEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAK 670

Query: 673 TLMLRFVERG 682
            +    ++ G
Sbjct: 671 KMFHEMIDSG 680



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 234/478 (48%), Gaps = 27/478 (5%)

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK-LIDEMPLKGCSPDKVSYYTVMGYL 291
           F  R+  AG+    +  N  +K  C   R  +A+  L+  M   GC P+ +SY TV+  L
Sbjct: 178 FFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSL 237

Query: 292 CKEKRIKEVRDLMEKMVNDS--------------NLFHDQGRIEEAKELVNQMSQMGCIP 337
           C + R +E  D++++M  +               + F  QG + +A  L+N+M Q G  P
Sbjct: 238 CGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEP 297

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           DVVTY ++V+  C+   +D+A+ +L+QM   G +P+ ++YTA ++G   +G   E+ +M 
Sbjct: 298 DVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMF 357

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
                +   P  +T++  M  L + G+  +A ++ + M  KG  P  V  ++L+     E
Sbjct: 358 RKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATE 417

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G+            +KG   N   F  LI    ++G ++EA+ +  +M      PD VTY
Sbjct: 418 GRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTY 477

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           +T+I A  + GR+ +A E   +M+S GL P  V Y ++IH +C  G +    +L+ +M+S
Sbjct: 478 STLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMS 537

Query: 578 KQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
           K   R     ++ +I +LC+ G + +A  +   V+    +    T + L++ Y   G   
Sbjct: 538 KGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKME 597

Query: 635 LAYKVACRMFNRNLIPDLKLCKKVSERLILEG--KSEEADTLMLRFVERGH--IQPKS 688
            A+ V   M +  + PD+     V+   ++ G  KS + D  ++ F E  H  ++P +
Sbjct: 598 KAFGVLDAMVSVGIEPDV-----VTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTT 650



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/545 (24%), Positives = 250/545 (45%), Gaps = 56/545 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + Y  +++ L K +    A+ VLR M  +G+E  P+  +Y  +   YS +G  + +  
Sbjct: 298 DVVTYNSIVDALCKARAMDKAELVLRQMVDKGVE--PDGLTYTAIIHGYSCSGHWKESAK 355

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M    + P ++  N+ +  L    +   A    + M   G  P++++Y+ L+ GY 
Sbjct: 356 MFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYA 415

Query: 258 DLHRIKD-----------------------------------AIKLIDEMPLKGCSPDKV 282
              R  D                                   A+ +  EM  +G  PD V
Sbjct: 416 TEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVV 475

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFHD-------QGRIEEAKELVNQM 330
           +Y T++   C+  R+ +  +   +M++     ++ ++H         G + +AKELV++M
Sbjct: 476 TYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEM 535

Query: 331 SQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
              G   P++V ++++++  C  G +  A  +   + H G +P  V++ + ++G C  GK
Sbjct: 536 MSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK 595

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A  +++        P+ +TY+ ++ G  + GK+ +   + REM+ K   PT V  ++
Sbjct: 596 MEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSI 655

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           ++  L   G+   AKK   E ++ G AV++  +  L++G C+    +EA++L   +    
Sbjct: 656 VLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 715

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
              D     T+I+AL K  R EEA +L   + + GLVP V TY  +IH   + G VE+  
Sbjct: 716 CKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEAD 775

Query: 570 KLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            +   M  K  C  +    N +I  L   G + +AG  + KV  T    +AST  +L+  
Sbjct: 776 TMFSSM-EKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSL 834

Query: 627 YLNKG 631
           + +KG
Sbjct: 835 FSSKG 839



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 182/450 (40%), Gaps = 83/450 (18%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++L   +          +   MA +GI      F+ L+ A+++ G +  AM V 
Sbjct: 403 DLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVF 462

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + MQ   V P+++  +T I       +LA A+    +M   G+ PN + Y+ LI G+C  
Sbjct: 463 TEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMH 522

Query: 260 HRIKDAIKLIDEMPLKGCS-PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
             +  A +L+ EM  KG   P+ V + +++  LC E R+ +  D+   +++         
Sbjct: 523 GDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVT 582

Query: 312 -NLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            N   D     G++E+A  +++ M  +G  PDVVTY  +V+G+C+ G++D    + ++M 
Sbjct: 583 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREML 642

Query: 367 HHGCKPNTVS-----------------------------------YTAFLNGLCHNG--- 388
           H   KP TV+                                   Y   L GLC N    
Sbjct: 643 HKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTD 702

Query: 389 --------------------------------KSLEAREMINTSEEEWWTPNAITYSVVM 416
                                           +  EA ++          PN  TY V++
Sbjct: 703 EAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMI 762

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
           H L +EG + EA  +   M K G  P+   +N +I+ L ++G +  A  +M +      +
Sbjct: 763 HNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIIS 822

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +     + L+  F  KG   E +  L   Y
Sbjct: 823 LEASTTSLLMSLFSSKGKHREQIKFLPAKY 852



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 180/407 (44%), Gaps = 49/407 (12%)

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           EEA   V  +S       V TY  +++  CR    D       ++   G +  T+    F
Sbjct: 145 EEAGPRVAPLS-------VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTF 197

Query: 381 LNGLCH------------------------------------NGKSLEAREMINTSEEEW 404
           L  LCH                                    + +S EA +M+    +E 
Sbjct: 198 LKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEG 257

Query: 405 W--TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
              +P+ ++++ V+HG  ++G++S+AC+++ EMV+KG  P  V  N ++ +LC+   MD 
Sbjct: 258 GRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDK 317

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A+  +++ ++KG   + + +T++I G+   G  +E+  +   M      P  VT+ + + 
Sbjct: 318 AELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMS 377

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK---Q 579
           +L K+GR ++A E+   M +KG +P +V+Y  ++H Y   GR  D+  L   M  K    
Sbjct: 378 SLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVA 437

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
            C   +N +I      G ++EA  +  ++     + D  T   L+ ++   G    A + 
Sbjct: 438 NCH-CFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEK 496

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
             +M +  L P+  +   +     + G   +A  L+   + +G  +P
Sbjct: 497 FSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRP 543


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 226/466 (48%), Gaps = 33/466 (7%)

Query: 154 TKLCQGAK-----RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVA 208
           + LC  AK     ++   M + G E     +S ++    + G    A+ +L  M++    
Sbjct: 18  SGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCK 77

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           PN++  NT I  L     + +A+ F   M   GI P+V TY+ ++ G+C+L R+ +A  L
Sbjct: 78  PNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSL 137

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVN 328
             +M  +   P+KV++  ++  LCK++ I E   + E                       
Sbjct: 138 FKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFE----------------------- 174

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            M++ G  PDV TY A+V+G+C   ++D+A+K+   M   GC PN  SY   +NG C +G
Sbjct: 175 TMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSG 234

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EA+ ++     +  TP+  TYS +M G  + G+  EA ++++EM   G  P  +  +
Sbjct: 235 RIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYS 294

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           +++  LC+ G +D A + ++         N+  +T LI G C  G LE A  L  ++++ 
Sbjct: 295 IVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVK 354

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P  VTYT +I  L K G   EA EL  +M   G +P   TY  +I  + + G   + 
Sbjct: 355 GIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNA 414

Query: 569 LKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           ++L+E+M+ K      ++           LE + +I+ + +R +S+
Sbjct: 415 VRLIEEMVGK-----GFSADSSTFRMLSDLESSDEIISQFMRGSSQ 455



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 213/435 (48%), Gaps = 30/435 (6%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G+ P ++T+N L+ G C   +I DA+KL DEM   G  PD ++Y T++  LCK       
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCK------- 57

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                            G    A +L+ +M + GC P+VV Y  +++  C+   + +A  
Sbjct: 58  ----------------MGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMD 101

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
              +M   G  P+  +Y++ L+G C+ G+  EA  +     E    PN +T+++++ GL 
Sbjct: 102 FFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLC 161

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           ++  +SEA  V   M +KG  P     N L+   C   +MD A+K       KGCA NV 
Sbjct: 162 KKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVR 221

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
           ++  LI G C+ G ++EA  LL +M      PD  TY+T++    + GR +EA EL+ +M
Sbjct: 222 SYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEM 281

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYL 598
            S GL+P ++TY  V+   C+ G +++  +LL+ M     +     Y  +IE +C+FG L
Sbjct: 282 CSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKL 341

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           E A ++   +     +    T  V++   L  G+       AC +F R +  +  L    
Sbjct: 342 EAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLS----NEACELF-REMAVNGCLPNSC 396

Query: 659 SERLILEGKSEEADT 673
           +  +I++G     DT
Sbjct: 397 TYNVIIQGFLRNGDT 411



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 208/443 (46%), Gaps = 32/443 (7%)

Query: 115 LRSQADERVALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGI 172
           L S+A    A++ F   D   +  H+P  I Y  ++  L K      A ++L+ M  +G 
Sbjct: 20  LCSKAKIMDAVKLF---DEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKG- 75

Query: 173 ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
            C+P   +Y  ++ +  +   +  AM   S M K  + P++   ++ +H      ++ +A
Sbjct: 76  -CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEA 134

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
               ++M    + PN +T+  LI G C    I +A  + + M  KG  PD  +Y  ++  
Sbjct: 135 TSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDG 194

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            C                        + +++EA++L N M + GC P+V +Y  ++NG C
Sbjct: 195 YC-----------------------SRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHC 231

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           + G +D+AK +L +M H    P+  +Y+  + G C  G+  EA+E++         PN I
Sbjct: 232 KSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLI 291

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TYS+V+ GL + G L EA ++++ M +    P      +LI+ +C  GK++ A++     
Sbjct: 292 TYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNL 351

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
             KG    VV +T +I G  + G   EA  L  +M +    P++ TY  II    +NG  
Sbjct: 352 FVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDT 411

Query: 531 EEATELMMKMLSKGLVPTVVTYR 553
             A  L+ +M+ KG      T+R
Sbjct: 412 PNAVRLIEEMVGKGFSADSSTFR 434



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 182/362 (50%), Gaps = 16/362 (4%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           + + + Y  +++ L K +L   A      M + GI   P+ F+Y  ++  +   G++  A
Sbjct: 77  KPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIP--PDVFTYSSILHGFCNLGRVNEA 134

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +   M +  V PN +     I  L     +++A    E M   G+ P+V TYN L+ G
Sbjct: 135 TSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDG 194

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---- 311
           YC   ++ +A KL + M  KGC+P+  SY  ++   CK  RI E + L+ +M + S    
Sbjct: 195 YCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPD 254

Query: 312 --------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                     F   GR +EA+EL+ +M   G +P+++TY+ V++G C+ G LD+A ++L+
Sbjct: 255 IFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLK 314

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M     +PN   YT  + G+C  GK   ARE+ +    +   P  +TY+V++ GL + G
Sbjct: 315 AMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGG 374

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
             +EAC++ REM   G  P     N++IQ   R G    A + ++E + KG + +   F 
Sbjct: 375 LSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFR 434

Query: 484 SL 485
            L
Sbjct: 435 ML 436



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 2/150 (1%)

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGY 597
           M   GL PT+VT+ T++   C   ++ D +KL ++M  +  +     Y+ +I  LC  G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
              A ++L K+     K +    + +++S     +   A      M    + PD+     
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 658 VSERLILEGKSEEADTLMLRFVERGHIQPK 687
           +       G+  EA +L  + VER  I  K
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNK 150


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 146/562 (25%), Positives = 264/562 (46%), Gaps = 18/562 (3%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVL-RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           ++ +++  +L+ L   K    A  +L R M   G      +++ L+       +   A+ 
Sbjct: 126 NNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALE 185

Query: 198 VLSMMQK---AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           ++ MM      +  PN++   T I  L     + +A    + M   G+ PN  TY CLI 
Sbjct: 186 LMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIH 245

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
           GY    + K+ ++++ EM   G  PD V Y  ++ YLCK  R  E R++ + ++      
Sbjct: 246 GYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKP 305

Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                    + +  +G + E    ++ M + G  PD   +  + N + +   +D+A  + 
Sbjct: 306 HVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIF 365

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            +M      P  V+Y A ++ LC  G+  +A    N    E  TP+   +S +++GL   
Sbjct: 366 DKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTV 425

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            K  +A  +  E++ +G        N+L+ +LCREG++  A++ +   L      +V+++
Sbjct: 426 DKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISY 485

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            +L+ G C  G ++EA  LLD M      PD  TY T++    K  R+++A  L  +ML 
Sbjct: 486 NTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLM 545

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS-KQKCRT-AYNQVIENLCSFGYLEE 600
           KGL P VVTY T++H   Q+GR  +  +L   M++ ++KC    Y  ++  LC   +++E
Sbjct: 546 KGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDE 605

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           A K+   +     + D  T ++++ + L  G    A  +   +    L+PD++  + ++E
Sbjct: 606 AFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAE 665

Query: 661 RLILEGKSEEADTLMLRFVERG 682
            LI EG  EE D L     E G
Sbjct: 666 NLIKEGSLEELDELFSAMEENG 687



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 233/528 (44%), Gaps = 14/528 (2%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           +A+E + L      D    +  + + Y  +++ L K ++   AK V + M  +G+     
Sbjct: 179 RAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNH 238

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            ++ L+  Y   GK +  + +L  M    + P+ +I    +  L    +  +A    + +
Sbjct: 239 TYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSL 298

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              GI P+V  Y  L+ GY     + +    +D M   G SPD   +  +     K+  I
Sbjct: 299 IRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMI 358

Query: 298 KEVRDLMEKM---------VNDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            E   + +KM         VN   L       GR+++A    NQM   G  PD+  ++++
Sbjct: 359 DEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSL 418

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           V G C V + ++A+K+  ++   G + N   +   +  LC  G+ +EA+ +I+       
Sbjct: 419 VYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDV 478

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+ I+Y+ ++ G    G++ EA  ++  MV  G  P     N L+   C+  ++D A  
Sbjct: 479 RPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYS 538

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             +E L KG    VV + +++ G  Q G   EA  L  +M   ++  D  TYT I++ L 
Sbjct: 539 LFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLC 598

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-- 583
           +N  V+EA ++   + SK L   + T   +I    + GR ED + L   + +        
Sbjct: 599 RNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVE 658

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            Y  + ENL   G LEE  ++   +    +  ++   + LV   L++G
Sbjct: 659 TYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRG 706



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 101/450 (22%), Positives = 183/450 (40%), Gaps = 85/450 (18%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D ++Y ++L+ L K   C  A+ +   + R+GI+     +  L+  Y+  G L      L
Sbjct: 271 DCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFL 330

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +  V+P+  I N   +       + +A+   ++M+   ++P V+ Y  LI   C L
Sbjct: 331 DLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKL 390

Query: 260 HRIKDAIKLIDEMPLKGCSPD----------------------------------KVSYY 285
            R+ DA+   ++M  +G +PD                                    +++
Sbjct: 391 GRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFF 450

Query: 286 TV-MGYLCKEKRIKEVRDLMEKM--------VNDSNLFHD----QGRIEEAKELVNQMSQ 332
            + M  LC+E R+ E + L++ M        V   N   D     GRI+EA +L++ M  
Sbjct: 451 NILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVS 510

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY--------------- 377
           +G  PD  TY  +++G+C+   +D A  + ++M   G  P  V+Y               
Sbjct: 511 IGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCE 570

Query: 378 --------------------TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
                               T  LNGLC N    EA +M  +   +    +  T ++++ 
Sbjct: 571 AKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIG 630

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
            L + G+  +A D+   +   G  P      L+ ++L +EG ++   +        G A 
Sbjct: 631 ALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAP 690

Query: 478 NVVNFTSLIRGFCQKGDLEEA---LSLLDD 504
           N     +L+R    +GD+  A   LS LD+
Sbjct: 691 NSRMLNALVRWLLHRGDIGRAGVYLSKLDE 720



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 179/428 (41%), Gaps = 24/428 (5%)

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + DA+KL DEM L    P  V  +  +  +    R     +L+  + N            
Sbjct: 32  LDDALKLFDEM-LTYARPASVRTFNRLLTVVSRARCSSASELVVSLFN------------ 78

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK-PNTVSYTAF 380
               ++ + S +   P   TYT ++  FCR+G L         +   G    NTV +   
Sbjct: 79  ---RMIRECS-VKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQL 134

Query: 381 LNGLCHNGKSLEAREMINTSEEEWW-TPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
           L GLC   +  EA +++     E+  T N I+Y++++ GL  E +  EA +++  M   G
Sbjct: 135 LKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDG 194

Query: 440 ---FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
                P  V    +I  LC+   +D AK   Q  ++KG   N   +T LI G+   G  +
Sbjct: 195 DGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWK 254

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           E + +L +M      PD V Y  ++D L KNGR  EA  +   ++ KG+ P V  Y  ++
Sbjct: 255 EVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILL 314

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           H Y   G + ++   L+ M+          +N +         ++EA  I  K+ +    
Sbjct: 315 HGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLS 374

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
                   L+++    G    A     +M N  + PD+ +   +   L    K E+A+ L
Sbjct: 375 PGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKL 434

Query: 675 MLRFVERG 682
               +++G
Sbjct: 435 FFEVLDQG 442



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 156/347 (44%), Gaps = 23/347 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  V+  ++  L      + A+++   +  +GI      F+ LM    R G++  A  ++
Sbjct: 411 DIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLI 470

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +  V P+++  NT +    +  ++ +A + L+ M   G+ P+  TYN L+ GYC  
Sbjct: 471 DLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKA 530

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            RI DA  L  EM +KG +P  V+Y T++  L +  R  E ++L   M+N+         
Sbjct: 531 RRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINN--------- 581

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                       +  C  D+ TYT ++NG CR   +D+A KM Q +     + +  +   
Sbjct: 582 ------------RRKC--DIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINI 627

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +  L   G+  +A ++  T       P+  TY ++   L +EG L E  ++   M + G
Sbjct: 628 MIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENG 687

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
             P    +N L++ L   G +  A  ++ +   K  ++     + LI
Sbjct: 688 TAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLI 734


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 240/519 (46%), Gaps = 101/519 (19%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           RAG+LR+A+ V   M  A   P+ L     +H L    +L  A++ L+ M  A   P+  
Sbjct: 17  RAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNT 75

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           T   +++  C   R+ DA +L++EM  +G + + ++Y  ++  LCK +R+          
Sbjct: 76  TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERL---------- 125

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                        +EA  LV  M++ GC P VVTY +++ GFCR   +D+A   ++QM  
Sbjct: 126 -------------DEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVA 172

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+ ++YTA + G C +       E++       +TP+ +TYS V+ GL + G+L +
Sbjct: 173 EGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRD 232

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A D+  EM      PT +  N LI   CR G MD A + + + ++  CA +VV +T+L+ 
Sbjct: 233 AVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMS 289

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML------ 541
            FC+ G L++A  L   M   K  PD VT+T+++D L   GR+E+A EL+ ++       
Sbjct: 290 AFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 349

Query: 542 -----------------------------SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
                                        S+G VP  VTY  ++   C+ GR +  L+ L
Sbjct: 350 TIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYL 409

Query: 573 EKMLSKQ-KCRTA---YNQVIENLC----------------SFGYL-------------- 598
           +++ S+   C T+   Y  +++ LC                  GY+              
Sbjct: 410 DQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALC 469

Query: 599 -----EEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
                ++A ++L ++++        TC  +V +Y   G+
Sbjct: 470 KAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGM 508



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 230/459 (50%), Gaps = 35/459 (7%)

Query: 155 KLCQG-----AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAP 209
            LC G     A+ ++  M  RG+      +S L+    +  +L  A+ ++  M +   AP
Sbjct: 83  SLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAP 142

Query: 210 NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
            ++  N+ I       ++ +A  F+E+M   G  P+++TY  LI G+C    +   ++L+
Sbjct: 143 TVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELL 202

Query: 270 DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQ 329
            E+  +G +PD V+Y TV+  LCK  R+++  D+ E                        
Sbjct: 203 GEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE------------------------ 238

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
             +M C P  +TY +++ G+CR G++D+A ++L +M    C P+ V+YT  ++  C  G+
Sbjct: 239 --EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGR 296

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A E+         +P+ +T++ ++ GL  EG++ +A +++ E+ ++G  PT    N 
Sbjct: 297 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 356

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL-C 508
           ++   C+  ++  A++ + +  ++G   N V +  L+ G C+ G  ++AL  LD +    
Sbjct: 357 VVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 416

Query: 509 KKDPDTVT-YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
              P +V  Y  I+DAL ++GR ++A +   +M+ +G VP   T+ TV+   C+  + + 
Sbjct: 417 GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQ 476

Query: 568 LLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKI 604
             +LLE+M+           + V+   C  G +++A ++
Sbjct: 477 AHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 515



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/449 (22%), Positives = 214/449 (47%), Gaps = 29/449 (6%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + P  L +N +I G C   R++ A+ +  +M      PD ++Y  ++  L K +R+++  
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAV 59

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
            ++++MV+  +                       +PD  T T VV   C    +D A+++
Sbjct: 60  QVLQEMVSARH-----------------------VPDNTTLTVVVQSLCLGDRVDDAREL 96

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           +++M H G   N ++Y+A ++GLC   +  EA  ++ T  E    P  +TY+ ++ G  R
Sbjct: 97  VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCR 156

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
             ++ EA   + +MV +G  P  +    LI   C+   +    + + E   +G   ++V 
Sbjct: 157 ARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVT 216

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           ++++I G C+ G L +A+ + ++M      P  +TY ++I    + G ++EA  L+ KM+
Sbjct: 217 YSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMV 273

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLE 599
                P VVTY T++  +C++GR++D  +L ++M++ +       +  +++ LC  G +E
Sbjct: 274 DDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRME 333

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           +A ++L ++ R        T + +V+ Y        A ++     +R  +P+      + 
Sbjct: 334 DALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILV 393

Query: 660 ERLILEGKSEEADTLMLRFVERGHIQPKS 688
                 G++++A   + +    G   P S
Sbjct: 394 AGCCRAGRTDQALQYLDQLNSEGGPCPTS 422


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 254/507 (50%), Gaps = 25/507 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS L  A ++  +    + +   M+   +A NL   +  I+      KL  A   + ++ 
Sbjct: 91  FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  PN +T++ LI G C   R+ +A++L+D M   G  PD ++  T++  LC      
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL----- 205

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                              G+  EA  L+++M + GC P+ VTY  V+N  C+ G+   A
Sbjct: 206 ------------------SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            ++L++M     K + V Y+  ++GLC +G    A  + N  E +  T N ITY++++ G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
               G+  +   ++R+M+K+   P  V  ++LI S  +EGK+  A++  +E +++G A +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            + +TSLI GFC++  L++A  ++D M     DP+  T+  +I+   K  R+++  EL  
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFG 596
           KM  +G+V   VTY T+I  +C++G++    +L ++M+S++       Y  +++ LC  G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
             E+A +I  K+ ++  + D    ++++    N      A+ + C +  + + P +K   
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547

Query: 657 KVSERLILEGKSEEADTLMLRFVERGH 683
            +   L  +G   EA+ L  +  E GH
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGH 574



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 235/505 (46%), Gaps = 16/505 (3%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I +  +   ++KTK       + + M  +GI       S ++  + R  KL  A   +  
Sbjct: 89  IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 148

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           + K    PN +  +T I+ L +  ++++AL  ++RM   G  P+++T N L+ G C   +
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD----- 316
             +A+ LID+M   GC P+ V+Y  V+  +CK  +     +L+ KM  + N+  D     
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYS 267

Query: 317 --------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                    G ++ A  L N+M   G   +++TY  ++ GFC  G  D   K+L+ M   
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
              PN V+++  ++     GK  EA E+          P+ ITY+ ++ G  +E  L +A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             +V  MV KG  P     N+LI   C+  ++D   +  ++   +G   + V + +LI+G
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           FC+ G L  A  L  +M   K  P+ VTY  ++D L  NG  E+A E+  K+    +   
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
           +  Y  +IH  C   +V+D   L   +  K  +     YN +I  LC  G L EA  +  
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567

Query: 607 KVLRTASKADASTCHVLVESYLNKG 631
           K+       D  T ++L+ ++L  G
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDG 592



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 210/425 (49%), Gaps = 18/425 (4%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           D+   Y   P  + Y  +L ++ K+     A  +LR M  R I+     +S ++    + 
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G L NA  + + M+   +  N++  N  I       +     + L  M    I PNV+T+
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           + LI  +    ++++A +L  EM  +G +PD ++Y +++   CKE  + +   +++ MV+
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396

Query: 310 ---DSNL---------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
              D N+         +    RI++  EL  +MS  G + D VTY  ++ GFC +G+L+ 
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           AK++ Q+M      PN V+Y   L+GLC NG+S +A E+    E+     +   Y++++H
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G+    K+ +A D+   +  KG  P     N++I  LC++G +  A+   ++    G A 
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +   +  LIR     GD  +++ L++++  C    D  T   +ID LS +GR++++    
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS-DGRLKKS---F 632

Query: 538 MKMLS 542
           + MLS
Sbjct: 633 LDMLS 637



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 182/393 (46%), Gaps = 23/393 (5%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           + ++A +L   M     +P V+ ++ + +   +  + D    + +QM   G   N  + +
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             +N  C   K   A   +    +  + PN IT+S +++GL  EG++SEA ++V  MV+ 
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  + IN L+  LC  GK   A   + + +  GC  N V +  ++   C+ G    A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           + LL  M       D V Y+ IID L K+G ++ A  L  +M  KG+   ++TY  +I  
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307

Query: 559 YCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           +C  GR +D  KLL  M+ ++       ++ +I++    G L EA ++  +++      D
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367

Query: 617 ASTCHVLV-----ESYLNKGIPLLAYKVA------CRMFN--------RNLIPD-LKLCK 656
             T   L+     E++L+K   ++   V+       R FN         N I D L+L +
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
           K+S R ++   +   +TL+  F E G +    E
Sbjct: 428 KMSLRGVV-ADTVTYNTLIQGFCELGKLNVAKE 459


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 263/569 (46%), Gaps = 24/569 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D   Y ++L+ L      Q A  +LR+MA+    C P+  +Y  V   + + GK+  A  
Sbjct: 78  DAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACN 137

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +    P+++  N+ I+ L     +  A   L +M   G+ PN +TY  +I GY 
Sbjct: 138 LYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYS 197

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN----- 312
            L R ++A K+  EM  +G  PD VS+ + M  LCK  R KE  ++   M    +     
Sbjct: 198 TLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIV 257

Query: 313 ----LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
               L H    +G   +     N M   G + + + +T +++ + + G +D+A  +L +M
Sbjct: 258 TYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEM 317

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  P+  +Y+  ++ LC  G+  +A +  N        PN + Y  ++ G    G L
Sbjct: 318 QGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDL 377

Query: 426 SEACDVVREMVKKGF-FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
            +A ++V EM+  G   P     N ++ S+C+EG++  A        + G   +++ F +
Sbjct: 378 VKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNT 437

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G+C  G++ +A S+LD M      PDT TY T+++   K+GR+++   L  +M  K 
Sbjct: 438 LIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKK 497

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-----AYNQVIENLCSFGYLE 599
           + PT VTY  ++    + GR     K+L +M+    C T      YN +++ LC     +
Sbjct: 498 IKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIG---CGTTVSLPTYNIILKGLCRNNCTD 554

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           EA  +  K+     K + +T + ++ S         A  +   + +  L+P+      + 
Sbjct: 555 EAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMI 614

Query: 660 ERLILEGKSEEADTLMLRFVERGHIQPKS 688
             L+ EG  EEAD  M   +E+    P S
Sbjct: 615 RNLLKEGSVEEADN-MFSSMEKSGCAPCS 642



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 209/440 (47%), Gaps = 18/440 (4%)

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK-LIDEMPLKGCSPDKVSYYTVM 288
            L F  R+   G+  +    N ++K  C   R  DA+K L+  M   GC PD  SY  V+
Sbjct: 27  GLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVL 86

Query: 289 GYLCKEKRIKEVRDLMEKMVNDSNL--------------FHDQGRIEEAKELVNQMSQMG 334
             LC + R ++  DL+  M  +  +              F  +G+I +A  L ++M Q G
Sbjct: 87  KRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQG 146

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            +PDVVT+ +++N  C+   +D A+ +L+QM  +G  PN V+YT+ ++G    G+  EA 
Sbjct: 147 FVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEAT 206

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +M          P+ ++++  M  L + G+  EA ++   M  KG  P  V   +L+   
Sbjct: 207 KMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGY 266

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
             EG       F       G   N + FT LI  + ++G ++EA+ +L +M      PD 
Sbjct: 267 ATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDV 326

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            TY+T+I AL + GR+ +A +   +M+  G+ P  V Y ++I  +C  G +    +L+ +
Sbjct: 327 FTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYE 386

Query: 575 MLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           M++    R     +N ++ ++C  G + +A  I   V     ++D    + L++ Y   G
Sbjct: 387 MMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVG 446

Query: 632 IPLLAYKVACRMFNRNLIPD 651
               A+ V   M +  + PD
Sbjct: 447 EMGKAFSVLDAMISAGIGPD 466



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/484 (22%), Positives = 217/484 (44%), Gaps = 15/484 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y  M+   S     + A ++ R M  RG+     +++  M +  + G+ + A  + 
Sbjct: 185 NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIF 244

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M      PN++     +H        A  + F   M+  GI  N L +  LI  Y   
Sbjct: 245 YSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKR 304

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
             + +A+ ++ EM  +G SPD  +Y T++  LC+  R+ +  D   +M+      ++ ++
Sbjct: 305 GMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVY 364

Query: 315 HD-------QGRIEEAKELVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
           H         G + +AKELV +M   G   P++  + ++V+  C+ G +  A  +   + 
Sbjct: 365 HSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVK 424

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G + + + +   ++G C  G+  +A  +++        P+  TY+ +++G  + G++ 
Sbjct: 425 DIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRID 484

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +  ++ REM  K   PT V  N+++  L R G+   A+K + E +  G  V++  +  ++
Sbjct: 485 DGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIIL 544

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           +G C+    +EA+ +   +       +  T  T+I+++    R EEA +L   +   GLV
Sbjct: 545 KGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLV 604

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKI 604
           P   TY  +I    + G VE+   +   M       C    N  I  L   G + +AG  
Sbjct: 605 PNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNY 664

Query: 605 LGKV 608
           + KV
Sbjct: 665 MSKV 668



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 200/437 (45%), Gaps = 18/437 (4%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A + FY    +  +R + + Y ++L   +              M   GI      F+ L+
Sbjct: 240 AAEIFYSMAAKG-HRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILI 298

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
            AY++ G +  AM +LS MQ   ++P++   +T I  L    +LA A+    +M   G+ 
Sbjct: 299 DAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQ 358

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY-TVMGYLCKEKRIKE--- 299
           PN + Y+ LI+G+C    +  A +L+ EM   G     ++++ +++  +CKE R+ +   
Sbjct: 359 PNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHH 418

Query: 300 ----VRDLMEKMVNDSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
               V+D+ E+  +D  +F+         G + +A  +++ M   G  PD  TY  +VNG
Sbjct: 419 IFDLVKDIGER--SDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNG 476

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
           + + G +D    + ++M     KP TV+Y   L+GL   G+++ A++M++       T +
Sbjct: 477 YFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVS 536

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
             TY++++ GL R     EA  + +++           +N +I S+    + + AK    
Sbjct: 537 LPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFS 596

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
              + G   N   +  +IR   ++G +EEA ++   M      P +      I  L + G
Sbjct: 597 AISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKG 656

Query: 529 RVEEATELMMKMLSKGL 545
            + +A   M K+  K +
Sbjct: 657 EIVKAGNYMSKVDGKSI 673



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 166/369 (44%), Gaps = 26/369 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRNAMY 197
           + +VY+ +++          AK ++  M   GI  RP    F+ ++ +  + G++ +A +
Sbjct: 360 NTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIP-RPNIAFFNSIVHSICKEGRVMDAHH 418

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +  +++      ++++ NT I    +  ++ KA   L+ M  AGI P+  TYN L+ GY 
Sbjct: 419 IFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYF 478

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              RI D + L  EM  K   P  V+Y  ++  L +                        
Sbjct: 479 KSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFR-----------------------A 515

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR   A++++++M   G    + TY  ++ G CR    D+A  M Q++     K N  + 
Sbjct: 516 GRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTL 575

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              +N +    +  EA+++ +   +    PNA TY +++  L +EG + EA ++   M K
Sbjct: 576 NTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEK 635

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G  P    +N  I++L  +G++  A  +M +   K  ++     + L+  F  KG+  E
Sbjct: 636 SGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKSISLEASTSSLLLSLFSGKGNYRE 695

Query: 498 ALSLLDDMY 506
            + LL   Y
Sbjct: 696 QIQLLPVKY 704



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 116/284 (40%), Gaps = 44/284 (15%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P   TY VVM+G  R  +          +++ G        N +++ LC   + D A K 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 467 MQECLNK-GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY----LCKKDPDTVTYTTII 521
           +   + + GC  +  ++  +++  C     ++AL LL  M     +C   PD VTY T+I
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCS--PDVVTYNTVI 123

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--Q 579
               K G++ +A  L  +M+ +G VP VVT+ ++I+  C+   V++   LL +M+     
Sbjct: 124 HGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVP 183

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
             +  Y  +I    + G  EEA K+  +                                
Sbjct: 184 PNKVTYTSMIHGYSTLGRWEEATKMFRE-------------------------------- 211

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
              M  R LIPD+       + L   G+S+EA  +      +GH
Sbjct: 212 ---MTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGH 252


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 263/583 (45%), Gaps = 78/583 (13%)

Query: 80  EVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRH 139
           EV  +I+  +   P LE ++      L P  +  ++++  +  +  +FF WA +  R R 
Sbjct: 35  EVLTIIDSVNPIEPALESKVP----FLSPSIVTYIIKNPPNSLLGFRFFIWASKFRRLR- 89

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
             + + M++++L K    +   +VL+ + R G     +AF+ L+ AY++   +  A+   
Sbjct: 90  SWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESF 149

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            MM+     P++   NT +HV+V    +  AL    RM      PN+ T++ LI G C  
Sbjct: 150 EMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKS 209

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            + ++A+++ DEM  +   P+K++Y  ++  LC+ +                       +
Sbjct: 210 GKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQ-----------------------K 246

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ---------------- 363
            + A  L   M   GCIPD VTY A+++GFC++G +D+A  +L+                
Sbjct: 247 ADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSC 306

Query: 364 -------------------QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
                              +M  H  KP+ + YT  + GL   GK  +A  ++N   E  
Sbjct: 307 LIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERG 366

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P+   Y+ ++ G    G L EA  +  E+ K   F +     +LI  +CR G +  A+
Sbjct: 367 LVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQ 426

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP------------ 512
           +   E    GC  +VV F +LI GFC+ G++E+A  L   M + +               
Sbjct: 427 QIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRV 486

Query: 513 -DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
            DT +  T+++ L  +G + +A  ++M++   G  P ++TY  +IH +C+ G +    KL
Sbjct: 487 LDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKL 546

Query: 572 LEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
            +++  K        Y  +I  L S    E+A  +L ++L+  
Sbjct: 547 FKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNG 589



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 115/520 (22%), Positives = 229/520 (44%), Gaps = 77/520 (14%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N  I +L+  N      + L+ ++  G + +   +  LI+ Y  +  I+ A++  + M  
Sbjct: 95  NMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKD 154

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
             C PD  +Y TV+  + +    KEV  L                   A  + N+M ++ 
Sbjct: 155 FDCKPDVFTYNTVLHVMVR----KEVVLL-------------------ALGIYNRMLKLN 191

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C+P++ T++ +++G C+ G+   A +M  +M      PN ++YT  ++GLC   K+  A 
Sbjct: 192 CLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAY 251

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV---------------------- 432
            +    ++    P+++TY+ ++HG  + G++ EA  ++                      
Sbjct: 252 RLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGL 311

Query: 433 -------------REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
                        R+M +    P  +   ++++ L + GK   A + + E   +G   + 
Sbjct: 312 FRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDT 371

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATELM 537
             + +LI+G+C  G L+EA SL   + + K D      TYT +I  + ++G V +A ++ 
Sbjct: 372 HCYNALIKGYCDLGLLDEAKSL--HLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIF 429

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-----------LSKQKCR---- 582
            +M   G  P+VVT+  +I  +C+ G +E    L  KM           LS+   R    
Sbjct: 430 NEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDT 489

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
            +   ++E LC  G + +A  IL ++  +    +  T ++L+  +   G    A+K+   
Sbjct: 490 ASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKE 549

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +  + L PD      +   L+   + E+A T++ + ++ G
Sbjct: 550 LQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNG 589


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/447 (31%), Positives = 221/447 (49%), Gaps = 25/447 (5%)

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
           APN+   N  I  L     LA+A   L RM+  G +P+V+TYN LI GY     +++  K
Sbjct: 191 APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEK 250

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELV 327
           L+ EM   GC PD V+Y  ++   CK                        GR+E A    
Sbjct: 251 LVGEMRGCGCRPDVVTYNALVNCFCK-----------------------FGRMERAYSYF 287

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M + G + +VVT++  V+ FC+ G + +A K+  QM   G KPN V+YT  ++G C  
Sbjct: 288 AEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKA 347

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G+  +A  + N   ++    N +TY+V++ GL +EGK++EA DV R M + G     +  
Sbjct: 348 GRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLY 407

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             LI         + A   + E  +KG  ++V  + +LI G C    L+EA SLL+ M  
Sbjct: 408 TTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDE 467

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
           C   P+ V YT I+DA  K  +  EA  L+ KM+  G  P +VTY  ++   C+ G +++
Sbjct: 468 CGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDE 527

Query: 568 LLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            +    KM  L  +    AY  +++ LC  G L++A  +L +++      D   C  L++
Sbjct: 528 AISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMD 587

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDL 652
            +L +G    A+ +  +M N  L  DL
Sbjct: 588 GHLKQGNLQDAFALKAKMINSGLQLDL 614



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 214/429 (49%), Gaps = 14/429 (3%)

Query: 170 RGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           RG  CRP+  +Y  L+  + + G++  A    + M++  V  N++  +T +        +
Sbjct: 256 RGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMV 315

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
            +A++   +M++ G+ PN +TY CL+ G C   R+ DA+ L +EM  +G   + V+Y  +
Sbjct: 316 REAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVL 375

Query: 288 MGYLCKEKRIKEVRD---LMEKMVNDSN------LFHDQ---GRIEEAKELVNQMSQMGC 335
           +  LCKE ++ E  D   LME+    +N      L H        E A  L+++M   G 
Sbjct: 376 VDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGM 435

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
             DV  Y A++ G C + +LD+AK +L +M   G KPN V YT  ++      K  EA  
Sbjct: 436 ELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIA 495

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           ++    +  + PN +TY  ++ GL + G + EA     +MV  G  P       L+  LC
Sbjct: 496 LLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLC 555

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + G++D A   + E ++KG +++ V  TSL+ G  ++G+L++A +L   M       D  
Sbjct: 556 KNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLY 615

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            YT  +        ++EA E++ +M+  G+ P  V Y  +I++  ++G +E+   L  +M
Sbjct: 616 GYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675

Query: 576 LSKQKCRTA 584
            S   C  A
Sbjct: 676 ESLLSCTNA 684



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 244/547 (44%), Gaps = 41/547 (7%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           H P +   ++++L +  L  G +R             P     L+   +  G L +A+  
Sbjct: 101 HHPHLAASLVDLLHRAALALGPRR----------SALPSVVDTLLSLLADRGLLDDAVLA 150

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L+ +++  V PN   CN  +  L        A R  E++      PNV T+N +I   C 
Sbjct: 151 LARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP----APNVFTFNIMIDFLCK 206

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              + +A  L+  M   GCSPD V+Y +++ GY                           
Sbjct: 207 EGDLAEARALLARMKAIGCSPDVVTYNSLIDGY------------------------GKC 242

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G +EE ++LV +M   GC PDVVTY A+VN FC+ G +++A     +M   G   N V++
Sbjct: 243 GELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTF 302

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           + F++  C NG   EA ++      +   PN +TY+ ++ G  + G+L +A  +  EMV+
Sbjct: 303 STFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQ 362

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G     V   +L+  LC+EGK+  A+   +     G   N + +T+LI G     + E 
Sbjct: 363 QGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSER 422

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           ALSLL +M     + D   Y  +I  L    +++EA  L+ KM   GL P  V Y  ++ 
Sbjct: 423 ALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMD 482

Query: 558 RYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
              +  +  + + LL+KM+    +     Y  +++ LC  G ++EA     K++    + 
Sbjct: 483 ACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEP 542

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           +      LV+     G    A  +   M ++ +  D  +C  + +  + +G  ++A  L 
Sbjct: 543 NVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALK 602

Query: 676 LRFVERG 682
            + +  G
Sbjct: 603 AKMINSG 609



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 193/417 (46%), Gaps = 12/417 (2%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D + Y  ++    K    + A      M R G+      FS  + A+ + G +R AM 
Sbjct: 261 RPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMK 320

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           + + M+   + PN +     +       +L  AL     M   G+  NV+TY  L+ G C
Sbjct: 321 LFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLC 380

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG----YLCKEKRIKEVRDLMEK-MVNDSN 312
              ++ +A  +   M   G   +++ Y T++     Y   E+ +  + ++ +K M  D +
Sbjct: 381 KEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVS 440

Query: 313 LFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
           L+        +  +++EAK L+N+M + G  P+ V YT +++   +  +  +A  +LQ+M
Sbjct: 441 LYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKM 500

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G +PN V+Y A ++GLC  G   EA    N   +    PN   Y+ ++ GL + G+L
Sbjct: 501 MDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRL 560

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A  ++ EM+ KG     V    L+    ++G +  A     + +N G  +++  +T  
Sbjct: 561 DKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCF 620

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           + GFC    ++EA  +L +M      PD V Y  +I+   K G +EEA  L  +M S
Sbjct: 621 VWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMES 677



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 81/171 (47%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +R + + Y  +++ L K      A      M   G+E   +A++ L+    + G+L  A+
Sbjct: 505 FRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAV 564

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M    ++ + ++C + +   +    L  A     +M  +G+  ++  Y C + G+
Sbjct: 565 LLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGF 624

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           C+L+ I++A +++ EM   G +PD V Y  ++    K   ++E   L  +M
Sbjct: 625 CNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 243/508 (47%), Gaps = 25/508 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS L+ A ++  K    + +   MQ   +  N    +  ++     ++L  AL  L +M 
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMM 143

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+++T + L+ GYC   RI +A+ L+D+M   G  PD V++ T++  L       
Sbjct: 144 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGL------- 196

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                           H++    EA  L+++M   GC PD+ TY  VVNG C+ G++D A
Sbjct: 197 --------------FLHNKA--SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L++M     + N V Y   ++GLC      +A ++ N  E +   P+  TY+ ++  
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L   G+ S+A  ++ +M+++   P  V  N LI +  +EGK+  A+K   E + +    N
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 360

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +V + SLI GFC    L+EA  +   M      PD VTY T+I    K  RVEE  EL  
Sbjct: 361 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFR 420

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFG 596
           +M  +GLV   VTY T+I    Q G  +   K+ +KM+S         Y+ +++ LC +G
Sbjct: 421 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 480

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            LE+A  +   + ++  + +  T ++++E     G     + + C +  + + P++ +  
Sbjct: 481 KLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 540

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHI 684
            +      +G  EEAD L     E G +
Sbjct: 541 TMISGFCRKGLKEEADALFREMKEDGTL 568



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 239/488 (48%), Gaps = 27/488 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI      +S L+  + R  +L  A+ VL  M K    P+++  ++ ++    G +
Sbjct: 107 MQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 166

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++A+  +++M   G  P+ +T+N LI G    ++  +A+ LID M  +GC PD  +Y T
Sbjct: 167 ISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 226

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           V+  LCK   I     L++KM        ++G+IE                +VV Y  ++
Sbjct: 227 VVNGLCKRGDIDLALSLLKKM--------EKGKIE---------------ANVVIYNTII 263

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C+   +D A  +  +M   G KP+  +Y + ++ LC+ G+  +A  +++   E    
Sbjct: 264 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN +T++ ++    +EGKL EA  +  EM+++   P  V  N LI   C   ++D A++ 
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
               ++K C  +VV + +LI+GFC+   +EE + L  +M       +TVTY T+I  L +
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 443

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--- 583
            G  + A ++  KM+S G+ P ++TY  ++   C+ G++E  L + E  L K K      
Sbjct: 444 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE-YLQKSKMEPNIY 502

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            YN +IE +C  G +E+   +   +     K +      ++  +  KG+   A  +   M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 562

Query: 644 FNRNLIPD 651
                +PD
Sbjct: 563 KEDGTLPD 570



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 246/503 (48%), Gaps = 20/503 (3%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           H+   Y ++L    +      A  VL  M + G E      S L+  Y    ++  A+ +
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +  M +    P+ +  NT IH L + NK ++A+  ++RM   G  P++ TY  ++ G C 
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH 315
              I  A+ L+ +M       + V Y T++  LCK K + +  DL  KM       ++F 
Sbjct: 234 RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 293

Query: 316 ---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                    + GR  +A  L++ M +    P+VVT+ ++++ F + G+L +A+K+  +M 
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                PN V+Y + +NG C + +  EA+++      +   P+ +TY+ ++ G  +  ++ 
Sbjct: 354 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVE 413

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           E  ++ REM ++G     V  N LIQ L + G  D A+K  ++ ++ G   +++ ++ L+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 473

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C+ G LE+AL + + +   K +P+  TY  +I+ + K G+VE+  +L   +  KG+ 
Sbjct: 474 DGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM-----LSKQKCRTAYNQVIENLCSFGYLEEA 601
           P V+ Y T+I  +C+ G  E+   L  +M     L    C   YN +I      G    +
Sbjct: 534 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC---YNTLIRARLRDGDKAAS 590

Query: 602 GKILGKVLRTASKADASTCHVLV 624
            +++ ++       DAST  +++
Sbjct: 591 AELIKEMRSCGFVGDASTISMVI 613



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 222/445 (49%), Gaps = 19/445 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           Y+ D + +  ++  L        A  ++  M  RG  C+P+ F+Y  V     + G +  
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARG--CQPDLFTYGTVVNGLCKRGDIDL 239

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +L  M+K  +  N++I NT I  L     +  A     +M+  GI P+V TYN LI 
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
             C+  R  DA +L+ +M  +  +P+ V++ +++    KE ++ E   L ++M+  S   
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359

Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                    N F    R++EA+++   M    C+PDVVTY  ++ GFC+   +++  ++ 
Sbjct: 360 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELF 419

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           ++M   G   NTV+Y   + GL   G    A+++      +   P+ ITYS+++ GL + 
Sbjct: 420 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 479

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM-DGAKKFMQECLNKGCAVNVVN 481
           GKL +A  V   + K    P     N++I+ +C+ GK+ DG   F    L KG   NV+ 
Sbjct: 480 GKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSL-KGVKPNVII 538

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +T++I GFC+KG  EEA +L  +M      PD+  Y T+I A  ++G    + EL+ +M 
Sbjct: 539 YTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMR 598

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVE 566
           S G V    T   VI+     GR+E
Sbjct: 599 SCGFVGDASTISMVIN-MLHDGRLE 622



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 212/443 (47%), Gaps = 25/443 (5%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           KL +A+ +   M K+   P+++  +  +  +   NK    +   E+MQ  GI  N  TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            L+  +C   ++  A+ ++ +M   G  PD V+  +++   C  KRI             
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI------------- 167

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                      EA  LV+QM +MG  PD VT+  +++G     +  +A  ++ +M   GC
Sbjct: 168 ----------SEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGC 217

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P+  +Y   +NGLC  G    A  ++   E+     N + Y+ ++ GL +   + +A D
Sbjct: 218 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFD 277

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +  +M  KG  P     N LI  LC  G+   A + + + + +    NVV F SLI  F 
Sbjct: 278 LFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFA 337

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           ++G L EA  L D+M     DP+ VTY ++I+    + R++EA ++   M+SK  +P VV
Sbjct: 338 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 397

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKV 608
           TY T+I  +C+  RVE+ ++L  +M  +        YN +I+ L   G  + A KI  K+
Sbjct: 398 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 457

Query: 609 LRTASKADASTCHVLVESYLNKG 631
           +      D  T  +L++     G
Sbjct: 458 VSDGVPPDIITYSILLDGLCKYG 480



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 196/403 (48%), Gaps = 31/403 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           ++Y  +++ L K K    A  +   M  +GI  +P+ F+Y  L+      G+  +A  +L
Sbjct: 257 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGI--KPDVFTYNSLISCLCNYGRWSDASRLL 314

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S M +  + PN++  N+ I       KL +A +  + M    I PN++TYN LI G+C  
Sbjct: 315 SDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 374

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R+ +A ++   M  K C PD V+Y T++   CK KR+                      
Sbjct: 375 DRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRV---------------------- 412

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            EE  EL  +MSQ G + + VTY  ++ G  + G+ D A+K+ ++M   G  P+ ++Y+ 
Sbjct: 413 -EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 471

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L+GLC  GK  +A  +    ++    PN  TY++++ G+ + GK+ +  D+   +  KG
Sbjct: 472 LLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  +    +I   CR+G  + A    +E    G   +   + +LIR   + GD   + 
Sbjct: 532 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASA 591

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            L+ +M  C    D  T + +I+ L  +GR+E++    ++MLS
Sbjct: 592 ELIKEMRSCGFVGDASTISMVINML-HDGRLEKS---YLEMLS 630



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 132/303 (43%), Gaps = 40/303 (13%)

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           E KL +A  +  EMVK   FP+ +E + L+ ++ +  K D      ++  N G   N   
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           ++ L+  FC++  L  AL++L  M     +PD VT +++++      R+ EA  L+ +M+
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMV 178

Query: 542 SKGLVPTVVTYRTVIH--------------------RYCQV---------------GRVE 566
             G  P  VT+ T+IH                    R CQ                G ++
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 238

Query: 567 DLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
             L LL+KM  K K       YN +I+ LC + ++++A  +  K+     K D  T + L
Sbjct: 239 LALSLLKKM-EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSL 297

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +    N G    A ++   M  R + P++     + +    EGK  EA+ L    ++R  
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS- 356

Query: 684 IQP 686
           I P
Sbjct: 357 IDP 359


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 161/660 (24%), Positives = 293/660 (44%), Gaps = 131/660 (19%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYV 198
           P VY ++++ LSK +  +  K+++++M  RG  C P++F++  ++    +AGK+  A  V
Sbjct: 44  PDVYNVLIDSLSKRQETEAVKKMVQVMVDRG--CFPDSFTFTTILCGLCKAGKMDEAELV 101

Query: 199 LSMMQKAAVAPNLLICNTAIH----------------VLVVGNK---------LAKALRF 233
           +  M+   + P     +   H                ++ V N          L KA R 
Sbjct: 102 MDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARV 161

Query: 234 LERMQLA--------------------GIT------------------PNVLTYNCLIKG 255
            + ++LA                    G+                   P ++T N L++G
Sbjct: 162 DDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEG 221

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV------RDLMEKMVN 309
           +C   ++  A +L+  MP + C+PD+VSY TV+  LCK  R++E       R+L     +
Sbjct: 222 FCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSS 281

Query: 310 DSNLFHDQG------------RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
            S+    +G            RI+EA ++  +M++    PD  +Y  +++G  + G+L+ 
Sbjct: 282 SSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLND 341

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A+ + Q++ H G  P+TV+YT+ ++GLC      +ARE+          P+ +TY+V++ 
Sbjct: 342 ARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMID 401

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE-------------------- 457
              + G L EACD++++M++ G  P  V  N ++  LC+                     
Sbjct: 402 ASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTP 461

Query: 458 ------------------------GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
                                   GK+D A + ++   + G   +VV +++LI G C   
Sbjct: 462 NRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 521

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            +++A  LL+DM   +  P  VT  T+I  L K GR++EA E++  M+S G  P VVTY 
Sbjct: 522 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 581

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           T++H +C+ G+ E   +LL  M+++        Y  ++  LC    L EA  +  ++  +
Sbjct: 582 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 641

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
               +  T   L+  + + G      K+   M    + PD  +   ++  L   G+S  A
Sbjct: 642 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 701



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 236/490 (48%), Gaps = 40/490 (8%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+++SY  L+   ++AGKL +A  +   +  + V P+ +   + IH L + N    A   
Sbjct: 321 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 380

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
              M   G  P+ +TYN +I   C    +++A  LI +M   G  PD V+Y TVM  LCK
Sbjct: 381 FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 440

Query: 294 EKRIKEVRDLMEKM----VNDSNLFHD-----------------QGRIEEAKELVNQMSQ 332
             R++E   L  +M       +   H+                 +G+++EA  L+ +M+ 
Sbjct: 441 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTD 500

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G +PDVVTY+ +++G C +  +D A+ +L+ M    CKP  V+    ++GLC  G+  E
Sbjct: 501 DGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKE 560

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           ARE+++       +P+ +TY+ ++HG  R G+   A +++ +MV +G  P  V    L+ 
Sbjct: 561 AREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVS 620

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+  ++  A     +  + GCA N+  +T+LI GFC  G ++  L L  +M      P
Sbjct: 621 GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 680

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMK----MLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
           D V Y T+   L K+GR   A E++ +    + S+     V  YR  +    + G++E  
Sbjct: 681 DHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFAVDGLLEAGKMEMA 738

Query: 569 LKLLEKML------SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA-STCH 621
           L  +  M+      + ++C +    ++  LC  G   EA  +L +++  A    A     
Sbjct: 739 LGFVRDMVRGGQLPAPERCAS----LVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAA 794

Query: 622 VLVESYLNKG 631
             VE  + KG
Sbjct: 795 KFVEEMVGKG 804



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 148/617 (23%), Positives = 253/617 (41%), Gaps = 136/617 (22%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M ++GI   P  F+ ++  +   G+   A+ + S+M++   +P   + N  I  L    +
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQE 59

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP------- 279
                + ++ M   G  P+  T+  ++ G C   ++ +A  ++DEM  +   P       
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 280 ------------------------DKVSYYTVMGYLCKEKRIKEVRDLMEKMVN------ 309
                                   +  +Y  V+  LCK  R+ +  +L   M        
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLA 179

Query: 310 ----DSNL--FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
               DS L    D GRI+EA ++  +  +  C+   VT   ++ GFC  G++D+A+++L+
Sbjct: 180 AGSLDSVLVGLMDSGRIDEALQVYRENRREPCL---VTLNVLLEGFCSRGQVDKARELLR 236

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE---------------------- 401
            M    C P+ VSY   L+GLC  G+  EA  +    E                      
Sbjct: 237 AMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVIL 296

Query: 402 -------------------EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
                              E   +P++ +Y +++ GL + GKL++A ++ ++++  G  P
Sbjct: 297 GLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTP 356

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
           + V    LI  LC     D A++   +   +GC  + V +  +I   C++G LEEA  L+
Sbjct: 357 STVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLI 416

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT---------------------------- 534
             M      PD VTY T++D L K+ RVEEA                             
Sbjct: 417 KKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQ 476

Query: 535 ----------------ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
                            L+ +M   G VP VVTY T+I   C + RV+D   LLE M+ +
Sbjct: 477 SKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 536

Query: 579 QKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
           Q C+      N +I  LC  G ++EA ++L  ++ +    D  T + LV  +   G    
Sbjct: 537 Q-CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTER 595

Query: 636 AYKVACRMFNRNLIPDL 652
           A ++   M  R L P++
Sbjct: 596 ARELLSDMVARGLAPNV 612



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 198/425 (46%), Gaps = 27/425 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L        A+ +   M RRG    P  ++ ++ A  + G L  A  ++  
Sbjct: 359 VAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKK 418

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +    P+++  NT +  L   +++ +AL     M+  G TPN  ++N +I G C   +
Sbjct: 419 MIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSK 478

Query: 262 I---------KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----- 307
           I          +A +L+  M   G  PD V+Y T++  LC   R+ + R L+E M     
Sbjct: 479 IDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 538

Query: 308 ----VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
               V  + L H     GRI+EA+E+++ M   G  PDVVTY  +V+G CR G+ ++A++
Sbjct: 539 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 598

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L  M   G  PN V+YTA ++GLC   +  EA  +    +     PN  TY+ ++ G  
Sbjct: 599 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFC 658

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE----CLNKGCA 476
             G++     +  EMV  G  P  V    L   LC+ G+   A + ++E      ++   
Sbjct: 659 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWG 718

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
             V  F   + G  + G +E AL  + DM    + P      +++  L K+G+  EA  +
Sbjct: 719 DEVYRFA--VDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAV 776

Query: 537 MMKML 541
           + +++
Sbjct: 777 LEEIM 781



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 122/529 (23%), Positives = 226/529 (42%), Gaps = 114/529 (21%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC-SPDKVSYYTVMGYLCKEKRIKE 299
           GI P  L +  +I+G+C++ R  +A+K+   M  + C SP    Y  ++  L K +  + 
Sbjct: 5   GIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLM--EECHSPYPDVYNVLIDSLSKRQETEA 62

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
           V+ +++ MV+                        GC PD  T+T ++ G C+ G++D+A+
Sbjct: 63  VKKMVQVMVD-----------------------RGCFPDSFTFTTILCGLCKAGKMDEAE 99

Query: 360 KMLQQMYHHGCKP-------------------------------NTVSYTAFLNGLCHNG 388
            ++ +M      P                               N+ +Y   +  LC   
Sbjct: 100 LVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAA 159

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  +A E+  T  E+     A +   V+ GL   G++ EA  V RE  ++   P  V +N
Sbjct: 160 RVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLN 216

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD---- 504
           +L++  C  G++D A++ ++   ++ CA + V++ +++ G C+ G +EEA+ L  D    
Sbjct: 217 VLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELP 276

Query: 505 -------------------MYLCKKD------------------PDTVTYTTIIDALSKN 527
                              + LC+ D                  PD+ +Y  +ID L+K 
Sbjct: 277 SSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKA 336

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--- 584
           G++ +A  L  K+L  G+ P+ V Y ++IH  C     +D  +L   M +++ C  +   
Sbjct: 337 GKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM-NRRGCPPSPVT 395

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN +I+  C  G LEEA  ++ K++      D  T + +++          A  +   M 
Sbjct: 396 YNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEME 455

Query: 645 NRNLIPD--------LKLCKKVS-ERLILEGKSEEADTLMLRFVERGHI 684
                P+        L LC++   ++    GK +EA  L+ R  + GH+
Sbjct: 456 RLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHV 504



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 136/335 (40%), Gaps = 60/335 (17%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS--YLMVAYSRAGKLRNAMY 197
           D + Y  ++  L        A+ +L  M +R  +C+P   +   L+    +AG+++ A  
Sbjct: 506 DVVTYSTLISGLCSIARVDDARHLLEDMVKR--QCKPTVVTQNTLIHGLCKAGRIKEARE 563

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL  M  +  +P+++  NT +H      +  +A   L  M   G+ PNV+TY  L+ G C
Sbjct: 564 VLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 623

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
             +R+ +A  +  +M   GC+P+  +Y  ++   C                         
Sbjct: 624 KANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS-----------------------A 660

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G+++   +L  +M   G  PD V Y  +    C+ G   +A ++L+              
Sbjct: 661 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR-------------- 706

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
                         E RE + +   E W      Y   + GL   GK+  A   VR+MV+
Sbjct: 707 --------------EGRESLRS---EAWGDE--VYRFAVDGLLEAGKMEMALGFVRDMVR 747

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
            G  P P     L+  LC+ G+   A+  ++E ++
Sbjct: 748 GGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 782


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/566 (25%), Positives = 265/566 (46%), Gaps = 18/566 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMA-RRGIECRPEAFSYLMV--AYSRAGKLRNAM 196
           D + Y  +L+     K  + A  +L +MA  +G  C P   SY  V   +   G++  A 
Sbjct: 164 DVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAY 223

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   M    + PN++   T I  L     + +A    ++M   G+ P+  TYNCLI GY
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
             + + K+ +++++EM   G  PD  +Y +++ YLC   R +E R   + M+        
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNV 343

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  + +  +G + E  +L+N M + G  PD   +  +   + +   +D+A  +  +
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G  P+ V++ A ++ LC  G+  +A    N    E   PN   ++ +++GL    K
Sbjct: 404 MKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             +A +   EM+ +G  P  V  N ++ +LC +G++  A++ +      G   +V+++T+
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTT 523

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G C  G ++EA   LD M      PD  TY T++    + GR+++A  +  +ML  G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS--KQKCRTAYNQVIENLCSFGYLEEAG 602
           + P VVTY T++H      R  +  +L   M++  KQ     YN ++  L     ++EA 
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAF 643

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           K+   +     + + +T ++++ +    G    A  +   + +  L+PD+     ++E L
Sbjct: 644 KLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENL 703

Query: 663 ILEGKSEEADTLMLRFVERGHIQPKS 688
           I EG  EE D L    +E+    P S
Sbjct: 704 IEEGYLEEFDDL-FSAMEKSGTTPNS 728



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 264/591 (44%), Gaps = 68/591 (11%)

Query: 159 GAKRVLRLMARRGIECRPE---AFSYLMVAYSRAGKLRNAM----YVLSMMQKAA----- 206
           G    L+L        RP    AF++L+ A SR    R++      V+S+  +       
Sbjct: 29  GLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTI 88

Query: 207 -VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            V P+L   +  I       +L         +  +G   N +  N L+KG CD  R+++A
Sbjct: 89  KVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREA 148

Query: 266 IK-LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------- 311
           +  LI  MP  GC+PD VSY T++   C EKR +E  +L+  M +               
Sbjct: 149 MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAT 208

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK---------- 359
             N F  +G++++A  L  +M   G  P+VVTYT V++G C+   +D+A+          
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 360 -------------------------KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
                                    +ML++M  HG KP+  +Y + LN LC+NG+  EAR
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
              ++   +   PN   Y +++HG   +G LSE  D++  MV+ G  P     N++  + 
Sbjct: 329 FFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            ++  +D A     +   +G + +VVNF +LI   C+ G +++A+   + M      P+ 
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC---QVGRVEDLLKL 571
             + +++  L    + E+A E   +ML++G+ P VV + T++   C   QV + + L+ L
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 572 LEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +E++ ++     +Y  +I   C  G ++EA K L  +L    K D  T + L+  Y   G
Sbjct: 509 MERVGTRPDV-ISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
               AY V   M    + P +     +   L    +  EA  L L  +  G
Sbjct: 568 RIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 211/463 (45%), Gaps = 16/463 (3%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D   Y  +L  L     C+ A+     M R+GI+     +  L+  Y+  G L     
Sbjct: 305 KPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHD 364

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L++M +  ++P+  I N           + +A+    +M+  G++P+V+ +  LI   C
Sbjct: 365 LLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALC 424

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSN 312
            L R+ DA+   ++M  +G +P+   + +++  LC   + ++ ++   +M+N     D  
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVV 484

Query: 313 LFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            F+        +G++ +A+ L++ M ++G  PDV++YT ++ G C VG +D+A K L  M
Sbjct: 485 FFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVM 544

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G KP+  +Y   L+G C  G+  +A  +         TP  +TYS ++HGL    + 
Sbjct: 545 LSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRF 604

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
           SEA ++   M+  G        N+++  L +   +D A K  Q   +K   + +  F  +
Sbjct: 605 SEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIM 664

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I    + G  E+A+ L   +      PD  TY  I + L + G +EE  +L   M   G 
Sbjct: 665 IGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGT 724

Query: 546 VPTVVTYRTVIHRYCQVGRVED----LLKLLEKMLSKQKCRTA 584
            P       ++ R    G +      L KL EK  S +   TA
Sbjct: 725 TPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTA 767



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/409 (23%), Positives = 179/409 (43%), Gaps = 12/409 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  ++ ++    +K  +   A  +   M ++G+      F  L+ A  + G++ +A+   
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKF 436

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M    VAPN+ + N+ ++ L   +K  KA  F   M   GI P+V+ +N ++   C  
Sbjct: 437 NQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTK 496

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---------D 310
            ++  A +LID M   G  PD +SY T++G  C   RI E    ++ M++          
Sbjct: 497 GQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTY 556

Query: 311 SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           + L H     GRI++A  +  +M + G  P VVTY+ +++G        +AK++   M  
Sbjct: 557 NTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMIT 616

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G + N   Y   LNGL  N    EA ++  +   + +     T+++++  L + G+  +
Sbjct: 617 SGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNED 676

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +   +   G  P      L+ ++L  EG ++            G   N     +L+R
Sbjct: 677 AMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVR 736

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
               +GD+  A + L  +       +  T   +I  LS++     AT L
Sbjct: 737 RLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 126/309 (40%), Gaps = 16/309 (5%)

Query: 128 FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVA 185
           FY+       R D + +  +L  L        A+R++ LM R G   RP+  SY  L+  
Sbjct: 470 FYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGT--RPDVISYTTLIGG 527

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
           +   G++  A   L +M    + P+    NT +H      ++  A      M   GITP 
Sbjct: 528 HCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPG 587

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           V+TY+ ++ G     R  +A +L   M   G   +   Y  ++  L K   + E   L +
Sbjct: 588 VVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQ 647

Query: 306 KM--------VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
            +        +   N+        GR E+A  L   +S  G +PDV TY  +       G
Sbjct: 648 SLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            L++   +   M   G  PN+    A +  L H G    A   ++  +E+ ++  A T +
Sbjct: 708 YLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTA 767

Query: 414 VVMHGLRRE 422
           +++  L R+
Sbjct: 768 MLISLLSRD 776


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 211/421 (50%), Gaps = 44/421 (10%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GK   A  ++ +M +    P+    +  I  L    K+ KA    + M+  G+ P+V TY
Sbjct: 434 GKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTY 493

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             LI  +C +  I+ A    DEM   GCSP  V+Y  ++    K K++ +  D+  +MV+
Sbjct: 494 TILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVD 553

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM---- 365
                                   GC P+ +TY+A+V+G C+ GE  +A ++  +M    
Sbjct: 554 -----------------------AGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTS 590

Query: 366 -------YHHG-----CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
                  Y  G       PN V+Y A ++GLC   K ++A+E+++        PN I Y 
Sbjct: 591 DNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYD 650

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++ G  + GKL  A +V   M K G+ PT      LI ++ ++ ++D A K + + L  
Sbjct: 651 ALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLES 710

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
            C  NVV +T++I G C+ G+ ++AL LL  M     +P+ VTYT++ID L K+G+V+ +
Sbjct: 711 SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMS 770

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLC 593
            +L  +M+++G  P  VTYR +I+  C  G +++   LL +M  KQ   T + + ++  C
Sbjct: 771 LQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM--KQ---TYWPKYVQGYC 825

Query: 594 S 594
           S
Sbjct: 826 S 826



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 232/484 (47%), Gaps = 35/484 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A ++++LM R+G       +S ++     A K+  A  +   M+   V P++      I 
Sbjct: 439 AFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILID 498

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A  + + M+  G +P+V+TY  L+  Y    ++  A  +   M   GC+P
Sbjct: 499 SFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAP 558

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL----FHDQG----------------- 318
           + ++Y  ++  LCK    ++  ++  KM+  S+     F+ +G                 
Sbjct: 559 NTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALI 618

Query: 319 -------RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                  ++ +A+EL++ MS  GC P+ + Y A+++GFC+VG+LD A+++  +M   G  
Sbjct: 619 DGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYL 678

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P   +YT+ ++ +  + +   A ++++   E   TPN +TY+ ++ GL R G+  +A  +
Sbjct: 679 PTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKL 738

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           +  M K+G  P  V    LI  L + GK+D + +   + + +GCA N V +  LI   C 
Sbjct: 739 LSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCA 798

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G L+EA SLL +M           Y +++   SK  +   +  L+ ++ S G+V     
Sbjct: 799 AGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIAPV 856

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQK-----CRTAYNQVIENLCSFGYLEEAGKILG 606
           Y  +I  + + GR+E  L+L ++M+          +  Y  +I+ LC    LE+A ++  
Sbjct: 857 YGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYS 916

Query: 607 KVLR 610
           ++ R
Sbjct: 917 EITR 920



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 152/665 (22%), Positives = 276/665 (41%), Gaps = 72/665 (10%)

Query: 90  AWSPKLEGELRNLLRS----LKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYY 145
           A++   +G+    LR     L    + AVLRS     + ++FF WA+RQ  Y H    Y 
Sbjct: 82  AYASDFDGKAERFLRRHRDFLNDAVVVAVLRSVRTPELCVRFFLWAERQVGYSHTGACYN 141

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
            + E+L      +  +R+LR +     E      + ++    R G    A+  L  ++  
Sbjct: 142 ALAEVLHFDDRARTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDF 201

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
              P+    N  + VL    ++    R  + M   G   +  T  C  +  C   R  DA
Sbjct: 202 GYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDA 261

Query: 266 IKLID--------------------------------EMPLKGCSPDKVSYYTVMGYLCK 293
           + +I+                                 M    C P+ V+Y T++    K
Sbjct: 262 LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLK 321

Query: 294 EKRIKEVRDLMEKMVND---------SNLFHDQGRIEE---AKELVNQMSQMGCIPDVVT 341
           +K++   + ++  M+N+         ++L H      +   A +L+N+M+  GC P  V 
Sbjct: 322 KKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVV 381

Query: 342 YTAVVNGFCRVGELDQ------AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           Y   +   C   EL        A+K+ ++M    C  N V+   F   LC  GK  +A +
Sbjct: 382 YNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQ 441

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +I     + + P+  TYS V+  L    K+ +A  + +EM   G  P      +LI S C
Sbjct: 442 IIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFC 501

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + G ++ A+ +  E  + GC+ +VV +T+L+  + +   + +A  +   M      P+T+
Sbjct: 502 KVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTI 561

Query: 516 TYTTIIDALSKNGRVEEATELMMKML----------------SKGLVPTVVTYRTVIHRY 559
           TY+ ++D L K G  ++A E+  KM+                +  + P VVTY  +I   
Sbjct: 562 TYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGL 621

Query: 560 CQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C+  +V D  +LL+ M S   +     Y+ +I+  C  G L+ A ++  ++ +       
Sbjct: 622 CKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTV 681

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLR 677
            T   L+++        LA KV  +M   +  P++     + + L   G+ ++A  L+  
Sbjct: 682 HTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSM 741

Query: 678 FVERG 682
             +RG
Sbjct: 742 MEKRG 746



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 140/564 (24%), Positives = 251/564 (44%), Gaps = 49/564 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           ++ D ++   M+  L +  L   A   L  M  R   C P   +Y  L+  + +  +L  
Sbjct: 270 FKLDTVLCTQMISGLMEASLFDEAISFLHRM--RCNSCIPNVVTYRTLLAGFLKKKQLGW 327

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
              ++SMM      PN  + N+ +H          A + L RM   G  P  + YN  I 
Sbjct: 328 CKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIG 387

Query: 255 GYCDLHRIKD------AIKLIDEMPLKGCSPDKVSYYTVMGYLCK----EKRIKEVRDLM 304
             C    +        A K+ +EM    C  +KV+       LC     +K  + ++ +M
Sbjct: 388 SICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMM 447

Query: 305 EK-MVNDSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
            K  V D++ +        +  ++E+A  L  +M  +G IPDV TYT +++ FC+VG ++
Sbjct: 448 RKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIE 507

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           QA+    +M   GC P+ V+YTA L+      +  +A ++ +   +    PN ITYS ++
Sbjct: 508 QARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALV 567

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD--GAKKFMQECLNKG 474
            GL + G+  +AC+V  +M+                     G  D  G+  + +      
Sbjct: 568 DGLCKAGESQKACEVYAKMI---------------------GTSDNVGSDFYFEGEHTDS 606

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
            A NVV + +LI G C+   + +A  LLD M     +P+ + Y  +ID   K G+++ A 
Sbjct: 607 IAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQ 666

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIEN 591
           E+  +M   G +PTV TY ++I    +  R++  +K+L +ML +  C      Y  +I+ 
Sbjct: 667 EVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQML-ESSCTPNVVTYTAMIDG 725

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC  G  ++A K+L  + +     +  T   L++     G   ++ ++  +M  +   P+
Sbjct: 726 LCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPN 785

Query: 652 LKLCKKVSERLILEGKSEEADTLM 675
               + +       G  +EA +L+
Sbjct: 786 YVTYRVLINHCCAAGLLDEAHSLL 809



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 221/471 (46%), Gaps = 41/471 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y ++++   K  L + A+     M   G  C P   +Y  L+ AY +  ++  A  
Sbjct: 489 DVYTYTILIDSFCKVGLIEQARSWFDEMESVG--CSPSVVTYTALLHAYLKTKQVPQASD 546

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM----------------QLAG 241
           +   M  A  APN +  +  +  L    +  KA     +M                    
Sbjct: 547 IFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDS 606

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I PNV+TY  LI G C  H++ DA +L+D M   GC P+ + Y  ++   CK  ++   +
Sbjct: 607 IAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQ 666

Query: 302 DLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
           ++  +M     L             F D+ R++ A ++++QM +  C P+VVTYTA+++G
Sbjct: 667 EVFFRMSKCGYLPTVHTYTSLIDAMFKDR-RLDLAIKVLSQMLESSCTPNVVTYTAMIDG 725

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
            CR+GE  +A K+L  M   GC PN V+YT+ ++GL  +GK   + ++      +   PN
Sbjct: 726 LCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPN 785

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE-INLLIQSLCREGKMDGAKKFM 467
            +TY V+++     G L EA  ++ EM K+ ++P  V+    ++Q   +  K   +   +
Sbjct: 786 YVTYRVLINHCCAAGLLDEAHSLLSEM-KQTYWPKYVQGYCSVVQGFSK--KFIASLGLL 842

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV---TYTTIIDAL 524
           +E  + G       +  LI  F + G LE+AL L  +M       +     TYT++I AL
Sbjct: 843 EELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQAL 902

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
               ++E+A EL  ++  KG+VP +  +  +I    +V +  + L+L   M
Sbjct: 903 CLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSM 953



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/428 (22%), Positives = 177/428 (41%), Gaps = 63/428 (14%)

Query: 121 ERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
           + V   F++  +       + + Y  +++ L K      A+ +L +M+  G E     + 
Sbjct: 591 DNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYD 650

Query: 181 YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
            L+  + + GKL NA  V   M K    P +    + I  +    +L  A++ L +M  +
Sbjct: 651 ALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLES 710

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
             TPNV+TY  +I G C +   + A+KL+  M  +GC+P+ V+Y +++  L K       
Sbjct: 711 SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGK------- 763

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                            G+++ + +L  QM   GC P+ VTY  ++N  C  G LD+A  
Sbjct: 764 ----------------SGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHS 807

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L +M                                   ++ +W      Y  V+ G  
Sbjct: 808 LLSEM-----------------------------------KQTYWPKYVQGYCSVVQGFS 832

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +  K   +  ++ E+   G         LLI S  + G+++ A +  +E +    ++N+ 
Sbjct: 833 K--KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNIT 890

Query: 481 N---FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +   +TSLI+  C    LE+A  L  ++      P+   +  +I  L K  +  EA +L 
Sbjct: 891 SKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLC 950

Query: 538 MKMLSKGL 545
             M  +G+
Sbjct: 951 YSMCDEGV 958


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 246/490 (50%), Gaps = 25/490 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           ++Y +++    + K    A     +M  +G+     A + ++  + ++ +   A  + + 
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  +  +++  N  I+VL    KL KA  F+  M+  GI PNV+TYN +I GYC   R
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           ++ A  + D M  +G  PD  +Y + +  +CKE                       G++E
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKE-----------------------GKLE 278

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA  ++ +M ++G  P  VTY  +++G+C  G L+ A     +M   G  P   +Y   +
Sbjct: 279 EASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLI 338

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           + L  + K  EA  +I    E+   P+++TY+++++G  R G + +A  +  EM+ KG  
Sbjct: 339 HALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQ 398

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           PT V    LI  L + G+M  A    ++ + KG   +++ F +LI G C  G+++ A ++
Sbjct: 399 PTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAM 458

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L +M   K  PD VT+ T++    + G+VE A EL+ +M S+G+ P  ++Y T+I  Y +
Sbjct: 459 LKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSK 518

Query: 562 VGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G ++D  ++ ++MLS     T   YN +I+ LC     + A ++L +++      + +T
Sbjct: 519 RGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNT 578

Query: 620 CHVLVESYLN 629
              L+E   N
Sbjct: 579 YLSLIEGIGN 588



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 237/467 (50%), Gaps = 16/467 (3%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           GI   VL Y+ LI+  C+L R  DA +  D M  KG  P   +   ++    K  R ++ 
Sbjct: 117 GIKTYVL-YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKA 175

Query: 301 RDLMEKM----VNDS--------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             L  +M    +  S        N+   +G++++AKE +  M  +G  P+VVTY  +++G
Sbjct: 176 WVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHG 235

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
           +C  G ++ A+ +   M   G KP++ +Y +F++G+C  GK  EA  M+   +E    P 
Sbjct: 236 YCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPT 295

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
           A+TY+ ++ G   +G L  A D   +MV++G  PT    N+LI +L  + KMD A   ++
Sbjct: 296 AVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIK 355

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E   KG   + V +  LI G+C+ G++++A +L D+M      P  VTYT++I  LSK G
Sbjct: 356 EMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRG 415

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYN 586
           R+++A +L  K++ KG+ P ++ +  +I  +C  G ++    +L++M  +        +N
Sbjct: 416 RMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFN 475

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +++  C  G +E A +++ ++     K D  + + L+  Y  +G    A++V   M + 
Sbjct: 476 TLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSI 535

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQ 693
              P L     + + L    + + A+ L+   + +G I P    +L 
Sbjct: 536 GFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKG-ITPNDNTYLS 581


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 255/538 (47%), Gaps = 17/538 (3%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMAR-RGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMM 202
           ++L+ L      Q A  +L +MA  RG    P+  SY  V   + + G    A      M
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
               ++P+++  ++ I  L  G  + KA+  L  M   G+ PN +TYN ++ GYC   + 
Sbjct: 223 LDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQP 282

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----------- 311
           K+AI  + +M   G  PD V+Y ++M YLCK  R  E R + + M               
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTL 342

Query: 312 -NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
              +  +G + E   L++ M + G  PD   +  ++  + +  ++D+A  +  +M  HG 
Sbjct: 343 LQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PN V+Y A +  LC +G   +A        +E  TPN I Y+ ++H L    K  +A +
Sbjct: 403 NPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEE 462

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           ++ EM+ +G     +  N +I S C+EG++  ++K     +  G   NV+ +++LI G+C
Sbjct: 463 LILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYC 522

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
             G ++EA  LL  M+     PD VTY T+I+   +  R+++A  L  +M+S G+ P ++
Sbjct: 523 LAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNII 582

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
           TY  ++       R     +L   +     Q   + YN ++  LC     +EA ++   +
Sbjct: 583 TYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 642

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
             T  + +  T ++++ + L  G    A  +   +    L+PD++    ++E LI +G
Sbjct: 643 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 700



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 225/476 (47%), Gaps = 21/476 (4%)

Query: 228 AKALRFLERMQLAG---ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           A A+    RM  AG   +TP V TY  LI   C   R+      +  +  KG   + +++
Sbjct: 66  AAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITF 125

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVND----SNLFH---------DQGRIEEAKELVNQMS 331
             ++  LC +KR  +  D++ + + +     ++F          D+ R +EA EL++ M+
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMA 185

Query: 332 Q---MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
                G  PDVV+YT V+NGF + G+ D+A     +M      P+ V+Y++ +  LC   
Sbjct: 186 DDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQ 245

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              +A E++ T  +    PN +TY+ ++HG     +  EA   +++M   G  P  V  N
Sbjct: 246 AMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYN 305

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            L+  LC+ G+   A+K       +G   ++  + +L++G+  KG L E  +LLD M   
Sbjct: 306 SLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRN 365

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD   +  +I A +K  +V+EA  +  KM   GL P VVTY  VI   C+ G V+D 
Sbjct: 366 GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDA 425

Query: 569 LKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           +   E+M+ +        Y  +I +LC F   ++A +++ ++L      +    + ++ S
Sbjct: 426 MLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHS 485

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +  +G  + + K+   M    + P++     + +   L GK +EA  L+      G
Sbjct: 486 HCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/552 (23%), Positives = 242/552 (43%), Gaps = 26/552 (4%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R   D + Y  ++  L K +    A  VL  M + G+      ++ ++  Y  + + + A
Sbjct: 226 RISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEA 285

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           +  L  M+   V P+++  N+ +  L    +  +A +  + M   G+ P++ TY  L++G
Sbjct: 286 IGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQG 345

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           Y     + +   L+D M   G  PD   +  +   +C                     + 
Sbjct: 346 YATKGALVEMHALLDLMVRNGIHPDHHVFNIL---ICA--------------------YA 382

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
            Q +++EA  + ++M Q G  P+VVTY AV+   C+ G +D A    +QM   G  PN +
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            YT+ ++ LC   K  +A E+I    +     N I ++ ++H   +EG++ E+  +   M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           V+ G  P  +  + LI   C  GKMD A K +    + G   + V + +LI G+C+   +
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           ++AL+L  +M      P+ +TY  I+  L    R   A EL + +   G    + TY  +
Sbjct: 563 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNII 622

Query: 556 IHRYCQVGRVEDLLKLLEKM-LSKQKCRT-AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +H  C+    ++ L++ + + L+  +  T  +N +I  L   G  +EA  +   +     
Sbjct: 623 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGL 682

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             D  T  ++ E+ + +G+      +   M       + ++   +  +L+  G    A T
Sbjct: 683 VPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGT 742

Query: 674 LMLRFVERGHIQ 685
             L  ++  H  
Sbjct: 743 Y-LSMIDEKHFS 753



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/487 (23%), Positives = 227/487 (46%), Gaps = 27/487 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K      A+++   M +RG+E     +  L+  Y+  G L     +L
Sbjct: 300 DVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALL 359

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +  + P+  + N  I       K+ +A+    +M+  G+ PNV+TY  +I   C  
Sbjct: 360 DLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKS 419

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             + DA+   ++M  +G +P+ + Y +++  LC                    +F    +
Sbjct: 420 GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC--------------------IFD---K 456

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            ++A+EL+ +M   G   + + + ++++  C+ G + +++K+   M   G KPN ++Y+ 
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G C  GK  EA +++++       P+ +TY+ +++G  R  ++ +A  + +EMV  G
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  +  N+++Q L    +   AK+        G  + +  +  ++ G C+    +EAL
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEAL 636

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +  ++ L     +T T+  +I AL K GR +EA +L   + + GLVP V TY  +    
Sbjct: 637 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 696

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            + G +E+L  L   M  +  C       N ++  L   G +  AG  L  +       +
Sbjct: 697 IEQGLLEELDDLFLSM-EENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFSLE 755

Query: 617 ASTCHVL 623
           AST  +L
Sbjct: 756 ASTASLL 762



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 97/446 (21%), Positives = 178/446 (39%), Gaps = 65/446 (14%)

Query: 104 RSLKP--RQICAVLRSQADERVALQFFYWADRQWR--YRHDPIVYYMMLEILSKTKLCQG 159
           R L+P     C +L+  A +   ++     D   R     D  V+ +++   +K +    
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDE 389

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  V   M + G+      +  ++    ++G + +AM     M    + PN+++  + IH
Sbjct: 390 AMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 449

Query: 220 VLVVGNKLAKA----LRFLER-------------------------------MQLAGITP 244
            L + +K  KA    L  L+R                               M   G+ P
Sbjct: 450 SLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKP 509

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           NV+TY+ LI GYC   ++ +A KL+  M   G  PD V+Y T++   C+  R+ +   L 
Sbjct: 510 NVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALF 569

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           ++MV+                        G  P+++TY  ++ G         AK++   
Sbjct: 570 KEMVSS-----------------------GVSPNIITYNIILQGLFHTRRTAAAKELYVG 606

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           +   G +    +Y   L+GLC N  + EA  M              T+++++  L + G+
Sbjct: 607 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 666

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             EA D+   +   G  P     +L+ ++L  +G ++            GC  N     S
Sbjct: 667 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 726

Query: 485 LIRGFCQKGDLEEA---LSLLDDMYL 507
           ++R   Q+GD+  A   LS++D+ + 
Sbjct: 727 IVRKLLQRGDITRAGTYLSMIDEKHF 752


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/532 (25%), Positives = 258/532 (48%), Gaps = 21/532 (3%)

Query: 95  LEGELRNLLRSLKPRQICAVLRSQADERVALQFFY-WADRQWRYRHDPIVYYMMLEILSK 153
           +E  +  L R +    +  + +   D  +A + F   +  ++ ++H       +L++ ++
Sbjct: 12  IEAAVGRLRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFAR 71

Query: 154 TKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQK-AAVAPNLL 212
           TK  + A  +L+           E ++ L+  Y  A +   A  V+  M++   VAP+L 
Sbjct: 72  TKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLK 131

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
             N  +H L    K+  A+   E     G T ++ TY  ++       +I+DA+ L++++
Sbjct: 132 THNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKI 191

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQG---RI 320
              GC+P   +Y  ++  LCK  R++E  DL+ K+V++         ++L    G   R 
Sbjct: 192 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRS 251

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            EA +L  +M+  G + D V YTA++ G  + G++ QA  + + M   GC P+ V+ +  
Sbjct: 252 FEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 311

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++GLC  G+   A  +  + E     PN + YS ++HGL +  K+  A +++ +M K   
Sbjct: 312 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 371

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  +  N+LI  LC+ G ++ A+ F  E L  GC  +V  +  L+ GFC+ G+ + A  
Sbjct: 372 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACG 431

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           + DDM      P+ VTY T+I  L K  ++ +A+     M  +G  P    Y +++   C
Sbjct: 432 VFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLC 491

Query: 561 QVGRVEDLLKLLEKM----LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
           + G++E    L ++M    ++  + RT   ++I +LC    ++EA  +   +
Sbjct: 492 KSGKLEGGCMLFDEMERSGVANSQTRT---RLIFHLCKANRVDEAVSLFNAI 540



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 34/273 (12%)

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           T + ++    R  +  EA ++++  +   F P     N+LI   C   + + A   ++E 
Sbjct: 61  TGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREM 120

Query: 471 L-NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
             + G A ++     ++ G C+ G +  A+   +         D  TYT I+D L+KN +
Sbjct: 121 EEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKK 180

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVI 589
           +++A  LM K+ + G  PT+ TY                                 N ++
Sbjct: 181 IQDAVALMEKITANGCTPTIATY---------------------------------NALL 207

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
             LC  G LEEA  +L K++      D  T   L++    +     AYK+   M  R L+
Sbjct: 208 NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLV 267

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            D      +   L+  GK  +A ++      +G
Sbjct: 268 LDTVCYTALIRGLLQAGKIPQASSVYKTMTSQG 300


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 243/505 (48%), Gaps = 44/505 (8%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R+ I C   +F+ L+  +    KL  A+     + K  + P+++  NT +H L V ++
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDR 164

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++AL    +M      PNV+T+  L+ G C   RI +A+ L+D M   G  P +++Y T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  +CK+       +L+ KM             EE   +         IP+VV Y+A++
Sbjct: 225 IVDGMCKKGDTVSALNLLRKM-------------EEVSHI---------IPNVVIYSAII 262

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C+ G    A+ +  +M   G  P+  +Y + + G C +G+  +A +++    E   +
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ +TY+ +++   +EGK  EA ++  EM+ +G  P  +  + +I   C++ ++D A+  
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
                 KGC+ N++ F +LI G+C    +++ + LL +M       DT TY T+I     
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN 586
            G +  A +L+ +M+S GL P +VT  T++   C  G+++D L++ + M   +K   A +
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
                                      + D  T ++L+   +N+G  L A ++   M +R
Sbjct: 503 PF----------------------NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 647 NLIPDLKLCKKVSERLILEGKSEEA 671
            ++PD      + + L  + + +EA
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEA 565



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 247/516 (47%), Gaps = 39/516 (7%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L   +     L +A+ + S M ++   P+++     + V+V   +    +   ++M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I  ++ ++  LIK +C   ++  A+    ++   G  PD V++ T++  LC E R+ E  
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                     NLFH             QM +  C P+VVT+T ++NG CR G + +A  +
Sbjct: 170 ----------NLFH-------------QMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE-EWWTPNAITYSVVMHGLR 420
           L +M   G +P  ++Y   ++G+C  G ++ A  ++   EE     PN + YS ++  L 
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           ++G+ S+A ++  EM +KG FP     N +I   C  G+   A++ +QE L +  + +VV
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +LI  F ++G   EA  L D+M      P+T+TY+++ID   K  R++ A  +   M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYL 598
            +KG  P ++T+ T+I  YC   R++D ++LL +M         T YN +I      G L
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGI---PLLAYKV---------ACRMFNR 646
             A  +L +++ +    D  TC  L++   + G     L  +KV         A   FN 
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN- 505

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            + PD++    +   LI EGK  EA+ L      RG
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 224/447 (50%), Gaps = 38/447 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           ++Y  +++ L K      A+ +   M  +GI   P+ F+Y  ++V +  +G+  +A  +L
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI--FPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  ++P+++  N  I+  V   K  +A    + M   GI PN +TY+ +I G+C  
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           +R+  A  +   M  KGCSP+ +++ T++   C  KRI                      
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI---------------------- 411

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            ++  EL+++M++ G + D  TY  +++GF  VG+L+ A  +LQ+M   G  P+ V+   
Sbjct: 412 -DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470

Query: 380 FLNGLCHNGKSLEAREMINTSEEE-----------WWTPNAITYSVVMHGLRREGKLSEA 428
            L+GLC NGK  +A EM    ++               P+  TY++++ GL  EGK  EA
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            ++  EM  +G  P  +  + +I  LC++ ++D A +      +K  + NVV FT+LI G
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +C+ G +++ L L  +M       + +TY T+I    K G +  A ++  +M+S G+ P 
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            +T R ++        ++  + +LEK+
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 216/466 (46%), Gaps = 61/466 (13%)

Query: 174 CRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           CRP    F+ LM    R G++  A+ +L  M +  + P  +   T +  +        AL
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 232 RFLERMQ-LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
             L +M+ ++ I PNV+ Y+ +I   C   R  DA  L  EM  KG  PD  +Y +++  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
            C   R  +   L+++M+               N F  +G+  EA+EL ++M   G IP+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            +TY+++++GFC+   LD A+ M   M   GC PN +++   ++G C   +  +  E+++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE------------ 446
              E     +  TY+ ++HG    G L+ A D+++EM+  G  P  V             
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 447 ----------------------------------INLLIQSLCREGKMDGAKKFMQECLN 472
                                              N+LI  L  EGK   A++  +E  +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +G   + + ++S+I G C++  L+EA  + D M      P+ VT+TT+I+   K GRV++
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
             EL  +M  +G+V   +TY T+I  + +VG +   L + ++M+S 
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 225/463 (48%), Gaps = 24/463 (5%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           L  G+ ++  ++DAI L  +M      P  V +  +MG + + +R   V  L +KM    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                         F    ++  A     +++++G  PDVVT+  +++G C    + +A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            +  QM+   C+PN V++T  +NGLC  G+ +EA  +++   E+   P  ITY  ++ G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 420 RREGKLSEACDVVREMVK-KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
            ++G    A +++R+M +     P  V  + +I SLC++G+   A+    E   KG   +
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +  + S+I GFC  G   +A  LL +M   K  PD VTY  +I+A  K G+  EA EL  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSF 595
           +ML +G++P  +TY ++I  +C+  R+ D  + +  +++ + C      +N +I+  C  
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
             +++  ++L ++  T   AD +T + L+  +   G    A  +   M +  L PD+  C
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVF 698
             + + L   GK ++A       +E   +  KS++ L     F
Sbjct: 469 DTLLDGLCDNGKLKDA-------LEMFKVMQKSKKDLDASHPF 504


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 261/555 (47%), Gaps = 43/555 (7%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           RY   P VY               +K +   + + G+E     F+ L+       KL  A
Sbjct: 22  RYPSKPSVYL--------------SKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEA 67

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + ++  M+  +  P+ +  NT + VL    KL +A   L  M+  G+ PN  T+N L+ G
Sbjct: 68  IGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSG 127

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           YC L  +K+A ++ID M      PD  +Y T++G LCK+                     
Sbjct: 128 YCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKD--------------------- 166

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G+I+EA  L ++M  +  +P VVTY  ++NG        +  +++ +M   G KPN V
Sbjct: 167 --GKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAV 224

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y   +      GK   A   +   EE  ++P+ +T++ + +G  + G+LSEA  ++ EM
Sbjct: 225 TYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEM 284

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            +KG     V +N ++ +LC E K+D A K +     +G  V+ V++ +LI G+ + G  
Sbjct: 285 SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVG-- 342

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
                  D+M   +  P  +TY T+I  L ++G+ +++ +   ++L  GLVP   TY T+
Sbjct: 343 --KSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTI 400

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I  YC+ G+V+       KM+ K      +  N ++  LC+ G L++A K+    +    
Sbjct: 401 ILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGK 460

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             DA T + ++     +G    A+ +   M  + L PD      +   L   G+ +EA+ 
Sbjct: 461 AIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEE 520

Query: 674 LMLRFVERGHIQPKS 688
            M   VE+G +Q ++
Sbjct: 521 FMSGIVEQGKLQDQT 535



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 239/523 (45%), Gaps = 72/523 (13%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +L++L K      A+ +L  M   G+      F+ L+  Y + G L+ A  V+
Sbjct: 82  DNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVI 141

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +  V P++    T I  L    K+ +A R  + M+   + P+V+TYN LI G  + 
Sbjct: 142 DIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFEC 201

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND--------- 310
                  +LIDEM  KG  P+ V+Y  V+ +  KE ++    + + KM            
Sbjct: 202 SSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTF 261

Query: 311 ---SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
              SN +   GR+ EA  ++++MS+ G   + VT   +++  C   +LD A K+L     
Sbjct: 262 NTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASK 321

Query: 368 HG-------------------------------CKPNTVSYTAFLNGLCHNGKSLEAREM 396
            G                                 P+ ++Y   + GLC +GK+ ++ + 
Sbjct: 322 RGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDK 381

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
            N   E    P+  TY+ ++ G  REG++ +A     +MVKK F P     N+L++ LC 
Sbjct: 382 CNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCT 441

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           EG +D A K  +  ++KG A++ V F ++I G C++G  EEA  LL +M   K  PD  T
Sbjct: 442 EGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYT 501

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLV-----------------------PTVVTYR 553
           +  I+ AL+  GR++EA E M  ++ +G +                       P  V + 
Sbjct: 502 HNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFS 561

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKC----RTAYNQVIENL 592
             I+  C  G+ +D + ++++  S QK     ++ Y  ++E L
Sbjct: 562 EQINELCTQGKYKDAMHMIQE--STQKGIILHKSTYISLMEGL 602



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 239/486 (49%), Gaps = 32/486 (6%)

Query: 202 MQKAAVAPNLLICNTAIHVLV-----VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           M++  + PNLL  NT I  LV         L+KA+ F + ++L G+  N  T+N LI G 
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAI-FSDVIKL-GVEVNTNTFNILICGC 58

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C  +++ +AI LI +M    C PD VSY T++  LCK+ ++ E RDL+  M N+      
Sbjct: 59  CIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNN------ 112

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
                            G  P+  T+  +V+G+C++G L +A +++  M  +   P+  +
Sbjct: 113 -----------------GLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRT 155

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YT  + GLC +GK  EA  + +  E     P+ +TY+++++G        +  +++ EM 
Sbjct: 156 YTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEME 215

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            KG  P  V  N++++   +EGKMD A   +++    G + + V F +L  G+C+ G L 
Sbjct: 216 GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLS 275

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           EA  ++D+M       ++VT  TI+  L    ++++A +L+     +G     V+Y T+I
Sbjct: 276 EAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLI 335

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
             Y +VG+     ++ EK +        Y  +I  LC  G  +++     ++L +    D
Sbjct: 336 MGYFKVGKSXXWDEMKEKEIIPS--IITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPD 393

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
            +T + ++  Y  +G    A+    +M  ++  PDL  C  +   L  EG  ++A  L  
Sbjct: 394 QTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFK 453

Query: 677 RFVERG 682
            ++ +G
Sbjct: 454 TWISKG 459


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 213/406 (52%), Gaps = 25/406 (6%)

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           KL KA  F+  M+  G  PNV++YN +I GY     I+ A +++D M +KG  PD  +Y 
Sbjct: 188 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYG 247

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
           +++  +CKE                       GR+EEA  L ++M ++G +P+ VTY  +
Sbjct: 248 SLISGMCKE-----------------------GRLEEASGLFDKMVEIGLVPNAVTYNTL 284

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G+C  G+L++A     +M   G  P+  +Y   ++ L   G+  EA +MI    ++  
Sbjct: 285 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 344

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+AITY+++++G  R G    A D+  EM+ KG  PT V    LI  L R  +M  A  
Sbjct: 345 IPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADD 404

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             ++ L++G + +V+ F ++I G C  G++E A  LL +M      PD VT+ T++    
Sbjct: 405 LFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 464

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-- 583
           + G+VEEA  L+ +M  +G+ P  ++Y T+I  Y + G ++D   + ++MLS     T  
Sbjct: 465 REGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLL 524

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
            YN +I+ LC     + A ++L +++      D ST   L+E   N
Sbjct: 525 TYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGN 570



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 200/402 (49%), Gaps = 28/402 (6%)

Query: 171 GIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
           G+  +P   SY  ++  YS  G +  A  +L  M+   + P+     + I  +    +L 
Sbjct: 201 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 260

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           +A    ++M   G+ PN +TYN LI GYC+   ++ A    DEM  KG  P   +Y  ++
Sbjct: 261 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 320

Query: 289 GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             L  E                       GR+ EA +++ +M + G IPD +TY  ++NG
Sbjct: 321 HALFME-----------------------GRMGEADDMIKEMRKKGIIPDAITYNILING 357

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
           + R G   +A  +  +M   G +P  V+YT+ +  L    +  EA ++     ++  +P+
Sbjct: 358 YSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 417

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
            I ++ ++ G    G +  A  +++EM +K   P  V  N L+Q  CREGK++ A+  + 
Sbjct: 418 VIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLD 477

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E   +G   + +++ +LI G+ ++GD+++A  + D+M     +P  +TY  +I  L KN 
Sbjct: 478 EMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQ 537

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
             + A EL+ +M++KG+ P   TY ++I     +G V+ L++
Sbjct: 538 EGDLAEELLKEMVNKGISPDDSTYLSLIE---GMGNVDTLVE 576



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 183/366 (50%), Gaps = 16/366 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           ++ + + Y  ++   S     +GA+R+L  M  +GIE  P++++Y  L+    + G+L  
Sbjct: 204 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE--PDSYTYGSLISGMCKEGRLEE 261

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +   M +  + PN +  NT I        L +A  + + M   GI P+V TYN L+ 
Sbjct: 262 ASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 321

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
                 R+ +A  +I EM  KG  PD ++Y  ++    +    K   DL  +M++     
Sbjct: 322 ALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEP 381

Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                     +   + R++EA +L  ++   G  PDV+ + A+++G C  G +++A  +L
Sbjct: 382 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLL 441

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           ++M      P+ V++   + G C  GK  EAR +++  +     P+ I+Y+ ++ G  R 
Sbjct: 442 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRR 501

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G + +A  V  EM+  GF PT +  N LI+ LC+  + D A++ ++E +NKG + +   +
Sbjct: 502 GDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 561

Query: 483 TSLIRG 488
            SLI G
Sbjct: 562 LSLIEG 567



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 143/301 (47%), Gaps = 3/301 (0%)

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           GK  +ARE I   E   + PN ++Y+ ++HG    G +  A  ++  M  KG  P     
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             LI  +C+EG+++ A     + +  G   N V + +LI G+C KGDLE A S  D+M  
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P   TY  ++ AL   GR+ EA +++ +M  KG++P  +TY  +I+ Y + G  + 
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 568 LLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
              L  +MLSK  +     Y  +I  L     ++EA  +  K+L      D    + +++
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ 685
            +   G    A+ +   M  +++ PD      + +    EGK EEA  L+     RG I+
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG-IK 485

Query: 686 P 686
           P
Sbjct: 486 P 486



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 5/186 (2%)

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L D++ L  +D  +V  + + D L   G++++A E +  M   G  P VV+Y T+IH Y 
Sbjct: 163 LFDELTL-SRDRLSVKSSIVFDLLE--GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 219

Query: 561 QVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
             G +E   ++L+ M  K  +     Y  +I  +C  G LEEA  +  K++      +A 
Sbjct: 220 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 279

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           T + L++ Y NKG    A+     M  + ++P +     +   L +EG+  EAD ++   
Sbjct: 280 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 339

Query: 679 VERGHI 684
            ++G I
Sbjct: 340 RKKGII 345


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 249/505 (49%), Gaps = 47/505 (9%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G+L  A+ ++   ++    P+   C   I  L    + A+A R L     A   P+V+
Sbjct: 77  RRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVL-----AACGPDVM 127

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            YN ++ GYC   ++  A +L+ EMP++   PD  +Y T++  LC               
Sbjct: 128 AYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLC--------------- 169

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +GR   A  ++++M +  C+PDVVTYT ++   C+     QA K+L +M  
Sbjct: 170 --------GRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 221

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+ V+Y   +NG+C  G+  +A E +         PN ++Y++V+ GL    +  +
Sbjct: 222 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 281

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A +++ EM +KG  P  V  N+LI  LCR+G ++ A + +++    GC  N +++  L+ 
Sbjct: 282 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLH 341

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            FC++  +++A++ LD M      PD V+Y T++ AL ++G V+ A EL+ ++  KG  P
Sbjct: 342 AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP 401

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            +++Y TVI    + G+ ++ L+LL +M+SK  Q     Y+ +   LC    +E+A +  
Sbjct: 402 VLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF 461

Query: 606 GKVLRTASKADASTCHVLVESYLNK-----GIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           GKV     + +    + ++     +      I L AY     M     +P+      + E
Sbjct: 462 GKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY-----MIGNGCMPNESTYTILIE 516

Query: 661 RLILEGKSEEADTLMLRFVERGHIQ 685
            L  EG  +EA  L+     RG ++
Sbjct: 517 GLAYEGLIKEARDLLDELCSRGVVR 541



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 210/396 (53%), Gaps = 16/396 (4%)

Query: 165 RLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           RL+A   +E  P+A++Y  L+      G+  NA+ VL  M +    P+++     +    
Sbjct: 147 RLVAEMPVE--PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATC 204

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
             +   +A++ L+ M+  G TP+++TYN ++ G C   R+ DAI+ +  +P  GC P+ V
Sbjct: 205 KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 264

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQM 330
           SY  V+  LC  +R ++  +LM +M                +    +G +E A E++ Q+
Sbjct: 265 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 324

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            + GC P+ ++Y  +++ FC+  ++D+A   L  M   GC P+ VSY   L  LC +G+ 
Sbjct: 325 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 384

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             A E+++  +++   P  I+Y+ V+ GL + GK  EA +++ EMV KG  P  +  + +
Sbjct: 385 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 444

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
              LCRE +++ A +   +  + G   N V + ++I G C++ +   A+ L   M     
Sbjct: 445 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 504

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            P+  TYT +I+ L+  G ++EA +L+ ++ S+G+V
Sbjct: 505 MPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 146/300 (48%), Gaps = 23/300 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y ++L+ L   +  + A+ ++  M ++G       F+ L+    R G +  A+ VL
Sbjct: 262 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 321

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + K    PN L  N  +H      K+ KA+ FL+ M   G  P++++YN L+   C  
Sbjct: 322 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 381

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             +  A++L+ ++  KGC+P  +SY TV+  L K                        G+
Sbjct: 382 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK-----------------------AGK 418

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            +EA EL+N+M   G  PD++TY+ +  G CR   ++ A +   ++   G +PNTV Y A
Sbjct: 419 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 478

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            + GLC   ++  A ++          PN  TY++++ GL  EG + EA D++ E+  +G
Sbjct: 479 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 538


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/552 (26%), Positives = 255/552 (46%), Gaps = 25/552 (4%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           + + +   YY ++  L K    + A+ +   M   GI+   + ++ L+  Y +   +  A
Sbjct: 367 KIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKA 426

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +L  ++K  +  N  +C   ++ L     L +A    + M   G+ PN++ Y  ++KG
Sbjct: 427 YELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKG 486

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
                R ++AIK++  M  +G SPD   Y TV+   CK                      
Sbjct: 487 LVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCK---------------------- 524

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G++EE K  + +M   G  P+V TY A ++G+CR GE+  A++   +M   G  PN V
Sbjct: 525 -AGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDV 583

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
             T  ++G C +G + +A        ++   P+  T+SV++HGL + GKL EA  V  E+
Sbjct: 584 ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSEL 643

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           + KG  P       LI +LC+EG +  A +   +   KG   N+V + +LI G C+ G++
Sbjct: 644 LDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEI 703

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            +A  L D +       ++VTY+TII    K+  + EA +L   M   G+ P    Y  +
Sbjct: 704 AKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCAL 763

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRT-AYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           I   C+ G  E  L L   M+ +    T A+N +I+     G L EA +++  ++     
Sbjct: 764 IDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHIT 823

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            +  T  +L+E +   G    A ++   M  RN++P++     +       G+  E  +L
Sbjct: 824 PNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSL 883

Query: 675 MLRFVERGHIQP 686
               V RG I+P
Sbjct: 884 FDEMVARG-IKP 894



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 165/633 (26%), Positives = 280/633 (44%), Gaps = 58/633 (9%)

Query: 78  VREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA--DERVALQFFYWADRQW 135
           V+E+  L++ ++ W   +E     L   L P  +  V++     D +    FF W + + 
Sbjct: 45  VKEITSLLKQKN-WQFLIESS--PLPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWVNSRT 101

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVL-RLMARRG---------IECRPE-------- 177
            +  +   + ++  IL  + L   A  VL R++  R          I+C  E        
Sbjct: 102 VFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGSSSSS 161

Query: 178 ---AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
               F  L+  Y + G L  A+ V    +       L  CN+    L+ GN++    +  
Sbjct: 162 SVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVY 221

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
           + M L  I P+V TY  LI  YC + ++++   ++ +M  KGC P+ V+Y  V+  LC+ 
Sbjct: 222 KGM-LGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCR- 279

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
                                  G ++EA EL   M+  G +PD   Y  +++GFCR   
Sbjct: 280 ----------------------AGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKR 317

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN---GKSLEAREMINTSEEEWWTPNAIT 411
             + K ML +MY  G KP+ V+YTA +NG       G + + +E +   + +    N  T
Sbjct: 318 STEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKL---NTFT 374

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y  ++HGL + G L +A D+  EM   G  P     N LI+   +   M+ A + + E  
Sbjct: 375 YYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIK 434

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            +    N     +++ G C  GDL  A  L  +M      P+ V YTTI+  L K GR E
Sbjct: 435 KENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFE 494

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVI 589
           EA +++  M  +GL P V  Y TVI  +C+ G++E+    L +M++K  +     Y   I
Sbjct: 495 EAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFI 554

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
              C  G ++ A +   ++L +    +   C  L++ Y   G    A+     M ++ ++
Sbjct: 555 HGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVL 614

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           PD++    +   L   GK +EA  +    +++G
Sbjct: 615 PDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 151/560 (26%), Positives = 258/560 (46%), Gaps = 23/560 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  +Y  +++   + K     K +L  M   G++    A++ L+  + +   +  A  V 
Sbjct: 301 DNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVK 360

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    +  N       IH L     L KA      M + GI P++ TYNCLI+GY  +
Sbjct: 361 EEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKV 420

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNL--- 313
             ++ A +L+ E+  +  + +      ++  LC    +    +L ++M++     N+   
Sbjct: 421 QNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIY 480

Query: 314 ------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +GR EEA +++  M   G  PDV  Y  V+ GFC+ G++++ K  L +M  
Sbjct: 481 TTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIA 540

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G KPN  +Y AF++G C  G+   A        +    PN +  + ++ G  ++G  ++
Sbjct: 541 KGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTK 600

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A    R M+ +G  P     ++LI  L + GK+  A     E L+KG   +V  +TSLI 
Sbjct: 601 AFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLIS 660

Query: 488 GFCQKGDLEEALSLLDDMYLCKK--DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
             C++GDL+ A  L DDM  CKK  +P+ VTY  +I+ L K G + +A EL   +  KGL
Sbjct: 661 NLCKEGDLKAAFELHDDM--CKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGL 718

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLE--KMLSKQKCRTAYNQVIENLCSFGYLEEAGK 603
               VTY T+I  YC+   + +  +L    K++        Y  +I+  C  G  E+A  
Sbjct: 719 ARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKA-- 776

Query: 604 ILGKVLRTASKADAST--CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
            L   L    +  AST   + L++ +   G  + AY++   M + ++ P+      + E 
Sbjct: 777 -LSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEY 835

Query: 662 LILEGKSEEADTLMLRFVER 681
               G  +EA+ L +   +R
Sbjct: 836 HCTVGNIKEAEQLFMEMQKR 855



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 253/562 (45%), Gaps = 59/562 (10%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+ ++Y  L+ AY R GK+    +VL  M++    PNL+  +  I  L     + +AL  
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV----------- 282
              M   G+ P+   Y  LI G+C   R  +   ++DEM   G  PD V           
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349

Query: 283 ------------------------SYYTVMGYLCKEKRIKEVRDLMEKM--------VND 310
                                   +YY ++  LCK   +++  DL  +M        +  
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 311 SNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            N     ++    +E+A EL+ ++ +     +     A+VNG C  G+L +A ++ Q+M 
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G KPN V YT  + GL   G+  EA +++   +++  +P+   Y+ V+ G  + GK+ 
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           E    + EM+ KG  P        I   CR G+M  A++   E L+ G A N V  T LI
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLI 589

Query: 487 RGFCQKGDLEEALS----LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            G+C+ G+  +A +    +LD   L    PD  T++ +I  LSKNG+++EA  +  ++L 
Sbjct: 590 DGYCKDGNTTKAFAKFRCMLDQGVL----PDVQTHSVLIHGLSKNGKLQEAMGVFSELLD 645

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
           KGLVP V TY ++I   C+ G ++   +L + M  K        YN +I  LC  G + +
Sbjct: 646 KGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAK 705

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           A ++   +       ++ T   ++  Y        A+++   M    + PD  +   + +
Sbjct: 706 ARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALID 765

Query: 661 RLILEGKSEEADTLMLRFVERG 682
                G +E+A +L L  VE G
Sbjct: 766 GCCKAGNTEKALSLFLGMVEEG 787



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 239/530 (45%), Gaps = 65/530 (12%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGK 191
            W  + + ++Y  +++ L K    + A ++L +M  +G+   P+ F Y  +++ + +AGK
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLS--PDVFCYNTVIIGFCKAGK 527

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +      L  M    + PN+      IH      ++  A R    M  +GI PN +    
Sbjct: 528 MEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTD 587

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI GYC       A      M  +G  PD  ++  ++  L K                  
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSK------------------ 629

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 G+++EA  + +++   G +PDV TYT++++  C+ G+L  A ++   M   G  
Sbjct: 630 -----NGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGIN 684

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN V+Y A +NGLC  G+  +ARE+ +   E+    N++TYS ++ G  +   L+EA  +
Sbjct: 685 PNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQL 744

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
              M   G  P       LI   C+ G  + A       + +G A +   F +LI GF +
Sbjct: 745 FHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA-STPAFNALIDGFFK 803

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G L EA  L++DM      P+ VTYT +I+     G ++EA +L M+M  + ++P V+T
Sbjct: 804 LGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLT 863

Query: 552 YRTVIHRYCQVGRVEDL-----------------------------------LKLLEKML 576
           Y +++H Y ++GR  ++                                   LKL++ ML
Sbjct: 864 YTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDML 923

Query: 577 SK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           S+    C+  Y  +I+ LC    L E  K+L +V +  SK   +TC  LV
Sbjct: 924 SEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLV 973



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 227/469 (48%), Gaps = 21/469 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
            K  L  M  +G+  +P  ++Y   +  Y RAG+++ A      M  + +APN +IC   
Sbjct: 531 GKSYLVEMIAKGL--KPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDL 588

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I          KA      M   G+ P+V T++ LI G     ++++A+ +  E+  KG 
Sbjct: 589 IDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGL 648

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFHDQ--------GRIEEAKE 325
            PD  +Y +++  LCKE  +K   +L + M    +N + + ++         G I +A+E
Sbjct: 649 VPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARE 708

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L + + + G   + VTY+ ++ G+C+   L +A ++   M   G  P++  Y A ++G C
Sbjct: 709 LFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCC 768

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G + +A  +     EE    +   ++ ++ G  + GKL EA  +V +MV     P  V
Sbjct: 769 KAGNTEKALSLFLGMVEEG-IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHV 827

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
              +LI+  C  G +  A++   E   +    NV+ +TSL+ G+ + G   E  SL D+M
Sbjct: 828 TYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEM 887

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 PD + ++ ++DA  K G   +A +L+  MLS+G+      Y  +I   C+   +
Sbjct: 888 VARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNL 947

Query: 566 EDLLKLLEKMLSKQKCRTAYNQVIENLCSF---GYLEEAGKILGKVLRT 611
            ++LK+L++ + KQ  + +       +C F   G  +EA ++L  ++R+
Sbjct: 948 SEVLKVLDE-VEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRS 995


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 243/505 (48%), Gaps = 44/505 (8%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R+ I C   +F+ L+  +    KL  A+     + K  + P+++  NT +H L V ++
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDR 164

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++AL    +M      PNV+T+  L+ G C   RI +A+ L+D M   G  P +++Y T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  +CK+       +L+ KM             EE   +         IP+VV Y+A++
Sbjct: 225 IVDGMCKKGDTVSALNLLRKM-------------EEVSHI---------IPNVVIYSAII 262

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C+ G    A+ +  +M   G  P+  +Y + + G C +G+  +A +++    E   +
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ +TY+ +++   +EGK  EA ++  EM+ +G  P  +  + +I   C++ ++D A+  
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
                 KGC+ N++ F +LI G+C    +++ + LL +M       DT TY T+I     
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN 586
            G +  A +L+ +M+S GL P +VT  T++   C  G+++D L++ + M   +K   A +
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
                                      + D  T ++L+   +N+G  L A ++   M +R
Sbjct: 503 PF----------------------NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 647 NLIPDLKLCKKVSERLILEGKSEEA 671
            ++PD      + + L  + + +EA
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEA 565



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 247/516 (47%), Gaps = 39/516 (7%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L   +     L +A+ + S M ++   P+++     + V+V   +    +   ++M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I  ++ ++  LIK +C   ++  A+    ++   G  PD V++ T++  LC E R+ E  
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                     NLFH             QM +  C P+VVT+T ++NG CR G + +A  +
Sbjct: 170 ----------NLFH-------------QMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE-EWWTPNAITYSVVMHGLR 420
           L +M   G +P  ++Y   ++G+C  G ++ A  ++   EE     PN + YS ++  L 
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           ++G+ S+A ++  EM +KG FP     N +I   C  G+   A++ +QE L +  + +VV
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +LI  F ++G   EA  L D+M      P+T+TY+++ID   K  R++ A  +   M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYL 598
            +KG  P ++T+ T+I  YC   R++D ++LL +M         T YN +I      G L
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGI---PLLAYKV---------ACRMFNR 646
             A  +L +++ +    D  TC  L++   + G     L  +KV         A   FN 
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN- 505

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            + PD++    +   LI EGK  EA+ L      RG
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 224/447 (50%), Gaps = 38/447 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           ++Y  +++ L K      A+ +   M  +GI   P+ F+Y  ++V +  +G+  +A  +L
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI--FPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  ++P+++  N  I+  V   K  +A    + M   GI PN +TY+ +I G+C  
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           +R+  A  +   M  KGCSP+ +++ T++   C  KRI                      
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI---------------------- 411

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            ++  EL+++M++ G + D  TY  +++GF  VG+L+ A  +LQ+M   G  P+ V+   
Sbjct: 412 -DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470

Query: 380 FLNGLCHNGKSLEAREMINTSEEE-----------WWTPNAITYSVVMHGLRREGKLSEA 428
            L+GLC NGK  +A EM    ++               P+  TY++++ GL  EGK  EA
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            ++  EM  +G  P  +  + +I  LC++ ++D A +      +K  + NVV FT+LI G
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +C+ G +++ L L  +M       + +TY T+I    K G +  A ++  +M+S G+ P 
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            +T R ++        ++  + +LEK+
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 216/466 (46%), Gaps = 61/466 (13%)

Query: 174 CRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           CRP    F+ LM    R G++  A+ +L  M +  + P  +   T +  +        AL
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 232 RFLERMQ-LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
             L +M+ ++ I PNV+ Y+ +I   C   R  DA  L  EM  KG  PD  +Y +++  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
            C   R  +   L+++M+               N F  +G+  EA+EL ++M   G IP+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            +TY+++++GFC+   LD A+ M   M   GC PN +++   ++G C   +  +  E+++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE------------ 446
              E     +  TY+ ++HG    G L+ A D+++EM+  G  P  V             
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 447 ----------------------------------INLLIQSLCREGKMDGAKKFMQECLN 472
                                              N+LI  L  EGK   A++  +E  +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +G   + + ++S+I G C++  L+EA  + D M      P+ VT+TT+I+   K GRV++
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
             EL  +M  +G+V   +TY T+I  + +VG +   L + ++M+S 
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 225/463 (48%), Gaps = 24/463 (5%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           L  G+ ++  ++DAI L  +M      P  V +  +MG + + +R   V  L +KM    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                         F    ++  A     +++++G  PDVVT+  +++G C    + +A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            +  QM+   C+PN V++T  +NGLC  G+ +EA  +++   E+   P  ITY  ++ G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 420 RREGKLSEACDVVREMVK-KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
            ++G    A +++R+M +     P  V  + +I SLC++G+   A+    E   KG   +
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +  + S+I GFC  G   +A  LL +M   K  PD VTY  +I+A  K G+  EA EL  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSF 595
           +ML +G++P  +TY ++I  +C+  R+ D  + +  +++ + C      +N +I+  C  
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
             +++  ++L ++  T   AD +T + L+  +   G    A  +   M +  L PD+  C
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVF 698
             + + L   GK ++A       +E   +  KS++ L     F
Sbjct: 469 DTLLDGLCDNGKLKDA-------LEMFKVMQKSKKDLDASHPF 504


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 156/600 (26%), Positives = 273/600 (45%), Gaps = 69/600 (11%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMAR-RGIECRPEAFSYLMV--AYSRAGKLRNAMYVLS 200
           Y ++L+ L      Q A  +L +MA  RG    P+  SY  V   + + G    A     
Sbjct: 161 YNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYH 220

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M    + P+++  N+ I  L     + KA+  L  M   G+ P+ +TYN ++ GYC   
Sbjct: 221 EMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 280

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
           + K+AI  + +M   G  PD V+Y  +M YLCK                        GR 
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK-----------------------NGRC 317

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            EA+++ + M++ G  P++ TY  ++ G+   G L +   +L  M  +G  P+   ++  
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           +    + GK  +A  + +   ++   PNA+TY  V+  L + G++ +A     +M+ +G 
Sbjct: 378 ICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  +  N LI  LC   K + A++ + E L++G  +N + F S+I   C++G + E+  
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L + M      P+ +TY T+I+     G+++EA +L+  M+S GL P  VTY T+I+ YC
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557

Query: 561 QVGRVEDLLKLLEKMLSK-----------------QKCRTA------------------- 584
           ++ R+ED L L ++M S                  Q  RTA                   
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617

Query: 585 -YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            YN ++  LC     ++A ++   +     K +A T ++++++ L  G    A  +    
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF------VERGHIQPKSEEHLQRQRV 697
            +  L+P+    + ++E +I +G  EE D L L        V+ G +     E LQR  +
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 252/538 (46%), Gaps = 23/538 (4%)

Query: 167 MARRGI-ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           MAR G  E  P+  +Y  L+    RAG+L      L  + K     + +     +  L  
Sbjct: 75  MARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 134

Query: 224 GNKLAKALRF-LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP---LKGCSP 279
             + + A+   L RM   G  PNV +YN L+KG CD +R ++A++L+  M      G  P
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKEL 326
           D VSY TV+    KE    +      +M+ D  +  D                +++A E+
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEML-DRGILPDVVTYNSIIAALCKAQAMDKAMEV 253

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           +N M + G +PD +TY ++++G+C  G+  +A   L++M   G +P+ V+Y+  ++ LC 
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
           NG+ +EAR++ ++  +    P   TY  ++ G   +G L E   ++  MV+ G  P    
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            ++LI +   +GK+D A     +   +G   N V + ++I   C+ G +E+A+   + M 
Sbjct: 374 FSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                P  + Y ++I  L    + E A EL+++ML +G+    + + ++I  +C+ GRV 
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493

Query: 567 DLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           +  KL E M  +  +     YN +I   C  G ++EA K+L  ++    K +  T   L+
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             Y        A  +   M +  + PD+     + + L    ++  A  L +R  E G
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 225/489 (46%), Gaps = 27/489 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++++ L K   C  A+++   M +RG++     +  L+  Y+  G L     +L
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +  + P+  + +  I       K+ +A+    +M+  G+ PN +TY  +I   C  
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R++DA+   ++M  +G SP  + Y +++  LC   +                       
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW---------------------- 457

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            E A+EL+ +M   G   + + + ++++  C+ G + +++K+ + M   G KPN ++Y  
Sbjct: 458 -ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +NG C  GK  EA ++++        PN +TYS +++G  +  ++ +A  + +EM   G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  +  N+++Q L +  +   AK+        G  + +  +  ++ G C+    ++AL
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +  ++ L     +  T+  +IDAL K GR +EA +L +   S GLVP   TYR +    
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 696

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
              G +E+L +L   M     C       N ++  L   G +  AG  L  +       +
Sbjct: 697 IGQGLLEELDQLFLSM-EDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 755

Query: 617 ASTCHVLVE 625
           AST  + ++
Sbjct: 756 ASTASLFID 764



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 176/443 (39%), Gaps = 100/443 (22%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNL----------- 211
           +L LM R GI      FS L+ AY+  GK+  AM V S M++  + PN            
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417

Query: 212 ------------------------LICNTAIHVLVVGNKLAKA----LRFLER------- 236
                                   ++ N+ IH L   NK  +A    L  L+R       
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477

Query: 237 ------------------------MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
                                   M   G+ PNV+TYN LI GYC   ++ +A+KL+  M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQ 332
              G  P+ V+Y T++   CK                         R+E+A  L  +M  
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKIS-----------------------RMEDALVLFKEMES 574

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G  PD++TY  ++ G  +      AK++  ++   G +    +Y   L+GLC N  + +
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A +M            A T+++++  L + G+  EA D+       G  P      L+ +
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA---LSLLDDMYLCK 509
           ++  +G ++   +      + GC V+      ++R   Q+G++  A   LS++D+ +   
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF-- 752

Query: 510 KDPDTVTYTTIIDALSKNGRVEE 532
              +  T +  ID LS  G+ +E
Sbjct: 753 -SLEASTASLFIDLLS-GGKYQE 773


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 156/585 (26%), Positives = 289/585 (49%), Gaps = 34/585 (5%)

Query: 123 VALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR-LMARRGIECRPEAFSY 181
           + L FF WA  + R  H+       L++L +    Q A  + R  MAR    C P  F+Y
Sbjct: 6   LVLLFFDWA--RSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARI---CMPNKFTY 60

Query: 182 --LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
             L+  +S AG L  A+ +L  M+ +    N ++  T +  L    ++ +AL     M  
Sbjct: 61  GILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA- 119

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK----EK 295
               P+V+TY  L+   C   +  +A  ++ EM  +GC+PD V++ T++  LCK    E+
Sbjct: 120 KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQ 179

Query: 296 RIKEVRDLMEKMVNDSN---------LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
             + + D++++ + +S+         L +    +E A +++  +   G  P V+ +  V+
Sbjct: 180 AFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVI 239

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           NGFC+  +LD A K+L+ M   GC PN  ++T  + GLC   +  EA++++        +
Sbjct: 240 NGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCS 299

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN +TYS V++GL ++G++ +A ++ + M ++   P  V  N+LI  LC+  +++ A++ 
Sbjct: 300 PNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQL 359

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK-KDPDTVTYTTIIDALS 525
                  GCA +++ + SLI G C+   ++EA  L   +        + VTY+T+    +
Sbjct: 360 YHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYA 419

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK---QKCR 582
             GR+ +A  +   ++ KG  P + TY ++I  YC+  R  ++++L+E+M SK    +  
Sbjct: 420 ALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVN 479

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE-----SYLNKGIPLLAY 637
           T  + V+  L    + E A ++   +       DA   +++VE     S  +K + +L  
Sbjct: 480 T-LSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQ 538

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +  R  +R   P       + E L   GK+++A  L+ +  ERG
Sbjct: 539 VIDKR--DRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERG 581



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 266/559 (47%), Gaps = 31/559 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY-SRAGKLRNAMYV 198
           D + +  +++ L K    + A RVL  + +RG+     AF  ++    ++   +  A  V
Sbjct: 160 DTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKV 219

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L ++      P +L+ N  I+       L  A + LE M   G  PNV T+  LI G C 
Sbjct: 220 LGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCK 279

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
            +R+ +A +L+++M + GCSP+ V+Y TV+  LCK                       QG
Sbjct: 280 ANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCK-----------------------QG 316

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           ++++A EL   M +  C P+VVT+  +++G C+   +++A+++  +M   GC P+ ++Y 
Sbjct: 317 QVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYN 376

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTP-NAITYSVVMHGLRREGKLSEACDVVREMVK 437
           + ++GLC + +  EA ++  T  E   +  NA+TYS + HG    G++++AC +   +V 
Sbjct: 377 SLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVD 436

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KGF P       LI   C+  +     + ++E  +KG    V   ++++ G  +    E 
Sbjct: 437 KGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTER 496

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK---GLVPTVVTYRT 554
           A+ L D M       D + Y  +++ +++  + ++A  ++ +++ K      P+      
Sbjct: 497 AIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDA 556

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           ++   CQVG+ +D  +LL KM  +      ++YN+++  L      +EA ++   ++   
Sbjct: 557 LVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAG 616

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
              + ST +V++    +      AY++  RM      PD++ C  +       G+++ A 
Sbjct: 617 PAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLAR 676

Query: 673 TLMLRFVERGHIQPKSEEH 691
            L+    E G ++P    H
Sbjct: 677 KLLEEMTEAG-LEPNDTTH 694



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/327 (21%), Positives = 149/327 (45%), Gaps = 16/327 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIEC-RPEAFSYLMVAYSRAGKLRNAMYV 198
           D I Y  +++ L K+     A ++ + +   G+       +S L   Y+  G++ +A  +
Sbjct: 371 DIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRI 430

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
            SM+     +P+L    + I      ++  + +  +E M   G  P V T + ++ G  +
Sbjct: 431 FSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFE 490

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR-------IKEVRDLMEKMVNDS 311
            +  + AI+L D M  +GC+ D + Y  V+  + +  +       +++V D  ++  N S
Sbjct: 491 GNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPS 550

Query: 312 NLFHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
           +   D         G+ ++AK+L+++MS+ G    V +Y  +++G  R+   D+A ++ +
Sbjct: 551 SSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFE 610

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M   G  P   +    ++ LC   K  +A E++    +    P+  T + ++ G  + G
Sbjct: 611 AMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSG 670

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLL 450
           +   A  ++ EM + G  P     +LL
Sbjct: 671 RADLARKLLEEMTEAGLEPNDTTHDLL 697


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 269/521 (51%), Gaps = 16/521 (3%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           + S L+  + +  K   A  VL++M K   A N+   N  +  L    +  KA+  L  M
Sbjct: 109 SLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREM 168

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           +   + P+V++YN +I+G+C+   ++ A++L +EM   GCS   V++  ++   CK  ++
Sbjct: 169 RQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKM 228

Query: 298 KEVRDLMEKMVN---DSNL---------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            E   L+++M +   +++L         F D G ++  K L +++ + G  P  +TY  +
Sbjct: 229 DEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           + GFC++G L +A ++ + M   G +PN  +YT  ++GLC  GK+ EA +++N   ++  
Sbjct: 289 IRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE 348

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            PN +TY+++++ L ++  +++A ++V  M K+   P  +  N L+  LC +G +D A K
Sbjct: 349 EPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASK 408

Query: 466 FMQECLNKGCAV--NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            +   L        +V++F +LI G C+   L +AL + D +       D VT   ++++
Sbjct: 409 LLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNS 468

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
             K+G V +A EL  ++ +  +VP   TY T+I  +C+ G +     LL KM   +   +
Sbjct: 469 TLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPS 528

Query: 584 A--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              YN ++ +LC  G L++A ++  ++ R  S  D  + +++++  L  G    A  +  
Sbjct: 529 VFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLV 588

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            M +  L PDL    K+  R +  G  +EA +   + ++ G
Sbjct: 589 GMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSG 629



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/550 (24%), Positives = 251/550 (45%), Gaps = 31/550 (5%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSM 201
           Y ++L+ L +      A  +LR M +  +   P+  SY  V   +    +L  A+ + + 
Sbjct: 145 YNILLKGLCRNLEFGKAVSLLREMRQNSL--MPDVVSYNTVIRGFCEGKELEKALQLANE 202

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           MQ +  + +L+     I       K+ +A+  L+ M+  G+  +++ Y  LI+G+CD   
Sbjct: 203 MQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGE 262

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +     L DE+  +G SP  ++Y T++   CK                        GR++
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCK-----------------------LGRLK 299

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA E+   M + G  P+V TYT +++G C VG+  +A ++L  M     +PN V+Y   +
Sbjct: 300 EASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIII 359

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           N LC +    +A E++   ++    P+ ITY+ ++ GL  +G L EA  ++  M+K   +
Sbjct: 360 NKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 442 PTP--VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  +  N LI  LC+  ++  A       + K  A ++V    L+    + GD+ +A+
Sbjct: 420 TDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAM 479

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            L   +   K  P++ TYTT+ID   K G +  A  L+ KM    L P+V  Y  ++   
Sbjct: 480 ELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSL 539

Query: 560 CQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C+ G ++   +L E+M          ++N +I+     G ++ A  +L  +       D 
Sbjct: 540 CKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDL 599

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLR 677
            T   L+  +L  G    A     +M +    PD  +C  V +  I +G++++    + +
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKK 659

Query: 678 FVERGHIQPK 687
            V++  +  K
Sbjct: 660 LVDKDVVLDK 669



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 236/505 (46%), Gaps = 31/505 (6%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           RQ     D + Y  ++    + K  + A ++   M   G       +  L+ A+ +AGK+
Sbjct: 169 RQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKM 228

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             AM +L  M+   +  +L++  + I       +L +     + +   G +P  +TYN L
Sbjct: 229 DEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I+G+C L R+K+A ++ + M  +G  P+  +Y  ++  LC                    
Sbjct: 289 IRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCG------------------- 329

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                G+ +EA +L+N M Q    P+VVTY  ++N  C+   +  A ++++ M     +P
Sbjct: 330 ----VGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRP 385

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMIN--TSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           + ++Y + L GLC  G   EA +++     +  +  P+ I+++ ++HGL +  +L +A D
Sbjct: 386 DNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALD 445

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +   +V+K      V  N+L+ S  + G ++ A +  ++  N     N   +T++I GFC
Sbjct: 446 IYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFC 505

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           + G L  A  LL  M L +  P    Y  ++ +L K G +++A  L  +M      P V+
Sbjct: 506 KTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVI 565

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKM----LSKQKCRTAYNQVIENLCSFGYLEEAGKILG 606
           ++  +I    + G ++    LL  M    LS       Y+++I      GYL+EA     
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPD--LFTYSKLINRFLKLGYLDEAISFFD 623

Query: 607 KVLRTASKADASTCHVLVESYLNKG 631
           K++ +  + DA  C  +++  +++G
Sbjct: 624 KMIDSGFEPDAHICDSVLKYCISQG 648



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 192/413 (46%), Gaps = 16/413 (3%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P A +Y  L+  + + G+L+ A  +   M +  V PN+      I  L    K  +AL+ 
Sbjct: 280 PCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           L  M      PNV+TYN +I   C    + DA+++++ M  +   PD ++Y +++G LC 
Sbjct: 340 LNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCA 399

Query: 294 EKRIKEVRDLMEKMVNDSN-----------LFHD---QGRIEEAKELVNQMSQMGCIPDV 339
           +  + E   L+  M+ DS+           L H      R+ +A ++ + + +     D+
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDI 459

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           VT   ++N   + G++++A ++ +Q+ +    PN+ +YT  ++G C  G    A+ ++  
Sbjct: 460 VTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCK 519

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
                  P+   Y+ ++  L ++G L +A  +  EM +   FP  +  N++I    + G 
Sbjct: 520 MRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGD 579

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +  A+  +    + G + ++  ++ LI  F + G L+EA+S  D M     +PD     +
Sbjct: 580 IKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDS 639

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           ++      G  ++ TE + K++ K +V       TV+   C      D+ K L
Sbjct: 640 VLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRL 692



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 156/313 (49%), Gaps = 2/313 (0%)

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           E A     +M +     + V+ + ++  F ++ +   A  +L  M   G   N  +Y   
Sbjct: 89  EVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNIL 148

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           L GLC N +  +A  ++    +    P+ ++Y+ V+ G     +L +A  +  EM   G 
Sbjct: 149 LKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGC 208

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
             + V   +LI + C+ GKMD A   ++E  +KG   +++ +TSLIRGFC  G+L+   +
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKA 268

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L D++      P  +TY T+I    K GR++EA+E+   M+ +G+ P V TY  +I   C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLC 328

Query: 561 QVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
            VG+ ++ L+LL  ML K  +     YN +I  LC    + +A +I+  + +  ++ D  
Sbjct: 329 GVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNI 388

Query: 619 TCHVLVESYLNKG 631
           T + L+     KG
Sbjct: 389 TYNSLLGGLCAKG 401



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 123/263 (46%), Gaps = 2/263 (0%)

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           +M  L R      A    R+M++   F   V ++ L++   +  K   A   +   L +G
Sbjct: 78  LMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRG 137

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
            A NV N+  L++G C+  +  +A+SLL +M      PD V+Y T+I    +   +E+A 
Sbjct: 138 FAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKAL 197

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
           +L  +M   G   ++VT+  +I  +C+ G++++ + LL++M  K  +     Y  +I   
Sbjct: 198 QLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGF 257

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G L+    +  +VL       A T + L+  +   G    A ++   M  R + P++
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNV 317

Query: 653 KLCKKVSERLILEGKSEEADTLM 675
                + + L   GK++EA  L+
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLL 340


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 249/524 (47%), Gaps = 61/524 (11%)

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           AGK   A  ++  M      P+    +  I +L   +K+  A    E M+   + P+V T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           Y  LI  +C +  ++ A K  DEM   GC+P+ V+Y  ++    K +++    +L E M+
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 309 NDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
           ++                       GCIP+VVTYTA+++G C+ G++++A ++  +M  +
Sbjct: 578 SE-----------------------GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614

Query: 369 GC----------------KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
                              PN  +Y A ++GLC   K  EAR++++    E   PN I Y
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
             ++ G  + GKL EA  V  +M ++G+ P     + LI  L ++ ++D A K +   L 
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
             CA NV+ +T +I G C+ G  +EA  L+  M      P+ VTYT +ID   K G+V++
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIE 590
             ELM +M +KG  P  VTYR +I+  C  G ++D  +LL++M      K    Y +VIE
Sbjct: 795 CLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIE 854

Query: 591 N-----LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV-----A 640
                 + S G L+E  + +   +  A +       +L++S+   G   LA ++     +
Sbjct: 855 GFNREFIISLGLLDEIAENVAVPIIPAYR-------ILIDSFCKAGRLELALELHKEMSS 907

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           C  ++     D  L   + E L L  K ++A  L    ++RG I
Sbjct: 908 CTSYSA---ADKDLYSSLIESLSLASKVDKAFELYADMIKRGGI 948



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 165/668 (24%), Positives = 279/668 (41%), Gaps = 82/668 (12%)

Query: 90  AWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLE 149
            +  K +  LR     L    +  VL    +  + ++FF WA RQ  Y H   VY+ +LE
Sbjct: 111 GFGHKTQKFLRQFREKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLE 170

Query: 150 ILSKTKLCQGAKRV----LRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           +L     C G  RV    LR +     E   +  + L+    R G    A+  L  ++  
Sbjct: 171 VLG----CGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDL 226

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
              P+ L  N  + V +  ++L  A      M  +G   +  T  C +   C   R ++A
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH---------- 315
           + LI++   K    D V Y  ++  LC+    +E  D + +M + S + +          
Sbjct: 287 LALIEKEEFK---LDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343

Query: 316 --DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
              + ++   K +++ M   GC P    + ++++ +CR G+   A K+L++M   GC+P 
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403

Query: 374 TVSYTAFLNGLCHNGK--SLEAREMINTSEEEWWTPNAITYSVVMHGLRR----EGKLSE 427
            V Y   + G+C N K  SL+  E+   +  E    + +   V +  L R     GK  +
Sbjct: 404 YVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEK 463

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++REM+ KGF P     + +I  LC   K+D A    +E  +     +V  +T LI 
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID 523

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            FC+ G L++A    D+M      P+ VTYT +I A  K  ++  A EL   MLS+G +P
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKM-------------------------------- 575
            VVTY  +I  +C+ G++E   ++  +M                                
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALV 643

Query: 576 ------------------LSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
                             +S + C      Y+ +I+  C  G L+EA  +  K+      
Sbjct: 644 DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG 703

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            +  T   L++         LA KV  RM   +  P++ +  ++ + L   GK++EA  L
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 675 MLRFVERG 682
           M    E+G
Sbjct: 764 MSMMEEKG 771



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 235/513 (45%), Gaps = 58/513 (11%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  ++R M  +G       +S ++     A K+ NA  +   M+   V P++      I 
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID 523

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  L +A ++ + M   G  PNV+TY  LI  Y    ++  A +L + M  +GC P
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFH--DQGRIEEAKELVNQMSQ 332
           + V+Y  ++   CK  +I++   +  +M     + D +++   D G I +          
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRD---------- 633

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
               P++ TY A+V+G C+  ++ +A+ +L  M   GC+PN + Y A ++G C  GK  E
Sbjct: 634 ----PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A+ +     E  + PN  TYS ++  L ++ +L  A  V+  M++    P  +    +I 
Sbjct: 690 AQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID 749

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+ GK D A + M     KGC  NVV +T++I GF + G +++ L L+  M      P
Sbjct: 750 GLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAP 809

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKM------------------------LSKGL--- 545
           + VTY  +I+     G +++A +L+ +M                        +S GL   
Sbjct: 810 NFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDE 869

Query: 546 ------VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA----YNQVIENLCSF 595
                 VP +  YR +I  +C+ GR+E  L+L ++M S      A    Y+ +IE+L   
Sbjct: 870 IAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLA 929

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
             +++A ++   +++     + S    LV+  +
Sbjct: 930 SKVDKAFELYADMIKRGGIPELSIFFYLVKGLI 962



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 153/615 (24%), Positives = 253/615 (41%), Gaps = 125/615 (20%)

Query: 156 LCQGAK--RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI 213
           LC+  +    L L+ +   +     ++ ++     A     AM  LS M+ ++  PN++ 
Sbjct: 277 LCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVT 336

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
               +   +   +L +  R L  M   G  P+   +N LI  YC       A KL+ +M 
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIK--EVRDLMEKM-------------VNDSNLFH--- 315
             GC P  V Y  ++G +C  +++   +V +L EK              VN SNL     
Sbjct: 397 DCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456

Query: 316 DQGRIEEAKELVNQMSQMGCI-----------------------------------PDVV 340
             G+ E+A  ++ +M   G I                                   PDV 
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVF 516

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TYT +++ FC+VG L QA+K   +M   GC PN V+YTA ++      K   A E+    
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG-------FF---------PTP 444
             E   PN +TY+ ++ G  + G++ +AC +   M           +F         P  
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI 636

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL----- 499
                L+  LC+  K+  A+  +     +GC  N + + +LI GFC+ G L+EA      
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696

Query: 500 --------------SLLDDMYLCKK----------------DPDTVTYTTIIDALSKNGR 529
                         SL+D ++  K+                 P+ + YT +ID L K G+
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
            +EA  LM  M  KG  P VVTY  +I  + + G+V+  L+L+ +M +K        Y  
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I + C+ G L++A ++L ++ +T               Y  K +    Y+     FNR 
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMKQT---------------YWPKHMA--GYRKVIEGFNRE 859

Query: 648 LIPDLKLCKKVSERL 662
            I  L L  +++E +
Sbjct: 860 FIISLGLLDEIAENV 874



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 174/401 (43%), Gaps = 32/401 (7%)

Query: 107 KPRQICAVLRSQADERVALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVL 164
           K  QI A +R  AD      +F   D   R   DP    Y  +++ L K    + A+ +L
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIR---DPNIFTYGALVDGLCKAHKVKEARDLL 659

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
            +M+  G E     +  L+  + + GKL  A  V + M +    PN+   ++ I  L   
Sbjct: 660 DVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKD 719

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            +L  AL+ L RM      PNV+ Y  +I G C + +  +A +L+  M  KGC P+ V+Y
Sbjct: 720 KRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTY 779

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
             ++                       + F   G++++  EL+ QM   GC P+ VTY  
Sbjct: 780 TAMI-----------------------DGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++N  C  G LD A ++L +M       +   Y   + G   N + + +  +++   E  
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENV 874

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE--INLLIQSLCREGKMDG 462
             P    Y +++    + G+L  A ++ +EM     +    +   + LI+SL    K+D 
Sbjct: 875 AVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDK 934

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
           A +   + + +G    +  F  L++G  +    EEAL L D
Sbjct: 935 AFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSD 975



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 157/347 (45%), Gaps = 30/347 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           IVY  +++   K      A+ V   M+ RG       +S L+    +  +L  A+ VLS 
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M + + APN++I    I  L    K  +A R +  M+  G  PNV+TY  +I G+    +
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +   ++L+ +M  KGC+P+ V+Y  ++ + C                         G ++
Sbjct: 792 VDKCLELMRQMGAKGCAPNFVTYRVLINHCCA-----------------------AGLLD 828

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +A +L+++M Q      +  Y  V+ GF R  E   +  +L ++  +   P   +Y   +
Sbjct: 829 DAHQLLDEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIAENVAVPIIPAYRILI 886

Query: 382 NGLCHNGKSLEAREMIN--TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
           +  C  G+   A E+    +S   +   +   YS ++  L    K+ +A ++  +M+K+G
Sbjct: 887 DSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRG 946

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
             P       L++ L R  + + A + + +C+ +   V+V N +SLI
Sbjct: 947 GIPELSIFFYLVKGLIRINRWEEALQ-LSDCICQ--MVHVSNSSSLI 990


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/520 (26%), Positives = 232/520 (44%), Gaps = 28/520 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRL---MARRGIECRPEAFSYLMVAYSRAGKLR 193
           + H P       ++L+     +    VL L   M   G+       + L+ ++    ++ 
Sbjct: 58  HMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVG 117

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  VL+ + K    P+     T I  L V  K+ +AL   ++M   G  PNV+TY  LI
Sbjct: 118 FAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLI 177

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            G C +     AI+L+  M    C PD V Y +++  LCK++++ E  +L  +MV     
Sbjct: 178 NGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ--- 234

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                               G  PD+ TYT++V+  C + E      +L QM +    P+
Sbjct: 235 --------------------GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPD 274

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            V ++  ++ LC  GK  EA E+++   +    P+ +TY+ +M G   + ++ EA  V  
Sbjct: 275 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 334

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            MV+KGF P  +    LI   C+  K+D A    +E   K    +   + +L+ G C  G
Sbjct: 335 MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVG 394

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            L++A++L  +M    + PD VTY+ ++D+L KN  +EEA  L+  + +  L P +  Y 
Sbjct: 395 RLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYN 454

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            +I   C+ G +E    L   + SK        YN +I  LC  G L EA K+  ++   
Sbjct: 455 IIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGN 514

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
               D  T + +   +L     L A ++   M  R    D
Sbjct: 515 DCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 244/508 (48%), Gaps = 29/508 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ + ++       + + + M    V PN+   N  I+     N++  A   L ++ 
Sbjct: 68  FAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKIL 127

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+  T+  LI+G C   +I +A+ L D+M  +G  P+ V+Y T++  LCK     
Sbjct: 128 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK----- 182

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                              G    A  L+  M Q  C PDVV YT++++  C+  ++ +A
Sbjct: 183 ------------------VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 224

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +  QM   G  P+  +YT+ ++ LC+  +      ++N        P+ + +S V+  
Sbjct: 225 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 284

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L +EGK++EA ++V  M+++G  P  V    L+   C + +MD A K     + KG A +
Sbjct: 285 LCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPD 344

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATEL 536
           V+++T+LI G+C+   +++A+ L ++M  C+K+  PDT TY T++  L   GR+++A  L
Sbjct: 345 VISYTTLINGYCKIHKIDKAMYLFEEM--CRKEWIPDTKTYNTLMYGLCHVGRLQDAIAL 402

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCS 594
             +M+++G +P +VTY  ++   C+   +E+ + LL+ + +         YN +I+ +C 
Sbjct: 403 FHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCR 462

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            G LE A  +   +          T ++++     +G+   A K+   M   +  PD   
Sbjct: 463 AGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCT 522

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERG 682
              ++   +   ++  A  L+   + RG
Sbjct: 523 YNTIARGFLQNNETLRAIQLLEEMLARG 550



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 179/363 (49%), Gaps = 3/363 (0%)

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L  QM   G  P+V T   ++N FC +  +  A  +L ++   G +P+  ++T  + GLC
Sbjct: 87  LSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC 146

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             GK  EA  + +   +E + PN +TY  +++GL + G  S A  ++R M +    P  V
Sbjct: 147 VEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVV 206

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               +I SLC++ ++  A     + + +G + ++  +TSL+   C   + +   +LL+ M
Sbjct: 207 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM 266

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
              K  PD V ++T++DAL K G+V EA E++  M+ +G+ P VVTY T++  +C    +
Sbjct: 267 VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 326

Query: 566 EDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           ++ +K+ + M+ K       +Y  +I   C    +++A  +  ++ R     D  T + L
Sbjct: 327 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 386

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +    + G    A  +   M  R  +PDL     + + L      EEA  L L+ +E  +
Sbjct: 387 MYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMAL-LKAIEASN 445

Query: 684 IQP 686
           + P
Sbjct: 446 LNP 448



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 174/387 (44%), Gaps = 16/387 (4%)

Query: 309 NDSNLFHDQG----RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           +  N FH +      +++A    N++  M   P +V +  ++    ++        +  Q
Sbjct: 31  SSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQ 90

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G  PN  +    +N  CH  +   A  ++    +    P+  T++ ++ GL  EGK
Sbjct: 91  MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 150

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + EA  +  +M+ +GF P  V    LI  LC+ G    A + ++      C  +VV +TS
Sbjct: 151 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 210

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +I   C+   + EA +L   M      PD  TYT+++ AL      +  T L+ +M++  
Sbjct: 211 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 270

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAG 602
           ++P VV + TV+   C+ G+V +  ++++ M+ +  +     Y  +++  C    ++EA 
Sbjct: 271 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAV 330

Query: 603 KILGKVLRTASKADASTCHVLVESY-----LNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
           K+   ++R     D  +   L+  Y     ++K + L  ++  CR   +  IPD K    
Sbjct: 331 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL--FEEMCR---KEWIPDTKTYNT 385

Query: 658 VSERLILEGKSEEADTLMLRFVERGHI 684
           +   L   G+ ++A  L    V RG +
Sbjct: 386 LMYGLCHVGRLQDAIALFHEMVARGQM 412


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 249/524 (47%), Gaps = 61/524 (11%)

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           AGK   A  ++  M      P+    +  I +L   +K+  A    E M+   + P+V T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           Y  LI  +C +  ++ A K  DEM   GC+P+ V+Y  ++    K +++    +L E M+
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 309 NDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
           ++                       GCIP+VVTYTA+++G C+ G++++A ++  +M  +
Sbjct: 578 SE-----------------------GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614

Query: 369 GC----------------KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
                              PN  +Y A ++GLC   K  EAR++++    E   PN I Y
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
             ++ G  + GKL EA  V  +M ++G+ P     + LI  L ++ ++D A K +   L 
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
             CA NV+ +T +I G C+ G  +EA  L+  M      P+ VTYT +ID   K G+V++
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIE 590
             ELM +M +KG  P  VTYR +I+  C  G ++D  +LL++M      K    Y +VIE
Sbjct: 795 CLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIE 854

Query: 591 N-----LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV-----A 640
                 + S G L+E  + +   +  A +       +L++S+   G   LA ++     +
Sbjct: 855 GFNREFIISLGLLDEIAENVAVPIIPAYR-------ILIDSFCKAGRLELALELHKEMSS 907

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           C  ++     D  L   + E L L  K ++A  L    ++RG I
Sbjct: 908 CTSYSA---ADKDLYSSLIESLSLASKVDKAFELYADMIKRGGI 948



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 165/668 (24%), Positives = 279/668 (41%), Gaps = 82/668 (12%)

Query: 90  AWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLE 149
            +  K +  LR     L    +  VL    +  + ++FF WA RQ  Y H   VY+ +LE
Sbjct: 111 GFGHKTQKFLRQFREKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLE 170

Query: 150 ILSKTKLCQGAKRV----LRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           +L     C G  RV    LR +     E   +  + L+    R G    A+  L  ++  
Sbjct: 171 VLG----CGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDL 226

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
              P+ L  N  + V +  ++L  A      M  +G   +  T  C +   C   R ++A
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH---------- 315
           + LI++   K    D V Y  ++  LC+    +E  D + +M + S + +          
Sbjct: 287 LALIEKEEFK---LDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343

Query: 316 --DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
              + ++   K +++ M   GC P    + ++++ +CR G+   A K+L++M   GC+P 
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403

Query: 374 TVSYTAFLNGLCHNGK--SLEAREMINTSEEEWWTPNAITYSVVMHGLRR----EGKLSE 427
            V Y   + G+C N K  SL+  E+   +  E    + +   V +  L R     GK  +
Sbjct: 404 YVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEK 463

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++REM+ KGF P     + +I  LC   K+D A    +E  +     +V  +T LI 
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID 523

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            FC+ G L++A    D+M      P+ VTYT +I A  K  ++  A EL   MLS+G +P
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKM-------------------------------- 575
            VVTY  +I  +C+ G++E   ++  +M                                
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALV 643

Query: 576 ------------------LSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
                             +S + C      Y+ +I+  C  G L+EA  +  K+      
Sbjct: 644 DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG 703

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            +  T   L++         LA KV  RM   +  P++ +  ++ + L   GK++EA  L
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 675 MLRFVERG 682
           M    E+G
Sbjct: 764 MSMMEEKG 771



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 250/543 (46%), Gaps = 34/543 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  ++R M  +G       +S ++     A K+ NA  +   M+   V P++      I 
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID 523

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  L +A ++ + M   G  PNV+TY  LI  Y    ++  A +L + M  +GC P
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFH--DQGRIEEAKELVNQMSQ 332
           + V+Y  ++   CK  +I++   +  +M     + D +++   D G I +          
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRD---------- 633

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
               P++ TY A+V+G C+  ++ +A+ +L  M   GC+PN + Y A ++G C  GK  E
Sbjct: 634 ----PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A+ +     E  + PN  TYS ++  L ++ +L  A  V+  M++    P  +    +I 
Sbjct: 690 AQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID 749

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+ GK D A + M     KGC  NVV +T++I GF + G +++ L L+  M      P
Sbjct: 750 GLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAP 809

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           + VTY  +I+     G +++A +L+ +M        +  YR VI  + +   +   L LL
Sbjct: 810 NFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIIS--LGLL 867

Query: 573 EKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKV--LRTASKADASTCHVLVESYL 628
           +++          AY  +I++ C  G LE A ++  ++    + S AD      L+ES  
Sbjct: 868 DEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLS 927

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL-------MLRFVER 681
                  A+++   M  R  IP+L +   + + LI   + EEA  L       M+ FV  
Sbjct: 928 LASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCICQMMVDFVRE 987

Query: 682 GHI 684
           G +
Sbjct: 988 GFL 990



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 153/615 (24%), Positives = 253/615 (41%), Gaps = 125/615 (20%)

Query: 156 LCQGAK--RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI 213
           LC+  +    L L+ +   +     ++ ++     A     AM  LS M+ ++  PN++ 
Sbjct: 277 LCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVT 336

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
               +   +   +L +  R L  M   G  P+   +N LI  YC       A KL+ +M 
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIK--EVRDLMEKM-------------VNDSNLFH--- 315
             GC P  V Y  ++G +C  +++   +V +L EK              VN SNL     
Sbjct: 397 DCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456

Query: 316 DQGRIEEAKELVNQMSQMGCI-----------------------------------PDVV 340
             G+ E+A  ++ +M   G I                                   PDV 
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVF 516

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TYT +++ FC+VG L QA+K   +M   GC PN V+YTA ++      K   A E+    
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG-------FF---------PTP 444
             E   PN +TY+ ++ G  + G++ +AC +   M           +F         P  
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI 636

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA------ 498
                L+  LC+  K+  A+  +     +GC  N + + +LI GFC+ G L+EA      
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696

Query: 499 -------------LSLLDDMYLCKK----------------DPDTVTYTTIIDALSKNGR 529
                         SL+D ++  K+                 P+ + YT +ID L K G+
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
            +EA  LM  M  KG  P VVTY  +I  + + G+V+  L+L+ +M +K        Y  
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I + C+ G L++A ++L ++ +T               Y  K   +  Y+     FNR 
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMKQT---------------YWPK--HMAGYRKVIEGFNRE 859

Query: 648 LIPDLKLCKKVSERL 662
            I  L L  +++E +
Sbjct: 860 FIISLGLLDEIAENV 874



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 174/401 (43%), Gaps = 32/401 (7%)

Query: 107 KPRQICAVLRSQADERVALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVL 164
           K  QI A +R  AD      +F   D   R   DP    Y  +++ L K    + A+ +L
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIR---DPNIFTYGALVDGLCKAHKVKEARDLL 659

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
            +M+  G E     +  L+  + + GKL  A  V + M +    PN+   ++ I  L   
Sbjct: 660 DVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKD 719

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            +L  AL+ L RM      PNV+ Y  +I G C + +  +A +L+  M  KGC P+ V+Y
Sbjct: 720 KRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTY 779

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
             ++                       + F   G++++  EL+ QM   GC P+ VTY  
Sbjct: 780 TAMI-----------------------DGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++N  C  G LD A ++L +M       +   Y   + G   N + + +  +++   E  
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENV 874

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE--INLLIQSLCREGKMDG 462
             P    Y +++    + G+L  A ++ +EM     +    +   + LI+SL    K+D 
Sbjct: 875 AVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDK 934

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
           A +   + + +G    +  F  L++G  +    EEAL L D
Sbjct: 935 AFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSD 975



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 153/335 (45%), Gaps = 23/335 (6%)

Query: 142  IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
            IVY  +++   K      A+ V   M+ RG       +S L+    +  +L  A+ VLS 
Sbjct: 672  IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731

Query: 202  MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
            M + + APN++I    I  L    K  +A R +  M+  G  PNV+TY  +I G+    +
Sbjct: 732  MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791

Query: 262  IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG--R 319
            +   ++L+ +M  KGC+P+ V+Y  ++ + C    + +   L+++M       H  G  +
Sbjct: 792  VDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851

Query: 320  IEEAKE--------LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
            + E           L++++++   +P +  Y  +++ FC+ G L+ A ++ ++M    C 
Sbjct: 852  VIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM--SSCT 909

Query: 372  PNTVS----YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
              + +    Y++ +  L    K  +A E+     +    P    +  ++ GL R  +  E
Sbjct: 910  SYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEE 969

Query: 428  A-------CDVVREMVKKGFFPTPVEINLLIQSLC 455
            A       C ++ + V++GF  +  +   L  +LC
Sbjct: 970  ALQLSDCICQMMVDFVREGFLGSSHDYEFLNWTLC 1004


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 249/524 (47%), Gaps = 61/524 (11%)

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           AGK   A  ++  M      P+    +  I +L   +K+  A    E M+   + P+V T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           Y  LI  +C +  ++ A K  DEM   GC+P+ V+Y  ++    K +++    +L E M+
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577

Query: 309 NDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
           ++                       GCIP+VVTYTA+++G C+ G++++A ++  +M  +
Sbjct: 578 SE-----------------------GCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614

Query: 369 GC----------------KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
                              PN  +Y A ++GLC   K  EAR++++    E   PN I Y
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
             ++ G  + GKL EA  V  +M ++G+ P     + LI  L ++ ++D A K +   L 
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
             CA NV+ +T +I G C+ G  +EA  L+  M      P+ VTYT +ID   K G+V++
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIE 590
             ELM +M +KG  P  VTYR +I+  C  G ++D  +LL++M      K    Y +VIE
Sbjct: 795 CLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIE 854

Query: 591 N-----LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV-----A 640
                 + S G L+E  + +   +  A +       +L++S+   G   LA ++     +
Sbjct: 855 GFNREFIISLGLLDEIAENVAVPIIPAYR-------ILIDSFCKAGRLELALELHKXMSS 907

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           C  ++     D  L   + E L L  K ++A  L    ++RG I
Sbjct: 908 CTSYSA---ADKDLYSSLIESLSLASKVDKAFELYADMIKRGGI 948



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 165/668 (24%), Positives = 279/668 (41%), Gaps = 82/668 (12%)

Query: 90  AWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLE 149
            +  K +  LR     L    +  VL    +  + ++FF WA RQ  Y H   VY+ +LE
Sbjct: 111 GFGHKTQKFLRQFREKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLE 170

Query: 150 ILSKTKLCQGAKRV----LRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           +L     C G  RV    LR +     E   +  + L+    R G    A+  L  ++  
Sbjct: 171 VLG----CGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDL 226

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
              P+ L  N  + V +  ++L  A      M  +G   +  T  C +   C   R ++A
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH---------- 315
           + LI++   K    D V Y  ++  LC+    +E  D + +M + S + +          
Sbjct: 287 LALIEKEEFK---LDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343

Query: 316 --DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
              + ++   K +++ M   GC P    + ++++ +CR G+   A K+L++M   GC+P 
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403

Query: 374 TVSYTAFLNGLCHNGK--SLEAREMINTSEEEWWTPNAITYSVVMHGLRR----EGKLSE 427
            V Y   + G+C N K  SL+  E+   +  E    + +   V +  L R     GK  +
Sbjct: 404 YVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEK 463

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++REM+ KGF P     + +I  LC   K+D A    +E  +     +V  +T LI 
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID 523

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            FC+ G L++A    D+M      P+ VTYT +I A  K  ++  A EL   MLS+G +P
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKM-------------------------------- 575
            VVTY  +I  +C+ G++E   ++  +M                                
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALV 643

Query: 576 ------------------LSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
                             +S + C      Y+ +I+  C  G L+EA  +  K+      
Sbjct: 644 DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG 703

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            +  T   L++         LA KV  RM   +  P++ +  ++ + L   GK++EA  L
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763

Query: 675 MLRFVERG 682
           M    E+G
Sbjct: 764 MSMMEEKG 771



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 234/513 (45%), Gaps = 58/513 (11%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  ++R M  +G       +S ++     A K+ NA  +   M+   V P++      I 
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID 523

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  L +A ++ + M   G  PNV+TY  LI  Y    ++  A +L + M  +GC P
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFH--DQGRIEEAKELVNQMSQ 332
           + V+Y  ++   CK  +I++   +  +M     + D +++   D G I +          
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRD---------- 633

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
               P++ TY A+V+G C+  ++ +A+ +L  M   GC+PN + Y A ++G C  GK  E
Sbjct: 634 ----PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A+ +     E  + PN  TYS ++  L ++ +L  A  V+  M++    P  +    +I 
Sbjct: 690 AQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID 749

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+ GK D A + M     KGC  NVV +T++I GF + G +++ L L+  M      P
Sbjct: 750 GLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAP 809

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKM------------------------LSKGL--- 545
           + VTY  +I+     G +++A +L+ +M                        +S GL   
Sbjct: 810 NFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDE 869

Query: 546 ------VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA----YNQVIENLCSF 595
                 VP +  YR +I  +C+ GR+E  L+L + M S      A    Y+ +IE+L   
Sbjct: 870 IAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLA 929

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
             +++A ++   +++     + S    LV+  +
Sbjct: 930 SKVDKAFELYADMIKRGGIPELSIFFYLVKGLI 962



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 153/615 (24%), Positives = 253/615 (41%), Gaps = 125/615 (20%)

Query: 156 LCQGAK--RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI 213
           LC+  +    L L+ +   +     ++ ++     A     AM  LS M+ ++  PN++ 
Sbjct: 277 LCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVT 336

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
               +   +   +L +  R L  M   G  P+   +N LI  YC       A KL+ +M 
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIK--EVRDLMEKM-------------VNDSNLFH--- 315
             GC P  V Y  ++G +C  +++   +V +L EK              VN SNL     
Sbjct: 397 DCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456

Query: 316 DQGRIEEAKELVNQMSQMGCI-----------------------------------PDVV 340
             G+ E+A  ++ +M   G I                                   PDV 
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVF 516

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TYT +++ FC+VG L QA+K   +M   GC PN V+YTA ++      K   A E+    
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG-------FF---------PTP 444
             E   PN +TY+ ++ G  + G++ +AC +   M           +F         P  
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI 636

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL----- 499
                L+  LC+  K+  A+  +     +GC  N + + +LI GFC+ G L+EA      
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696

Query: 500 --------------SLLDDMYLCKK----------------DPDTVTYTTIIDALSKNGR 529
                         SL+D ++  K+                 P+ + YT +ID L K G+
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
            +EA  LM  M  KG  P VVTY  +I  + + G+V+  L+L+ +M +K        Y  
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I + C+ G L++A ++L ++ +T               Y  K   +  Y+     FNR 
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMKQT---------------YWPK--HMAGYRKVIEGFNRE 859

Query: 648 LIPDLKLCKKVSERL 662
            I  L L  +++E +
Sbjct: 860 FIISLGLLDEIAENV 874



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/464 (22%), Positives = 182/464 (39%), Gaps = 104/464 (22%)

Query: 107 KPRQICAVLRSQADERVALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVL 164
           K  QI A +R  AD      +F   D   R   DP    Y  +++ L K    + A+ +L
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIR---DPNIFTYGALVDGLCKAHKVKEARDLL 659

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
            +M+  G E     +  L+  + + GKL  A  V + M +    PN+   ++ I  L   
Sbjct: 660 DVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKD 719

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            +L  AL+ L RM      PNV+ Y  +I G C + +  +A +L+  M  KGC P+ V+Y
Sbjct: 720 KRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTY 779

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
             ++                       + F   G++++  EL+ QM   GC P+ VTY  
Sbjct: 780 TAMI-----------------------DGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++N  C  G LD A ++L +M                                   ++ +
Sbjct: 817 LINHCCAAGLLDDAHQLLDEM-----------------------------------KQTY 841

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA- 463
           W  +   Y  V+ G  RE  +S    ++ E+ +    P      +LI S C+ G+++ A 
Sbjct: 842 WPKHMAGYRKVIEGFNREFIISLG--LLDEIAENVAVPIIPAYRILIDSFCKAGRLELAL 899

Query: 464 --KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
              K M  C +   A                                    D   Y+++I
Sbjct: 900 ELHKXMSSCTSYSAA------------------------------------DKDLYSSLI 923

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
           ++LS   +V++A EL   M+ +G +P +  +  ++    ++ R 
Sbjct: 924 ESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRT 967


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 243/505 (48%), Gaps = 44/505 (8%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R+ I C   +F+ L+  +    KL  A+     + K  + P+++   T +H L V ++
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++AL F  +M      PNV+T+  L+ G C   RI +A+ L+D M   G  P +++Y T
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  +CK+       +L+ KM             EE   +         IP+VV Y+A++
Sbjct: 225 IVDGMCKKGDTVSALNLLRKM-------------EEVSHI---------IPNVVIYSAII 262

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C+ G    A+ +  +M   G  P+  +Y + + G C +G+  +A +++    E   +
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ +TY+ +++   +EGK  EA ++  EM+ +G  P  +  + +I   C++ ++D A+  
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
                 KGC+ N++ F +LI G+C    +++ + LL +M       DT TY T+I     
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN 586
            G +  A +L+ +M+S GL P +VT  T++   C  G+++D L++ + M   +K   A +
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
                                      + D  T ++L+   +N+G  L A ++   M +R
Sbjct: 503 PF----------------------NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 647 NLIPDLKLCKKVSERLILEGKSEEA 671
            ++PD      + + L  + + +EA
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEA 565



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 247/516 (47%), Gaps = 39/516 (7%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L   +     L +A+ + S M ++   P+++     + V+V   +    +   ++M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I  ++ ++N LIK +C   ++  A+    ++   G  PD V++ T++  LC E R+ E  
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
           D           FH             QM +  C P+VVT+T ++NG CR G + +A  +
Sbjct: 170 D----------FFH-------------QMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE-EWWTPNAITYSVVMHGLR 420
           L +M   G +P  ++Y   ++G+C  G ++ A  ++   EE     PN + YS ++  L 
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           ++G+ S+A ++  EM +KG FP     N +I   C  G+   A++ +QE L +  + +VV
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +LI  F ++G   EA  L D+M      P+T+TY+++ID   K  R++ A  +   M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYL 598
            +KG  P ++T+ T+I  YC   R++D ++LL +M         T YN +I      G L
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGI---PLLAYKV---------ACRMFNR 646
             A  +L +++ +    D  TC  L++   + G     L  +KV         A   FN 
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN- 505

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            + PD++    +   LI EGK  EA+ L      RG
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 224/447 (50%), Gaps = 38/447 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           ++Y  +++ L K      A+ +   M  +GI   P+ F+Y  ++V +  +G+  +A  +L
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI--FPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  ++P+++  N  I+  V   K  +A    + M   GI PN +TY+ +I G+C  
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           +R+  A  +   M  KGCSP+ +++ T++   C  KRI                      
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI---------------------- 411

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            ++  EL+++M++ G + D  TY  +++GF  VG+L+ A  +LQ+M   G  P+ V+   
Sbjct: 412 -DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470

Query: 380 FLNGLCHNGKSLEAREMINTSEEE-----------WWTPNAITYSVVMHGLRREGKLSEA 428
            L+GLC NGK  +A EM    ++               P+  TY++++ GL  EGK  EA
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            ++  EM  +G  P  +  + +I  LC++ ++D A +      +K  + NVV FT+LI G
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +C+ G +++ L L  +M       + +TY T+I    K G +  A ++  +M+S G+ P 
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            +T R ++        ++  + +LEK+
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 216/466 (46%), Gaps = 61/466 (13%)

Query: 174 CRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           CRP    F+ LM    R G++  A+ +L  M +  + P  +   T +  +        AL
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 232 RFLERMQ-LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
             L +M+ ++ I PNV+ Y+ +I   C   R  DA  L  EM  KG  PD  +Y +++  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
            C   R  +   L+++M+               N F  +G+  EA+EL ++M   G IP+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            +TY+++++GFC+   LD A+ M   M   GC PN +++   ++G C   +  +  E+++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE------------ 446
              E     +  TY+ ++HG    G L+ A D+++EM+  G  P  V             
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 447 ----------------------------------INLLIQSLCREGKMDGAKKFMQECLN 472
                                              N+LI  L  EGK   A++  +E  +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +G   + + ++S+I G C++  L+EA  + D M      P+ VT+TT+I+   K GRV++
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
             EL  +M  +G+V   +TY T+I  + +VG +   L + ++M+S 
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 228/463 (49%), Gaps = 24/463 (5%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---- 307
           L  G+ ++  ++DAI L  +M      P  V +  +MG + + +R   V  L +KM    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 308 ----VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
               +   N+    F    ++  A     +++++G  PDVVT+T +++G C    + +A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
               QM+   C+PN V++T  +NGLC  G+ +EA  +++   E+   P  ITY  ++ G+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 420 RREGKLSEACDVVREMVK-KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
            ++G    A +++R+M +     P  V  + +I SLC++G+   A+    E   KG   +
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +  + S+I GFC  G   +A  LL +M   K  PD VTY  +I+A  K G+  EA EL  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSF 595
           +ML +G++P  +TY ++I  +C+  R+ D  + +  +++ + C      +N +I+  C  
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
             +++  ++L ++  T   AD +T + L+  +   G    A  +   M +  L PD+  C
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVF 698
             + + L   GK ++A       +E   +  KS++ L     F
Sbjct: 469 DTLLDGLCDNGKLKDA-------LEMFKVMQKSKKDLDASHPF 504


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 241/480 (50%), Gaps = 25/480 (5%)

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
            +F++L+   ++        Y+ + M+ + ++P+    N  ++ L   N++ + L  +  
Sbjct: 97  SSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAG 156

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           +   G  P+++TY  LIKG C  HRI  A  L   M   GC+P+ ++Y T+M  LC+   
Sbjct: 157 ILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGN 216

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
           I     L ++M+NDS+L+    +                 P V++Y+ +++  C+    D
Sbjct: 217 ISIALKLHQEMLNDSSLYGINFK-----------------PVVISYSIIIDALCKDRRED 259

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A+ + ++M   G  P  +SYT+ ++G C  GK  EA+ + N    +   PN +T++V++
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLI 319

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
             L +EGK+ EA D++  M+++G  P  +  N LI+  C  G ++ A++      +KGC 
Sbjct: 320 DVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCE 379

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            +V+ +T LI G+C+   +EEA+ L + M    K PD  TY  ++  L + G+V +A +L
Sbjct: 380 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 439

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ-----KCRTAYNQVIEN 591
              M   G+   +  Y   ++  C+ G + + ++L  K+ S       +C   +N +I+ 
Sbjct: 440 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC---FNCLIDG 496

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC  G LE A ++  K+ +   + D  T ++++  +   G  + A  +  +M      PD
Sbjct: 497 LCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPD 556



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 223/486 (45%), Gaps = 21/486 (4%)

Query: 218 IHVLVVGNKLA-KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
           +H    GN  A +A +F   M  +  TP + ++  L+ G   +        L ++M L G
Sbjct: 67  LHNCKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSG 126

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSNLFHD---QGRIEEAK 324
            SPD  +   ++  LC   R+ E          R  +  +V  + L      + RI +A 
Sbjct: 127 ISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAA 186

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM------YHHGCKPNTVSYT 378
            L  +M ++GC P+ +TY  ++ G CR G +  A K+ Q+M      Y    KP  +SY+
Sbjct: 187 LLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYS 246

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++ LC + +  EAR++    + +  TP  I+Y+ ++HG    GK  EA  +  EMV +
Sbjct: 247 IIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQ 306

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  V  N+LI  LC+EGK+  AK  ++  + +G   N++ + SLI GFC  GDL  A
Sbjct: 307 GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSA 366

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             L   M     +PD + YT +I+   K  +VEEA +L   ML  G  P V TY  ++  
Sbjct: 367 RELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTG 426

Query: 559 YCQVGRVEDLLKLLE--KMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
             Q G+V D  KL    K+         Y   +  LC  G L EA ++  K+     K D
Sbjct: 427 LFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLD 486

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
               + L++     G    A+++  ++    L PD+     +       G+  +A+ L  
Sbjct: 487 IECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQ 546

Query: 677 RFVERG 682
           +  + G
Sbjct: 547 KMEKNG 552



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 226/471 (47%), Gaps = 21/471 (4%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYM-MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYL 182
           A QFF+     +     P+  +  +L  L+K K       +   M   GI       + L
Sbjct: 80  AFQFFHLM--MYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNIL 137

Query: 183 MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
           +       ++   + V++ + +    P+++   T I  L + ++++KA     RMQ  G 
Sbjct: 138 LNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGC 197

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEM----PLKGCS--PDKVSYYTVMGYLCKEKR 296
           TPN +TY  L+KG C    I  A+KL  EM     L G +  P  +SY  ++  LCK++R
Sbjct: 198 TPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRR 257

Query: 297 IKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTA 344
             E RDL E+M         ++ ++L H     G+ EEAK L N+M   G  P+VVT+  
Sbjct: 258 EDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNV 317

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++  C+ G++ +AK +L+ M   G  PN ++Y + + G C  G    ARE+  +   + 
Sbjct: 318 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 377

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P+ I Y+V+++G  +  K+ EA  +   M++ G  P       L+  L + GK+  AK
Sbjct: 378 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAK 437

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           K        G   ++  +   + G C+ G L EA+ L + +       D   +  +ID L
Sbjct: 438 KLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGL 497

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            K G++E A EL  K+  + L P VVTY  +IH +C+ G+V     L +KM
Sbjct: 498 CKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKM 548



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 176/364 (48%), Gaps = 23/364 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y ++++ L K +    A+ +   M  +G+     +++ L+  +   GK   A  + + 
Sbjct: 243 ISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNE 302

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    V PN++  N  I VL    K+ +A   LE M   GI PN+LTYN LI+G+C +  
Sbjct: 303 MVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGD 362

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +  A +L   MP KGC PD + Y  ++   CK                         ++E
Sbjct: 363 LNSARELFVSMPSKGCEPDVICYTVLINGYCKTS-----------------------KVE 399

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA +L N M Q+G  PDV TY A++ G  + G++  AKK+   M  +G   +   Y  FL
Sbjct: 400 EAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFL 459

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           NGLC NG   EA E+ N  +      +   ++ ++ GL + GKL  A ++  ++ ++   
Sbjct: 460 NGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQ 519

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N++I   CR G++  A    Q+    GC  + + + +LIRGF +   LE+ + L
Sbjct: 520 PDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVEL 579

Query: 502 LDDM 505
           L  M
Sbjct: 580 LHMM 583



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/226 (21%), Positives = 101/226 (44%), Gaps = 23/226 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y +++    KT   + A ++   M + G     + +  L+    + GK+ +A  + 
Sbjct: 381 DVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLF 440

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M+   +  +L I    ++ L     L +A+    +++   I  ++  +NCLI G C  
Sbjct: 441 GVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKA 500

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            +++ A +L +++P +   PD V+Y  ++   C+                        G+
Sbjct: 501 GKLETAWELFEKLPQEELQPDVVTYNIMIHEFCR-----------------------GGQ 537

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
           + +A  L  +M + GC PD +TY  ++ GF    +L++  ++L  M
Sbjct: 538 VVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 583



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 3/192 (1%)

Query: 117 SQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP 176
           S+ +E + L   Y    Q   R D   Y  +L  L +      AK++  +M   GI    
Sbjct: 396 SKVEEAMKL---YNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDL 452

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
             +   +    + G L  AM + + ++   +  ++   N  I  L    KL  A    E+
Sbjct: 453 YIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEK 512

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           +    + P+V+TYN +I  +C   ++  A  L  +M   GC+PDK++Y T++    + K+
Sbjct: 513 LPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKK 572

Query: 297 IKEVRDLMEKMV 308
           +++V +L+  MV
Sbjct: 573 LEKVVELLHMMV 584


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 155/587 (26%), Positives = 270/587 (45%), Gaps = 20/587 (3%)

Query: 113 AVLRSQADERVALQFFYWA--DRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           ++L+  A +     F +    D       +P V+ +++ +  +  +   A      M  R
Sbjct: 75  SILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIR 134

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMY--VLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
           G   +P  ++  M+  S     R  +       M  + V PN+   N  I VL V  KL 
Sbjct: 135 GF--KPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLK 192

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           KA+  L  M+  G  P +++YN L+   C   R K A+ LI  M  KG   D  +Y   +
Sbjct: 193 KAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFI 252

Query: 289 GYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCI 336
             LC+  R  +   +++KM N              N F  +G+I  A  + N+M ++   
Sbjct: 253 DSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLS 312

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P+++TY  ++NG+C  G  ++A ++L  M  +  +PN V+    LNGL  + K   AR +
Sbjct: 313 PNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNI 372

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +        + N I+++V++ GL R G L EA  ++ EM K G +P  +  ++LI   C+
Sbjct: 373 LERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCK 432

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            G ++ AK+ M +   +G   N V F++LI   C+ G++ E +     M L  ++ D  T
Sbjct: 433 VGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFT 492

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
             +++ +L +NG++ EA E +  +   GLVP  VT+  +I+ Y  VG       + +KM+
Sbjct: 493 CNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMI 552

Query: 577 S--KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
           S         Y  +++ LC      EA K+L K+       D  + + L+      G  L
Sbjct: 553 SCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLL 612

Query: 635 LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
            A ++   M   N++PD      +   LI EG+   A   + R +++
Sbjct: 613 EAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQK 659



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/567 (24%), Positives = 258/567 (45%), Gaps = 51/567 (8%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           + +VL  Q   + A+      +R   Y    + Y  +L    K    + A  ++  M  +
Sbjct: 181 LISVLCVQGKLKKAVNILTMMERNG-YVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECK 239

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           GI+     ++  + +  R  +      VL  M+   + PN +  NT I+  V   K+  A
Sbjct: 240 GIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVA 299

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
            R    M    ++PN++TYN LI GYC     ++A++L+D M      P++V+  T++  
Sbjct: 300 TRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNG 359

Query: 291 LCKEKRIKEVRDLMEKM-VNDSNL-----------FHDQGRIEEAKELVNQMSQMGCIPD 338
           L K  +    R+++E+  +N ++L               G ++EA +L+ +M + G  PD
Sbjct: 360 LYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPD 419

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF------------------ 380
           ++T++ ++NGFC+VG L++AK+++ ++Y  G  PN V ++                    
Sbjct: 420 IITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYA 479

Query: 381 ---LNG--------------LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
              LNG              LC NGK +EA E ++        PN++T+  +++G    G
Sbjct: 480 AMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVG 539

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
             S A  V  +M+  G  P+P     L++ LC+      A+K +++      AV+ +++ 
Sbjct: 540 DGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYN 599

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           +LI    + G+L EA+ L ++M      PD+ TYT I+  L + GR+  A   + +++ K
Sbjct: 600 TLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQK 659

Query: 544 GLVP-TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEE 600
            ++    + Y   I    + G+ +  L L ++M  K       A N + +     G +  
Sbjct: 660 EILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFS 719

Query: 601 AGKILGKVLRTASKADASTCHVLVESY 627
           A  ++ K        + +T ++L+  Y
Sbjct: 720 ASSLISKTRNKNVIPNLTTFNILLHGY 746



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/541 (24%), Positives = 229/541 (42%), Gaps = 50/541 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I + +++    K      AK V+  + R G       FS L+    + G +   M   
Sbjct: 419 DIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFY 478

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M       +   CN+ +  L    KL +A  FL  +   G+ PN +T++C+I GY ++
Sbjct: 479 AAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANV 538

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VND 310
                A  + D+M   G  P   +Y +++  LCK +   E R L++K+         ++ 
Sbjct: 539 GDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISY 598

Query: 311 SNLF---HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ-MY 366
           + L       G + EA  L  +M Q   +PD  TYT +++G  R G L  A   L + M 
Sbjct: 599 NTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQ 658

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKS-----------------------------------L 391
                 N++ YT F++GL   G+S                                    
Sbjct: 659 KEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVF 718

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
            A  +I+ +  +   PN  T+++++HG  R   +     +   M + GFFP  +  + LI
Sbjct: 719 SASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLI 778

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LC  G ++   K ++  + +   ++ + F  LIR  C+  DL++ + L  +M + +  
Sbjct: 779 LGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVS 838

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
            D  T   + D L +    +     M +ML KG +PT   Y T++ R C+VG ++   KL
Sbjct: 839 LDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKL 898

Query: 572 LEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
            ++M  L       A   ++  L   G +EEA  IL ++LR       ST   L+  +  
Sbjct: 899 KDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCK 958

Query: 630 K 630
           K
Sbjct: 959 K 959



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/477 (23%), Positives = 207/477 (43%), Gaps = 61/477 (12%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
             P  Y  +L++L K +    A+++L+ +    +     +++ L+V  S++G L  A+ + 
Sbjct: 559  SPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLF 618

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER-MQLAGITPNVLTYNCLIKGYCD 258
              M +  + P+       +  L+   +L  A  FL R MQ   +T N + Y C I G   
Sbjct: 619  EEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFK 678

Query: 259  LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
              + K A+ L  EM  KG S D ++             +  + D   +M          G
Sbjct: 679  AGQSKAALYLFKEMEEKGLSLDLIA-------------LNSITDGYSRM----------G 715

Query: 319  RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
            ++  A  L+++      IP++ T+  +++G+ R  ++    K+   M   G  PN ++Y 
Sbjct: 716  KVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYH 775

Query: 379  AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM------HGLRREGKLSEACDVV 432
            + + GLC++G      +M+     E  T + +T+++++      + L +   L+   +V 
Sbjct: 776  SLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVF 835

Query: 433  R-----------------------------EMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
            R                             EM+KKGF PT  +   +++ +CR G + GA
Sbjct: 836  RVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGA 895

Query: 464  KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
             K   + +  G +++     +++RG    G +EEA+ +L  M   KK P T T+TT++  
Sbjct: 896  FKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHV 955

Query: 524  LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
              K    +EA  L + M    +   +V Y  +I   C  G V   L   E++  KQK
Sbjct: 956  FCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEI--KQK 1010



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 92/419 (21%), Positives = 167/419 (39%), Gaps = 47/419 (11%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            + IVY   ++ L K    + A  + + M  +G+     A + +   YSR GK+ +A  ++
Sbjct: 665  NSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLI 724

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            S  +   V PNL   N  +H    G  +    +    M+ +G  PN LTY+ LI G C+ 
Sbjct: 725  SKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNH 784

Query: 260  HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-VNDSNLFHDQG 318
              ++  IK++     +  + D +++  ++   C+   + +V DL   M V   +L  D  
Sbjct: 785  GMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQ 844

Query: 319  RIEE---AKELVNQ--------MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
            +       + +V+Q        M + G IP    Y  ++   CRVG++  A K+  QM  
Sbjct: 845  KAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVA 904

Query: 368  HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
             G   +  +  A + GL   GK           EE  W                      
Sbjct: 905  LGISLDDAAECAMVRGLALCGKI----------EEAMW---------------------- 932

Query: 428  ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
               +++ M++    PT      L+   C++     A        +    +++V +  LI 
Sbjct: 933  ---ILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLIS 989

Query: 488  GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
              C  GD+  AL   +++      P+  TY  ++ A+S    V     ++  +  +GLV
Sbjct: 990  ACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLV 1048


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 156/600 (26%), Positives = 272/600 (45%), Gaps = 69/600 (11%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMAR-RGIECRPEAFSYLMV--AYSRAGKLRNAMYVLS 200
           Y ++L+ L      Q A  +L +MA  RG    P+  SY  V   + + G    A     
Sbjct: 161 YNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYH 220

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M    + P+++  N+ I  L     + KA+  L  M   G+ P+ +TYN ++ GYC   
Sbjct: 221 EMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 280

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
           + K+AI  + +M   G  PD V+Y  +M YLCK                        GR 
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK-----------------------NGRC 317

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            EA+++ + M++ G  P++ TY  ++ G+   G L +   +L  M  +G  P+   ++  
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           +      GK  +A  + +   ++   PNA+TY  V+  L + G++ +A     +M+ +G 
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  +  N LI  LC   K + A++ + E L++G  +N + F S+I   C++G + E+  
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L + M      P+ +TY T+I+     G+++EA +L+  M+S GL P  VTY T+I+ YC
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557

Query: 561 QVGRVEDLLKLLEKMLSK-----------------QKCRTA------------------- 584
           ++ R+ED L L ++M S                  Q  RTA                   
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617

Query: 585 -YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            YN ++  LC     ++A ++   +     K +A T ++++++ L  G    A  +    
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF------VERGHIQPKSEEHLQRQRV 697
            +  L+P+    + ++E +I +G  EE D L L        V+ G +     E LQR  +
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 234/482 (48%), Gaps = 22/482 (4%)

Query: 228 AKALRFLERMQLAG---ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           A A+    RM  AG   +TP++ TY  LI   C   R+      +  +  KG   D +++
Sbjct: 66  AAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAF 125

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVND----SNLFH---------DQGRIEEAKELVNQMS 331
             ++  LC +KR  +  D++ + + +     N+F          D+ R +EA EL++ M+
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMA 185

Query: 332 Q---MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
                G  PDVV+YT V+NGF + G+ D+A     +M   G  P+ V+Y + +  LC   
Sbjct: 186 DDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ 245

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              +A E++NT  +    P+ +TY+ ++HG    G+  EA   +++M   G  P  V  +
Sbjct: 246 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYS 305

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           LL+  LC+ G+   A+K       +G    +  + +L++G+  KG L E   LLD M   
Sbjct: 306 LLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 365

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD   ++ +I A +K G+V++A  +  KM  +GL P  VTY  VI   C+ GRVED 
Sbjct: 366 GIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 425

Query: 569 LKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           +   E+M+ +        YN +I  LC+    E A +++ ++L      +    + +++S
Sbjct: 426 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 485

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           +  +G  + + K+   M    + P++     +     L GK +EA  L+   V  G ++P
Sbjct: 486 HCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG-LKP 544

Query: 687 KS 688
            +
Sbjct: 545 NT 546



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 225/489 (46%), Gaps = 27/489 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++++ L K   C  A+++   M +RG++     +  L+  Y+  G L     +L
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +  + P+  + +  I       K+ +A+    +M+  G+ PN +TY  +I   C  
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R++DA+   ++M  +G SP  + Y +++  LC   +                       
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW---------------------- 457

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            E A+EL+ +M   G   + + + ++++  C+ G + +++K+ + M   G KPN ++Y  
Sbjct: 458 -ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +NG C  GK  EA ++++        PN +TYS +++G  +  ++ +A  + +EM   G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  +  N+++Q L +  +   AK+        G  + +  +  ++ G C+    ++AL
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +  ++ L     +  T+  +IDAL K GR +EA +L +   S GLVP   TYR +    
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 696

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
              G +E+L +L   M     C       N ++  L   G +  AG  L  +       +
Sbjct: 697 IGQGLLEELDQLFLSM-EDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 755

Query: 617 ASTCHVLVE 625
           AST  + ++
Sbjct: 756 ASTASLFID 764



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 177/443 (39%), Gaps = 100/443 (22%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNL----------- 211
           +L LM R GI      FS L+ AY++ GK+  AM V S M++  + PN            
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417

Query: 212 ------------------------LICNTAIHVLVVGNKLAKA----LRFLER------- 236
                                   ++ N+ IH L   NK  +A    L  L+R       
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477

Query: 237 ------------------------MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
                                   M   G+ PNV+TYN LI GYC   ++ +A+KL+  M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQ 332
              G  P+ V+Y T++   CK                         R+E+A  L  +M  
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKIS-----------------------RMEDALVLFKEMES 574

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G  PD++TY  ++ G  +      AK++  ++   G +    +Y   L+GLC N  + +
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A +M            A T+++++  L + G+  EA D+       G  P      L+ +
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA---LSLLDDMYLCK 509
           ++  +G ++   +      + GC V+      ++R   Q+G++  A   LS++D+ +   
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF-- 752

Query: 510 KDPDTVTYTTIIDALSKNGRVEE 532
              +  T +  ID LS  G+ +E
Sbjct: 753 -SLEASTASLFIDLLS-GGKYQE 773


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 234/516 (45%), Gaps = 25/516 (4%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI       + L+ ++    +L  A  VL+ + K    PN+   NT I  L V  K
Sbjct: 85  MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 144

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + + L   ++M   G  PNV+TY  LI G C +     AI+L+  M    C PD V Y +
Sbjct: 145 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 204

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LCK++++ +  +L  +M++                        G  P + TY +++
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQ-----------------------GISPSIFTYNSLI 241

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C + E      +L +M +    PN V ++  ++ LC  GK +EA ++++   +    
Sbjct: 242 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 301

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN +TY+ +M G     ++ EA  V   MV KGF P  V  + LI   C+  +++ A   
Sbjct: 302 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 361

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +E   K    N V +++L+ G C  G L++A++L  +M    + PD V+Y  ++D L K
Sbjct: 362 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 421

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTA 584
           N R++EA  L+  +    + P +  Y  VI   C+ G +E    L   + SK        
Sbjct: 422 NRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 481

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           Y  +I  LC  G L EA K+ G++ R     +  T +++   +L     L   ++   M 
Sbjct: 482 YTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML 541

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
            R    D+     + E L  +G  +    ++  F++
Sbjct: 542 ARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 222/458 (48%), Gaps = 25/458 (5%)

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           +  L    +M   GI PN+ T N LI  +C L R+  A  ++ ++   G  P+  ++ T+
Sbjct: 76  STVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTL 135

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +  LC E +I EV  L +KM+ +                       G  P+VVTY  ++N
Sbjct: 136 IRGLCVEGKIGEVLHLFDKMIGE-----------------------GFQPNVVTYGTLIN 172

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G C+VG    A ++L+ M    C+P+ V YT+ ++ LC + +  +A  + +    +  +P
Sbjct: 173 GLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISP 232

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           +  TY+ ++H L    +      ++ EMV     P  V  + ++ +LC+EGK+  A   +
Sbjct: 233 SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVV 292

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
              + +G   NVV + +L+ G C + +++EA+ + D M      PD V+Y+T+I+   K 
Sbjct: 293 DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 352

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAY 585
            R+E+A  L  +M  K L+P  VTY T++H  C VGR++D + L  +M+++ +     +Y
Sbjct: 353 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 412

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
             +++ LC    L+EA  +L  +  +    D     ++++     G    A  +   + +
Sbjct: 413 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 472

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           + L P++     +   L  +G   EA  L      +G+
Sbjct: 473 KGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 510



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 197/410 (48%), Gaps = 27/410 (6%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGK 191
           Q   + D +VY  +++ L K +    A  +   M  +GI   P  F+Y  L+ A     +
Sbjct: 192 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGIS--PSIFTYNSLIHALCNLCE 249

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
            ++   +L+ M  + + PN++I +T +  L    K+ +A   ++ M   G+ PNV+TYN 
Sbjct: 250 WKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNA 309

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           L+ G+C    + +A+K+ D M  KG +PD VSY T++   CK +RI++   L E+M    
Sbjct: 310 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCR-- 367

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                       KEL         IP+ VTY+ +++G C VG L  A  +  +M   G  
Sbjct: 368 ------------KEL---------IPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 406

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+ VSY   L+ LC N +  EA  ++   E     P+   Y++V+ G+ R G+L  A D+
Sbjct: 407 PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 466

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
              +  KG  P      ++I  LC++G +  A K   E   KG + N   +  + RGF +
Sbjct: 467 FSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLR 526

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
             +    + LL +M       D  T T +++ LS +G  +   +++ + L
Sbjct: 527 NNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 576



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 169/384 (44%), Gaps = 16/384 (4%)

Query: 312 NLFHDQG----RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N FH +      +++A    N+M  M   P +  +T ++    ++        +  QM  
Sbjct: 28  NTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDS 87

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN  +    +N  CH  +   A  ++    +    PN  T++ ++ GL  EGK+ E
Sbjct: 88  FGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGE 147

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
              +  +M+ +GF P  V    LI  LC+ G    A + ++      C  +VV +TS+I 
Sbjct: 148 VLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIID 207

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
             C+   + +A +L  +M      P   TY ++I AL      +  T L+ +M++  ++P
Sbjct: 208 SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP 267

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            VV + TV+   C+ G+V +   +++ M+ +  +     YN +++  C    ++EA K+ 
Sbjct: 268 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVF 327

Query: 606 GKVLRTASKADASTCHVLVESY-----LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
             ++      D  +   L+  Y     + K + L  ++  CR   + LIP+      +  
Sbjct: 328 DTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL--FEEMCR---KELIPNTVTYSTLMH 382

Query: 661 RLILEGKSEEADTLMLRFVERGHI 684
            L   G+ ++A  L    V RG I
Sbjct: 383 GLCHVGRLQDAIALFHEMVTRGQI 406


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 247/528 (46%), Gaps = 28/528 (5%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           H P +   ++++L +  L  G +R             P     L+   +  G L +A+  
Sbjct: 107 HRPHLAASLVDLLHRAALALGPRR----------SALPSVVDTLLSLLADHGLLDDAVRA 156

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L+ +++  V PN   CN  +  L    +     R  + + +    PNV T+N +I   C 
Sbjct: 157 LARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPV----PNVFTFNIVIDFLCK 212

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
              + +A  L   M   GCSPD V+Y +++    K   ++EV  L+ +M           
Sbjct: 213 EGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVT 272

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                N F   GR+E+A     +M + G + +VVT++  V+ FC+ G + +A K+  QM 
Sbjct: 273 YNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMR 332

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  PN  +YT+ ++G C  G+  +A  +++    +   PN +TY+V++ GL +EGK++
Sbjct: 333 VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVA 392

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA +V+  M + G     +    LI         + A   + +  NKG  ++V  + +LI
Sbjct: 393 EADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLI 452

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C+   ++EA SLL  M  C   P+TV YTTI+DAL K G+  EA  L+ K+L  G  
Sbjct: 453 WGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQ 512

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKI 604
           P VVTY  +I   C+ G + + +    KM  L       AY  +I+  C  G L +A  +
Sbjct: 513 PNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHL 572

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           + +++      D      L++ Y+ +     A+ +  +M    L  DL
Sbjct: 573 MNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDL 620



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 223/450 (49%), Gaps = 12/450 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++   K    +  ++++  M + G       ++ L+  +S+ G++  A    
Sbjct: 234 DVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYF 293

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++  V  N++  +T +        + +A++   +M++ G+ PN  TY  L+ G C  
Sbjct: 294 GEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKA 353

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEKMVNDSN---- 312
            R+ DAI L+DEM  +G  P+ V+Y  ++  LCKE ++ E   V  LME+    +N    
Sbjct: 354 GRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLY 413

Query: 313 --LFHDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
             L H        E A +L+NQM   G   DV  Y  ++ G C+  ++D+AK +L +M  
Sbjct: 414 TTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAG 473

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G +PNTV YT  ++ L   GK  EA  +++   +  + PN +TY  ++ GL + G +SE
Sbjct: 474 CGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISE 533

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A     +M + G  P       LI   C+ G ++ A   M E ++KG +++ V +TSLI 
Sbjct: 534 AISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLID 593

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G+ ++ +L++A +L   M       D   YT  I        ++EA  ++ +M+  G+ P
Sbjct: 594 GYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITP 653

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
               Y  +I +Y ++G +E+   L  +M S
Sbjct: 654 DKTVYNCLIRKYQKLGNMEEASSLQNEMES 683



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 114/246 (46%), Gaps = 38/246 (15%)

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P     N++I  LC+EG++  A+         GC+ +VV + SLI G+ + GDLEE   L
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           + +M       D VTY  +I+  SK GR+E+A     +M  +G+V  VVT+ T +  +C+
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 562 VGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G V++ +KL  +M  +        Y  +++  C  G L++A  +L +++      +  T
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
             V+V+                            LCK        EGK  EAD + L  +
Sbjct: 378 YTVMVDG---------------------------LCK--------EGKVAEADNV-LSLM 401

Query: 680 ERGHIQ 685
           ERG ++
Sbjct: 402 ERGGVK 407



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/171 (20%), Positives = 81/171 (47%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           ++ + + Y  +++ L K      A      M   G++   +A++ L+  + + G L  AM
Sbjct: 511 FQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAM 570

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           ++++ M    ++ + ++  + I   +    L  A     +M  +G+  ++  Y C I G+
Sbjct: 571 HLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGF 630

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           C+++ +++A  ++ EM   G +PDK  Y  ++    K   ++E   L  +M
Sbjct: 631 CNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/228 (18%), Positives = 88/228 (38%), Gaps = 23/228 (10%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + ++Y  +++ L K      A  +L  +   G +     +  L+    +AG +  A+ 
Sbjct: 477 RPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAIS 536

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
             + M++  + PN+      I        L KA+  +  M   G++ + + Y  LI GY 
Sbjct: 537 HFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYM 596

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               ++DA  L  +M   G   D   Y   +   C    ++E R ++ +M+         
Sbjct: 597 KQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIG-------- 648

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                           G  PD   Y  ++  + ++G +++A  +  +M
Sbjct: 649 ---------------TGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 237/494 (47%), Gaps = 28/494 (5%)

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           CN  I V V  N+   A+    +M++  I  N+ ++N LIK +CD H++  ++    ++ 
Sbjct: 109 CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD----------------- 316
             G  PD V++ T++  LC E RI E   L   MV   +LF                   
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLI 228

Query: 317 -----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                +GR+ EA  LVN+M   G   DVVTY  +VNG C++G+   A  +L +M     K
Sbjct: 229 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 288

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+ V Y+A ++ LC +G   +A+ + +   E+   PN  TY+ ++ G    G+ S+A  +
Sbjct: 289 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 348

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           +R+M+++   P  +  N LI +  +EGK+  A+K   E L++    + V + S+I GFC+
Sbjct: 349 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 408

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
               ++A  + D M      PD VT+ TIID   +  RV+E  +L+ ++  +GLV    T
Sbjct: 409 HNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 464

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVL 609
           Y T+IH +C+V  +     L ++M+S   C      N ++   C    LEEA ++   + 
Sbjct: 465 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 524

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
            +    D    ++++           A+ + C +    + PD++    +      +    
Sbjct: 525 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 584

Query: 670 EADTLMLRFVERGH 683
           +A+ L  +  + GH
Sbjct: 585 DANVLFHKMKDNGH 598



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 127/526 (24%), Positives = 239/526 (45%), Gaps = 65/526 (12%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  + R M  R I     +F+ L+  +    KL  ++     + K    P+++  NT +H
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 220 VLVVGNKLAKAL----------RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
            L + +++++AL             ++M   G+TP V+T+N LI G C   R+ +A  L+
Sbjct: 185 GLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 244

Query: 270 DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------------- 316
           ++M  KG   D V+Y T++  +CK    K   +L+ KM  ++++  D             
Sbjct: 245 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM-EETHIKPDVVIYSAIIDRLCK 303

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC-------------------------- 350
            G   +A+ L ++M + G  P+V TY  +++GFC                          
Sbjct: 304 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 363

Query: 351 ---------RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
                    + G+L +A+K+  +M H    P+TV+Y + + G C + +  +A+ M +   
Sbjct: 364 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL-- 421

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
               +P+ +T++ ++    R  ++ E   ++RE+ ++G        N LI   C    ++
Sbjct: 422 --MASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 479

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A+   QE ++ G   + +    L+ GFC+   LEEAL L + + + K D DTV Y  II
Sbjct: 480 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 539

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--Q 579
             + K  +V+EA +L   +   G+ P V TY  +I  +C    + D   L  KM     +
Sbjct: 540 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 599

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
              + YN +I      G ++++ +++ ++       DA T  ++ +
Sbjct: 600 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 645



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 193/407 (47%), Gaps = 9/407 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++  + K    + A  +L  M    I+     +S ++    + G   +A Y+ 
Sbjct: 255 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 314

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S M +  +APN+   N  I       + + A R L  M    I P+VLT+N LI      
Sbjct: 315 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 374

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            ++ +A KL DEM  +   PD V+Y +++   CK  R  + + + + M +          
Sbjct: 375 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 434

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           +++    R++E  +L+ ++S+ G + +  TY  +++GFC V  L+ A+ + Q+M  HG  
Sbjct: 435 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 494

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+T++    L G C N K  EA E+    +      + + Y++++HG+ +  K+ EA D+
Sbjct: 495 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 554

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
              +   G  P     N++I   C +  +  A     +  + G   +   + +LIRG  +
Sbjct: 555 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 614

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            G++++++ L+ +M       D  T   + D ++ +GR++++   M+
Sbjct: 615 AGEIDKSIELISEMRSNGFSGDAFTIKMVADLIT-DGRLDKSFSDML 660



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 115/274 (41%), Gaps = 13/274 (4%)

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L +A D    MV+   F T V+ N +I    R  + D A    ++   +   +N+ +F  
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA----------T 534
           LI+ FC    L  +LS    +      PD VT+ T++  L    R+ EA           
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
            L  +M+  GL P V+T+ T+I+  C  GRV +   L+ KM+ K        Y  ++  +
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G  + A  +L K+  T  K D      +++     G    A  +   M  + + P++
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
                + +     G+  +A  L+   +ER  I P
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINP 359


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 247/508 (48%), Gaps = 20/508 (3%)

Query: 138 RHDPIVY-YMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           + D  +Y YM+L       L +  K  L +           A++  +    ++GK+  A 
Sbjct: 266 KPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAF 325

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
                MQ++ ++ +  + +  I +L+   ++ KA      +    I P+  T + +I+  
Sbjct: 326 EACRTMQES-LSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQEL 384

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
           C   R+  A+ L++ M  +G  PD  ++  ++  LCK  +I+E ++ ++ M         
Sbjct: 385 CKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSS 444

Query: 312 ---------NLFHDQGRIEEAKELVNQM-SQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                    N      ++ +A  + + M S+   +PDVV+Y+ +++GFC++ EL +A+K+
Sbjct: 445 SCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKL 504

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
            +QM    C PN  +Y AFLNGL   G+  +A+ +         +P+ ITYS ++HG   
Sbjct: 505 YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSL 564

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
             K  +A ++   M+ +G  P  V  N L+  LC+E K D A +  ++ + +GC  + V 
Sbjct: 565 ARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVT 624

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +T+L+ GFC  G +E+A+ + D+M     DPD V Y  ++    + G+  EA +L   M+
Sbjct: 625 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMV 684

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYL 598
           S+   P  V++  +I    +  R++D +++ E+M     C      YN +I  LC    L
Sbjct: 685 SRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRL 744

Query: 599 EEAGKILGKVLRTASKADASTCHVLVES 626
            EA K+  ++ R     D    +VL+E+
Sbjct: 745 SEAMKVFKEIDRLKLSPDPHAFNVLLEA 772



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 200/433 (46%), Gaps = 51/433 (11%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
           VY M++ +L ++     A+     +A R I+        ++    +AG++ +A+ +L  M
Sbjct: 341 VYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETM 400

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM--QLAGITPNVLTYNCLIKGYCDLH 260
            K    P++   +  I+ L   +K+ +A  FL+ M  +++  + +  +YN L+   C   
Sbjct: 401 IKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAK 460

Query: 261 RIKDAIKLIDEM-PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN--------DS 311
           ++  A  +   M   +   PD VSY  ++   CK   +     L ++M++          
Sbjct: 461 KVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTY 520

Query: 312 NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N F +    +GRI +A+ +  +M   GC PDV+TY+ +++GF    + DQA ++ + M  
Sbjct: 521 NAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMIS 580

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC+PN V+Y   L+GLC   K  EA E+     E    P+ +TY+ +++G    GK+ +
Sbjct: 581 RGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQ 640

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK-------------- 473
           A +V  EMV KG  P  V  N L++   R GK   AK+  Q  +++              
Sbjct: 641 AVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMID 700

Query: 474 ----------------------GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
                                 GC+ ++V + SLI G C +  L EA+ +  ++   K  
Sbjct: 701 GLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLS 760

Query: 512 PDTVTYTTIIDAL 524
           PD   +  +++A+
Sbjct: 761 PDPHAFNVLLEAI 773



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 147/585 (25%), Positives = 241/585 (41%), Gaps = 90/585 (15%)

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+     +Q      ++   N  +  L+    L +A +  E+M   G+ PN  TY  L++
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQ 172

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL---CKEKRIKEV--RDL-----M 304
             C      +A++   EM  KG  P    Y  V   L    KE     V  RDL     +
Sbjct: 173 SSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAV 232

Query: 305 EKMVNDSNL--FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
           E M+  + L  F  Q +  EA +L   M + GC PD   Y+ +V   C++  LD+A K+ 
Sbjct: 233 EMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLF 292

Query: 363 QQMYHHGCKP-NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT--------------- 406
            +M      P N V++TAFL+GLC +GK  +A E   T +E   +               
Sbjct: 293 LEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIES 352

Query: 407 -------------------PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
                              P++ T   V+  L + G++  A  ++  M+K+G+ P     
Sbjct: 353 GRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATH 412

Query: 448 NLLIQSLCREGKMDGAKKFMQ-----------------ECLNKGCAV------------- 477
           ++LI  LC+  K+  A++F+Q                   LN  C               
Sbjct: 413 SMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTM 472

Query: 478 --------NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
                   +VV+++ LI GFC+  +L  A  L   M      P+  TY   ++ L + GR
Sbjct: 473 VSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGR 532

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYN 586
           + +A  +  +M++ G  P V+TY T+IH +    + +   +L E M+S+  CR     YN
Sbjct: 533 IADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR-GCRPNAVTYN 591

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            ++  LC     +EA ++  K++      D  T   L+  + N G    A +V   M ++
Sbjct: 592 CLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSK 651

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
              PD+     + +     GK  EA  L    V R   +P +  H
Sbjct: 652 GHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSR-QCKPDTVSH 695



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 175/375 (46%), Gaps = 40/375 (10%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           L +L ++ K  Q  A+  +   ER              +  D + Y ++++   K     
Sbjct: 453 LNSLCKAKKVHQAFAIFSTMVSER-------------SFVPDVVSYSILIDGFCKIDELG 499

Query: 159 GAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
            A+++ + M    + C P   +Y   +    R G++ +A  V   M  A  +P+++  +T
Sbjct: 500 RAEKLYKQMI--DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYST 557

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            IH   +  K  +A    E M   G  PN +TYNCL+ G C   +  +A +L  +M  +G
Sbjct: 558 LIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 617

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV---NDSNL---------FHDQGRIEEAK 324
           C PD+V+Y T++   C   +I++  ++ ++MV   +D ++         F   G+  EAK
Sbjct: 618 CDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAK 677

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH-HGCKPNTVSYTAFLNG 383
           +L   M    C PD V++  +++G  +   LD A ++ ++M   HGC P+ V+Y + + G
Sbjct: 678 QLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFG 737

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           LC   +  EA ++    +    +P+   ++V++  ++        C +V +   +  F  
Sbjct: 738 LCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIK--------CGIVYQFEIR--FKD 787

Query: 444 PVEINLLIQSLCREG 458
           P   N+L++++   G
Sbjct: 788 PPAFNVLMEAMHAAG 802


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 234/516 (45%), Gaps = 25/516 (4%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI       + L+ ++    +L  A  VL+ + K    PN+   NT I  L V  K
Sbjct: 94  MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 153

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + + L   ++M   G  PNV+TY  LI G C +     AI+L+  M    C PD V Y +
Sbjct: 154 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 213

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LCK++++ +  +L  +M++                        G  P + TY +++
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQ-----------------------GISPSIFTYNSLI 250

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C + E      +L +M +    PN V ++  ++ LC  GK +EA ++++   +    
Sbjct: 251 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 310

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN +TY+ +M G     ++ EA  V   MV KGF P  V  + LI   C+  +++ A   
Sbjct: 311 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 370

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +E   K    N V +++L+ G C  G L++A++L  +M    + PD V+Y  ++D L K
Sbjct: 371 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 430

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTA 584
           N R++EA  L+  +    + P +  Y  VI   C+ G +E    L   + SK        
Sbjct: 431 NRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 490

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           Y  +I  LC  G L EA K+ G++ R     +  T +++   +L     L   ++   M 
Sbjct: 491 YTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML 550

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
            R    D+     + E L  +G  +    ++  F++
Sbjct: 551 ARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 222/458 (48%), Gaps = 25/458 (5%)

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           +  L    +M   GI PN+ T N LI  +C L R+  A  ++ ++   G  P+  ++ T+
Sbjct: 85  STVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTL 144

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +  LC E +I EV  L +KM+ +                       G  P+VVTY  ++N
Sbjct: 145 IRGLCVEGKIGEVLHLFDKMIGE-----------------------GFQPNVVTYGTLIN 181

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G C+VG    A ++L+ M    C+P+ V YT+ ++ LC + +  +A  + +    +  +P
Sbjct: 182 GLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISP 241

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           +  TY+ ++H L    +      ++ EMV     P  V  + ++ +LC+EGK+  A   +
Sbjct: 242 SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVV 301

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
              + +G   NVV + +L+ G C + +++EA+ + D M      PD V+Y+T+I+   K 
Sbjct: 302 DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 361

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAY 585
            R+E+A  L  +M  K L+P  VTY T++H  C VGR++D + L  +M+++ +     +Y
Sbjct: 362 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 421

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
             +++ LC    L+EA  +L  +  +    D     ++++     G    A  +   + +
Sbjct: 422 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 481

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           + L P++     +   L  +G   EA  L      +G+
Sbjct: 482 KGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 519



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 197/410 (48%), Gaps = 27/410 (6%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGK 191
           Q   + D +VY  +++ L K +    A  +   M  +GI   P  F+Y  L+ A     +
Sbjct: 201 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGIS--PSIFTYNSLIHALCNLCE 258

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
            ++   +L+ M  + + PN++I +T +  L    K+ +A   ++ M   G+ PNV+TYN 
Sbjct: 259 WKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNA 318

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           L+ G+C    + +A+K+ D M  KG +PD VSY T++   CK +RI++   L E+M    
Sbjct: 319 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCR-- 376

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                       KEL         IP+ VTY+ +++G C VG L  A  +  +M   G  
Sbjct: 377 ------------KEL---------IPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 415

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+ VSY   L+ LC N +  EA  ++   E     P+   Y++V+ G+ R G+L  A D+
Sbjct: 416 PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 475

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
              +  KG  P      ++I  LC++G +  A K   E   KG + N   +  + RGF +
Sbjct: 476 FSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLR 535

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
             +    + LL +M       D  T T +++ LS +G  +   +++ + L
Sbjct: 536 NNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 585



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 169/384 (44%), Gaps = 16/384 (4%)

Query: 312 NLFHDQG----RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N FH +      +++A    N+M  M   P +  +T ++    ++        +  QM  
Sbjct: 37  NTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDS 96

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN  +    +N  CH  +   A  ++    +    PN  T++ ++ GL  EGK+ E
Sbjct: 97  FGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGE 156

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
              +  +M+ +GF P  V    LI  LC+ G    A + ++      C  +VV +TS+I 
Sbjct: 157 VLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIID 216

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
             C+   + +A +L  +M      P   TY ++I AL      +  T L+ +M++  ++P
Sbjct: 217 SLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP 276

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            VV + TV+   C+ G+V +   +++ M+ +  +     YN +++  C    ++EA K+ 
Sbjct: 277 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVF 336

Query: 606 GKVLRTASKADASTCHVLVESY-----LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
             ++      D  +   L+  Y     + K + L  ++  CR   + LIP+      +  
Sbjct: 337 DTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL--FEEMCR---KELIPNTVTYSTLMH 391

Query: 661 RLILEGKSEEADTLMLRFVERGHI 684
            L   G+ ++A  L    V RG I
Sbjct: 392 GLCHVGRLQDAIALFHEMVTRGQI 415


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 242/484 (50%), Gaps = 49/484 (10%)

Query: 114 VLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIE 173
            LR  +  R  ++ F +  +   +  DP  + ++L       LC  +  +LR + + G+ 
Sbjct: 175 ALRFPSPHRHFVEQFIFTYKA--FSSDPASFDLLL-------LCLPSAELLRRLRQYGLS 225

Query: 174 CRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC--NTAIHVLVVGNKLAKAL 231
             PE+ + ++   SR   L  A+ +   +      P+  +C  N  +  L+   +L  A 
Sbjct: 226 PSPESCNAVL---SRL-PLDEAIALFREL------PDKNVCSHNILLKALLSAGRLKDAC 275

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
           +  + M      P+V+TY  ++ GYC    +++A+KL+DEM  KG   +   Y +V+  L
Sbjct: 276 QHFDEMS---SPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALL 332

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           C                       ++G++ +A  ++  M+  G   D V +T V++GFC 
Sbjct: 333 C-----------------------NKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCS 369

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            G+L  A+++ ++M   G   + V++TA +NGLC  G+  EA  ++    ++    + +T
Sbjct: 370 KGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVT 429

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+V++ G  + G + EA  V  EMV +   P  V    L   LC++G +  A + + E  
Sbjct: 430 YTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMC 489

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
           NKG  +NV  + SLI G C+ G+LE+A+ ++ +M       D  TYTT+ID L K+G  +
Sbjct: 490 NKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFD 549

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVI 589
            A  ++ +ML KG+ P++ TY  +++ +C  GRVE   KLLE ML K  +     YN ++
Sbjct: 550 RAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLM 609

Query: 590 ENLC 593
           +  C
Sbjct: 610 KQYC 613



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 170/355 (47%), Gaps = 8/355 (2%)

Query: 336 IPD--VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           +PD  V ++  ++      G L  A +   +M      P+ V+Y   ++G C  G+   A
Sbjct: 250 LPDKNVCSHNILLKALLSAGRLKDACQHFDEM---SSPPDVVTYGTMVHGYCVRGELENA 306

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            ++++    +    NA  Y+ V+  L  +G++S+A  V+ +M   G     V    +I  
Sbjct: 307 VKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISG 366

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C +G +  A++  +E   +G A + V  T+LI G C+ G+L+EA  +L +M     D D
Sbjct: 367 FCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVD 426

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VTYT +ID   K G + EA  +  +M+ + + P VVTY  +    C+ G V    +LL 
Sbjct: 427 VVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLH 486

Query: 574 KMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +M +K  +     YN +I  LC FG LE+A +I+ ++     + D  T   L+++    G
Sbjct: 487 EMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSG 546

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
               A+ +   M ++ + P +     +     + G+ E    L+   +E+ +++P
Sbjct: 547 EFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEK-NVRP 600



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 125/260 (48%), Gaps = 9/260 (3%)

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L EA  + RE+  K         N+L+++L   G++  A +   E        +VV + +
Sbjct: 240 LDEAIALFRELPDKNV----CSHNILLKALLSAGRLKDACQHFDE---MSSPPDVVTYGT 292

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           ++ G+C +G+LE A+ LLD+M     + +   YT++I  L   G+V +A  ++  M   G
Sbjct: 293 MVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHG 352

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAG 602
           +    V + TVI  +C  G +    +L E+M  +     R  +  +I  LC  G L+EA 
Sbjct: 353 VALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEAD 412

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           ++L +++      D  T  VL++ Y  +G  + A++V   M  R + P++     +S+ L
Sbjct: 413 RVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGL 472

Query: 663 ILEGKSEEADTLMLRFVERG 682
             +G    A+ L+     +G
Sbjct: 473 CKQGDVRAANELLHEMCNKG 492



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 153/361 (42%), Gaps = 44/361 (12%)

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           + EL+ ++ Q G  P   +  AV++       LD+A  + +++       N  S+   L 
Sbjct: 212 SAELLRRLRQYGLSPSPESCNAVLSRL----PLDEAIALFREL----PDKNVCSHNILLK 263

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
            L   G+  +A +     +E    P+ +TY  ++HG    G+L  A  ++ EM  KG   
Sbjct: 264 ALLSAGRLKDACQHF---DEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLES 320

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
                  +I  LC +G++  A + +++    G A++ V FT++I GFC KGDL  A  L 
Sbjct: 321 NATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLF 380

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           ++M       D VT+T +I+ L + G ++EA  ++ +M+ KGL   VVTY  +I  YC  
Sbjct: 381 EEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYC-- 438

Query: 563 GRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
                                            G + EA ++  +++      +  T   
Sbjct: 439 -------------------------------KRGNMVEAFRVHNEMVGRRVAPNVVTYTA 467

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L +    +G    A ++   M N+ L  ++     +   L   G  E+A  +M      G
Sbjct: 468 LSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAG 527

Query: 683 H 683
           H
Sbjct: 528 H 528



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 122/296 (41%), Gaps = 23/296 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  + + L K    + A  +L  M  +G+E     ++ L+    + G L  AM +++ 
Sbjct: 463 VTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTE 522

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+ A    ++    T I  L    +  +A   L+ M   GI P++ TYN L+ G+C   R
Sbjct: 523 MEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGR 582

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           ++   KL++ M  K   P+ V+Y ++M   C +K +K   ++ + M       H Q    
Sbjct: 583 VEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGM-------HSQE--- 632

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
                          P+  TY  ++ G C+   + +A    Q+M   G +    SY+A +
Sbjct: 633 -------------VAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALI 679

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
             L    K  EAR   +    E  T     YS  M     E  L     +  E+V+
Sbjct: 680 RLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVE 735


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 211/445 (47%), Gaps = 29/445 (6%)

Query: 170 RGIECRPEA----FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
           R +  RP      F+ L+   ++  +    + +   MQ   + P L  CN  +H + + +
Sbjct: 73  RMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSS 132

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           +  +A  FL +M   G  P+++T+  L+ GYC  +RI+DAI L D++   G  P+ V+Y 
Sbjct: 133 QPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT 192

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
           T++  LCK + +                         A EL NQM   G  P+VVTY A+
Sbjct: 193 TLIRCLCKNRHL-----------------------NHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           V G C +G    A  +L+ M     +PN +++TA ++     GK +EA+E+ N   +   
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+  TY  +++GL   G L EA  +   M + G +P  V    LI   C+  +++   K
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
              E   KG   N + +T LI+G+C  G  + A  + + M   +  PD  TY  ++D L 
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
            NG+VE+A  +   M  + +   +VTY  +I   C++G+VED   L   + SK  +    
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469

Query: 584 AYNQVIENLCSFGYLEEAGKILGKV 608
            Y  +I   C  G + EA  +  K+
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKM 494



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 183/387 (47%), Gaps = 23/387 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M + G E     F+ L+  Y    ++ +A+ +   +      PN++   T I  L     
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L  A+    +M   G  PNV+TYN L+ G C++ R  DA  L+ +M  +   P+ +++  
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++                       + F   G++ EAKEL N M QM   PDV TY +++
Sbjct: 264 LI-----------------------DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           NG C  G LD+A++M   M  +GC PN V YT  ++G C + +  +  ++     ++   
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            N ITY+V++ G    G+   A +V  +M  +   P     N+L+  LC  GK++ A   
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +    +   +N+V +T +I+G C+ G +E+A  L   ++     P+ +TYTT+I    +
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYR 553
            G + EA  L  KM   G +P    Y+
Sbjct: 481 RGLIHEADSLFKKMKEDGFLPNESVYK 507



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 212/467 (45%), Gaps = 35/467 (7%)

Query: 178 AFSYLMVAYSRAGK-LRNAMY---------VLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
            F + + A+S   K LRN ++         + + M  +   P+++     + V+   N+ 
Sbjct: 40  GFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRY 99

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
              +   E+MQ+ GI P + T N ++   C   +   A   + +M   G  PD V++ ++
Sbjct: 100 DVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSL 159

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +   C                          RIE+A  L +Q+  MG  P+VVTYT ++ 
Sbjct: 160 LNGYCH-----------------------WNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
             C+   L+ A ++  QM  +G +PN V+Y A + GLC  G+  +A  ++    +    P
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           N IT++ ++    + GKL EA ++   M++   +P       LI  LC  G +D A++  
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
                 GC  N V +T+LI GFC+   +E+ + +  +M       +T+TYT +I      
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK--CRTAY 585
           GR + A E+  +M S+   P + TY  ++   C  G+VE  L + E M  ++       Y
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
             +I+ +C  G +E+A  +   +     K +  T   ++  +  +G+
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 215/465 (46%), Gaps = 33/465 (7%)

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           AL    RM  +   P+++ +  L+     ++R    I L ++M + G  P   +   VM 
Sbjct: 67  ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            +C   +                          A   + +M ++G  PD+VT+T+++NG+
Sbjct: 127 CVCLSSQPCR-----------------------ASCFLGKMMKLGFEPDLVTFTSLLNGY 163

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C    ++ A  +  Q+   G KPN V+YT  +  LC N     A E+ N        PN 
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           +TY+ ++ GL   G+  +A  ++R+M+K+   P  +    LI +  + GK+  AK+    
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD---PDTVTYTTIIDALSK 526
            +      +V  + SLI G C  G L+EA  +    YL +++   P+ V YTT+I    K
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF---YLMERNGCYPNEVIYTTLIHGFCK 340

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK---CRT 583
           + RVE+  ++  +M  KG+V   +TY  +I  YC VGR +   ++  +M S++     RT
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRT 400

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            YN +++ LC  G +E+A  I   + +     +  T  ++++     G    A+ + C +
Sbjct: 401 -YNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           F++ + P++     +       G   EAD+L  +  E G +  +S
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNES 504



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 149/335 (44%), Gaps = 27/335 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           ++ + + Y  ++  L K +    A  +   M   G   RP   +Y  L+      G+  +
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG--SRPNVVTYNALVTGLCEIGRWGD 241

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A ++L  M K  + PN++     I   V   KL +A      M    + P+V TY  LI 
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G C    + +A ++   M   GC P++V Y T++   CK K                   
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK------------------- 342

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
               R+E+  ++  +MSQ G + + +TYT ++ G+C VG  D A+++  QM      P+ 
Sbjct: 343 ----RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +Y   L+GLC NGK  +A  +     +     N +TY++++ G+ + GK+ +A D+   
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCS 458

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           +  KG  P  +    +I   CR G +  A    ++
Sbjct: 459 LFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 171/356 (48%), Gaps = 4/356 (1%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           +  +A +L  +M     +P ++ +T +++   ++   D    + +QM   G  P   +  
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++ +C + +   A   +    +  + P+ +T++ +++G     ++ +A  +  +++  
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           GF P  V    LI+ LC+   ++ A +   +    G   NVV + +L+ G C+ G   +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             LL DM   + +P+ +T+T +IDA  K G++ EA EL   M+   + P V TY ++I+ 
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302

Query: 559 YCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
            C  G +++  ++   ++ +  C      Y  +I   C    +E+  KI  ++ +    A
Sbjct: 303 LCMYGLLDEARQMF-YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           +  T  VL++ Y   G P +A +V  +M +R   PD++    + + L   GK E+A
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 126/293 (43%), Gaps = 35/293 (11%)

Query: 130 WADRQW--------RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           W D  W        R   + I +  +++   K      AK +  +M +  +   P+ F+Y
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY--PDVFTY 296

Query: 182 --LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
             L+      G L  A  +  +M++    PN +I  T IH      ++   ++    M  
Sbjct: 297 GSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQ 356

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
            G+  N +TY  LI+GYC + R   A ++ ++M  +   PD  +Y  ++  LC       
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC------ 410

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                             G++E+A  +   M +     ++VTYT ++ G C++G+++ A 
Sbjct: 411 -----------------NGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
            +   ++  G KPN ++YT  ++G C  G   EA  +    +E+ + PN   Y
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 1/190 (0%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A Q FY  +R   Y ++ ++Y  ++    K+K  +   ++   M+++G+      ++ L+
Sbjct: 312 ARQMFYLMERNGCYPNE-VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             Y   G+   A  V + M      P++   N  +  L    K+ KAL   E M+   + 
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
            N++TY  +I+G C L +++DA  L   +  KG  P+ ++Y T++   C+   I E   L
Sbjct: 431 INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSL 490

Query: 304 MEKMVNDSNL 313
            +KM  D  L
Sbjct: 491 FKKMKEDGFL 500


>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 647

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 264/569 (46%), Gaps = 29/569 (5%)

Query: 76  PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRS---QADERVALQFFYWAD 132
           P V ++  L++  S     L+      L  L P  +  +LRS   Q    VA++FF WA 
Sbjct: 76  PWVNQILALLDGSSNMESNLDTFCHMFLIKLSPSFVSFILRSTELQTKPDVAIRFFTWAG 135

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +Q +Y H+   Y  ++++L+   +    K V       G+     + + L+ ++   G +
Sbjct: 136 KQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMV 195

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
              ++V   M++  + P+L   N  ++ LV    +  A R  E M+   I P+V+TYN +
Sbjct: 196 EEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTM 255

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           IKGYC++ + + A + +  M L+  +PDK++Y T++                        
Sbjct: 256 IKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLI-----------------------Q 292

Query: 313 LFHDQGRIEEAKELVNQMSQMGC-IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
             + +G  +    L ++M + G  IP  V Y+ V+ G C+ G+  +   + + M   GCK
Sbjct: 293 ACYAEGDFDSCLGLYHEMDEKGLEIPPHV-YSLVIGGLCKDGKRVEGYTVFENMISKGCK 351

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            N   YTA ++     G   EA  +    ++E   P+ +TY V+++ L + G+L EA + 
Sbjct: 352 ANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEY 411

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           +     KG     +  + LI  L + G++D A++   E + KGC  +   + +LI    +
Sbjct: 412 MEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAK 471

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G ++EAL+L   M +   D    TYT +I  L +  R EEA  L   M+ KG+ PT   
Sbjct: 472 CGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAA 531

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKC-RTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           +R +    C  G+V    K+L++M        TA++ +I  LC  G ++EA K+   ++ 
Sbjct: 532 FRALSTGLCLSGKVARACKILDEMAPMGVIPETAFDDMINILCKAGRIKEACKLADGIVD 591

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKV 639
              +       VL+ +    G   LA K+
Sbjct: 592 RGREIPGRVRTVLINALRKAGNADLALKL 620



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 191/417 (45%), Gaps = 15/417 (3%)

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL--FHDQ 317
           H ++  + LID +   G      S ++         + KE+  +M    ++S +  F + 
Sbjct: 142 HNLECYVSLIDVLATNGVLDSVKSVFS---------KFKEMGLIMTVYSSNSLIKSFGNL 192

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G +EE   +  +M + G  P + +Y  +VNG      ++ A+++ + M +    P+ V+Y
Sbjct: 193 GMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTY 252

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              + G C  GK+ +A E +   E     P+ ITY  ++     EG       +  EM +
Sbjct: 253 NTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDE 312

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG    P   +L+I  LC++GK        +  ++KGC  NV  +T+LI    + G++ E
Sbjct: 313 KGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGE 372

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A+ L   M     +PD VTY  I+++L K+GR++EA E M     KG+    + Y ++I 
Sbjct: 373 AMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLID 432

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
              + GRV++  ++  +M+ K+ C      YN +I+ L   G ++EA  +  ++      
Sbjct: 433 GLGKSGRVDEAERIFYEMV-KKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCD 491

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
               T  +L+     +     A  +   M ++ + P     + +S  L L GK   A
Sbjct: 492 QTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARA 548


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 147/575 (25%), Positives = 265/575 (46%), Gaps = 40/575 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y MM+    +      A RV   M   GI      ++ ++    + G++     VL
Sbjct: 323 DEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVL 382

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+   + P+    NT I        + KA      M   G+    LTYN L+KG+C L
Sbjct: 383 QEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSL 442

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---------VRDLMEKMVND 310
           H I DA++L   M  +G +P+++S  T++  L K  + ++          R L + ++  
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITF 502

Query: 311 SNLFHDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           + + +     GR+ EA+EL+++M ++ C PD +TY  + +G+C++G+L  A  ++ +M H
Sbjct: 503 NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEH 562

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+   + +F+ G     +  +  ++ +       +PN +TY  ++ G  +EG L E
Sbjct: 563 LGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHE 622

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN----KGCAVNVVN-- 481
           AC++  EMV  G  P     + L+    +EGK+D A   +Q+ +N     GC+++ +   
Sbjct: 623 ACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEID 682

Query: 482 --------------------FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
                               +  +I G C+ G + +A SL + +   +  PD  TY+++I
Sbjct: 683 KISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLI 742

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
              + +G ++EA  L   MLS GL P ++TY ++I+  C+ G++   + L  K+ SK   
Sbjct: 743 HGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGIS 802

Query: 582 RTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                YN +I+  C  G   EA K+  K++    +    T  +L+     +G    A K+
Sbjct: 803 PNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKL 862

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
             +M   N+ P+      +    I  G  EE   L
Sbjct: 863 LDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKL 897



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 245/545 (44%), Gaps = 59/545 (10%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D   Y  +++   +    + A  + R+M R G+      ++ L+  +     + +A+ 
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +  +M K  VAPN + C+T +  L    K  +AL   +     G+  NV+T+N +I G C
Sbjct: 451 LWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLC 510

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
            + R+ +A +L+D M    C PD ++Y T+    CK                        
Sbjct: 511 KIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCK-----------------------L 547

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G++  A  L+N+M  +G  P V  + + + G     +  +   +  +M   G  PN V+Y
Sbjct: 548 GQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTY 607

Query: 378 TAFLNGLCHNGKSLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            A + G C  G   EA     EM+N        PN    S +M    +EGK+ EA  V++
Sbjct: 608 GALIAGWCKEGNLHEACNLYFEMVNNG----MNPNVFICSALMSCFYKEGKVDEANLVLQ 663

Query: 434 EMVKKGFFP----TPVEI----------------------NLLIQSLCREGKMDGAKKFM 467
           ++V     P    + +EI                      N++I  LC+ G++  AK   
Sbjct: 664 KLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLF 723

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
           +   NK    +   ++SLI G    G ++EA SL D M      P+ +TY ++I  L K+
Sbjct: 724 ESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKS 783

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAY 585
           G++  A  L  K+ SKG+ P  +TY T+I  YC+ G+  +  KL +KM+ +  Q     Y
Sbjct: 784 GKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITY 843

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           + +I  LC+ GY+EEA K+L +++      +  T   L+  Y+  G      K+   M  
Sbjct: 844 SILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHI 903

Query: 646 RNLIP 650
           R L+P
Sbjct: 904 RGLLP 908



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 272/603 (45%), Gaps = 33/603 (5%)

Query: 106 LKPRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           L P  + A LR  + D   AL  F  A      R   + +  +L IL++ +    A+ +L
Sbjct: 68  LTPALLQAALRRVRLDPDAALHLFRLAPS----RPSLVSHAQLLHILARARRFHDARALL 123

Query: 165 RLMARRGIECRPE-------------AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNL 211
             +        P              +F  L+ A++ AG+L +A+ V   M K    P+L
Sbjct: 124 SSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSL 183

Query: 212 LICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
             CN  ++ LV       A     +M++AG+ P+  T   + K YC   R+  A++ ++E
Sbjct: 184 RSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEE 243

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGR 319
           M   G   + V+Y+ VM   C     ++ R ++E +                  +   GR
Sbjct: 244 MEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGR 303

Query: 320 IEEAKELVNQMSQMG-CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           +EEA+ +V +M + G  + D V Y  ++NG+C+ G +D A ++  +M   G   N   Y 
Sbjct: 304 MEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYN 363

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             +NGLC  G+  E ++++   E+    P+  +Y+ ++ G  REG + +A ++ R MV+ 
Sbjct: 364 TMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRN 423

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G   T +  N L++  C    +D A +     L +G A N ++ ++L+ G  + G  E+A
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQA 483

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L+L  +        + +T+ T+I+ L K GR+ EA EL+ +M      P  +TYRT+   
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543

Query: 559 YCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           YC++G++     L+ KM  L        +N  I          +   I  ++       +
Sbjct: 544 YCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPN 603

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
             T   L+  +  +G    A  +   M N  + P++ +C  +      EGK +EA+ ++ 
Sbjct: 604 LVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQ 663

Query: 677 RFV 679
           + V
Sbjct: 664 KLV 666



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 218/480 (45%), Gaps = 73/480 (15%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +L+          A R+  LM +RG+     + S L+    +AGK   A+ +   
Sbjct: 430 LTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKE 489

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
                +A N++  NT I+ L    ++A+A   L+RM+     P+ LTY  L  GYC L +
Sbjct: 490 TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQ 549

Query: 262 IKDAIKLID-----------------------------------EMPLKGCSPDKVSYYT 286
           +  A  L++                                   EM  +G SP+ V+Y  
Sbjct: 550 LGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGA 609

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMG 334
           ++   CKE  + E  +L  +MVN+             + F+ +G+++EA  ++ ++  + 
Sbjct: 610 LIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNID 669

Query: 335 CIPDV--------------------------VTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
            IP                            V +  ++ G C+ G +  AK + + + + 
Sbjct: 670 MIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNK 729

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
              P+  +Y++ ++G   +G   EA  + +       TPN ITY+ +++GL + GKLS A
Sbjct: 730 RFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRA 789

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            ++  ++  KG  P  +  N LI   C+EGK   A K  Q+ + +G    V+ ++ LI G
Sbjct: 790 VNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYG 849

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C +G +EEA+ LLD M     DP+ +TY T+I    K+G +EE ++L  +M  +GL+PT
Sbjct: 850 LCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 909



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 85/175 (48%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R  R+  D   Y  ++   + +     A  +  +M   G+      ++ L+    ++GKL
Sbjct: 727 RNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKL 786

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A+ + + +Q   ++PN +  NT I       K  +A +  ++M   GI P V+TY+ L
Sbjct: 787 SRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSIL 846

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           I G C    +++AIKL+D+M      P+ ++Y T++    K   ++E+  L ++M
Sbjct: 847 IYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEM 901


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 144/564 (25%), Positives = 267/564 (47%), Gaps = 70/564 (12%)

Query: 120 DERVALQFFYWADRQW-RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
           + RV L  + + D    R   +   + +++ +L  +   + A+ +   M  RG E     
Sbjct: 125 ENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFT 184

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F  L+  Y RAG     + +L  M+   + PN ++ NT I       K   A + +++M+
Sbjct: 185 FGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMR 244

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP----LKGCSPDKVSYYTVMGYLCKE 294
             G+ P+V T+N  I   C   +I +A ++  +M     L    P+ ++Y  ++   CKE
Sbjct: 245 EDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKE 304

Query: 295 KRIKEVRDLMEKMVNDSNLFH------------DQGRIEEAKELVNQMSQMGCIPDVVTY 342
             ++E + L++ M  ++N  +              G++ EA  ++ +M  +G  PD+ +Y
Sbjct: 305 GMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSY 364

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             V++G C+ G L  A+ ++  M  +G  P+TV+Y+  L+G C  GK  EA  +++    
Sbjct: 365 NIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMIS 424

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
              +PN  T +V++H L +EG++SEA +++++M +KG+    V  N++I +LC  G++D 
Sbjct: 425 NNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDK 484

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK-DPDTVTYTTII 521
           A + +      G A       +L   F         + L+DD    KK  PD VTY+TII
Sbjct: 485 AIEIVNGMWTHGSAA----LGNLGNSF---------IGLVDDTISGKKCTPDLVTYSTII 531

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
             L K GR+++A +  ++M+SKGL P    Y T IH +C+ G++    ++L+ M  K+ C
Sbjct: 532 SGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDM-EKRGC 590

Query: 582 RT--------------------------------------AYNQVIENLCSFGYLEEAGK 603
                                                    YN ++  LC  G + +A  
Sbjct: 591 NKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPS 650

Query: 604 ILGKVLRTASKADASTCHVLVESY 627
           +L ++L+     + S+  +L++++
Sbjct: 651 VLDEMLQKGISPNISSFRILIKAF 674



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 235/513 (45%), Gaps = 40/513 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y +ML    K  + + AK ++  M R       E+++  ++   R GKL  A  VL  
Sbjct: 292 ITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKE 351

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + P++   N  +  L     L+ A   +  M   GI P+ +TY+ L+ GYC   +
Sbjct: 352 MLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGK 411

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
           + +A  L+ EM    CSP+  +   ++  L KE RI E  +L++KM              
Sbjct: 412 VFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNI 471

Query: 312 --NLFHDQGRIEEAKELVNQMSQMG-----------------------CIPDVVTYTAVV 346
             N   + G++++A E+VN M   G                       C PD+VTY+ ++
Sbjct: 472 IINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTII 531

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C+ G LD AKK   +M   G +P++  Y  F++  C  GK   A +++   E+    
Sbjct: 532 SGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCN 591

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
               TY+ ++ GL  + ++ E   ++ EM +KG  P     N ++  LC  G+++ A   
Sbjct: 592 KTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSV 651

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD-DMYLCKKDPDTVTYTTIIDALS 525
           + E L KG + N+ +F  LI+ FC+  D + +  + +  + +C        YT + + L 
Sbjct: 652 LDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGH--KEALYTLMFNELL 709

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
             G+V EA EL    L +        Y+ +I R C+  ++E    +L +++ K  Q    
Sbjct: 710 VGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPA 769

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           ++  VI+     G    A ++  +++  AS+++
Sbjct: 770 SFMPVIDGFGKMGNKHVADELAERMMEMASESN 802



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 232/475 (48%), Gaps = 47/475 (9%)

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           P++ + N  +   +  N++       + M LA ++P   T+N LI   CD   ++DA +L
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFHD-------- 316
            D+MP +GC P++ ++  ++   C+     +  +L+ +M    +  +N+ ++        
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM-------YHHG 369
           +G+  +A++LV++M + G +P V T+ + ++  C  G++ +A ++ + M         H 
Sbjct: 230 EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH- 288

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PN ++Y   L G C  G   EA+ +++T +      N  +Y++ + GL R GKL EA 
Sbjct: 289 --PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAW 346

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            V++EM+  G  P     N+++  LC+ G +  A+  M   +  G   + V +++L+ G+
Sbjct: 347 IVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGY 406

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C KG + EA +LL +M      P+T T   ++ +L K GR+ EA  L+ KM  KG     
Sbjct: 407 CSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDT 466

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKM----------------------LSKQKCR---TA 584
           VT   +I+  C  G+++  ++++  M                      +S +KC      
Sbjct: 467 VTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVT 526

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
           Y+ +I  LC  G L++A K   +++    + D++     + S+  +G    A++V
Sbjct: 527 YSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQV 581



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 165/371 (44%), Gaps = 37/371 (9%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           + R+E    L   M      P+  T+  ++   C  G L+ A+++  +M   GC+PN  +
Sbjct: 125 ENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFT 184

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           +   + G C  G + +  E++         PN + Y+ ++    +EGK  +A  +V +M 
Sbjct: 185 FGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMR 244

Query: 437 KKGFFPTPVEINLLIQSLCREGK-MDGAKKFMQECLNKGCAV---NVVNFTSLIRGFCQK 492
           + G  P     N  I +LC  GK ++ ++ F    +++   +   NV+ +  ++ GFC++
Sbjct: 245 EDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKE 304

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G LEEA +L+D M       +  +Y   +  L +NG++ EA  ++ +ML  G+ P + +Y
Sbjct: 305 GMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSY 364

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
                                            N V++ LC  G L +A  ++G ++R  
Sbjct: 365 ---------------------------------NIVMDGLCKNGMLSDARMLMGLMIRNG 391

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
              D  T   L+  Y +KG    A  +   M + N  P+   C  +   L  EG+  EA+
Sbjct: 392 ILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAE 451

Query: 673 TLMLRFVERGH 683
            L+ +  E+G+
Sbjct: 452 NLLQKMNEKGY 462



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 11/268 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++  L K      AK+    M  +G++     +   + ++ R GK+ +A  VL
Sbjct: 523 DLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVL 582

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+K      L   N+ I  L   N++ +    ++ M+  G++P+V TYN ++   C+ 
Sbjct: 583 KDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEG 642

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN------- 312
            RI DA  ++DEM  KG SP+  S+  ++   CK    K   ++ E  +N          
Sbjct: 643 GRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYT 702

Query: 313 -LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
            +F++    G++ EAKEL               Y  +++  C+  +L+ A  +L ++   
Sbjct: 703 LMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDK 762

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           G + +  S+   ++G    G    A E+
Sbjct: 763 GYQFDPASFMPVIDGFGKMGNKHVADEL 790


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 234/463 (50%), Gaps = 25/463 (5%)

Query: 166 LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
           L+  +G     E  + ++  + +  + + A  + + M +  +  +L   N  I+VL    
Sbjct: 171 LIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEG 230

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           KL KA  F+  M+  G+ PNV+TYN +I G+C   + + A  +   M  KG  PD  +Y 
Sbjct: 231 KLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYN 290

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
           + +  LCKE                       GR+EEA  L+ +M + G +P+ VTY A+
Sbjct: 291 SFISGLCKE-----------------------GRLEEASGLICKMLEGGLVPNAVTYNAL 327

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G+C  G+LD+A     +M   G   + V+Y  F++ L   G+  +A  MI    E+  
Sbjct: 328 IDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGM 387

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+A+T++++++G  R G    A  ++ EMV KG  PT V    LI  L +  +M  A  
Sbjct: 388 MPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADA 447

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
              +   +G   +++ F +LI G C  G+++ A  LL +M   K  PD +TY T++    
Sbjct: 448 LFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYC 507

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-- 583
           + G+VEEA +L+ +M  +G+ P  ++Y T+I  Y + G ++D  ++ ++M++     T  
Sbjct: 508 REGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTIL 567

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            YN +I+ LC     E A ++L +++      D ST   ++E+
Sbjct: 568 TYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEA 610



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/530 (26%), Positives = 252/530 (47%), Gaps = 33/530 (6%)

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN--------- 245
            +++LS +Q    + +L   + AI VL        ++  ++R+ L+    N         
Sbjct: 77  VLHLLSHLQNHPHSLDLATSSLAICVLYRLPSPKPSINLIQRLILSPTCTNRTIFDELAL 136

Query: 246 ---------VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
                     L ++ L++ YC+L +  +A++    +  KG  P+  +   ++    K  R
Sbjct: 137 ARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNR 196

Query: 297 IKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            +    L  +M   +            N+   +G++++AKE +  M  +G  P+VVTY  
Sbjct: 197 TQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNT 256

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++G C  G+  +A+ + Q M   G +P+  +Y +F++GLC  G+  EA  +I    E  
Sbjct: 257 IIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGG 316

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             PNA+TY+ ++ G   +G L +A     EM+ KG   + V  NL I +L  EG+M  A 
Sbjct: 317 LVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDAD 376

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             ++E   KG   + V    LI G+C+ GD + A  LLD+M      P  VTYT++I  L
Sbjct: 377 NMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVL 436

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--R 582
            K  R++EA  L  K+  +GL+P ++ +  +I  +C  G ++   +LL++M + +     
Sbjct: 437 GKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDE 496

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             YN +++  C  G +EEA ++L ++ R   K D  + + L+  Y  +G    A++V   
Sbjct: 497 ITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDE 556

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
           M      P +     + + L    + E A+ L+   V +G I P    +L
Sbjct: 557 MMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKG-ITPDDSTYL 605



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 214/422 (50%), Gaps = 12/422 (2%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           ML +  K    Q A  +   M R  I      F+ ++    + GKL+ A   +  M+   
Sbjct: 187 MLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLG 246

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           V PN++  NT IH   +  K  +A    + M+  G+ P+  TYN  I G C   R+++A 
Sbjct: 247 VKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEAS 306

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NLFHD-- 316
            LI +M   G  P+ V+Y  ++   C +  + +     ++M++          NLF    
Sbjct: 307 GLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHAL 366

Query: 317 --QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             +GR+ +A  ++ +M + G +PD VT+  ++NG+CR G+  +A  +L +M   G +P  
Sbjct: 367 FMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTL 426

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+YT+ +  L    +  EA  + +  ++E   P+ I ++ ++ G    G +  A  +++E
Sbjct: 427 VTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKE 486

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M      P  +  N L+Q  CREGK++ A++ + E   +G   + +++ +LI G+ ++GD
Sbjct: 487 MDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGD 546

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           +++A  + D+M     DP  +TY  +I  L KN   E A EL+ +M+SKG+ P   TY +
Sbjct: 547 MKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLS 606

Query: 555 VI 556
           +I
Sbjct: 607 II 608



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 167/341 (48%), Gaps = 32/341 (9%)

Query: 165 RLMARRGIECR-------PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           RL    G+ C+       P A +Y  L+  Y   G L  A      M    +  +L+  N
Sbjct: 301 RLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYN 360

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             IH L +  ++  A   ++ M+  G+ P+ +T+N LI GYC     K A  L+DEM  K
Sbjct: 361 LFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGK 420

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
           G  P  V+Y +++  L K  R+KE                       A  L +++ Q G 
Sbjct: 421 GIQPTLVTYTSLIYVLGKRNRMKE-----------------------ADALFSKIQQEGL 457

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           +PD++ + A+++G C  G +D+A ++L++M +    P+ ++Y   + G C  GK  EAR+
Sbjct: 458 LPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQ 517

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +++  +     P+ I+Y+ ++ G  + G + +A  V  EM+  GF PT +  N LIQ LC
Sbjct: 518 LLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLC 577

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +  + + A++ ++E ++KG   +   + S+I       DLE
Sbjct: 578 KNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 238/507 (46%), Gaps = 33/507 (6%)

Query: 137 YRHDP-----IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRA 189
           YRH P       Y  ++  L +    + A+R L LM R G   RP+AF++  L++ Y R 
Sbjct: 120 YRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGW--RPDAFTFNSLILGYCRT 177

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
            +L  A  +   M     + + +     I       ++ +AL     M      P++ T+
Sbjct: 178 QQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTH 233

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             L+KG CD  R ++ + ++ +M   G  P   +Y  ++   C+E++ +E   ++ +M +
Sbjct: 234 AALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFD 293

Query: 310 DS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                         N +  +GR+  A  +   M   GC P+V TY A+V GFC  G++ +
Sbjct: 294 SGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYK 353

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  +L QM   G +P+ V+Y   + G C +G    A  ++   E      +  TY+V++ 
Sbjct: 354 AMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLID 413

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
            L + GK+ EAC +   +  +G  P  V  N +I  LC+ GK D A  F++  ++ G A 
Sbjct: 414 ALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAP 473

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +   ++  I   C+    +E L  +D+M      P TV YT +I+ L        AT + 
Sbjct: 474 DTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIW 533

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-----AYNQVIENL 592
            +M+S+G  P VVTY T +  YC  GR+++   ++ +M   +KCRT     AYN +I+  
Sbjct: 534 GQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEM---KKCRTIVDAMAYNTLIDGH 590

Query: 593 CSFGYLEEAGKILGKVLRTASKADAST 619
            S G  + A  IL  +   AS  +  T
Sbjct: 591 TSIGQTDRAVTILKHMTGVASMPNHFT 617



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/528 (22%), Positives = 233/528 (44%), Gaps = 43/528 (8%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           +L+ M   G      A++ L+  + R  K   A  +L+ M  + + P ++ C   ++   
Sbjct: 252 MLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYC 311

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              +++ A+R  E M+  G  PNV TYN +++G+C+  ++  A+ L+D+M   G  PD V
Sbjct: 312 REGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVV 371

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           +Y  ++   C +                       G I  A  L+  M   G   D  TY
Sbjct: 372 TYNLLIRGQCID-----------------------GHIGSAFRLLRLMEGNGLAADQYTY 408

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             +++  C+ G++D+A  +   + + G +PN+V++   +NGLC  GK   A   +     
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMIS 468

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
             + P+  TYS  +  L +     E    + EM++K   P+ V   ++I  L  E     
Sbjct: 469 AGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGL 528

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A +   + +++GC+ +VV +T+ +R +C +G L+EA +++ +M  C+   D + Y T+ID
Sbjct: 529 ATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLID 588

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTY-------------------RTVIHRYCQVG 563
             +  G+ + A  ++  M     +P   T+                    T + +  ++ 
Sbjct: 589 GHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELA 648

Query: 564 RVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
            V +L +L++K       RT Y  ++E       L+E   ++  +       +    + L
Sbjct: 649 DVFELFELMKKNSVPSSART-YLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNAL 707

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           V  +    +   A+ + C M     +P+L   + +   L  EG+++ A
Sbjct: 708 VNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRA 755



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/424 (21%), Positives = 175/424 (41%), Gaps = 34/424 (8%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+LRLM   G+      ++ L+ A  + GK+  A  +   ++   + PN +  NT I+
Sbjct: 389 AFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVIN 448

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    K   A  FLE M  AG  P+  TY+  I+  C     ++ +  IDEM  K   P
Sbjct: 449 GLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKP 508

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
             V+Y  V+  L  E+       +  +MV+                + ++GR++EA+ +V
Sbjct: 509 STVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVV 568

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL------ 381
            +M +   I D + Y  +++G   +G+ D+A  +L+ M      PN   +T F+      
Sbjct: 569 TEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPN--HFTFFILLRHLL 626

Query: 382 ------------NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
                         +    +  +  E+    ++     +A TY  ++ G   E +L E  
Sbjct: 627 QRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVT 686

Query: 430 DVVREMVKKGFFPTPVEI-NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            +V  ++K+   P   +I N L+   C+      A   +   +  G   N++ +  L+ G
Sbjct: 687 SLV-SLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSG 745

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
              +G  + A  +       + + D + +  IID   + G  +   +++  +      P+
Sbjct: 746 LTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPS 805

Query: 549 VVTY 552
             TY
Sbjct: 806 DETY 809



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 7/247 (2%)

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           PT    N LI++LCR   +  A++++   +  G   +   F SLI G+C+   LE A  L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
              M       D V+Y  +I+   + GR++EA EL  +M      P + T+  ++   C 
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCD 242

Query: 562 VGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            GR E+ L +L+KM  L  +    AY  +++  C     EEA KIL ++  +       T
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
           C ++V +Y  +G    A +V   M  +   P++     + +     GK  +A  L+ +  
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362

Query: 680 ERGHIQP 686
           E G ++P
Sbjct: 363 ECG-VEP 368



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/327 (21%), Positives = 137/327 (41%), Gaps = 34/327 (10%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN-- 194
           Y  D   Y   +E L KTK  Q     +  M ++ +  +P   +Y +V  +R    RN  
Sbjct: 471 YAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDV--KPSTVNYTIVI-NRLFNERNYG 527

Query: 195 -AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  +   M     +P+++   T++       +L +A   +  M+      + + YN LI
Sbjct: 528 LATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLI 587

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY----------------LCKEKRI 297
            G+  + +   A+ ++  M      P+  +++ ++ +                + K   +
Sbjct: 588 DGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIEL 647

Query: 298 KEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            +V +L E M  +S              F ++ R++E   LV+ M +     +   Y A+
Sbjct: 648 ADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNAL 707

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           VN FC++     A  +L  M  HG  PN + Y   L+GL   G++  A+E+  +S  + +
Sbjct: 708 VNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEY 767

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVV 432
             + I + V++ G  R+G      D++
Sbjct: 768 NTDEIVWKVIIDGFIRKGHADMCHDMI 794


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 257/551 (46%), Gaps = 40/551 (7%)

Query: 92  SPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEIL 151
            P L  +L     ++ P     VL+   D  VA  FF WA  +  ++H+     ++L   
Sbjct: 27  GPYLCRDLAGYASTVTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAF 86

Query: 152 SKTKLCQGAKRVLRLMARRGIE--CRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAV 207
            K K  + A R+L    +  +E  C P    Y  V   + +AG++  A  +L  M++  V
Sbjct: 87  VKAKRHEEAHRLL----KEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGV 142

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
             ++L+ +T I  L    ++ +AL   + M     +PNV+TYN ++ G C  +RI +A++
Sbjct: 143 KMDVLLHSTLIQGLCRKGRIDEALEQFKSMG-EECSPNVITYNTVVNGLCKANRIDEALE 201

Query: 268 LIDEMPLK-----GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
           L D+M  +     GC PD +SY TV+  LCK +                       R+++
Sbjct: 202 LFDDMEKRYEASHGCEPDVISYSTVIDALCKAQ-----------------------RVDK 238

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A E   +M  +GC P+VVTY+++++G C+V    +  ++L  M   G   N + + A L+
Sbjct: 239 AYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLH 298

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
            L  N +  +A +      +    PN +TY+V +HGL + G++ EA  ++ EMV+    P
Sbjct: 299 ALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTP 358

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             +  + +I   C+ G+MD A       +   C  + V F +L+ GF +     EA  + 
Sbjct: 359 DVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVH 418

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           +DM      P   TY  ++D +     VE A E+  KM  K   P   TY  +I   C+ 
Sbjct: 419 EDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRA 478

Query: 563 GRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
            RV++  + L+ M +          + ++E LC  G ++EA  +L  V+    +    T 
Sbjct: 479 RRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETF 538

Query: 621 HVLVES-YLNK 630
            +LVE  YL K
Sbjct: 539 KILVEELYLRK 549



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 236/478 (49%), Gaps = 29/478 (6%)

Query: 237 MQLAGITP----NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
            Q AG  P    N  T   L+  +    R ++A +L+ E     C P+++ Y TV+   C
Sbjct: 63  FQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFC 122

Query: 293 KEKRIKEVRDLMEKM----VNDSNLFHD--------QGRIEEAKELVNQMSQMG--CIPD 338
           K  ++ +  +L+++M    V    L H         +GRI+EA E   Q   MG  C P+
Sbjct: 123 KAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALE---QFKSMGEECSPN 179

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQM-----YHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           V+TY  VVNG C+   +D+A ++   M       HGC+P+ +SY+  ++ LC   +  +A
Sbjct: 180 VITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKA 239

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            E           PN +TYS ++ GL +  + SE  +++  M +KGF    ++ N ++ +
Sbjct: 240 YEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHA 299

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           L +  + + A +F +  L  G   NVV +   + G C+ G ++EA  +L +M   K  PD
Sbjct: 300 LWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPD 359

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            +TY++IID   K GR+++A ++  +M+    +P  VT+ T++H + +  +  +  ++ E
Sbjct: 360 VITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHE 419

Query: 574 KMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            M++         YN +++ +C    +E A +I  K+ R   + D +T   L++      
Sbjct: 420 DMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRAR 479

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
               A +    M   N++P+  +C  + E L  +G+ +EA +++   VE G  QP  E
Sbjct: 480 RVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVG-CQPLGE 536



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/472 (23%), Positives = 217/472 (45%), Gaps = 23/472 (4%)

Query: 124 ALQFFYWADRQWRYRH----DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF 179
           AL+ F   ++++   H    D I Y  +++ L K +    A    + M  R + C P   
Sbjct: 199 ALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRM--RAVGCAPNVV 256

Query: 180 SY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +Y  L+    +  +    + +L  M++     N++  N  +H L   ++  KA +F ER+
Sbjct: 257 TYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 316

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
             +G  PNV+TYN  + G C   R+ +A +++ EM     +PD ++Y +++   CK  R+
Sbjct: 317 LKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 376

Query: 298 KEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            +  D+  +M+    +            F +  +  EA  +   M   G IP + TY  +
Sbjct: 377 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 436

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++  C    ++ A ++  +M     +P+  +Y   +  LC   +  EA+E ++  E +  
Sbjct: 437 MDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNV 496

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            PN      ++  L ++G++ EAC V+  +V+ G  P      +L++ L    K + A K
Sbjct: 497 VPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASK 556

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            ++   + G   +   ++  +   C+ G  +EA+ +++ M L    PD  TY  ++ +L 
Sbjct: 557 LLR---SPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLC 613

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
              RVE A     KM S+G  P +VTY  +I   C     ++  ++ E M++
Sbjct: 614 GLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVA 665



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 181/431 (41%), Gaps = 44/431 (10%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++ L K         +L  M  +G       F+ ++ A  +  +   A      
Sbjct: 256 VTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFER 315

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           + K+   PN++  N A+H L    ++ +A R L  M  + +TP+V+TY+ +I G+C   R
Sbjct: 316 LLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGR 375

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NL 313
           +  A  +   M +  C P  V++ T++    + K+ +E   + E MVN          N+
Sbjct: 376 MDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNV 435

Query: 314 FHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             D       +E A E+ ++M +    PD  TY  ++   CR   +D+AK+ L  M    
Sbjct: 436 LMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADN 495

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE---------------------EW---- 404
             PN     A +  LC  G+  EA  +++   E                     +W    
Sbjct: 496 VVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAAS 555

Query: 405 -------WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
                  +  +A TYS+ +  + + GK  EA +V+ +MV KG  P       +++SLC  
Sbjct: 556 KLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGL 615

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
            +++ A    ++  ++GCA  +V +T LI   C     +EA  + + M      P   T 
Sbjct: 616 DRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTM 675

Query: 518 TTIIDALSKNG 528
            T+   L   G
Sbjct: 676 RTLSSCLRDAG 686



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/384 (22%), Positives = 152/384 (39%), Gaps = 49/384 (12%)

Query: 124 ALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           A QFF   +R  +    P  + Y + +  L K      A R+L  M    +      +S 
Sbjct: 309 ACQFF---ERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSS 365

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           ++  + +AG++  A  V + M      P+ +   T +H      K  +A R  E M  AG
Sbjct: 366 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 425

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             P + TYN L+   C    ++ A+++  +M  K   PD  +Y  ++  LC+ +R+ E +
Sbjct: 426 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAK 485

Query: 302 DLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIP------------ 337
           + ++ M  D+             +   QG ++EA  +++ + ++GC P            
Sbjct: 486 EFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL 545

Query: 338 --------------------DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
                               D  TY+  V   C+ G+ D+A ++++QM   G +P+  +Y
Sbjct: 546 YLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTY 605

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
            A L  LC   +   A             P  +TY++++          EA  +   MV 
Sbjct: 606 VAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVA 665

Query: 438 KGFFPTPVEINLLIQSLCREGKMD 461
            GF P    +  L   L   G  D
Sbjct: 666 AGFTPQAQTMRTLSSCLRDAGYQD 689


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 243/508 (47%), Gaps = 22/508 (4%)

Query: 137 YRHDP---IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           + H P   + +  +L  ++KTK       +   M   GI       + L+ ++    +L 
Sbjct: 62  HMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLG 121

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  VL+ + K    P+     T I  L V  K+  AL   ++M   G  PNV+TY  LI
Sbjct: 122 FAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLI 181

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND--- 310
            G C +     AI+L+  M    C PD V Y +++  LCK++++ E  +L  KMV     
Sbjct: 182 NGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGIS 241

Query: 311 ------SNLFHDQGRIEEAKE---LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                 ++L H    + E K    L+NQM     +PDVV ++ VV+  C+ G++ +A  +
Sbjct: 242 PDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDV 301

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           +  M   G +PN V+Y A ++G C   +  EA ++ +T     + PN I+Y+ +++G  +
Sbjct: 302 VDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCK 361

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
             ++ +A  +  EM +K   P  V  N L+   C  G++  A     E +  G   ++  
Sbjct: 362 IQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLAT 420

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +  L+   C+K  L+EA++LL  +     DPD   YT +ID + + G +E A ++   + 
Sbjct: 421 YRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLS 480

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----LSKQKCRTAYNQVIENLCSFGY 597
           SKGL P V TY  +I+  C+ G +++  KL  +M     S   C   YN + + L     
Sbjct: 481 SKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGC--TYNTITQGLLQNKE 538

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVE 625
              A ++L ++L     AD ST  +LVE
Sbjct: 539 ALRAIQLLQEMLARGFSADVSTTTLLVE 566



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 221/450 (49%), Gaps = 26/450 (5%)

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
            +M   GI P+V T N LI  +C L+R+  A  ++ ++   G  PD  ++ T++  LC E
Sbjct: 93  NQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVE 152

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
            +I +   L +KM+ +                       G  P+VVTY  ++NG C+VG 
Sbjct: 153 GKIGDALHLFDKMIGE-----------------------GFQPNVVTYGTLINGLCKVGN 189

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
            + A ++L+ M    C+P+ V YT+ ++ LC + +  EA  + +    +  +P+  TY+ 
Sbjct: 190 TNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTS 249

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++H L    +      ++ +M+     P  V  + ++ +LC+EGK+  A   +   + +G
Sbjct: 250 LIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRG 309

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              NVV + +L+ G C + +++EA+ + D M      P+ ++Y T+I+   K  R+++AT
Sbjct: 310 VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKAT 369

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENL 592
            L  +M  K L+P  VTY T++H  C VGR++D + L  +M++  +      Y  +++ L
Sbjct: 370 YLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYL 428

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C   +L+EA  +L  +  +    D     ++++     G    A  +   + ++ L P++
Sbjct: 429 CKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNV 488

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +    +   L   G  +EA+ L +     G
Sbjct: 489 RTYTIMINGLCRRGLLDEANKLFMEMDGNG 518



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 186/393 (47%), Gaps = 28/393 (7%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG--K 191
           Q   + D +VY  +++ L K +    A  +   M  +GI   P+ F+Y  + +S     +
Sbjct: 202 QGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGIS--PDIFTYTSLIHSLCNLCE 259

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
            ++   +L+ M  + + P+++I +T +  L    K+ +A   ++ M + G+ PNV+TYN 
Sbjct: 260 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 319

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           L+ G+C    + +A+K+ D M   G +P+ +SY T++   CK +R+ +   L E+M    
Sbjct: 320 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQ-- 377

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                       KEL         IP+ VTY  +++  C VG L  A  +  +M  HG  
Sbjct: 378 ------------KEL---------IPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQI 415

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+  +Y   L+ LC      EA  ++ T E     P+   Y++V+ G+ R G+L  A D+
Sbjct: 416 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 475

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
              +  KG  P      ++I  LCR G +D A K   E    GC+ +   + ++ +G  Q
Sbjct: 476 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 535

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             +   A+ LL +M       D  T T +++ L
Sbjct: 536 NKEALRAIQLLQEMLARGFSADVSTTTLLVEML 568



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 180/371 (48%), Gaps = 18/371 (4%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L NQM   G  PDV T   ++N FC +  L  A  +L ++   G +P+T ++T  + GL
Sbjct: 90  SLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGL 149

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  GK  +A  + +    E + PN +TY  +++GL + G  + A  ++R M +    P  
Sbjct: 150 CVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDV 209

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V    +I SLC++ ++  A     + + +G + ++  +TSLI   C   + +   +LL+ 
Sbjct: 210 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQ 269

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M   K  PD V ++T++DAL K G++ EA +++  M+ +G+ P VVTY  ++  +C    
Sbjct: 270 MINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSE 329

Query: 565 VEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST--- 619
           +++ +K+ + M+         +YN +I   C    +++A  +  ++ +     +  T   
Sbjct: 330 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNT 389

Query: 620 ----CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
               CHV     L   I L    VA        IPDL   + + + L  +   +EA  L 
Sbjct: 390 LMHXCHV---GRLQDAIALFHEMVA-----HGQIPDLATYRILLDYLCKKSHLDEAMAL- 440

Query: 676 LRFVERGHIQP 686
           L+ +E  ++ P
Sbjct: 441 LKTIEGSNMDP 451



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 2/275 (0%)

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           LD A     +M H    P+TV +   L  +    +      + N  +     P+  T ++
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           +++      +L  A  V+ +++K G  P       LI+ LC EGK+  A     + + +G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              NVV + +LI G C+ G+   A+ LL  M      PD V YT+IID+L K+ +V EA 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENL 592
            L  KM+ +G+ P + TY ++IH  C +   + +  LL +M++ +       ++ V++ L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           C  G + EA  ++  ++    + +  T + L++ +
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 324



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 76/169 (44%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++L+ L K      A  +L+ +    ++   + ++ ++    RAG+L  A  + 
Sbjct: 417 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 476

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S +    + PN+      I+ L     L +A +    M   G +P+  TYN + +G    
Sbjct: 477 SNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN 536

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
                AI+L+ EM  +G S D  +   ++  LC +K  + V+ ++ + V
Sbjct: 537 KEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFV 585


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 242/506 (47%), Gaps = 25/506 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS L+ A ++  K    +     M+   V+ NL   N  I+ L   ++L+ AL  L +M 
Sbjct: 68  FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+++T N L+ G+C  +RI +A+ L+D+M   G  PD V++ T++  L +  +  
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
           E   L+E+MV                         GC PD+VTY AV+NG C+ GE D A
Sbjct: 188 EAVALVERMV-----------------------VKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L +M     + + V Y+  ++ LC      +A  +    + +   P+  TYS ++  
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L   G+ S+A  ++ +M+++   P  V  N LI +  +EGK+  A+K   E + +    N
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +V + SLI GFC    L+EA  +   M      PD VTY T+I+   K  +V +  EL  
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
            M  +GLV   VTY T+IH + Q    ++   + ++M+S         YN +++ LC  G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            LE+A  +   + ++  + D  T +++ E     G     + + C +  + + PD+    
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524

Query: 657 KVSERLILEGKSEEADTLMLRFVERG 682
            +      +G  EEA TL ++  E G
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDG 550



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 238/484 (49%), Gaps = 27/484 (5%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G+      ++ ++    R  +L  A+ +L  M K    P+++  N+ ++    GN++++A
Sbjct: 95  GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           +  +++M   G  P+ +T+  L+ G    ++  +A+ L++ M +KGC PD V+Y  V+  
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LCK        +L+ KM        ++G+IE                DVV Y+ V++  C
Sbjct: 215 LCKRGEPDLALNLLNKM--------EKGKIE---------------ADVVIYSTVIDSLC 251

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +   +D A  +  +M + G +P+  +Y++ ++ LC+ G+  +A  +++   E    PN +
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           T++ ++    +EGKL EA  +  EM+++   P  V  N LI   C   ++D A++     
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           ++K C  +VV + +LI GFC+   + + + L  DM       +TVTYTT+I    +    
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQ 587
           + A  +  +M+S G+ P ++TY T++   C+ G++E  + + E  L K K       YN 
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE-YLQKSKMEPDIYTYNI 490

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           + E +C  G +E+   +   +     K D    + ++  +  KG+   AY +  +M    
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550

Query: 648 LIPD 651
            +PD
Sbjct: 551 PLPD 554



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 243/507 (47%), Gaps = 15/507 (2%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           H+   Y +M+  L +      A  +L  M + G        + L+  +    ++  A+ +
Sbjct: 98  HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +  M +    P+ +   T +H L   NK ++A+  +ERM + G  P+++TY  +I G C 
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-------- 310
                 A+ L+++M       D V Y TV+  LCK + + +  +L  +M N         
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277

Query: 311 -SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            S+L     + GR  +A  L++ M +    P+VVT+ ++++ F + G+L +A+K+  +M 
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                PN V+Y + +NG C + +  EA+++      +   P+ +TY+ +++G  +  K+ 
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +  ++ R+M ++G     V    LI    +    D A+   ++ ++ G   N++ + +L+
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C+ G LE+A+ + + +   K +PD  TY  + + + K G+VE+  +L   +  KG+ 
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKI 604
           P V+ Y T+I  +C+ G  E+   L  KM           YN +I      G    + ++
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577

Query: 605 LGKVLRTASKADASTCHVLVESYLNKG 631
           + ++       DAST + LV   L+ G
Sbjct: 578 IKEMRSCRFAGDAST-YGLVTDMLHDG 603



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 208/450 (46%), Gaps = 30/450 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           Y+ D + +  ++  L +      A  ++  M  +G  C+P+  +Y  V     + G+   
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG--CQPDLVTYGAVINGLCKRGEPDL 223

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +L+ M+K  +  +++I +T I  L     +  AL     M   GI P+V TY+ LI 
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
             C+  R  DA +L+ +M  +  +P+ V++ +++    KE                    
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE-------------------- 323

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G++ EA++L ++M Q    P++VTY +++NGFC    LD+A+++   M    C P+ 
Sbjct: 324 ---GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y   +NG C   K ++  E+           N +TY+ ++HG  +      A  V ++
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MV  G  P  +  N L+  LC+ GK++ A    +         ++  +  +  G C+ G 
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           +E+   L   + L    PD + Y T+I    K G  EEA  L +KM   G +P   TY T
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTA 584
           +I  + + G      +L+++M S   CR A
Sbjct: 561 LIRAHLRDGDKAASAELIKEMRS---CRFA 587



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 166/357 (46%), Gaps = 16/357 (4%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           AL  F   D +   R D   Y  ++  L        A R+L  M  R I      F+ L+
Sbjct: 259 ALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
            A+++ GKL  A  +   M + ++ PN++  N+ I+   + ++L +A +    M      
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+V+TYN LI G+C   ++ D ++L  +M  +G   + V+Y T++    +       + +
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437

Query: 304 MEKMVNDS--------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
            ++MV+D         N   D     G++E+A  +   + +    PD+ TY  +  G C+
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            G+++    +   +   G KP+ ++Y   ++G C  G   EA  +    +E+   P++ T
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
           Y+ ++    R+G  + + ++++EM +   F        L+  +  +G++D  K F++
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEM-RSCRFAGDASTYGLVTDMLHDGRLD--KGFLE 611


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 141/562 (25%), Positives = 260/562 (46%), Gaps = 15/562 (2%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++ L K +    A+ V + M  RG++     ++ ++    +A  +  A  V   
Sbjct: 296 VTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQ 355

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    V P+ L     I  L     + +A    ++M   G+ PN  TYNCLI GY    +
Sbjct: 356 MIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQ 415

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
            ++ ++ I EM      PD  +Y  ++ YLCK  +  E R L + M+             
Sbjct: 416 WEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGI 475

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             + +  +G + E  +L+N M   G  P+   +  V+  + +   +D+   +  +M   G
Sbjct: 476 MLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG 535

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PN V+Y   ++ LC  G+  +A    N    E  TPN + ++ +++GL    K  +  
Sbjct: 536 LSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVE 595

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           ++  EM+ +G  P  V  N ++ +LC+EG++  A++ +   +  G   +V+++ +LI G 
Sbjct: 596 ELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGH 655

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C    ++EA+ LLD M      P+ V+Y T++    K GR++ A  L  +ML KG+ P V
Sbjct: 656 CFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGV 715

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGK 607
            TY T+++   + GR  +  +L   M+  +K  +   Y+ +++  C     +EA KI   
Sbjct: 716 ETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQS 775

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +     + D  T +++++     G    A  +   +    L+P +   + ++E LI EG 
Sbjct: 776 LCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGS 835

Query: 668 SEEADTLMLRFVERGHIQPKSE 689
            EE D L    +E+    P S 
Sbjct: 836 LEELDCL-FSVMEKSGTAPNSH 856



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 241/512 (47%), Gaps = 31/512 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++L+ L K   C  A+ +   M R+GI+     +  ++  Y + G L     +L
Sbjct: 434 DVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLL 493

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           ++M    ++PN  I NT I        + + +    +M+  G++PNV+TY  LI   C L
Sbjct: 494 NLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKL 553

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R+ DA+   ++M  +G +P+ V + +++  LC   + ++V +L  +M+N          
Sbjct: 554 GRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQ--------- 604

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                         G  PD+V +  V+   C+ G + +A++++  M   G KP+ +SY  
Sbjct: 605 --------------GIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNT 650

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G C   +  EA ++++        PN ++Y+ ++HG  + G++  A  + REM++KG
Sbjct: 651 LIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKG 710

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     N ++  L R G+   A++     +      ++  ++ ++ GFC+    +EA 
Sbjct: 711 VTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAF 770

Query: 500 SLLDDMYLCKKDP--DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
            +     LC  D   D +T+  +ID L K GR E+A +L   + + GLVP+VVTYR +  
Sbjct: 771 KIFQS--LCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAE 828

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKA 615
              + G +E+L  L   M        ++  N +I  L   G +  AG  L K+       
Sbjct: 829 NLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSL 888

Query: 616 DASTCHVLVESYLNKGIPLLAYKVA--CRMFN 645
           +AST  +L+  +  +     A  +   CR FN
Sbjct: 889 EASTTSMLISLFSREEYQQHAKSLPEKCRFFN 920



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/591 (24%), Positives = 270/591 (45%), Gaps = 55/591 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMAR-RGIECRPEAFSYLMV--AYSRAGKLRNAMYV 198
           + Y  +L+ L   +  + A+ +L +M   +   C P+  SY +V   +   G++  A   
Sbjct: 156 VSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKA--- 212

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
            S+  +  V+P+++  NT I  L    ++ +A    ++M   G+ PN +TYN +I G C 
Sbjct: 213 YSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCK 272

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
              +  A  +  +M  KG  P  V+Y T++  LCK + +     + ++M++         
Sbjct: 273 AQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVT 332

Query: 312 -NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            N   D       I++A+ +  QM   G  PD +TYT +++G C+   +D+A+ + QQM 
Sbjct: 333 YNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMI 392

Query: 367 HHGCKPNTVSYTAFLNG-----------------------------------LCHNGKSL 391
             G KPN  +Y   ++G                                   LC NGK  
Sbjct: 393 DKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCN 452

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           EAR + ++   +   P+   Y +++HG  ++G LSE  D++  MV  G  P     N +I
Sbjct: 453 EARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVI 512

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
            +  +   +D       +   +G + NVV + +LI   C+ G +++A+   + M      
Sbjct: 513 CAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVT 572

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P+ V + +++  L    + E+  EL ++ML++G+ P +V + TV+   C+ GRV +  +L
Sbjct: 573 PNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRL 632

Query: 572 LEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
           ++ M  +  +    +YN +I+  C    ++EA K+L  ++    K +  + + L+  Y  
Sbjct: 633 IDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCK 692

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
            G    AY +   M  + + P ++    +   L   G+  EA  L +  ++
Sbjct: 693 AGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIK 743



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 258/562 (45%), Gaps = 24/562 (4%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECR----PEAFSYLMV--AYSRAGKLRNAMYVLS 200
           +L ++S+ K    +K  +    R   +C     P+  +Y +V   + R G+L        
Sbjct: 49  LLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFG 108

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER-MQLAGITPNVLTYNCLIKGYCDL 259
           ++ K     + ++ N  +  L    ++ +A+  L R M   G    V++YN L+KG CD 
Sbjct: 109 LILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDR 168

Query: 260 HRIKDAIKLIDEMPLKG----CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VND 310
            R ++A +L+  M + G    CSPD VSY  V+     E ++ +   L  +M     V  
Sbjct: 169 RRAEEARELL-HMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVSPDVVT 227

Query: 311 SNLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            N   D       ++ A+++  QM + G  P+ VTY  +++G C+  E+D A+ + Q+M 
Sbjct: 228 YNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMV 287

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G KP+ V+Y   ++GLC       A  +     +    P+ +TY+ ++ GL +   + 
Sbjct: 288 DKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAID 347

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A  V ++M+ KG  P  +   ++I  LC+   +D A+   Q+ ++KG   N   +  LI
Sbjct: 348 KAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLI 407

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G+   G  EE +  + +M     +PD  TY  ++D L KNG+  EA  L   M+ KG+ 
Sbjct: 408 HGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIK 467

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKI 604
           P+V  Y  ++H Y + G + ++  LL  M++         +N VI        ++E   I
Sbjct: 468 PSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHI 527

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
             K+ +     +  T   L+++    G    A     +M N  + P+  +   +   L  
Sbjct: 528 FIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCT 587

Query: 665 EGKSEEADTLMLRFVERGHIQP 686
             K E+ + L L  + +G I+P
Sbjct: 588 VDKWEKVEELFLEMLNQG-IRP 608



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 16/299 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           R D + +  +L  L K      A+R++  M   G+  +P+  SY  L+  +  A ++  A
Sbjct: 607 RPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGL--KPDVISYNTLIDGHCFASRMDEA 664

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + +L  M  A + PN++  NT +H      ++  A      M   G+TP V TYN ++ G
Sbjct: 665 VKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNG 724

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-------- 307
                R  +A +L   M          +Y  ++   CK     E   + + +        
Sbjct: 725 LFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLD 784

Query: 308 VNDSNLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
           +   N+  D     GR E+A +L   +   G +P VVTY  +       G L++   +  
Sbjct: 785 IITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFS 844

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            M   G  PN+    A +  L   G+   A   ++  +E+ ++  A T S+++    RE
Sbjct: 845 VMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSRE 903


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 153/583 (26%), Positives = 261/583 (44%), Gaps = 63/583 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMAR-RGIECRPEAFSYLMV--AYSRAGKLRNAM 196
           D   Y  +L+ L      Q A  +L +MA  RG    P+  SY  V   + + G    A 
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAY 221

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
                M    + P+++  ++ I  L     + KA+  L  M   G+ P+ +TYN ++ GY
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 281

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   + K+AI  + +M   G  P+ V+Y ++M YLCK                       
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK----------------------- 318

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            GR  EA+++ + M++ G  PD+ TY  ++ G+   G L +   +L  M  +G +P+   
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           +   +       K  +A  + +   +    PN + Y  V+  L + G + +A     +M+
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            +G  P  +    LI  LC   K D A++ + E L++G  +N + F S+I   C++G + 
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 498

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           E+  L D M      PD +TY T+ID     G+++EAT+L+  M+S G+ P +VTY T+I
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558

Query: 557 HRYCQVGRVEDLLKLLEKMLSK-----------------QKCRTA--------------- 584
           + YC+V R++D L L ++M+S                     RTA               
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 618

Query: 585 -----YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                YN ++  LC     +EA ++   +  T  + +  T ++++ + L  G    A  +
Sbjct: 619 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL 678

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                   L+PD++    ++E LI +G  EE D L L   E G
Sbjct: 679 FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 153/611 (25%), Positives = 255/611 (41%), Gaps = 93/611 (15%)

Query: 101 NLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGA 160
           NLL+ L     C   RSQ  E + L      DR      D + Y  +L    K      A
Sbjct: 168 NLLKGL-----CDENRSQ--EALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKA 220

Query: 161 KRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
                 M  RGI      +S ++ A  +A  +  AM VL+ M K  V P+ +  N+ +H 
Sbjct: 221 YSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 280

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
                +  +A+  L++M+  G+ PNV+TY+ L+   C   R  +A K+ D M  +G  PD
Sbjct: 281 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFH-------DQGRIEEAKELVN 328
             +Y T++     +  + E+  L++ MV      D ++F+        Q ++++A  + +
Sbjct: 341 IATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFS 400

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL---- 384
           +M Q G  P+VV Y  V++  C+ G +D A    +QM   G  PN + YT+ ++GL    
Sbjct: 401 KMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCD 460

Query: 385 -------------------------------CHNGKSLEAREMINTSEEEWWTPNAITYS 413
                                          C  G+ +E+ ++ +        P+ ITY+
Sbjct: 461 KWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYN 520

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++ G    GK+ EA  ++  MV  G  P  V    LI   CR  +MD A    +E ++ 
Sbjct: 521 TLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 580

Query: 474 GCAVNVVNFTSLIRGF-----------------------------------CQKGDLEEA 498
           G + N++ +  +++G                                    C+    +EA
Sbjct: 581 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L +  ++ L     +T T+  +I AL K GR++EA +L     + GLVP V TY  +   
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
             + G +E+L  L   M  +  C       N ++  L   G +  AG  L  +       
Sbjct: 701 LIEQGSLEELDDLFLSM-EENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSL 759

Query: 616 DASTCHVLVES 626
           +AST   L+ES
Sbjct: 760 EASTASFLLES 770



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 177/399 (44%), Gaps = 44/399 (11%)

Query: 328 NQMSQMGC---IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           N+M++ G     P V TY  ++   CR G LD     L  +   G + + +++T  L GL
Sbjct: 78  NRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGL 137

Query: 385 CHNGKSLEAREMI--------------------------NTSEEEW-------------W 405
           C + ++ +A +++                          N S+E                
Sbjct: 138 CADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGS 197

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+ ++Y+ V++G  +EG   +A     EM+ +G  P  V  + +I +LC+   MD A +
Sbjct: 198 PPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAME 257

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            +   +  G   + + + S++ G+C  G  +EA+  L  M     +P+ VTY+++++ L 
Sbjct: 258 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLC 317

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
           KNGR  EA ++   M  +GL P + TYRT++  Y   G + ++  LL+ M+    Q    
Sbjct: 318 KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHH 377

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            +N +I        +++A  +  K+ +     +      +++     G    A     +M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +  L P++ +   +   L    K ++A+ L+L  ++RG
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 265/521 (50%), Gaps = 16/521 (3%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           + S L+  Y +  K   A  VL++M K   A N+   N  +  L    +  KA+  L  M
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           +   + P+V +YN +I+G+C+   ++ A++L +EM   GCS   V++  ++   CK  ++
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228

Query: 298 KEVRDLMEKM---------VNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            E    +++M         V  ++L   F D G ++  K L +++ + G  P  +TY  +
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           + GFC++G+L +A ++ + M   G +PN  +YT  ++GLC  GK+ EA +++N   E+  
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            PNA+TY+++++ L ++G +++A ++V  M K+   P  +  N+L+  LC +G +D A K
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408

Query: 466 FMQECLNKGCAV--NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            +   L        +V+++ +LI G C++  L +AL + D +       D VT   ++++
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKC 581
             K G V +A EL  ++    +V    TY  +I  +C+ G +     LL KM     Q  
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS 528

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              YN ++ +LC  G L++A ++  ++ R  +  D  + +++++  L  G    A  +  
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            M    L PDL    K+  R +  G  +EA +   + V+ G
Sbjct: 589 GMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 141/557 (25%), Positives = 258/557 (46%), Gaps = 36/557 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           Y H+     ++L+ L +   C  A  +LR M R  +   P+ FSY  V   +    +L  
Sbjct: 143 YNHN-----ILLKGLCRNLECGKAVSLLREMRRNSL--MPDVFSYNTVIRGFCEGKELEK 195

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ + + M+ +  + +L+     I       K+ +A+ FL+ M+  G+  +++ Y  LI+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G+CD   +     L DE+  +G SP  ++Y T++   CK                     
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK--------------------- 294

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G+++EA E+   M + G  P+V TYT +++G C VG+  +A ++L  M     +PN 
Sbjct: 295 --LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y   +N LC +G   +A E++   ++    P+ ITY++++ GL  +G L EA  ++  
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412

Query: 435 MVKKGFFPTP--VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           M+K   +  P  +  N LI  LC+E ++  A       + K  A + V    L+    + 
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           GD+ +A+ L   +   K   ++ TYT +ID   K G +  A  L+ KM    L P+V  Y
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLR 610
             ++   C+ G ++   +L E+M          ++N +I+     G ++ A  +L  + R
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                D  T   L+  +L  G    A     +M +    PD  +C  V +  I +G++++
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDK 652

Query: 671 ADTLMLRFVERGHIQPK 687
              L+ + V++  +  K
Sbjct: 653 LTELVKKLVDKDIVLDK 669



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 189/413 (45%), Gaps = 16/413 (3%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P A +Y  L+  + + G+L+ A  +   M +  V PN+      I  L    K  +AL+ 
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           L  M      PN +TYN +I   C    + DA+++++ M  +   PD ++Y  ++G LC 
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399

Query: 294 EKRIKEVRDLMEKMVNDSN-----------LFHD---QGRIEEAKELVNQMSQMGCIPDV 339
           +  + E   L+  M+ DS+           L H    + R+ +A ++ + + +     D 
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           VT   ++N   + G++++A ++ +Q+       N+ +YTA ++G C  G    A+ ++  
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
                  P+   Y+ ++  L +EG L +A  +  EM +   FP  V  N++I    + G 
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +  A+  +      G + ++  ++ LI  F + G L+EA+S  D M     +PD     +
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           ++      G  ++ TEL+ K++ K +V       TV+   C      DL K L
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRL 692



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 165/332 (49%), Gaps = 9/332 (2%)

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
           +LM K+V   N  H     E A     +M +     + V+ + ++  + ++ +   A  +
Sbjct: 77  NLMAKLVRSRN--H-----ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGV 129

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L  M   G   N  ++   L GLC N +  +A  ++         P+  +Y+ V+ G   
Sbjct: 130 LALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE 189

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
             +L +A ++  EM   G   + V   +LI + C+ GKMD A  F++E    G   ++V 
Sbjct: 190 GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +TSLIRGFC  G+L+   +L D++      P  +TY T+I    K G+++EA+E+   M+
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLE 599
            +G+ P V TY  +I   C VG+ ++ L+LL  M+ K +   A  YN +I  LC  G + 
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +A +I+  + +  ++ D  T ++L+     KG
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 117/257 (45%), Gaps = 16/257 (6%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           ++ R R D I Y ++L  L        A ++L LM +      P+  SY  L+    +  
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L  A+ +  ++ +   A + +  N  ++  +    + KA+   +++  + I  N  TY 
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYT 498

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            +I G+C    +  A  L+ +M +    P    Y  ++  LCKE  + +   L E+M  D
Sbjct: 499 AMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRD 558

Query: 311 SNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
           +N F D              G I+ A+ L+  MS+ G  PD+ TY+ ++N F ++G LD+
Sbjct: 559 NN-FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617

Query: 358 AKKMLQQMYHHGCKPNT 374
           A     +M   G +P+ 
Sbjct: 618 AISFFDKMVDSGFEPDA 634


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 250/522 (47%), Gaps = 36/522 (6%)

Query: 76  PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLR---SQADERVALQFFYWAD 132
           P++  +   I++ S   P L   L+ +L SL P  +  ++            L FF W  
Sbjct: 37  PILTTISEAIKV-SPTKP-LHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLS 94

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLM-ARRG-----------IECRPE--- 177
            Q  +R     Y  M   L   K+   A+ +L+ + +R+G           +E R     
Sbjct: 95  TQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQS 154

Query: 178 --AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
              FS LM AY+ +G   +A+    +++K  +      C      L+  N  + A  F E
Sbjct: 155 NLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYE 214

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            +   G  P+V  +N L+   C  H+I +A  L  E+  +G  P  VS+ T++   CK  
Sbjct: 215 EILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSG 274

Query: 296 RIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTY 342
            + +   L ++ + ++ +F D             +G++++A +L  +M   G +P+ VT+
Sbjct: 275 NLDQGFRL-KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTF 333

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           T ++NG C  G  D   ++ QQM   G KP+ ++Y   +NGLC  G   EA++++    +
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQ 393

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               P+  TY++++ G  +EG L  A ++ +EMVK+G     V    LI   CREG++  
Sbjct: 394 RGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIE 453

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A++ ++E L  G   +   +T +I GFC+KGD++    LL +M      P  VTY  +++
Sbjct: 454 AERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLN 513

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
            L K G+++ A  L+  ML+ G+VP  +TY  ++ R  Q  +
Sbjct: 514 GLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQAWK 555



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 168/347 (48%), Gaps = 12/347 (3%)

Query: 128 FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS 187
           FY       Y  D   + +++  L K      A+ +   + +RG+     +F+ L+  Y 
Sbjct: 212 FYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYC 271

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           ++G L     +   M +  V P++   +  I+ L    +L  A +    M   G+ PN +
Sbjct: 272 KSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDV 331

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           T+  LI G+C   R    +++  +M  KG  PD ++Y T++  LCK   ++E + L+ +M
Sbjct: 332 TFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEM 391

Query: 308 VNDS--------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                        +  D    +G +E A E+  +M + G   D V +TA+++GFCR G++
Sbjct: 392 TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQV 451

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
            +A++ L++M   G KP+  +YT  ++G C  G      +++   + +   P  +TY+V+
Sbjct: 452 IEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVL 511

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
           ++GL ++G++  A  ++  M+  G  P  +  N+L++   +  K  G
Sbjct: 512 LNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQAWKQGG 558



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/430 (22%), Positives = 188/430 (43%), Gaps = 43/430 (10%)

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           SY T+  +LC  K + E + L++ +V+       +G+   +    + +   G     + +
Sbjct: 105 SYCTMTHFLCTHKMLSEAQSLLQFVVSR------KGKNSASSVFTSVLEARGTHQSNLVF 158

Query: 343 TAVVNGFCRVGELDQA--------KKMLQQMYHH-------------------------- 368
           + ++N +   G    A        K  LQ  +H                           
Sbjct: 159 SVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILD 218

Query: 369 -GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+   +   ++ LC   K  EA+ +     +    P  ++++ +++G  + G L +
Sbjct: 219 CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQ 278

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
              + R M++   FP     ++LI  LC+EG++D A K   E  ++G   N V FT+LI 
Sbjct: 279 GFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLIN 338

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C  G  +  + +   M      PD +TY T+I+ L K G + EA +L+++M  +GL P
Sbjct: 339 GHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
              TY  +I   C+ G +E  L++ ++M+ +  +    A+  +I   C  G + EA + L
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            ++L    K D +T  +++  +  KG     +K+   M     +P +     +   L  +
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518

Query: 666 GKSEEADTLM 675
           G+ + A+ L+
Sbjct: 519 GQMKNANMLL 528


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 149/576 (25%), Positives = 263/576 (45%), Gaps = 23/576 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D   Y ++L+ L        A  +LR+MA  G  C P+  +Y  V   + + G +  A  
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACD 240

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  + P+ +  ++ +H L     + KA  FL +M   G+ PN  TYN LI GY 
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYS 300

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              + K+A+++  EM  +   PD V++  +MG LCK  +IKE RD+ + M          
Sbjct: 301 STGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 N +  +G + +  +L + M   G  P + T+  ++  +   G LD+A  +  +M
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
             HG KPN ++YT  +  LC  GK  +A E  N   ++   P+   Y  ++ G    G L
Sbjct: 421 RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 480

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A +++ E++  G     V  + +I +LC+ G++  A+      +N G     V ++ L
Sbjct: 481 LKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSML 540

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           + G+C  G +E+AL + D M     +P+ V Y T+++   K GR++E   L  +ML KG+
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600

Query: 546 VPTVVTYRTVIHRYCQVGRVED----LLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEA 601
            P+ + Y  +I    + GR         ++ E  ++  KC   Y+ V+  L      +EA
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC--TYSIVLRGLFKNRCFDEA 658

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
             +  ++     K D  T + ++           A  +   +    L+P +     +   
Sbjct: 659 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN 718

Query: 662 LILEGKSEEADTLMLRFVERGHIQPKSE--EHLQRQ 695
           LI EG  EEA+  M   ++    +P S    H+ R+
Sbjct: 719 LIKEGLVEEAED-MFSSMQNAGCEPDSRLLNHVVRE 753



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 188/413 (45%), Gaps = 12/413 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +ML   +          +  LM   GI      F+ L+ AY+  G L  AM + 
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIF 417

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M+   V PN+L   T I  L    K+  A+    +M   G+ P+   Y+CLI+G+C  
Sbjct: 418 NEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTH 477

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
             +  A +LI E+   G   D V + +++  LCK  R+ + +++ +  VN          
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVY 537

Query: 312 NLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           ++  D     G++E+A  + + M   G  P+ V Y  +VNG+C++G +D+   + ++M  
Sbjct: 538 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQ 597

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G KP+T+ Y   ++GL   G+++ A+   +   E     N  TYS+V+ GL +     E
Sbjct: 598 KGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDE 657

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  + +E+         + +N +I  + +  +++ AK         G    VV ++ +I 
Sbjct: 658 AIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMIT 717

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
              ++G +EEA  +   M     +PD+     ++  L K   +  A   + K+
Sbjct: 718 NLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 770



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/438 (22%), Positives = 190/438 (43%), Gaps = 26/438 (5%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           ++P   TY  L+      HR + A+    ++   G   D +    ++   C+ KR  E  
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
           D+                      L+++  ++GC+PDV +Y+ ++   C  G+  QA  +
Sbjct: 167 DI----------------------LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 204

Query: 362 LQQMYHHG--CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           L+ M   G  C P+ V+Y   ++G    G   +A ++     +    P+ +TYS V+H L
Sbjct: 205 LRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHAL 264

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            +   + +A   +R+MV KG  P     N LI      G+   A +  +E   +    +V
Sbjct: 265 CKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDV 324

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           V F  L+   C+ G ++EA  + D M +  ++PD  +Y  +++  +  G + + T+L   
Sbjct: 325 VTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDL 384

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGY 597
           ML  G+ P + T+  +I  Y   G ++  + +  +M     +     Y  VI  LC  G 
Sbjct: 385 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGK 444

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
           +++A +   +++      D    H L++ +   G  L A ++   + N  +  D+ L   
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSS 504

Query: 658 VSERLILEGKSEEADTLM 675
           +   L   G+  +A  + 
Sbjct: 505 IINNLCKLGRVMDAQNIF 522


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/587 (25%), Positives = 263/587 (44%), Gaps = 47/587 (8%)

Query: 122 RVALQFFYWADRQWRYRHDPIVYYMML--EILSKTKLCQGAKRVLR-------------- 165
           ++AL+F  W  +Q     D IV  + +   IL + ++   A+ +L+              
Sbjct: 51  KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFG 110

Query: 166 --LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
             +   R     P  +  L+  Y R G +++++ +  +M      P++  CN  +  +V 
Sbjct: 111 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 170

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
             +      FL+ M    I P+V T+N LI   C     + +  L+ +M   G +P  V+
Sbjct: 171 SGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT 230

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           Y TV+ + CK                       +GR + A EL++ M   G   DV TY 
Sbjct: 231 YNTVLHWYCK-----------------------KGRFKAAIELLDHMKSKGVDADVCTYN 267

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            +++  CR   + +   +L+ M      PN V+Y   +NG  + GK L A +++N     
Sbjct: 268 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 327

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
             +PN +T++ ++ G   EG   EA  +   M  KG  P+ V   +L+  LC+  + D A
Sbjct: 328 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 387

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           + F       G  V  + +T +I G C+ G L+EA+ LL++M     DPD VTY+ +I+ 
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
             K GR + A E++ ++   GL P  + Y T+I+  C++G +++ +++ E M+ +   R 
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507

Query: 584 --AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              +N ++ +LC  G + EA + +  +       +  +   L+  Y N G  L A+ V  
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
            M      P       + + L   G   EA+    +F++  H  P +
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAE----KFLKSLHAVPAA 610



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 209/441 (47%), Gaps = 12/441 (2%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y    + Y  +L    K    + A  +L  M  +G++     ++ L+    R+ ++    
Sbjct: 224 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY 283

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M+K  + PN +  NT I+      K+  A + L  M   G++PN +T+N LI G+
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
                 K+A+K+   M  KG +P +VSY  ++  LCK       R    +M  +      
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  +     G ++EA  L+N+MS+ G  PD+VTY+A++NGFC+VG    AK+++ +
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           +Y  G  PN + Y+  +   C  G   EA  +      E  T +  T++V++  L + GK
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           ++EA + +R M   G  P  V  + LI      G+   A     E    G       + S
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L++G C+ G L EA   L  ++      DTV Y T++ A+ K+G + +A  L  +M+ + 
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643

Query: 545 LVPTVVTYRTVIHRYCQVGRV 565
           ++P   TY ++I   C+ G+ 
Sbjct: 644 ILPDSYTYTSLISGLCRKGKT 664



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/554 (21%), Positives = 233/554 (42%), Gaps = 85/554 (15%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  M++ L K      A  +L  M++ GI+     +S L+  + + G+ + A  ++  
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463

Query: 202 MQKAAVAPNLLICNTAIH-------------------------------VLVV----GNK 226
           + +  ++PN +I +T I+                               VLV       K
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +A+A  F+  M   GI PN ++++CLI GY +      A  + DEM   G  P   +Y +
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583

Query: 287 VMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD-------QGRIEEAKELVNQMSQMG 334
           ++  LCK   ++E    ++ +       D+ +++         G + +A  L  +M Q  
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643

Query: 335 CIPDVVTYTAVVNGFCR------------------------------------VGELDQA 358
            +PD  TYT++++G CR                                     G+    
Sbjct: 644 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 703

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
               +QM + G  P+ V+  A ++G    GK  +  +++     +   PN  TY++++HG
Sbjct: 704 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 763

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
             +   +S +  + R ++  G  P  +  + L+  +C    ++   K ++  + +G  V+
Sbjct: 764 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
              F  LI   C  G++  A  L+  M       D  T   ++  L++N R +E+  ++ 
Sbjct: 824 RYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH 883

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFG 596
           +M  +G+ P    Y  +I+  C+VG ++    + E+M++ + C    A + ++  L   G
Sbjct: 884 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 943

Query: 597 YLEEAGKILGKVLR 610
             +EA  +L  +L+
Sbjct: 944 KADEATLLLRFMLK 957



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/547 (21%), Positives = 227/547 (41%), Gaps = 56/547 (10%)

Query: 137  YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
            +  D   + +++  L K      A+  +R M   GI     +F  L+  Y  +G+   A 
Sbjct: 504  HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 563

Query: 197  YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             V   M K    P      + +  L  G  L +A +FL+ +       + + YN L+   
Sbjct: 564  SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623

Query: 257  CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
            C    +  A+ L  EM  +   PD  +Y +++  LC++ +        ++     N+  +
Sbjct: 624  CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683

Query: 317  Q-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            +             G+ +       QM  +G  PD+VT  A+++G+ R+G++++   +L 
Sbjct: 684  KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 743

Query: 364  QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            +M +    PN  +Y   L+G         +  +  +       P+ +T   ++ G+    
Sbjct: 744  EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 803

Query: 424  KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA------- 476
             L     +++  + +G        N+LI   C  G+++ A   ++   + G +       
Sbjct: 804  MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 863

Query: 477  --VNVVN--------------------------FTSLIRGFCQKGDLEEALSLLDDMYLC 508
              V+V+N                          +  LI G C+ GD++ A  + ++M   
Sbjct: 864  AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923

Query: 509  KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
            K  P  V  + ++ AL+K G+ +EAT L+  ML   LVPT+ ++ T++H  C+ G V + 
Sbjct: 924  KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 983

Query: 569  LKLLEKMLSKQKCR-----TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
            L+L   M     C       +YN +I  LC+ G +  A ++  ++      A+A+T   L
Sbjct: 984  LELRVVM---SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKAL 1040

Query: 624  VESYLNK 630
            +   L +
Sbjct: 1041 IRGLLAR 1047



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 204/468 (43%), Gaps = 17/468 (3%)

Query: 124  ALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
             L+ F   D   +  H P    Y  +L+ L K    + A++ L+ +           ++ 
Sbjct: 559  GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 618

Query: 182  LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
            L+ A  ++G L  A+ +   M + ++ P+     + I  L    K   A+ F +  +  G
Sbjct: 619  LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678

Query: 242  -ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
             + PN + Y C + G     + K  I   ++M   G +PD V+   ++    +  +I++ 
Sbjct: 679  NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738

Query: 301  RDLMEKMVNDSN---------LFHDQGR---IEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             DL+ +M N +          L H   +   +  +  L   +   G +PD +T  ++V G
Sbjct: 739  NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798

Query: 349  FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
             C    L+   K+L+     G + +  ++   ++  C NG+   A +++        + +
Sbjct: 799  ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858

Query: 409  AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
              T   ++  L R  +  E+  V+ EM K+G  P   +   LI  LCR G +  A    +
Sbjct: 859  KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918

Query: 469  ECL-NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            E + +K C  NV   ++++R   + G  +EA  LL  M   K  P   ++TT++    KN
Sbjct: 919  EMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 977

Query: 528  GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            G V EA EL + M + GL   +V+Y  +I   C  G +    +L E+M
Sbjct: 978  GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 152/589 (25%), Positives = 265/589 (44%), Gaps = 54/589 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D I Y  +++ L      Q A  +++ MA+ G  C P+  S+  V   + + G++  A  
Sbjct: 194 DAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 253

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           + + M +  V P++   N+ +  L     + KA   L +M   G+ P+ +TYN +I GY 
Sbjct: 254 LFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYS 313

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND------- 310
                K++ K+  +M  KG  PD V++ + M  LCK  R K+  ++ + M          
Sbjct: 314 CSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIV 373

Query: 311 ------------------SNLFHD----------------------QGRIEEAKELVNQM 330
                             +NLFH                       +G ++EA  +  +M
Sbjct: 374 SYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEM 433

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              G  P+VVTY+ +++ FCR+G L  A +   QM   G +PNT  Y + ++G C +G  
Sbjct: 434 QGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDL 493

Query: 391 LEAREMIN-TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
           ++A+E I+    +    PN + +S ++H L  EG++ +A DV   ++  G  PT V  N 
Sbjct: 494 VKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNS 553

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI   C  GKM+ A   +   ++ G   +VV   +L+ G+C+ G +++ L L  +M   K
Sbjct: 554 LIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKK 613

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P TVTY  ++D L + GR   A ++  +M+  G    + TY+ ++   C+    ++ +
Sbjct: 614 VKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAI 673

Query: 570 KLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            L  K L    C+   T  N +I  L      EEA  +   +  +    + ST  V++ +
Sbjct: 674 TLFHK-LGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRN 732

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
            L +G    A  +   M      P  +L   +   L+ +G   +A   M
Sbjct: 733 LLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYM 781



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 240/491 (48%), Gaps = 30/491 (6%)

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG--ITPNVLTYNCLIKG 255
           +L  M + +  P+ +  NT I  L   ++  +AL  ++RM   G   +P+V+++N +I G
Sbjct: 182 LLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 241

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           +     +  A  L +EM  KG  PD  +Y +++  LCK +                    
Sbjct: 242 FFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKAR-------------------- 281

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
               +++A+ ++ QM   G  PD VTY A+++G+   G   ++ KM ++M   G  P+TV
Sbjct: 282 ---AMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTV 338

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           ++++F++ LC +G+S +A E+      +   P+ ++YS+++HG   EG+ ++  ++   M
Sbjct: 339 TFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSM 398

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
             KG       IN+LI +  + G MD A     E   +G   NVV +++LI  FC+ G L
Sbjct: 399 ADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRL 458

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL-VPTVVTYRT 554
            +A+     M     +P+T  Y ++I     +G + +A E + +M+SKGL  P +V + +
Sbjct: 459 ADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSS 518

Query: 555 VIHRYCQVGRV---EDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           +IH  C  GRV   +D+  L+  +  +    T +N +I+  C  G +E+A  +L  ++  
Sbjct: 519 IIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVT-FNSLIDGYCLVGKMEKAFGVLDAMVSV 577

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
             + D  T + LV  Y   G       +   M ++ + P       V + L+  G++  A
Sbjct: 578 GIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAA 637

Query: 672 DTLMLRFVERG 682
             +    ++ G
Sbjct: 638 KKMFHEMIDSG 648



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 228/496 (45%), Gaps = 28/496 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +   +  L K    + A+ + + M  +G      ++S L+  Y+  G+  +   + 
Sbjct: 336 DTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLF 395

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    +  N    N  I        + +A+     MQ  G+ PNV+TY+ LI  +C +
Sbjct: 396 HSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRM 455

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R+ DA++   +M   G  P+   Y++++   C                         G 
Sbjct: 456 GRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCM-----------------------HGD 492

Query: 320 IEEAKELVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           + +AKE +++M   G   P++V ++++++  C  G +  A+ +   + H G +P  V++ 
Sbjct: 493 LVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFN 552

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           + ++G C  GK  +A  +++        P+ +T + ++ G  + GK+ +   + REM+ K
Sbjct: 553 SLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHK 612

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
              PT V  N+++  L R G+   AKK   E ++ G AV++  +  L++G C+    +EA
Sbjct: 613 KVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA 672

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           ++L   +       D     T+I+AL K  R EEA +L   + + GLVP V TY  +I  
Sbjct: 673 ITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRN 732

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
             + G VE+   +   M  K  C  +    N +I  L   G + +AG  + KV  T    
Sbjct: 733 LLKEGSVEEADTMFSSM-EKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISL 791

Query: 616 DASTCHVLVESYLNKG 631
           +AST  +L+  + +KG
Sbjct: 792 EASTTSLLMSLFSSKG 807



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/388 (22%), Positives = 174/388 (44%), Gaps = 40/388 (10%)

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH------------ 386
           V TY  +++  CR    D     + ++   G K  T+  T FL  LCH            
Sbjct: 124 VRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLL 183

Query: 387 ------------------------NGKSLEAREMINTSEEEWW--TPNAITYSVVMHGLR 420
                                   + +S EA +M+    +E    +P+ ++++ V+HG  
Sbjct: 184 HRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 243

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           ++G++S+AC++  EMV+KG  P     N ++ +LC+   MD A+  +++ ++KG   + V
Sbjct: 244 KQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGV 303

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + ++I G+   G  +E+  +   M      PDTVT+++ + +L K+GR ++A E+   M
Sbjct: 304 TYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYM 363

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYL 598
            +KG +P +V+Y  ++H Y   GR  D+  L   M  K      +  N +I      G +
Sbjct: 364 TTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMM 423

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           +EA  +  ++     + +  T   L+ ++   G    A +   +M +  + P+  +   +
Sbjct: 424 DEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSL 483

Query: 659 SERLILEGKSEEADTLMLRFVERGHIQP 686
                + G   +A   +   + +G  +P
Sbjct: 484 IHGFCMHGDLVKAKEFISEMMSKGLHRP 511



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 164/382 (42%), Gaps = 13/382 (3%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM- 196
           R + + Y  ++    +      A      M   GIE     +  L+  +   G L  A  
Sbjct: 439 RPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKE 498

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           ++  MM K    PN++  ++ IH L +  ++  A      +   G  P ++T+N LI GY
Sbjct: 499 FISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGY 558

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE----VRDLMEKMVNDSN 312
           C + +++ A  ++D M   G  PD V+  T++   CK  +I +     R+++ K V  + 
Sbjct: 559 CLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTT 618

Query: 313 LFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           + ++         GR   AK++ ++M   G   D+ TY  ++ G CR    D+A  +  +
Sbjct: 619 VTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHK 678

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           +    CK +       +N L    +  EA ++          PN  TY V++  L +EG 
Sbjct: 679 LGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGS 738

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + EA  +   M K G  P+   +N +I+ L ++G +  A  +M +      ++     + 
Sbjct: 739 VEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSL 798

Query: 485 LIRGFCQKGDLEEALSLLDDMY 506
           L+  F  KG   E +  L   Y
Sbjct: 799 LMSLFSSKGKHREQIKFLPAKY 820


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 233/467 (49%), Gaps = 17/467 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  V+  M + GI+     F+ L+      GK++ A+ + + M  +   PN++  NT I+
Sbjct: 150 AVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVIN 209

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L        A+R   +M+     PNV+TYN +I   C    + +A++ + EM  +G  P
Sbjct: 210 GLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP 269

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFH-------DQGRIEEAKELV 327
           D V+Y T++   C   ++ E   L ++MV      D+  F+        +G + EA+ + 
Sbjct: 270 DVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVS 329

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
             M++ G  P+  TY A+++G+C   ++D+A K+L  M   GC PN  SY   +NG C +
Sbjct: 330 ETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKS 389

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            +  EA+ +++   E+  TP+ +TYS +M GL + G+  EA ++ +EM   G  P  +  
Sbjct: 390 KRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAY 449

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           ++L+   C+ G +D A K ++E   +    N++ +T LIRG    G LE A  L   +  
Sbjct: 450 SILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSA 509

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD  TY  +I  L K G  +EA E   KM   G +P   +Y  +I  + Q      
Sbjct: 510 DGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSST 569

Query: 568 LLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
            ++L+++M+ K+   +A +   + L     LE   +I+ + +R +S+
Sbjct: 570 AIQLIDEMVGKR--FSADSSTFQMLLD---LESHDEIISRFMRGSSQ 611



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 233/485 (48%), Gaps = 65/485 (13%)

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           + + A+    +M L G+T NV + N LI   C L  +  A+ ++ +M   G  PD +++ 
Sbjct: 111 QYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFN 170

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
           T++  LC E                       G+I+EA  L N+M   G  P+V++Y  V
Sbjct: 171 TLINGLCNE-----------------------GKIKEAVGLFNEMVWSGHEPNVISYNTV 207

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           +NG C+ G    A ++ ++M  +  KPN V+Y   ++ LC +    EA E ++   +   
Sbjct: 208 INGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGI 267

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG------- 458
            P+ +TY+ ++HG    G+L+EA  + +EMV +   P  V  N+L+  LC+EG       
Sbjct: 268 PPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARC 327

Query: 459 ----------------------------KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
                                       +MD A K +   + KGCA N+ ++  LI G+C
Sbjct: 328 VSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYC 387

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +   + EA  LL +M      PDTVTY+T++  L + GR  EA  L  +M S GL+P ++
Sbjct: 388 KSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLM 447

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
            Y  ++  +C+ G +++ LKLL++M  +  +     Y  +I  +   G LE A ++  K+
Sbjct: 448 AYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKL 507

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
                + D  T +V+++  L +G+   AY+   +M +   +PD       S  +I++G  
Sbjct: 508 SADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPD-----SCSYNVIIQGFL 562

Query: 669 EEADT 673
           +  D+
Sbjct: 563 QNQDS 567



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 245/510 (48%), Gaps = 32/510 (6%)

Query: 124 ALQFFYWADRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           AL  FY   R  R    P V  +   L  ++K K    A  +   M   G+     + + 
Sbjct: 80  ALTSFY---RMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+    R   +  A+ V+  M K  + P+ +  NT I+ L    K+ +A+     M  +G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             PNV++YN +I G C       A+++  +M      P+ V+Y T++  LCK++ +    
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVN--- 253

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                               EA E +++M   G  PDVVTY  +++GFC +G+L++A ++
Sbjct: 254 --------------------EAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRL 293

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
            ++M      P+TV++   ++GLC  G   EAR +  T  E+   PNA TY+ +M G   
Sbjct: 294 FKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCL 353

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
             ++ EA  V+  M+ KG  P     N+LI   C+  +M+ AK+ + E   K    + V 
Sbjct: 354 HNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVT 413

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +++L++G CQ G   EAL+L  +M      PD + Y+ ++D   K+G ++EA +L+ +M 
Sbjct: 414 YSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMH 473

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYL 598
            + + P ++ Y  +I      G++E   +L  K LS    R     YN +I+ L   G  
Sbjct: 474 ERRIKPNIILYTILIRGMFIAGKLEVAKELFSK-LSADGIRPDIWTYNVMIKGLLKEGLS 532

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYL 628
           +EA +   K+       D+ + +V+++ +L
Sbjct: 533 DEAYEFFRKMEDDGFLPDSCSYNVIIQGFL 562



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 189/402 (47%), Gaps = 49/402 (12%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           Q R + + + Y  +++ L K +L   A   L  M  RGI      ++ ++  +   G+L 
Sbjct: 229 QNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLN 288

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  +   M    V P+ +  N  +  L     +++A    E M   G  PN  TYN L+
Sbjct: 289 EATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALM 348

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            GYC  +++ +AIK++  M  KGC+P+  SY  ++   CK KR+ E + L+ +M ++ NL
Sbjct: 349 DGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEM-SEKNL 407

Query: 314 FHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
             D              GR  EA  L  +M   G +PD++ Y+ +++GFC+ G LD+A K
Sbjct: 408 TPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK 467

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L++M+    KPN + YT  + G+   GK   A+E+ +    +   P+  TY+V++ GL 
Sbjct: 468 LLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLL 527

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +EG   EA +  R+M   GF P                                C+ NV+
Sbjct: 528 KEGLSDEAYEFFRKMEDDGFLP------------------------------DSCSYNVI 557

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
                I+GF Q  D   A+ L+D+M   +   D+ T+  ++D
Sbjct: 558 -----IQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 161/366 (43%), Gaps = 37/366 (10%)

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            +D A     +M     +P+ V +  FL  +    +   A  + N  +    T N  + +
Sbjct: 76  SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           V+++ L R   +  A  V+ +M K G  P  +  N LI  LC EGK+  A     E +  
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   NV+++ ++I G C+ G+   A+ +   M   +  P+ VTY TIID+L K+  V EA
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL--------------------- 572
            E + +M+ +G+ P VVTY T++H +C +G++ +  +L                      
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315

Query: 573 ---EKMLSKQKCRT-------------AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
              E M+S+ +C +              YN +++  C    ++EA K+LG ++      +
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
            S+ ++L+  Y        A ++   M  +NL PD      + + L   G+  EA  L  
Sbjct: 376 LSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFK 435

Query: 677 RFVERG 682
                G
Sbjct: 436 EMCSSG 441


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/576 (26%), Positives = 265/576 (46%), Gaps = 23/576 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
           D   Y ++L+ L        A  +LR+MA  G  C P+  A+S ++  + + G +  A  
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACD 240

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  + P+ +  ++ +H L     + KA  FL +M   G+ PN  TYN LI GY 
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYS 300

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV---NDSNLF 314
              + K+A+++  EM      PD V+   +MG LCK  +IKE RD+ + M     + N+F
Sbjct: 301 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVF 360

Query: 315 H---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                      +G + +  +L + M   G  PD+ T+  ++  +   G LD+A  +  +M
Sbjct: 361 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
             HG KP+ V+Y   +  LC  GK  +A E  N   ++   P+   Y  ++ G    G L
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 480

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A +++ E++  G     V  + +I +LC+ G++  A+      +N G     V ++ L
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSML 540

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           + G+C  G +E+AL + D M     +P+ V Y T+++   K GR++E   L  +ML KG+
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600

Query: 546 VPTVVTYRTVIHRYCQVGRVED----LLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEA 601
            P+ + Y  +I    + GR         ++ E  ++  KC   YN V+  L      +EA
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC--TYNIVLRGLFKNRCFDEA 658

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
             +  ++     K +  T + ++           A  +   +    L+P +     +   
Sbjct: 659 IFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN 718

Query: 662 LILEGKSEEADTLMLRFVERGHIQPKSE--EHLQRQ 695
           LI EG  EEA+  M   ++    +P S    H+ R+
Sbjct: 719 LIKEGLVEEAED-MFSSMQNAGCEPDSRLLNHVVRE 753



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 181/387 (46%), Gaps = 12/387 (3%)

Query: 166 LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
           LM   GI      F+ L+ AY+  G L  AM + + M+   V P+++   T I  L    
Sbjct: 384 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           K+  A+    +M   G+ P+   Y+CLI+G+C    +  A +LI E+   G   D V + 
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 503

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDS--------NLFHDQ----GRIEEAKELVNQMSQM 333
           +++  LCK  R+ + +++ +  VN          ++  D     G++E+A  + + M   
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  P+ V Y  +VNG+C++G +D+   + ++M   G KP+T+ Y   ++GL   G+++ A
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 623

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
           +   +   E     N  TY++V+ GL +     EA  + +E+         + +N +I  
Sbjct: 624 KVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAG 683

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           + +  +++ AK         G    VV ++ +I    ++G +EEA  +   M     +PD
Sbjct: 684 MFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKM 540
           +     ++  L K   +  A   + K+
Sbjct: 744 SRLLNHVVRELLKKNEIVRAGAYLSKI 770



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 208/485 (42%), Gaps = 62/485 (12%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           ++P   TY  L+      HR + A+    ++   G   + +    ++   C+ KR  E  
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
           D+                      L+++  ++GC+PDV +Y+ ++   C  G+  QA  +
Sbjct: 167 DI----------------------LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 204

Query: 362 LQQMYHHG--CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH-- 417
           L+ M   G  C P+ V+Y+  ++G    G   +A ++     +    P+ +TYS V+H  
Sbjct: 205 LRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHAL 264

Query: 418 ---------------------------------GLRREGKLSEACDVVREMVKKGFFPTP 444
                                            G    G+  EA  V +EM +    P  
Sbjct: 265 CKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDV 324

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V +++L+ SLC+ GK+  A+        KG   NV ++T ++ G+  KG L +   L D 
Sbjct: 325 VTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDL 384

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      PD  T+  +I A +  G +++A  +  +M   G+ P VVTYRTVI   C++G+
Sbjct: 385 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 444

Query: 565 VEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           ++D ++   +M+ +     + AY+ +I+  C+ G L +A +++ +++      D      
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 504

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++ +    G  + A  +     N  L P   +   + +   L GK E+A  +    V  G
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564

Query: 683 HIQPK 687
            I+P 
Sbjct: 565 -IEPN 568



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/386 (20%), Positives = 169/386 (43%), Gaps = 12/386 (3%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R    + D + Y  ++  L +      A      M  +G+     A+  L+  +   G L
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 480

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A  ++S +    +  +++  ++ I+ L    ++  A    +     G+ P  + Y+ L
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSML 540

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE----VRDLMEKMV 308
           + GYC + +++ A+++ D M   G  P+ V Y T++   CK  RI E     R++++K +
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600

Query: 309 NDSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
             S + ++         GR   AK   ++M++ G   +  TY  V+ G  +    D+A  
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIF 660

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           + +++     K N ++    + G+    +  EA+++  +       P  +TYS+++  L 
Sbjct: 661 LFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLI 720

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +EG + EA D+   M   G  P    +N +++ L ++ ++  A  ++ +   +  ++  +
Sbjct: 721 KEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHL 780

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMY 506
               L+  F  KG   E +  L   Y
Sbjct: 781 TTMLLVDLFSSKGTCREHIRFLPAKY 806


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 235/512 (45%), Gaps = 32/512 (6%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R+ I C   +F+ L+  +    KL  A+     + K  + P+++   T +H L + ++
Sbjct: 107 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHR 166

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++AL    ++      P+VLT+  L+ G C   R+ +A+ L+D M   G  PD+++Y T
Sbjct: 167 VSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGT 222

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQM 333
            +  +CK        +L+ KM   S++  +              GR  ++  L  +M   
Sbjct: 223 FVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDK 282

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  P++VTY  ++ GFC  G    A+++LQ+M      PN V+Y A +N     GK  EA
Sbjct: 283 GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEA 342

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            E+ +        PN ITY+ ++ G  ++ +L  A D+   M  KG  P       LI  
Sbjct: 343 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C   ++D   + + E   +G   N V + +LI GFC  GDL  AL L   M      PD
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSK------------GLVPTVVTYRTVIHRYCQ 561
            VT  T++D L  NG++++A E M K + K            G+ P V+TY  +I     
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALE-MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 521

Query: 562 VGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G+  +  +L E+M  +        Y+ +I+ LC    L+EA ++   +   +   +  T
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 581

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            + L+  Y   G      ++ C M  R ++ D
Sbjct: 582 FNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 138/513 (26%), Positives = 258/513 (50%), Gaps = 25/513 (4%)

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           L +A+ + S M ++   P+++  N  +  +V   +    +   ++M+   I  ++ ++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LIK +C   ++  A+    ++   G  PD V++ T++  LC + R+ E  DL  ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 312 --------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   N    +GR+ EA  L+++M + G  PD +TY   V+G C++G+   A  +L+
Sbjct: 182 VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241

Query: 364 QMYH-HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           +M      KPN V Y+A ++GLC +G+  ++  +    +++   PN +TY+ ++ G    
Sbjct: 242 KMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCIS 301

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G+ S A  +++EM+++   P  V  N LI +  +EGK   A +   E L +G   N + +
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            S+I GFC++  L+ A  +   M      PD  T+TT+ID      R+++  EL+ +M  
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEE 600
           +GLV   VTY T+IH +C VG +   L L ++M+S   C      N +++ LC  G L++
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481

Query: 601 AGKILGKVLRTASKADAS-----------TCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           A ++   + ++    DAS           T ++L+   +N+G  L A ++   M +R ++
Sbjct: 482 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV 541

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           PD      + + L  + + +EA  +   FV  G
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQM---FVSMG 571



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 221/468 (47%), Gaps = 34/468 (7%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            D   AL      +     + + ++Y  +++ L K      +  +   M  +GI      
Sbjct: 231 GDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVT 290

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ ++  +  +G+   A  +L  M +  ++PN++  N  I+  V   K  +A    + M 
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML 350

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             GI PN +TYN +I G+C   R+  A  +   M  KGCSPD  ++ T++   C  KRI 
Sbjct: 351 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI- 409

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                                 ++  EL+++M + G + + VTY  +++GFC VG+L+ A
Sbjct: 410 ----------------------DDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE-----------WWTP 407
             + QQM   G  P+ V+    L+GLC NGK  +A EM    ++               P
Sbjct: 448 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 507

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           + +TY++++ GL  EGK  EA ++  EM  +G  P  +  + +I  LC++ ++D A +  
Sbjct: 508 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
               +K  + NVV F +LI G+C+ G +++ L L  +M       D + Y T+I    K 
Sbjct: 568 VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKV 627

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           G +  A ++  +M+S G+ P  +T R ++  +     +E  + +LE +
Sbjct: 628 GNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 216/466 (46%), Gaps = 61/466 (13%)

Query: 174 CRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           CRP+   F+ LM    R G++  A+ +L  M +  + P+ +   T +  +        AL
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 232 RFLERMQ-LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
             L +M+ ++ I PNV+ Y+ +I G C   R  D+  L  EM  KG  P+ V+Y  ++G 
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
            C   R    + L+++M+               N F  +G+  EA EL ++M   G IP+
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            +TY ++++GFC+   LD A+ M   M   GC P+  ++T  ++G C   +  +  E+++
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                    N +TY+ ++HG    G L+ A D+ ++M+  G  P  V  N L+  LC  G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 459 KMDGA----------------------------------------KKFMQ------ECLN 472
           K+  A                                         KF++      E  +
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +G   + + ++S+I G C++  L+EA  +   M      P+ VT+ T+I+   K GRV++
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 597

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
             EL  +M  +G+V   + Y T+I+ + +VG +   L + ++M+S 
Sbjct: 598 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 643



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 227/502 (45%), Gaps = 74/502 (14%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---- 307
           L  G  ++  ++DAI L  +M      P  + +  +MG + + +R   V  L +KM    
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 308 ----------------------------------------VNDSNLFHD---QGRIEEAK 324
                                                   V  + L H      R+ EA 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +L +Q+    C PDV+T+T ++NG CR G + +A  +L +M  +G +P+ ++Y  F++G+
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 385 CHNGKSLEAREMINTSEE-EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           C  G ++ A  ++   EE     PN + YS ++ GL ++G+ S++ ++  EM  KG FP 
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V  N +I   C  G+   A++ +QE L +  + NVV + +LI  F ++G   EA  L D
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M      P+T+TY ++ID   K  R++ A ++   M +KG  P V T+ T+I  YC   
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 407

Query: 564 RVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           R++D ++LL +M  +        YN +I   C  G L  A  +  +++ +    D  TC+
Sbjct: 408 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 467

Query: 622 VLVESYLNKGIPLLAYKVACRMFN---------------RNLIPDLKLCKKVSERLILEG 666
            L++   + G      K A  MF                  + PD+     +   LI EG
Sbjct: 468 TLLDGLCDNG----KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 523

Query: 667 KSEEADTLMLRFVERGHIQPKS 688
           K  EA+ L      RG I P +
Sbjct: 524 KFLEAEELYEEMPHRG-IVPDT 544



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 64/274 (23%)

Query: 159 GAKRV------LRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
           GAKR+      L  M RRG+      ++ L+  +   G L  A+ +   M  + V P+++
Sbjct: 405 GAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIV 464

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQ-----------LAGITPNVLTYNCLIKGYCDLHR 261
            CNT +  L    KL  AL   + MQ             G+ P+VLTYN LI G  +  +
Sbjct: 465 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGK 524

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
             +A +L +EMP +G  PD ++Y +++  LCK+ R+ E   +   M + S          
Sbjct: 525 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNT 584

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG---------------- 353
             N +   GR+++  EL  +M + G + D + Y  ++ GF +VG                
Sbjct: 585 LINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSG 644

Query: 354 -------------------ELDQAKKMLQQMYHH 368
                              EL++A  ML+ +  +
Sbjct: 645 VYPDTITIRNMLTGFWSKEELERAVAMLEDLQRY 678


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 160/642 (24%), Positives = 292/642 (45%), Gaps = 79/642 (12%)

Query: 105 SLKPRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
           +L P  +  +L   + D ++AL+FF WA  Q  +RH    Y +++ ++ + ++   A   
Sbjct: 126 ALAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDT 185

Query: 164 LR--------------------LMARRGI-------------------------EC---- 174
           ++                    L + R I                         EC    
Sbjct: 186 VKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRM 245

Query: 175 -----RPEAFS--YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
                 P+A S  +L+   S++G  +      + M  A +AP++   N  I  L     L
Sbjct: 246 RNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDL 305

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
             + R   +M+  G++P+V+TYN LI GY  +  +++   L +EM   GC PD ++Y  +
Sbjct: 306 ENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGL 365

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGC 335
           +   CK +++    +   +M N+             + F  +G ++ A +L   M + G 
Sbjct: 366 INCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGL 425

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           +P+  TYT++++  C+ G L +A K+L  M   G K N V+YTA L+GLC  G+ +EA E
Sbjct: 426 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEE 485

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +  +  ++  +PN   Y+ ++HG  +  ++ +A  ++++M +    P  +    +I   C
Sbjct: 486 VFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHC 545

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
            + K++  K  ++E  ++G + N V  T++I  + + G   +AL+   +M     +   V
Sbjct: 546 SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIV 605

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY  +ID L K G VE A +   +MLS GL P V  Y ++I   C+   +E   KL ++M
Sbjct: 606 TYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEM 665

Query: 576 LSKQKCR------TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
               +CR      TA+  +I+     G L+EA  ++ ++   A + D      LV  +  
Sbjct: 666 ----QCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQ 721

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
            G    A K    M  + ++P+  LC  +       G+ +EA
Sbjct: 722 CGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEA 763



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 201/420 (47%), Gaps = 14/420 (3%)

Query: 170 RGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           + + C P+  +Y  L+  Y +  K+  A    S M+   + PN++  +T I        +
Sbjct: 351 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 410

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
             A++    M+  G+ PN  TY  LI   C    + +A KL+++M   G   + V+Y  +
Sbjct: 411 QGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 470

Query: 288 MGYLCKEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMGC 335
           +  LCK  R+ E  ++   M+ D         + L H      R+E+A +++ QM++   
Sbjct: 471 LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 530

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PD++ Y +++ G C   +L++ K +L++M   G   N V  T  ++     GKS +A  
Sbjct: 531 KPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALN 590

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
                ++       +TY V++ GL + G +  A D    M+  G  P       LI  LC
Sbjct: 591 FFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC 650

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           +   ++ AKK   E   +G   ++  FT+LI G  + G+L+EAL L+  M     + D  
Sbjct: 651 KNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 710

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            YT+++   S+ G + +A +   +M+ KG++P  V    ++  Y + G++++ ++L  +M
Sbjct: 711 VYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 770



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/405 (23%), Positives = 195/405 (48%), Gaps = 27/405 (6%)

Query: 121 ERVALQFFYWAD-RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF 179
           E++   F Y+++ +    + + + Y  +++   K  + QGA ++   M R G+   P  F
Sbjct: 373 EKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGL--LPNEF 430

Query: 180 SY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +Y  L+ A  +AG L  A  +L+ M +A V  N++     +  L    ++ +A      M
Sbjct: 431 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 490

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              GI+PN   Y  L+ GY    R++DA+K++ +M      PD + Y +++   C ++++
Sbjct: 491 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL 550

Query: 298 KEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
           +E + ++E+M +              + +   G+  +A     +M  +G    +VTY  +
Sbjct: 551 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 610

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G C+ G ++ A     +M   G +PN   YT+ ++GLC N     A+++ +  +    
Sbjct: 611 IDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGM 670

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL-----LIQSLCREGKM 460
           TP+   ++ ++ G  + G L EA  ++  M +       +E +L     L+    + G++
Sbjct: 671 TPDITAFTALIDGNLKHGNLQEALVLISRMTE-----LAIEFDLHVYTSLVSGFSQCGEL 725

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             A+KF  E + KG     V    L+R + ++G L+EA+ L ++M
Sbjct: 726 HQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 770



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 151/350 (43%), Gaps = 2/350 (0%)

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C+     +  + + F  +G L++A +   +M +    P   S    L+ L  +G     R
Sbjct: 215 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 274

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +  N        P+  TY+V++  L +EG L  +  +  +M + G  P  V  N LI   
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            + G ++       E  + GC  +++ +  LI  +C+   +  A     +M      P+ 
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VTY+T+IDA  K G ++ A +L + M   GL+P   TY ++I   C+ G + +  KLL  
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454

Query: 575 MLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           ML    +     Y  +++ LC  G + EA ++   +L+     +      LV  Y+    
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              A K+  +M   N+ PDL L   +      + K EE   ++     RG
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 564



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 110/242 (45%), Gaps = 23/242 (9%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
            K +L  M  RGI   P   + ++ AY +AGK  +A+     MQ   V   ++     I 
Sbjct: 553 TKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLID 612

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L     +  A+ +  RM   G+ PNV  Y  LI G C  + I+ A KL DEM  +G +P
Sbjct: 613 GLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTP 672

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D  ++  ++                     D NL H  G ++EA  L+++M+++    D+
Sbjct: 673 DITAFTALI---------------------DGNLKH--GNLQEALVLISRMTELAIEFDL 709

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
             YT++V+GF + GEL QA+K   +M   G  P  V     L      G+  EA E+ N 
Sbjct: 710 HVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNE 769

Query: 400 SE 401
            E
Sbjct: 770 ME 771



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/339 (21%), Positives = 134/339 (39%), Gaps = 59/339 (17%)

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKK-----GF------------------------- 440
           +Y +++H + R    ++A D V+E++       GF                         
Sbjct: 165 SYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDV 224

Query: 441 -FPTPVEI-------------------------NLLIQSLCREGKMDGAKKFMQECLNKG 474
            F   VE+                         N L+  L + G     +KF  + +  G
Sbjct: 225 LFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAG 284

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
            A +V  +  +I   C++GDLE +  L   M      PD VTY ++ID   K G +EE  
Sbjct: 285 IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVA 344

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
            L  +M   G VP ++TY  +I+ YC+  ++    +   +M +   +     Y+ +I+  
Sbjct: 345 SLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAF 404

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G ++ A K+   + RT    +  T   L+++    G    A+K+   M    +  ++
Sbjct: 405 CKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNI 464

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
                + + L   G+  EA+ +    ++ G I P  + +
Sbjct: 465 VTYTALLDGLCKAGRMIEAEEVFRSMLKDG-ISPNQQVY 502


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 247/521 (47%), Gaps = 32/521 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  DP++Y   + ++SK    + AK +   M   G+     A++ L+  + R   +R   
Sbjct: 346 FSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGY 405

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  ++K  +  +     TA+  +     L  A   ++ M  +G  PNV+ Y  LIK +
Sbjct: 406 ELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTF 465

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
               R  DA++++ EM  +G +PD   Y +++  L K K++ E R  + +MV +      
Sbjct: 466 LQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVEN------ 519

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
                            G  PD  TY A ++G+   GE   A K +++M   G  PN V 
Sbjct: 520 -----------------GFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVL 562

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
            T  +N  C  GK +EA     +  E+    +A TY+V+M+GL + GK+++A ++  EM 
Sbjct: 563 CTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMR 622

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            KG  P       LI    + G M  A     E +  G   NV+ +  L+ GFC+ G++E
Sbjct: 623 GKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIE 682

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +A  LLD+M      P+ VTY TIID   K+G + EA +L  +M  KGLVP    Y T++
Sbjct: 683 KAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLV 742

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTA- 612
              C++  VE  + + E   +++ C ++   +N +I  +  FG  E    ++ +++  + 
Sbjct: 743 DGCCRLNDVERAITIFET--NEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSF 800

Query: 613 ---SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
               K +  T +++++    +G    A ++   M   NL+P
Sbjct: 801 DKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMP 841



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 242/536 (45%), Gaps = 28/536 (5%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYV 198
           P  Y   ++ +  +    GA  +++ M   G  CRP    Y  L+  + +  +  +A+ V
Sbjct: 420 PYTYGTAVKGMCSSGDLDGAYNIVKEMGASG--CRPNVVIYTTLIKTFLQKSRFGDAVRV 477

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L  M++  +AP+    N+ I  L    K+ +A  FL  M   G  P+  TY   I GY +
Sbjct: 478 LKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIE 537

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
                 A K + EM   G  P+KV    ++   CK+ ++ E       MV          
Sbjct: 538 AGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKT 597

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                N     G++ +A+E+ ++M   G  PDV +Y  +++GF ++G + +A  +  +M 
Sbjct: 598 YTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMV 657

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G   N + Y   L G C +G+  +A+E+++    + + PNA+TY  ++ G  + G L+
Sbjct: 658 QAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLA 717

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA  +  EM  KG  P       L+   CR   ++ A     E   KGCA +   F +LI
Sbjct: 718 EAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALI 776

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKD----PDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
               + G  E    +++ +     D    P+ VTY  +ID L K G +E A EL   M  
Sbjct: 777 NWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQK 836

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
             L+PTV+TY ++++ Y ++GR  ++  + +++++   +     Y+ +I      G   +
Sbjct: 837 ANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTK 896

Query: 601 AGKILGKVLRTASKADA-----STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           A  +L ++    +  D      STC  L+  +   G   +A KV   M     IPD
Sbjct: 897 ALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPD 952



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 225/467 (48%), Gaps = 26/467 (5%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           R+     D   Y  ++  LSK K    A+  L  M   G   +P+AF+Y   +  Y  AG
Sbjct: 482 REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGF--KPDAFTYGAFISGYIEAG 539

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +  +A   +  M +  V PN ++C   I+      K+ +A      M   GI  +  TY 
Sbjct: 540 EFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYT 599

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN- 309
            L+ G     ++ DA ++  EM  KG +PD  SY T++    K   +++   + ++MV  
Sbjct: 600 VLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQA 659

Query: 310 --DSNL---------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
              SN+         F   G IE+AKEL+++MS  G  P+ VTY  +++G+C+ G+L +A
Sbjct: 660 GLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEA 719

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            ++  +M   G  P++  YT  ++G C       A  +  T+E+   + +A  ++ +++ 
Sbjct: 720 FQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSA-PFNALINW 778

Query: 419 LRREGKLSEACDVVREMVKKGF----FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           + + GK     D++  ++   F     P  V  N++I  LC+EG ++ AK+         
Sbjct: 779 VFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKAN 838

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
               V+ +TSL+ G+ + G   E  S+ D++     +PD + Y+ II+A  K G   +A 
Sbjct: 839 LMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKAL 898

Query: 535 ELMMKMLSKGLVP-----TVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
            L+ +M +K  V      ++ T R ++  + +VG +E   K++E M+
Sbjct: 899 VLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMV 945



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 147/632 (23%), Positives = 264/632 (41%), Gaps = 76/632 (12%)

Query: 101 NLLRSLKPRQICAVLRSQ--ADERVALQFFYWADRQWRYRHDPIVY-YMMLEILSKTKLC 157
           NL   + P  + +VLRS+   D    L FF   D Q         + ++ L++ +   + 
Sbjct: 55  NLSIEINPEVVLSVLRSKRVDDPSKLLSFFNLVDSQKVTEQKLDSFSFLALDLCNFGSIE 114

Query: 158 QGAKRVLRLMARRG---------IEC----------RPEAFSYLMVAYSRAGKLRNAMYV 198
           +    V+R++ R+          + C          R   F  L+  Y   G L  A++V
Sbjct: 115 KAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSDDRVLLFGILIDGYIEKGFLDEAVFV 174

Query: 199 LSMMQKAAV--APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            S  +   +   P+L  CN  +  L+  N+L       + M    +  +V +Y  LI  +
Sbjct: 175 FSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAH 234

Query: 257 C---DLHRIKD------------------AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
           C   ++   KD                  A++L   M  KG  P + SY  ++  LCK+K
Sbjct: 235 CRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQK 294

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           R+                       E+AK L+ +M+ +G   D V Y+ +++G  +    
Sbjct: 295 RL-----------------------EDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNA 331

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D A  ++ +M  HG   + + Y  F+  +   G   +A+ + +       TP A  Y+ +
Sbjct: 332 DAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASL 391

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + G  RE  + +  +++ E+ K+    +P      ++ +C  G +DGA   ++E    GC
Sbjct: 392 IEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGC 451

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             NVV +T+LI+ F QK    +A+ +L +M      PDT  Y ++I  LSK  +++EA  
Sbjct: 452 RPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARS 511

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV-----IE 590
            +++M+  G  P   TY   I  Y + G      K +++ML   +C    N+V     I 
Sbjct: 512 FLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEML---ECGVIPNKVLCTGLIN 568

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
             C  G + EA      ++      DA T  VL+   +  G    A ++   M  + + P
Sbjct: 569 EYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAP 628

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           D+     + +     G  ++A ++    V+ G
Sbjct: 629 DVFSYGTLIDGFSKLGNMQKASSIFDEMVQAG 660



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 187/389 (48%), Gaps = 22/389 (5%)

Query: 164 LRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
            R M  +GI    + ++ LM    + GK+ +A  +   M+   +AP++    T I     
Sbjct: 583 FRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSK 642

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
              + KA    + M  AG+T NV+ YN L+ G+C    I+ A +L+DEM  KG  P+ V+
Sbjct: 643 LGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVT 702

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKM-----VNDS----NLFHDQGRIEEAKELVN--QMSQ 332
           Y T++   CK   + E   L ++M     V DS     L     R+ + +  +   + ++
Sbjct: 703 YCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNE 762

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM----YHHGCKPNTVSYTAFLNGLCHNG 388
            GC      + A++N   + G+ +    M+ ++    +    KPN V+Y   ++ LC  G
Sbjct: 763 KGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEG 822

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
               A+E+ +  ++    P  ITY+ +++G  + G+ SE   V  E++  G  P  +  +
Sbjct: 823 NLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYS 882

Query: 449 LLIQSLCREGKMDGA-----KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
           ++I +  +EG    A     + F +  ++ GC +++    +L+ GF + G++E A  +++
Sbjct: 883 VIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVE 942

Query: 504 DMYLCKKDPDTVTYTTIID--ALSKNGRV 530
           +M   K  PD+ T   +I+   +S N R+
Sbjct: 943 NMVRLKYIPDSSTVIELINESCISSNQRM 971


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/529 (29%), Positives = 249/529 (47%), Gaps = 39/529 (7%)

Query: 163 VLRLMARRGIECRP---EAFSYLMVAYSRAGKLRNAMYVLSMMQK-AAVAPNLLICNTAI 218
           VLRL +      RP     F+ L+   SR      A+ + + M + A  AP     N  I
Sbjct: 101 VLRLHSLSPPPLRPLFDRPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVI 160

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
             L     LA+ALR+L  M  +G  P+  T+N LI GYC  +++  A  L D+MPL+G +
Sbjct: 161 RSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFA 220

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPD 338
            D VSY T++  LC                       + GRI+EA EL  +M Q    PD
Sbjct: 221 QDVVSYATLIEGLC-----------------------EAGRIDEAVELFGEMDQ----PD 253

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           +  Y A+V G C     ++   ML++M   G +P+T +Y A ++  C   K+ EA EM+ 
Sbjct: 254 MHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQ 313

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
              E+   P  +T + V++   +EG++S+A  V+  M  +G  P     N L+Q  C EG
Sbjct: 314 EMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEG 373

Query: 459 KMDGAKKFMQECLNKGCAVN--VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           K+  A   + +   + C VN   V +  LIRG C  G +E A  LL  M       D  T
Sbjct: 374 KVHKAMTLLNKM--RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 431

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y  +I+AL K+GR ++A  L   + ++G+ P  VT+ ++I+  C+ G+ +   K LEKM+
Sbjct: 432 YNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV 491

Query: 577 SKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           S   C      Y+  IE+LC     +E    +G++L+   K       +++   L +   
Sbjct: 492 SA-GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNY 550

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            L  +    M +    PD+           +EG+  EA+ +++   + G
Sbjct: 551 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 599



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 152/568 (26%), Positives = 257/568 (45%), Gaps = 29/568 (5%)

Query: 74  RHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADR 133
           RH L   +  ++ L S   P L         SL      A L   A   +AL+ F    R
Sbjct: 91  RHLLAVALPVVLRLHSLSPPPLRPLFDRPFASL-----LAHLSRFALAPLALRLFAHMHR 145

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGK 191
                     Y  ++  L +      A R L LM R G   RP+A+++  L+V Y R  +
Sbjct: 146 HAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSG--WRPDAYTFNSLIVGYCRTNQ 203

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +  A  +   M     A +++   T I  L    ++ +A+     M      P++  Y  
Sbjct: 204 VDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAA 259

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           L+KG C+  R ++ + ++  M   G  P   +Y  V+ + C+E++ KE  +++++M    
Sbjct: 260 LVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKG 319

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                       N +  +GR+ +A  ++  M   GC P+V TY A+V GFC  G++ +A 
Sbjct: 320 LAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAM 379

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            +L +M   G  P+ V+Y   + G C +G    A  ++   E +    +  TY+ +++ L
Sbjct: 380 TLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINAL 439

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            ++G+  +AC +   +  +G  P  V  N LI  LC+ GK D A KF+++ ++ GC  + 
Sbjct: 440 CKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDT 499

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
             ++S I   C+    +E LS + +M      P TV YT +I  L K            +
Sbjct: 500 YTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGE 559

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFG 596
           M+S G  P VVTY T +  YC  GR+ +   +L +M SK        AYN +++   S G
Sbjct: 560 MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEM-SKNGVTVDTMAYNTLMDGHASIG 618

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLV 624
             + A  IL ++   AS  +  T  +L+
Sbjct: 619 QTDHAVSILKQMTSVASVPNQFTYFILL 646



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 240/533 (45%), Gaps = 42/533 (7%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           +LR M   G      A++ ++    R  K + A  +L  M +  +AP ++ C   I+   
Sbjct: 276 MLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYC 335

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              +++ ALR LE M+L G  PNV TYN L++G+C+  ++  A+ L+++M   G +PD V
Sbjct: 336 KEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAV 395

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           +Y  ++   C +                       G IE A  L+  M   G I D  TY
Sbjct: 396 TYNLLIRGQCID-----------------------GHIESAFRLLRLMEGDGLIADQYTY 432

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
            A++N  C+ G  DQA  +   +   G KPN V++ + +NGLC +GK+  A + +     
Sbjct: 433 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVS 492

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
              TP+  TYS  +  L +     E    + EM++K   P+ V   ++I  L +E     
Sbjct: 493 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL 552

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
             +   E ++ GC  +VV +T+ +R +C +G L EA ++L +M       DT+ Y T++D
Sbjct: 553 VARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMD 612

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
             +  G+ + A  ++ +M S   VP   TY  ++    ++  VED+L L    + K    
Sbjct: 613 GHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIEL 672

Query: 583 T-------------------AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           T                    Y+ ++E     G  EEA  ++  +   +   +      L
Sbjct: 673 TDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTAL 732

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
           V  +      L A+ + C M     IP L   + +   LI EG++++A  + +
Sbjct: 733 VTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFM 785



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/442 (22%), Positives = 189/442 (42%), Gaps = 29/442 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y +++         + A R+LRLM   G+      ++ L+ A  + G+   A  + 
Sbjct: 393 DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLF 452

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             ++   + PN +  N+ I+ L    K   A +FLE+M  AG TP+  TY+  I+  C +
Sbjct: 453 DSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 512

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
              ++ +  I EM  K   P  V+Y  V+  L KE+    V     +MV+          
Sbjct: 513 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 572

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                 +  +GR+ EA+ ++ +MS+ G   D + Y  +++G   +G+ D A  +L+QM  
Sbjct: 573 TTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS 632

Query: 368 HGCKPNTVSYTAFLNGLCHN--------------GKSLEARE---MINTSEEEWWTPNAI 410
               PN  +Y   L  L                  K++E  +   + +  ++  + PN+ 
Sbjct: 633 VASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSG 692

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TYS ++ G   +G+  EA  +V  M +            L+   C+  +   A   +   
Sbjct: 693 TYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSM 752

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           +  G    ++++  L+ G   +G  ++A  +  +       PD + +  IID L K G  
Sbjct: 753 IQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHS 812

Query: 531 EEATELMMKMLSKGLVPTVVTY 552
           + + E+++ +      P+  TY
Sbjct: 813 DISREMIIMLERMNCRPSHQTY 834


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 231/487 (47%), Gaps = 39/487 (8%)

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
           ++ +G      +   ++M+LAG++P++ T + LI  +  L R+  A  +  +M   G  P
Sbjct: 104 IVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQP 163

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D V++ T++  LCK                        G+  +A E  +     GC P V
Sbjct: 164 DAVTFNTLINGLCK-----------------------VGKFAQAVEFFDDFEASGCQPTV 200

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            TYT ++NG C++GE   A  + ++M   GC+PN V+Y   ++ LC +    EA ++ + 
Sbjct: 201 YTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSY 260

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
            + +  +P+  TY+ ++ GL    +  EA  ++ EM      P     N+L+ ++C+EGK
Sbjct: 261 MKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGK 320

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +  A+   +     G   +VV ++SL+ G+  + ++ EA  L D M      PD  +Y  
Sbjct: 321 VSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNI 380

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +I    K  R++EA +L  +M+ +GL P  V Y T+IH  CQ+GR+ +   L + M S  
Sbjct: 381 LIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG 440

Query: 580 KCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
                  Y+ +++  C  GYL +A ++   +  T  K D +  ++L+++    G    A 
Sbjct: 441 NLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDAR 500

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA--------------DTLMLRFVERGH 683
           K+   +F + L+P++++   +   L  EG  +EA              D      + RG 
Sbjct: 501 KLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGF 560

Query: 684 IQPKSEE 690
           +Q K E 
Sbjct: 561 LQYKDES 567



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 212/464 (45%), Gaps = 25/464 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   G+       S L+  +S   ++  A  V S M K  + P+ +  NT I+ L    K
Sbjct: 121 MELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGK 180

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
            A+A+ F +  + +G  P V TY  +I G C +     A  L  +M   GC P+ V+Y  
Sbjct: 181 FAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNI 240

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LCK+K + E  D+   M              +AK +          PD+ TY +++
Sbjct: 241 LIDSLCKDKLVNEALDIFSYM--------------KAKRIS---------PDIFTYNSLI 277

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
            G C      +A  +L +M      PN  ++   ++ +C  GK  EA+ +  T  E    
Sbjct: 278 QGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVE 337

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ +TYS +M+G     ++ EA  +   M+ KG  P     N+LI+  C+  ++D AK+ 
Sbjct: 338 PDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQL 397

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
             E +++G   + VN+ +LI G CQ G L EA  L  +M+     PD  TY+ ++D   K
Sbjct: 398 FNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCK 457

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA-- 584
            G + +A  L   M S  L P +  Y  +I   C+ G ++D  KL  ++  +        
Sbjct: 458 EGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQI 517

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           Y  +I NLC  G L+EA +    +       D  + +V++  +L
Sbjct: 518 YTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFL 561



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 225/476 (47%), Gaps = 31/476 (6%)

Query: 141 PIVYYM--MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           P +Y +  +++  S  +    A  V   M + G++     F+ L+    + GK   A+  
Sbjct: 128 PDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEF 187

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
               + +   P +    T I+ L    +   A    ++M+ AG  PNV+TYN LI   C 
Sbjct: 188 FDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCK 247

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH 315
              + +A+ +   M  K  SPD  +Y +++  LC  +R KE   L+ +M + +   N+F 
Sbjct: 248 DKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFT 307

Query: 316 ---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                     +G++ EA+ +   M++MG  PDVVTY++++ G+    E+ +A+K+   M 
Sbjct: 308 FNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMI 367

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             GCKP+  SY   + G C   +  EA+++ N    +  TP+ + Y+ ++HGL + G+L 
Sbjct: 368 TKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLR 427

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA D+ + M   G  P     ++L+   C+EG +  A +  +   +     ++  +  LI
Sbjct: 428 EAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILI 487

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
              C+ G+L++A  L  ++++    P+   YTTII+ L K G ++EA E    M   G  
Sbjct: 488 DAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCP 547

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAG 602
           P   +Y  +I  + Q                K + R A  Q+I  +   G++ EAG
Sbjct: 548 PDEFSYNVIIRGFLQY---------------KDESRAA--QLIGEMRDRGFVAEAG 586



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 157/329 (47%), Gaps = 13/329 (3%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           AL  F +  +  R   D   Y  +++ L   +  + A  +L  M    I      F+ L+
Sbjct: 254 ALDIFSYM-KAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLV 312

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
            A  + GK+  A  V   M +  V P+++  ++ ++   +  ++ +A +  + M   G  
Sbjct: 313 DAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCK 372

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+  +YN LIKGYC   RI +A +L +EM  +G +PD V+Y T++  LC+  R++E +DL
Sbjct: 373 PDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDL 432

Query: 304 MEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
            + M ++ NL            F  +G + +A  L   M      PD+  Y  +++  C+
Sbjct: 433 FKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCK 492

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            G L  A+K+  +++  G  PN   YT  +N LC  G   EA E     E +   P+  +
Sbjct: 493 FGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFS 552

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGF 440
           Y+V++ G  +    S A  ++ EM  +GF
Sbjct: 553 YNVIIRGFLQYKDESRAAQLIGEMRDRGF 581


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/587 (25%), Positives = 263/587 (44%), Gaps = 47/587 (8%)

Query: 122 RVALQFFYWADRQWRYRHDPIVYYMML--EILSKTKLCQGAKRVLR-------------- 165
           ++AL+F  W  +Q     D IV  + +   IL + ++   A+ +L+              
Sbjct: 91  KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFG 150

Query: 166 --LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
             +   R     P  +  L+  Y R G +++++ +  +M      P++  CN  +  +V 
Sbjct: 151 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 210

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
             +      FL+ M    I P+V T+N LI   C     + +  L+ +M   G +P  V+
Sbjct: 211 SGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT 270

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           Y TV+ + CK                       +GR + A EL++ M   G   DV TY 
Sbjct: 271 YNTVLHWYCK-----------------------KGRFKAAIELLDHMKSKGVDADVCTYN 307

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            +++  CR   + +   +L+ M      PN V+Y   +NG  + GK L A +++N     
Sbjct: 308 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 367

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
             +PN +T++ ++ G   EG   EA  +   M  KG  P+ V   +L+  LC+  + D A
Sbjct: 368 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 427

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           + F       G  V  + +T +I G C+ G L+EA+ LL++M     DPD VTY+ +I+ 
Sbjct: 428 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 487

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
             K GR + A E++ ++   GL P  + Y T+I+  C++G +++ +++ E M+ +   R 
Sbjct: 488 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 547

Query: 584 --AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              +N ++ +LC  G + EA + +  +       +  +   L+  Y N G  L A+ V  
Sbjct: 548 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 607

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
            M      P       + + L   G   EA+    +F++  H  P +
Sbjct: 608 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAE----KFLKSLHAVPAA 650



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 209/441 (47%), Gaps = 12/441 (2%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y    + Y  +L    K    + A  +L  M  +G++     ++ L+    R+ ++    
Sbjct: 264 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY 323

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M+K  + PN +  NT I+      K+  A + L  M   G++PN +T+N LI G+
Sbjct: 324 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 383

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
                 K+A+K+   M  KG +P +VSY  ++  LCK       R    +M  +      
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  +     G ++EA  L+N+MS+ G  PD+VTY+A++NGFC+VG    AK+++ +
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           +Y  G  PN + Y+  +   C  G   EA  +      E  T +  T++V++  L + GK
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           ++EA + +R M   G  P  V  + LI      G+   A     E    G       + S
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L++G C+ G L EA   L  ++      DTV Y T++ A+ K+G + +A  L  +M+ + 
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683

Query: 545 LVPTVVTYRTVIHRYCQVGRV 565
           ++P   TY ++I   C+ G+ 
Sbjct: 684 ILPDSYTYTSLISGLCRKGKT 704



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/554 (21%), Positives = 236/554 (42%), Gaps = 85/554 (15%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  M++ L K      A  +L  M++ GI+     +S L+  + + G+ + A  ++  
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503

Query: 202 MQKAAVAPNLLICNTAIH-------------------------------VLVV----GNK 226
           + +  ++PN +I +T I+                               VLV       K
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +A+A  F+  M   GI PN ++++CLI GY +      A  + DEM   G  P   +Y +
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623

Query: 287 VMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD-------QGRIEEAKELVNQMSQMG 334
           ++  LCK   ++E    ++ +       D+ +++         G + +A  L  +M Q  
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683

Query: 335 CIPDVVTYTAVVNGFCRVGE---------------------------LDQAKKMLQ---- 363
            +PD  TYT++++G CR G+                           +D   K  Q    
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 743

Query: 364 -----QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
                QM + G  P+ V+  A ++G    GK  +  +++     +   PN  TY++++HG
Sbjct: 744 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 803

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
             +   +S +  + R ++  G  P  +  + L+  +C    ++   K ++  + +G  V+
Sbjct: 804 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 863

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
              F  LI   C  G++  A  L+  M       D  T   ++  L++N R +E+  ++ 
Sbjct: 864 RYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH 923

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFG 596
           +M  +G+ P    Y  +I+  C+VG ++    + E+M++ + C    A + ++  L   G
Sbjct: 924 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 983

Query: 597 YLEEAGKILGKVLR 610
             +EA  +L  +L+
Sbjct: 984 KADEATLLLRFMLK 997



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/547 (21%), Positives = 227/547 (41%), Gaps = 56/547 (10%)

Query: 137  YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
            +  D   + +++  L K      A+  +R M   GI     +F  L+  Y  +G+   A 
Sbjct: 544  HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 603

Query: 197  YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             V   M K    P      + +  L  G  L +A +FL+ +       + + YN L+   
Sbjct: 604  SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 663

Query: 257  CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
            C    +  A+ L  EM  +   PD  +Y +++  LC++ +        ++     N+  +
Sbjct: 664  CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 723

Query: 317  Q-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            +             G+ +       QM  +G  PD+VT  A+++G+ R+G++++   +L 
Sbjct: 724  KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 783

Query: 364  QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            +M +    PN  +Y   L+G         +  +  +       P+ +T   ++ G+    
Sbjct: 784  EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 843

Query: 424  KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA------- 476
             L     +++  + +G        N+LI   C  G+++ A   ++   + G +       
Sbjct: 844  MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 903

Query: 477  --VNVVN--------------------------FTSLIRGFCQKGDLEEALSLLDDMYLC 508
              V+V+N                          +  LI G C+ GD++ A  + ++M   
Sbjct: 904  AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 963

Query: 509  KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
            K  P  V  + ++ AL+K G+ +EAT L+  ML   LVPT+ ++ T++H  C+ G V + 
Sbjct: 964  KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 1023

Query: 569  LKLLEKMLSKQKCR-----TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
            L+L   M     C       +YN +I  LC+ G +  A ++  ++      A+A+T   L
Sbjct: 1024 LELRVVM---SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKAL 1080

Query: 624  VESYLNK 630
            +   L +
Sbjct: 1081 IRGLLAR 1087



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 204/468 (43%), Gaps = 17/468 (3%)

Query: 124  ALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
             L+ F   D   +  H P    Y  +L+ L K    + A++ L+ +           ++ 
Sbjct: 599  GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658

Query: 182  LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
            L+ A  ++G L  A+ +   M + ++ P+     + I  L    K   A+ F +  +  G
Sbjct: 659  LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718

Query: 242  -ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
             + PN + Y C + G     + K  I   ++M   G +PD V+   ++    +  +I++ 
Sbjct: 719  NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 778

Query: 301  RDLMEKMVNDSN---------LFHDQGR---IEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             DL+ +M N +          L H   +   +  +  L   +   G +PD +T  ++V G
Sbjct: 779  NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 838

Query: 349  FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
             C    L+   K+L+     G + +  ++   ++  C NG+   A +++        + +
Sbjct: 839  ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898

Query: 409  AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
              T   ++  L R  +  E+  V+ EM K+G  P   +   LI  LCR G +  A    +
Sbjct: 899  KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 958

Query: 469  ECL-NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            E + +K C  NV   ++++R   + G  +EA  LL  M   K  P   ++TT++    KN
Sbjct: 959  EMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 1017

Query: 528  GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            G V EA EL + M + GL   +V+Y  +I   C  G +    +L E+M
Sbjct: 1018 GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1065


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 164/618 (26%), Positives = 269/618 (43%), Gaps = 35/618 (5%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKT-------- 154
           L SL P Q  +V  S       L    +  R+  + + P  +  +   L           
Sbjct: 257 LASLTPAQAASVAESHPIAARGLDLLLFLSRERSHSYRPGTFAALARRLVDARRYAAAGR 316

Query: 155 ------KLCQGAKRVLRLMA------RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
                 K C   + + R M+      + G+     A+S L++  SR G     M     M
Sbjct: 317 ARIHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRM 376

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
               V PNLLI N  I+ L     +A A   ++++  + ++P+  TY  +I G+C  H +
Sbjct: 377 LSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDL 436

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL--------- 313
             A+++ ++M  +GC P+ V+Y T++  LC   R+ E  DL+ +M+    L         
Sbjct: 437 DSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGP 496

Query: 314 ---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                D G  E+A  L   M   GC P+V TYTA+++G C  G L  A  +  +M   G 
Sbjct: 497 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 556

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PNTV+Y A +N L  N +   A  ++N         N +TY+ ++ G    G   +A  
Sbjct: 557 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAML 616

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           V+  M+++G     V  N +I+  C  G    A + +    + GC  +  ++T LI GFC
Sbjct: 617 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 676

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +   +E A  L ++M      P+ VTYT +ID   K+ +++ AT L+  M   G  P V 
Sbjct: 677 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 736

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKV 608
           TY  +IH   +        +L + M+ +        Y  +I+ LC  G    A ++  K+
Sbjct: 737 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 796

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
           +      +  T   L+ +   +G    A  +   +    LIPD     K+ E  I+ GK 
Sbjct: 797 IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 856

Query: 669 EEADTLMLRFVERGHIQP 686
           E A   + R ++ G  QP
Sbjct: 857 EHAFNFLGRMIKAG-CQP 873



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 217/440 (49%), Gaps = 40/440 (9%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A R+   M  +G  C P  ++Y  L+     +G L+ A+ +   M +  V PN +  N  
Sbjct: 509 AWRLFVDMKNKG--CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 566

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I++LV   ++  A   L  M   G+  N++TYN +IKGYC L   K A+ +++ M  +G 
Sbjct: 567 INILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 626

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
           S + V+Y T++   C                       D G    A  +++ M   GC P
Sbjct: 627 SANLVTYNTIIKGYC-----------------------DSGNTTSALRILDLMRDGGCKP 663

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D  +YT ++ GFC++ +++ A  +  +M   G  PN V+YTA ++G C + K   A  ++
Sbjct: 664 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 723

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
              +     PN  TY+V++HGL ++   S A ++ + M+++G FP  V    +I  LC+ 
Sbjct: 724 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 783

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G    A +   + + +GC  N++ ++SLIR   Q+G +EEA +L  ++      PD +TY
Sbjct: 784 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 843

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
             +I+A   +G+VE A   + +M+  G  PT+ TY  +I                E +L+
Sbjct: 844 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN-----------EYLLA 892

Query: 578 KQKCRTAYNQVIENLCSFGY 597
            Q+   A   V+ N CSFGY
Sbjct: 893 DQRL-AALPDVVPN-CSFGY 910



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 248/554 (44%), Gaps = 46/554 (8%)

Query: 143  VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
             Y  ++  L  + L + A  +   M+R G+      ++ L+       +++ A  VL++M
Sbjct: 527  TYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLM 586

Query: 203  QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
             +  +  N++  N  I    +     KA+  +  M   G + N++TYN +IKGYCD    
Sbjct: 587  GRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 646

Query: 263  KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----------- 311
              A++++D M   GC PD+ SY  ++   CK  +++    L  +MV+D            
Sbjct: 647  TSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTAL 706

Query: 312  -NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
             + +    +++ A  L+  M + GC P+V TY  +++G  +      A+++ + M   G 
Sbjct: 707  IDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 766

Query: 371  KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
             PN V+YTA ++GLC NG +  A EM N   E+   PN +TYS ++  L +EGK+ EA +
Sbjct: 767  FPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAEN 826

Query: 431  VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG-- 488
            +  E+ + G  P  +    +I++    GK++ A  F+   +  GC   +  +  LI+G  
Sbjct: 827  LFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLK 886

Query: 489  ---------------------FCQKGDLEEALSLLDDMYLCKKDP--DTVTYTTIIDALS 525
                                 F  +   ++A+S++    L + DP         ++  LS
Sbjct: 887  NEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMS-AKLAELDPGLSVQVQNALVSNLS 945

Query: 526  KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE--DLLKLLEKMLSKQKCR- 582
              GR  EA EL+  M+S+GL P    Y +++   C + RV   DL   + K +S Q C  
Sbjct: 946  TAGRWFEANELLGSMISQGLCPDQEAYNSLL---CSLLRVRNVDLAMGVFKHMSTQGCEV 1002

Query: 583  --TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
                Y ++I  LC     +EA      +L      D     VL++  L  G   L  +  
Sbjct: 1003 HLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFL 1062

Query: 641  CRMFNRNLIPDLKL 654
              M  R  +P   +
Sbjct: 1063 HIMETRRYMPSFHI 1076



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 182/370 (49%), Gaps = 11/370 (2%)

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           ++M   G  P+++ Y AV+N  C+ G +  A+ ++++++     P+T +YT+ + G C  
Sbjct: 374 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 433

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
                A ++ N   +E   PN +TYS +++GL   G+++EA D++REM+  G  PT    
Sbjct: 434 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTC 493

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
              I +LC  G  + A +   +  NKGC  NV  +T+LI G C  G L+ A+ L   M  
Sbjct: 494 TGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR 553

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+TVTY  +I+ L +N R++ A  ++  M   GL   +VTY  +I  YC +G  + 
Sbjct: 554 DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKK 613

Query: 568 LLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            + ++  ML +        YN +I+  C  G    A +IL  +     K D  +   L+ 
Sbjct: 614 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 673

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG--KSEEADTL--MLRFVER 681
            +        A+ +   M +  L P+     +V+   +++G  K E+ DT   +L  ++R
Sbjct: 674 GFCKISKMESAFGLFNEMVDDGLCPN-----EVTYTALIDGYCKDEKLDTATSLLEHMKR 728

Query: 682 GHIQPKSEEH 691
              +P  + +
Sbjct: 729 SGCRPNVQTY 738



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 93/420 (22%), Positives = 175/420 (41%), Gaps = 41/420 (9%)

Query: 142  IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
            + Y  +++   K +    A  +L  M R G  CRP   +Y  L+   ++      A  + 
Sbjct: 701  VTYTALIDGYCKDEKLDTATSLLEHMKRSG--CRPNVQTYNVLIHGLTKQNNFSGAEELC 758

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +M +  + PN++     I  L      + AL    +M   G  PN+LTY+ LI+     
Sbjct: 759  KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 818

Query: 260  HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             ++++A  L  E+   G  PD+++Y                     KM+     +   G+
Sbjct: 819  GKVEEAENLFAELERHGLIPDEITYV--------------------KMI---EAYIMSGK 855

Query: 320  IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            +E A   + +M + GC P + TY  ++ G     E   A + L  +      P+ V   +
Sbjct: 856  VEHAFNFLGRMIKAGCQPTLWTYGVLIKGL--KNEYLLADQRLAAL------PDVVPNCS 907

Query: 380  FLNGLCHNGKSLEAREMINTSEEEWWTPNAI-TYSVVMHGLRREGKLSEACDVVREMVKK 438
            F     +     +A  +++    E     ++   + ++  L   G+  EA +++  M+ +
Sbjct: 908  F----GYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 963

Query: 439  GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
            G  P     N L+ SL R   +D A    +    +GC V++  +  LI   CQ    +EA
Sbjct: 964  GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 1023

Query: 499  LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
                ++M +   +PD V    +ID L ++G  +   E +  M ++  +P+   Y T++ R
Sbjct: 1024 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIY-TILAR 1082


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/517 (27%), Positives = 248/517 (47%), Gaps = 27/517 (5%)

Query: 138 RHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           RH P  I +  +L  L K K       + + M  +GI       S L+  +   G++  +
Sbjct: 5   RHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFS 64

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             VL  + K    PN +I NT +  L +  ++ K+L F +++   G   + ++Y  L+ G
Sbjct: 65  FSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNG 124

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
            C +   + AIKL+  +  +   PD V Y T++  LCK+K +                  
Sbjct: 125 LCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLV------------------ 166

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
                +EA +L ++M+  G  PDV+TYT ++ GFC  G+L +A  +L +M      PN  
Sbjct: 167 -----DEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIY 221

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y   ++ LC  GK  E++ ++    ++   P+ + YS++M G    G++ +A  +   M
Sbjct: 222 TYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVM 281

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           V+ G  P     N++I  LC+  ++D A   ++E L+K    + V ++SLI G C+ G +
Sbjct: 282 VQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRI 341

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
              L L  +M+   +  + VTY +++D L KN  +++A  L MKM  +G+ P   TY  +
Sbjct: 342 TTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTAL 401

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I   C+ GR++    L + +L K  C     Y  +I  LC  G  +EA  +  K+     
Sbjct: 402 IDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGC 461

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
             +A T  +++ S L K     A K+   M  + L+P
Sbjct: 462 IPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 198/413 (47%), Gaps = 27/413 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA-GKLRNA 195
           ++ D + Y ++L  L K    + A ++LR +  R    RP+   Y  +       KL + 
Sbjct: 111 FQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDR--STRPDVVMYSTIIDGLCKDKLVDE 168

Query: 196 MYVL-SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
            Y L S M    + P+++   T I    +  +L +A   L  M L  I PN+ TYN LI 
Sbjct: 169 AYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLID 228

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
             C   ++K++  L+  M  KG  PD V Y  +M   C                      
Sbjct: 229 TLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCL--------------------- 267

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G +++AK++   M Q G  PDV +Y  ++NG C+   +D+A  +L++M H    P+T
Sbjct: 268 --VGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDT 325

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y++ ++GLC  G+     ++           N +TY+ ++ GL +   L +A  +  +
Sbjct: 326 VTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMK 385

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M ++G  P       LI  LC+ G++   +   Q  L KG  ++V  +T +I G C++G 
Sbjct: 386 MKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGM 445

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            +EAL++   M      P+ VT+  II +L +    ++A +L+ +M++KGL+P
Sbjct: 446 FDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 179/364 (49%), Gaps = 3/364 (0%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L  QM   G +PD+VT + ++N FC +G++  +  +L ++   G +PNT+     + GL
Sbjct: 31  SLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGL 90

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  G+  ++    +    + +  + ++Y ++++GL + G+   A  ++R +  +   P  
Sbjct: 91  CLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDV 150

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  + +I  LC++  +D A     E   +G   +V+ +T+LI GFC  G L EA  LL++
Sbjct: 151 VMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNE 210

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M L   +P+  TY T+ID L K G+V+E+  L+  M  KG+ P VV Y  ++  YC VG 
Sbjct: 211 MILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGE 270

Query: 565 VEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           V+   ++   M+         +YN +I  LC    ++EA  +L ++L      D  T   
Sbjct: 271 VQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSS 330

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L++     G       +   M +R    +L     + + L      ++A  L ++  ERG
Sbjct: 331 LIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERG 390

Query: 683 HIQP 686
            IQP
Sbjct: 391 -IQP 393



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/248 (20%), Positives = 111/248 (44%), Gaps = 3/248 (1%)

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  +E   ++ SL +           ++   KG   ++V  + LI  FC  G +  + S
Sbjct: 7   IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           +L  +      P+T+   T++  L   G V+++     K++++G     V+Y  +++  C
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 561 QVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           ++G     +KLL  +   S +     Y+ +I+ LC    ++EA  +  ++       D  
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           T   L+  +   G  + A+ +   M  +N+ P++     + + L  EGK +E+  L+   
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246

Query: 679 VERGHIQP 686
            ++G ++P
Sbjct: 247 TKKG-VKP 253



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 2/180 (1%)

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M L +  P  + +  I+ +L K         L  +M +KG+VP +VT   +I+ +C +G+
Sbjct: 1   MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60

Query: 565 VEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           +     +L K+  L  Q      N +++ LC  G ++++     KV+    + D  +  +
Sbjct: 61  MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L+      G    A K+   + +R+  PD+ +   + + L  +   +EA  L      RG
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARG 180


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 169/641 (26%), Positives = 276/641 (43%), Gaps = 69/641 (10%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR------- 165
           A+++ + D + AL+FF  A  +  +RH    Y ++  IL        A+ V++       
Sbjct: 100 ALVKLKGDPKSALKFFKEAGARAGFRHAAESYCVLAHILFCGMFYLDARSVIKEWILLGR 159

Query: 166 ----------LMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI 213
                     L + R + CRP    F  L       G L  A      M K  V P +  
Sbjct: 160 EFPGCDFFDMLWSTRNV-CRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRS 218

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN----------------------- 250
           CN  +H L   +K   AL F + M +AG++P+V TYN                       
Sbjct: 219 CNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMK 278

Query: 251 ------------CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
                        LI GY  +  +  A+ + +EM   GC PD ++Y +++   CK +RI 
Sbjct: 279 AKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIP 338

Query: 299 EV---------RDLMEKMVNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           +          R L   +V  S L   F   G + EA +    M ++G  P+  TYT+++
Sbjct: 339 QAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLI 398

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C++G+L++A K+  +M   G   N V+YTA L+GLC +G+  EA E+     +  WT
Sbjct: 399 DANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWT 458

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            N   Y+ + HG  +   + +A D++ EM KK   P  +     I  LCR+ +++ +   
Sbjct: 459 LNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAV 518

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           ++E ++ G   N   +T+LI  + + G   EA++LL +M         VTY  +ID L K
Sbjct: 519 IREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCK 578

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTA 584
            G V++A      M   GL P ++ Y  +I   C+   +E+   L  +ML K     +  
Sbjct: 579 IGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLV 638

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           Y  +I+     G   EA  +  +++    + D      L+  +   G   LA  +   M 
Sbjct: 639 YTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEML 698

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ 685
            + +IPD  LC  +  +    G   EA  L      RG I 
Sbjct: 699 RKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLIS 739



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 199/442 (45%), Gaps = 22/442 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  ++    K +    A   L  M +RG++     +S L+ A+ +AG L  A    
Sbjct: 320 DVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFF 379

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  + PN     + I        L +A +    MQ AG+  N++TY  L+ G C+ 
Sbjct: 380 VDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCED 439

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD--- 316
            R+++A +L   +   G + ++  Y ++     K K +++  D++E+M N  NL  D   
Sbjct: 440 GRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEM-NKKNLKPDLLL 498

Query: 317 ----------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                     Q  IE++  ++ +M   G   +   YT +++ + +VG+  +A  +LQ+M 
Sbjct: 499 YGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQ 558

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G K   V+Y   ++GLC  G   +A    +        PN + Y+ ++ GL +   L 
Sbjct: 559 DLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLE 618

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA ++  EM+ KG  P  +    LI    + G    A       +  G  +++  +TSLI
Sbjct: 619 EAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLI 678

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL- 545
            GF + G ++ A SLLD+M      PD V    ++    + G + EA  L   M  +GL 
Sbjct: 679 WGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLI 738

Query: 546 -------VPTVVTYRTVIHRYC 560
                  VP+ +T  T +H+ C
Sbjct: 739 SGTIDITVPSCLTAVTKLHKLC 760


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 243/546 (44%), Gaps = 61/546 (11%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            F  L+  Y +A KLR       +++      ++  CN+ +  LV  + +  A      +
Sbjct: 50  VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV 109

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
             +GI  NV T N ++   C   +  D    + EM   G   D V+Y T++G  C+E   
Sbjct: 110 VRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE--- 166

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                               G +EEA E++N M+  G  P + TY A++NG C+ G   +
Sbjct: 167 --------------------GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR 206

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT------ 411
           AK +L +M + G  P+T +Y   L   C      EA+E+      +   P+ ++      
Sbjct: 207 AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIA 266

Query: 412 -----------------------------YSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
                                        Y+V+MHG  R G + EA  +  EM+++G   
Sbjct: 267 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 326

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             +  N ++  LC+E  +  A K   E + +G   +   FT+LI G CQ G++ +ALSL 
Sbjct: 327 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 386

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
             M      PD V Y T+ID   K G +E+A+EL   M+S+ + P  +TY  +I+ YC V
Sbjct: 387 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 446

Query: 563 GRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           G V +  +L + M+ K  +      N VI+  C  G   +A + LG+++      D  + 
Sbjct: 447 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISY 506

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
           + L+  ++ +     A+    +M    L+PD+     V      +G+ +EA+ ++ + +E
Sbjct: 507 NTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIE 566

Query: 681 RGHIQP 686
           +G I P
Sbjct: 567 KG-INP 571



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 140/561 (24%), Positives = 252/561 (44%), Gaps = 49/561 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + +V+ +++    + +  +      R++  +G      A + L+    +   +  A  V 
Sbjct: 47  NNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH 106

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + ++ +  N+   N  ++ L    K      FL  M+  GI  +++TYN LI  YC  
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
             +++A ++++ M  KG  P   +Y  ++  LCK+ R    + ++ +M+N     D+  +
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 315 HD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +        +    EAKE+  +M + G +PD+V++++++  F R   LDQA    + M  
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+ V YT  ++G C NG  LEA ++ +   E+    + I Y+ +++GL +E  L++
Sbjct: 287 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTD 346

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +  EMV++G  P       LI   C++G M  A         +    ++V + +LI 
Sbjct: 347 ADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 406

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC+ G++E+A  L D M   K  P+ +TY  +I+A    G V EA  L   M+ KG+ P
Sbjct: 407 GFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKP 466

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR------------------------- 582
           T+VT  TVI  YC+ G      + L +M++K                             
Sbjct: 467 TLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWI 526

Query: 583 ------------TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
                         YN V+   C  G ++EA  +L K++      D ST   L+  ++ +
Sbjct: 527 NKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQ 586

Query: 631 GIPLLAYKVACRMFNRNLIPD 651
                A++    M  R   PD
Sbjct: 587 DNLNEAFRFHDEMLQRGFAPD 607



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 238/510 (46%), Gaps = 23/510 (4%)

Query: 130 WADRQWRYRHDPI-------VYYM--MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
           W +  W    + +       VY +  M+  L K       K  L  M   GI      ++
Sbjct: 98  WVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYN 157

Query: 181 YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
            L+ AY R G L  A  +++ M    + P+L   N  I+ L    + A+A   L  M   
Sbjct: 158 TLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNI 217

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G++P+  TYN L+   C      +A ++  EM  +G  PD VS+ +++    + + + + 
Sbjct: 218 GLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQA 277

Query: 301 ----RDLMEKMVNDSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
               RD+ +  +   N+ +          G + EA ++ ++M + GC+ DV+ Y  ++NG
Sbjct: 278 LVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNG 337

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
            C+   L  A K+  +M   G  P+  ++T  ++G C +G   +A  +  T  +    P+
Sbjct: 338 LCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPD 397

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
            + Y+ ++ G  + G++ +A ++   M+ +  FP  +   +LI + C  G +  A +   
Sbjct: 398 IVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWD 457

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
             + KG    +V   ++I+G+C+ GD  +A   L  M      PD ++Y T+I+   +  
Sbjct: 458 VMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVRED 517

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYN 586
            +++A   + KM  +GL+P ++TY  V++ +C+ GR+++   +L KM+ K     R+ Y 
Sbjct: 518 NMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYT 577

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            +I    +   L EA +   ++L+     D
Sbjct: 578 ALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 175/368 (47%), Gaps = 12/368 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           AK +   M R+G+     +FS L+  +SR   L  A+     M+K  + P+ +I    +H
Sbjct: 242 AKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMH 301

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +AL+  + M   G   +V+ YN ++ G C    + DA KL DEM  +G  P
Sbjct: 302 GYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALP 361

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
           D  ++ T++   C++  + +   L   M   +            + F   G +E+A EL 
Sbjct: 362 DFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELW 421

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           + M      P+ +TY  ++N +C VG + +A ++   M   G KP  V+    + G C +
Sbjct: 422 DGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRS 481

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G S +A E +     +   P+ I+Y+ +++G  RE  + +A   + +M K+G  P  +  
Sbjct: 482 GDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITY 541

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N+++   CR+G+M  A+  +++ + KG   +   +T+LI G   + +L EA    D+M  
Sbjct: 542 NVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQ 601

Query: 508 CKKDPDTV 515
               PD V
Sbjct: 602 RGFAPDDV 609



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 156/368 (42%), Gaps = 19/368 (5%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           R+ +A+ L+ +M +   +  V    A+V+  C                   C  N + + 
Sbjct: 10  RLSDAQALILRMIRRSGVSRVEVVEALVSSMC-----------------GNCGTNNLVFD 52

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             +       K  E  E       + +  +    + ++ GL +   +  A +V RE+V+ 
Sbjct: 53  LLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRS 112

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G       +N+++ +LC++GK D  K F+ E    G   ++V + +LI  +C++G LEEA
Sbjct: 113 GIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEA 172

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             +++ M      P   TY  II+ L K GR   A  ++++ML+ GL P   TY T++  
Sbjct: 173 FEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVE 232

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            C+     +  ++  +ML +       +++ +I       +L++A      + +     D
Sbjct: 233 SCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPD 292

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
                VL+  Y   G  L A K+   M  +  + D+     +   L  E    +AD L  
Sbjct: 293 NVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFD 352

Query: 677 RFVERGHI 684
             VERG +
Sbjct: 353 EMVERGAL 360


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 235/512 (45%), Gaps = 32/512 (6%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R+ I C   +F+ L+  +    KL  A+     + K  + P+++   T +H L + ++
Sbjct: 107 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHR 166

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++AL    ++      P+VLT+  L+ G C   R+ +A+ L+D M   G  PD+++Y T
Sbjct: 167 VSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGT 222

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQM 333
            +  +CK        +L+ KM   S++  +              GR  ++  L  +M   
Sbjct: 223 FVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDK 282

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  P++VTY  ++ GFC  G    A+++LQ+M      PN V+Y A +N     GK  EA
Sbjct: 283 GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEA 342

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            E+ +        PN ITY+ ++ G  ++ +L  A D+   M  KG  P       LI  
Sbjct: 343 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C   ++D   + + E   +G   N V + +LI GFC  GDL  AL L   M      PD
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSK------------GLVPTVVTYRTVIHRYCQ 561
            VT  T++D L  NG++++A E M K + K            G+ P V+TY  +I     
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALE-MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 521

Query: 562 VGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G+  +  +L E+M  +        Y+ +I+ LC    L+EA ++   +   +   +  T
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 581

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            + L+  Y   G      ++ C M  R ++ D
Sbjct: 582 FNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/513 (26%), Positives = 258/513 (50%), Gaps = 25/513 (4%)

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           L +A+ + S M ++   P+++  N  +  +V   +    +   ++M+   I  ++ ++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LIK +C   ++  A+    ++   G  PD V++ T++  LC + R+ E  DL  ++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 312 --------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   N    +GR+ EA  L+++M + G  PD +TY   V+G C++G+   A  +L+
Sbjct: 182 VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241

Query: 364 QMYH-HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           +M      KPN V Y+A ++GLC +G+  ++  +    +++   PN +TY+ ++ G    
Sbjct: 242 KMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCIS 301

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G+ S A  +++EM+++   P  V  N LI +  +EGK   A +   E L +G   N + +
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            S+I GFC++  L+ A  +   M      PD  T+TT+ID      R+++  EL+ +M  
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEE 600
           +GLV   VTY T+IH +C VG +   L L ++M+S   C      N +++ LC  G L++
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481

Query: 601 AGKILGKVLRTASKADAS-----------TCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           A ++   + ++    DAS           T ++L+   +N+G  L A ++   M +R ++
Sbjct: 482 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV 541

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           PD      + + L  + + +EA  +   FV  G
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQM---FVSMG 571



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 221/468 (47%), Gaps = 34/468 (7%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            D   AL      +     + + ++Y  +++ L K      +  +   M  +GI      
Sbjct: 231 GDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVT 290

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ ++  +  +G+   A  +L  M +  ++PN++  N  I+  V   K  +A    + M 
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML 350

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             GI PN +TYN +I G+C   R+  A  +   M  KGCSPD  ++ T++   C  KRI 
Sbjct: 351 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI- 409

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                                 ++  EL+++M + G + + VTY  +++GFC VG+L+ A
Sbjct: 410 ----------------------DDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE-----------WWTP 407
             + QQM   G  P+ V+    L+GLC NGK  +A EM    ++               P
Sbjct: 448 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 507

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           + +TY++++ GL  EGK  EA ++  EM  +G  P  +  + +I  LC++ ++D A +  
Sbjct: 508 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
               +K  + NVV F +LI G+C+ G +++ L L  +M       D + Y T+I    K 
Sbjct: 568 VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKV 627

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           G +  A ++  +M+S G+ P  +T R ++  +     +E  + +LE +
Sbjct: 628 GNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 216/466 (46%), Gaps = 61/466 (13%)

Query: 174 CRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           CRP+   F+ LM    R G++  A+ +L  M +  + P+ +   T +  +        AL
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 232 RFLERMQ-LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
             L +M+ ++ I PNV+ Y+ +I G C   R  D+  L  EM  KG  P+ V+Y  ++G 
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
            C   R    + L+++M+               N F  +G+  EA EL ++M   G IP+
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            +TY ++++GFC+   LD A+ M   M   GC P+  ++T  ++G C   +  +  E+++
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                    N +TY+ ++HG    G L+ A D+ ++M+  G  P  V  N L+  LC  G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 459 KMDGA----------------------------------------KKFMQ------ECLN 472
           K+  A                                         KF++      E  +
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +G   + + ++S+I G C++  L+EA  +   M      P+ VT+ T+I+   K GRV++
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 597

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
             EL  +M  +G+V   + Y T+I+ + +VG +   L + ++M+S 
Sbjct: 598 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 643



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 227/502 (45%), Gaps = 74/502 (14%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---- 307
           L  G  ++  ++DAI L  +M      P  + +  +MG + + +R   V  L +KM    
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 308 ----------------------------------------VNDSNLFHD---QGRIEEAK 324
                                                   V  + L H      R+ EA 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +L +Q+    C PDV+T+T ++NG CR G + +A  +L +M  +G +P+ ++Y  F++G+
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 385 CHNGKSLEAREMINTSEE-EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           C  G ++ A  ++   EE     PN + YS ++ GL ++G+ S++ ++  EM  KG FP 
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V  N +I   C  G+   A++ +QE L +  + NVV + +LI  F ++G   EA  L D
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M      P+T+TY ++ID   K  R++ A ++   M +KG  P V T+ T+I  YC   
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 407

Query: 564 RVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           R++D ++LL +M  +        YN +I   C  G L  A  +  +++ +    D  TC+
Sbjct: 408 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 467

Query: 622 VLVESYLNKGIPLLAYKVACRMFN---------------RNLIPDLKLCKKVSERLILEG 666
            L++   + G      K A  MF                  + PD+     +   LI EG
Sbjct: 468 TLLDGLCDNG----KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 523

Query: 667 KSEEADTLMLRFVERGHIQPKS 688
           K  EA+ L      RG I P +
Sbjct: 524 KFLEAEELYEEMPHRG-IVPDT 544



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 187/373 (50%), Gaps = 23/373 (6%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
             A+R+L+ M  R I      ++ L+ A+ + GK   A  +   M    + PN +  N+ 
Sbjct: 305 SAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSM 364

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I      ++L  A      M   G +P+V T+  LI GYC   RI D ++L+ EMP +G 
Sbjct: 365 IDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 424

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
             + V+Y T++   C    +    DL ++M++              +   D G++++A E
Sbjct: 425 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 484

Query: 326 LVNQM--SQM---------GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
           +   M  S+M         G  PDV+TY  ++ G    G+  +A+++ ++M H G  P+T
Sbjct: 485 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           ++Y++ ++GLC   +  EA +M  +   + ++PN +T++ +++G  + G++ +  ++  E
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCE 604

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M ++G     +    LI    + G ++GA    QE ++ G   + +   +++ GF  K +
Sbjct: 605 MGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 664

Query: 495 LEEALSLLDDMYL 507
           LE A+++L+D+ +
Sbjct: 665 LERAVAMLEDLQM 677


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 159/628 (25%), Positives = 285/628 (45%), Gaps = 47/628 (7%)

Query: 99  LRNLLRSLKPRQICAVLRSQAD--ERVALQFFYWADR-QWRYRHDPIVYYMMLEIL---- 151
            + L+ +L P  + ++  +  D    +ALQFF      +  ++H    +  +L+IL    
Sbjct: 75  FQKLIPNLSPSHVSSLFNNHPDLNPNIALQFFNSLPLIKPGFKHTVKSHSFLLKILIPNN 134

Query: 152 ----------SKTKLCQGAKRV------LRLMAR--RGIECRPEAFSY--LMVAYSRAGK 191
                     S  K C     +      LR M R    I+ +    SY  L++  +R   
Sbjct: 135 LFGVGEKIRISMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLM 194

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +     V + M    + PN+   NT ++       + +A  ++ ++  AG++P+  TY  
Sbjct: 195 IDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTS 254

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI GYC  + +  A K+ + MP KGC  ++VSY T++  LC+  RI E   L +KM  D 
Sbjct: 255 LILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDD 314

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                       +      R  E  +L N+M +  C P+V TYT +V+  C+  +LD+++
Sbjct: 315 CYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESR 374

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++L +M   G  P+ V+Y A + G C  G+   A E++   E     PN  TY+ ++ G 
Sbjct: 375 RILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGF 434

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            +   + +A  ++ +M++    P+ V  N LI   C+ G  D A K +      G   + 
Sbjct: 435 SKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQ 494

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
             ++  I   C+   +EEA  L + +       + V YT +ID   K G+++EA  L+ +
Sbjct: 495 WTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLER 554

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGY 597
           M S+  +P   TY ++I+  C+ G+V++ L ++E M  +  +     Y  +IE +   G 
Sbjct: 555 MHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGD 614

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD---LKL 654
            + A ++  +++    K D  T    + +Y   G    A  +  RM    ++PD     L
Sbjct: 615 FDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTL 674

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERG 682
                ERL   G + +A  ++ R ++ G
Sbjct: 675 LISAYERL---GLAYDAFNVLKRMLDAG 699



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 203/398 (51%), Gaps = 14/398 (3%)

Query: 173 ECRPEAFSYLMVAYSRAGKLRN--AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           +C P   +Y ++ ++  G  RN   M + + M++ +  PN+      +  +    KL ++
Sbjct: 314 DCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDES 373

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
            R L  M   G+ P+V+TYN LI+GYC+  RI+ A++++  M    C P++ +Y  ++  
Sbjct: 374 RRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICG 433

Query: 291 LCKEKRIKEVRDLMEKM---------VNDSNLFHDQ---GRIEEAKELVNQMSQMGCIPD 338
             K K + +   L+ KM         V  ++L H Q   G  + A +L++ + + G +PD
Sbjct: 434 FSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPD 493

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
             TY+  ++  C+   +++A  +   +   G K N V YTA ++G C  GK  EA  ++ 
Sbjct: 494 QWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLE 553

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
               E   PN+ TY+ +++G+ +EGK+ E   +V  M K G  PT     +LI+ + REG
Sbjct: 554 RMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREG 613

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
             D A +   + ++ G   +V  +T+ I  +C  G+++EA  ++  M      PD++TYT
Sbjct: 614 DFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYT 673

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            +I A  + G   +A  ++ +ML  G  P+   +  +I
Sbjct: 674 LLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 23/234 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y + ++ L K+K  + A  +   +  +GI+     ++ L+  + +AGK+  A+ +L
Sbjct: 493 DQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLL 552

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M      PN    N+ I+ +    K+ + L  +E M   G+ P V TY  LI+     
Sbjct: 553 ERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLRE 612

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
                A ++ ++M   G  PD  +Y   +   C    +KE   +M +M+           
Sbjct: 613 GDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMI----------- 661

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                       + G +PD +TYT +++ + R+G    A  +L++M   GC P+
Sbjct: 662 ------------EAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPS 703



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 52/124 (41%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M++ G++     ++ L+    R G   +A  V + M      P++      IH       
Sbjct: 590 MSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGN 649

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +A   + RM  AG+ P+ LTY  LI  Y  L    DA  ++  M   GC P    +  
Sbjct: 650 VKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNN 709

Query: 287 VMGY 290
           ++ Y
Sbjct: 710 LIWY 713


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/583 (26%), Positives = 261/583 (44%), Gaps = 63/583 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMAR-RGIECRPEAFSYLMV--AYSRAGKLRNAM 196
           D   Y  +L+ L      Q A  +L +MA  RG    P+  SY  V   + + G    A 
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAY 221

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
                M    + P+++  ++ I  L     + KA+  L  M   G+ P+ +TYN ++ GY
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 281

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   + K+AI  + +M   G  P+ V+Y ++M YLCK                       
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK----------------------- 318

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            GR  EA+++ + M++ G  PD+ TY  ++ G+   G L +   +L  M  +G +P+   
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           +   +       K  +A  + +   +    PN + Y  V+  L + G + +A     +M+
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            +G  P  +    LI  LC   K D A++ + E L++G  +N + F S+I   C++G + 
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 498

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           E+  L D M      PD +TY T+ID     G+++EAT+L+  M+S G+ P +VTY T+I
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558

Query: 557 HRYCQVGRVEDLLKLLEKMLSK-----------------QKCRTA--------------- 584
           + YC+V R++D L L ++M+S                     RTA               
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 618

Query: 585 -----YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                YN ++  LC     +EA ++   +  T  + +  T ++++ + L  G    A  +
Sbjct: 619 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL 678

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                   L+PD++    ++E LI +G  EE D L L   E G
Sbjct: 679 FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 153/611 (25%), Positives = 255/611 (41%), Gaps = 93/611 (15%)

Query: 101 NLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGA 160
           NLL+ L     C   RSQ  E + L      DR      D + Y  +L    K      A
Sbjct: 168 NLLKGL-----CDENRSQ--EALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKA 220

Query: 161 KRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
                 M  RGI      +S ++ A  +A  +  AM VL+ M K  V P+ +  N+ +H 
Sbjct: 221 YSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 280

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
                +  +A+  L++M+  G+ PNV+TY+ L+   C   R  +A K+ D M  +G  PD
Sbjct: 281 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFH-------DQGRIEEAKELVN 328
             +Y T++     +  + E+  L++ MV      D ++F+        Q ++++A  + +
Sbjct: 341 IATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFS 400

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL---- 384
           +M Q G  P+VV Y  V++  C+ G +D A    +QM   G  PN + YT+ ++GL    
Sbjct: 401 KMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCD 460

Query: 385 -------------------------------CHNGKSLEAREMINTSEEEWWTPNAITYS 413
                                          C  G+ +E+ ++ +        P+ ITY+
Sbjct: 461 KWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYN 520

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++ G    GK+ EA  ++  MV  G  P  V    LI   CR  +MD A    +E ++ 
Sbjct: 521 TLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 580

Query: 474 GCAVNVVNFTSLIRGF-----------------------------------CQKGDLEEA 498
           G + N++ +  +++G                                    C+    +EA
Sbjct: 581 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L +  ++ L     +T T+  +I AL K GR++EA +L     + GLVP V TY  +   
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
             + G +E+L  L   M  +  C       N ++  L   G +  AG  L  +       
Sbjct: 701 LIEQGSLEELDDLFLSM-EENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSL 759

Query: 616 DASTCHVLVES 626
           +AST   L+ES
Sbjct: 760 EASTASFLLES 770



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 177/399 (44%), Gaps = 44/399 (11%)

Query: 328 NQMSQMGC---IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           N+M++ G     P V TY  ++   CR G LD     L  +   G + + +++T  L GL
Sbjct: 78  NRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGL 137

Query: 385 CHNGKSLEAREMI--------------------------NTSEEEW-------------W 405
           C + ++ +A +++                          N S+E                
Sbjct: 138 CADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGS 197

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+ ++Y+ V++G  +EG   +A     EM+ +G  P  V  + +I +LC+   MD A +
Sbjct: 198 PPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAME 257

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            +   +  G   + + + S++ G+C  G  +EA+  L  M     +P+ VTY+++++ L 
Sbjct: 258 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLC 317

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
           KNGR  EA ++   M  +GL P + TYRT++  Y   G + ++  LL+ M+    Q    
Sbjct: 318 KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHH 377

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            +N +I        +++A  +  K+ +     +      +++     G    A     +M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +  L P++ +   +   L    K ++A+ L+L  ++RG
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 163/647 (25%), Positives = 289/647 (44%), Gaps = 43/647 (6%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVL---RSQA-DERVALQFFYW-- 130
           +  EV  L+  R A   KL     ++   L P  + +++   RS +   ++ L FFYW  
Sbjct: 49  VAAEVATLLS-RCAGDWKLAIAASDIPSRLSPDAVSSLIFGGRSHSLHPKLLLDFFYWSR 107

Query: 131 -------ADRQWRY-----------RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGI 172
                  AD   R            + + +++ M+L       +    +R ++    R  
Sbjct: 108 PRIAPPSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSR 167

Query: 173 ECRPEA--FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
              P       L+  Y + G +RNA  V+ MM    +AP    CN  +  L+  + +   
Sbjct: 168 SPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELL 227

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
            +    M+ AGI P+V TY+  I+ +C       A K+ +EM  + C+ ++V+Y  ++  
Sbjct: 228 WKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISG 287

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQ-------------GRIEEAKELVNQMSQMGCIP 337
           LC+   ++E     E+MV D  L  D               R++EAK L+++MS  G  P
Sbjct: 288 LCRSGAVEEAFGFKEEMV-DYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKP 346

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           ++V Y  +V+GF + G+  +A  +L++M   G +PN + Y   + GLC  G+   A +++
Sbjct: 347 NIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLL 406

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
               +    P+  TY+ +M G  ++     A +++ EM   G  P      ++I  LC+ 
Sbjct: 407 KEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQN 466

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G+   A   ++E +++G   N   +  LI G  ++G++  A   L+ M      PD   Y
Sbjct: 467 GESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCY 526

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
            ++I  LS  GR+EEA E   ++  +GLVP   TY  +IH YC+ G +E   +LL +ML+
Sbjct: 527 NSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLN 586

Query: 578 K--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
              +     Y  ++E        E+   IL  +L +  K D     +++ +        +
Sbjct: 587 SGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEV 646

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           A+ V   +    L+PDL +   +   L      E+A  L+    + G
Sbjct: 647 AFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEG 693



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 142/545 (26%), Positives = 256/545 (46%), Gaps = 13/545 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++  L K    + AK +L  M+  G++     +  L+  + + GK   A  +L
Sbjct: 312 DAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDIL 371

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M  A V PN ++ +  I  L    +L +A + L+ M   G+ P+  TYN L++G+   
Sbjct: 372 KEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQ 431

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLF-- 314
           H    A +L++EM   G  P+  SY  ++  LC+    KE  +L+E+M+++    N F  
Sbjct: 432 HDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMY 491

Query: 315 -------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +G I  A E + +M++    PD+  Y +++ G   VG +++A++   Q+  
Sbjct: 492 APLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQK 551

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+  +Y+  ++G C  G   +A +++         PNA TY+ ++ G  +     +
Sbjct: 552 RGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEK 611

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
              +++ M+  G  P      ++I++L R   M+ A   + E    G   ++  ++SLI 
Sbjct: 612 VSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLIS 671

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C+  D+E+A+ LLD+M     +P  V Y  +ID   ++G +  A  +   +L+KGLVP
Sbjct: 672 GLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVP 731

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY-NQVIENLCSFGYLEEAGKILG 606
             VTY  +I   C+ G + D   L ++ML +     A+   V+   CS     E    L 
Sbjct: 732 NCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLT 791

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
           + +     A+ S  + LV  +  +G      K+   M +R ++P+ +  +KV       G
Sbjct: 792 EEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAG 851

Query: 667 KSEEA 671
           K  EA
Sbjct: 852 KLGEA 856



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/532 (25%), Positives = 241/532 (45%), Gaps = 51/532 (9%)

Query: 171 GIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
           G    P+ ++Y   + A+ +A     A  V   M++   A N +  N  I  L     + 
Sbjct: 236 GAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVE 295

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           +A  F E M   G++P+  TY  L+ G C   R+K+A  L+DEM   G  P+ V Y T++
Sbjct: 296 EAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLV 355

Query: 289 GYLCKEKRIKEVRDLMEKM----VNDSNLFHDQ--------GRIEEAKELVNQMSQMGCI 336
               KE +  E  D++++M    V  + + +D         G++  A +L+ +M ++G  
Sbjct: 356 DGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLR 415

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PD  TY  ++ G  +  + D A ++L +M + G  PN  SY   +NGLC NG+S EA  +
Sbjct: 416 PDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNL 475

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +     E   PNA  Y+ ++ G  +EG +S AC+ + +M K    P     N LI+ L  
Sbjct: 476 LEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLST 535

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            G+M+ A+++  +   +G   +   ++ LI G+C+ G+LE+A  LL  M      P+  T
Sbjct: 536 VGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADT 595

Query: 517 YTTIIDALSKNGRVEEATELMMKMLS---------------------------------- 542
           YT +++   K+   E+ + ++  ML                                   
Sbjct: 596 YTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE 655

Query: 543 -KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLE 599
             GLVP +  Y ++I   C++  +E  + LL++M  +  +     YN +I+  C  G + 
Sbjct: 656 KNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDIS 715

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            A  +   +L      +  T   L++     G    A+ +   M +R + PD
Sbjct: 716 RARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPD 767


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 242/505 (47%), Gaps = 44/505 (8%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R+ I C   +F+ L+  +    KL  A+     + K  + P+++   T +H L V ++
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++AL    +M      PNV+T+  L+ G C   RI +A+ L+D M   G  P +++Y T
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  +CK+       +L+ KM             EE   +         IP+VV Y+A++
Sbjct: 225 IVDGMCKKGDTVSALNLLRKM-------------EEVSHI---------IPNVVIYSAII 262

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C+ G    A+ +  +M   G  P+  +Y + + G C +G+  +A +++    E   +
Sbjct: 263 DSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKIS 322

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ +TY+ +++   +EGK  EA ++  EM+ +G  P  +  + +I   C++ ++D A+  
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHM 382

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
                 KGC+ N++ F +LI G+C    +++ + LL +M       DT TY T+I     
Sbjct: 383 FYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYL 442

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN 586
            G +  A +L+ +M+S GL P +VT  T++   C  G+++D L++ + M   +K   A +
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
                                      + D  T ++L+   +N+G  L A ++   M +R
Sbjct: 503 PF----------------------NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 647 NLIPDLKLCKKVSERLILEGKSEEA 671
            ++PD      + + L  + + +EA
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEA 565



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 248/516 (48%), Gaps = 39/516 (7%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L   +     L +A+ + S M ++   P+++     + V+V   +    +   ++M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I  ++ ++N LIK +C   ++  A+    ++   G  PD V++ T++  LC E R+ E  
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                     NLFH             QM +  C P+VVT+T ++NG CR G + +A  +
Sbjct: 170 ----------NLFH-------------QMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE-EWWTPNAITYSVVMHGLR 420
           L +M   G +P  ++Y   ++G+C  G ++ A  ++   EE     PN + YS ++  L 
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           ++G+ S+A ++  EM +KG FP     N +I   C  G+   A++ +QE L +  + +VV
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +LI  F ++G   EA  L D+M      P+T+TY+++ID   K  R++ A  +   M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYL 598
            +KG  P ++T+ T+I  YC   R++D ++LL +M         T YN +I      G L
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGI---PLLAYKV---------ACRMFNR 646
             A  +L +++ +    D  TC  L++   + G     L  +KV         A   FN 
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN- 505

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            + PD++    +   LI EGK  EA+ L      RG
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 224/447 (50%), Gaps = 38/447 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           ++Y  +++ L K      A+ +   M  +GI   P+ F+Y  ++V +  +G+  +A  +L
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGI--FPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  ++P+++  N  I+  V   K  +A    + M   GI PN +TY+ +I G+C  
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           +R+  A  +   M  KGCSP+ +++ T++   C  KRI                      
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI---------------------- 411

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            ++  EL+++M++ G + D  TY  +++GF  VG+L+ A  +LQ+M   G  P+ V+   
Sbjct: 412 -DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470

Query: 380 FLNGLCHNGKSLEAREMINTSEEE-----------WWTPNAITYSVVMHGLRREGKLSEA 428
            L+GLC NGK  +A EM    ++               P+  TY++++ GL  EGK  EA
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            ++  EM  +G  P  +  + +I  LC++ ++D A +      +K  + NVV FT+LI G
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +C+ G +++ L L  +M       + +TY T+I    K G +  A ++  +M+S G+ P 
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            +T R ++        ++  + +LEK+
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 216/466 (46%), Gaps = 61/466 (13%)

Query: 174 CRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           CRP    F+ LM    R G++  A+ +L  M +  + P  +   T +  +        AL
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 232 RFLERMQ-LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
             L +M+ ++ I PNV+ Y+ +I   C   R  DA  L  EM  KG  PD  +Y +++  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
            C   R  +   L+++M+               N F  +G+  EA+EL ++M   G IP+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            +TY+++++GFC+   LD A+ M   M   GC PN +++   ++G C   +  +  E+++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE------------ 446
              E     +  TY+ ++HG    G L+ A D+++EM+  G  P  V             
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 447 ----------------------------------INLLIQSLCREGKMDGAKKFMQECLN 472
                                              N+LI  L  EGK   A++  +E  +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +G   + + ++S+I G C++  L+EA  + D M      P+ VT+TT+I+   K GRV++
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
             EL  +M  +G+V   +TY T+I  + +VG +   L + ++M+S 
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 229/463 (49%), Gaps = 24/463 (5%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---- 307
           L  G+ ++  ++DAI L  +M      P  V +  +MG + + +R   V  L +KM    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 308 ----VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
               +   N+    F    ++  A     +++++G  PDVVT+T +++G C    + +A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            +  QM+   C+PN V++T  +NGLC  G+ +EA  +++   E+   P  ITY  ++ G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 420 RREGKLSEACDVVREMVK-KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
            ++G    A +++R+M +     P  V  + +I SLC++G+   A+    E   KG   +
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +  + S+I GFC  G   +A  LL +M   K  PD VTY  +I+A  K G+  EA EL  
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSF 595
           +ML +G++P  +TY ++I  +C+  R+ D  + +  +++ + C      +N +I+  C  
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
             +++  ++L ++  T   AD +T + L+  +   G    A  +   M +  L PD+  C
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVF 698
             + + L   GK ++A       +E   +  KS++ L     F
Sbjct: 469 DTLLDGLCDNGKLKDA-------LEMFKVMQKSKKDLDASHPF 504


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/587 (25%), Positives = 263/587 (44%), Gaps = 47/587 (8%)

Query: 122 RVALQFFYWADRQWRYRHDPIVYYMML--EILSKTKLCQGAKRVLR-------------- 165
           ++AL+F  W  +Q     D IV  + +   IL + ++   A+ +L+              
Sbjct: 51  KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFG 110

Query: 166 --LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
             +   R     P  +  L+  Y R G +++++ +  +M      P++  CN  +  +V 
Sbjct: 111 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 170

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
             +      FL+ M    I P+V T+N LI   C     + +  L+ +M   G +P  V+
Sbjct: 171 SGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT 230

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           Y TV+ + CK                       +GR + A EL++ M   G   DV TY 
Sbjct: 231 YNTVLHWYCK-----------------------KGRFKAAIELLDHMKSKGVDADVCTYN 267

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            +++  CR   + +   +L+ M      PN V+Y   +NG  + GK L A +++N     
Sbjct: 268 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 327

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
             +PN +T++ ++ G   EG   EA  +   M  KG  P+ V   +L+  LC+  + D A
Sbjct: 328 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 387

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           + F       G  V  + +T +I G C+ G L+EA+ LL++M     DPD VTY+ +I+ 
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
             K GR + A E++ ++   GL P  + Y T+I+  C++G +++ +++ E M+ +   R 
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507

Query: 584 --AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              +N ++ +LC  G + EA + +  +       +  +   L+  Y N G  L A+ V  
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
            M      P       + + L   G   EA+    +F++  H  P +
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAE----KFLKSLHAVPAA 610



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 209/441 (47%), Gaps = 12/441 (2%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y    + Y  +L    K    + A  +L  M  +G++     ++ L+    R+ ++    
Sbjct: 224 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY 283

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M+K  + PN +  NT I+      K+  A + L  M   G++PN +T+N LI G+
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
                 K+A+K+   M  KG +P +VSY  ++  LCK       R    +M  +      
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  +     G ++EA  L+N+MS+ G  PD+VTY+A++NGFC+VG    AK+++ +
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           +Y  G  PN + Y+  +   C  G   EA  +      E  T +  T++V++  L + GK
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           ++EA + +R M   G  P  V  + LI      G+   A     E    G       + S
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L++G C+ G L EA   L  ++      DTV Y T++ A+ K+G + +A  L  +M+ + 
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643

Query: 545 LVPTVVTYRTVIHRYCQVGRV 565
           ++P   TY ++I   C+ G+ 
Sbjct: 644 ILPDSYTYTSLISGLCRKGKT 664



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 130/616 (21%), Positives = 255/616 (41%), Gaps = 90/616 (14%)

Query: 142  IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
            I Y  M++ L K      A  +L  M++ GI+     +S L+  + + G+ + A  ++  
Sbjct: 404  ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463

Query: 202  MQKAAVAPNLLICNTAIH-------------------------------VLVV----GNK 226
            + +  ++PN +I +T I+                               VLV       K
Sbjct: 464  IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523

Query: 227  LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
            +A+A  F+  M   GI PN ++++CLI GY +      A  + DEM   G  P   +Y +
Sbjct: 524  VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583

Query: 287  VMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD-------QGRIEEAKELVNQMSQMG 334
            ++  LCK   ++E    ++ +       D+ +++         G + +A  L  +M Q  
Sbjct: 584  LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643

Query: 335  CIPDVVTYTAVVNGFCR------------------------------------VGELDQA 358
             +PD  TYT++++G CR                                     G+    
Sbjct: 644  ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 703

Query: 359  KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
                +QM + G  P+ V+  A ++G    GK  +  +++     +   PN  TY++++HG
Sbjct: 704  IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 763

Query: 419  LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
              +   +S +  + R ++  G  P  +  + L+  +C    ++   K ++  + +G  V+
Sbjct: 764  YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823

Query: 479  VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
               F  LI   C  G++  A  L+  M       D  T   ++  L++N R +E+  ++ 
Sbjct: 824  RYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH 883

Query: 539  KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFG 596
            +M  +G+ P    Y  +I+  C+VG ++    + E+M++ + C    A + ++  L   G
Sbjct: 884  EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 943

Query: 597  YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
              +EA  +L  +L+       ++   L+      G  + A ++   M N  L  DL    
Sbjct: 944  KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL---- 999

Query: 657  KVSERLILEGKSEEAD 672
             VS  +++ G   + D
Sbjct: 1000 -VSYNVLITGLCAKGD 1014



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/547 (21%), Positives = 227/547 (41%), Gaps = 56/547 (10%)

Query: 137  YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
            +  D   + +++  L K      A+  +R M   GI     +F  L+  Y  +G+   A 
Sbjct: 504  HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 563

Query: 197  YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             V   M K    P      + +  L  G  L +A +FL+ +       + + YN L+   
Sbjct: 564  SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623

Query: 257  CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
            C    +  A+ L  EM  +   PD  +Y +++  LC++ +        ++     N+  +
Sbjct: 624  CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683

Query: 317  Q-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            +             G+ +       QM  +G  PD+VT  A+++G+ R+G++++   +L 
Sbjct: 684  KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 743

Query: 364  QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            +M +    PN  +Y   L+G         +  +  +       P+ +T   ++ G+    
Sbjct: 744  EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 803

Query: 424  KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA------- 476
             L     +++  + +G        N+LI   C  G+++ A   ++   + G +       
Sbjct: 804  MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 863

Query: 477  --VNVVN--------------------------FTSLIRGFCQKGDLEEALSLLDDMYLC 508
              V+V+N                          +  LI G C+ GD++ A  + ++M   
Sbjct: 864  AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923

Query: 509  KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
            K  P  V  + ++ AL+K G+ +EAT L+  ML   LVPT+ ++ T++H  C+ G V + 
Sbjct: 924  KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 983

Query: 569  LKLLEKMLSKQKCR-----TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
            L+L   M     C       +YN +I  LC+ G +  A ++  ++      A+A+T   L
Sbjct: 984  LELRVVM---SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKAL 1040

Query: 624  VESYLNK 630
            +   L +
Sbjct: 1041 IRGLLAR 1047



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 204/468 (43%), Gaps = 17/468 (3%)

Query: 124  ALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
             L+ F   D   +  H P    Y  +L+ L K    + A++ L+ +           ++ 
Sbjct: 559  GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 618

Query: 182  LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
            L+ A  ++G L  A+ +   M + ++ P+     + I  L    K   A+ F +  +  G
Sbjct: 619  LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678

Query: 242  -ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
             + PN + Y C + G     + K  I   ++M   G +PD V+   ++    +  +I++ 
Sbjct: 679  NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738

Query: 301  RDLMEKMVNDSN---------LFHDQGR---IEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             DL+ +M N +          L H   +   +  +  L   +   G +PD +T  ++V G
Sbjct: 739  NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798

Query: 349  FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
             C    L+   K+L+     G + +  ++   ++  C NG+   A +++        + +
Sbjct: 799  ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858

Query: 409  AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
              T   ++  L R  +  E+  V+ EM K+G  P   +   LI  LCR G +  A    +
Sbjct: 859  KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918

Query: 469  ECL-NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            E + +K C  NV   ++++R   + G  +EA  LL  M   K  P   ++TT++    KN
Sbjct: 919  EMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 977

Query: 528  GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            G V EA EL + M + GL   +V+Y  +I   C  G +    +L E+M
Sbjct: 978  GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 234/506 (46%), Gaps = 16/506 (3%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVV 223
            ++ R+ + C  + F+ L+ A  + G+  + +  LS  M+   ++PN+   +  ++    
Sbjct: 82  HMLHRKPLPCIIQ-FAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQ 140

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
             ++      L ++   G+ P ++T+  LI G C +     A++L D+M  KGC PD  +
Sbjct: 141 LQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYT 200

Query: 284 YYTVMGYLCKEKRIKEVRDLMEK---------MVNDSNLFHDQGR---IEEAKELVNQMS 331
           Y T++  LCK         L++K         MV  S L     R   + EA ++ + M 
Sbjct: 201 YNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMK 260

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
             G  PD+ TYT+++ G C+     +A  +L +M      P+ V++   ++  C  GK  
Sbjct: 261 AKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVS 320

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           EA  ++ T  E    PN +TYS +M+G      + EA  +   M+ KG  P     N+LI
Sbjct: 321 EALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILI 380

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
              C+  ++D A +   E +++G   N V++ +LI GFCQ G L EA  L  +M      
Sbjct: 381 NGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNL 440

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD  TY+ ++D   K G + +A  L   M S  L P +V Y  ++H  C+ G  +D  KL
Sbjct: 441 PDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKL 500

Query: 572 LEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
             ++  +  Q     Y  +I  LC  G L+EA +    +       D  + +V++   L 
Sbjct: 501 FSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQ 560

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLC 655
                 A  +   M +R  I D++ C
Sbjct: 561 HKDESRALLLVGEMRDRGFIADVRPC 586



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 224/472 (47%), Gaps = 39/472 (8%)

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
           ++M+L G++PN+ T +  +  +C L R+     ++ ++   G  P  V++ T++  LCK 
Sbjct: 117 KQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKV 176

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
                                  G   +A EL + M   GC PDV TY  ++NG C++GE
Sbjct: 177 -----------------------GEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGE 213

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
              A  +L++M   GC+PN V+Y+  ++ LC +    EA ++ +  + +  +P+  TY+ 
Sbjct: 214 TAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTS 273

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ GL +  +  EA  ++ EM      P  V  N+L+ + C+EGK+  A   ++     G
Sbjct: 274 LIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMG 333

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              NVV ++SL+ G+    D+ EA  L   M      P+  +Y  +I+   K  R++EA 
Sbjct: 334 VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAM 393

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENL 592
           +L  +M+ +GL P  V+Y T+IH +CQ+G++ +   L   M +         Y+ +++  
Sbjct: 394 QLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGF 453

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  GYL +A ++   +  T  K +     +LV +    G    A K+   +F + L P +
Sbjct: 454 CKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHV 513

Query: 653 KLCKKVSERLILEGKSEEA--------------DTLMLRFVERGHIQPKSEE 690
           +L   +   L  EG  +EA              D +    + RG +Q K E 
Sbjct: 514 QLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDES 565



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 207/411 (50%), Gaps = 12/411 (2%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           VL  + + G++     F+ L+    + G+   A+ +   M      P++   NT I+ L 
Sbjct: 150 VLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLC 209

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              + A A   L++M+ AG  PN++TY+ LI   C    + +A+ +   M  KG SPD  
Sbjct: 210 KIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIF 269

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQM 330
           +Y +++  LCK  R KE   L+ +M + +            + F  +G++ EA  ++  M
Sbjct: 270 TYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTM 329

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
           ++MG  P+VVTY++++ G+    ++ +A+K+   M   GCKPN  SY   +NG C   + 
Sbjct: 330 TEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRI 389

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA ++ N    +  TPN ++Y+ ++HG  + GKL EA D+ R M   G  P     ++L
Sbjct: 390 DEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSIL 449

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           +   C++G +  A +  +   +     N+V +T L+   C+ G+ ++A  L  ++++   
Sbjct: 450 LDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGL 509

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            P    YTTII+ L K G ++EA E    M + G  P  ++Y  +I    Q
Sbjct: 510 QPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQ 560



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 203/406 (50%), Gaps = 17/406 (4%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C+P+ ++Y  ++    + G+   A  +L  M++A   PN++  +T I  L     + +AL
Sbjct: 194 CQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEAL 253

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
                M+  GI+P++ TY  LI+G C   R K+A  L++EM      PD V++  ++   
Sbjct: 254 DIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTF 313

Query: 292 CKEKRIKEVRDLMEKM---------VNDSNLFHDQG---RIEEAKELVNQMSQMGCIPDV 339
           CKE ++ E   +++ M         V  S+L +       + EA++L + M   GC P++
Sbjct: 314 CKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNI 373

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            +Y  ++NG+C+   +D+A ++  +M H G  PN VSY   ++G C  GK  EA+++   
Sbjct: 374 FSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRN 433

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
                  P+  TYS+++ G  ++G L +A  + R M      P  V   +L+ ++C+ G 
Sbjct: 434 MCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGN 493

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
              A+K   E   +G   +V  +T++I G C++G L+EAL    +M      PD ++Y  
Sbjct: 494 HKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNV 553

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
           II  L ++     A  L+ +M  +G +  V   R  +   CQ  +V
Sbjct: 554 IIRGLLQHKDESRALLLVGEMRDRGFIADV---RPCLSEVCQGKKV 596



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 177/366 (48%), Gaps = 27/366 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  +++ L + +L   A  +   M  +GI   P+ F+Y  L+    +  + + A  +L
Sbjct: 234 VTYSTLIDSLCRDRLVNEALDIFSYMKAKGIS--PDIFTYTSLIQGLCKFSRWKEASALL 291

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M    + P+++  N  +       K+++AL  L+ M   G+ PNV+TY+ L+ GY   
Sbjct: 292 NEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLW 351

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             + +A KL   M  KGC P+  SY  ++   CK K                       R
Sbjct: 352 TDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAK-----------------------R 388

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           I+EA +L N+M   G  P+ V+Y  +++GFC++G+L +A+ + + M  +G  P+  +Y+ 
Sbjct: 389 IDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSI 448

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L+G C  G   +A  +    +  +  PN + Y++++H + + G   +A  +  E+  +G
Sbjct: 449 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQG 508

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P       +I  LC+EG +D A +  +     GC  + +++  +IRG  Q  D   AL
Sbjct: 509 LQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRAL 568

Query: 500 SLLDDM 505
            L+ +M
Sbjct: 569 LLVGEM 574



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 12/313 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  +++ L K    + A  +L  M    I      F+ L+  + + GK+  A+ VL
Sbjct: 267 DIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVL 326

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  V PN++  ++ ++   +   + +A +    M   G  PN+ +YN LI GYC  
Sbjct: 327 KTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKA 386

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------ 313
            RI +A++L +EM  +G +P+ VSY T++   C+  +++E +DL   M  + NL      
Sbjct: 387 KRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTY 446

Query: 314 ------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                 F  QG + +A  L   M      P++V YT +V+  C+ G    A+K+  +++ 
Sbjct: 447 SILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFV 506

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G +P+   YT  +NGLC  G   EA E     E +   P+ I+Y+V++ GL +    S 
Sbjct: 507 QGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESR 566

Query: 428 ACDVVREMVKKGF 440
           A  +V EM  +GF
Sbjct: 567 ALLLVGEMRDRGF 579


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 266/562 (47%), Gaps = 51/562 (9%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR-FLER 236
            +S L+    R G+L+++     ++ K     N ++ N  +  L  G ++ +A+   L+R
Sbjct: 100 TYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQR 159

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP---LKGCSPDKVSYYTVMGYLCK 293
           M   G TP+ ++Y+ L+KG+C+ +R ++A++L+  M     + C P+ V+Y TV+  LCK
Sbjct: 160 MPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCK 219

Query: 294 EKRIKEVRDLMEKMV-------NDSN--LFHDQ---GRIEEAKELVNQMSQMGCIPDVVT 341
            +       + ++M+       ND+   L H     G+ +E  +++ +MS  G  PD  T
Sbjct: 220 AQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYT 279

Query: 342 YTAVVNGFC--------------------------------RVGELDQAKKMLQQMYHHG 369
           Y +++N  C                                + G +D+A  +  +M  HG
Sbjct: 280 YGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 339

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PN V+Y A ++ LC  G+  +A    N    E  TPN + ++ +++GL    K   A 
Sbjct: 340 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAE 399

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           ++V EM+ +G  P  V  N LI +LC  G++   ++ +    + G   +  ++T LI G+
Sbjct: 400 ELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGY 459

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C  G  +EA  + D M      P  VTY T++       R+++A  L  +ML KG+ P V
Sbjct: 460 CLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGV 519

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKML-SKQKCRT-AYNQVIENLCSFGYLEEAGKILGK 607
           VTY T++H   Q  R  +  +L   M+ S  KC    YN ++  LC    ++EA K+   
Sbjct: 520 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQS 579

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +     + +  T  +++ + L  G    A  +   +    L+P++   + V+E LI EG 
Sbjct: 580 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGS 639

Query: 668 SEEADTLMLRFVERGHIQPKSE 689
            EE D+L    +E+    P S+
Sbjct: 640 LEEFDSL-FSAMEKNGTAPNSQ 660



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 245/548 (44%), Gaps = 54/548 (9%)

Query: 135 WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKL 192
           WR  +D ++  ++  +    ++ +    +L+ M   G  C P+  SY  L+  +    + 
Sbjct: 129 WRV-NDIVINQLLKGLCDGKRVGEAMDVLLQRMPELG--CTPDTVSYSILLKGFCNENRA 185

Query: 193 RNAMYVLSMM---QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
             A+ +L MM      +  PN++   T I  L       +A    ++M   G+ PN  TY
Sbjct: 186 EEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTY 245

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM--EKM 307
           NCLI GY  + + K+ ++++++M  +G  PD  +Y +++ YLC    +    DLM    +
Sbjct: 246 NCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGL 305

Query: 308 VNDSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
             D ++F+         G I++A ++ N+M Q G  P+VV Y A+++  C++G +D A+ 
Sbjct: 306 SPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEV 365

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLC----------------------------------- 385
              QM + G  PN V + + + GLC                                   
Sbjct: 366 KFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLC 425

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
           + G+ +E R +I+  E     P+A +Y+ ++ G    G+  EA  V   MV  G  PT V
Sbjct: 426 NVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEV 485

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N L+   C   ++D A    +E L KG    VV + +++ G  Q     EA  L  +M
Sbjct: 486 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM 545

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                  D  TY  I++ L K+  V+EA ++   + SKGL   ++T+  +I    + GR 
Sbjct: 546 INSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 605

Query: 566 EDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           ED + L   + +         Y  V ENL   G LEE   +   + +  +  ++   + L
Sbjct: 606 EDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNAL 665

Query: 624 VESYLNKG 631
           V   L++G
Sbjct: 666 VRRLLHRG 673



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 240/505 (47%), Gaps = 27/505 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++ L K +L   A+ V + M   G++   + ++ L+  Y   GK +  + +L  
Sbjct: 208 VTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEK 267

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + P+   C T   +L     L++   FL+ M   G++P+   +N     Y     
Sbjct: 268 MSARGLKPD---CYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGM 324

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SN 312
           I  A+ + ++M   G SP+ V+Y  ++  LCK  R+ +      +M+N+         ++
Sbjct: 325 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNS 384

Query: 313 LFHDQGRI---EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L +    +   E A+ELV +M   G  P+ V +  ++   C VG + + ++++  M H G
Sbjct: 385 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVG 444

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            +P+  SYT  ++G C  G++ EA ++ +       +P  +TY+ ++HG     ++ +A 
Sbjct: 445 VRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAY 504

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            + REM++KG  P  V  N ++  L +  +   AK+     +N G   ++  +  ++ G 
Sbjct: 505 CLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGL 564

Query: 490 CQKGDLEEALSLLDDMYLCKK--DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           C+   ++EA  +     LC K    + +T+T +I AL K GR E+A +L   + + GLVP
Sbjct: 565 CKSNCVDEAFKMFQS--LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVP 622

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA-----YNQVIENLCSFGYLEEAG 602
            VVTYR V     + G +E+   L   M   +K  TA      N ++  L   G +  AG
Sbjct: 623 NVVTYRLVAENLIEEGSLEEFDSLFSAM---EKNGTAPNSQMLNALVRRLLHRGDISRAG 679

Query: 603 KILGKVLRTASKADASTCHVLVESY 627
             L K+       +AST  +L+  +
Sbjct: 680 AYLSKLDERNFSVEASTTSLLISIF 704



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 170/380 (44%), Gaps = 15/380 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  ++ +     +K  +   A  +   M + G+      +  L+ A  + G++ +A    
Sbjct: 308 DHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKF 367

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M    V PN+++ N+ ++ L   +K  +A   +  M   GI PN + +N LI   C++
Sbjct: 368 NQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNV 427

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND--------- 310
            R+ +  +LID M   G  PD  SY  ++   C   R  E   + + MV+          
Sbjct: 428 GRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTY 487

Query: 311 SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           + L H      RI++A  L  +M + G  P VVTY  +++G  +     +AK++   M +
Sbjct: 488 NTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMIN 547

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G K +  +Y   LNGLC +    EA +M  +   +    N IT+++++  L + G+  +
Sbjct: 548 SGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKED 607

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A D+   +   G  P  V   L+ ++L  EG ++            G A N     +L+R
Sbjct: 608 AMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVR 667

Query: 488 GFCQKGDLEEA---LSLLDD 504
               +GD+  A   LS LD+
Sbjct: 668 RLLHRGDISRAGAYLSKLDE 687



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 158/370 (42%), Gaps = 14/370 (3%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           RQ     + + Y  +++ L K      A+     M   G+      F+ L+       K 
Sbjct: 336 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 395

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A  ++  M    + PN +  NT I  L    ++ +  R ++ M+  G+ P+  +Y  L
Sbjct: 396 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPL 455

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMV 308
           I GYC   R  +A K+ D M   G SP +V+Y T++   C   RI +     R+++ K V
Sbjct: 456 ISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGV 515

Query: 309 NDS---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                        LF  + R  EAKEL   M   G   D+ TY  ++NG C+   +D+A 
Sbjct: 516 TPGVVTYNTILHGLFQTK-RFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAF 574

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           KM Q +   G + N +++T  +  L   G+  +A ++          PN +TY +V   L
Sbjct: 575 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENL 634

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
             EG L E   +   M K G  P    +N L++ L   G +  A  ++ +   +  +V  
Sbjct: 635 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEA 694

Query: 480 VNFTSLIRGF 489
              + LI  F
Sbjct: 695 STTSLLISIF 704


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 216/453 (47%), Gaps = 30/453 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D   Y  +L+ L   K C+ A  ++ +MA  G  C P   SY  V   + + G +  A  
Sbjct: 214 DVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYT 273

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M    + PN++ CN+ I  L     + KA   L++M    I PN  TYN LI GY 
Sbjct: 274 LFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYL 333

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              +  +A++++ EM   G  P+ V+Y  ++  LCK     E R++   M+         
Sbjct: 334 SSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNAS 393

Query: 312 ---NLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
              +L H    +G + +   + + M Q G  P    +   +  +C+ G LD+A     +M
Sbjct: 394 TYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKM 453

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  P+ V+YT  ++GLC  G+  +A        ++  +P+ IT++ ++HG    GK 
Sbjct: 454 QQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKW 513

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A ++  EM+ +G  P     N +I  L +EGK+  A+K        G   NVV++ ++
Sbjct: 514 EKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTM 573

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G+   G++ E + LLDDM L    P  VT+ T++D                 M+S GL
Sbjct: 574 IHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGL 617

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            P VVT +T+I   C+ GR+ED+L L  +ML K
Sbjct: 618 KPDVVTCKTLIDSCCEDGRIEDILTLFREMLGK 650



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 252/528 (47%), Gaps = 36/528 (6%)

Query: 167 MARRGIE-CRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           MAR G +   P+   F  L+     AG L      L  + K  +    +     +  L  
Sbjct: 132 MARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCA 191

Query: 224 GNKLAKALRF-LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG--CSPD 280
             + + A+   L RM   G TP+V +Y  L+KG C   + ++A +LI  M   G  C P+
Sbjct: 192 EKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPN 251

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFHDQGRIE---------EAKELVN 328
            VSY TV+    KE  + +   L  KM++     N+      I+         +A+ ++ 
Sbjct: 252 VVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 311

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           QM     +P+  TY ++++G+   G+  +A ++L++M   G +PN V+Y+  ++ LC +G
Sbjct: 312 QMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSG 371

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              EARE+ N+  +    PNA TY  ++HG   EG L +  +V   MV+ G  P     N
Sbjct: 372 LHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFN 431

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           + I + C+ G++D A     +   +G   ++V +T++I G C+ G L++A+S    M   
Sbjct: 432 IEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDD 491

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD +T+ T+I   + +G+ E+A EL  +M+ +G+ P V T+ ++I +  + G+V + 
Sbjct: 492 GLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEA 551

Query: 569 LKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            KL + M     +    +YN +I      G + E  K+L  +L    K  A T + L++ 
Sbjct: 552 RKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG 611

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            ++ G                L PD+  CK + +    +G+ E+  TL
Sbjct: 612 MVSMG----------------LKPDVVTCKTLIDSCCEDGRIEDILTL 643



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 175/377 (46%), Gaps = 6/377 (1%)

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM-LQQMYHHGCKPNT 374
           D G +      + Q+ + G     VT+T ++   C       A  + L++M   GC P+ 
Sbjct: 156 DAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDV 215

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEW--WTPNAITYSVVMHGLRREGKLSEACDVV 432
            SYT  L GLC   K  EA E+I+   E+     PN ++Y+ V+HG  +EG + +A  + 
Sbjct: 216 FSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLF 275

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            +M+  G  P  V  N +I  LC+   MD A+  +Q+ +++    N   + SLI G+   
Sbjct: 276 CKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSS 335

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G   EA+ +L +M    + P+ VTY+ +ID L K+G   EA E+   M+  G  P   TY
Sbjct: 336 GQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTY 395

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
            +++H Y   G + D+  + + M+    +  R  +N  I   C  G L+EA     K+ +
Sbjct: 396 GSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQ 455

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                D      +++     G    A    C+M +  L PD+     +     L GK E+
Sbjct: 456 QGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEK 515

Query: 671 ADTLMLRFVERGHIQPK 687
           A+ L    ++RG I P 
Sbjct: 516 AEELFYEMMDRG-IPPN 531



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 156/357 (43%), Gaps = 39/357 (10%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+L+ M+R G       +S L+    ++G    A  + + M ++   PN     + +H
Sbjct: 341 AVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLH 400

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  L       + M   G+ P    +N  I  YC   R+ +A    ++M  +G  P
Sbjct: 401 GYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMP 460

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D V+Y TV+  LCK                        GR+++A     QM   G  PD+
Sbjct: 461 DIVAYTTVIDGLCK-----------------------IGRLDDAMSRFCQMIDDGLSPDI 497

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           +T+  +++GF   G+ ++A+++  +M   G  PN  ++ + ++ L   GK  EAR++ + 
Sbjct: 498 ITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDL 557

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
                  PN ++Y+ ++HG    G++ E   ++ +M+  G  PT V  N L+  +     
Sbjct: 558 MPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM----- 612

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
                      ++ G   +VV   +LI   C+ G +E+ L+L  +M       DT+T
Sbjct: 613 -----------VSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTIT 658



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/402 (22%), Positives = 167/402 (41%), Gaps = 60/402 (14%)

Query: 113 AVLRSQADERV--------ALQFFYWADRQWR-------------YRHDPIVYYMMLEIL 151
           AVL+   DE +        +L   Y +  QW               R + + Y M+++ L
Sbjct: 308 AVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCL 367

Query: 152 SKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNL 211
            K+ L   A+ +   M + G +     +  L+  Y+  G L +   V  +M +  + P  
Sbjct: 368 CKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGR 427

Query: 212 LICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
            + N  I+      +L +A     +MQ  G  P+++ Y  +I G C + R+ DA+    +
Sbjct: 428 HVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQ 487

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMS 331
           M   G SPD +++ T++                       + F   G+ E+A+EL  +M 
Sbjct: 488 MIDDGLSPDIITFNTLI-----------------------HGFALHGKWEKAEELFYEMM 524

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
             G  P+V T+ ++++   + G++ +A+K+   M   G KPN VSY   ++G    G+  
Sbjct: 525 DRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVG 584

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           E  ++++        P A+T++ ++ G                MV  G  P  V    LI
Sbjct: 585 EVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVVTCKTLI 628

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            S C +G+++      +E L K    + +     +RG   K 
Sbjct: 629 DSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGVTVKA 670



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 6/255 (2%)

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P      +LI   C  G ++     + + +  G     V FT L+R  C +    +A+++
Sbjct: 142 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNI 201

Query: 502 -LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG--LVPTVVTYRTVIHR 558
            L  M      PD  +YTT++  L    + EEA EL+  M   G    P VV+Y TVIH 
Sbjct: 202 VLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHG 261

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           + + G V     L  KML           N VI+ LC    +++A  +L +++      +
Sbjct: 262 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 321

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
            +T + L+  YL+ G    A ++   M      P++     + + L   G   EA  +  
Sbjct: 322 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFN 381

Query: 677 RFVERGHIQPKSEEH 691
             ++ G  +P +  +
Sbjct: 382 SMIQSGQ-KPNASTY 395


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/524 (25%), Positives = 256/524 (48%), Gaps = 19/524 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A     LM R        +F++L+   ++         + + M+ + ++ +    N  ++
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L   N+L +       +   G +PN++TYN LIKG C  HRI +A +L   M   GC+P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D V+Y T++  LC    I     L ++M+ND + +                 ++ C P+V
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRY-----------------EINCKPNV 215

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           +TY  +V+G C+VG  D+AK++ ++M   G  P+ +SY + ++G C  GK  E++ +++ 
Sbjct: 216 ITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDE 275

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             ++   P+ +T++V++  L +EGK+ EA  ++  M++ G  P  V  N LI+  C  G 
Sbjct: 276 MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGD 335

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           ++ A++      +KGC  +V+++  LI G+ +   +EEA+ L ++M L  K P+ +TY +
Sbjct: 336 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDS 395

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           ++  +   G+V++A +L   M + G+     TY   +   C+   + + +KL  ++ S  
Sbjct: 396 LLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSN 455

Query: 580 -KCRTA-YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
            K      N +I+ LC  G LE A ++  K+     + +  T  +++  +  +G    A 
Sbjct: 456 FKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKAN 515

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
            +  +M      PD+     +        K EE   L+ R  ++
Sbjct: 516 VLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQK 559



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 243/497 (48%), Gaps = 31/497 (6%)

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
           +A++   +M ++   P+L   N  +  L      ++      +M+L+G++ +  T N L+
Sbjct: 52  HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
              C+++R+++       +  +G SP+ V+Y T++  LC E R                 
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHR----------------- 154

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM------YH 367
                 I EA  L  +M ++GC PDVVTY  ++ G C  G ++ A K+ Q+M      Y 
Sbjct: 155 ------ISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYE 208

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
             CKPN ++Y   ++GLC  G+  EA+++    + +   P+ I+Y+ ++HG    GK  E
Sbjct: 209 INCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEE 268

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           +  ++ EM+ +G  P  V  N+LI +LC+EGK+  AKK +   +  G   ++V + SLI 
Sbjct: 269 SKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIE 328

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC  GDL  A  L   M     +PD ++Y  +I+  SK  +VEEA +L  +ML  G  P
Sbjct: 329 GFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRP 388

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVI--ENLCSFGYLEEAGKIL 605
            V+TY +++      G+V+D  KL   M +      +Y   I  + LC    L EA K+ 
Sbjct: 389 NVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLF 448

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            ++  +  K +    + L++     G    A+++  ++ N    P++     +      E
Sbjct: 449 TELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCRE 508

Query: 666 GKSEEADTLMLRFVERG 682
           G+ ++A+ L+ +    G
Sbjct: 509 GQVDKANVLIQKMEANG 525



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 252/525 (48%), Gaps = 27/525 (5%)

Query: 124 ALQFFYWADRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           AL FF+      R    P +  +  +L  L+K K       +   M   G+       + 
Sbjct: 53  ALHFFHL---MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNI 109

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+       +LR      + + +   +PN++  NT I  L + +++++A R   RMQ  G
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK------GCSPDKVSYYTVMGYLCKEK 295
            TP+V+TY  LIKG C    I  A+KL  EM          C P+ ++Y  ++  LCK  
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 296 RIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYT 343
           R  E + L E+M         ++ ++L H     G+ EE+K L+++M   G  PD+VT+ 
Sbjct: 230 REDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFN 289

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            +++  C+ G++ +AKK+L  M   G  P+ V+Y + + G C  G    ARE+  +   +
Sbjct: 290 VLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 349

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+ I+Y+V+++G  +  K+ EA  +  EM+  G  P  +  + L++ +   GK+D A
Sbjct: 350 GCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDA 409

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           KK        G A N   +   + G C+   L EA+ L  ++       +      +ID 
Sbjct: 410 KKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDG 469

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR- 582
           L K G++E A EL  K+ ++G  P VVTY  +IH +C+ G+V+    L++KM     C  
Sbjct: 470 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM-EANGCTP 528

Query: 583 --TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
               YN ++        LEE  ++L ++ +     DA TC ++V+
Sbjct: 529 DIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVD 573



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 229/460 (49%), Gaps = 24/460 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y  + + Y  +++ L        A R+   M + G  C P+  +Y  L+      G +  
Sbjct: 135 YSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG--CTPDVVTYGTLIKGLCGTGNINI 192

Query: 195 AMYVLSMM------QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           A+ +   M       +    PN++  N  +  L    +  +A +  E M+  G+ P++++
Sbjct: 193 ALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIIS 252

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           YN LI G+C   + +++ +L+DEM  +G  PD V++  ++  LCKE ++ E + L+  M+
Sbjct: 253 YNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI 312

Query: 309 NDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
            +S +  D              G +  A+EL   M   GC PDV++Y  ++NG+ +  ++
Sbjct: 313 -ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKV 371

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           ++A K+  +M   G +PN ++Y + L G+   GK  +A+++ +  +      N+ TY + 
Sbjct: 372 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 431

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + GL +   L EA  +  E+    F      +N LI  LC+ GK++ A +  ++  N+G 
Sbjct: 432 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 491

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             NVV +T +I GFC++G +++A  L+  M      PD +TY T++    ++ ++EE  +
Sbjct: 492 EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQ 551

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           L+ +M  K + P  +T   V+    +  + ++ L LL + 
Sbjct: 552 LLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRF 591



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 142/326 (43%), Gaps = 10/326 (3%)

Query: 367 HHGCKPNTVSYTAFLNGLCHNGK--SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           H    P+     AF    C  G   +  A    +       TP+  +++ ++ GL +   
Sbjct: 25  HSSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKH 84

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
            S+   +  +M   G       +N+L+  LC   ++          L +G + N+V + +
Sbjct: 85  YSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNT 144

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK- 543
           LI+G C +  + EA  L   M      PD VTY T+I  L   G +  A +L  +ML+  
Sbjct: 145 LIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDI 204

Query: 544 -----GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFG 596
                   P V+TY  ++   C+VGR ++  +L E+M ++    +  +YN +I   C  G
Sbjct: 205 SRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAG 264

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
             EE+ ++L ++L    + D  T +VL+++   +G  + A K+   M    ++PDL    
Sbjct: 265 KWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYN 324

Query: 657 KVSERLILEGKSEEADTLMLRFVERG 682
            + E   + G    A  L +    +G
Sbjct: 325 SLIEGFCMVGDLNSARELFVSMPSKG 350



 Score = 40.0 bits (92), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 22/129 (17%), Positives = 60/129 (46%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +++ L K    + A  +   ++  G E     ++ ++  + R G++  A  ++  M+   
Sbjct: 466 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 525

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
             P+++  NT +      NKL + ++ L RM    ++P+ +T + ++       + ++ +
Sbjct: 526 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECL 585

Query: 267 KLIDEMPLK 275
            L+   P++
Sbjct: 586 HLLPRFPIQ 594


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 159/642 (24%), Positives = 292/642 (45%), Gaps = 79/642 (12%)

Query: 105 SLKPRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
           +L P  +  +L   + D ++AL+FF WA  Q  +RH    Y +++ ++ + ++   A   
Sbjct: 67  ALAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDT 126

Query: 164 LR--------------------LMARRGI-------------------------EC---- 174
           ++                    L + R I                         EC    
Sbjct: 127 VKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRM 186

Query: 175 -----RPEAFS--YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
                 P+A S  +L+   S++G  +      + M  A +AP++   N  I  L     L
Sbjct: 187 RNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDL 246

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
             + R   +M+  G++P+V+TYN LI GY  +  +++   L +EM   GC PD ++Y  +
Sbjct: 247 ENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGL 306

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGC 335
           +   CK +++    +   +M N+             + F  +G ++ A +L+  M + G 
Sbjct: 307 INCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGL 366

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           +P+  TYT++++  C+ G L +A K+L  M   G K N V+YTA L+GLC  G+ +EA E
Sbjct: 367 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEE 426

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +  +  ++  +PN   Y+ ++HG  +  ++ +A  ++++M +    P  +    +I   C
Sbjct: 427 VFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHC 486

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
            + K++  K  ++E  ++G + N V  T++I  + + G   +AL+   +M     +   V
Sbjct: 487 SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIV 546

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY  +ID L + G VE A +   +MLS GL P V  Y ++I   C    +E   KL ++M
Sbjct: 547 TYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEM 606

Query: 576 LSKQKCR------TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
               +CR      TA+  +I+     G L+EA  ++ ++   A + D      LV  +  
Sbjct: 607 ----QCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQ 662

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
            G    A K    M  + ++P+  LC  +       G+ +EA
Sbjct: 663 CGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEA 704



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 212/448 (47%), Gaps = 19/448 (4%)

Query: 170 RGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           + + C P+  +Y  L+  Y +  K+  A    S M+   + PN++  +T I        +
Sbjct: 292 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 351

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
             A++ L  M+  G+ PN  TY  LI   C    + +A KL+++M   G   + V+Y  +
Sbjct: 352 QGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 411

Query: 288 MGYLCKEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMGC 335
           +  LCK  R+ E  ++   M+ D         + L H      R+E+A +++ QM++   
Sbjct: 412 LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 471

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PD++ Y +++ G C   +L++ K +L++M   G   N V  T  ++     GKS +A  
Sbjct: 472 KPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALN 531

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
                ++       +TY V++ GL   G +  A D    M+  G  P       LI  LC
Sbjct: 532 FFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC 591

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
               ++ AKK   E   +G   ++  FT+LI G  + G+L+EAL L+  M     + D  
Sbjct: 592 XNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 651

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL---L 572
            YT+++   S+ G + +A +   +M+ KG++P  V    ++  Y + G++++ ++L   +
Sbjct: 652 VYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711

Query: 573 EKMLSKQK--CRTAYNQVIENLCSFGYL 598
           E+M    +   + AYN+   NL    YL
Sbjct: 712 ERMAYSFEFDAQLAYNEQGVNLTLHAYL 739



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 186/387 (48%), Gaps = 26/387 (6%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           + + + Y  +++   K  + QGA ++L  M R G+   P  F+Y  L+ A  +AG L  A
Sbjct: 332 KPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGL--LPNEFTYTSLIDANCKAGNLTEA 389

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +L+ M +A V  N++     +  L    ++ +A      M   GI+PN   Y  L+ G
Sbjct: 390 WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 449

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---- 311
           Y    R++DA+K++ +M      PD + Y +++   C +++++E + ++E+M +      
Sbjct: 450 YIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN 509

Query: 312 --------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   + +   G+  +A     +M  +G    +VTY  +++G C  G ++ A     
Sbjct: 510 PVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFC 569

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   G +PN   YT+ ++GLC N     A+++ +  +    TP+   ++ ++ G  + G
Sbjct: 570 RMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHG 629

Query: 424 KLSEACDVVREMVKKGFFPTPVEINL-----LIQSLCREGKMDGAKKFMQECLNKGCAVN 478
            L EA  ++  M +       +E +L     L+    + G++  A+KF  E + KG    
Sbjct: 630 NLQEALVLISRMTE-----LAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE 684

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDM 505
            V    L+R + ++G L+EA+ L ++M
Sbjct: 685 EVLCICLLREYYKRGQLDEAIELKNEM 711



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 151/350 (43%), Gaps = 2/350 (0%)

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C+     +  + + F  +G L++A +   +M +    P   S    L+ L  +G     R
Sbjct: 156 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 215

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +  N        P+  TY+V++  L +EG L  +  +  +M + G  P  V  N LI   
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            + G ++       E  + GC  +++ +  LI  +C+   +  A     +M      P+ 
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VTY+T+IDA  K G ++ A +L+  M   GL+P   TY ++I   C+ G + +  KLL  
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395

Query: 575 MLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           ML    +     Y  +++ LC  G + EA ++   +L+     +      LV  Y+    
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              A K+  +M   N+ PDL L   +      + K EE   ++     RG
Sbjct: 456 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 505



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 73/339 (21%), Positives = 135/339 (39%), Gaps = 59/339 (17%)

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKK-----GF------------------------- 440
           +Y +++H + R    ++A D V+E++       GF                         
Sbjct: 106 SYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDV 165

Query: 441 -FPTPVEI-------------------------NLLIQSLCREGKMDGAKKFMQECLNKG 474
            F   VE+                         N L+  L + G     +KF  + +  G
Sbjct: 166 LFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAG 225

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
            A +V  +  +I   C++GDLE +  L   M      PD VTY ++ID   K G +EE  
Sbjct: 226 IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVA 285

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
            L  +M   G VP ++TY  +I+ YC+  ++    +   +M +   +     Y+ +I+  
Sbjct: 286 SLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAF 345

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G ++ A K+L  + RT    +  T   L+++    G    A+K+   M    +  ++
Sbjct: 346 CKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNI 405

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
                + + L   G+  EA+ +    ++ G I P  + +
Sbjct: 406 VTYTALLDGLCKAGRMIEAEEVFRSMLKDG-ISPNQQVY 443


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 158/637 (24%), Positives = 277/637 (43%), Gaps = 99/637 (15%)

Query: 89  SAWSPKLEGELRNLLRSLKPR----QICAVLRSQADERVALQFFYWADRQWRYRHDPIVY 144
           S+WS      +RN+L  +  +     + AVLRS      A+ FF WA  Q  ++HD   Y
Sbjct: 66  SSWSVH---NIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTY 122

Query: 145 YMMLEIL-----------------------------------SKTKLCQGAKRVLRLMAR 169
             ++ +L                                   ++T+    A     +M R
Sbjct: 123 NCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKR 182

Query: 170 RGIECRPEAFSYLMVA--YSRAGKLRNAMYVL-SMMQKAAVAPNLLICNTAIHVLVVGNK 226
           +   C+P+  ++L++     +AG    A  V   MM    V P+  +    +  L+   +
Sbjct: 183 K--RCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +A     +M+  G  P+ + YN +I G       ++A+K++D M  K C P +V+Y  
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGI 300

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMG 334
           ++  LCK   ++   +L   M            ++L H     GR++EA  L ++M + G
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             PDV+T+T +++G C+ G  +QA K  ++M   GCKPN V+YT  + GL   G+   A 
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT----------- 443
            ++         P+++TY  ++ G  + G+L EA  ++ E+ K    P            
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGL 480

Query: 444 ----PVEINL---------------------LIQSLCREGKMDGAKKFMQECLNKGCAVN 478
                VE  L                     +I  LC+ G++D A +  Q  +++GC  +
Sbjct: 481 CDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPD 540

Query: 479 VVNFTSLIRGFCQKGD--LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
              +  LI G C+  +  +E A +LL D+ +    PD VTYT +   L K G V+ A ++
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKM 600

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCS 594
           + +  S+G    VV Y  +    C  G+V+  + L ++M+ +       AY  +I  L  
Sbjct: 601 LEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIK 660

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
              LE+A K   +++    K   +T   LV++  + G
Sbjct: 661 GKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/545 (25%), Positives = 242/545 (44%), Gaps = 53/545 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  ++  M+  L K K  + A+ V   M + G      A++ ++   ++AG  + A+ VL
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M   A  P  +     ++ L     L +A      M  +G  PN + Y  LI G+   
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R+K+A  L DEM   G  PD +++  ++  LCK    ++     E+M+           
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     GR+  A  ++  M   GC PD VTY  +++GFC++G LD+A ++L ++  
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDK 463

Query: 368 HGCKPNTVSYTAFLNGLCHNG-----------KSLEAREMINTS---------------- 400
               PN   Y++ + GLC  G           +S  A E ++                  
Sbjct: 464 CSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLD 523

Query: 401 ---------EEEWWTPNAITYSVVMHGL--RREGKLSEACDVVREMVKKGFFPTPVEINL 449
                      E   P+A TY+++++GL   RE ++  A  ++ ++   G+ P  V    
Sbjct: 524 EACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTP 583

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L   LC+ G++D A K ++E  ++G   +VV +T+L  G C +G ++ A+SL  +M    
Sbjct: 584 LCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQG 643

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             PD   Y  II+ L K  ++E+A +   +M+ KG  PTV TY  ++   C  G V++  
Sbjct: 644 GAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAF 703

Query: 570 KLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
              E ML++ +   +   Y+ +I   C    ++ A K+   ++   +   A T   L + 
Sbjct: 704 HRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDG 763

Query: 627 YLNKG 631
            +  G
Sbjct: 764 LVRSG 768



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 230/491 (46%), Gaps = 55/491 (11%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           +R + ++Y  ++   +K+   + A  +   M   G   RP+  ++ ++     ++G    
Sbjct: 326 FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY--RPDVITHTVMIDGLCKSGNFEQ 383

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A      M +    PN++   T I  L    ++A A R ++ M   G  P+ +TY CL+ 
Sbjct: 384 AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLD 443

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT---------------------------- 286
           G+C L R+ +A +L+DE+     SP+   Y +                            
Sbjct: 444 GFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAEN 503

Query: 287 --------VMGYLCKEKRIKEVRDLMEKMVN-----DSNLFH---------DQGRIEEAK 324
                   ++  LCK  R+ E   + ++MV+     D+  ++          + R+E A 
Sbjct: 504 LDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAF 563

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L++ +  +G +PD VTYT +  G C++GE+D+A KML++    G   + V+YTA   GL
Sbjct: 564 ALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGL 623

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C+ G+   A  +      +   P+A  Y  +++GL +  KL +AC    EM+ KG  PT 
Sbjct: 624 CYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTV 683

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAV-NVVNFTSLIRGFCQKGDLEEALSLLD 503
                L+Q+LC  G +D A    +  L +G  V +V+ + +LI GFC+   ++ AL L +
Sbjct: 684 ATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFE 743

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           DM      P  VT  ++ D L ++G+ E+A EL+ +M + G  P   T+  ++    +  
Sbjct: 744 DMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSD 803

Query: 564 RVEDLLKLLEK 574
               LLKL+++
Sbjct: 804 ESGKLLKLVQE 814


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 263/554 (47%), Gaps = 55/554 (9%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV---VGNKLAKALRFLE 235
           F   + AY  AGK   A+ V   M +  + PNLL CNT +  LV       +A A    +
Sbjct: 134 FDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFD 193

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKE 294
            M   G++ +V T+N L+ GYC   +++DA+ +++ M  +   +PD V+Y T++  + K+
Sbjct: 194 DMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKK 253

Query: 295 KRIKEVRDLMEKM---------VNDSNLFHDQ---GRIEEAKELVNQMSQMGCIPDVVTY 342
            R+ +V+DL+  M         V  +NL +     G ++EA ++V  M Q   +PD+ TY
Sbjct: 254 GRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTY 313

Query: 343 TAVVNGFCRVGELD-----------------------------------QAKKMLQQMYH 367
             ++NG C  G +                                    +AKK+++QM +
Sbjct: 314 NILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMEN 373

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLE-AREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
            G KPN V++   L  LC   K  E  R++    E   ++P+ +TY  ++    + G LS
Sbjct: 374 DGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLS 433

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
            A +++REM +KG     + +N ++ +LC+E K+D A   +     +G  V+ V + +LI
Sbjct: 434 GALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLI 493

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G+ ++  +E+A  + D+M   K  P   T+ ++I  L  +G+ E A E   ++   GL+
Sbjct: 494 MGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLL 553

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKI 604
           P   T+ ++I  YC+ GRVE   +   + +        Y  N ++  LC  G  E+A   
Sbjct: 554 PDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNF 613

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
              ++ T  + D  T + ++ ++        AY +   M  + L PD      +   L+ 
Sbjct: 614 FNTLI-TEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLME 672

Query: 665 EGKSEEADTLMLRF 678
           +GK  EAD L+ +F
Sbjct: 673 DGKLSEADELLKKF 686



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 236/476 (49%), Gaps = 25/476 (5%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           ++    D + Y  +L+ +SK       K +L  M R G+      ++ L+  Y + G L+
Sbjct: 233 EFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLK 292

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  ++ +M++  + P+L   N  I+ +     + + L  ++ M+   + P+V+TYN LI
Sbjct: 293 EAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLI 352

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            G  +L    +A KL+++M   G  P++V++   + +LCKE++ +EV             
Sbjct: 353 DGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEV------------- 399

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                   + KELV      G  PD+VTY  ++  + +VG+L  A +M+++M   G K N
Sbjct: 400 ------TRKVKELV---EMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
           T++    L+ LC   K  EA  +++++ +  +  + +TY  ++ G  RE K+ +A ++  
Sbjct: 451 TITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWD 510

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM +    PT    N LI  LC  GK + A +   E    G   +   F S+I G+C++G
Sbjct: 511 EMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEG 570

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            +E+A    ++       PD  T   +++ L K G  E+A      ++++  V T VTY 
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDT-VTYN 629

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
           T+I  +C+  ++++   LL +M  K  +  R  YN +I +L   G L EA ++L K
Sbjct: 630 TMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKK 685



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 141/287 (49%), Gaps = 8/287 (2%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR---EGKMDGA 463
           P+   + + +      GK   A  V ++M++    P  +  N L+  L R      +  A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL-CKKDPDTVTYTTIID 522
           ++   + +  G +++V  F  L+ G+C +G LE+AL +L+ M      +PD VTY TI+ 
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
           A+SK GR+ +  +L++ M   GLVP  VTY  +++ YC++G +++  +++E M       
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 583 T--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               YN +I  +C+ G + E  +++  +     + D  T + L++     G+ L A K+ 
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368

Query: 641 CRMFNRNLIPDLKLCKKVSER-LILEGKSEEADTLMLRFVERGHIQP 686
            +M N  + P+ ++   +S + L  E K EE    +   VE     P
Sbjct: 369 EQMENDGVKPN-QVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSP 414



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 168/355 (47%), Gaps = 7/355 (1%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL---EA 393
           P    +   ++ +   G+   A ++ Q+M     KPN ++    L GL     S     A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK-GFFPTPVEINLLIQ 452
           RE+ +   +   + +  T++V+++G   EGKL +A  ++  MV +    P  V  N +++
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           ++ ++G++   K  + +    G   N V + +L+ G+C+ G L+EA  +++ M      P
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D  TY  +I+ +   G + E  ELM  M S  L P VVTY T+I    ++G   +  KL+
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368

Query: 573 EKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS-KADASTCHVLVESYLN 629
           E+M +   +  +  +N  ++ LC     EE  + + +++       D  T H L+++YL 
Sbjct: 369 EQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLK 428

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
            G    A ++   M  + +  +      + + L  E K +EA  L+    +RG+I
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYI 483



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 10/243 (4%)

Query: 120 DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRL-----MARRGIEC 174
           +E+V   F  W D   R +  P V      I     LC   K  L +     +A  G+  
Sbjct: 499 EEKVEKAFEMW-DEMKRIKITPTVTTFNSLI---GGLCHHGKTELAMEKFDELAESGLLP 554

Query: 175 RPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
               F+ +++ Y + G++  A    +   K +  P+   CN  ++ L       KAL F 
Sbjct: 555 DDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF 614

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
             + +     + +TYN +I  +C   ++K+A  L+ EM  K   PD+ +Y +++  L ++
Sbjct: 615 NTL-ITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMED 673

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
            ++ E  +L++K             +E  K      S+     + + Y+ V+N  C  G 
Sbjct: 674 GKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSDVINELCSRGR 733

Query: 355 LDQ 357
           L +
Sbjct: 734 LKE 736


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 287/595 (48%), Gaps = 19/595 (3%)

Query: 104 RSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
           +SL P+++  +L+S+ +   AL  F    R   Y H P V++ +L+ L   KL     R+
Sbjct: 6   KSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRI 65

Query: 164 LRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA-AVAPNLLICNTAIHVLV 222
           + L+  +  +C  +    ++ AY++      A+ +   M +     P +   N+ ++ L+
Sbjct: 66  VELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALI 125

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
             NK  +A  F    +  G++PN+ TYN LIK  C   +   A +L++ M  +G SPD  
Sbjct: 126 ESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVF 185

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKM--------VNDSNL----FHDQGRIEEAKELVNQM 330
           SY T++  L K   + +   L ++M        V   N+    F  +G I  A E+  ++
Sbjct: 186 SYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL 245

Query: 331 SQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
            +   + P++ +Y  ++NG C+ G+ D++ ++  +M  +    +  +Y+  ++GLC +G 
Sbjct: 246 LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 305

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
              A  +     E   +P+ + Y+ +++G  R G++ E  ++ + M K+G   T V  N+
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNI 364

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI+ L    K+D A    +    K C  + + +  L+ G C+ G L +ALS+L++    +
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 424

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
            D DT  Y+++I+ L + GR++E   ++ +M   G  P       VI+ + +  ++ED L
Sbjct: 425 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484

Query: 570 KLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           +    M+SK    T   YN +I  L       EA  ++ ++L    K +  T  +L+   
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG- 543

Query: 628 LNKGIPL-LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
           L +G  L +A  + C+   +   PD+K+   +   L   GK E+A  L     +R
Sbjct: 544 LCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 598



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 167/374 (44%), Gaps = 4/374 (1%)

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           N   +  + +EA+        MG  P++ TY  ++   CR  + D+AK++L  M+  G  
Sbjct: 122 NALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS 181

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+  SY   +N L  NG   +A ++ +   E   TP+   Y++++ G  ++G +  A ++
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241

Query: 432 VREMVK-KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
              ++K    +P     N++I  LC+ GK D + +            ++  +++LI G C
Sbjct: 242 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
             G+L+ A  +  +M      PD V Y T+++   + GR+EE  EL  K++ K    TVV
Sbjct: 302 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLEL-WKVMEKEGCRTVV 360

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKV 608
           +Y  +I    +  +V++ + + E +  K  C  +  Y  ++  LC  GYL +A  IL + 
Sbjct: 361 SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA 420

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
                  D      ++     +G       V  +M      P+  +C  V    +   K 
Sbjct: 421 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKL 480

Query: 669 EEADTLMLRFVERG 682
           E+A       V +G
Sbjct: 481 EDALRFFGNMVSKG 494



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 23/226 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  M+  L +         VL  M + G +  P   + ++  + RA KL +A+   
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M      P ++  NT I+ L    + ++A   ++ M   G  PN++TY+ L+ G C  
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            ++  A+ L  +   KG  PD   +  ++  LC                         G+
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC-----------------------SSGK 584

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
           +E+A +L ++M Q  C+P++VT+  ++ GF +V + ++A K+   +
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 236/504 (46%), Gaps = 27/504 (5%)

Query: 137 YRHDP-----IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRA 189
           Y H P       Y  ++  L +    + A+R L LM R G   RP+AF++  L++ Y R 
Sbjct: 120 YHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSG--WRPDAFTFNSLILGYCRT 177

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
            +L  A  +   M     + + +     I       ++ +AL     ++     P++ T+
Sbjct: 178 QQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTH 233

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             L+KG CD  R ++ + ++ +M   G  P   +Y  ++   C+E++ +E   ++ +M +
Sbjct: 234 AALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFD 293

Query: 310 DS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
           +             N +  +GR+  A  +   M   GC P+V TY A+V GFC VG++ +
Sbjct: 294 NGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYK 353

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  +L QM   G +P+ V+Y   + G C +G    A  ++   E      +  TY+V++ 
Sbjct: 354 AMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLID 413

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
            L + GK+ EAC +   +  +G  P  V  N +I  LC+ GK D A  F+++ ++ GCA 
Sbjct: 414 ALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAP 473

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +   ++  I   C+     E LS +D+M      P TV YT +ID L K      AT + 
Sbjct: 474 DTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIW 533

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSF 595
            +M+S G  P VVTY T +  YC  GR+ +   ++ +M          AYN +I+   S 
Sbjct: 534 GQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSI 593

Query: 596 GYLEEAGKILGKVLRTASKADAST 619
           G  + A  IL  +   AS  +  T
Sbjct: 594 GKTDHAVTILKHMTGVASMPNHFT 617



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/503 (22%), Positives = 204/503 (40%), Gaps = 100/503 (19%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           +L+ M   G      A++ L+  + R  K   A  +L+ M    + P  + C   ++   
Sbjct: 252 MLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYC 311

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              +++ A+R  E M+L G  PNV TYN +++G+C++ ++  A+ L+D+M   G  PD V
Sbjct: 312 REGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVV 371

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ-------------GRIEEAKELVNQ 329
           +Y  ++   C +  I+    L+ +++  + L  DQ             G+++EA  L + 
Sbjct: 372 TYNLLIRGQCIDGHIESAFRLL-RLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           +   G  P+ VT+  V+NG C+ G+ D A   L++M   GC P+T +Y+ F+  LC    
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKG 490

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVM--------HGLR--------------------- 420
           S E    I+   ++   P+ + Y++V+        +GL                      
Sbjct: 491 SREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTT 550

Query: 421 ------REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
                  EG+L EA +VV EM K G     +  N LI      GK D A   ++      
Sbjct: 551 SVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVA 610

Query: 475 CAVNVVNF---------------------------------------------------T 483
              N   F                                                    
Sbjct: 611 SMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYL 670

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           +++ GF ++  L+E  SL+  M       +   YT++++   K     +A  L+  M+  
Sbjct: 671 AILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGH 730

Query: 544 GLVPTVVTYRTVIHRYCQVGRVE 566
           G +P +++Y+ ++  +   G+ +
Sbjct: 731 GFLPNLISYQYLLSGFTAEGQAD 753



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 157/351 (44%), Gaps = 8/351 (2%)

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCK-PNTVSYTAFLNGLCHNGKSLEAREMINT 399
           T+ +++  F R        ++   MYHHG   P   +Y A +  LC       A+  ++ 
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
                W P+A T++ ++ G  R  +L  A D+  +M  +GF    V    LI+  C  G+
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +D A +  +E        ++    +L++G C     EE L +L  M      P T  Y  
Sbjct: 215 VDEALELFRELEQP----DMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK- 578
           ++D   +  + EEA +++ +M   GLVP  VT   V++ YC+ GR+   +++ E M  K 
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330

Query: 579 -QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
            +     YN +++  C+ G + +A  +L ++     + D  T ++L+      G    A+
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           ++   M    L  D      + + L   GK +EA +L      RG I+P S
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG-IRPNS 440



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/427 (23%), Positives = 179/427 (41%), Gaps = 36/427 (8%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           + A R+LRLM   G+      ++ L+ A  + GK+  A  +   ++   + PN +  NT 
Sbjct: 387 ESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTV 446

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I+ L  G K   A  FLE+M  AG  P+  TY+  I+  C     ++ +  IDEM  K  
Sbjct: 447 INGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDV 506

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN------------DSNLFHDQGRIEEAKE 325
            P  V+Y  V+  L KE+       +  +MV+                + ++GR+ EA+ 
Sbjct: 507 KPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAEN 566

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           +V +M + G I D + Y  +++G   +G+ D A  +L+ M      PN   +  F   L 
Sbjct: 567 VVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPN---HFTFFILLR 623

Query: 386 HNGKSLEAREMINTSEEEWWT-------------------PNAITYSVVMHGLRREGKLS 426
           H  +   A ++   +   W T                    +A  Y  ++ G   E +L 
Sbjct: 624 HLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLD 683

Query: 427 EACDVVREMVKKGFFPTPVEI-NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
           E   +V  M K+   P   +I   L+   C+      A   +   +  G   N++++  L
Sbjct: 684 EVTSLVSHM-KEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYL 742

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           + GF  +G  + A  +   +   + + D + +  IID L + G  +   +++  +     
Sbjct: 743 LSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKC 802

Query: 546 VPTVVTY 552
            P+  TY
Sbjct: 803 KPSDETY 809



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/324 (21%), Positives = 138/324 (42%), Gaps = 34/324 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN---AM 196
           D   Y   +E L KTK  +     +  M ++ +  +P   +Y +V   R  K RN   A 
Sbjct: 474 DTYTYSPFIENLCKTKGSREGLSFIDEMLQKDV--KPSTVNYTIVI-DRLFKERNYGLAT 530

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   M     +P+++   T++       +L +A   +  M+  GI  + + YN LI G+
Sbjct: 531 RIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGH 590

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY----------------LCKEKRIKEV 300
             + +   A+ ++  M      P+  +++ ++ +                + K   + +V
Sbjct: 591 TSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADV 650

Query: 301 RDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
            +L E M  +S              F ++ R++E   LV+ M +     +   YT++VN 
Sbjct: 651 FELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNC 710

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
           FC++     A  +L  M  HG  PN +SY   L+G    G++  A+E+      + +  +
Sbjct: 711 FCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTD 770

Query: 409 AITYSVVMHGLRREGKLSEACDVV 432
            I + +++ GL R+G      D++
Sbjct: 771 EIVWKIIIDGLIRQGHPDMCHDMI 794


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 214/432 (49%), Gaps = 24/432 (5%)

Query: 175 RPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
           +P  F  L   Y+ AG L  ++  L  M+    A      N+ I   V      KAL   
Sbjct: 53  QPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVY 112

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
             M  +G+ P+  T+N L+  +    R+    KL +EM  + CSP+ ++Y  ++  +CK 
Sbjct: 113 RVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCK- 171

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
                                  G +E+A ++   M   GC P++ TYT++++G  + G 
Sbjct: 172 ----------------------CGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGH 209

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           +D+A  + ++M   G     V Y + ++GL  +G++  A ++      +   P+ +T++ 
Sbjct: 210 VDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTS 269

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           +++GL   G+ SEA  + +E    G        N+LI +LC+  ++D A +   E    G
Sbjct: 270 LVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDG 329

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              +V  F +L+ G C+ G + +A  LL DM      PD   Y T+ID L K+GRVEEA 
Sbjct: 330 LVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAG 389

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-AYNQVIENLC 593
           +L+++M S G  P VVTY T+I   C+ GR+ED L+L E++ +K    T  YN ++  LC
Sbjct: 390 QLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGLC 449

Query: 594 SFGYLEEAGKIL 605
             G ++EA K+ 
Sbjct: 450 MAGRVDEAYKLF 461



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 212/440 (48%), Gaps = 24/440 (5%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           RY   P ++  +    +   L + +   L+ M          A++ L+ A+ +AG  + A
Sbjct: 49  RYILQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKA 108

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + V  +M ++ + P+    N  ++      ++    +  E MQ    +PNV+TY+ LI  
Sbjct: 109 LAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDA 168

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
            C    ++ A+K+  +M  +GC P+  +Y +++  L K                      
Sbjct: 169 VCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGK---------------------- 206

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G +++A  L  +M+  G +   V Y ++++G  R G  D A K+ ++M   G +P+ V
Sbjct: 207 -SGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHV 265

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           ++T+ + GL   G++ EAR +   + +     +   Y+V++  L +  +L EA ++  E+
Sbjct: 266 TFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGEL 325

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            + G  P     N L+  LC+ G++  A   + +    GC  +V  + +LI G  + G +
Sbjct: 326 EEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRV 385

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           EEA  LL +M     +PD VTY T+ID   K GR+E+A  L  ++ +KG   T VTY T+
Sbjct: 386 EEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANT-VTYNTI 444

Query: 556 IHRYCQVGRVEDLLKLLEKM 575
           ++  C  GRV++  KL   M
Sbjct: 445 LNGLCMAGRVDEAYKLFNGM 464



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 196/413 (47%), Gaps = 23/413 (5%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  +++   K    Q A  V R+M + G+      F+ LM A+ +A ++ +   +   M
Sbjct: 91  AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
           Q    +PN++  +  I  +     + KAL+    M+  G  PN+ TY  +I G      +
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHV 210

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNL 313
             A  L +EM  +G    +V Y +++  L +  R      L  +M         V  ++L
Sbjct: 211 DKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSL 270

Query: 314 FHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            +     GR  EA+ +  +   +GC  DV  Y  +++  C+   LD+A ++  ++   G 
Sbjct: 271 VYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGL 330

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            P+  ++ A ++GLC +G+  +A  ++   +    TP+   Y+ ++ GLR+ G++ EA  
Sbjct: 331 VPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQ 390

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           ++ EM   G+ P  V  N LI   C+ G+++ A +  +E   KG A N V + +++ G C
Sbjct: 391 LLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NTVTYNTILNGLC 449

Query: 491 QKGDLEEALSLLDDMYLCKK-------DPDTVTYTTIIDALSKNGRVEEATEL 536
             G ++EA  L + M   K+       DPD VTYTT+++   + G  E A  L
Sbjct: 450 MAGRVDEAYKLFNGM---KQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 139/318 (43%), Gaps = 33/318 (10%)

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           F   G  ++A  +   M Q G  PD  T+  ++N F +   +D   K+ ++M +  C PN
Sbjct: 99  FVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPN 158

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            ++Y+  ++ +C  G   +A ++    +     PN  TY+ ++ GL + G + +A  +  
Sbjct: 159 VITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFE 218

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM  +G   T V  N LI  L R G+ D A K  +E L+KG   + V FTSL+ G    G
Sbjct: 219 EMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAG 278

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
              EA  +  +        D   Y  +ID L K+ R++EA E+  ++   GLVP V T+ 
Sbjct: 279 RASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTF- 337

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
                                           N +++ LC  G + +A  +LG + R   
Sbjct: 338 --------------------------------NALMDGLCKSGRIHDAFILLGDMKRAGC 365

Query: 614 KADASTCHVLVESYLNKG 631
             D +  + L++     G
Sbjct: 366 TPDVTVYNTLIDGLRKSG 383



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 141/290 (48%), Gaps = 29/290 (10%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +VY  ++  L ++     A ++ R M  +G++     F+ L+     AG+   A  +   
Sbjct: 230 VVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQE 289

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
            +    A ++ + N  I  L    +L +A      ++  G+ P+V T+N L+ G C   R
Sbjct: 290 ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGR 349

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           I DA  L+ +M   GC+PD   Y T++  L K                        GR+E
Sbjct: 350 IHDAFILLGDMKRAGCTPDVTVYNTLIDGLRK-----------------------SGRVE 386

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA +L+ +M  +G  PDVVTY  +++  C+ G ++ A ++ +++   G   NTV+Y   L
Sbjct: 387 EAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTIL 445

Query: 382 NGLCHNGKSLEAREMINTSEEEW----WTPNAITYSVVMHGLRREGKLSE 427
           NGLC  G+  EA ++ N  ++E       P+ +TY+ +++G R+ G LSE
Sbjct: 446 NGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAG-LSE 494



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 163/345 (47%), Gaps = 4/345 (1%)

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           +  +  G+   G L+++ + L++M  H C     +Y + ++     G + +A  +     
Sbjct: 57  FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMG 116

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           +    P+  T++V+M+  ++  ++     +  EM  +   P  +  ++LI ++C+ G ++
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVE 176

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A K   +  ++GC  N+  +TS+I G  + G +++A  L ++M         V Y ++I
Sbjct: 177 KALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLI 236

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
             L ++GR + A +L  +MLSKGL P  VT+ ++++     GR  +  ++ ++      C
Sbjct: 237 HGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEA-RDVGC 295

Query: 582 R---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
                 YN +I+ LC    L+EA +I G++       D  T + L++     G    A+ 
Sbjct: 296 ALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFI 355

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +   M      PD+ +   + + L   G+ EEA  L+L     G+
Sbjct: 356 LLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGY 400



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 28/218 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  +Y ++++ L K+K    A  +   +   G+      F+ LM    ++G++ +A  +L
Sbjct: 298 DVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILL 357

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++A   P++ + NT I  L    ++ +A + L  MQ  G  P+V+TYN LI   C  
Sbjct: 358 GDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKG 417

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            RI+DA++L +E+  KG + + V+Y T++  LC                         GR
Sbjct: 418 GRIEDALRLFEEISAKGFA-NTVTYNTILNGLCM-----------------------AGR 453

Query: 320 IEEAKELVNQMSQM---GCI-PDVVTYTAVVNGFCRVG 353
           ++EA +L N M Q    G I PD VTYT ++NG  + G
Sbjct: 454 VDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAG 491


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 160/624 (25%), Positives = 290/624 (46%), Gaps = 42/624 (6%)

Query: 73  FRH--PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQIC-AVLRSQADERV---ALQ 126
           +RH  PL+     L  LRS          R+LL +L    +  A L + +  R+   A Q
Sbjct: 101 YRHLFPLLLSFVPLDPLRSLH--------RHLLGNLPSTPLADAALSAYSRLRLPHLAAQ 152

Query: 127 FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY 186
             +   R+ R R        +L  L+++        +    +   +   P  +++ ++ +
Sbjct: 153 LLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVH 212

Query: 187 SR--AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
           +    G L +A+  LS MQ   ++P+ +  NT ++       L +A   L RM+  G+ P
Sbjct: 213 THCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAP 272

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
              TYN L+  Y  L  IK A K+++ M   G  PD  +Y  +   LC+           
Sbjct: 273 TRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ----------- 321

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                        G+++EA  L ++M ++G + PDVVTY  + +   +      A ++L+
Sbjct: 322 ------------AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLE 369

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   G K   V++   + GLC +G+   A   +N   ++   P+ ITY+ ++H   + G
Sbjct: 370 EMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAG 429

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
            +++A  ++ EMV++G       +N ++ +LC+E + + A+  +Q    +G   + V++ 
Sbjct: 430 NIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYG 489

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           +++  + ++ + E AL L D+M   K  P   TY T+I  LS+ GR++EA + + +++ K
Sbjct: 490 TVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEK 549

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEA 601
           GLVP   TY  +IH YC+ G +E+  +   KM+  S +      N ++  LC  G L++A
Sbjct: 550 GLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKA 609

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
            K+    +    K D  T + L+++    G    A      M  R L PD      V   
Sbjct: 610 LKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSA 669

Query: 662 LILEGKSEEADTLMLRFVERGHIQ 685
           L   G++EEA  ++ +  E G + 
Sbjct: 670 LSEAGRTEEAQNMLHKLAESGTLS 693



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/552 (25%), Positives = 242/552 (43%), Gaps = 87/552 (15%)

Query: 166 LMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           L   +G    P+A +Y  L+ A+ R G L  A  +L+ M+K  VAP     NT +     
Sbjct: 227 LSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYAR 286

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS-PDKV 282
              + +A + +E M   G  P++ TYN L  G C   ++ +A +L DEM   G   PD V
Sbjct: 287 LGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVV 346

Query: 283 SYYTVMGYL----CKEKRIKEVRDLMEKMVNDSNLFHD--------QGRIEEAKELVNQM 330
           +Y T+        C    ++ + ++ EK V  + + H+         G +E A   +N+M
Sbjct: 347 TYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKM 406

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
           +  G  PDV+TY  +++  C+ G + +A  ++ +M   G K +T +    L  LC   + 
Sbjct: 407 ADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRY 466

Query: 391 LEAREMINTSEEEWWTPNAITYSVVM---------------------------------- 416
            EA+ ++ +  +  + P+ ++Y  VM                                  
Sbjct: 467 EEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTL 526

Query: 417 -HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
             GL R G+L EA D + E+++KG  P     N++I + C+EG ++ A +F  + +    
Sbjct: 527 IKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSF 586

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             +VV   +L+ G C  G L++AL L +      K  D +TY T+I  + K+G V+ A  
Sbjct: 587 KPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALH 646

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML------------------- 576
               M ++GL P   TY  V+    + GR E+   +L K+                    
Sbjct: 647 FFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSV 706

Query: 577 ----SKQKCRT--------------AYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
               S +  +T              AY +++  LC+ G  +EA  IL ++++     D+S
Sbjct: 707 DEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSS 766

Query: 619 TCHVLVESYLNK 630
           T   L+E  + +
Sbjct: 767 TYITLMEGLVKR 778



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 196/434 (45%), Gaps = 47/434 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  + +   K +    A R+L  M  +G++      + ++    + G+L  A+  L
Sbjct: 344 DVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCL 403

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M    +AP+++  NT IH       +AKA   ++ M   G+  +  T N ++   C  
Sbjct: 404 NKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKE 463

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE----KRIKEVRDLMEKMVNDSNLFH 315
            R ++A  L+   P +G  PD+VSY TVM    KE      ++   +++EK +  S   +
Sbjct: 464 KRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTY 523

Query: 316 DQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +         GR++EA + +N++ + G +PD  TY  +++ +C+ G+L+ A +   +M  
Sbjct: 524 NTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVE 583

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +  KP+ V+    +NGLC NGK  +A ++  +  E+    + ITY+ ++  + ++G +  
Sbjct: 584 NSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDT 643

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN------ 481
           A     +M  +G  P     N+++ +L   G+ + A+  + +    G      +      
Sbjct: 644 ALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKP 703

Query: 482 -----------------------------FTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
                                        +T L+ G C  G  +EA ++LD+M       
Sbjct: 704 SSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSV 763

Query: 513 DTVTYTTIIDALSK 526
           D+ TY T+++ L K
Sbjct: 764 DSSTYITLMEGLVK 777



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 119/261 (45%), Gaps = 12/261 (4%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  +++ LS+    + A   L  +  +G+      ++ ++ AY + G L NA    + M
Sbjct: 522 TYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKM 581

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            + +  P+++ CNT ++ L +  KL KAL+  E     G   +V+TYN LI+  C    +
Sbjct: 582 VENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDV 641

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------ 316
             A+    +M  +G  PD  +Y  V+  L +  R +E ++++ K+     L         
Sbjct: 642 DTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLL 701

Query: 317 -QGRIEEAKELVNQMSQMGCIPDVV-----TYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
               ++EA+   +  ++   + +        YT +VNG C  G+  +AK +L +M   G 
Sbjct: 702 KPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGM 761

Query: 371 KPNTVSYTAFLNGLCHNGKSL 391
             ++ +Y   + GL    K L
Sbjct: 762 SVDSSTYITLMEGLVKRQKRL 782


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 250/538 (46%), Gaps = 43/538 (7%)

Query: 122 RVALQFFYWADRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLR-------------- 165
           ++AL+F  W  +Q     D IV  + +   IL + ++   A+ +L+              
Sbjct: 51  KLALKFLKWVVKQPGLDTDHIVQLFCITTHILVRARMYDPARHILKELSLMSGKSSFVFG 110

Query: 166 -LMAR-RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
            LMA  R     P  F  L+  Y R G +++++ +  +M      P++  CN  +  +V 
Sbjct: 111 ALMATYRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVK 170

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
             +      FL+ M    I P+V T+N LI   C     K +  L+ +M   G +P  V+
Sbjct: 171 SCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVT 230

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           Y TV+ + CK                       +GR + A EL++ M+  G   DV TY 
Sbjct: 231 YNTVLHWYCK-----------------------KGRFKAAIELLDHMNLKGVNADVCTYN 267

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            +++  CR     +   +L+ M      PN V+Y   LNG  + GK L AR+++N     
Sbjct: 268 MLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTF 327

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
             +PN +T++ ++ G   EG   EA  +   M  KG   T V   +L+  LC+  + D A
Sbjct: 328 GLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLA 387

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           + F       G  V  + +T +I G C+ G L+EA+ +L++M     DPD VTY+ +I+ 
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALING 447

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC-- 581
             + GR++ A E++ ++   GL P  + Y T+I+  C++G +++ +++ E M+ +     
Sbjct: 448 FCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPD 507

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
              +N ++ +LC  G + EA + +  +       +A +   L+  Y + G  L A+ V
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSV 565



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 141/572 (24%), Positives = 251/572 (43%), Gaps = 50/572 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y    + Y  +L    K    + A  +L  M  +G+      ++ L+    R+ +     
Sbjct: 224 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGY 283

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M+K  + PN +  NT ++      K+  A + L  M   G++PN +T+N LI G+
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGH 343

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
                 K+A+K+   M  KG    +VSY  ++  LCK       R    +M  +      
Sbjct: 344 ISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  +     G ++EA  ++N+MS+ G  PD+VTY+A++NGFCRVG L  AK+++ +
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCR 463

Query: 365 MYHHGCKPNTVSYTAFL-----------------------------------NGLCHNGK 389
           +Y  G  PN + Y+  +                                     LC  GK
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGK 523

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             EA E +     +   PNA+++  +++G    G+  +A  V  EM K G  PT      
Sbjct: 524 VAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L++ LC+ G +  A+KF++   N   AV+ V   +LI   C+ G+L++A+SL  +M    
Sbjct: 584 LLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRS 643

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG-LVPTVVTYRTVIHRYCQVGRVEDL 568
             PD+ TYT++I  L + G+   A     +  ++G LVP  V Y   +    + G+ +  
Sbjct: 644 ILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAG 703

Query: 569 LKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
               ++M  L   +     N +I+     G +E+   +L ++       + +T ++L+  
Sbjct: 704 FYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHG 763

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           Y  +     ++ +   M    ++PD   C  +
Sbjct: 764 YSKRKHVSTSFMLYRSMILSGILPDKLTCYSI 795



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 131/583 (22%), Positives = 245/583 (42%), Gaps = 64/583 (10%)

Query: 149  EILSKTKLCQGAKRVLRLMARRGIECR-------PEAFSYLMVAYS--RAGKLRNAMYVL 199
            +I++ + L  G  RV RL   + I CR       P    Y  + Y+  R G L+  + + 
Sbjct: 437  DIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIY 496

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
              M      P+    N  +  L    K+A+A  F+  M   GI PN ++++CLI GY   
Sbjct: 497  EAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSS 556

Query: 260  HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
                 A  + DEM   G  P   +Y +++  LCK   +      ++ + N     D+ + 
Sbjct: 557  GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMC 616

Query: 315  HD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
            +         G +++A  L  +M Q   +PD  TYT++++G CR G+   A    ++   
Sbjct: 617  NTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 368  HG-CKPNTVSYTAFLNGLCHNGKSLEA-------------REMINTSE------------ 401
             G   PN V YT F++G+   G+                 R+++ T+             
Sbjct: 677  RGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIE 736

Query: 402  ----------EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
                       +   PN  TY++++HG  +   +S +  + R M+  G  P  +    +I
Sbjct: 737  KTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSII 796

Query: 452  QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
              +C    ++   K ++  + +G  V+   F  LI   C  G++  A  +++ M      
Sbjct: 797  LGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGIS 856

Query: 512  PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
             D  T   I+  L++N R +E+  ++ +M  +G+ P    Y  +++  C+VG ++    +
Sbjct: 857  LDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVV 916

Query: 572  LEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
             E+M++ + C    A + ++  L   G  +EA  +L  +L+       ++   L+  +  
Sbjct: 917  KEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCK 976

Query: 630  KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
             G    A ++   M N  L  DL     VS  +++ G   + D
Sbjct: 977  NGNVTEALELRVVMSNCGLKLDL-----VSYNVLITGLCAKGD 1014



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 121/546 (22%), Positives = 230/546 (42%), Gaps = 58/546 (10%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            D   + +++  L K      A+  +R M   GI     +F  L+  Y  +G+   A  V 
Sbjct: 507  DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVF 566

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
              M K    P      + +  L  G  L  A +FL+ +Q      + +  N LI   C  
Sbjct: 567  DEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKS 626

Query: 260  HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ-- 317
              +  A+ L  EM  +   PD  +Y +++  LC++ +        ++     NL  ++  
Sbjct: 627  GNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVM 686

Query: 318  -----------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                       G+ +       QM ++G   DVVT  A+++G+ R+G++++   +L +M 
Sbjct: 687  YTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMG 746

Query: 367  HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT-YSVVMHGLRREGKL 425
            +    PN  +Y   L+G         +  +  +       P+ +T YS+++ G+     L
Sbjct: 747  NQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIIL-GICESNML 805

Query: 426  SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA--------- 476
                 +++  + +G        N+LI   C  G+++ A   +    + G +         
Sbjct: 806  EIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAI 865

Query: 477  VNVVN--------------------------FTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
            V+V+N                          +  L+ G C+ GD++ A  + ++M   K 
Sbjct: 866  VSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKI 925

Query: 511  DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
             P  V  + ++ AL+K G+ +EA+ L+  ML   LVPT+ ++ T++H +C+ G V + L+
Sbjct: 926  CPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALE 985

Query: 571  LLEKMLSKQKCR-----TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            L   M     C       +YN +I  LC+ G +  A ++  ++ R    A+ +T   LV 
Sbjct: 986  LRVVM---SNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVG 1042

Query: 626  SYLNKG 631
              L++G
Sbjct: 1043 GILSQG 1048



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 200/468 (42%), Gaps = 17/468 (3%)

Query: 124  ALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
             L+ F   D   +  H P    Y  +L+ L K      A++ L+ +            + 
Sbjct: 559  GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNT 618

Query: 182  LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
            L+ A  ++G L  A+ +   M + ++ P+     + I  L    K   A+ F +  +  G
Sbjct: 619  LITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARG 678

Query: 242  -ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
             + PN + Y C + G     + K       +M   G + D V+   ++    +  +I++ 
Sbjct: 679  NLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKT 738

Query: 301  RDLMEKMVNDSN---------LFHDQGR---IEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             DL+ +M N +          L H   +   +  +  L   M   G +PD +T  +++ G
Sbjct: 739  HDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILG 798

Query: 349  FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
             C    L+   K+L+     G + +  ++   ++  C NG+   A +M+N       + +
Sbjct: 799  ICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLD 858

Query: 409  AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
              T   ++  L R  +  E+  V+ EM K+G  P   +   L+  LCR G +  A    +
Sbjct: 859  KNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKE 918

Query: 469  ECL-NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            E + +K C  NV   ++++R   + G  +EA  LL  M   K  P   ++TT++    KN
Sbjct: 919  EMIAHKICPPNVAE-SAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKN 977

Query: 528  GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            G V EA EL + M + GL   +V+Y  +I   C  G +    +L E+M
Sbjct: 978  GNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEM 1025



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/327 (20%), Positives = 143/327 (43%), Gaps = 35/327 (10%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            D +  Y ++  + ++ + +   ++L+    RG+E     F+ L+      G++  A  ++
Sbjct: 788  DKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMV 847

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            ++M    ++ +   C+  + VL   ++  ++   L  M   GI+P    Y  L+ G C +
Sbjct: 848  NVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRV 907

Query: 260  HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
              IK A  + +EM      P  V+   ++  L K                        G+
Sbjct: 908  GDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK-----------------------CGK 944

Query: 320  IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
             +EA  L+  M +M  +P + ++T +++ FC+ G + +A ++   M + G K + VSY  
Sbjct: 945  ADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNV 1004

Query: 380  FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV-REMVKK 438
             + GLC  G    A E+    + + +  N  TY  ++ G+  +G      D++ ++++ +
Sbjct: 1005 LITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLAR 1064

Query: 439  GF-----------FPTPVEINLLIQSL 454
            GF           FP  + +N  ++ L
Sbjct: 1065 GFITAMSFNHMINFPQQISVNAYLKHL 1091


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 228/483 (47%), Gaps = 35/483 (7%)

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
           G +  L+ M  RG+ C   A    + A++RAG    A+                    A+
Sbjct: 73  GVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFY---------------RAV 117

Query: 219 HVLVVGNK-LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           H L       A AL+   R   AG T             C  +R+  A K++DEM  KGC
Sbjct: 118 HDLGCARPHRAAALQPPHRRAAAGRT----------WALCQNNRVGAARKMLDEMARKGC 167

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------QGRIEEAKELVNQM 330
            PD V+Y T++  LCK  R+ E  +++  M   +  ++        + R++E   +V+ M
Sbjct: 168 PPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDM 227

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              G  P+V+TYT +V+ FC+ GEL  A  +L +M   GC PN V++TA + GL  +G+ 
Sbjct: 228 VGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRV 287

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            +A +M      E W P+ ++Y++++ GL   G L  A  ++  M + G FP     + L
Sbjct: 288 HDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTL 347

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I    + G + GA     +    GC  NVV +T+++  FC+K    +A SL+D M L   
Sbjct: 348 IDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENC 407

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P+TVT+ T+I +L    RV  A  +  +M   G VP   TY  +IH   + G   D L 
Sbjct: 408 PPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALH 467

Query: 571 LLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           ++ +M S   +     YN V+  LC      EA   +GK++    + +A T   ++ +Y 
Sbjct: 468 MVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYC 527

Query: 629 NKG 631
            +G
Sbjct: 528 KEG 530



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 202/431 (46%), Gaps = 21/431 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  ++ +L K      A  VL  M        P A SY  +++A  R  +++    
Sbjct: 170 DDVTYATIVSVLCKLDRLDEATEVLAAMP-------PVAASYNAIVLALCREFRMQEVFS 222

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V+S M    + PN++   T +       +L  A   L RM + G TPNV+T+  L++G  
Sbjct: 223 VVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLF 282

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
           D  R+ DA+ +   M  +G +P  VSY  ++  LC    +K    ++  M          
Sbjct: 283 DDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVR 342

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 + F   G +  A  + N MS+ GC P+VV YT +V+ FC+    +QAK ++ +M
Sbjct: 343 TYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKM 402

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
               C PNTV++   +  LC   +   A  + +        PN  TY+ ++HGL REG  
Sbjct: 403 LLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNC 462

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A  +V EM   G   + V  N ++  LC+      A  F+ + + +G   N   F+++
Sbjct: 463 GDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAI 522

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I  +C++G++  A  +L  M +     + + YT ++  L    ++ +A   ++KML +G+
Sbjct: 523 IHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGI 582

Query: 546 VPTVVTYRTVI 556
            P  VT+  ++
Sbjct: 583 YPNTVTWNVLV 593



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 153/330 (46%), Gaps = 15/330 (4%)

Query: 120 DERV--ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           D RV  AL  + W   +  +    + Y +++  L      +GA  +L  M + G      
Sbjct: 284 DGRVHDALDMWRWMVAE-GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVR 342

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            +S L+  +S+AG L  A+ + + M ++   PN+++    + V        +A   +++M
Sbjct: 343 TYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKM 402

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
            L    PN +T+N LI+  CD  R+  A+ +  EM   GC P+  +Y  ++  L +E   
Sbjct: 403 LLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNC 462

Query: 298 KEVRDLMEKM----VNDSNLFHD-------QGRIE-EAKELVNQMSQMGCIPDVVTYTAV 345
            +   ++ +M    +  S + ++       Q R+  EA   V +M   G  P+  T++A+
Sbjct: 463 GDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAI 522

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++ +C+ GE+  A  ML  M    C  N + YT  +  LC+  K ++A   +     E  
Sbjct: 523 IHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGI 582

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREM 435
            PN +T++V++ G+ R     E  D ++ +
Sbjct: 583 YPNTVTWNVLVRGVFRNLGCIEPSDFIQHI 612



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/243 (19%), Positives = 100/243 (41%), Gaps = 14/243 (5%)

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL----LDDMY 506
           ++ L   G +DG +  +QE   +G         + +  F + G  + AL      + D+ 
Sbjct: 62  VRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLG 121

Query: 507 LCK-------KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
             +       + P          AL +N RV  A +++ +M  KG  P  VTY T++   
Sbjct: 122 CARPHRAAALQPPHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVL 181

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
           C++ R+++  ++L  M        +YN ++  LC    ++E   ++  ++    + +  T
Sbjct: 182 CKLDRLDEATEVLAAM---PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVIT 238

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
              +V+++   G   +A  +  RM      P++     +   L  +G+  +A  +    V
Sbjct: 239 YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMV 298

Query: 680 ERG 682
             G
Sbjct: 299 AEG 301


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 249/561 (44%), Gaps = 53/561 (9%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR 162
           L SL P  +   + +      AL+FF  A  +     +  +Y  ++ +L  +KL   A+ 
Sbjct: 25  LSSLTPDSLITTVLNCRSPWKALEFFNAAPEK-----NIQLYSAIIHVLVGSKLLSHARY 79

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV--------------------LSMM 202
           +L  + +  ++   + +    +A+S   +L+++ +                     LSM 
Sbjct: 80  LLNDLVQNLVKSH-KPYHACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMY 138

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            K   A  +  CN  ++VLV   +     R  E M   G++P+V+T+  LI G C    +
Sbjct: 139 HKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDL 198

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDSNLF 314
             A ++ DEM +KG  P  + Y  ++  LC + +I+E   +   M        V   N  
Sbjct: 199 LRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTL 258

Query: 315 HDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            D        ++A  L   M   G +PDVVT+  +++G C+ GE+  A+ +   M     
Sbjct: 259 MDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSV 318

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PN   Y + ++  C  G   EA  +    E    +P+  TYS+++ GL    +  EA +
Sbjct: 319 TPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGN 378

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +  +M K+G     V  N LI   C+EGKMD A +   +    G   NV+ F++LI G+C
Sbjct: 379 IFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYC 438

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +  +L+ A+ +  +M +    PD VTYT +ID   K G ++EA +L   ML  G+ P   
Sbjct: 439 KIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCY 498

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---------------TAYNQVIENLCSF 595
           T   ++   C+ G++ D L+L  + +  Q  R                AY  +I  LC  
Sbjct: 499 TISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQD 558

Query: 596 GYLEEAGKILGKVLRTASKAD 616
           G   +A K+   + R   + D
Sbjct: 559 GQFSKAVKLFSDMRRYGLQPD 579



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 204/481 (42%), Gaps = 68/481 (14%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           ++L +L KT   +   R+   M   G+      F  L+    R G L  A  +   M+  
Sbjct: 152 VLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVK 211

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            + P +++    I  L   NK+ +A      M+  G+ PNV TYN L+ GYC L   K A
Sbjct: 212 GIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQA 271

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NL 313
           ++L  +M  +G  PD V++  ++  LCK   +K  R+L   M+  S            + 
Sbjct: 272 LRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDA 331

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           +   G + EA  L  ++ +    PDV TY+ ++ G C V   ++A  + ++M   G   N
Sbjct: 332 YCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILAN 391

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG---LR---------- 420
           +V+Y + ++G C  GK  +A E+ +   E    PN IT+S ++ G   +R          
Sbjct: 392 SVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYS 451

Query: 421 ----------------------REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                                 + G + EA  +  +M+  G  P    I+ L+  LC++G
Sbjct: 452 EMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDG 511

Query: 459 KMDGAKKFMQECL-------------NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
           K+  A +   E +             +K    N V +T+LI G CQ G   +A+ L  DM
Sbjct: 512 KISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDM 571

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMM---KMLSKGLVPTVVTYRTVIHRYCQV 562
                 PD V Y  ++  L +   +     LMM    ML  G++P    +  +   Y + 
Sbjct: 572 RRYGLQPDEVIYVVMLRGLFQVKYI-----LMMLHADMLKFGVIPNSAVHVILCECYQES 626

Query: 563 G 563
           G
Sbjct: 627 G 627



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 127/250 (50%), Gaps = 4/250 (1%)

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           +P+ IT+  ++ G  R+G L  A ++  EM  KG  PT +   +LI+ LC + K++ A+ 
Sbjct: 179 SPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAES 238

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             +     G   NV  + +L+ G+C+  + ++AL L  DM      PD VT+  +ID L 
Sbjct: 239 MHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLC 298

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL---LEKMLSKQKCR 582
           K G ++ A  L + M+   + P +  Y ++I  YC+VG V + + L   LE+        
Sbjct: 299 KFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVF 358

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
           T Y+ +I  LCS    EEAG I  K+ +    A++ T + L++    +G    A ++  +
Sbjct: 359 T-YSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQ 417

Query: 643 MFNRNLIPDL 652
           M    + P++
Sbjct: 418 MTENGVEPNV 427



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 115/237 (48%), Gaps = 2/237 (0%)

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N+L+  L + G+ +   +  +E ++ G + +V+ F +LI G C++GDL  A  + D+M +
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P  + YT +I  L  + ++EEA  +   M   G+ P V TY T++  YC++   + 
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQ 270

Query: 568 LLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            L+L + ML +        +  +I+ LC FG ++ A  +   +++ +   + +  + L++
Sbjct: 271 ALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLID 330

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +Y   G    A  +   +    + PD+     +   L    ++EEA  +  +  + G
Sbjct: 331 AYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEG 387


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 218/443 (49%), Gaps = 26/443 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           MA R        ++ L+    +A K R+A+ +L +M       +++   T I  L     
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L  A   L++M  AG  PNV+TY  LI G C   R  DAI+ +  M   GC PD V+Y +
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LC   R+ +   +++++                      M + G IPDVVTY   +
Sbjct: 121 LIHGLCMANRMDDAGLVLQEL----------------------MIESGRIPDVVTYNTFI 158

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C+ G+LD+  +ML++M   G  P+ V++ + ++GLC   +  +A ++     E    
Sbjct: 159 SGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCV 218

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+++TYS+++  L R  +L    +V+  MVK G +        LI +L R G ++ A   
Sbjct: 219 PDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWA 278

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            ++ +  GC + V    + I   C+ G    A ++L  M      P+ ++Y  +ID L K
Sbjct: 279 YEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCK 338

Query: 527 NGRVEEATELMMKMLSKGLV-PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---R 582
           +G V++A +L  KML  G   P V+ + T+I  +C+ GR+    +LL++M +K  C    
Sbjct: 339 SGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDV 398

Query: 583 TAYNQVIENLCSFGYLEEAGKIL 605
             YN +I+    FG L++A  +L
Sbjct: 399 VTYNTMIDGQSKFGSLKQAKLLL 421



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 220/445 (49%), Gaps = 30/445 (6%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
            +R D  +Y  ++  L K +  + A  +L +MA  G +     ++ L+    ++G L  A
Sbjct: 5   HFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAA 64

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +L  M  A  APN++     I  L    +   A++ ++RM  +G  P+++TYN LI G
Sbjct: 65  QALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHG 124

Query: 256 YCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
            C  +R+ DA  ++ E+ ++ G  PD V+Y T +  LCK                     
Sbjct: 125 LCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCK--------------------- 163

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G++++  E++ +M + G  PDVVT+ ++++G C+   +D A ++ + M   GC P++
Sbjct: 164 --AGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDS 221

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           ++Y+  L+ L    +     E++    +      + TY+ ++H L R G +  A     +
Sbjct: 222 LTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQ 281

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
            ++ G        N  I +LCR GK   AK  +   +  G   N++++  +I G C+ G+
Sbjct: 282 AMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGN 341

Query: 495 LEEALSL---LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL-VPTVV 550
           +++A  L   + D   CK  PD + + T+I    K GR+ +A +L+ +M +K + VP VV
Sbjct: 342 VDDAWKLSRKMLDSGCCK--PDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVV 399

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY T+I    + G ++    LLE+M
Sbjct: 400 TYNTMIDGQSKFGSLKQAKLLLEEM 424



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 188/388 (48%), Gaps = 45/388 (11%)

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A EL++ M+  G    VVTYT +++G C+ G+LD A+ +LQ+M   GC PN V+YTA +
Sbjct: 28  HALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALI 87

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE-MVKKGF 440
           +GLC   +  +A + +         P+ +TY+ ++HGL    ++ +A  V++E M++ G 
Sbjct: 88  DGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGR 147

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  V  N  I  LC+ GK+D   + ++E    G + +VV F S+I G C+   +++A  
Sbjct: 148 IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQ 207

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           +   M      PD++TY+ ++D LS+  R++   E++  M+  G      TY  +IH   
Sbjct: 208 VFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALI 267

Query: 561 QVGRVEDLLKLLEKMLSK--------------QKCRT----------------------- 583
           + G +E      E+ +                  CR+                       
Sbjct: 268 RAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLL 327

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTA-SKADASTCHVLVESYLNKGIPLLAYKVACR 642
           +YN VI+ LC  G +++A K+  K+L +   K D    + L+  +   G    A ++   
Sbjct: 328 SYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKE 387

Query: 643 MFNRNL-IPDLKLCKKVSERLILEGKSE 669
           M  +N+ +PD+     V+   +++G+S+
Sbjct: 388 MKAKNICVPDV-----VTYNTMIDGQSK 410


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 287/595 (48%), Gaps = 19/595 (3%)

Query: 104 RSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
           +SL P+++  +L+S+ +   AL  F    R   Y H P V++ +L+ L   KL     R+
Sbjct: 6   KSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRI 65

Query: 164 LRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA-AVAPNLLICNTAIHVLV 222
           + L+  +  +C  +    ++ AY++      A+ +   M +     P +   N+ ++ L+
Sbjct: 66  VELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALI 125

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
             NK  +A  F    +  G++PN+ TYN LIK  C   +   A +L++ M  +G SPD  
Sbjct: 126 ESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVF 185

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKM--------VNDSNL----FHDQGRIEEAKELVNQM 330
           SY T++  L K   + +   L ++M        V   N+    F  +G I  A E+  ++
Sbjct: 186 SYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL 245

Query: 331 SQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
            +   + P++ +Y  ++NG C+ G+ D++ ++  +M  +    +  +Y+  ++GLC +G 
Sbjct: 246 LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 305

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
              A  +     E   +P+ + Y+ +++G  R G++ E  ++ + M K+G   T V  N+
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNI 364

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI+ L    K+D A    +    K C  + + +  L+ G C+ G L +ALS+L++    +
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 424

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
            D DT  Y+++I+ L + GR++E   ++ +M   G  P       VI+ + +  ++ED L
Sbjct: 425 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484

Query: 570 KLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           +    M+SK    T   YN +I  L       EA  ++ ++L    K +  T  +L+   
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG- 543

Query: 628 LNKGIPL-LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
           L +G  L +A  + C+   +   PD+K+   +   L   GK E+A  L     +R
Sbjct: 544 LCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 598



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 246/531 (46%), Gaps = 19/531 (3%)

Query: 116 RSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECR 175
           + Q D+   L  + W   +  +  D   Y  ++  L+K      A ++   M  RG+   
Sbjct: 162 KKQFDKAKELLNWMW---EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPD 218

Query: 176 PEAFSYLMVAYSRAGKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
              ++ L+  + + G + NA  +   +++  +V PN+   N  I+ L    K  ++    
Sbjct: 219 VACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIW 278

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
            RM+      ++ TY+ LI G C    +  A ++  EM   G SPD V Y T++    + 
Sbjct: 279 HRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 338

Query: 295 KRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
            RI+E  +L + M  +              LF +  +++EA  +   + +  C  D +TY
Sbjct: 339 GRIEECLELWKVMEKEGCRTVVSYNILIRGLF-ENAKVDEAISIWELLPEKDCCADSMTY 397

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             +V+G C+ G L++A  +L++  +     +T +Y++ +NGLC  G+  E   +++   +
Sbjct: 398 GVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK 457

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               PN    + V++G  R  KL +A      MV KG FPT V  N LI  L +  +   
Sbjct: 458 HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSE 517

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A   ++E L+KG   N++ ++ L+ G CQ   L+ AL+L          PD   +  II 
Sbjct: 518 AYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIH 577

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQK 580
            L  +G+VE+A +L  +M  +  VP +VT+ T++  + +V   E   K+ + +L    Q 
Sbjct: 578 GLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQP 637

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
              +YN  ++ LCS   + +A   L   +       A T ++LV + L+ G
Sbjct: 638 DIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNG 688



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 145/299 (48%), Gaps = 12/299 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y +++  L K      A  +L        +    A+S ++    R G+L     VL
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 452

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M K    PN  +CN  I+  V  +KL  ALRF   M   G  P V+TYN LI G    
Sbjct: 453 DQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 512

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL----MEKMVNDSNLFH 315
            R  +A  L+ EM  KG  P+ ++Y  +M  LC+ K++    +L    +EK        H
Sbjct: 513 ERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH 572

Query: 316 D--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +         G++E+A +L ++M Q  C+P++VT+  ++ GF +V + ++A K+   +  
Sbjct: 573 NIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 632

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
           +G +P+ +SY   L GLC   +  +A   +N + +    P AIT+++++  +   G L+
Sbjct: 633 YGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGALT 691



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 167/374 (44%), Gaps = 4/374 (1%)

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           N   +  + +EA+        MG  P++ TY  ++   CR  + D+AK++L  M+  G  
Sbjct: 122 NALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFS 181

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+  SY   +N L  NG   +A ++ +   E   TP+   Y++++ G  ++G +  A ++
Sbjct: 182 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 241

Query: 432 VREMVK-KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
              ++K    +P     N++I  LC+ GK D + +            ++  +++LI G C
Sbjct: 242 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
             G+L+ A  +  +M      PD V Y T+++   + GR+EE  EL  K++ K    TVV
Sbjct: 302 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLEL-WKVMEKEGCRTVV 360

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKV 608
           +Y  +I    +  +V++ + + E +  K  C  +  Y  ++  LC  GYL +A  IL + 
Sbjct: 361 SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA 420

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
                  D      ++     +G       V  +M      P+  +C  V    +   K 
Sbjct: 421 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKL 480

Query: 669 EEADTLMLRFVERG 682
           E+A       V +G
Sbjct: 481 EDALRFFGNMVSKG 494



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/403 (21%), Positives = 167/403 (41%), Gaps = 46/403 (11%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
            D   Y  ++  L  +    GA RV + MA  G+      ++ ++  Y RAG++   + +
Sbjct: 288 QDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLEL 347

Query: 199 LSMMQK----AAVAPNLLI------------------------CNTA------IHVLVVG 224
             +M+K      V+ N+LI                        C  +      +H L   
Sbjct: 348 WKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKN 407

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             L KAL  LE  +      +   Y+ +I G C   R+ +   ++D+M   GC P+    
Sbjct: 408 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC 467

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
             V+    +  ++++       MV+              N      R  EA  LV +M  
Sbjct: 468 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLH 527

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G  P+++TY+ ++NG C+  +LD A  +  Q    G KP+   +   ++GLC +GK  +
Sbjct: 528 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A ++ +  ++    PN +T++ +M G  +      A  +   +++ G  P  +  N+ ++
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLK 647

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            LC   ++  A  F+ + +++G     + +  L+R     G L
Sbjct: 648 GLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 260/498 (52%), Gaps = 26/498 (5%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           +L+A+ G +    +++ L+    R G  R A+  L  +      PN+ + NT I  L   
Sbjct: 88  KLLAQ-GFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKY 146

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             +++A      M + GI+ NV+TY+ LI G+C + ++K+A+ L++ M LK  +P+  +Y
Sbjct: 147 QLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTY 206

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVN---DSNLFHDQG---------RIEEAKELVNQMSQ 332
             ++  LCKE ++KE + ++  M+     SN+               +++A+ + N MS 
Sbjct: 207 NILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSL 266

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           MG  PDV +Y  ++NGFC++  +D+A  + ++M      P  + +   L+          
Sbjct: 267 MGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYST 325

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A  + +  E +   P+  T +++++     G+++    V+ +++K+G+ P+ V +N LI+
Sbjct: 326 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIK 385

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC +G++  A  F  + L +G  +N V++ +LI G C+ GD   A+ LL  +      P
Sbjct: 386 GLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKP 445

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           +   Y+TIIDAL K   V EA  L  +M  KG+   VVTY T+I+ +C VG++++ + LL
Sbjct: 446 NVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLL 505

Query: 573 EKMLSKQ---KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
            +M+ K      RT Y  +++ L   G ++EA  +L  +L+   K D  T + L+  Y  
Sbjct: 506 NEMVLKTINPDVRT-YTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGY-- 562

Query: 630 KGIPLLAYKV--ACRMFN 645
               LL Y+V  A  +FN
Sbjct: 563 ----LLVYEVKKAQHVFN 576



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 146/584 (25%), Positives = 274/584 (46%), Gaps = 17/584 (2%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            D R A++F    D +   + +  +Y  +++ L K +L   A  +   M  +GI      
Sbjct: 112 GDTRAAIKFLRKIDGRLA-KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVT 170

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           +S L+  +   GKL+ A+ +L++M    + PN+   N  +  L    K+ +A   L  M 
Sbjct: 171 YSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVML 230

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
            A +  NV+TY+ L+ GY  ++ +K A  + + M L G +PD  SY  ++   CK KR+ 
Sbjct: 231 KACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVD 290

Query: 299 EVRDLMEKMVNDS-----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +  +L ++M+              + F        A  L +++   G  PD+ T   ++N
Sbjct: 291 KALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILIN 350

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
            FC +G++     +L ++   G  P+TV+    + GLC  G+  +A    +    + +  
Sbjct: 351 CFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL 410

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           N ++Y+ +++G+ + G    A  ++R++  +   P     + +I +LC+   +  A    
Sbjct: 411 NQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLF 470

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            E   KG + +VV +++LI GFC  G L+EA+ LL++M L   +PD  TYT ++DAL K 
Sbjct: 471 SEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKE 530

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC---QVGRVEDLLKLLEKMLSKQKCRTA 584
           G+V+EA  ++  ML   + P V TY T+++ Y    +V + + +   +  M       T 
Sbjct: 531 GKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHT- 589

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           Y  +I   C    ++EA  +  ++ +     D  T   LV+     G     + +   M 
Sbjct: 590 YTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMR 649

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           +R    D+     + + L   G  ++A  L  +  ++G I+P +
Sbjct: 650 DRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQG-IRPNT 692



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 239/515 (46%), Gaps = 26/515 (5%)

Query: 138 RHDPIVYY-MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           R  PI+ +  +L+  +K K    A  +   +  +GI+      + L+  +   G++    
Sbjct: 303 RFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGF 362

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            VL+ + K    P+ +  NT I  L +  ++ KAL F +++   G   N ++Y  LI G 
Sbjct: 363 SVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV 422

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C +   + AIKL+ ++  +   P+   Y T++  LCK + +                   
Sbjct: 423 CKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV------------------- 463

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
                EA  L ++M+  G   DVVTY+ ++ GFC VG+L +A  +L +M      P+  +
Sbjct: 464 ----SEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRT 519

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YT  ++ L   GK  EA+ ++    +    P+  TY+ +M+G     ++ +A  V   M 
Sbjct: 520 YTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMS 579

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
             G  P      +LI   C+   +D A    +E   K    + V ++SL+ G C+ G + 
Sbjct: 580 LMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRIS 639

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
               L+D+M    +  D +TY ++ID L KNG +++A  L  KM  +G+ P   T+  ++
Sbjct: 640 YVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILL 699

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASK 614
              C+ GR++D  ++ + +L+K        YN +I   C  G LEEA  +L K+      
Sbjct: 700 DGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCI 759

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
            +A T  +++ +   K     A K+  +M  R L+
Sbjct: 760 PNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 219/497 (44%), Gaps = 50/497 (10%)

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           A +L  L ++   G  P+ +T N LIKG C   ++K+A+   D++  +G   ++VSY T+
Sbjct: 45  AVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATL 104

Query: 288 MGYLCK----EKRIKEVRDLMEKMVNDS----NLFHDQ----GRIEEAKELVNQMSQMGC 335
           +  +C+       IK +R +  ++   +    N   D       + EA  L ++M+  G 
Sbjct: 105 INGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGI 164

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
             +VVTY+ ++ GFC VG+L +A  +L  M      PN  +Y   ++ LC  GK  EA+ 
Sbjct: 165 SANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKS 224

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           ++    +     N ITYS +M G     ++ +A  V   M   G  P     N++I   C
Sbjct: 225 VLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFC 284

Query: 456 REGKMDGAKKFMQECL----------------------------------NKGCAVNVVN 481
           +  ++D A    +E +                                   KG   ++  
Sbjct: 285 KIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFT 344

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
              LI  FC  G +    S+L  +      P TVT  T+I  L   G+V++A     K+L
Sbjct: 345 LNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLL 404

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM---LSKQKCRTAYNQVIENLCSFGYL 598
           ++G     V+Y T+I+  C++G     +KLL K+   L+K      Y+ +I+ LC +  +
Sbjct: 405 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVE-MYSTIIDALCKYQLV 463

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
            EA  +  ++      AD  T   L+  +   G    A  +   M  + + PD++    +
Sbjct: 464 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTIL 523

Query: 659 SERLILEGKSEEADTLM 675
            + L  EGK +EA +++
Sbjct: 524 VDALGKEGKVKEAKSVL 540



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 173/377 (45%), Gaps = 28/377 (7%)

Query: 259 LHRIKDAIKL--IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           +  + DA+ L  + ++  +G  PD V+  T++  LC + ++KE              FHD
Sbjct: 39  IQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALH-----------FHD 87

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +        L+ Q  Q+    + V+Y  ++NG CR+G+   A K L+++     KPN   
Sbjct: 88  K--------LLAQGFQL----NQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEM 135

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   ++ LC      EA  + +    +  + N +TYS +++G    GKL EA  ++  MV
Sbjct: 136 YNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMV 195

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            K   P     N+L+ +LC+EGK+  AK  +   L      NV+ +++L+ G+    +++
Sbjct: 196 LKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVK 255

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +A  + + M L    PD  +Y  +I+   K  RV++A  L  +M+     P ++ +  ++
Sbjct: 256 KAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRF-PPIIQFNKIL 314

Query: 557 HRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
             + ++      + L  ++  K  Q      N +I   C  G +     +L K+L+    
Sbjct: 315 DSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYP 374

Query: 615 ADASTCHVLVESYLNKG 631
               T + L++    KG
Sbjct: 375 PSTVTLNTLIKGLCLKG 391


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/567 (25%), Positives = 263/567 (46%), Gaps = 56/567 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y MM+    +      A RV   M   GI      ++ ++    + G++     VL
Sbjct: 323 DEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVL 382

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+   + P+    NT I        + KA      M   G+    LTYN L+KG+C L
Sbjct: 383 QEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSL 442

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---------VRDLMEKMVND 310
           H I DA++L   M  +G +P+++S  T++  L K  + ++          R L + ++  
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITF 502

Query: 311 SNLFHDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           + + +     GR+ EA+EL+++M ++ C PD +TY  + +G+C++G+L  A  ++ +M H
Sbjct: 503 NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEH 562

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+   + +F+ G     +  +  ++ +       +PN +TY  ++ G  +EG L E
Sbjct: 563 LGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHE 622

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN----KGCAVNVVN-- 481
           AC++  EMV  G  P     + L+    +EGK+D A   +Q+ +N     GC+++ +   
Sbjct: 623 ACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEID 682

Query: 482 --------------------FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
                               +  +I G C+ G + +A SL + +   +  PD  TY+++I
Sbjct: 683 KISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLI 742

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--Q 579
              + +G ++EA  L   MLS GL P ++TY ++I+  C+ G++   + L  K+ SK   
Sbjct: 743 HGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGIS 802

Query: 580 KCRTAYNQVIENLC-------SF---------GYLEEAGKILGKVLRTASKADASTCHVL 623
                YN +I+  C       +F         GY+EEA K+L +++      +  T   L
Sbjct: 803 PNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTL 862

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIP 650
           +  Y+  G      K+   M  R L+P
Sbjct: 863 IHGYIKSGNMEEISKLYDEMHIRGLLP 889



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 272/603 (45%), Gaps = 33/603 (5%)

Query: 106 LKPRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           L P  + A LR  + D   AL  F  A      R   + +  +L IL++ +    A+ +L
Sbjct: 68  LTPALLQAALRRVRLDPDAALHLFRLAPS----RPSLVSHAQLLHILARARRFHDARALL 123

Query: 165 RLMARRGIECRPE-------------AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNL 211
             +        P              +F  L+ A++ AG+L +A+ V   M K    P+L
Sbjct: 124 SSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSL 183

Query: 212 LICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
             CN  ++ LV       A     +M++AG+ P+  T   + K YC   R+  A++ ++E
Sbjct: 184 RSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEE 243

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGR 319
           M   G   + V+Y+ VM   C     ++ R ++E +                  +   GR
Sbjct: 244 MEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGR 303

Query: 320 IEEAKELVNQMSQMG-CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           +EEA+ +V +M + G  + D V Y  ++NG+C+ G +D A ++  +M   G   N   Y 
Sbjct: 304 MEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYN 363

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             +NGLC  G+  E ++++   E+    P+  +Y+ ++ G  REG + +A ++ R MV+ 
Sbjct: 364 TMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRN 423

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G   T +  N L++  C    +D A +     L +G A N ++ ++L+ G  + G  E+A
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQA 483

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L+L  +        + +T+ T+I+ L K GR+ EA EL+ +M      P  +TYRT+   
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543

Query: 559 YCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           YC++G++     L+ KM  L        +N  I          +   I  ++       +
Sbjct: 544 YCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPN 603

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
             T   L+  +  +G    A  +   M N  + P++ +C  +      EGK +EA+ ++ 
Sbjct: 604 LVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQ 663

Query: 677 RFV 679
           + V
Sbjct: 664 KLV 666



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 217/500 (43%), Gaps = 89/500 (17%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D   Y  +++   +    + A  + R+M R G+      ++ L+  +     + +A+ 
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +  +M K  VAPN + C+T +  L    K  +AL   +     G+  NV+T+N +I G C
Sbjct: 451 LWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLC 510

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VN 309
            + R+ +A +L+D M    C PD ++Y T+    CK  ++     LM KM        V 
Sbjct: 511 KIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVE 570

Query: 310 DSNLFHDQGRIEEAKELVN----QMSQMGCIPDVVTYTAVVNGFCRVGEL---------- 355
             N F     I +    VN    +MS  G  P++VTY A++ G+C+ G L          
Sbjct: 571 MFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEM 630

Query: 356 -------------------------DQAKKMLQQMYH----HGCKPNT------------ 374
                                    D+A  +LQ++ +     GC  +T            
Sbjct: 631 VNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDT 690

Query: 375 ----------VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
                     V +   + GLC +G+  +A+ +  +   + + P+  TYS ++HG    G 
Sbjct: 691 IADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGS 750

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + EA  +   M+  G  P  +  N LI  LC+ GK+  A     +  +KG + N + + +
Sbjct: 751 IDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNT 810

Query: 485 LIRGFCQKGD----------------LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           LI  +C++G                 +EEA+ LLD M     DP+ +TY T+I    K+G
Sbjct: 811 LIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSG 870

Query: 529 RVEEATELMMKMLSKGLVPT 548
            +EE ++L  +M  +GL+PT
Sbjct: 871 NMEEISKLYDEMHIRGLLPT 890



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 16/163 (9%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R  R+  D   Y  ++   + +     A  +  +M   G+      ++ L+    ++GKL
Sbjct: 727 RNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKL 786

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAI----------------HVLVVGNKLAKALRFLER 236
             A+ + + +Q   ++PN +  NT I                  +V    + +A++ L++
Sbjct: 787 SRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQ 846

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
           M    + PN +TY  LI GY     +++  KL DEM ++G  P
Sbjct: 847 MIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 257/520 (49%), Gaps = 62/520 (11%)

Query: 167 MARRGIECRPE----AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           +ARR  +  PE    +F  L   Y RAG+  +A+ VL  M       NL++CNT +    
Sbjct: 168 LARRVFDAMPERNEFSFGILARGYCRAGRSMDALGVLDSMPTM----NLVVCNTVVAGFC 223

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG----CS 278
              ++ +A R +ERM+  G+ PNV+T+N  I   C   R+ DA ++ ++M  K       
Sbjct: 224 REGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPR 283

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPD 338
           PD+V++  ++   C                       + G ++EA+ LV+ M   G +  
Sbjct: 284 PDQVTFDVMLSGFC-----------------------EAGMVDEARVLVDIMRCGGFLRR 320

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V +Y   ++G  R G + +A+++L++M H G +PN+ +Y   ++GLC  GK+ + R++ +
Sbjct: 321 VESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVED 380

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
             +    TP+ +TY+ ++H    EG  + A  ++ EM +KG  P     N+L+QSL + G
Sbjct: 381 FVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAG 440

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY------------ 506
           ++  A++ ++    KG +++  +   +I G C+   L+ A+ ++D M+            
Sbjct: 441 RITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGY 500

Query: 507 -----------LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
                        +  PD +TY+T++ AL K GR +EA + +++M+ K + P  V Y T 
Sbjct: 501 SFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTF 560

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTA 612
           IH YC+ G+    +K+L  M  K+ C+ +   YN +I         +E  K++ ++    
Sbjct: 561 IHGYCKHGKTSLAVKVLRDM-EKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKG 619

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
              +  T + L++S+  +G+   A  +   M    ++P++
Sbjct: 620 ICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNI 659



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 221/474 (46%), Gaps = 5/474 (1%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y   L  L +  +   A+ +LR MA  G++     ++ ++    + GK  +   V   ++
Sbjct: 324 YNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVK 383

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
              + P+++   + +H        A A R L+ M   G  PN  TYN L++      RI 
Sbjct: 384 SGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRIT 443

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
           +A +L++ M  KG S D  S   ++  LC+  ++    D+++ M N+ +L   +      
Sbjct: 444 EAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFL 503

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
             L +  S   C+PD +TY+ +V+  C+ G  D+AKK L +M      P++V Y  F++G
Sbjct: 504 SLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHG 563

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
            C +GK+  A +++   E++   P+  TY++++ G R +    E   ++ EM  KG  P 
Sbjct: 564 YCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPN 623

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            +  N LI+S C  G ++ A   + E L      N+ +F  LI+ FC+  D   A  + D
Sbjct: 624 VMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFD 683

Query: 504 -DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
             +  C +    V Y+ +   LS  GR  EA  ++  +L   +      Y+ +I   C+V
Sbjct: 684 ASLSTCGQ--KEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKV 741

Query: 563 GRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
             V+   +LL+ ++ K       A+  VI+ L   G  +    +  K++  A +
Sbjct: 742 DEVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSERGKKQHVDMLSQKMMEMAER 795



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 213/469 (45%), Gaps = 58/469 (12%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ----KAAVAPNLLICN 215
           A+R++  M   G+      F+  + A  +AG++ +A  + + MQ    +    P+ +  +
Sbjct: 231 AERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFD 290

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             +        + +A   ++ M+  G    V +YN  + G      + +A +L+ EM  +
Sbjct: 291 VMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHE 350

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
           G  P+  +Y  ++  LCKE +  +VR + E  V    +                      
Sbjct: 351 GVQPNSYTYNIIVDGLCKEGKAFDVRKV-EDFVKSGVM---------------------- 387

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PDVVTYT++++ +C  G    A ++L +M   GC PN+ +Y   L  L   G+  EA  
Sbjct: 388 TPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAER 447

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF--------------- 440
           ++    E+ ++ +  + ++++ GL R  KL  A D+V  M  +G                
Sbjct: 448 LLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLT 507

Query: 441 --------FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
                    P  +  + L+ +LC+EG+ D AKK + E + K  + + V + + I G+C+ 
Sbjct: 508 DSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKH 567

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G    A+ +L DM      P T TY  +I    +    +E  +L+ +M  KG+ P V+TY
Sbjct: 568 GKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTY 627

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEA 601
            ++I  +C+ G V   + LL++ML         N+++ N+ SF  L +A
Sbjct: 628 NSLIKSFCERGMVNKAMPLLDEMLQ--------NEIVPNITSFELLIKA 668



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 178/383 (46%), Gaps = 37/383 (9%)

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
           L+G  P+V T N L++  C   R++ A ++ D MP +    ++ S+  +    C+     
Sbjct: 143 LSGAAPDVFTRNILLQALCAAGRMELARRVFDAMPER----NEFSFGILARGYCR----- 193

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                              GR  +A  +++ M  M    ++V    VV GFCR G++D+A
Sbjct: 194 ------------------AGRSMDALGVLDSMPTM----NLVVCNTVVAGFCREGQVDEA 231

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT----PNAITYSV 414
           ++++++M   G  PN V++ A ++ LC  G+ L+A  + N  +E+W      P+ +T+ V
Sbjct: 232 ERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDV 291

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ G    G + EA  +V  M   GF       N  +  L R G +  A++ ++E  ++G
Sbjct: 292 MLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEG 351

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              N   +  ++ G C++G   +   + D +      PD VTYT+++ A    G    A 
Sbjct: 352 VQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAAN 411

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENL 592
            ++ +M  KG  P   TY  ++    + GR+ +  +LLE+M  K       + N +I+ L
Sbjct: 412 RILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGL 471

Query: 593 CSFGYLEEAGKILGKVLRTASKA 615
           C    L+ A  I+  +    S A
Sbjct: 472 CRNNKLDMAMDIVDGMWNEGSLA 494


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 248/512 (48%), Gaps = 13/512 (2%)

Query: 177  EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
            + F++L+ + ++ G       +   +    + P+L   N  IH       +         
Sbjct: 947  DTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGG 1006

Query: 237  MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
                G  P+ +T   L+KG    + I DA++L DEM  KG   D  +Y  ++  LCK ++
Sbjct: 1007 FLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARK 1066

Query: 297  IKEVRDLMEKMVND--SNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
                  L EKM  +   ++F            G   EA ++ ++M   G +PDVV Y+++
Sbjct: 1067 TGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126

Query: 346  VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
            ++G CR G L +A +  ++M   G   +  +Y + ++GL   G   E    +N   +  +
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186

Query: 406  TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            +P+A T+++++ GL +EGK+ EA  ++  M  KG  P  +  N L+  LC  G+++ A K
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATK 1246

Query: 466  FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
              +   ++G  +NV ++  LI G+C+   ++EA    ++M      P TVTY T+I AL 
Sbjct: 1247 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALC 1306

Query: 526  KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE--KMLSKQKCRT 583
            ++GRV  A +L ++M + G    + TY  ++   C+ G +E+ + L +  K    +    
Sbjct: 1307 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIE 1366

Query: 584  AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
             ++ +++ +C  G LEEA K   ++ +   + D    ++L+    NKG+   A K+  +M
Sbjct: 1367 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQM 1426

Query: 644  FNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
              +  +PD      + + L+ E +  EA  L+
Sbjct: 1427 EEKGCLPDSITFNVIIQNLLKENEIHEAIQLL 1458



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 204/424 (48%), Gaps = 27/424 (6%)

Query: 156  LCQGAKR--VLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNL 211
            LC+  K    ++L  +    C+ + F+Y M+  A  + G    A+ + S M  A + P++
Sbjct: 1061 LCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDV 1120

Query: 212  LICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
            ++ ++ +  L    +L +AL F + M+  GI+ +V TYN LI G       K+    ++ 
Sbjct: 1121 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL 1180

Query: 272  MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMS 331
            M  +G SPD  ++  ++  LCKE                       G++ EA++++  M 
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKE-----------------------GKVGEAQQILELMR 1217

Query: 332  QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
              G  PD++TY  ++NG C VG+L+ A K+ + +   G K N  SY   +NG C + K  
Sbjct: 1218 HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID 1277

Query: 392  EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
            EA         +   P+ +TY+ ++  L + G++  A  +  EM   G F       +L+
Sbjct: 1278 EAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLL 1337

Query: 452  QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
              LC+ G ++ A    Q         N+  F+ L+ G C+ G LEEA    D++     +
Sbjct: 1338 DGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 1397

Query: 512  PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
            PDT+ Y  +I+ L   G + EA +L+ +M  KG +P  +T+  +I    +   + + ++L
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 1457

Query: 572  LEKM 575
            LE+M
Sbjct: 1458 LEEM 1461



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 197/429 (45%), Gaps = 14/429 (3%)

Query: 138  RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
            + D   Y M+++ L K  +   A  +   M   GI      +S LM    R G+L+ A+ 
Sbjct: 1082 KGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE 1141

Query: 198  VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
                M+   ++ ++   N+ IH L       +   FL  M   G +P+  T+  LI G C
Sbjct: 1142 FFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLC 1201

Query: 258  DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLF 314
               ++ +A ++++ M  KG  PD ++Y T+M  LC   ++++   L E + +     N+F
Sbjct: 1202 KEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF 1261

Query: 315  H----------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                       DQ +I+EA     +M   G  P  VTY  ++   C+ G +  A+K+  +
Sbjct: 1262 SYNILINGYCKDQ-KIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 1320

Query: 365  MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
            M   G      +Y   L+GLC NG   EA ++  + ++    PN   +S+++ G+ R GK
Sbjct: 1321 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 1380

Query: 425  LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
            L EA     E+ K G  P  +  N+LI  LC +G +  A K + +   KGC  + + F  
Sbjct: 1381 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 1440

Query: 485  LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
            +I+   ++ ++ EA+ LL++M      PD    + ++   S + +   A   +   L KG
Sbjct: 1441 IIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 1500

Query: 545  LVPTVVTYR 553
            +    V  R
Sbjct: 1501 VGSVPVKRR 1509


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 148/567 (26%), Positives = 260/567 (45%), Gaps = 20/567 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
           + + Y ++L+ L    + Q A  +L++MA++G  C P+  A+S ++  +   G+   A  
Sbjct: 227 NAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACS 286

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  V P+++  N  I  L     + KA   L +M   G  P+ +TY+C+I GY 
Sbjct: 287 LFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYA 346

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN----- 312
            L R+K+A K+  EM  +G  P+ V+  + +  LCK  R KE  +  + M    +     
Sbjct: 347 TLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIF 406

Query: 313 ----LFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
               L H    +G   +   L N M   G   +   +T +++ + + G +D A  +  +M
Sbjct: 407 SYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM 466

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  P+ V+Y+  ++     G+  +A E  N        PN   YS ++ G    G L
Sbjct: 467 QQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGL 526

Query: 426 SEACDVVREMVKKGFFPTP--VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
            +A ++V EM+ KG  P P  V  + +I SLC++G++  A        + G    V+ F 
Sbjct: 527 VKAKELVSEMINKG-IPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFN 585

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           SLI G+C  G +++A  +LD M +   +PD VTY T++D   KNGR+ +   L  +M  K
Sbjct: 586 SLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRK 645

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEA 601
           G+ P  VTY  ++    + GR     K   +M+      T   Y  ++  LC     +EA
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEA 705

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
             +  K+     K   +  + ++ +         A ++   +    L+P+      +   
Sbjct: 706 IILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIIN 765

Query: 662 LILEGKSEEADTLMLRFVERGHIQPKS 688
           L+ +G  E+A+  M   +E+  I P S
Sbjct: 766 LLKDGGVEDANN-MFSSMEKSGIVPGS 791



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/551 (23%), Positives = 255/551 (46%), Gaps = 27/551 (4%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A   F+   RQ   + D + Y ++++ L K +    A+ VLR M   G +     +S ++
Sbjct: 284 ACSLFHEMTRQG-VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMI 342

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             Y+  G+L+ A  +   M+K  + PN++ CN+ +  L    +  +A  F + M   G  
Sbjct: 343 HGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHK 402

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P++ +Y  L+ GY       D I L + M   G + +    +T++               
Sbjct: 403 PDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAAN-CHVFTIL--------------- 446

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   + +  +G +++A  +  +M Q G  PDVVTY+ V++ F R+G L  A +   
Sbjct: 447 -------IHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFN 499

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT-PNAITYSVVMHGLRRE 422
           QM   G +PNT  Y++ + G C +G  ++A+E+++    +    P+ + +S V++ L ++
Sbjct: 500 QMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKD 559

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G++ +A D+       G  P  +  N LI   C  GKMD A K +      G   ++V +
Sbjct: 560 GRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTY 619

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            +L+ G+ + G + + L+L  +M      P+TVTY  ++  L + GR   A +   +M+ 
Sbjct: 620 NTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIE 679

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEE 600
            G   TV  Y  ++   C+    ++ + L +K+  ++ +   T  N +I  +      EE
Sbjct: 680 SGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEE 739

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           A ++   +  +    + ST  V++ + L  G    A  +   M    ++P  +L  ++  
Sbjct: 740 AKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIR 799

Query: 661 RLILEGKSEEA 671
            L+ +G+  +A
Sbjct: 800 MLLEKGEIAKA 810



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 225/483 (46%), Gaps = 30/483 (6%)

Query: 212 LICNTAIHVLVVGNKLAKALR-FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           +  NT +  L   N+  +A+   L RM   G  PN ++Y+ ++K  CD    + A+ L+ 
Sbjct: 193 ITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQ 252

Query: 271 EMPLKG--CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVN 328
            M  +G  CSPD V+Y TV+                       + F ++G   +A  L +
Sbjct: 253 MMAKQGGACSPDVVAYSTVI-----------------------HGFFNEGETGKACSLFH 289

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +M++ G  PDVVTY  +++  C+   +D+A+ +L+QM   G +P+TV+Y+  ++G    G
Sbjct: 290 EMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLG 349

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EA +M    ++    PN +T +  +  L + G+  EA +    M  KG  P      
Sbjct: 350 RLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYC 409

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            L+     EG             + G A N   FT LI  + ++G +++A+ +  +M   
Sbjct: 410 TLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQ 469

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD VTY+T+I   S+ GR+ +A E   +M+++G+ P    Y ++I  +C  G +   
Sbjct: 470 GVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKA 529

Query: 569 LKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            +L+ +M++K   R     ++ VI +LC  G + +A  I         +    T + L++
Sbjct: 530 KELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLID 589

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ 685
            Y   G    A+K+   M    + PD+     + +     G+  +  TL  R ++R  ++
Sbjct: 590 GYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTL-FREMQRKGVK 648

Query: 686 PKS 688
           P +
Sbjct: 649 PNT 651



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 170/392 (43%), Gaps = 42/392 (10%)

Query: 336 IPDVVTYTAVVNGFCRVG-----------------ELDQAKK------------------ 360
           +P   TY  +++  CR                   ++DQ                     
Sbjct: 154 VPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVN 213

Query: 361 -MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW--TPNAITYSVVMH 417
            +L +M   GC PN VSY+  L  LC N  S  A +++    ++    +P+ + YS V+H
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G   EG+  +AC +  EM ++G  P  V  NL+I +LC+   MD A+  +++    G   
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQP 333

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           + V ++ +I G+   G L+EA  +  +M      P+ VT  + + +L K+GR +EA E  
Sbjct: 334 DTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFF 393

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK---QKCRTAYNQVIENLCS 594
             M +KG  P + +Y T++H Y   G   D++ L   M S      C   +  +I     
Sbjct: 394 DSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHV-FTILIHAYAK 452

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            G +++A  I  ++ +     D  T   ++ ++   G    A +   +M  R + P+  +
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAV 512

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
              + +   + G   +A  L+   + +G  +P
Sbjct: 513 YSSIIQGFCMHGGLVKAKELVSEMINKGIPRP 544



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 170/387 (43%), Gaps = 13/387 (3%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +Q     D + Y  ++   S+      A      M  RGI+     +S ++  +   G L
Sbjct: 467 QQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGL 526

Query: 193 RNAMYVLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
             A  ++S M+ K    P+++  ++ I+ L    ++  A    +     G  P V+T+N 
Sbjct: 527 VKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNS 586

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE----VRDLMEKM 307
           LI GYC + ++  A K++D M + G  PD V+Y T++    K  RI +     R++  K 
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKG 646

Query: 308 VNDSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
           V  + + +          GR   A++  ++M + G    V  Y  ++ G CR    D+A 
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI 706

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            + Q++     K +       +N +    +  EA+E+  T       PN  TY V++  L
Sbjct: 707 ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINL 766

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            ++G + +A ++   M K G  P    +N +I+ L  +G++  A  ++ +   K   +  
Sbjct: 767 LKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEA 826

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMY 506
              + ++  F +KG  +E + LL   Y
Sbjct: 827 STTSLMLSLFSRKGKYQEDIKLLPAKY 853


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 253/529 (47%), Gaps = 19/529 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y ++++   K K  + AK +   M   G+   P  F+Y  L+  + + G +  A+ 
Sbjct: 310 DGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGL--NPNRFTYTALIDGFIKEGNIEEALR 367

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M    +  N++  N  I  +    ++AKA+     M +AGI P+  TYN LI GY 
Sbjct: 368 IKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYL 427

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLF 314
             H +  A +L+ EM  +  +P   +Y  ++  LC    +++  +++++M+ +    N+F
Sbjct: 428 KSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVF 487

Query: 315 H---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                      + R E A EL+  M   G +PD+  Y  ++ G CR  ++++AK +L  M
Sbjct: 488 MYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM 547

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G KPN  +Y AF+N    +G+   A             PN + Y++++ G    G  
Sbjct: 548 GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNT 607

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA    + M++KG  P     + +I SL + GK   A     + L  G   +V  + SL
Sbjct: 608 VEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID--ALSKNGRVEEATELMMKMLSK 543
           I GFC++GD+E+A  L D+M     +P+ V Y T+I+     K+G + EA +L  +M+SK
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISK 727

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ-KCRTAYNQVIENLCSFGYLEEAG 602
           G+ P    Y  +I    + G +E  L L  +   K     +A+N +I++ C  G + EA 
Sbjct: 728 GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEAR 787

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           ++   ++      +  T  +L+++Y    +   A ++   M  RN+IP+
Sbjct: 788 ELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPN 836



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 167/646 (25%), Positives = 280/646 (43%), Gaps = 46/646 (7%)

Query: 78  VREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVL-RSQADERVALQ-FFYWADRQW 135
           VRE   +++ R  W   L  E  + +R L P  +C+VL +S+ D+ V LQ FF+W+  + 
Sbjct: 58  VREFSMILK-RKDWQILLNNE--DNVRKLNPEIVCSVLQKSEIDDSVRLQNFFHWSSSKM 114

Query: 136 ---RYRHDPIVYYMMLEI-LSKTKLCQGAKRVL-RLMARRG---------IECRPE---- 177
              +Y H     Y +L I L  + L   A  +L +L+  R          + C  E    
Sbjct: 115 STPQYLHS----YSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGS 170

Query: 178 ---AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
               F   +  +   G L  A  V          P L+ CN  +  L+  N +    +  
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
             M  A I P+V TY  +IK +C +  +     ++ EM  K C P+  +Y   +G LC+ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQT 289

Query: 295 KRIKEVRD----LMEKMVNDS--------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
             + E  +    +MEK +           + F  Q R +EAK +   M   G  P+  TY
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           TA+++GF + G +++A ++  +M   G K N V+Y A + G+   G+  +A  + N    
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               P+  TY++++ G  +   +++AC+++ EM  +   P+P   ++LI  LC    +  
Sbjct: 410 AGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A + + + +  G   NV  + +LI+ + Q+   E A+ LL  M      PD   Y  +I 
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLII 529

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC- 581
            L +  +VEEA  L++ M  KG+ P   TY   I+ Y + G ++   +  + MLS     
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589

Query: 582 -RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               Y  +I+  C  G   EA      +L      D      ++ S    G    A  V 
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
            +     ++PD+ L   +      EG  E+A  L    +  G I P
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG-INP 694



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/518 (26%), Positives = 238/518 (45%), Gaps = 22/518 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++   K+     A  +L  M  R +   P  +S L+     +  L+ A  VL
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVL 474

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  V PN+ +  T I   V  ++   A+  L+ M   G+ P++  YNCLI G C  
Sbjct: 475 DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRA 534

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI----KEVRDLMEKMVNDSNLFH 315
            ++++A  L+ +M  KG  P+  +Y   +    K   I    +  +D++   +  +N+ +
Sbjct: 535 KKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIY 594

Query: 316 --------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                   D G   EA      M + G IPD+  Y+A+++   + G+  +A  +  +   
Sbjct: 595 TILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLK 654

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM--HGLRREGKL 425
            G  P+   Y + ++G C  G   +A ++ +        PN + Y+ ++  +G  + G L
Sbjct: 655 TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNL 714

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
           +EA  +  EM+ KG  P      +LI    +EG ++ A     E   K    ++  F SL
Sbjct: 715 TEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSL 773

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I  FC+ G + EA  L DDM   K  P+ VTYT +IDA  K   +EEA +L + M ++ +
Sbjct: 774 IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 833

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ-KCRT-AYNQVIENLCSFGYLEEAGK 603
           +P  +TY +++  Y Q+G    ++ L + M ++   C   AY  +    C  G   EA K
Sbjct: 834 IPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALK 893

Query: 604 ILGKVLRTASKA-----DASTCHVLVESYLNKGIPLLA 636
           +L K L    K      DA   H+  E  ++  + LL+
Sbjct: 894 LLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLS 931



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 194/424 (45%), Gaps = 17/424 (4%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y   + + SK+   Q A+R  + M   GI      ++ L+  +   G    A+     M
Sbjct: 558 TYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCM 617

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            +  + P++   +  IH L    K  +A+    +    G+ P+V  YN LI G+C    I
Sbjct: 618 LEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDI 677

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVM---GYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
           + A +L DEM   G +P+ V Y T++   GY CK   + E   L ++M++     D  ++
Sbjct: 678 EKASQLYDEMLHNGINPNIVVYNTLINDYGY-CKSGNLTEAFKLFDEMISKGISPDGYIY 736

Query: 315 -------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +G +E+A  L ++ +Q   +  +  + ++++ FC+ G++ +A+++   M  
Sbjct: 737 CILIDGCGKEGNLEKALSLFHE-AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVD 795

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
               PN V+YT  ++         EA ++    E     PN +TY+ ++    + G   +
Sbjct: 796 KKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFK 855

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
              + ++M  +G     +   ++  + C+EGK   A K + + L +G  +    F +LI 
Sbjct: 856 MISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIF 915

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
             C++  +   L LL +M   +    + T  T++    K+G  +EA++++  M   G VP
Sbjct: 916 HLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 975

Query: 548 TVVT 551
           T ++
Sbjct: 976 TSLS 979



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 173/375 (46%), Gaps = 13/375 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A    + M  +G+     A+S ++ + S+ GK + AM V     K  V P++ + N+ I 
Sbjct: 610 ALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLIS 669

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK--GYCDLHRIKDAIKLIDEMPLKGC 277
                  + KA +  + M   GI PN++ YN LI   GYC    + +A KL DEM  KG 
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGI 729

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLM----EKMVNDSNLFHD-------QGRIEEAKEL 326
           SPD   Y  ++    KE  +++   L     +K V   + F+         G++ EA+EL
Sbjct: 730 SPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEAREL 789

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
            + M      P++VTYT +++ + +   +++A+++   M      PNT++YT+ L     
Sbjct: 790 FDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQ 849

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G   +   +    E      +AI Y V+     +EGK  EA  ++ + + +G       
Sbjct: 850 IGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDV 909

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            + LI  LC+E ++    + + E   +  +++     +L+ GF + G+ +EA  +L  M 
Sbjct: 910 FDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQ 969

Query: 507 LCKKDPDTVTYTTII 521
                P +++ T  I
Sbjct: 970 RLGWVPTSLSLTDSI 984


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 145/562 (25%), Positives = 251/562 (44%), Gaps = 32/562 (5%)

Query: 124 ALQFFYWADRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           AL  F   +R  R R  P +  +  +L  +++ K       + + M   GI       + 
Sbjct: 38  ALSLF---NRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+ ++    +L  A  VL  + K    P+     T I  L V  K+ +AL+  ++M   G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             P+VLTY  LI G C +     AI+ +  M  + C P  V Y T++  LCK++++    
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT--- 211

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                               EA  L + M   G  P+  TY+++++G C +G   +A ++
Sbjct: 212 --------------------EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRL 251

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
              M H    P+ +++   ++ LC  G  ++A  +++   +    P+ +TY+ +M G   
Sbjct: 252 FYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCL 311

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
             ++ +  +V   MV+KG  P+ +    LI   C+   MD A    +E   +G   + V 
Sbjct: 312 RSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVT 371

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           + +LI G C  G L +A++L  +M +  + PD VTY  + D L KN R+ EA  L+  + 
Sbjct: 372 YNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIE 431

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK---QKCRTAYNQVIENLCSFGYL 598
              L P +  Y  V+   C+ G +E    L  K+ SK      RT Y  +I  LC  G L
Sbjct: 432 GTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRT-YTIMINGLCQQGLL 490

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
            EA K+ G++       +A T +++   +L     L A ++   M +R    D+     +
Sbjct: 491 AEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLL 550

Query: 659 SERLILEGKSEEADTLMLRFVE 680
            E L  +G  +    ++  FV+
Sbjct: 551 VEMLSDDGLDQSVKQILCEFVQ 572



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 211/457 (46%), Gaps = 25/457 (5%)

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           +  L   ++M   GI  N  T N LI  +C L+R+  A  ++ ++   G  P   ++ T+
Sbjct: 71  STVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTL 130

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +  LC E                       G+I EA +L ++M+  G  PDV+TY  ++N
Sbjct: 131 IRGLCVE-----------------------GKIGEALQLFDKMTGEGFQPDVLTYGTLIN 167

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G C+VG    A + L+ M    C+P  V Y+  ++ LC + +  EA  + +    +  +P
Sbjct: 168 GLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISP 227

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           N  TYS ++HGL   G   EA  +   M+ +   P  +  N L+ +LC+EG +  A   +
Sbjct: 228 NNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVV 287

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
              +      +VV + SL+ G C + ++ + +++ D M      P  ++YTT+I+   K 
Sbjct: 288 DVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKI 347

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAY 585
             +++A  L  +M  +GL+P  VTY T+IH  C VGR+ D + L  +M+   +      Y
Sbjct: 348 QIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTY 407

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
             + + LC    L EA  +L  +  T    D     ++++     G    A  +  ++ +
Sbjct: 408 RILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSS 467

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           + L PD++    +   L  +G   EA  L     E G
Sbjct: 468 KGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENG 504



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 200/450 (44%), Gaps = 80/450 (17%)

Query: 311 SNLFHDQG----RIEEAKELVNQMSQMGCIPDVV-------------------------- 340
           S+ FH +      I++A  L N+M +M   P +V                          
Sbjct: 22  SHAFHSKSLNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMD 81

Query: 341 -------TYT--AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
                  TYT   ++N FC +  L  A  +L  +   G +P+T ++T  + GLC  GK  
Sbjct: 82  SFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIG 141

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           EA ++ +    E + P+ +TY  +++GL + G  S A   +R M ++   PT V  + +I
Sbjct: 142 EALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTII 201

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
            SLC++ ++  A     + L KG + N   ++SLI G C  G  +EA+ L   M   K  
Sbjct: 202 DSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIM 261

Query: 512 PDTVTYTTIIDALSKNGRVEEA---TELMMK----------------------------- 539
           PD +T+ T++DAL K G V +A    ++M++                             
Sbjct: 262 PDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNV 321

Query: 540 ---MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLC 593
              M+ KG VP+V++Y T+I+ YC++  ++  + L E+M S+Q        YN +I  LC
Sbjct: 322 FDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEM-SQQGLIPDTVTYNTLIHGLC 380

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF-NRNLIPDL 652
             G L +A  +  +++      D  T  +L + YL K   L    V  ++    NL PD+
Sbjct: 381 HVGRLRDAIALFHEMVVYGQIPDLVTYRILFD-YLCKNHRLAEAMVLLKVIEGTNLDPDI 439

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +   V + +   G+ E A  L  +   +G
Sbjct: 440 HIYSIVMDGMCRAGELEAARDLFSKLSSKG 469


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 246/522 (47%), Gaps = 67/522 (12%)

Query: 127 FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMV 184
           FF WA  +  ++H+      +LE+       + A RV +         RP+ F+Y  L+ 
Sbjct: 3   FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFK--DELVTLFRPDDFTYGTLIR 60

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
            + +A ++  A+ +L  M+ A + P ++   + I  L   N   KAL+   +M    + P
Sbjct: 61  GFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKP 120

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           +   Y  +I   C ++++  A    + M   GC PDKV+Y  ++  L K           
Sbjct: 121 DAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK----------- 169

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                         + E+  ++  +M   G  P++VTY  VVNG+C+ G +DQA  ++++
Sbjct: 170 ------------ACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRR 217

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           +   G  P+   Y+  ++GLC + +  EARE+   +  +    + I Y+  + GL + GK
Sbjct: 218 LKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGD--VQDVIVYTSFISGLCKAGK 275

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L EA  V  +M++ G  P PV  N++I SLC++ ++  AK+ M + + + C   V   T 
Sbjct: 276 LDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTV 335

Query: 485 LIRGFCQKGDLEEALSLLDDMY------------------LCKKD--------------- 511
           L+ G C+   +EEA  +L+ M                   LCK D               
Sbjct: 336 LVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRA 395

Query: 512 ---PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD VTYT IIDA  K GR++EA EL  +M  +G    VV Y  +I  YC+  +V++ 
Sbjct: 396 GCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEA 455

Query: 569 LKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
           + ++E+M  +  Q    + + +++ LC    +EEA  ++ K+
Sbjct: 456 IAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 199/447 (44%), Gaps = 32/447 (7%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G   N  T N L++ + +    ++A ++  +  +    PD  +Y T++   CK ++I + 
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQ- 70

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                                 A  L+ +M   G  P +VT+ +++   C +   D+A +
Sbjct: 71  ----------------------AVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQ 108

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +  QM     KP+   YT  +  LC   K   A        +    P+ +TY+V++H L 
Sbjct: 109 IFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLF 168

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +  K  +   +  EM+ KG  P  V    ++   C+ G++D A   M+     G + +  
Sbjct: 169 KACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGS 228

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKD-PDTVTYTTIIDALSKNGRVEEATELMMK 539
            +++LI G C+    +EA  L +   +   D  D + YT+ I  L K G+++EA  + +K
Sbjct: 229 LYSTLIDGLCKHDRHDEARELFE---MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVK 285

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY---NQVIENLCSFG 596
           M+  G  P  V+Y  +I+  C+  RV +  +L+++ + + KC         +++ LC   
Sbjct: 286 MIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMER-KCMPGVPVCTVLVDGLCKSR 344

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL-LAYKVACRMFNRNLIPDLKLC 655
            +EEA  IL ++L T  +A +   +  V   L K   L  AY V  +M     +PD+   
Sbjct: 345 RVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTY 404

Query: 656 KKVSERLILEGKSEEADTLMLRFVERG 682
             + +     G+ +EA  L  R  ERG
Sbjct: 405 TAIIDAFCKVGRLDEARELFQRMHERG 431



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 147/350 (42%), Gaps = 35/350 (10%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PD  TY  ++ GFC+  ++ QA  +L +M   G  P  V++ + +  LC    + +A ++
Sbjct: 50  PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI 109

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
            +   +    P+A  Y+VV                                   I  LC+
Sbjct: 110 FHQMIDMKVKPDAFLYTVV-----------------------------------IGHLCK 134

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
             K+D A  + +  +  GC  + V +T L+    +    E+   + ++M      P+ VT
Sbjct: 135 INKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVT 194

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y T+++   K GR+++A  LM ++   G  P+   Y T+I   C+  R ++  +L E   
Sbjct: 195 YATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAA 254

Query: 577 SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
              +    Y   I  LC  G L+EA  +  K++      D  + +V++ S         A
Sbjct: 255 GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEA 314

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
            ++  +   R  +P + +C  + + L    + EEA  ++ R +E G   P
Sbjct: 315 KELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAP 364


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 151/565 (26%), Positives = 254/565 (44%), Gaps = 45/565 (7%)

Query: 88  RSAWSPKLEGELRNLLRSLKPRQIC-AVLRSQADERVALQFFYWADRQWRYRHDPIVYYM 146
           +  WS     EL+  LR  KP      +L +  D  + L+FF W+ +++R  +       
Sbjct: 29  KQHWS-----ELKPHLRVTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLSYGLEPTSK 83

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIEC-------------RPEA----FSYLMVAYSRA 189
           +L  L+ +K     +  L    +                  RP A       L++AY + 
Sbjct: 84  VLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKN 143

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
            +L  A    +  +      +L  CN  +  LV  NK+       + M    I  N+ T+
Sbjct: 144 LELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTF 203

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N  I G C   ++  A   I++M   G SP+ V+Y T++   CK                
Sbjct: 204 NIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKR--------------- 248

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                   G++ +A+  + +M      P+ VT+  +++GFC+   +  AKK  ++M   G
Sbjct: 249 -----GSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQG 303

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            KPN V+Y + +NGLC+NGK  EA ++ +        PN +TY+ +++G  ++  + EA 
Sbjct: 304 LKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEAT 363

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            V  ++ K+   P  +  N +I + C+EG M+         L++G   NV  +  LI G 
Sbjct: 364 KVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGL 423

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+K DL+ A  LL++M       D VTY  +ID L KN +   A +L+ +M + GL P  
Sbjct: 424 CRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNH 483

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLS--KQKCRTAYNQVIENLCSFGYLEEAGKILGK 607
           VTY T++  YC  G+++  L +  +M    KQ     YN +I+  C    LE A  +L +
Sbjct: 484 VTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNE 543

Query: 608 VLRTASKADASTCHVLVESYLNKGI 632
           +L      + +T  ++    L KG 
Sbjct: 544 MLEKGLNPNRTTYDIVRLEMLEKGF 568



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 196/434 (45%), Gaps = 35/434 (8%)

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND-----SNLFH----DQGR------------------ 319
           V+ +L   KR  +VR  ++  V +     S++FH    D GR                  
Sbjct: 84  VLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKN 143

Query: 320 --IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
             +  A E   +    G    + +   +++   +  ++   + + ++M       N  ++
Sbjct: 144 LELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTF 203

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG---KLSEACDVVRE 434
             F+NGLC  GK  +A + I   +    +PN +TY+ ++ G  + G   K+ +A   ++E
Sbjct: 204 NIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKE 263

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M+     P  V  N LI   C++  +  AKK  +E   +G   N+V + SLI G C  G 
Sbjct: 264 MLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGK 323

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           LEEA+ L D M      P+ VTY  +I+   K   ++EAT++   +  + LVP V+T+ T
Sbjct: 324 LEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNT 383

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I  YC+ G +E+   L   ML +      + YN +I  LC    L+ A ++L ++    
Sbjct: 384 MIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
            K D  T ++L++          A K+   MFN  L P+      + +   +EGK + A 
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAAL 503

Query: 673 TLMLRFVERGHIQP 686
            +  R +E+   QP
Sbjct: 504 NVRTR-MEKERKQP 516



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 16/143 (11%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D + Y ++++ L K    + A+++L  M   G++     ++ LM  Y   GKL+ A+ 
Sbjct: 445 KGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN 504

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V + M+K    PN++  N  I      NKL  A   L  M   G+ PN  TY        
Sbjct: 505 VRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY-------- 556

Query: 258 DLHRIKDAIKLIDEMPLKGCSPD 280
                 D ++L  EM  KG SPD
Sbjct: 557 ------DIVRL--EMLEKGFSPD 571


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 151/573 (26%), Positives = 259/573 (45%), Gaps = 81/573 (14%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++   +T     A R+L  M R G++      + L+  Y + G++  A  V+
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M    + P+    NT +         ++A    ++M   GI P VLTYN L+KG C +
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMVNDSNLFH 315
               DA+++   M  +G +PD+V Y T++  L K +  +      +D++ +    S +  
Sbjct: 451 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 316 DQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK------- 360
           +         G++ EA+E+ ++M  +GC PD +TY  +++G+C+   + QA K       
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 361 ----------------------------MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
                                       +L +M   G  PN V+Y A ++G C  G   +
Sbjct: 571 EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT--------- 443
           A        E   + N I  S ++ GL R G++ EA  ++++MV  GFFP          
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 690

Query: 444 ---------------------PVEI--NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
                                P  I  N+ I  LC+ GK+D A++F      KG   +  
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +LI G+   G+++EA  L D+M      P+ VTY  +I+ L K+  V+ A  L  K+
Sbjct: 751 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYL 598
             KGL P VVTY T+I  YC++G ++   KL +KM+ +        Y+ +I  LC  G +
Sbjct: 811 HQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDI 870

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           E + K+L ++++    +       LV+ Y+  G
Sbjct: 871 ERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSG 903



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 161/647 (24%), Positives = 293/647 (45%), Gaps = 45/647 (6%)

Query: 75  HP----LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRS-QADERVALQFFY 129
           HP    LV  +CRL+ LR          +  L        + AVLR+ + +   +L FF 
Sbjct: 37  HPAPPELVSRICRLVLLRRC------NAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQ 90

Query: 130 WADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLM-------------------ARR 170
           +  +Q  +R +   Y  ++ ILS+ ++    +  L  +                     R
Sbjct: 91  FVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYR 150

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
                P  F  ++  Y   G  +NA+YV   M K    P+L  CN+ ++ LV   +   A
Sbjct: 151 EFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTA 210

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-G 289
               ++M   GI P+V   + ++  +C   ++ +A   + +M   G  P+ V+Y++++ G
Sbjct: 211 HYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING 270

Query: 290 Y--LCKEKRIKEVRDLMEKMVNDSNL---------FHDQGRIEEAKELVNQMS-QMGCIP 337
           Y  L   +  K V   M +     N+         +  Q +++EA++++  M  +   +P
Sbjct: 271 YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVP 330

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D   Y  +++G+CR G++D A ++L +M   G K N     + +NG C  G+  EA  +I
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
               +    P++ +Y+ ++ G  REG  SEA ++  +M+++G  PT +  N L++ LCR 
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G  D A +     + +G A + V +++L+ G  +  + E A +L  D+         +T+
Sbjct: 451 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
            T+I  L K G++ EA E+  KM   G  P  +TYRT+I  YC+   V    K+   M  
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 578 KQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
           +    +   YN +I  L     L E   +L ++       +  T   L++ +  +G+   
Sbjct: 571 EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           A+     M    L  ++ +C  +   L   G+ +EA+ LM + V+ G
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG 677



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 234/521 (44%), Gaps = 81/521 (15%)

Query: 135 WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
           W  + D   Y  +L+   +      A  +   M + GIE     ++ L+    R G   +
Sbjct: 396 WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDD 455

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +  +M K  VAP+ +  +T +  L        A    + +   G T + +T+N +I 
Sbjct: 456 ALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 515

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEK----- 306
           G C + ++ +A ++ D+M   GCSPD ++Y T++   CK   + +   V+  ME+     
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP 575

Query: 307 ---MVND--SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC----------- 350
              M N   S LF  + R+ E  +L+ +M   G  P++VTY A+++G+C           
Sbjct: 576 SIEMYNSLISGLFKSR-RLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 634

Query: 351 ------------------------RVGELDQAKKMLQQMYHHG----------------- 369
                                   R+G +D+A  ++Q+M  HG                 
Sbjct: 635 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 694

Query: 370 -----------CK----PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
                      CK    PN + Y   + GLC  GK  +AR   +    + + P+  TY  
Sbjct: 695 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 754

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++HG    G + EA  +  EM+++G  P  V  N LI  LC+   +D A++   +   KG
Sbjct: 755 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 814

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              NVV + +LI G+C+ G+++ A  L D M      P  VTY+ +I+ L K+G +E + 
Sbjct: 815 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSM 874

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           +L+ +M+  G+   ++ Y T++  Y + G ++ + KL + M
Sbjct: 875 KLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 206/439 (46%), Gaps = 16/439 (3%)

Query: 130 WADRQWR-YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAY 186
           W D   R +    I +  M+  L K      A+ +   M   G  C P+  +Y  L+  Y
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG--CSPDGITYRTLIDGY 552

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
            +A  +  A  V   M++  ++P++ + N+ I  L    +L +    L  M + G+TPN+
Sbjct: 553 CKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNI 612

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           +TY  LI G+C    +  A     EM   G S + +   T++  L +  RI E   LM+K
Sbjct: 613 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 672

Query: 307 MVNDSNLFHDQ----------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
           MV D   F D             I++  + +++  +   +P+ + Y   + G C+ G++D
Sbjct: 673 MV-DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVD 731

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
            A++    +   G  P+  +Y   ++G    G   EA  + +        PN +TY+ ++
Sbjct: 732 DARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALI 791

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
           +GL +   +  A  +  ++ +KG FP  V  N LI   C+ G MD A K   + + +G +
Sbjct: 792 NGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGIS 851

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            +VV +++LI G C+ GD+E ++ LL+ M     D   + Y T++    ++G +++  +L
Sbjct: 852 PSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKL 911

Query: 537 MMKMLSKGLVPTVVTYRTV 555
              M  + L  T ++++ V
Sbjct: 912 YDMMHIRCLSTTAISHKQV 930



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 248/541 (45%), Gaps = 43/541 (7%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQK-AAVAPNLLICNT 216
           + AK VL+ M+ +G+      ++ L+  Y +  K+  A  VL  MQ+ AA+ P+      
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPD----ER 333

Query: 217 AIHVLVVG----NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
           A  VL+ G     K+  A+R L+ M   G+  N+   N LI GYC    I +A  +I  M
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 393

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND----SNLFHDQ--------GRI 320
                 PD  SY T++   C+E    E  +L +KM+ +    + L ++         G  
Sbjct: 394 VDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 453

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           ++A ++ + M + G  PD V Y+ +++G  ++   + A  + + +   G   + +++   
Sbjct: 454 DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTM 513

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++GLC  GK +EA E+ +  ++   +P+ ITY  ++ G  +   + +A  V   M ++  
Sbjct: 514 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPI 573

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P+    N LI  L +  ++      + E   +G   N+V + +LI G+C++G L++A S
Sbjct: 574 SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 633

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
              +M       + +  +T++  L + GR++EA  LM KM+  G  P    +     RY 
Sbjct: 634 SYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYA 693

Query: 561 QVGRVEDLLKLLEKMLSKQKCRT-------AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
            + ++ D L         + C+T        YN  I  LC  G +++A +    +     
Sbjct: 694 AIQKIADSL--------DESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGF 745

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG--KSEEA 671
             D  T   L+  Y   G    A+++   M  R L+P++     V+   ++ G  KSE  
Sbjct: 746 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI-----VTYNALINGLCKSENV 800

Query: 672 D 672
           D
Sbjct: 801 D 801


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/546 (25%), Positives = 239/546 (43%), Gaps = 65/546 (11%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R+ I C   +F+ L+  +    KL  A+     + K    P+++  +T +H L V ++
Sbjct: 103 MERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDR 162

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++AL    +M      PNV+T+  L+ G C   R+ +A+ L+D M   G  P++++Y T
Sbjct: 163 VSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 218

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQM 333
           ++  +CK        +L+ KM   S++                 GR  +A  L  +M + 
Sbjct: 219 IVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEK 278

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  PD+ TY  +++GFC  G   +A+++LQ+M      PN V+Y+A +N      K  EA
Sbjct: 279 GIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEA 338

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            E+ +        PN ITY+ ++ G  ++ +L  A  +   M  KG  P     N LI  
Sbjct: 339 EELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDG 398

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C   ++D   + + E    G   +   + +LI GFC  GDL  AL L   M      PD
Sbjct: 399 YCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 458

Query: 514 TVTYTTIIDALSKNGRVE------------------------------------------ 531
            VT  T++D L  NG+++                                          
Sbjct: 459 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINE 518

Query: 532 ----EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAY 585
               EA EL  +M  +G+VP  +TY ++I+  C+  R+++  ++ + M SK        +
Sbjct: 519 GKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTF 578

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           N ++   C  G +++  ++  ++ R    ADA T   L+  +   G    A  +   M +
Sbjct: 579 NTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMIS 638

Query: 646 RNLIPD 651
             + PD
Sbjct: 639 SGVYPD 644



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 249/482 (51%), Gaps = 22/482 (4%)

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           L +A+ + S M ++   P+++  N  + V+V   +    +   ++M+   I  +V ++N 
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---- 307
           LIK +C   ++  A+    ++   G  PD V++ T++  LC E R+ E  DL  +M    
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPN 177

Query: 308 -VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            V  + L +    +GR+ EA  L+++M + G  P+ +TY  +V+G C++G+   A  +L+
Sbjct: 178 VVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLR 237

Query: 364 QMYHHG-CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           +M      KPN V Y+A ++GL  +G+  +A  +    +E+   P+  TY+ ++ G    
Sbjct: 238 KMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSS 297

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G+ SEA  +++EM+++   P  V  + LI +  +E K   A++   E L +G   N + +
Sbjct: 298 GRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITY 357

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            S+I GFC++  L+ A  +   M      PD  T+ T+ID      R+++ TEL+ +M  
Sbjct: 358 NSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTE 417

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEE 600
            GLV    TY T+IH +C VG +   L L ++M+S   C      N +++ LC  G L++
Sbjct: 418 TGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 477

Query: 601 AGKILGKVLRTASKADAS-----------TCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           A ++   + ++    DAS           T ++L+   +N+G  L A ++   M +R ++
Sbjct: 478 ALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIV 537

Query: 650 PD 651
           P+
Sbjct: 538 PN 539



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 218/451 (48%), Gaps = 38/451 (8%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            D   AL      +     + + ++Y  +++ L K      A  +   M  +GI   P+ 
Sbjct: 227 GDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGI--FPDL 284

Query: 179 FSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           F+Y  ++  +  +G+   A  +L  M +  + PN++  +  I+  V   K  +A    + 
Sbjct: 285 FTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDE 344

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M   GI PN +TYN +I G+C  +R+  A  +   M  KGCSPD  ++ T++   C  KR
Sbjct: 345 MLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKR 404

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
           I                       ++  EL+++M++ G + D  TY  +++GFC VG+L+
Sbjct: 405 I-----------------------DDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLN 441

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE-----------WW 405
            A  + QQM   G  P+ V+    L+GLC NGK  +A EM    ++              
Sbjct: 442 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGV 501

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+  TY++++ GL  EGK  EA ++ +EM  +G  P  +  + +I  LC++ ++D A +
Sbjct: 502 EPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQ 561

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
                 +K  + +VV F +L+ G+C+ G +++ L L  +M       D +TY T+I    
Sbjct: 562 MFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFR 621

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           K G +  A ++  +M+S G+ P  +T R+++
Sbjct: 622 KVGNINGALDIFQEMISSGVYPDTITIRSML 652



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 228/499 (45%), Gaps = 68/499 (13%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---- 307
           L  G+ ++  ++DAI L  +M      P  + +  +MG + + +R   V  L +KM    
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 308 ----------------------------------------VNDSNLFHD---QGRIEEAK 324
                                                   V  S L H    + R+ EA 
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +L +QM    C P+VVT+T ++NG CR G + +A  +L +M   G +PN ++Y   ++G+
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 385 CHNGKSLEAREMINTSEE-EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           C  G ++ A  ++   EE     PN + YS ++ GL ++G+ S+A ++  EM +KG FP 
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPD 283

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
               N +I   C  G+   A++ +QE L +    NVV +++LI  + ++    EA  L D
Sbjct: 284 LFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYD 343

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M      P+T+TY ++ID   K  R++ A  +   M +KG  P V T+ T+I  YC   
Sbjct: 344 EMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAK 403

Query: 564 RVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           R++D  +LL +M         T YN +I   C  G L  A  +  +++ +    D  TC+
Sbjct: 404 RIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 463

Query: 622 VLVESYLNKGI---PLLAYKV---------ACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
            L++   + G     L  +K          A R FN  + PD++    +   LI EGK  
Sbjct: 464 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFN-GVEPDVQTYNILISGLINEGKFL 522

Query: 670 EADTLMLRFVERGHIQPKS 688
           EA+ L      RG I P +
Sbjct: 523 EAEELYKEMPHRG-IVPNT 540



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 187/391 (47%), Gaps = 23/391 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  M++    +     A+R+L+ M  R I      +S L+ AY +  K   A  + 
Sbjct: 283 DLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELY 342

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    + PN +  N+ I      N+L  A      M   G +P+V T+N LI GYC  
Sbjct: 343 DEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGA 402

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            RI D  +L+ EM   G   D  +Y T++   C    +    DL ++M++          
Sbjct: 403 KRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 462

Query: 312 ----NLFHDQGRIEEAKELVNQM--SQM---------GCIPDVVTYTAVVNGFCRVGELD 356
               +   D G++++A E+   M  S+M         G  PDV TY  +++G    G+  
Sbjct: 463 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFL 522

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A+++ ++M H G  PNT++Y++ +NGLC   +  EA +M ++   + ++P+ +T++ ++
Sbjct: 523 EAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLV 582

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            G  + G++ +  ++  EM ++G     +    LI    + G ++GA    QE ++ G  
Sbjct: 583 SGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVY 642

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            + +   S++     K +L+ A+++L+D+ +
Sbjct: 643 PDTITIRSMLTVLWSKEELKRAVAMLEDLQM 673


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 254/531 (47%), Gaps = 38/531 (7%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIV--YYMMLEILSKTKLCQGA 160
           + S K R    ++  + D+ VAL          R R  P V  +  +  +L++TK     
Sbjct: 55  MSSYKERLRSGLVDIKKDDAVAL-----FQSMLRSRPLPTVIDFNRLFGLLARTKQYDLV 109

Query: 161 KRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
             + + M  +GI       + ++  + R  KL  A   +  + K    PN +  NT ++ 
Sbjct: 110 LALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNG 169

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
           L +  ++ +A+  ++ M L+   P+++T N ++ G C   R+ +A+ LI  M   GC P+
Sbjct: 170 LCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPN 229

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
           + +Y  ++  +CK        DL+ KM        +  +I+               P VV
Sbjct: 230 QFTYGPILNRMCKSGNTASALDLLRKM--------EHRKIK---------------PHVV 266

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TYT +++  C+ G LD A     +M   G K N  +Y + +   C  G+  +  +++   
Sbjct: 267 TYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDM 326

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
                TPN +T+S ++  L +EGKL+EA D+  EM+ +G  P  +  N LI  LC + ++
Sbjct: 327 ITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRL 386

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D A + M   ++KGC  ++  +  LI GFC+   +++ + L   M L     DTVTY+T+
Sbjct: 387 DEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTL 446

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           I    ++ ++  A ++  +M+S+G+ P ++TY  ++   C  G +E+ L +L++M    K
Sbjct: 447 IQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM---HK 503

Query: 581 CRT-----AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           C+       YN +I  +C+   +++A  +   +     K D  + ++++  
Sbjct: 504 CKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSG 554



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 237/507 (46%), Gaps = 25/507 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L    +R  +    + +   M+   +A +L   N  I+      KL  A   + ++ 
Sbjct: 93  FNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIF 152

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  PN +T+N L+ G C   R+ +A++L+D M L    PD ++  T++  LC      
Sbjct: 153 KLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLC------ 206

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
            ++D                R+ EA +L+ +M   GC P+  TY  ++N  C+ G    A
Sbjct: 207 -LKD----------------RVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASA 249

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L++M H   KP+ V+YT  ++ LC +G+  +A    +  E +    N  TY+ ++  
Sbjct: 250 LDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGS 309

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
               G+  +   ++R+M+ +   P  V  + LI SL +EGK+  AK    E + +G   N
Sbjct: 310 FCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPN 369

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            + + SLI G C    L+EA  ++D M     DPD  TY  +I+   K  +V++   L  
Sbjct: 370 TITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFR 429

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
           KM  +G++   VTY T+I  +CQ  ++    K+ ++M+S+        Y  +++ LC  G
Sbjct: 430 KMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNG 489

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            LEEA  IL ++ +   + D    ++++    N      A+ + C + ++ +  D++   
Sbjct: 490 ELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYN 549

Query: 657 KVSERLILEGKSEEADTLMLRFVERGH 683
            +   L       EAD L  +  E G+
Sbjct: 550 IMLSGLCKRSSLSEADALFRKMKEDGY 576



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 186/401 (46%), Gaps = 27/401 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y ++++ L K      A      M  +GI+     ++ L+ ++   G+  +   +L  
Sbjct: 266 VTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRD 325

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + PN++  +  I  LV   KL +A      M   GI PN +TYN LI G C+  R
Sbjct: 326 MITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKR 385

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A +++D M  KGC PD  +Y  ++   CK K                       +++
Sbjct: 386 LDEANQMMDLMVSKGCDPDIWTYNILINGFCKAK-----------------------QVD 422

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +   L  +MS  G I D VTY+ ++ GFC+  +L  AKK+ Q+M   G  P  ++Y   L
Sbjct: 423 DGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILL 482

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +GLC NG+  EA  +++   +     +   Y++++HG+    K+ +A  +   +  KG  
Sbjct: 483 DGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVK 542

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
                 N+++  LC+   +  A    ++    G   +   + +LIR   +  D+  ++ L
Sbjct: 543 RDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQL 602

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           +++M  C    D  T   ++D LS +G ++++    + MLS
Sbjct: 603 IEEMKRCGFSSDASTVKIVMDMLS-SGELDKS---FLNMLS 639



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 76/168 (45%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++   +++    AK+V + M  +G+      ++ L+      G+L  A+ +L
Sbjct: 439 DTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGIL 498

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M K  +  ++ I N  IH +   NK+  A      +   G+  ++ +YN ++ G C  
Sbjct: 499 DQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKR 558

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
             + +A  L  +M   G  PD  +Y T++    +   I     L+E+M
Sbjct: 559 SSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEM 606


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 253/521 (48%), Gaps = 63/521 (12%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           MA  G +     ++ L+    ++G L  A  +L  M  A  APN++     I  L    +
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
              A++ ++RM  +G  P+++TYN LI G C  +R+ DA  ++ E+   G +P+ ++Y T
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 287 VMGYLCKEKRIKEVRDLMEKMV-----------NDSNLFHDQGRIEEAKELV---NQMSQ 332
           ++ + C+ +R+ + R L+ +M+            D      + R + ++      ++M +
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G IPDVVTY   ++G C+ G+LD+  +ML++M   G  P+ V++ + ++GLC   +  +
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLR-------------------------------- 420
           A ++     E    P+++TYS+++  L                                 
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAF 300

Query: 421 -----REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
                R GK   A +++  M++ G  P  +  N +I  LC+ G +D A K  ++ L+ GC
Sbjct: 301 IGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGC 360

Query: 476 A-VNVVNFTSLIRGFCQKGDLEEALSLLDDM---YLCKKDPDTVTYTTIIDALSKNGRVE 531
              +V+ F +LI GFC+ G L +A  LL +M    +C   PD VTY T+ID  SK G ++
Sbjct: 361 CKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICV--PDVVTYNTLIDGQSKFGSLK 418

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQV 588
           +A  L+ +M + G  P VVTY  +I+ Y + G  E+   L ++M S + C      YN V
Sbjct: 419 QAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEM-SAKGCFPDIITYNTV 477

Query: 589 IENLCSFGYLEEAGKILGKVLRTAS--KADASTCHVLVESY 627
           +      G + +A  +  ++    S    DA T  +L++ Y
Sbjct: 478 LSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGY 518



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 209/445 (46%), Gaps = 25/445 (5%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M ++   P+++  NT I  L    KL K L  LE M   GI P+V+T+  +I G C  +R
Sbjct: 178 MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANR 237

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----------VNDS 311
           I DA ++   M  +GC PD ++Y  ++  L +  R+  V +++E M          V   
Sbjct: 238 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTH 297

Query: 312 NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N F       G+   AK ++  M + G +P++++Y  V++G C+ G +D A K+ ++M  
Sbjct: 298 NAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLD 357

Query: 368 HGC-KPNTVSYTAFLNGLCHNGKSLEAREM-INTSEEEWWTPNAITYSVVMHGLRREGKL 425
            GC KP+ + +   ++G C  G+  +A ++ I    +    P+ +TY+ ++ G  + G L
Sbjct: 358 SGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSL 417

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A  +++EM   G  P  V    LI    + G  + A+    E   KGC  +++ + ++
Sbjct: 418 KQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTV 477

Query: 486 IRGFCQKGDLEEA----LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +  F + G + +A      L +    C   PD +TY  +ID   +    E+   L+ +M 
Sbjct: 478 LSAFSKAGMMSKAEGVYQQLKNKTSYCS--PDAITYRILIDGYCRAEDTEQGLTLLQEMT 535

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVED-LLKLLEKMLSKQKCRTA--YNQVIENLCSFGYL 598
           ++G      TY  +I +  +   V    L + ++ML +    +A  +N ++      G +
Sbjct: 536 ARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDV 595

Query: 599 EEAGKILGKVLRTASKADASTCHVL 623
             A  ++ ++       DAS    L
Sbjct: 596 NSARSMVQEMNEKGHLVDASNLEAL 620



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 185/364 (50%), Gaps = 8/364 (2%)

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M+  G    VVTYT +++G C+ G+LD A+ +LQ+M   GC PN V+YTA ++GLC   +
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A + +         P+ +TY+ ++HGL    ++ +A  V++E+V+ GF P  +  + 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL--DDMYL 507
           L+   CR  ++D A+  ++E + +G   N+V +   I GFC+             D+M  
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
             + PD VTY T I  L K G++++  E++ +M   G+ P VVT+ ++I   C+  R++D
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 568 LLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILG--KVLRTASKADASTCHV 622
             ++ + ML ++ C      Y+ +++NL     L+   ++L   + ++     +  T + 
Sbjct: 241 AFQVFKGML-ERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNA 299

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            + +    G   LA  +   M     +P+L     V + L   G  ++A  L  + ++ G
Sbjct: 300 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 359

Query: 683 HIQP 686
             +P
Sbjct: 360 CCKP 363



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 201/453 (44%), Gaps = 63/453 (13%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + +  ++  L K      A +V + M  RG  C P++ +Y  ++   SRA +L     
Sbjct: 221 DVVTFCSIISGLCKANRIDDAFQVFKGMLERG--CVPDSLTYSIMLDNLSRANRLDTVDE 278

Query: 198 VLSMMQ--KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           VL  MQ  KA     +   N  I  L    K   A   L  M  +G  PN+L+YN +I G
Sbjct: 279 VLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDG 338

Query: 256 YCDLHRIKDAIKLIDEMPLKGC-SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
            C    + DA KL  +M   GC  PD + + T++   CK  R+ +   L+ +M       
Sbjct: 339 LCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEM------- 391

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
                  +AK +        C+PDVVTY  +++G  + G L QAK +LQ+M   GCKPN 
Sbjct: 392 -------KAKNI--------CVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNV 436

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y A +NG   +G   EA  + +    +   P+ ITY+ V+    + G +S+A  V ++
Sbjct: 437 VTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQ 496

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           +  K  + +P                                 + + +  LI G+C+  D
Sbjct: 497 LKNKTSYCSP---------------------------------DAITYRILIDGYCRAED 523

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV-EEATELMMKMLSKGLVPTVVTYR 553
            E+ L+LL +M       D+ TY  +I  L++   V  +A  +  +ML +  VP+   + 
Sbjct: 524 TEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFN 583

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN 586
           +++  + + G V     ++++M  K     A N
Sbjct: 584 SLVRLFLRTGDVNSARSMVQEMNEKGHLVDASN 616



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 200/441 (45%), Gaps = 71/441 (16%)

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMS 331
           M   G     V+Y T++  LCK                        G ++ A+ L+ +M+
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKS-----------------------GDLDAAQALLQKMA 37

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
             GC P+VVTYTA+++G C+      A + +++M   GC+P+ V+Y + ++GLC   +  
Sbjct: 38  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 97

Query: 392 EAREMINTSEEEWWTPNAITYSVVM------------HGLRREGKL-SEACDVV------ 432
           +A  ++       + PN ITYS ++             GL RE  L    C++V      
Sbjct: 98  DAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCI 157

Query: 433 ------------------REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
                              EM++ G  P  V  N  I  LC+ GK+D   + ++E    G
Sbjct: 158 FGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGG 217

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              +VV F S+I G C+   +++A  +   M      PD++TY+ ++D LS+  R++   
Sbjct: 218 IPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVD 277

Query: 535 ELM--MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIE 590
           E++  M+ +  G V  V T+   I   C+ G+      +L  M+         +YN VI+
Sbjct: 278 EVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVID 337

Query: 591 NLCSFGYLEEAGKILGKVLRTA-SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL- 648
            LC  G +++A K+  K+L +   K D    + L+  +   G    A+++   M  +N+ 
Sbjct: 338 GLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNIC 397

Query: 649 IPDLKLCKKVSERLILEGKSE 669
           +PD+     V+   +++G+S+
Sbjct: 398 VPDV-----VTYNTLIDGQSK 413


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 158/637 (24%), Positives = 276/637 (43%), Gaps = 99/637 (15%)

Query: 89  SAWSPKLEGELRNLLRSLKPR----QICAVLRSQADERVALQFFYWADRQWRYRHDPIVY 144
           S+WS      +RN+L  +  +     + AVLRS      A+ FF WA  Q  ++HD   Y
Sbjct: 66  SSWSVH---NIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTY 122

Query: 145 YMMLEIL-----------------------------------SKTKLCQGAKRVLRLMAR 169
             ++ +L                                   ++T+    A     +M R
Sbjct: 123 NCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKR 182

Query: 170 RGIECRPEAFSYLMVA--YSRAGKLRNAMYVL-SMMQKAAVAPNLLICNTAIHVLVVGNK 226
           +   C+P+  ++L++     +AG    A  V   MM    V P+  +    +  L+   +
Sbjct: 183 K--RCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +A     +M+  G  P+ + YN +I G       ++A+K++D M  K C P +V+Y  
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGI 300

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMG 334
           ++  LCK   ++   +L   M            ++L H     GR++EA  L ++M + G
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             PDV+T+T +++G C+ G  +QA K  ++M   GCKPN V+YT  + GL   G+   A 
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT----------- 443
            ++         P+++TY  ++ G  + G+L EA  ++ E+ K    P            
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGL 480

Query: 444 ----PVEINL---------------------LIQSLCREGKMDGAKKFMQECLNKGCAVN 478
                VE  L                     +I  LC+ G++D A +  Q  +++GC  +
Sbjct: 481 CDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPD 540

Query: 479 VVNFTSLIRGFCQKGD--LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
              +  LI G C+  +  +E A +LL D+      PD VTYT +   L K G V+ A ++
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKM 600

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCS 594
           + +  S+G    VV Y  +    C  G+V+  + L ++M+ +       AY  +I  L  
Sbjct: 601 LEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIK 660

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
              LE+A K   +++    K   +T   LV++  + G
Sbjct: 661 VKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/545 (25%), Positives = 244/545 (44%), Gaps = 53/545 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  ++  M+  L K K  + A+ V   M + G      A++ ++   ++AG  + A+ VL
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M   A  P  +     ++ L     L +A      M  +G  PN + Y  LI G+   
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R+K+A  L DEM   G  PD +++  ++  LCK    ++     E+M+           
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     GR+  A  ++  M   GC PD VTY  +++GFC++G LD+A ++L ++  
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDK 463

Query: 368 HGCKPNTVSYTAFLNGLCHNG---KSL--------------------------------- 391
               PN   Y++ +NGLC  G   K+L                                 
Sbjct: 464 CSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLD 523

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGL--RREGKLSEACDVVREMVKKGFFPTPVEINL 449
           EA  +      E   P+A TY+++++GL   RE ++  A  ++ ++ K G+ P  V    
Sbjct: 524 EACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTP 583

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L   LC+ G++D A K ++E  ++G   +VV +T+L  G C +G ++ A+SL  +M    
Sbjct: 584 LCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQG 643

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             PD   Y  II+ L K  ++E+A +   +M+ KG  PTV TY  ++   C  G V++  
Sbjct: 644 GAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAF 703

Query: 570 KLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
              E ML++ +   +   Y+ +I   C    ++ A K+   ++   +   A T   L + 
Sbjct: 704 HRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDG 763

Query: 627 YLNKG 631
            +  G
Sbjct: 764 LVRSG 768



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 219/437 (50%), Gaps = 27/437 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  +++ LSK      A R+++ M   G  C P++ +Y  L+  + + G+L  A  +L
Sbjct: 401 VTYTTIIQGLSKIGRVANAFRIMKGMIAHG--CFPDSVTYICLLDGFCKLGRLDEAAQLL 458

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR-FLERMQLAGITPNVLTYNCLIKGYCD 258
             + K + +PNL + ++ ++ L  G  + K L    E+ + A  T +      +I G C 
Sbjct: 459 DELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCK 518

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
             R+ +A ++   M  +GC PD  +Y  ++  LC+ +                     + 
Sbjct: 519 TGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSR---------------------EN 557

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           R+E A  L++ + ++G +PD VTYT +  G C++GE+D+A KML++    G   + V+YT
Sbjct: 558 RVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYT 617

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           A   GLC+ G+   A  +      +   P+A  Y  +++GL +  KL +AC    EM+ K
Sbjct: 618 ALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGK 677

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV-NVVNFTSLIRGFCQKGDLEE 497
           G  PT      L+Q+LC  G +D A    +  L +G  V +V+ + +LI GFC+   ++ 
Sbjct: 678 GQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDA 737

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           AL L +DM      P  VT  ++ D L ++G+ E+A EL+ +M + G  P   T+  ++ 
Sbjct: 738 ALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILD 797

Query: 558 RYCQVGRVEDLLKLLEK 574
              +      LLKL+++
Sbjct: 798 GLRKSDESGKLLKLVQE 814


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 124/408 (30%), Positives = 216/408 (52%), Gaps = 28/408 (6%)

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
           VGN + +A+     M       +  TY+ L+ G C+  RI +A+ L+DEM ++G  P+ V
Sbjct: 13  VGN-VDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPV 71

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           ++  ++  LCK                       +G +  A +LV+ M   GC+P+ VTY
Sbjct: 72  AFNVLISALCK-----------------------KGDLSRASKLVDNMFLKGCVPNEVTY 108

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
            ++V+G C  G+LD+A  +L +M  + C PN +++   ++G   +G++L+   ++ + EE
Sbjct: 109 NSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEE 168

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
           + +  N  +YS ++ GL +EGK      + +EMV+KG  P  +  + LI  LCREGK D 
Sbjct: 169 KGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDE 228

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           AK+++ E  NKG   N   ++SL+ G+ + GD+ +A+ +  +M     +   V Y+ +I+
Sbjct: 229 AKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILIN 288

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK---- 578
            L KNG+++EA  +  +MLS+G+   VV Y ++IH +C    VE  +KL  +ML      
Sbjct: 289 GLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKL 348

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           Q     YN ++   C+   +  A  IL  +L      D  TC + +++
Sbjct: 349 QPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKT 396



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 199/385 (51%), Gaps = 16/385 (4%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           +++A  R G +  A+ V   M       +    +T +H L    ++ +A+  L+ MQ+ G
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             PN + +N LI   C    +  A KL+D M LKGC P++V+Y +++  LC + ++ +  
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 302 DLMEKMV------NDSNL------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            L+ +MV      ND         F   GR  +   ++  + + G   +  +Y+++++G 
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
            + G+ +   ++ ++M   GCKPNT+ Y+A ++GLC  GK  EA+E +   + +  TPN+
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNS 245

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            TYS +M G    G + +A  V +EM         V  ++LI  LC+ GK+  A    ++
Sbjct: 246 FTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQ 305

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC---KKDPDTVTYTTIIDALSK 526
            L++G  ++VV ++S+I GFC    +E+ + L + M LC   K  PD VTY  +++A   
Sbjct: 306 MLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQM-LCHNPKLQPDVVTYNILLNAFCT 364

Query: 527 NGRVEEATELMMKMLSKGLVPTVVT 551
              V  A +++  ML +G  P  +T
Sbjct: 365 KNSVSRAIDILNTMLDQGCDPDFIT 389



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 199/442 (45%), Gaps = 37/442 (8%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  V R M+ R        +S LM      G++  A+ +L  MQ     PN +  N  I 
Sbjct: 19  AVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLIS 78

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L     L++A + ++ M L G  PN +TYN L+ G C   ++  A+ L++ M    C P
Sbjct: 79  ALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVP 138

Query: 280 DKVSYYTVMGYLCKEKR----IKEVRDLMEKMVND---------SNLFHDQGRIEEAKEL 326
           + +++ T++    K  R    ++ +  L EK             S LF  +G+ E   +L
Sbjct: 139 NDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFK-EGKGEHGMQL 197

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
             +M + GC P+ + Y+A+++G CR G+ D+AK+ L +M + G  PN+ +Y++ + G   
Sbjct: 198 WKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFE 257

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G   +A  +     +     + + YS++++GL + GKL EA  V ++M+ +G     V 
Sbjct: 258 AGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVA 317

Query: 447 INLLIQSLCREGKMDGAKKFMQE--CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
            + +I   C    ++   K   +  C N     +VV +  L+  FC K  +  A+ +L+ 
Sbjct: 318 YSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNT 377

Query: 505 MYLCKKDPDTVTYTTIIDALSKN---------------------GRVEEATELMMKMLSK 543
           M     DPD +T    +  L  N                      R   A+ ++  ML K
Sbjct: 378 MLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQK 437

Query: 544 GLVPTVVTYRTVIHRYCQVGRV 565
            L+P   T+   + + C+  +V
Sbjct: 438 FLLPKPSTWALAVQQLCKPMKV 459



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 117/237 (49%), Gaps = 4/237 (1%)

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           ++ +LCR G +D A +  +   ++ C  +   +++L+ G C +G ++EA+SLLD+M +  
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P+ V +  +I AL K G +  A++L+  M  KG VP  VTY +++H  C  G+++  +
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 570 KLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            LL +M++  KC      +  +++     G   +  ++L  +     + +  +   L+  
Sbjct: 126 SLLNRMVA-NKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISG 184

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
              +G      ++   M  +   P+  +   + + L  EGK +EA   ++    +GH
Sbjct: 185 LFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGH 241



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 146/342 (42%), Gaps = 44/342 (12%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRN 194
           YR +   Y  ++  L K    +   ++ + M  +G  C+P    +S L+    R GK   
Sbjct: 171 YRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG--CKPNTIVYSALIDGLCREGKPDE 228

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A   L  M+     PN    ++ +        + KA+   + M       + + Y+ LI 
Sbjct: 229 AKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILIN 288

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G C   ++K+A+ +  +M  +G   D V+Y +++   C  + +++   L  +M     L 
Sbjct: 289 GLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQM-----LC 343

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
           H+  +++               PDVVTY  ++N FC    + +A  +L  M   GC P+ 
Sbjct: 344 HNP-KLQ---------------PDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDF 387

Query: 375 VSYTAFLNGLCHN-GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
           ++   FL  L  N     + RE ++               +V+  ++R+  +  A +++ 
Sbjct: 388 ITCDIFLKTLRDNMDPPQDGREFLD--------------ELVVRLIKRQRTVG-ASNIIE 432

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
            M++K   P P    L +Q LC+  K+   +K + EC ++ C
Sbjct: 433 VMLQKFLLPKPSTWALAVQQLCKPMKV---RKTISECQSRMC 471


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 264/604 (43%), Gaps = 55/604 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D   Y ++L+ L        A  +LR+MA  G  C P+  +Y  V   + + G +  A  
Sbjct: 183 DVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACD 242

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  + P+L+  ++ +H L     + KA  FL +M   G+ P+  TYN LI GY 
Sbjct: 243 LFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 302

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              + K+A+++  EM  +   PD V+  T+MG LCK  +IKE RD+ + M          
Sbjct: 303 STGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 362

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 N +  +G + +  +L + M   G  PD+ T+  ++  +   G LD+A  +  +M
Sbjct: 363 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 422

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
             HG KP+ V+Y   +  LC  GK  +A E  N   ++   P+   Y  ++ G    G L
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSL 482

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A +++ E++  G     V    +I +LC+ G++  A+      +N G   + V +  L
Sbjct: 483 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 542

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           + G+C  G +E+AL + D M     +P+ V Y T+++   K GR++E   L  +ML KG+
Sbjct: 543 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602

Query: 546 VPTVVTYRTVIHRYCQVGRVED----LLKLLEKMLSKQKCR------------------- 582
            P+ + Y  +I    + GR         ++ E  ++  KC                    
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662

Query: 583 --------------TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
                            N +I  +     +EEA  +   + R+     A T  +++ + L
Sbjct: 663 LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLL 722

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
            +G+   A  +   M N    PD +L   V   L+ + +   A   + +  ER      S
Sbjct: 723 KEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNF----S 778

Query: 689 EEHL 692
            EHL
Sbjct: 779 LEHL 782



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 221/524 (42%), Gaps = 72/524 (13%)

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKAL--RFLERMQLAGI-TPNVLTYNCLIKGYCDLHRI 262
           A AP+   C +       G  LA AL  R   R Q   + +P   TY  L+      HR 
Sbjct: 77  ARAPSSAACGS-------GPALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRP 129

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
           + A+    ++   G   D +    ++   C+ KR  E  D+                   
Sbjct: 130 ELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI------------------- 170

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG--CKPNTVSYTAF 380
              L+++  ++GC+PDV +Y  ++   C  G+  QA  +L+ M   G  C P+ V+Y   
Sbjct: 171 ---LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH----------------------- 417
           ++G    G   +A ++     +    P+ +TYS V+H                       
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 287

Query: 418 ------------GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
                       G    G+  EA  V +EM ++   P  V +N L+ SLC+ GK+  A+ 
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
                  KG   +V ++T ++ G+  KG L +   L D M      PD  T+  +I A +
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 407

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RT 583
             G +++A  +  +M   G+ P VVTY TVI   C++G+++D ++   +M+ +     + 
Sbjct: 408 NCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKY 467

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
           AY+ +I+  C+ G L +A +++ +++    + D      ++ +    G  + A  +    
Sbjct: 468 AYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLT 527

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
            N  L PD  +   + +   L GK E+A  +    V  G I+P 
Sbjct: 528 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG-IEPN 570



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 14/250 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D + +  ++  L K      A+ +  L    G+      ++ LM  Y   GK+  A+ 
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   M  A + PN++   T ++      ++ + L     M   GI P+ + YN +I G  
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG------------YLCKEKRIKEVR-DLM 304
           +  R   A     EM   G + +K +Y  V+             +L KE R   V+ D++
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                 + +F  + R+EEAK+L   +S+ G +P  VTY+ ++    + G +++A+ M   
Sbjct: 678 TLNTMIAGMFQTR-RVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSS 736

Query: 365 MYHHGCKPNT 374
           M + GC+P++
Sbjct: 737 MQNAGCEPDS 746


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 256/543 (47%), Gaps = 39/543 (7%)

Query: 166 LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
           +M   G    P  F+ L+ AY R+G    A  +L  M      P  ++ N  I  +    
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 226 KLAK------ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L        A R    M   G+  N +      +  C + + + A  +I EM  KG  P
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
           D  +Y  V+GYLC   ++++   L ++M  +             + F   G IE+A+   
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           ++M Q GC P+VVTYTA+++ + +  +L +A ++ + M  +GC PN V+YTA ++G C  
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240

Query: 388 GKSLEAREM-----------------INTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           G++ +A ++                     + E   PN +TY  ++ GL +  K+ EA D
Sbjct: 241 GETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARD 300

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           ++  M  +G  P  +  + LI   C+ GK+D A++   + L  GC+ NV  ++SLI    
Sbjct: 301 LLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLF 360

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +   L+ AL +L  M      P+ V YT ++D L K G+ +EA  LM+ M  KG  P VV
Sbjct: 361 KDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVV 420

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKV 608
           TY  +I  + + GRV+  L+LL+ M SK        Y  +I + C+ G L++A K+L ++
Sbjct: 421 TYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEM 480

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
            +T           ++E + ++ +  L   +   +     +P L + K + +  I  G+ 
Sbjct: 481 KQTYWPKHIGMYRKVIEGFSHEFVASLG--LLAELSEDGSVPILPVYKLLIDNFIKAGRL 538

Query: 669 EEA 671
           E A
Sbjct: 539 EMA 541



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 237/496 (47%), Gaps = 15/496 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  ++  L      + A ++ + M R GI   P+ ++Y  L+  + + G +  A  
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGI--TPDVYTYTTLLDRFCKVGLIEQARN 178

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
               MQ+   APN++     IH  +   KL++A    E M   G  PN++TY  LI G+C
Sbjct: 179 WFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHC 238

Query: 258 DLHRIKDAIKLIDEMPLKGCS-PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
                + A ++   M       PD   Y+ ++    KE  +     L++ +         
Sbjct: 239 KAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAH----- 293

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
             +++EA++L+  MS  GC P+ + Y A+++GFC+VG+LD+A+++  +M  HGC PN  +
Sbjct: 294 --KVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYT 351

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y++ ++ L  + +   A +++    E    PN + Y+ ++ GL + GK  EA  ++  M 
Sbjct: 352 YSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMME 411

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +KG +P  V    +I    + G++D   + +Q   +KGCA N + +  LI   C  G L+
Sbjct: 412 EKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLD 471

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +A  LL++M           Y  +I+  S       +  L+ ++   G VP +  Y+ +I
Sbjct: 472 DAHKLLEEMKQTYWPKHIGMYRKVIEGFSH--EFVASLGLLAELSEDGSVPILPVYKLLI 529

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKC-RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
             + + GR+E  L+L E++ S     +  Y  +IE+L     +++A K+   + R     
Sbjct: 530 DNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVP 589

Query: 616 DASTCHVLVESYLNKG 631
           + S    L++  L  G
Sbjct: 590 ELSMLVCLIKGLLRVG 605



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 240/519 (46%), Gaps = 21/519 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  V+R M  +G       +S ++     A K+  A  +   M++  + P++    T + 
Sbjct: 106 AYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLD 165

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A  + + MQ  G  PNV+TY  LI  Y    ++  A ++ + M   GC P
Sbjct: 166 RFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVP 225

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG---RI--EEAKELVNQMSQMG 334
           + V+Y  ++   CK    ++   +  +M ND     D     RI   E KE         
Sbjct: 226 NIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKE--------- 276

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P+VVTY A+V+G C+  ++ +A+ +L+ M   GC+PN + Y A ++G C  GK  EA+
Sbjct: 277 --PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQ 334

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E+         +PN  TYS ++  L ++ +L  A  V+ +M++    P  V    ++  L
Sbjct: 335 EVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGL 394

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ GK D A + M     KGC  NVV +T++I GF + G ++  L LL  M      P+ 
Sbjct: 395 CKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNF 454

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ--VGRVEDLLKLL 572
           +TY  +I+     G +++A +L+ +M        +  YR VI  +    V  +  L +L 
Sbjct: 455 ITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELS 514

Query: 573 EKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           E           Y  +I+N    G LE A + L + L + S A  +T   L+ES      
Sbjct: 515 ED--GSVPILPVYKLLIDNFIKAGRLEMALE-LHEELSSFSAAYQNTYVSLIESLTLACK 571

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
              A+K+   M  R  +P+L +   + + L+  GK EEA
Sbjct: 572 VDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEA 610



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 178/410 (43%), Gaps = 62/410 (15%)

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           GC P  + + ++V+ +CR G+   A K+L++M   G +P  V Y   + G+C   + L +
Sbjct: 6   GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICST-EDLPS 64

Query: 394 REMINTSEEEW-------WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            E+I  +E  +          N +        L   GK  +A +V+REM+ KGF P    
Sbjct: 65  MEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSST 124

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            + +I  LC   K++ A +  QE    G   +V  +T+L+  FC+ G +E+A +  D+M 
Sbjct: 125 YSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQ 184

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                P+ VTYT +I A  K  ++  A E+   MLS G VP +VTY  +I  +C+ G  E
Sbjct: 185 QDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETE 244

Query: 567 DLLKLLEKM--------------------------------------------------- 575
              ++  +M                                                   
Sbjct: 245 KACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLET 304

Query: 576 LSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           +S + C   +  Y+ +I+  C  G L+EA ++  K+L      +  T   L++       
Sbjct: 305 MSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKR 364

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             LA KV  +M   +  P++ +  ++ + L   GK++EA  LML   E+G
Sbjct: 365 LDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKG 414



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 165/384 (42%), Gaps = 32/384 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++ L K    + A+ +L  M+  G E     +  L+  + + GKL  A  V + 
Sbjct: 280 VTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTK 339

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M     +PN+   ++ I  L    +L  AL+ L +M      PNV+ Y  ++ G C + +
Sbjct: 340 MLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGK 399

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
             +A +L+  M  KGC P+ V+Y  ++                       + F   GR++
Sbjct: 400 TDEAYRLMLMMEEKGCYPNVVTYTAMI-----------------------DGFGKAGRVD 436

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
              EL+  M+  GC P+ +TY  ++N  C  G LD A K+L++M       +   Y   +
Sbjct: 437 RCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVI 496

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM--VKKG 439
            G  H  + + +  ++    E+   P    Y +++    + G+L  A ++  E+      
Sbjct: 497 EGFSH--EFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAA 554

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           +  T V    LI+SL    K+D A K   +   +G    +     LI+G  + G  EEAL
Sbjct: 555 YQNTYVS---LIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEAL 611

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDA 523
            L D   +C+ D   V     +D 
Sbjct: 612 QLSDS--ICQMDIHWVQQEQTVDT 633


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 158/598 (26%), Positives = 276/598 (46%), Gaps = 92/598 (15%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS--YLMVAYSRAGKLRNAMY 197
           D + Y  M++   K      A R  RL+   G+E  PE F+   L++ Y R G+LR A +
Sbjct: 182 DTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLE--PETFTCNALVLGYCRTGELRKACW 239

Query: 198 VLSMM-------------------------QKAAV----------APNLLICNTAIHVLV 222
           +  MM                         +KA V          +PN+      I  L 
Sbjct: 240 LFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLC 299

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              ++  A    + M   G+ P+V+TYN +I GY  L R+ DA+K+ + M   GC PD  
Sbjct: 300 KSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDW 359

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNL---------FHD-------- 316
           +Y T++  LC +K  +E  +L+   V +         +NL         F D        
Sbjct: 360 TYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 418

Query: 317 ---------------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                                + R++EAKEL+N++S  G +P+V+TYT++++G+C+ G++
Sbjct: 419 MSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKV 478

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D A ++L+ M   GC+PN  +Y + + GL  + K  +A  ++   +++   PN ITY+ +
Sbjct: 479 DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTL 538

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + G   E     A  +   M + G  P      +L  +LC+ G+ + A  F+   + KG 
Sbjct: 539 LQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGV 595

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
           A+  V +T+LI GF + G+ + A +L++ M      PD+ TY+ ++ AL K  R+ EA  
Sbjct: 596 ALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALP 655

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
           ++ +M  +G+  T+  Y  +I    + G+ +   ++  +M S   +   T Y   I + C
Sbjct: 656 ILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 715

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
             G LE+A  ++ K+ R     D  T ++L++   + G    A+    RM   +  P+
Sbjct: 716 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/592 (24%), Positives = 268/592 (45%), Gaps = 44/592 (7%)

Query: 100 RNLLRSLKPRQICAVLRSQA---DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKL 156
           + L  S+    +  + R+ +   +   AL FF W  R+  +RH    +  +L +LS+ + 
Sbjct: 46  KRLAPSVTAAHVADLFRADSTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLSRRRA 105

Query: 157 -------------CQGAKRVLRLMA------RRGIECR----PEAFSYLMVAYSRAGKLR 193
                        C      +R+ A      RR    R    P+ +++ + + +R     
Sbjct: 106 PAQYERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTE 165

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
               V S + +  + P+ +  NT I        L  A R+   +   G+ P   T N L+
Sbjct: 166 YMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALV 225

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-- 311
            GYC    ++ A  L   MPL GC  ++ SY  ++  LC  K +++   L   M  D   
Sbjct: 226 LGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCS 285

Query: 312 ----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                     +     GR+ +A+ L + M Q G +P V+TY A++ G+ ++G ++ A K+
Sbjct: 286 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI 345

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
            + M  +GC P+  +Y   + GLC + K+ EA E++N + +E +TP  +T++ +++G   
Sbjct: 346 KELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCM 404

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
             K  +A  +  +M+             LI SL ++ ++  AK+ + E    G   NV+ 
Sbjct: 405 AEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVIT 464

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +TS+I G+C+ G ++ AL +L  M      P+  TY +++  L K+ ++ +A  L+ KM 
Sbjct: 465 YTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ 524

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLE 599
             G++P V+TY T++   C     ++  +L E M     +    AY  + + LC  G  E
Sbjct: 525 KDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAE 584

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           EA   + +     +K   +T   L++ +   G    A  +  RM +    PD
Sbjct: 585 EAYSFIVRKGVALTKVYYTT---LIDGFSKAGNTDFAATLIERMIDEGCTPD 633



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 234/519 (45%), Gaps = 27/519 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  V+  ++  L K    + AK +L  ++  G+      ++ ++  Y ++GK+  A+ VL
Sbjct: 426 DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 485

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            MM++    PN    N+ ++ LV   KL KA+  L +MQ  GI PNV+TY  L++G CD 
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE 545

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD-LMEKMVNDSNL----- 313
           H   +A +L + M   G  PD+ +Y  +   LCK  R +E    ++ K V  + +     
Sbjct: 546 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTL 605

Query: 314 ---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
              F   G  + A  L+ +M   GC PD  TY+ +++  C+   L++A  +L QM   G 
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           K    +YT  ++ +   GK   A+ M N        P+A TY+V ++   +EG+L +A D
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 725

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR--- 487
           ++ +M ++G  P  V  N+LI      G +D A   ++  +   C  N   +  L++   
Sbjct: 726 LILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLL 785

Query: 488 -------------GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
                        G     +L+    LL+ M     +P   TY+++I    K GR+EEA 
Sbjct: 786 KGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC 845

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENL 592
            L+  M  KGL P    Y  +I   C     E  L  +  M     Q    +Y  ++  L
Sbjct: 846 LLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGL 905

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           C+ G  E+   +   +L      D     +L +  L  G
Sbjct: 906 CNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/537 (24%), Positives = 230/537 (42%), Gaps = 68/537 (12%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+ +L    + G       F+ L+  Y  A K  +A+ + + M  +    +L +    I+
Sbjct: 376 AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLIN 435

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L+  ++L +A   L  +   G+ PNV+TY  +I GYC   ++  A++++  M   GC P
Sbjct: 436 SLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQP 495

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH------------DQGRIEEAKELV 327
           +  +Y ++M  L K+K++ +   L+ KM  D  + +            D+   + A  L 
Sbjct: 496 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 555

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
             M Q G  PD   Y  + +  C+ G  ++A   + +    G     V YT  ++G    
Sbjct: 556 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKA 612

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G +  A  +I    +E  TP++ TYSV++H L ++ +L+EA  ++ +M  +G   T    
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            +LI  + REGK D AK+   E  + G   +   +T  I  +C++G LE+A  L+  M  
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 732

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEA---------------------------------- 533
               PD VTY  +ID     G ++ A                                  
Sbjct: 733 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 792

Query: 534 -----------------TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
                             +L+ +M+  GL PTV TY ++I  +C+ GR+E+   LL+ M 
Sbjct: 793 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 852

Query: 577 SK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            K        Y  +I+  C   + E+A   +  +     +    +  +LV    N+G
Sbjct: 853 GKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEG 909



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 213/521 (40%), Gaps = 105/521 (20%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           I Y  +++   K+     A  VL++M R G  C+P A++Y  LM    +  KL  AM +L
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDG--CQPNAWTYNSLMYGLVKDKKLHKAMALL 520

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN-----VLT------ 248
           + MQK  + PN++   T +      +    A R  E M+  G+ P+     VLT      
Sbjct: 521 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 580

Query: 249 ---------------------YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
                                Y  LI G+        A  LI+ M  +GC+PD  +Y  +
Sbjct: 581 GRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVL 640

Query: 288 MGYLCKEKRIKEVRDLMEKM--------VNDSNLFHDQ----GRIEEAKELVNQMSQMGC 335
           +  LCK+KR+ E   ++++M        +    +  D+    G+ + AK + N+M+  G 
Sbjct: 641 LHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH 700

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA-- 393
            P   TYT  +N +C+ G L+ A+ ++ +M   G  P+ V+Y   ++G  H G    A  
Sbjct: 701 KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFS 760

Query: 394 --REMINTS-EEEWWT-------------------------------------------- 406
             + M+  S E  +WT                                            
Sbjct: 761 TLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHG 820

Query: 407 --PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P   TYS ++ G  + G+L EAC ++  M  KG  P      LLI+  C     + A 
Sbjct: 821 LNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKAL 880

Query: 465 KF---MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            F   M EC   G    + ++  L+ G C +GD E+  SL  D+     + D V +  + 
Sbjct: 881 SFVSIMSEC---GFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 937

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           D L K G V+   +++  M  +    +  TY  V ++  +V
Sbjct: 938 DGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKMHEV 978



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 146/322 (45%), Gaps = 7/322 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++L  L K K    A  +L  M+ RGI+C   A++ L+    R GK  +A  + 
Sbjct: 633 DSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMY 692

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M  +   P+       I+      +L  A   + +M+  G+ P+V+TYN LI G   +
Sbjct: 693 NEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHM 752

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             I  A   +  M    C P+  +Y  ++ +L K   +  VR +      D++   +   
Sbjct: 753 GYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSV------DTSGMWNLIE 805

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++   +L+ +M + G  P V TY++++ GFC+ G L++A  +L  M   G  PN   YT 
Sbjct: 806 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +   C      +A   ++   E  + P   +Y +++ GL  EG   +   +  ++++ G
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 925

Query: 440 FFPTPVEINLLIQSLCREGKMD 461
           +    V   +L   L + G +D
Sbjct: 926 YNHDEVAWKILNDGLLKAGYVD 947


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 256/537 (47%), Gaps = 62/537 (11%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           ++L+ L      + A+RV   M  R       +F  L   Y RAG+  +A+ VL  M   
Sbjct: 150 LLLQALCDAGRMELAQRVFDAMPARN----EFSFGILARGYCRAGRSIDALKVLDGMPSM 205

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
               NL++CNT +        + +A R +ERM++ G+ PNV+T+N  I   C   R+ DA
Sbjct: 206 ----NLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDA 261

Query: 266 IKLIDEMP---LKGCS-PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            ++  +M      G   PD+V++  ++   C                       D G ++
Sbjct: 262 YRIFQDMQEDWQHGLPRPDQVTFDVMLSGFC-----------------------DAGFVD 298

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA+ LV+ M   G +  V +Y   ++G  R G + +A+++L++M H G +PN+ +Y   +
Sbjct: 299 EARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIV 358

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +GLC  GK+ +AR + N       +P+ +TY+ ++H    +G ++ A  ++ EM +KG  
Sbjct: 359 SGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCA 418

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P     N+L+QSL R G+   A++ ++    KG +++      +I G C+   L+ A+ +
Sbjct: 419 PNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDI 478

Query: 502 LDDMYLCKKD-----------------------PDTVTYTTIIDALSKNGRVEEATELMM 538
           +D M+                            PD +TY+ +I AL K GR +EA + ++
Sbjct: 479 VDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLL 538

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSF 595
           +M+ K + P  V Y T IH YC+ G+    +K+L  M  K+ C  +   YN +I      
Sbjct: 539 EMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDM-EKKGCNPSTRTYNLLIRGFEEK 597

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
              EE  K++ ++       +  T + L++S+  +G+   A  +   M    L+P++
Sbjct: 598 HKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNI 654



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 130/535 (24%), Positives = 241/535 (45%), Gaps = 43/535 (8%)

Query: 124 ALQFFYWADRQWRY---RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
           A + F      W++   R D + + +ML           A+ ++ +M   G   R E+++
Sbjct: 261 AYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYN 320

Query: 181 YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
             +    R G++  A  +L  M    + PN    N  +  L    K   A R    ++  
Sbjct: 321 RWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSG 380

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
            ++P+V+TY  L+  YC    I  A +++DEM  KGC+P+  +Y  ++  L +  R  E 
Sbjct: 381 VMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEA 440

Query: 301 RDLMEKM--------VNDSNLFHD----QGRIEEAKELVNQMSQMG-------------- 334
             L+E+M            N+  D      R++ A ++V+ M + G              
Sbjct: 441 ERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSV 500

Query: 335 ---------CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
                    C+PD +TY+ +++  C+ G  D+AKK L +M      P++V Y  F++G C
Sbjct: 501 VSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYC 560

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            +GK+  A +++   E++   P+  TY++++ G   + K  E   ++ EM +KG  P  +
Sbjct: 561 KHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVM 620

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD-D 504
             N LI+S C++G ++ A   + E L      N+ +F  LI+ +C+  D   A  + D  
Sbjct: 621 TYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAA 680

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           +  C +    V Y  +   L+  G+  EA  ++   L   +      Y+ +I   C+VG 
Sbjct: 681 LRTCGQ--KEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGE 738

Query: 565 VEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           V+    LL+ +++K+      A+  VI+ L   G  ++   +  K++  A + D 
Sbjct: 739 VDHAHSLLKLLIAKRHLFDPAAFMPVIDALGDRGKKQDVDMLSAKMMEMADRNDG 793



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 237/520 (45%), Gaps = 44/520 (8%)

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
           +A  P   + N  I   +  ++L       + + L+G  P+V T N L++  CD  R++ 
Sbjct: 104 SAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMEL 163

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL---------FH 315
           A ++ D MP +    ++ S+  +    C+  R  +   +++ M +  NL         F 
Sbjct: 164 AQRVFDAMPAR----NEFSFGILARGYCRAGRSIDALKVLDGMPS-MNLVVCNTVVAGFC 218

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM---YHHGC-K 371
            +G +EEA+ LV +M   G  P+VVT+ A ++  C+ G +  A ++ Q M   + HG  +
Sbjct: 219 KEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPR 278

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+ V++   L+G C  G   EAR +++      +     +Y+  + GL R G++ EA ++
Sbjct: 279 PDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQEL 338

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           +REM  +G  P     N+++  LC+EGK   A++      +   + +VV +TSL+  +C 
Sbjct: 339 LREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCS 398

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           KG++  A  +LD+M      P++ TY  ++ +L + GR  EA  L+ +M  KG       
Sbjct: 399 KGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAG 458

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSK----------------------QKC---RTAYN 586
              +I   C+  R++  + +++ M  +                      Q+C   +  Y+
Sbjct: 459 CNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYS 518

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I  LC  G  +EA K L +++      D+      +  Y   G   LA KV   M  +
Sbjct: 519 ILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKK 578

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
              P  +    +      + KSEE   LM    E+G I P
Sbjct: 579 GCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKG-ISP 617


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 247/503 (49%), Gaps = 20/503 (3%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
            +L  L K    + + +V  +M   G+      FS ++ A+   G++ +A+ +   M+K 
Sbjct: 167 FLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKV 226

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            VAPN++  N  IH L    +L +A +F E+M+   + P+++TY  LI G   L R  +A
Sbjct: 227 GVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEA 286

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NL 313
             ++ EM  +G +P+ V Y T++   C+   I     + + M+++               
Sbjct: 287 NCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQG 346

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           +    ++E A+ L+ +M   G + +  T+T+V++  C     D A   + +M     KPN
Sbjct: 347 YCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPN 406

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
               T  ++GLC NGK  EA E+     E+ +  N +T + ++HGL   G   EA  +++
Sbjct: 407 DGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLK 466

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM+++G     +  N LI + C+EGK++   K  +E + +G   ++  +  L+ G C  G
Sbjct: 467 EMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMG 526

Query: 494 DLEEALSLLDDMYLCKKD---PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
            +EEA  L  +   CKK+   PD  TY  +ID   K  RVEE  +L  +M++  +    V
Sbjct: 527 KIEEAGGLWHE---CKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAV 583

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKV 608
            Y T+I  YC+ G + +  +L + M S+   +T+  Y+ +I  L + G ++ A ++L ++
Sbjct: 584 VYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEM 643

Query: 609 LRTASKADASTCHVLVESYLNKG 631
            +     +      L+  Y   G
Sbjct: 644 RKEGLSPNVVCYTALIGGYCKLG 666



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 192/393 (48%), Gaps = 25/393 (6%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G+ P++ T N L+      + +K + ++ D M   G +PD   + T++            
Sbjct: 157 GLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMV------------ 204

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                      N F   GR+++A EL  +M ++G  P+VVTY  +++G C+ G LD+A +
Sbjct: 205 -----------NAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQ 253

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
             ++M     KP+ V+Y   +NGL    +  EA  ++    +  + PN + Y+ ++ G  
Sbjct: 254 FKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYC 313

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           R G +S A  +  +M+  G  P  V  N LIQ  C+  +M+ A+  ++E L  G  +N  
Sbjct: 314 RIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQG 373

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            FTS+I   C K   + AL  + +M L    P+    T ++  L +NG+  EA EL  ++
Sbjct: 374 TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL 433

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYL 598
           L KG     VT   +IH  C+ G  E+  KLL++ML +       +YN +I   C  G +
Sbjct: 434 LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKV 493

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           EE  K+  +++R   + D  T ++L+    N G
Sbjct: 494 EEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMG 526



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 231/497 (46%), Gaps = 49/497 (9%)

Query: 128 FYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA 185
           F + ++  + R  P  + Y +++  L K +    A  +L+ M+ RG       ++ L+  
Sbjct: 252 FQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDG 311

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
           Y R G +  A+ +   M    ++PN + CN+ I      N++  A   LE M   G   N
Sbjct: 312 YCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVIN 371

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
             T+  +I   C   R   A+  I EM L+   P+      ++  LC+  +  E  +L  
Sbjct: 372 QGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWY 431

Query: 306 KM---------VNDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
           ++         V  + L H   + G  EEA +L+ +M + G + D ++Y  ++   C+ G
Sbjct: 432 RLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEG 491

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           ++++  K+ ++M   G +P+  +Y   L+GLC+ GK  EA  + +  ++    P+A TY 
Sbjct: 492 KVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYG 551

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM------------- 460
           +++ G  +  ++ E   + +EMV        V    LI++ C  G M             
Sbjct: 552 IMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR 611

Query: 461 ----------------------DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
                                 D A + + E   +G + NVV +T+LI G+C+ G + + 
Sbjct: 612 GIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKV 671

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
            S+L +M +    P+ +TYT +I+   K G ++ A +L+ +M  KG+VP  VTY  + + 
Sbjct: 672 DSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNG 731

Query: 559 YCQVGRVEDLLKLLEKM 575
           +C+ G++E+ LK+ + M
Sbjct: 732 FCKEGKMEEALKVCDLM 748



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 181/373 (48%), Gaps = 13/373 (3%)

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           ++++ M+ +    PN  +    +  L    K ++A+    R+   G   N +T N LI G
Sbjct: 393 LFIMEMLLRN-FKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHG 451

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV------- 308
            C+    ++A KL+ EM  +G   D +SY T++   CKE +++E   L E+MV       
Sbjct: 452 LCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPD 511

Query: 309 --NDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
               + L H   + G+IEEA  L ++  + G  PD  TY  +++G+C+   +++ +K+ Q
Sbjct: 512 MYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQ 571

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M     + N V Y   +   C NG   EA  + +          + TYS ++HGL   G
Sbjct: 572 EMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIG 631

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
            +  A  ++ EM K+G  P  V    LI   C+ G+M      +QE        N + +T
Sbjct: 632 LVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYT 691

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            +I G C+ G+++ A  LL++M      PD VTY  + +   K G++EEA ++   M + 
Sbjct: 692 IMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTG 751

Query: 544 GLVPTVVTYRTVI 556
           G+    +TY T+I
Sbjct: 752 GISLDDITYTTLI 764



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 171/372 (45%), Gaps = 12/372 (3%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  R  +      + L+    + GK   A+ +   + +   A N +  N  IH L     
Sbjct: 398 MLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGS 457

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
             +A + L+ M   G+  + ++YN LI   C   ++++  KL +EM  +G  PD  +Y  
Sbjct: 458 KEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNM 517

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMG 334
           ++  LC   +I+E   L  +   + N             +    R+EE ++L  +M  M 
Sbjct: 518 LLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMK 577

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
              + V Y  ++  +C  G + +A ++   M   G    + +Y++ ++GL + G    A 
Sbjct: 578 IEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSAN 637

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           ++++   +E  +PN + Y+ ++ G  + G++ +   +++EM      P  +   ++I   
Sbjct: 638 QLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGH 697

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G M  A K + E   KG   + V + +L  GFC++G +EEAL + D M       D 
Sbjct: 698 CKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDD 757

Query: 515 VTYTTIIDALSK 526
           +TYTT+ID   K
Sbjct: 758 ITYTTLIDGWHK 769



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 174/364 (47%), Gaps = 3/364 (0%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           EL + ++  G  P + T   +++   +  E+  + ++   M H G  P+   ++  +N  
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  G+  +A E+    E+    PN +TY+ ++HGL + G+L EA     +M K+   P+ 
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V   +LI  L +  + D A   ++E  ++G A N V + +LI G+C+ G++  AL + DD
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      P++VT  ++I    K+ ++E A  L+ +ML+ G V    T+ +VIHR C   R
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCR 387

Query: 565 VED-LLKLLEKMLSKQKCRTA-YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
            +  LL ++E +L   K        ++  LC  G   EA ++  ++L     A+  T + 
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNA 447

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L+      G    A K+   M  R L+ D      +      EGK EE   L    V RG
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRG 507

Query: 683 HIQP 686
            IQP
Sbjct: 508 -IQP 510



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 31/218 (14%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           +   + +VY  ++    +    + A R+   M  RGI      +S L+   S  G + +A
Sbjct: 577 KIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSA 636

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVG----NKLAKALRFLERMQLAGITPNVLTYNC 251
             +L  M+K  ++PN+ +C TA   L+ G     ++ K    L+ M +  + PN +TY  
Sbjct: 637 NQLLDEMRKEGLSPNV-VCYTA---LIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTI 692

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           +I G+C L  +K A KL++EM  KG  PD V+Y  +    CKE                 
Sbjct: 693 MINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKE----------------- 735

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
                 G++EEA ++ + MS  G   D +TYT +++G+
Sbjct: 736 ------GKMEEALKVCDLMSTGGISLDDITYTTLIDGW 767


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 155/598 (25%), Positives = 274/598 (45%), Gaps = 92/598 (15%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS--YLMVAYSRAGKLRNAMY 197
           D + Y  M++   K      A R  RL+   G+E  PE F+   L++ Y R G+LR A +
Sbjct: 182 DTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLE--PETFTCNALVLGYCRTGELRKACW 239

Query: 198 VLSMM-----------------------------------QKAAVAPNLLICNTAIHVLV 222
           +  MM                                   ++   +PN+      I  L 
Sbjct: 240 LFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLC 299

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              ++  A    + M   G+ P+V+TYN +I GY  L R+ DA+K+ + M   GC PD  
Sbjct: 300 KSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDW 359

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNL---------FHD-------- 316
           +Y T++  LC +K  +E  +L+   V +         +NL         F D        
Sbjct: 360 TYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 418

Query: 317 ---------------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                                + R++EAKEL+N++S  G +P+V+TYT++++G+C+ G++
Sbjct: 419 MSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKV 478

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D A ++L+ M   GC+PN  +Y + + GL  + K  +A  ++   +++   PN ITY+ +
Sbjct: 479 DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTL 538

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + G   E     A  +   M + G  P      +L  +LC+ G+ + A  F+   + KG 
Sbjct: 539 LQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGV 595

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
           A+  V +T+LI GF + G+ + A +L++ M      PD+ TY+ ++ AL K  R+ EA  
Sbjct: 596 ALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALP 655

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
           ++ +M  +G+  T+  Y  +I    + G+ +   ++  +M S   +   T Y   I + C
Sbjct: 656 ILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 715

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
             G LE+A  ++ K+ R     D  T ++L++   + G    A+    RM   +  P+
Sbjct: 716 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 148/592 (25%), Positives = 269/592 (45%), Gaps = 44/592 (7%)

Query: 100 RNLLRSLKPRQICAVLRSQA---DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKL 156
           + L  S+    +  + R+++   +   AL FF W  R+  +RH    +  +L +LS+ + 
Sbjct: 46  KRLAPSVTAAHVADLFRAESTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLSRRRA 105

Query: 157 -------------CQGAKRVLRLMA------RRGIECR----PEAFSYLMVAYSRAGKLR 193
                        C      +R+ A      RR    R    P+ +++ + + +R     
Sbjct: 106 PAQYERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTE 165

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
               V S + +  + P+ +  NT I        L  A R    +   G+ P   T N L+
Sbjct: 166 YMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALV 225

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-- 311
            GYC    ++ A  L   MPL GC  ++ SY  ++  LC+ K ++E   L   M  D   
Sbjct: 226 LGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCS 285

Query: 312 ----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                     +     GR+ +A+ L + M Q G +P V+TY A++ G+ ++G ++ A K+
Sbjct: 286 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI 345

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
            + M  +GC P+  +Y   + GLC + K+ EA E++N + +E +TP  +T++ +++G   
Sbjct: 346 KELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCM 404

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
             K  +A  +  +M+             LI SL ++ ++  AK+ + E    G   NV+ 
Sbjct: 405 AEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVIT 464

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +TS+I G+C+ G ++ AL +L  M      P+  TY +++  L K+ ++ +A  L+ KM 
Sbjct: 465 YTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ 524

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLE 599
             G++P V+TY T++   C     ++  +L E M     +    AY  + + LC  G  E
Sbjct: 525 KDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAE 584

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           EA   + +     +K   +T   L++ +   G    A  +  RM +    PD
Sbjct: 585 EAYSFIVRKGVALTKVYYTT---LIDGFSKAGNTDFAATLIERMIDEGCTPD 633



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 234/519 (45%), Gaps = 27/519 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  V+  ++  L K    + AK +L  ++  G+      ++ ++  Y ++GK+  A+ VL
Sbjct: 426 DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 485

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            MM++    PN    N+ ++ LV   KL KA+  L +MQ  GI PNV+TY  L++G CD 
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE 545

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD-LMEKMVNDSNL----- 313
           H   +A +L + M   G  PD+ +Y  +   LCK  R +E    ++ K V  + +     
Sbjct: 546 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTL 605

Query: 314 ---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
              F   G  + A  L+ +M   GC PD  TY+ +++  C+   L++A  +L QM   G 
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           K    +YT  ++ +   GK   A+ M N        P+A TY+V ++   +EG+L +A D
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 725

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR--- 487
           ++ +M ++G  P  V  N+LI      G +D A   ++  +   C  N   +  L++   
Sbjct: 726 LILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLL 785

Query: 488 -------------GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
                        G     +L+    LL+ M     +P   TY+++I    K GR+EEA 
Sbjct: 786 KGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC 845

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENL 592
            L+  M  KGL P    Y  +I   C     E  L  +  M     Q    +Y  ++  L
Sbjct: 846 LLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGL 905

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           C+ G  E+   +   +L      D     +L +  L  G
Sbjct: 906 CNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/537 (24%), Positives = 230/537 (42%), Gaps = 68/537 (12%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+ +L    + G       F+ L+  Y  A K  +A+ + + M  +    +L +    I+
Sbjct: 376 AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLIN 435

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L+  ++L +A   L  +   G+ PNV+TY  +I GYC   ++  A++++  M   GC P
Sbjct: 436 SLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQP 495

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH------------DQGRIEEAKELV 327
           +  +Y ++M  L K+K++ +   L+ KM  D  + +            D+   + A  L 
Sbjct: 496 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 555

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
             M Q G  PD   Y  + +  C+ G  ++A   + +    G     V YT  ++G    
Sbjct: 556 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKA 612

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G +  A  +I    +E  TP++ TYSV++H L ++ +L+EA  ++ +M  +G   T    
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            +LI  + REGK D AK+   E  + G   +   +T  I  +C++G LE+A  L+  M  
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 732

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEA---------------------------------- 533
               PD VTY  +ID     G ++ A                                  
Sbjct: 733 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 792

Query: 534 -----------------TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
                             +L+ +M+  GL PTV TY ++I  +C+ GR+E+   LL+ M 
Sbjct: 793 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 852

Query: 577 SK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            K        Y  +I+  C   + E+A   +  +     +    +  +LV    N+G
Sbjct: 853 GKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEG 909



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 213/521 (40%), Gaps = 105/521 (20%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           I Y  +++   K+     A  VL++M R G  C+P A++Y  LM    +  KL  AM +L
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDG--CQPNAWTYNSLMYGLVKDKKLHKAMALL 520

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN-----VLT------ 248
           + MQK  + PN++   T +      +    A R  E M+  G+ P+     VLT      
Sbjct: 521 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 580

Query: 249 ---------------------YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
                                Y  LI G+        A  LI+ M  +GC+PD  +Y  +
Sbjct: 581 GRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVL 640

Query: 288 MGYLCKEKRIKEVRDLMEKM--------VNDSNLFHDQ----GRIEEAKELVNQMSQMGC 335
           +  LCK+KR+ E   ++++M        +    +  D+    G+ + AK + N+M+  G 
Sbjct: 641 LHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH 700

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA-- 393
            P   TYT  +N +C+ G L+ A+ ++ +M   G  P+ V+Y   ++G  H G    A  
Sbjct: 701 KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFS 760

Query: 394 --REMINTS-EEEWWT-------------------------------------------- 406
             + M+  S E  +WT                                            
Sbjct: 761 TLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHG 820

Query: 407 --PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P   TYS ++ G  + G+L EAC ++  M  KG  P      LLI+  C     + A 
Sbjct: 821 LNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKAL 880

Query: 465 KF---MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            F   M EC   G    + ++  L+ G C +GD E+  SL  D+     + D V +  + 
Sbjct: 881 SFVSIMSEC---GFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 937

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           D L K G V+   +++  M  +    +  TY  V ++  +V
Sbjct: 938 DGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKMHEV 978



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 146/322 (45%), Gaps = 7/322 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++L  L K K    A  +L  M+ RGI+C   A++ L+    R GK  +A  + 
Sbjct: 633 DSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMY 692

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M  +   P+       I+      +L  A   + +M+  G+ P+V+TYN LI G   +
Sbjct: 693 NEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHM 752

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             I  A   +  M    C P+  +Y  ++ +L K   +  VR +      D++   +   
Sbjct: 753 GYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSV------DTSGMWNLIE 805

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++   +L+ +M + G  P V TY++++ GFC+ G L++A  +L  M   G  PN   YT 
Sbjct: 806 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +   C      +A   ++   E  + P   +Y +++ GL  EG   +   +  ++++ G
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 925

Query: 440 FFPTPVEINLLIQSLCREGKMD 461
           +    V   +L   L + G +D
Sbjct: 926 YNHDEVAWKILNDGLLKAGYVD 947


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 162/645 (25%), Positives = 291/645 (45%), Gaps = 64/645 (9%)

Query: 95  LEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIV---YYMMLEIL 151
           L G L  L R+  P   C    +     +A++ F   DR    RH P     Y ++++  
Sbjct: 133 LNGILAALARA-PPSAACGDAPA-----LAIELFKRMDRWACPRHSPPTIHTYNILIDCY 186

Query: 152 SKTKLCQGAKRVLRLMARRGIECRPEAFSY-LMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
            +         ++  + + G+   P+ FSY L+  + + G++  A  +   M +  V P 
Sbjct: 187 RRVHRPDLGLAIVGRLLKNGLG--PDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPK 244

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           +LICN+ I  L    ++ KA   +++M  +GI P++ TY+ +I G C    +  A ++++
Sbjct: 245 ILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLE 304

Query: 271 EMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLME-------KMVNDSNLF----HDQG 318
           +M   G  P+ ++Y +++ GY       + VR   +         V++ N F       G
Sbjct: 305 QMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHG 364

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTA---------------------------------- 344
           R  EAK + + M   G  PD+++Y+                                   
Sbjct: 365 RTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHV 424

Query: 345 ---VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
              ++N + R G +D+A  + + M + G  P+TV++   ++ LC  G+  +A    N   
Sbjct: 425 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 484

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE-INLLIQSLCREGKM 460
           +    P+   Y  ++ G    G+L +A +++ EM+ K   P  V+  + +I +LC+EG++
Sbjct: 485 DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRV 544

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
              K  M   +  G   NVV F SL+ G+C  G++EEA +LLD M     +P+   Y T+
Sbjct: 545 AEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 604

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           +D   KNGR+++A  +   ML KG+ PT V Y  ++H   Q  R     K+  +M+    
Sbjct: 605 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGT 664

Query: 581 CRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
             +   Y  V+  LC     +EA  +L K+     K D  T ++++ +    G    A +
Sbjct: 665 TVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKE 724

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +   +    L+P+++    +   LI E   EEAD L +   + GH
Sbjct: 725 LFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 769



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 168/380 (44%), Gaps = 13/380 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  ++  L +      A      M   G+      +  L+      G+L  A  ++
Sbjct: 456 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 515

Query: 200 S-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           S MM K    P +   ++ I+ L    ++A+    ++ M   G  PNV+T+N L++GYC 
Sbjct: 516 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 575

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMVNDSNLF 314
           +  +++A  L+D M   G  P+   Y T++   CK  RI +     RD++ K V  +++ 
Sbjct: 576 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 635

Query: 315 HD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
           +           R   AK++ ++M + G    + TY  V+ G CR    D+A  +L++++
Sbjct: 636 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 695

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
               K + +++   ++ +   G+  EA+E+ +        PN  TYS+++  L +E    
Sbjct: 696 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 755

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA ++   + K G       +N +++ L  + ++  A  ++         +     + L 
Sbjct: 756 EADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLA 815

Query: 487 RGFCQKGDLEEALSLLDDMY 506
             F ++G   E + LL   Y
Sbjct: 816 SLFSREGKYREHIKLLPAKY 835


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 244/528 (46%), Gaps = 28/528 (5%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           H P +   +++IL +  L  G  R             P  F  L+   +  G L +A+  
Sbjct: 106 HRPHLAASLVDILHRAALALGPHR----------SALPSVFDTLLSLLADHGLLDDAVRA 155

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L+ +++  V PN   CN  +  L    +     R  E +      PNV T+N +I   C 
Sbjct: 156 LARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLP----APNVFTFNIVIDFLCK 211

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
              + +A  L   M   GCSPD V+Y +++    K   ++EV  L+ +M           
Sbjct: 212 QGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVT 271

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                N F   G IE+A     +M ++G + +VVT +  V+ FC+ G + +A K+  QM 
Sbjct: 272 YNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMR 331

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  PN  +YT+ ++G C  G+  +A  +++    +   PN +TY+V++ GL +EGK++
Sbjct: 332 VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVA 391

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
            A DV+  M + G     +    LI         + A   + E  NKG  ++V  + +LI
Sbjct: 392 VADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLI 451

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C+   L+EA SLL  M  C   P+TV YTTI+DA  K G+  EA  L+ K+   GL 
Sbjct: 452 WGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQ 511

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKI 604
           P VVTY  +I   C+ G + + +   +KM  L        Y  +I+  C  G L +A  +
Sbjct: 512 PNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHL 571

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           + +++      D      L++ ++ +G    A+ +  +M    L  DL
Sbjct: 572 MNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDL 619



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 217/450 (48%), Gaps = 12/450 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++   K    +  + ++  M + G       ++ L+  +S+ G +  A    
Sbjct: 233 DVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYF 292

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++  V  N++  +T +        + +A++   +M++ G+ PN  TY  L+ G C  
Sbjct: 293 GEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKA 352

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK---EVRDLMEKMVNDSN---- 312
            R+ DAI L+DEM  +G  P+ V+Y  ++  LCKE ++    +V  LME+    +N    
Sbjct: 353 GRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLY 412

Query: 313 --LFHDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
             L H        E A +L+N+M   G   DV  Y  ++ G C+V +LD+AK +L +M  
Sbjct: 413 TTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDD 472

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G +PNTV YT  ++     GK  EA  +++   +    PN +TY  ++ GL + G + E
Sbjct: 473 CGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYE 532

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A     +M + G  P       LI   C+ G +  A   M E ++KG +++ V +TSLI 
Sbjct: 533 AISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLID 592

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G  ++GDL+ A +L   M       D   YT  I        ++EA  ++ +M+  G+ P
Sbjct: 593 GHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITP 652

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
               Y  +I +Y ++G +E+   L  +M S
Sbjct: 653 DKTAYNCLIRKYQKLGNMEEASSLQNEMES 682



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/228 (17%), Positives = 89/228 (39%), Gaps = 23/228 (10%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + ++Y  +++   K      A  +L  +   G++     +  L+    +AG +  A+ 
Sbjct: 476 RPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAIS 535

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
               M++  + PN+ +  T I        L+KA+  +  M   G++ + + Y  LI G+ 
Sbjct: 536 HFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHM 595

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               ++ A  L  +M   G   D   Y   +   C    ++E R ++ +M+         
Sbjct: 596 KQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGT------- 648

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                           G  PD   Y  ++  + ++G +++A  +  +M
Sbjct: 649 ----------------GITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680



 Score = 39.7 bits (91), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 33/171 (19%)

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P+  T+  +ID L K G + EA  L ++M + G  P VVTY ++I  Y            
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGY------------ 244

Query: 572 LEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
                   KC              G LEE   ++ ++ ++   AD  T + L+  +   G
Sbjct: 245 -------GKC--------------GELEEVELLVSEMRKSGCAADVVTYNALINCFSKFG 283

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
               AY     M    ++ ++       +    EG   EA  L  +   RG
Sbjct: 284 WIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRG 334


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 149/575 (25%), Positives = 264/575 (45%), Gaps = 46/575 (8%)

Query: 99  LRNLLRSLKPRQICAVL-RSQADERVALQFFYWADRQW-RYRHDPIVYYMMLEILSKT-K 155
           +RN L  L P  +  VL R + D  +  +F       +  ++H  +    M+ IL ++ +
Sbjct: 59  VRNHLIRLNPLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGR 118

Query: 156 LCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG-----------------KLRNAMYV 198
           L      VLR++ R G+  R E  + L+  YS  G                 KLR A   
Sbjct: 119 LSDAQSCVLRMIRRSGVS-RVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEA 177

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
            ++++      ++  CN  I  LV    +  A R  + +  +G+  NV T N ++   C 
Sbjct: 178 FTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCK 237

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
             +++     + E+  KG  PD V+Y T++                       + +  QG
Sbjct: 238 DGKMEKVGTFLSEVQEKGVYPDIVTYNTLI-----------------------SAYSSQG 274

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
            +EEA EL++ M   G  P V TY  V+NG C+ G+ ++AK++  +M   G  P++ +Y 
Sbjct: 275 LMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 334

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           + L   C  G ++E   + +        P+ + +S +M    R G L +A      + + 
Sbjct: 335 SLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 394

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  V   +LIQ  CR+G +  A     E L +GCA++VV + +++ G C++  L EA
Sbjct: 395 GLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 454

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             L ++M      PD+ T T +ID   K G ++ A EL  KM  K +   VVTY T++  
Sbjct: 455 DKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDG 514

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           + +VG ++   ++   M+SK+   T  +++ ++  LCS G+L EA ++  +++  + K  
Sbjct: 515 FGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPT 574

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              C+ +++ Y   G          +M +   +PD
Sbjct: 575 VMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPD 609



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 238/511 (46%), Gaps = 16/511 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+ + ++R G+       + ++ A  + GK+      LS +Q+  V P+++  NT I 
Sbjct: 209 AWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLIS 268

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A   +  M   G +P V TYN +I G C   + + A ++  EM   G SP
Sbjct: 269 AYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 328

Query: 280 DKVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSN---LFHDQGRIEEAKELV 327
           D  +Y +++   CK+    E          RD++  +V  S+   LF   G +++A    
Sbjct: 329 DSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 388

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           N + + G IPD V YT ++ G+CR G + +A  +  +M   GC  + V+Y   L+GLC  
Sbjct: 389 NSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 448

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
               EA ++ N   E    P++ T ++++ G  + G L  A ++ ++M +K      V  
Sbjct: 449 KMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTY 508

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N L+    + G +D AK+   + ++K      ++F+ L+   C KG L EA  + D+M  
Sbjct: 509 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMIS 568

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P  +   ++I    ++G   +    + KM+S+G VP  ++Y T+I+ + +   +  
Sbjct: 569 KSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSK 628

Query: 568 LLKLLEKMLSKQKCRT----AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
              L++KM  KQ         YN ++   C    ++EA  +L K++      D ST   L
Sbjct: 629 AFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSL 688

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
           +  ++++     A++    M  R   PD K 
Sbjct: 689 INGFVSQDNLTEAFRFHDEMLQRGFSPDDKF 719



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 23/270 (8%)

Query: 141 PIVYYMMLEILSKTKL--CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           P  Y + + I    KL   Q A  + + M  + I+     ++ L+  + + G +  A  +
Sbjct: 468 PDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEI 527

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
            + M    + P  +  +  ++ L     L++A R  + M    I P V+  N +IKGYC 
Sbjct: 528 WADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCR 587

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
                D    +++M  +G  PD +SY T++    KE+ + +   L++KM           
Sbjct: 588 SGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKM----------- 636

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
                     +  Q G +PDV TY ++++GFCR  ++ +A+ +L++M   G  P+  +YT
Sbjct: 637 ----------EEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYT 686

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
           + +NG        EA    +   +  ++P+
Sbjct: 687 SLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 137/290 (47%), Gaps = 24/290 (8%)

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI------------------NLL 450
           +++ S ++H L R G+LS+A   V  M+++    + VEI                  +LL
Sbjct: 103 SLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGV-SRVEIVNSLVSTYSNCGSNDSVFDLL 161

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I++  +  K+  A +      +KG  V++    +LI    + G +E A  +  ++     
Sbjct: 162 IRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGV 221

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
             +  T   +++AL K+G++E+    + ++  KG+ P +VTY T+I  Y   G +E+  +
Sbjct: 222 GVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFE 281

Query: 571 LLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           L+  M SK        YN VI  LC  G  E A ++  ++LR+    D++T   L+    
Sbjct: 282 LMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 341

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
            KG  +    +   M +R+++PDL +C   S  + L  +S   D  ++ F
Sbjct: 342 KKGDAVETENIFSDMRSRDVVPDL-VC--FSSMMSLFTRSGNLDKALMYF 388


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 226/462 (48%), Gaps = 30/462 (6%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL---ICNTAIHVLVVGNKLAKALRFL 234
           A++  +    ++GK+  A      MQ++  +        C++ I  L    ++  AL  L
Sbjct: 13  AWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLL 72

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM--PLKGCSPDKVSYYTVMGYLC 292
           E M   G  P++ T++ LI   C   +I++A + +  M   +   +    SY +++  LC
Sbjct: 73  ETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLC 132

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           K K++ +   +   MV++ ++                      +PDVV+Y+ +++GFC++
Sbjct: 133 KAKKVHQAFAIFSTMVSERSV----------------------VPDVVSYSILIDGFCKI 170

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
            EL +A+K+ +QM    C PN  +Y AFLNGL   G+  +A+ +         +P+ ITY
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITY 230

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           S ++HG     K  +A ++   M+ +G  P  V  N L+  LC+E K D A +  ++ + 
Sbjct: 231 STLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +GC  + V +T+L+ GFC  G +E+A+ + D+M     DPD V Y  ++    + G+  E
Sbjct: 291 RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGE 350

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVI 589
           A +L   M+S+   P  V++  +I    +  R++D +++ E+M     C      YN +I
Sbjct: 351 ARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
             LC    L EA K+  ++ R     D    +VL+E+    G
Sbjct: 411 FGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 178/379 (46%), Gaps = 41/379 (10%)

Query: 83  RLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPI 142
           R I  R++        L +L ++ K  Q  A+  +   ER  +              D +
Sbjct: 112 RTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVP-------------DVV 158

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
            Y ++++   K      A+++ + M    + C P   +Y   +    R G++ +A  V  
Sbjct: 159 SYSILIDGFCKIDELGRAEKLYKQMI--DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYE 216

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M  A  +P+++  +T IH   +  K  +A    E M   G  PN +TYNCL+ G C   
Sbjct: 217 EMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKES 276

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
           +  +A +L  +M  +GC PDKV+Y T++   C                       + G+I
Sbjct: 277 KPDEAHELFRKMVERGCDPDKVTYTTLLYGFC-----------------------NVGKI 313

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           E+A E+ ++M   G  PDVV Y  ++ GF R G+  +A+++ Q M    CKP+TVS+   
Sbjct: 314 EQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIM 373

Query: 381 LNGLCHNGKSLEAREMINTSEEEWW-TPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
           ++GL    +  +A E+    E++   +P+ +TY+ ++ GL  E +LSEA  V +E+ +  
Sbjct: 374 IDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLK 433

Query: 440 FFPTPVEINLLIQSLCREG 458
             P P   N+L++++   G
Sbjct: 434 LSPDPHAFNVLLEAMYAAG 452



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 157/363 (43%), Gaps = 46/363 (12%)

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI---TYSVVMHGLRREGKLSEAC 429
           N V++TAFL GLC +GK  +A E   T +E   +       T   V+  L + G++  A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ-----------------ECLN 472
            ++  M+K+G+ P     ++LI  LC+  K+  A++F+Q                   LN
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 473 KGCAV---------------------NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             C                       +VV+++ LI GFC+  +L  A  L   M      
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P+  TY   ++ L + GR+ +A  +  +M+S G  P V+TY T+IH +    + +   +L
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 572 LEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
            E M+S+  CR     YN ++  LC     +EA ++  K++      D  T   L+  + 
Sbjct: 250 FEAMISR-GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           N G    A +V   M ++   PD+     + +     GK  EA  L    V R   +P +
Sbjct: 309 NVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR-ECKPDT 367

Query: 689 EEH 691
             H
Sbjct: 368 VSH 370



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/373 (21%), Positives = 170/373 (45%), Gaps = 48/373 (12%)

Query: 340 VTYTAVVNGFCRVGELDQAK---KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           V +TA + G C+ G+++QA    + +Q+       P++ +  + +  LC  G+   A  +
Sbjct: 12  VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM--------------------- 435
           + T  +  + P+  T+S++++ L +  K+ EA + ++ M                     
Sbjct: 72  LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSL 131

Query: 436 -----VKKGF------------FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
                V + F             P  V  ++LI   C+  ++  A+K  ++ ++  C  N
Sbjct: 132 CKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPN 191

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           V  + + + G  +KG + +A  + ++M      PD +TY+T+I   S   + ++A EL  
Sbjct: 192 VTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFE 251

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
            M+S+G  P  VTY  ++H  C+  + ++  +L  KM+ +     +  Y  ++   C+ G
Sbjct: 252 AMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVG 311

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            +E+A ++  +++      D    + L++ +   G P  A ++   M +R   PD     
Sbjct: 312 KIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPD----- 366

Query: 657 KVSERLILEGKSE 669
            VS  ++++G S+
Sbjct: 367 TVSHNIMIDGLSK 379



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 98/214 (45%), Gaps = 8/214 (3%)

Query: 477 VNVVNFTSLIRGFCQKGDLE---EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           +N V +T+ + G C+ G +E   EA   + +     + P + T  ++I  L K GRV+ A
Sbjct: 9   LNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSA 68

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT----AYNQVI 589
             L+  M+ +G  P + T+  +I+  C+  ++++  + L+ M      R     +YN ++
Sbjct: 69  LSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLL 128

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKA-DASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
            +LC    + +A  I   ++   S   D  +  +L++ +        A K+  +M + N 
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +P++         L+ +G+  +A  +    +  G
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAG 222


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 245/510 (48%), Gaps = 26/510 (5%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A+  F    R  R R   I +  +  ++++TK       + + M  +GI       S ++
Sbjct: 56  AVDLFQEMTRS-RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
               R  KL  A   +  + K    P+ +  +T I+ L +  ++++AL  ++RM   G  
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P ++T N L+ G C   ++ DA+ LID M   G  P++V+Y  V+  +CK          
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK---------- 224

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                         G+   A EL+ +M +     D V Y+ +++G C+ G LD A  +  
Sbjct: 225 -------------SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   G K + + YT  + G C+ G+  +  +++    +   TP+ + +S ++    +EG
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           KL EA ++ +EM+++G  P  V    LI   C+E ++D A   +   ++KGC  N+  F 
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            LI G+C+   +++ L L   M L     DTVTY T+I    + G++E A EL  +M+S+
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-LSKQKCRTA-YNQVIENLCSFGYLEEA 601
            + P +V+Y+ ++   C  G  E  L++ EK+  SK +     YN +I  +C+   +++A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKG 631
             +   +     K D  T ++++     KG
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 252/504 (50%), Gaps = 14/504 (2%)

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
           +A+ +   M ++   P L+  +    V+    +    L   ++M+L GI  N+ T + +I
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-- 311
              C   ++  A   + ++   G  PD V++ T++  LC E R+ E  +L+++MV     
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 312 ----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                     N     G++ +A  L+++M + G  P+ VTY  V+   C+ G+   A ++
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L++M     K + V Y+  ++GLC +G    A  + N  E + +  + I Y+ ++ G   
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            G+  +   ++R+M+K+   P  V  + LI    +EGK+  A++  +E + +G + + V 
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +TSLI GFC++  L++A  +LD M      P+  T+  +I+   K   +++  EL  KM 
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLE 599
            +G+V   VTY T+I  +C++G++E   +L ++M+S++      +Y  +++ LC  G  E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           +A +I  K+ ++  + D    ++++    N      A+ + C +  + + PD+K    + 
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534

Query: 660 ERLILEGKSEEADTLMLRFVERGH 683
             L  +G   EAD L  +  E GH
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGH 558



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 207/418 (49%), Gaps = 16/418 (3%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           ++ + + Y  +L+++ K+     A  +LR M  R I+     +S ++    + G L NA 
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            + + M+      +++I  T I       +     + L  M    ITP+V+ ++ LI  +
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
               ++++A +L  EM  +G SPD V+Y +++   CKE ++ +   +++ MV+       
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  N +     I++  EL  +MS  G + D VTY  ++ GFC +G+L+ AK++ Q+
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M     +P+ VSY   L+GLC NG+  +A E+    E+     +   Y++++HG+    K
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + +A D+   +  KG  P     N++I  LC++G +  A    ++    G + N   +  
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           LIR    +GD  ++  L++++  C    D  T   ++D LS +GR++++    + MLS
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS-DGRLKKS---FLDMLS 621



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 130/302 (43%), Gaps = 38/302 (12%)

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           K  +A D+ +EM +    P  ++ + L   + R  + D      ++   KG A N+   +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            +I   C+   L  A S +  +     +PDTVT++T+I+ L   GRV EA EL+ +M+  
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS--------------KQKCRTA----- 584
           G  PT++T   +++  C  G+V D + L+++M+               K  C++      
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 585 ------------------YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
                             Y+ +I+ LC  G L+ A  +  ++     KAD      L+  
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           +   G      K+   M  R + PD+     + +  + EGK  EA+ L    ++RG I P
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG-ISP 350

Query: 687 KS 688
            +
Sbjct: 351 DT 352



 Score = 43.5 bits (101), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 72/169 (42%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R R D + Y ++L+ L      + A  +   + +  +E     ++ ++     A K+ +A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +   +    V P++   N  I  L     L++A     +M+  G +PN  TYN LI+ 
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           +        + KLI+E+   G S D  +   V+  L   +  K   D++
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDML 620


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 230/496 (46%), Gaps = 52/496 (10%)

Query: 176 PEAFSYLMVAYSRA--GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P A++Y  +  S    G + +A+ VL  M     A    +C+  +     G     A+R 
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           L+ +   G T +    N ++   C+   + + ++L+ ++P  GC PD VSY  V+  LC 
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 294 EKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
            KR  +V +LM +MV          R+ EA   ++QM + GC PD+  Y  +++G C+ G
Sbjct: 226 AKRWDDVEELMVEMV----------RVHEA---LSQMPEHGCTPDLRMYATIIDGICKDG 272

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL----------------------------- 384
             + A  +L +M  +G KPN V Y   L GL                             
Sbjct: 273 HHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFN 332

Query: 385 ------CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
                 C NG      E++    E    P+ ITY+ V++G  +EG + EA  +++ M   
Sbjct: 333 ILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSAC 392

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  +   ++++ LCR  +   A++ +   + +GC  N V F +LI   C+KG  E+A
Sbjct: 393 GCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQA 452

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           + LL  M +    PD ++Y+T+ID L K G+ EEA EL+  M++KG+ P  + Y ++   
Sbjct: 453 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASA 512

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
             + GR + ++++ + +        A  YN VI +LC     + A      ++      +
Sbjct: 513 LSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 572

Query: 617 ASTCHVLVESYLNKGI 632
            ST  +L+    ++G+
Sbjct: 573 ESTYTILIRGLASEGL 588



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 227/496 (45%), Gaps = 57/496 (11%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y+ ++  L    L   A  VL  M  RG    P     ++ A  R G  R+A+  L ++ 
Sbjct: 111 YFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLH 170

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
                 +   CN  +  +     + + +  L ++   G  P++++YN ++KG C   R  
Sbjct: 171 AKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWD 230

Query: 264 DAIKL----------IDEMPLKGCSPD--------------------------------- 280
           D  +L          + +MP  GC+PD                                 
Sbjct: 231 DVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLK 290

Query: 281 --KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKEL 326
              V Y TV+  LC  +R +E  DL+ +M  +             + F   G ++   EL
Sbjct: 291 PNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIEL 350

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           + QM + GCIPDV+TYT V+NGFC+ G +D+A  +L+ M   GCKPNT+SYT  L GLC 
Sbjct: 351 LEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCR 410

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
             + ++A+E+I+   ++   PN +T++ +++ + ++G   +A +++++M+  G  P  + 
Sbjct: 411 AERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLIS 470

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            + +I  L + GK + A + +   +NKG   N + ++S+     ++G  ++ + + D + 
Sbjct: 471 YSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQ 530

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                 D   Y  +I +L K    + A +    M+S G +P   TY  +I      G V 
Sbjct: 531 DATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVR 590

Query: 567 DLLKLLEKMLSKQKCR 582
           +   LL ++ S++  R
Sbjct: 591 EAQDLLSELCSRRAVR 606



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 202/389 (51%), Gaps = 26/389 (6%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + PN  TY  +++  C    I DA+ ++DEMPL+GC+      + ++   C+    +   
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 302 DLMEKM--------VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
             ++ +          + NL      +QG ++E  EL+ ++   GC PD+V+Y AV+ G 
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 350 CRVGELDQAKKM----------LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           C     D  +++          L QM  HGC P+   Y   ++G+C +G    A ++++ 
Sbjct: 224 CMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSR 283

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
                  PN + Y+ V+ GL    +  EA D++ EM ++      V  N+L+   C+ G 
Sbjct: 284 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 343

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +D   + +++ L  GC  +V+ +T++I GFC++G ++EA+ LL +M  C   P+T++YT 
Sbjct: 344 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 403

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           ++  L +  R  +A EL+  M+ +G +P  VT+ T+I+  C+ G  E  ++LL++ML   
Sbjct: 404 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLV-N 462

Query: 580 KCRT---AYNQVIENLCSFGYLEEAGKIL 605
            C     +Y+ VI+ L   G  EEA ++L
Sbjct: 463 GCSPDLISYSTVIDGLGKAGKTEEALELL 491



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 153/345 (44%), Gaps = 18/345 (5%)

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           +A++   C  G    A + L      G     V+Y A + G C  G+   AR +      
Sbjct: 48  SALIRSLCAAGRTADAARALDTA---GDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP- 103

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               PNA TY  ++  L   G +++A  V+ EM  +G   TP   ++++++ CR G    
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A + +Q    KGC ++  N   ++   C++G ++E + LL  +     +PD V+Y  ++ 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 523 ALSKNGRVEEATELMMKML----------SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
            L    R ++  ELM++M+            G  P +  Y T+I   C+ G  E    +L
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281

Query: 573 EKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
            +M S   +     YN V++ LCS    EEA  +L ++ +     D  T ++LV+ +   
Sbjct: 282 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 341

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           G+     ++  +M     IPD+     V      EG  +EA  L+
Sbjct: 342 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLL 386



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 128/301 (42%), Gaps = 27/301 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + + ++++   +  L      +L  M   G  C P+  +Y  V   + + G +  A+ 
Sbjct: 327 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHG--CIPDVITYTTVINGFCKEGLVDEAVM 384

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M      PN +     +  L    +   A   +  M   G  PN +T+N LI   C
Sbjct: 385 LLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMC 444

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
                + AI+L+ +M + GCSPD +SY TV+  L K                        
Sbjct: 445 KKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGK-----------------------A 481

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G+ EEA EL+N M   G  P+ + Y+++ +   R G  D+  +M   +     + +   Y
Sbjct: 482 GKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALY 541

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
            A ++ LC   ++  A +           PN  TY++++ GL  EG + EA D++ E+  
Sbjct: 542 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCS 601

Query: 438 K 438
           +
Sbjct: 602 R 602



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 12/188 (6%)

Query: 130 WADRQWRYRH--------DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           W D Q    H        +P+ +  ++  + K  L + A  +L+ M   G  C P+  SY
Sbjct: 414 WVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG--CSPDLISY 471

Query: 182 LMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
             V     +AGK   A+ +L++M    + PN +I ++    L    +  K ++  + +Q 
Sbjct: 472 STVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQD 531

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
           A +  +   YN +I   C       AI     M   GC P++ +Y  ++  L  E  ++E
Sbjct: 532 ATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVRE 591

Query: 300 VRDLMEKM 307
            +DL+ ++
Sbjct: 592 AQDLLSEL 599


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/498 (29%), Positives = 252/498 (50%), Gaps = 39/498 (7%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L +A  VL  + KA+ A + +  NT +        L  A R +E  + +G T NV+TY 
Sbjct: 131 RLADAERVLEAL-KASGAADAVSHNTLVAGYCRDGSLGDAERVVEAARASG-TANVVTYT 188

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI GYC   R+ DA++LI  MP+   +PD  +Y TV+  LC  K+ ++  +LM +M+ +
Sbjct: 189 ALIDGYCRSGRLADALRLIASMPV---APDTYTYNTVLKGLCCAKQWEQAEELMREMIRN 245

Query: 311 S------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
           S              F   G ++ A EL+ QM + GC PDV+ Y+ +VNGF   G +D+A
Sbjct: 246 SCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEA 305

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            K+L  M    C+PNTV Y A L GLC  G+  E  E+I     +   PN  T+S +++ 
Sbjct: 306 LKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINS 362

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L +   +  A +V+ +M K G+ P  V  N +I     + + D A K ++  L   C  +
Sbjct: 363 LCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPD 419

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATEL 536
            ++F ++++  C+     +A+ L+  M   KKD   + +T+  +ID+L +NG+V++A E+
Sbjct: 420 TISFNAVLKCLCKAKRWYDAVELVAKML--KKDCRINEMTFNILIDSLCQNGQVKDAIEV 477

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLC 593
              M     +P +VTY ++I+ + + G  E    L   M     CR    +YN  ++ LC
Sbjct: 478 FELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM----PCRADIFSYNATLKGLC 533

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
                ++AG+++  ++      +  T ++L+ S   KG+   A  V  +M    + PD+ 
Sbjct: 534 MAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDI- 592

Query: 654 LCKKVSERLILEGKSEEA 671
                +   ++ G SE+ 
Sbjct: 593 ----FTYNALINGYSEQG 606



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 233/462 (50%), Gaps = 26/462 (5%)

Query: 163 VLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
            LRL+A   +   P+ ++Y  ++     A +   A  ++  M + +  PN +   T I  
Sbjct: 203 ALRLIASMPVA--PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRA 260

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
                 L +A+  LE+M   G TP+V+ Y+ L+ G+ +  R+ +A+KL++ M    C P+
Sbjct: 261 FCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPN 317

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMV------ND---SNLFHD--QGR-IEEAKELVN 328
            V Y   +  LC   R +EV +L+ +MV      ND   S L +   Q R +E A E++ 
Sbjct: 318 TVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLE 377

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           QM + G +PDVV+Y  +++ F      D A K+L+ M    CKP+T+S+ A L  LC   
Sbjct: 378 QMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAK 434

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  +A E++    ++    N +T+++++  L + G++ +A +V   M K    P  V  +
Sbjct: 435 RWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYS 494

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            LI     +G  + A    +   +  C  ++ ++ + ++G C     ++A  L+ DM   
Sbjct: 495 SLINGFSEQGLDEMAFDLFR---SMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTE 551

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P+ VT+  +I +L + G V  A ++  +M   G+ P + TY  +I+ Y + GR++D 
Sbjct: 552 DCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA 611

Query: 569 LKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           LK L  M  +     +YN +++ LC     ++A K++ ++LR
Sbjct: 612 LKFLSTMPCEPD-TISYNSILKGLCRAERWKDAEKLVTEMLR 652



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 217/458 (47%), Gaps = 53/458 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  +L+ L   K  + A+ ++R M R         F+  + A+ + G L  A+ +L
Sbjct: 215 DTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELL 274

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M K    P+++I +T ++      ++ +AL+ L  M      PN + YN  +KG C  
Sbjct: 275 EQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIA 331

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------ 313
            R ++  +LI EM  K C P+  ++ T++  LC+ + ++   +++E+M     +      
Sbjct: 332 GRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSY 391

Query: 314 ------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                 F DQ R ++A +L   +  M C PD +++ AV+   C+      A +++ +M  
Sbjct: 392 NTIISCFSDQARADDALKL---LKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLK 448

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG---- 423
             C+ N +++   ++ LC NG+  +A E+     +    P+ +TYS +++G   +G    
Sbjct: 449 KDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEM 508

Query: 424 ----------------------------KLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
                                       +  +A +++ +MV +   P  V  N+LI SLC
Sbjct: 509 AFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLC 568

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           ++G ++ A    ++    G   ++  + +LI G+ ++G L++AL  L  M     +PDT+
Sbjct: 569 QKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTI 625

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           +Y +I+  L +  R ++A +L+ +ML K   P  VT++
Sbjct: 626 SYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFK 663



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 233/515 (45%), Gaps = 49/515 (9%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           RL A      R E +     A  R G       V S+    +  P   + +  +  LV  
Sbjct: 31  RLSAVVAASTRREGYRSRTTAPGRRGD----GGVGSIWVNPSAPPRPGVASRTLRRLVEL 86

Query: 225 NKLAKALRFL--------ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
           + L  ALR L             A   P V++ N LIK  C   R+ DA ++++ +   G
Sbjct: 87  DNLDAALRLLLGGPSSTPATSDSAPEPPAVISCNILIKKLCARRRLADAERVLEALKASG 146

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI 336
            + D VS+ T++   C++                       G + +A+ +V      G  
Sbjct: 147 AA-DAVSHNTLVAGYCRD-----------------------GSLGDAERVVEAARASG-T 181

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
            +VVTYTA+++G+CR G L  A +++  M      P+T +Y   L GLC   +  +A E+
Sbjct: 182 ANVVTYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKGLCCAKQWEQAEEL 238

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +         PN +T++  +    + G L  A +++ +M K G  P  +  + L+     
Sbjct: 239 MREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSE 298

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            G++D A K +   L   C  N V + + ++G C  G  EE   L+ +M      P+  T
Sbjct: 299 HGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDAT 355

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           ++T+I++L +N  VE A E++ +M   G +P VV+Y T+I  +    R +D LKLL+ ML
Sbjct: 356 FSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML 415

Query: 577 SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
            K     ++N V++ LC      +A +++ K+L+   + +  T ++L++S    G    A
Sbjct: 416 CKPD-TISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDA 474

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
            +V   M     +PD+     V+   ++ G SE+ 
Sbjct: 475 IEVFELMPKYRCMPDI-----VTYSSLINGFSEQG 504



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 135/294 (45%), Gaps = 25/294 (8%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           +++ Y  D + Y  ++   S       A ++L+ M      C+P+  S+  ++    +A 
Sbjct: 380 QKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML-----CKPDTISFNAVLKCLCKAK 434

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +  +A+ +++ M K     N +  N  I  L    ++  A+   E M      P+++TY+
Sbjct: 435 RWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYS 494

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI G+ +    + A  L   MP   C  D  SY   +  LC   R  +  +L+  MV +
Sbjct: 495 SLINGFSEQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTE 551

Query: 311 SNLFHD------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
             L ++            +G +  A ++  QM + G  PD+ TY A++NG+   G LD A
Sbjct: 552 DCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA 611

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
            K L  M    C+P+T+SY + L GLC   +  +A +++     +  TPN +T+
Sbjct: 612 LKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 93/197 (47%), Gaps = 3/197 (1%)

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           V++   LI+  C +  L +A  +L+ +       D V++ T++    ++G + +A  ++ 
Sbjct: 116 VISCNILIKKLCARRRLADAERVLEALK-ASGAADAVSHNTLVAGYCRDGSLGDAERVVE 174

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYL 598
              + G    VVTY  +I  YC+ GR+ D L+L+  M       T YN V++ LC     
Sbjct: 175 AARASGTA-NVVTYTALIDGYCRSGRLADALRLIASMPVAPDTYT-YNTVLKGLCCAKQW 232

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           E+A +++ +++R +   +  T    + ++   G+   A ++  +M      PD+ +   +
Sbjct: 233 EQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTL 292

Query: 659 SERLILEGKSEEADTLM 675
                  G+ +EA  L+
Sbjct: 293 VNGFSEHGRVDEALKLL 309


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 153/579 (26%), Positives = 262/579 (45%), Gaps = 57/579 (9%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
            +L  L K    + +  V   +   GI      FS ++ A+ +  +  +A+ + S M+K 
Sbjct: 226 FLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKL 285

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRF-------------------------------- 233
            VAPN++  N  IH L    +L +A RF                                
Sbjct: 286 GVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEA 345

Query: 234 ---LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
              L+ M   G  PN + YN LI GYC +  I +A+K+ D+M  KG SP+ V+  +++  
Sbjct: 346 NCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQG 405

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQG-------------RIEEAKELVNQMSQMGCIP 337
            CK  +I +  +++E+M+    L  +QG             R   A   + +M      P
Sbjct: 406 FCKSDQIGQAENVLEEMIG-RGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRP 464

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           +    T +V+G C+ G+  +A ++  ++   G  PN V+  A ++GLC  G   E  +++
Sbjct: 465 NDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLL 524

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
               E     + ITY+ ++ G  +EGK+ E  ++  EMVKKG  P     NLL+  LC  
Sbjct: 525 RDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNA 584

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
            K+D A +   EC   G   NV  +  +I G+C+   +EE  +LL+++   K + ++V Y
Sbjct: 585 DKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVY 644

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-- 575
            ++I A   NG +  A  L   M S+G++ +  TY +++H  C +G V+D   LL++M  
Sbjct: 645 NSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRK 704

Query: 576 ---LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
              L    C   Y  +I      G + +   +L ++       +  T  ++++ +   G 
Sbjct: 705 EGLLPNVVC---YTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGK 761

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
              A K+   M  + ++PD       +  L  EGK EEA
Sbjct: 762 TKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEA 800



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 258/547 (47%), Gaps = 39/547 (7%)

Query: 92  SPKLE-GELRNLLRSLKPRQICA---VLRSQADERVALQFFYWADRQWRYRHDPIVYYMM 147
           +P L+  + + L+  L P++  +    L+S  + + AL FF++     ++R     Y ++
Sbjct: 67  NPSLDCAKCKELVPHLSPQEFDSCFLALKSNVNPKTALNFFHFVSETCKFRFTARSYCVL 126

Query: 148 LEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV 207
           + +L    L   A    RL+  R I+ +  AF Y     SR  ++   M   +++ +  +
Sbjct: 127 IHLLVGNDLLSPA----RLLLIRLIDGKVPAF-YARNFESRHFEIAQIMADFNLVFEPVI 181

Query: 208 APNLLICNTAIHVLVVGNK---LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
              + I +  +HV     K      A      +   G+ P++ T   L+      + +K 
Sbjct: 182 G--VKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKK 239

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAK 324
           + ++ D + L G  PD   + T++   CK  R                        ++A 
Sbjct: 240 SYEVYDFICLGGIIPDVHLFSTMINAFCKGHRE-----------------------DDAI 276

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L ++M ++G  P+VVTY  +++G C+ G LD+A +  ++M      P+ ++Y+ F+NGL
Sbjct: 277 GLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGL 336

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
               K  EA  ++    E  + PN + Y+ ++ G  + G +SEA  +  +M+ KG  P  
Sbjct: 337 IKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNS 396

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V +N LIQ  C+  ++  A+  ++E + +G  +N  +F+ +I   C K     AL  + +
Sbjct: 397 VTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIRE 456

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M L    P+    TT++  L K G+  EA EL  ++L KG VP +VT   +IH  C+ G 
Sbjct: 457 MLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGN 516

Query: 565 VEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           +++ LKLL  ML +     R  YN +I   C  G ++E  ++  ++++   + D  T ++
Sbjct: 517 MQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNL 576

Query: 623 LVESYLN 629
           L+    N
Sbjct: 577 LLHGLCN 583



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/499 (26%), Positives = 240/499 (48%), Gaps = 14/499 (2%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y + +  L K +    A  VL+ M+  G       ++ L+  Y + G +  A+ +   
Sbjct: 327 ITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDD 386

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    ++PN +  N+ I      +++ +A   LE M   G+  N  +++ +I   C   R
Sbjct: 387 MLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFR 446

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL---------MEKMVNDSN 312
              A+  I EM L+   P+     T++  LCK  +  E  +L         +  +V  + 
Sbjct: 447 FVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNA 506

Query: 313 LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L H     G ++E  +L+  M + G + D +TY  +++G C+ G++ +  ++ ++M   G
Sbjct: 507 LIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKG 566

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            +P+  ++   L+GLC+  K  EA  + +  ++  + PN  TY V++ G  +  K+ E  
Sbjct: 567 IQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGE 626

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           +++ E+V K      V  N LI++ C  G M+ A +   +  ++G  ++   ++SL+ G 
Sbjct: 627 NLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGL 686

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C  G +++A  LLD+M      P+ V YTTII   SK G++ +   ++ +M S  + P  
Sbjct: 687 CNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNK 746

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGK 607
            TY  +I  +C++G+ ++  KLL +M  K     A  YN     LC  G +EEA K+  +
Sbjct: 747 FTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDE 806

Query: 608 VLRTASKADASTCHVLVES 626
           +   A   D  T   L++ 
Sbjct: 807 MSSGAVCLDEITYTTLIDG 825


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 162/645 (25%), Positives = 291/645 (45%), Gaps = 64/645 (9%)

Query: 95  LEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIV---YYMMLEIL 151
           L G L  L R+  P   C    +     +A++ F   DR    RH P     Y ++++  
Sbjct: 113 LNGILAALARA-PPSAACGDAPA-----LAIELFKRMDRWACPRHSPPTIHTYNILIDCY 166

Query: 152 SKTKLCQGAKRVLRLMARRGIECRPEAFSY-LMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
            +         ++  + + G+   P+ FSY L+  + + G++  A  +   M +  V P 
Sbjct: 167 RRVHRPDLGLAIVGRLLKNGL--GPDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPK 224

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           +LICN+ I  L    ++ KA   +++M  +GI P++ TY+ +I G C    +  A ++++
Sbjct: 225 ILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLE 284

Query: 271 EMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLME-------KMVNDSNLF----HDQG 318
           +M   G  P+ ++Y +++ GY       + VR   +         V++ N F       G
Sbjct: 285 QMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHG 344

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTA---------------------------------- 344
           R  EAK + + M   G  PD+++Y+                                   
Sbjct: 345 RTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHV 404

Query: 345 ---VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
              ++N + R G +D+A  + + M + G  P+TV++   ++ LC  G+  +A    N   
Sbjct: 405 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 464

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE-INLLIQSLCREGKM 460
           +    P+   Y  ++ G    G+L +A +++ EM+ K   P  V+  + +I +LC+EG++
Sbjct: 465 DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRV 524

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
              K  M   +  G   NVV F SL+ G+C  G++EEA +LLD M     +P+   Y T+
Sbjct: 525 AEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 584

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           +D   KNGR+++A  +   ML KG+ PT V Y  ++H   Q  R     K+  +M+    
Sbjct: 585 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGT 644

Query: 581 CRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
             +   Y  V+  LC     +EA  +L K+     K D  T ++++ +    G    A +
Sbjct: 645 TVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKE 704

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +   +    L+P+++    +   LI E   EEAD L +   + GH
Sbjct: 705 LFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 749



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/548 (24%), Positives = 244/548 (44%), Gaps = 58/548 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y ++++ L K+K    A+RVL  M   G   RP + +Y  L+  YS +G    ++ 
Sbjct: 259 DLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGT--RPNSITYNSLIHGYSISGMWNESVR 316

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   M    V P +  CN+ IH L    +  +A    + M L G  P++++Y+ ++ GY 
Sbjct: 317 VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYA 376

Query: 258 --------DLHRIKD-----------------------------AIKLIDEMPLKGCSPD 280
                   D+H I +                             A+ + ++M  KG  PD
Sbjct: 377 TATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 436

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVN----DSNLFH--------DQGRIEEAKELVN 328
            V++ TV+  LC+  R+ +       MV+     S   +        + G + +AKEL++
Sbjct: 437 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 496

Query: 329 QMSQMGCIPDVVTY-TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           +M      P  V Y ++++N  C+ G + + K ++  M   G +PN V++ + + G C  
Sbjct: 497 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 556

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G   EA  +++        PN   Y  ++ G  + G++ +A  V R+M+ KG  PT V  
Sbjct: 557 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 616

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           ++++  L +  +   AKK   E +  G  V++  +  ++ G C+    +EA  LL+ ++ 
Sbjct: 617 SIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 676

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ---VGR 564
                D +T+  +I A+ K GR +EA EL   + + GLVP + TY  +I    +      
Sbjct: 677 MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 736

Query: 565 VEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
            ++L   +EK       R   N ++  L +   + +A   L  +       +AST  +L 
Sbjct: 737 ADNLFISVEKSGHASDSRL-LNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLA 795

Query: 625 ESYLNKGI 632
             +  +G+
Sbjct: 796 SLFSREGM 803



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 129/296 (43%), Gaps = 12/296 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS ++    + G++     ++ MM +    PN++  N+ +    +   + +A   L+ M 
Sbjct: 511 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 570

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             GI PN   Y  L+ GYC   RI DA+ +  +M  KG  P  V Y  ++  L + +R  
Sbjct: 571 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTT 630

Query: 299 EVRDLMEKMVNDSNL--FHDQGRI----------EEAKELVNQMSQMGCIPDVVTYTAVV 346
             + +  +M+        H  G +          +EA  L+ ++  M    D++T+  V+
Sbjct: 631 AAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 690

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +   +VG   +AK++   +  +G  PN  +Y+  +  L       EA  +  + E+    
Sbjct: 691 SAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHA 750

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
            ++   + ++  L  + ++++A + +  + +         I+LL     REG + G
Sbjct: 751 SDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIKG 806


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 236/490 (48%), Gaps = 57/490 (11%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLR 193
           R +     + +++  L +    + A+ V   M+ +G  C+P  FS   L+  Y RAG   
Sbjct: 148 RVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKG--CKPNEFSLGILVRGYCRAGLHS 205

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
           + + +L  M+ +   PN +  NT I  L    +  +A + +E+M+  G++P+++T+NC I
Sbjct: 206 HGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRI 265

Query: 254 KGYCDLHRIKDAIKLIDEMPLKG----CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
              C   +I +A ++  +M +        P+ V+Y  ++   C E   +E R + + M N
Sbjct: 266 AALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKN 325

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
              L                         + +Y   + G  R G+L +A  +L +M    
Sbjct: 326 SETL------------------------SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKN 361

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            KPN  SY   ++GLC  G   +AR ++    E    P+ +TYS ++HG  R GK+ EA 
Sbjct: 362 IKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEAN 421

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            V+REM++ G FP     N+L+ SL +EG+   A+  +Q    +G  ++ V   ++I G 
Sbjct: 422 YVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGL 481

Query: 490 CQKGDLEEALSLLDDMYL-----------------------CKKDPDTVTYTTIIDALSK 526
           C+ G+L++A+ ++  M+                         K  PD++TY TII  L K
Sbjct: 482 CKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCK 541

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTA 584
            GRV+EA + +++M+ K L P  + + T I+ YC+ G++    ++L++M  K   K    
Sbjct: 542 VGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRT 601

Query: 585 YNQVIENLCS 594
           YN +I+ L S
Sbjct: 602 YNSLIQGLGS 611



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 234/518 (45%), Gaps = 43/518 (8%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + + + Y +MLE      + + A+ +   M +        +++  M+   R+GKL  A  
Sbjct: 294 KPNTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHL 352

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L+ M +  + PNL   N  +H L      + A   L  M+ +G+ P+ +TY+ L+ GYC
Sbjct: 353 ILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYC 412

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              +I +A  ++ EM   GC P+  +   ++  L KE R  E  DL++ M+N+     D 
Sbjct: 413 RRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQ-MMNERGYGLDN 471

Query: 318 -------------GRIEEAKELVNQMSQMG-----------------------CIPDVVT 341
                        G +++A E+V+ M   G                       C+PD +T
Sbjct: 472 VTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSIT 531

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y  ++ G C+VG +D+AKK L +M      P+++ +  F+   C  GK   A  ++   E
Sbjct: 532 YATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEME 591

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           ++    +  TY+ ++ GL  E ++ E   ++ EM ++G FP     N +I  L   GK+ 
Sbjct: 592 KKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLK 651

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD-DMYLCKKDPDTVTYTTI 520
            A   + E L KG + N+  F  LI  F +  D   A  L +  + LC        Y+ +
Sbjct: 652 DATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKES--LYSFM 709

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
            + L   G   +A EL    L + L      YR +I + C+ G+++D   +L KM+ KQ 
Sbjct: 710 FNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQY 769

Query: 581 C--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
                ++  VI+ L   G    A +   +++  AS+ D
Sbjct: 770 SFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETD 807



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 229/516 (44%), Gaps = 53/516 (10%)

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           +++   M  A V P     N  I  L     L  A    ++M   G  PN  +   L++G
Sbjct: 138 IWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRG 197

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           YC        I L+DEM   G  P++V+Y TV+  LC E                     
Sbjct: 198 YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGE--------------------- 236

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY---HHGC-K 371
             G+  EA++LV +M ++G  PD+VT+   +   C+ G++ +A ++ + M      G  K
Sbjct: 237 --GQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPK 294

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PNTV+Y   L G C  G   EAR + ++ +    T +  +Y++ M GL R GKL EA  +
Sbjct: 295 PNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSE-TLSLRSYNIWMLGLVRSGKLLEAHLI 353

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           + EM +K   P     N+L+  LC+ G    A+  +      G A + V +++L+ G+C+
Sbjct: 354 LNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCR 413

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           +G + EA  +L +M      P+  T   ++ +L K GR  EA +L+  M  +G     VT
Sbjct: 414 RGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVT 473

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSK----------------------QKC---RTAYN 586
             T+I+  C+ G ++  ++++  M ++                      +KC      Y 
Sbjct: 474 CNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYA 533

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I  LC  G ++EA K L +++      D+      + +Y  +G    A++V   M  +
Sbjct: 534 TIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKK 593

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                L+    + + L  E +  E   LM    ERG
Sbjct: 594 GCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERG 629



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 148/319 (46%), Gaps = 7/319 (2%)

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           KP T ++   ++ LC  G    ARE+ +   E+   PN  +  +++ G  R G  S   D
Sbjct: 150 KPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGID 209

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           ++ EM   G  P  V  N +I SLC EG+   A+K +++    G + ++V F   I   C
Sbjct: 210 LLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALC 269

Query: 491 QKGDLEEALSLLDDMYLCKK----DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           + G + EA  +  DM + ++     P+TVTY  +++     G  EEA  +   M +   +
Sbjct: 270 KSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL 329

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKI 604
            ++ +Y   +    + G++ +   +L +M  K  +    +YN ++  LC +G   +A  I
Sbjct: 330 -SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSI 388

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
           LG +  +    D  T   L+  Y  +G  L A  V   M      P++  C  +   L  
Sbjct: 389 LGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWK 448

Query: 665 EGKSEEADTLMLRFVERGH 683
           EG++ EA+ L+    ERG+
Sbjct: 449 EGRASEAEDLLQMMNERGY 467


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 162/646 (25%), Positives = 291/646 (45%), Gaps = 65/646 (10%)

Query: 95  LEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIV---YYMMLEIL 151
           L G L  L R+  P   C    +     +A++ F   DR    RH P     Y ++++  
Sbjct: 133 LNGILAALARA-PPSAACGDAPA-----LAIELFKRMDRWACPRHSPPTIHTYNILIDCY 186

Query: 152 SKTKLCQGAKRVLRLMARRGIECRPEAFSY-LMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
            +         ++  + + G+   P+ FSY L+  + + G++  A  +   M +  V P 
Sbjct: 187 RRVHRPDLGLAIVGRLLKNGLG--PDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPK 244

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           +LICN+ I  L    ++ KA   +++M  +GI P++ TY+ +I G C    +  A ++++
Sbjct: 245 ILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLE 304

Query: 271 EMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLME-------KMVNDSNLF----HDQG 318
           +M   G  P+ ++Y +++ GY       + VR   +         V++ N F       G
Sbjct: 305 QMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHG 364

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTA---------------------------------- 344
           R  EAK + + M   G  PD+++Y+                                   
Sbjct: 365 RTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKH 424

Query: 345 ----VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
               ++N + R G +D+A  + + M + G  P+TV++   ++ LC  G+  +A    N  
Sbjct: 425 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 484

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE-INLLIQSLCREGK 459
            +    P+   Y  ++ G    G+L +A +++ EM+ K   P  V+  + +I +LC+EG+
Sbjct: 485 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 544

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +   K  M   +  G   NVV F SL+ G+C  G++EEA +LLD M     +P+   Y T
Sbjct: 545 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 604

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           ++D   KNGR+++A  +   ML KG+ PT V Y  ++H   Q  R     K+  +M+   
Sbjct: 605 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 664

Query: 580 KCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
              +   Y  V+  LC     +EA  +L K+     K D  T ++++ +    G    A 
Sbjct: 665 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 724

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           ++   +    L+P+++    +   LI E   EEAD L +   + GH
Sbjct: 725 ELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 770



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 238/548 (43%), Gaps = 59/548 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y ++++ L K+K    A+RVL  M   G   RP + +Y  L+  YS +G    ++ 
Sbjct: 279 DLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGT--RPNSITYNSLIHGYSISGMWNESVR 336

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY-------- 249
           V   M    V P +  CN+ IH L    +  +A    + M L G  P++++Y        
Sbjct: 337 VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVC 396

Query: 250 ------------------------------NCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                                         N LI  Y     +  A+ + ++M  KG  P
Sbjct: 397 YWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 456

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVN----DSNLFH--------DQGRIEEAKELV 327
           D V++ TV+  LC+  R+ +       MV+     S   +        + G + +AKEL+
Sbjct: 457 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 516

Query: 328 NQMSQMGCIPDVVTY-TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           ++M      P  V Y ++++N  C+ G + + K ++  M   G +PN V++ + + G C 
Sbjct: 517 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 576

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G   EA  +++        PN   Y  ++ G  + G++ +A  V R+M+ KG  PT V 
Sbjct: 577 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 636

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            ++++  L +  +   AKK   E +  G  V++  +  ++ G C+    +EA  LL+ ++
Sbjct: 637 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 696

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ---VG 563
                 D +T+  +I A+ K GR +EA EL   + + GLVP + TY  +I    +     
Sbjct: 697 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 756

Query: 564 RVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
             ++L   +EK       R   N ++  L +   + +A   L  +       +AST  +L
Sbjct: 757 EADNLFISVEKSGHASDSRL-LNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLL 815

Query: 624 VESYLNKG 631
              +  +G
Sbjct: 816 ASLFSREG 823



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 168/380 (44%), Gaps = 13/380 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  ++  L +      A      M   G+      +  L+      G+L  A  ++
Sbjct: 457 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 516

Query: 200 S-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           S MM K    P +   ++ I+ L    ++A+    ++ M   G  PNV+T+N L++GYC 
Sbjct: 517 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 576

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMVNDSNLF 314
           +  +++A  L+D M   G  P+   Y T++   CK  RI +     RD++ K V  +++ 
Sbjct: 577 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 636

Query: 315 HD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
           +           R   AK++ ++M + G    + TY  V+ G CR    D+A  +L++++
Sbjct: 637 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 696

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
               K + +++   ++ +   G+  EA+E+ +        PN  TYS+++  L +E    
Sbjct: 697 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 756

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA ++   + K G       +N +++ L  + ++  A  ++         +     + L 
Sbjct: 757 EADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLA 816

Query: 487 RGFCQKGDLEEALSLLDDMY 506
             F ++G   E + LL   Y
Sbjct: 817 SLFSREGKYREHIKLLPAKY 836


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 226/470 (48%), Gaps = 22/470 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG----NKLAKALRFL 234
           ++ L+ AY  AG L  +   LS + +A  AP+    + A    VVG      LA A R  
Sbjct: 75  YTTLINAYCLAGDLPASKRHLSSLLRAGFAPD----SHAYTSFVVGYCRAGLLAHACRLF 130

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
             M L G      TY  L+ G C    +++A+ +   M   GC+PD   Y T++  LC  
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 295 KRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
            R +E   L+   + +             + + + G +E A ++  +M   GC P+V TY
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           T +++GFC+  +LD+A  +  +M   G  PN V+YTA + G C +G+   A  ++ + E 
Sbjct: 251 TELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMEN 310

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               PN  T SV++  L +  ++ EA  ++  +++KG     +    LI  LC+ G+   
Sbjct: 311 SGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAA 370

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A + MQ  +++G   +   ++SLI G C++ +L EA+ +LDDM      P  VTYT IID
Sbjct: 371 ADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIID 430

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
            L +    + + +++ KM++ G+ P V TY   +  YC  GR+ED   ++  M+    C 
Sbjct: 431 ELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCP 490

Query: 583 --TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
               YN +I    + G   +A      ++    K +  +  VL+   + K
Sbjct: 491 NLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKK 540



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 236/486 (48%), Gaps = 37/486 (7%)

Query: 153 KTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           +  L   A R+  LM  RG  C   AF+Y  L+     AG +R AM V + MQ    AP+
Sbjct: 119 RAGLLAHACRLFVLMPLRG--CVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPD 176

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
             +  T +H L    +  +A   L      G  PNV+ YN LI GYC++  ++ A+ + +
Sbjct: 177 PHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFE 236

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQ---G 318
            M + GCSP+  +Y  ++   CK +++     L  +MV+          + L   Q   G
Sbjct: 237 RMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDG 296

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           +++ A  L+  M   G +P+  T + +++  C+   + +A+ +L  +   G K N + YT
Sbjct: 297 QLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYT 356

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           + ++GLC  G+   A  ++ T   + + P+A TYS ++ GL R+ +LSEA  V+ +M++K
Sbjct: 357 SLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEK 416

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P+PV   ++I  L RE   DG+KK + + +  G   +V  +T  +R +C +G +E+A
Sbjct: 417 GVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDA 476

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             ++  M      P+ VTY  +I   +  G   +A      M++ G  P   +Y TV+ R
Sbjct: 477 EHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESY-TVLLR 535

Query: 559 YC-----------------QVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLE 599
                              ++  ++ L  LLE+M+  Q       YN  + +LC    L+
Sbjct: 536 LLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLD 595

Query: 600 EAGKIL 605
           EA KIL
Sbjct: 596 EA-KIL 600



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/522 (23%), Positives = 231/522 (44%), Gaps = 30/522 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           DP VY  M+  L      + A+ +L      G E     ++ L+  Y   G L  A+ V 
Sbjct: 176 DPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVF 235

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M     +PN+      I       KL +A+    RM  AG+ PNV+TY  LI+G C  
Sbjct: 236 ERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSD 295

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR----DLMEKMVNDSNLFH 315
            ++  A +L+  M   G  P++ +   ++  LCK +R+ E +     L++K +  + + +
Sbjct: 296 GQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVY 355

Query: 316 DQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     GR   A  L+  +   G +PD  TY+++++G CR  EL +A  +L  M  
Sbjct: 356 TSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMME 415

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G +P+ V+YT  ++ L     +  ++++++        P+  TY++ +     EG++ +
Sbjct: 416 KGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMED 475

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++  MV  G  P  V  N LI      G    A    +  +  GC  N  ++T L+R
Sbjct: 476 AEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLR 535

Query: 488 GFCQK----------------GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
              +K                 +++    LL++M   +   +   Y   + +L +  R++
Sbjct: 536 LLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLD 595

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVI 589
           EA  L+++M S  L P+   Y ++I   C++  + + L  ++ M+         +Y  +I
Sbjct: 596 EAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHII 655

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            +LC  G ++ A ++ G +L      +     +L++  L KG
Sbjct: 656 SSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKG 697



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 106/458 (23%), Positives = 202/458 (44%), Gaps = 37/458 (8%)

Query: 150 ILSKTKLCQG---------AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           +++ T L QG         A R+L+ M   G+       S L+ A  +  ++  A  +L 
Sbjct: 282 VVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLG 341

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            + +  +  N ++  + I  L    + A A R ++ +   G  P+  TY+ LI G C   
Sbjct: 342 SLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQK 401

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH-- 315
            + +A+ ++D+M  KG  P  V+Y  ++  L +E      + +++KM+      ++F   
Sbjct: 402 ELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYT 461

Query: 316 -------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                   +GR+E+A+ ++  M   G  P++VTY A++ G+  +G   QA    + M  +
Sbjct: 462 IFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVAN 521

Query: 369 GCKPNTVSYTAFL---------NGLCHNGKSL----EAREMINTSEE--EWWTPNAI-TY 412
           GCKPN  SYT  L         N +  N  S+    E + +    EE  +   P+ I  Y
Sbjct: 522 GCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIY 581

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           +  +  L R  +L EA  ++ EM      P+      +I   CR   +  A  F+   + 
Sbjct: 582 NCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVK 641

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            G    + ++  +I   C++G ++ A  +  DM   + + + + +  +ID L + G V E
Sbjct: 642 SGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAE 701

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            + L+  M  K   P+   Y  +  +      ++++ +
Sbjct: 702 CSSLLSVMEEKNYRPSDALYARLTGKITDANDIQEIAR 739



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 37/288 (12%)

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TYT ++N +C  G+L  +K+ L  +   G  P++ +YT+F+ G C               
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYC--------------- 118

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
                               R G L+ AC +   M  +G   T      L+  LC  G +
Sbjct: 119 --------------------RAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMV 158

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             A          GCA +   + +++ G C  G   EA +LL D      +P+ V Y  +
Sbjct: 159 REAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNAL 218

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           ID     G +E A ++  +M   G  P V TY  +I  +C+  +++  + L  +M+    
Sbjct: 219 IDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGL 278

Query: 581 CR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
                 Y  +I+  CS G L+ A ++L  +  +    +  TC VL+++
Sbjct: 279 VPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDA 326



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 4/210 (1%)

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
           A N+  +T+LI  +C  GDL  +   L  +      PD+  YT+ +    + G +  A  
Sbjct: 69  ARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACR 128

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENL 592
           L + M  +G V T  TY  ++H  C  G V + + +   M     C      Y  ++  L
Sbjct: 129 LFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGM-QADGCAPDPHVYATMVHGL 187

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G   EA  +L   +    + +    + L++ Y N G   LA  V  RM      P++
Sbjct: 188 CGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNV 247

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +   ++        K + A  L  R V+ G
Sbjct: 248 RTYTELISGFCKSRKLDRAMMLFSRMVDAG 277


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 151/589 (25%), Positives = 277/589 (47%), Gaps = 21/589 (3%)

Query: 116 RSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECR 175
           ++QA +R      +  D+  +   D + Y  +++ L K +    A+ VL+ M  +G+  +
Sbjct: 211 KAQAVDRAEGVLQHMIDKGVKL--DVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGV--K 266

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+  +Y  ++    +A  +  A  VL  M    V P+++  NT I  L     + +A   
Sbjct: 267 PDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGV 326

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           L+ M    + P++ TYNCLI GY      K+ ++ ++EM  +G  PD V+Y  ++ YLCK
Sbjct: 327 LQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCK 386

Query: 294 EKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVT 341
             +  E R +   M+             L H    +G I +  +L++ M   G  P+   
Sbjct: 387 NGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYI 446

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           +  V+  + +   +D+A  +  +M  HG  P+ V+Y   ++ LC  G+  +A    N   
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMI 506

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
            +  TPN++ ++ +++GL    +  +A ++  EM  +G  P  V  N ++ +LC EG++ 
Sbjct: 507 NDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVM 566

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A++ +      G   NV+++ +LI G C  G  +EA  LLD M      PD ++Y T++
Sbjct: 567 VAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLL 626

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQ 579
               K GR++ A  L  +ML KG+ P  VTY T++       R  +  +L   M+   +Q
Sbjct: 627 RGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQ 686

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                YN ++  LC    ++EA KI   +     + +  T  ++++     G    A  +
Sbjct: 687 WDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDL 746

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
              + +  L+P++     + + +I EG  +E D L L  +E+    P S
Sbjct: 747 FASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLA-MEKSGCTPDS 794



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 140/554 (25%), Positives = 266/554 (48%), Gaps = 40/554 (7%)

Query: 157 CQGAKRVLRLMARRGIECRPEAFSYL--MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
           C   +RV+   AR G     +A      ++ ++R   +R   ++L+++ +A  +      
Sbjct: 12  CLELERVIADRARSGSLGIDDALKLFDELLPHARPASVRAFNHLLNVVARARCS------ 65

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           +T+   + + N++A+A           + P++ TY+ L   +C L RI+        +  
Sbjct: 66  STSELAVSLFNRMARACS-------NKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILK 118

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDL----------MEKMVNDSNLFH---DQGRIE 321
            G   ++V    ++  LC  KR+ E  D+          M  +V+ + L     ++ R+E
Sbjct: 119 TGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVE 178

Query: 322 EAKELVNQMSQMG---CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           EA EL++ M++ G   C P+VVTY  +++G C+   +D+A+ +LQ M   G K + V+Y+
Sbjct: 179 EALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYS 238

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++GLC       A  ++    ++   P+ +TY+ ++ GL +   +  A  V++ M+ K
Sbjct: 239 TIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDK 298

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  V  N +I  LC+   +D A   +Q  ++K    ++  +  LI G+   G+ +E 
Sbjct: 299 GVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEV 358

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           +  L++MY    DPD VTY+ ++D L KNG+  EA ++   M+ KG+ P V  Y  ++H 
Sbjct: 359 VRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHG 418

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIEN--LCSF---GYLEEAGKILGKVLRTAS 613
           Y   G + DL  LL+ M++      + N  I N  LC++     ++EA  I  ++ +   
Sbjct: 419 YAARGAIADLTDLLDLMVANG---ISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGL 475

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             D  T  +L+++    G    A     +M N  + P+  +   +   L    + E+A+ 
Sbjct: 476 SPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEE 535

Query: 674 LMLRFVERGHIQPK 687
           L     ++G ++P 
Sbjct: 536 LFFEMWDQG-VRPN 548



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/567 (24%), Positives = 252/567 (44%), Gaps = 22/567 (3%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVL-RLMARRGIECRPEAFS--YLMVAYSRAGKLR 193
           +R + +V   +L  L   K    A  +L R M   G  C P   S   L+       ++ 
Sbjct: 121 WRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFG--CMPNVVSCNTLLKGLCNEKRVE 178

Query: 194 NAMYVLSMMQK---AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
            A+ +L  M +       PN++  NT I  L     + +A   L+ M   G+  +V+TY+
Sbjct: 179 EALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYS 238

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            +I G C    +  A  ++  M  KG  PD V+Y T++  LCK + +     +++ M++ 
Sbjct: 239 TIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDK 298

Query: 311 S--------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                    N   D       ++ A  ++  M      PD+ TY  +++G+   GE  + 
Sbjct: 299 GVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEV 358

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            + L++MY  G  P+ V+Y+  L+ LC NGK  EAR++      +   PN   Y +++HG
Sbjct: 359 VRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHG 418

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
               G +++  D++  MV  G  P     N+++ +  ++  +D A          G + +
Sbjct: 419 YAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPD 478

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           VV +  LI   C+ G +++A+   + M      P++V + +++  L    R E+A EL  
Sbjct: 479 VVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFF 538

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFG 596
           +M  +G+ P VV + T++   C  G+V    +L++ M  +  +    +YN +I   C  G
Sbjct: 539 EMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAG 598

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
             +EA ++L  ++    K D  +   L+  Y   G    AY +   M  + + P      
Sbjct: 599 RTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYS 658

Query: 657 KVSERLILEGKSEEADTLMLRFVERGH 683
            + + L    +  EA  L L  ++ G 
Sbjct: 659 TILQGLFHTRRFSEAKELYLNMIKSGQ 685



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 203/451 (45%), Gaps = 53/451 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++L+ L K   C  A+++   M R+GI+     +  L+  Y+  G + +   +L
Sbjct: 373 DVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLL 432

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M    ++PN  I N  +        + +A+    RM   G++P+V+TY  LI   C L
Sbjct: 433 DLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKL 492

Query: 260 HRIKDAI-----------------------------------KLIDEMPLKGCSPDKVSY 284
            R+ DA+                                   +L  EM  +G  P+ V +
Sbjct: 493 GRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFF 552

Query: 285 YTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHDQ---GRIEEAKELVNQMSQ 332
            T+M  LC E ++   + L++ M         ++ + L       GR +EA +L++ M  
Sbjct: 553 NTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVS 612

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           +G  PD+++Y  ++ G+C+ G +D A  + ++M   G  P  V+Y+  L GL H  +  E
Sbjct: 613 VGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSE 672

Query: 393 AREM---INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
           A+E+   +  S ++W   +  TY+++++GL +   + EA  + + +  K   P  +   +
Sbjct: 673 AKELYLNMIKSGQQW---DIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTI 729

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           +I  L + G+   A        + G   NVV +  +++   Q+G L+E  +L   M    
Sbjct: 730 MIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG 789

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
             PD+V    II +L   G +  A   + K+
Sbjct: 790 CTPDSVMLNAIIRSLLGRGEIMRAGAYLSKI 820


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 248/545 (45%), Gaps = 75/545 (13%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  M+  L +  L + A  +L  M  R   C P   +Y  L+    R G+L     
Sbjct: 278 DTVFYNRMVSGLCEASLFEEAMDILHRM--RSSSCIPNVVTYRILLSGCLRKGQLGRCKR 335

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI---- 253
           +LSMM      PN  I N+ IH        + A +  ++M   G  P  L YN  I    
Sbjct: 336 ILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVC 395

Query: 254 ---------------KGY----------------------CDLHRIKDAIKLIDEMPLKG 276
                          K Y                      C   +   A K+I EM  KG
Sbjct: 396 SNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKG 455

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAK 324
             PD  +Y  V+G+LC   ++++   L E+M  +             + F   G I++A+
Sbjct: 456 FVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQAR 515

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +  ++M   GC P+VVTYTA+++ + +  ++  A ++ + M   GCKPN V+YTA ++G 
Sbjct: 516 KWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGH 575

Query: 385 CHNGKSLEA-------REMINTSEEEWW---------TPNAITYSVVMHGLRREGKLSEA 428
           C  G+  +A       R  I +S+ + +          PN ITY  ++ GL +  ++ EA
Sbjct: 576 CKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEA 635

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            +++  M+  G  P  +  + +I   C+ GK+  A++   +   +G + N+  ++S I  
Sbjct: 636 HELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDC 695

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
             +   L+  L +L  M      P+ V YT ++D L K G+ +EA +LM+KM  KG  P 
Sbjct: 696 LFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPN 755

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILG 606
           VVTY  +I  + + G++E  L+L   M SK        Y  +I + CS G L+EA K+L 
Sbjct: 756 VVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLD 815

Query: 607 KVLRT 611
           ++ +T
Sbjct: 816 EMKQT 820



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 251/517 (48%), Gaps = 38/517 (7%)

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           AGK   A  ++  M      P+    +  I  L   +K+ KA    E M+  GI P+V T
Sbjct: 438 AGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYT 497

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM- 307
           Y  LI  +C    I+ A K  DEM  KGC+P+ V+Y  ++    K K++    +L E M 
Sbjct: 498 YTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMML 557

Query: 308 --------VNDSNLFHDQ---GRIEEAKELVNQM------SQM---------GC-IPDVV 340
                   V  + L       G+IE+A ++  +M      S M          C  P+V+
Sbjct: 558 LEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVI 617

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TY A+V+G C+   + +A ++L  M  HGC+PN + Y A ++G C  GK  +A+E+    
Sbjct: 618 TYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKM 677

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
            E  ++PN  TYS  +  L ++ +L     V+ +M++    P  V    ++  LC+ GK 
Sbjct: 678 SERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKT 737

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD--PDTVTYT 518
           D A K M +   KGC  NVV +T++I GF + G +E+ L L  DM  C K   P+ +TY 
Sbjct: 738 DEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDM--CSKGCAPNFITYR 795

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            +I+    NG ++EA +L+ +M        ++++R +I  + Q       + LL+++   
Sbjct: 796 VLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQ--EFITSIGLLDELSEN 853

Query: 579 QK--CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST--CHVLVESYLNKGIPL 634
           +     + Y  +I+N    G LE A  +L ++  + S A ++      L+E+  +     
Sbjct: 854 ESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVD 913

Query: 635 LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
            A ++   M ++N++P+L +   + + LI   K +EA
Sbjct: 914 KALELYASMISKNVVPELSILVHLIKGLIKVDKWQEA 950



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/671 (22%), Positives = 285/671 (42%), Gaps = 79/671 (11%)

Query: 87  LRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYM 146
           L++ ++ +     R     L    +  V+ +  +  + ++FF WA RQ  Y H P V+  
Sbjct: 85  LKTGFNIETHQFFRQFRNQLNDSLVVEVMNNVKNPELCVKFFLWAGRQIGYSHTPQVFDK 144

Query: 147 MLEILSKTKLCQGAKRVLRLMARRG--IECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQK 204
           +L++L           +  LM  +    E      ++L+    R G    A+  L  ++ 
Sbjct: 145 LLDLLGCNVNADDRVPLKFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKD 204

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
               P+    N  I V +  +KL  A      M       +  T +C     C   + ++
Sbjct: 205 FGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCRE 264

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH--------- 315
           A  LIDE   +   PD V Y  ++  LC+    +E  D++ +M + S + +         
Sbjct: 265 AFDLIDEA--EDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLS 322

Query: 316 ---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
               +G++   K +++ M   GC P+   + ++++ +C+  +   A K+ ++M   GC+P
Sbjct: 323 GCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQP 382

Query: 373 NTVSYTAFLNGLCHN-----------------------------------------GKSL 391
             + Y  F+  +C N                                         GK  
Sbjct: 383 GYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFD 442

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           +A ++I     + + P+  TYS V+  L    K+ +A  +  EM + G  P+     +LI
Sbjct: 443 QAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILI 502

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
            S C+ G +  A+K+  E L+KGC  NVV +T+LI  + +   +  A  L + M L    
Sbjct: 503 DSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCK 562

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV------------------PTVVTYR 553
           P+ VTYT +ID   K G++E+A ++  +M  +G +                  P V+TY 
Sbjct: 563 PNVVTYTALIDGHCKAGQIEKACQIYARM--RGDIESSDMDKYFKLDHNNCEGPNVITYG 620

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            ++   C+  RV++  +LL+ ML+   +  +  Y+ VI+  C  G L++A ++  K+   
Sbjct: 621 ALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSER 680

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
               +  T    ++         L  KV  +M   +  P++ +  ++ + L   GK++EA
Sbjct: 681 GYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEA 740

Query: 672 DTLMLRFVERG 682
             LML+  E+G
Sbjct: 741 YKLMLKMEEKG 751



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 220/470 (46%), Gaps = 32/470 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++  L      + A  +   M R GI      ++ L+ ++ +AG ++ A    
Sbjct: 459 DDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWF 518

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M      PN++     IH  +   ++  A    E M L G  PNV+TY  LI G+C  
Sbjct: 519 DEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKA 578

Query: 260 HRIKDAIKLIDEM---------------PLKGC-SPDKVSYYTVMGYLCKEKRIKEVRDL 303
            +I+ A ++   M                   C  P+ ++Y  ++  LCK  R+KE  +L
Sbjct: 579 GQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHEL 638

Query: 304 MEKM----------VNDSNL--FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           ++ M          V D+ +  F   G++++A+E+  +MS+ G  P++ TY++ ++   +
Sbjct: 639 LDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFK 698

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
              LD   K+L +M  + C PN V YT  ++GLC  GK+ EA +++   EE+   PN +T
Sbjct: 699 DNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVT 758

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+ ++ G  + GK+ +  ++ R+M  KG  P  +   +LI   C  G +D A K + E  
Sbjct: 759 YTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMK 818

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
                 ++++   +I GF Q  +   ++ LLD++   +  P    Y  +ID   K GR+E
Sbjct: 819 QTYWPKHILSHRKIIEGFSQ--EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLE 876

Query: 532 EATELMMKMLSKG--LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
            A +L+ ++ S     V     Y ++I       +V+  L+L   M+SK 
Sbjct: 877 VALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKN 926



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 154/644 (23%), Positives = 270/644 (41%), Gaps = 77/644 (11%)

Query: 77  LVREVCRLIELRSAWSPKLE--GELRNLLRSLKPRQICAVLRSQADERVALQFFYWADR- 133
           LVR+ CR       W+  LE  G L++     KP        SQ      +Q F  AD+ 
Sbjct: 182 LVRKCCR----NGWWNMALEELGRLKDF--GYKP--------SQTTYNALIQVFLRADKL 227

Query: 134 --QWRYRHDPIVYYMMLEILSKT----KLCQGAKRVLRLMARRGIECRPEAFSYL--MVA 185
              +  + + + Y  +++  + +     LC+G K       R   +   EA  ++   V 
Sbjct: 228 DTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGK------CREAFDLIDEAEDFVPDTVF 281

Query: 186 YSR-------AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           Y+R       A     AM +L  M+ ++  PN++     +   +   +L +  R L  M 
Sbjct: 282 YNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMI 341

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC--KEKR 296
             G  PN   +N LI  YC       A KL  +M   GC P  + Y   +G +C  +E+ 
Sbjct: 342 TEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQP 401

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
             ++ DL+EK  +                   +M  +G + + V  +      C  G+ D
Sbjct: 402 SSDILDLVEKAYS-------------------EMLDLGVVLNKVNVSNFARCLCGAGKFD 442

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           QA K++ +M   G  P+  +Y+  +  LC   K  +A  +    +     P+  TY++++
Sbjct: 443 QAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILI 502

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
               + G + +A     EM+ KG  P  V    LI +  +  +M  A +  +  L +GC 
Sbjct: 503 DSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCK 562

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSL------------LDDMYLCKKD----PDTVTYTTI 520
            NVV +T+LI G C+ G +E+A  +            +D  +    +    P+ +TY  +
Sbjct: 563 PNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGAL 622

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           +D L K  RV+EA EL+  ML+ G  P  + Y  VI  +C++G+++D  ++  KM  +  
Sbjct: 623 VDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGY 682

Query: 581 CRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
                 Y+  I+ L     L+   K+L K+L  +   +      +V+     G    AYK
Sbjct: 683 SPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYK 742

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +  +M  +   P++     + +     GK E+   L      +G
Sbjct: 743 LMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKG 786



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/405 (23%), Positives = 176/405 (43%), Gaps = 42/405 (10%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  +++ L K    + A  +L  M   G E     +  ++  + + GKL++A  V + 
Sbjct: 617 ITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTK 676

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +   +PNL   ++ I  L   N+L   L+ L +M     TPNV+ Y  ++ G C + +
Sbjct: 677 MSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGK 736

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
             +A KL+ +M  KGC+P+ V+Y  ++                       + F   G+IE
Sbjct: 737 TDEAYKLMLKMEEKGCNPNVVTYTAMI-----------------------DGFGKSGKIE 773

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +  EL   M   GC P+ +TY  ++N  C  G LD+A K+L +M       + +S+   +
Sbjct: 774 QCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKII 833

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
            G     + + +  +++   E    P    Y +++    + G+L  A D++ E+      
Sbjct: 834 EGFSQ--EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSS--- 888

Query: 442 PTPVEIN-----LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           P+    N      LI++L    K+D A +     ++K     +     LI+G  +    +
Sbjct: 889 PSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQ 948

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           EAL L D   +C+ D   +            GR EE  +L++  +
Sbjct: 949 EALQLSDS--ICQMDIHWLQEKA-------TGRTEEMVKLVIAAM 984


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 244/521 (46%), Gaps = 33/521 (6%)

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           L +A+     M ++      + CN  I V V  N+   A+    +M++  I  N+ ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LIK +CD H++  ++    ++   G  PD V++ T++  LC E RI E   L   MV   
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 312 NL----FHDQ-----------------------GRIEEAKELVNQMSQMGCIPDVVTYTA 344
            L      DQ                       GR+ EA  LVN+M   G   DVVTY  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +VNG C++G+   A  +L +M     KP+ V Y+A ++ LC +G   +A+ + +   E+ 
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             PN  TY+ ++ G    G+ S+A  ++R+M+++   P  +  N LI +  +EGK+  A+
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           K   E L++    + V + S+I GFC+    ++A  + D M      PD VT+ TIID  
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVY 442

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA 584
            +  RV+E  +L+ ++  +GLV    TY T+IH +C+V  +     L ++M+S   C   
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502

Query: 585 Y--NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
              N ++   C    LEEA ++   +  +    D    ++++           A+ + C 
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +    + PD++    +      +    +A+ L  +  + GH
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 238/525 (45%), Gaps = 70/525 (13%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  + R M  R I     +F+ L+  +    KL  ++     + K    P+++  NT +H
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 220 VLVVGNKLAKALR---------FLERMQL------AGITPNVLTYNCLIKGYCDLHRIKD 264
            L + +++++AL          FLE + L       G+TP V+T+N LI G C   R+ +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------- 316
           A  L+++M  KG   D V+Y T++  +CK    K   +L+ KM  ++++  D        
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM-EETHIKPDVVIYSAII 303

Query: 317 -----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC--------------------- 350
                 G   +A+ L ++M + G  P+V TY  +++GFC                     
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363

Query: 351 --------------RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
                         + G+L +A+K+  +M H    P+TV+Y + + G C + +  +A+ M
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
            +       +P+ +T++ ++    R  ++ E   ++RE+ ++G        N LI   C 
Sbjct: 424 FDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
              ++ A+   QE ++ G   + +    L+ GFC+   LEEAL L + + + K D DTV 
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y  II  + K  +V+EA +L   +   G+ P V TY  +I  +C    + D   L  KM 
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599

Query: 577 --SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
               +   + YN +I      G ++++ +++ ++       DA T
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 193/420 (45%), Gaps = 18/420 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  ++  M  +G+      +  ++    + G  ++A+ +LS M++  + P+++I +  I 
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L      + A      M   GI PNV TYNC+I G+C   R  DA +L+ +M  +  +P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKEL 326
           D +++  ++    KE ++ E   L ++M++   +F D               R ++AK +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRC-IFPDTVTYNSMIYGFCKHNRFDDAKHM 423

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
            + M+     PDVVT+  +++ +CR   +D+  ++L+++   G   NT +Y   ++G C 
Sbjct: 424 FDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
                 A+++          P+ IT +++++G     KL EA ++   +         V 
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            N++I  +C+  K+D A          G   +V  +  +I GFC K  + +A  L   M 
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
               +PD  TY T+I    K G ++++ EL+ +M S G      T +      C+V   E
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEE 659



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 178/374 (47%), Gaps = 8/374 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++  + K    + A  +L  M    I+     +S ++    + G   +A Y+ 
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S M +  +APN+   N  I       + + A R L  M    I P+VLT+N LI      
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            ++ +A KL DEM  +   PD V+Y +++   CK  R  + + + + M +          
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           +++    R++E  +L+ ++S+ G + +  TY  +++GFC V  L+ A+ + Q+M  HG  
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+T++    L G C N K  EA E+    +      + + Y++++HG+ +  K+ EA D+
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
              +   G  P     N++I   C +  +  A     +  + G   +   + +LIRG  +
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619

Query: 492 KGDLEEALSLLDDM 505
            G++++++ L+ +M
Sbjct: 620 AGEIDKSIELISEM 633



 Score = 40.4 bits (93), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 37/187 (19%), Positives = 76/187 (40%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I   ++L    + +  + A  +  ++    I+    A++ ++    +  K+  A  + 
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +    V P++   N  I      + ++ A     +M+  G  P+  TYN LI+G    
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             I  +I+LI EM   G S D  +       +C+    + + + +   +N       +  
Sbjct: 621 GEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLRPKINGETSSIPRYV 680

Query: 320 IEEAKEL 326
           +E A+EL
Sbjct: 681 VELAEEL 687


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 199/402 (49%), Gaps = 39/402 (9%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GK   A  +L  M +    P+       I  L    K+ K+    + M+ AG+ P+V TY
Sbjct: 431 GKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTY 490

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             LI  +C    I+ A    DEM   GCSP+ V+Y  ++    K K++ +  D+  +MV+
Sbjct: 491 TILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVD 550

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM---- 365
            +                       C P+ VTY+A+++G C+ GE+ +A ++ +++    
Sbjct: 551 AA-----------------------CYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTS 587

Query: 366 -------YHHG-----CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
                  Y  G       PN V+Y A ++GLC   K  +A E+++        PN I Y 
Sbjct: 588 GNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYD 647

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++ G  + GK+  A +V   M K G+ P+      LI  + ++G++D A K + E LN 
Sbjct: 648 ALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLND 707

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
            C  NVV +T++I G  + G++E+AL+LL  M      P+ VTYT +ID L K G+ + +
Sbjct: 708 SCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADAS 767

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            +L  +M SKG  P  VTYR +I+  C  G +++   LL++M
Sbjct: 768 LKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM 809



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 159/692 (22%), Positives = 286/692 (41%), Gaps = 140/692 (20%)

Query: 123 VALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR---------------LM 167
           + ++FF WA+RQ  Y H    Y  + EIL      + A+R+LR               ++
Sbjct: 116 LCVRFFLWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVL 175

Query: 168 ARR------------------GIECRPEAFSY--LMVAYSRAGKLRNAMYV--------- 198
            RR                      RP A +Y  L+   + AG++     V         
Sbjct: 176 VRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGF 235

Query: 199 -----------------------LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
                                  L+M++K     + ++C   I  L+  +   +A+ FL 
Sbjct: 236 CMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLH 295

Query: 236 RMQLAGITPNVLTY-----------------------------------NCLIKGYCDLH 260
           RM+     PNV+TY                                   N L+ GYC+  
Sbjct: 296 RMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAG 355

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI--KEVRDLMEKM----------- 307
               A KL + M   G  P  V+Y   +G +C ++ +   E+ DL+EK+           
Sbjct: 356 DYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVL 415

Query: 308 --VNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
             VN +N        G+ E+A +++ +M + G +PD  TYT V+   C+  +++++  + 
Sbjct: 416 NKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLF 475

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           Q+M   G  P+  +YT  ++  C  G   +AR   +       +PN +TY+ ++H   + 
Sbjct: 476 QEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKS 535

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL----------- 471
            +L +A D+   MV    +P  V  + LI  LC+ G++  A +  ++ +           
Sbjct: 536 KQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFY 595

Query: 472 ---NKGCAV--NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
              N  C +  NVV + +LI G C+   + +A  LLD M     +P+ + Y  +ID   K
Sbjct: 596 FEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCK 655

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---T 583
            G+++ A E+ ++M   G +P+V TY ++I R  + GR++  +K+L +ML+   C     
Sbjct: 656 IGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLN-DSCNPNVV 714

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            Y  +I+ L   G +E+A  +L  +       +  T   L++     G    + K+  +M
Sbjct: 715 TYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQM 774

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
            ++   P+    + +       G  +EA  L+
Sbjct: 775 NSKGCAPNYVTYRVLINHCCAAGLLDEAHLLL 806



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 231/490 (47%), Gaps = 35/490 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A ++L+ M R+G       ++ ++    +A K+  +  +   M++A V P++      I 
Sbjct: 436 AFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILID 495

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A  + + M+  G +PNV+TY  L+  Y    ++  A  +   M    C P
Sbjct: 496 SFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYP 555

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----NLFHDQG----------------- 318
           + V+Y  ++  LCK   I++  ++ EK++  S    + F+ +G                 
Sbjct: 556 NAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALI 615

Query: 319 -------RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                  ++ +A EL++ M   GC P+ + Y A+++GFC++G++D A+++  +M   G  
Sbjct: 616 DGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYL 675

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+  +YT+ ++ +  +G+   A ++++    +   PN +TY+ ++ GL + G++ +A ++
Sbjct: 676 PSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNL 735

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           +  M +KG  P  V    LI  L + GK D + K  ++  +KGCA N V +  LI   C 
Sbjct: 736 LSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCA 795

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G L+EA  LLD+M           Y   +   SK  +   +  L+ +M S   VP    
Sbjct: 796 AGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--KFIASLGLLEEMESHETVPIAPV 853

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLS-----KQKCRTAYNQVIENLCSFGYLEEAGKILG 606
           Y  +I  + + GR+E  L+L ++++             Y  +I+ LC    +EEA  +  
Sbjct: 854 YGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYT 913

Query: 607 KVLRTASKAD 616
           ++ R     D
Sbjct: 914 EMTRKGIVPD 923



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/574 (23%), Positives = 253/574 (44%), Gaps = 50/574 (8%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           + + YR   + Y  ++++L+     +   RV + M+  G         Y   A  + G+ 
Sbjct: 196 KDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRW 255

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            +A   L+M++K     + ++C   I  L+  +   +A+ FL RM+     PNV+TY  L
Sbjct: 256 ADA---LNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTL 312

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           + G+    +     ++I+ M  +GC+P+   + +++   C                    
Sbjct: 313 LSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYC-------------------- 352

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL------DQAKKMLQQMY 366
              + G    A +L N+M+  G  P  V Y   +   C   EL      D  +K+ ++M 
Sbjct: 353 ---NAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEML 409

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
              C  N V+   F   LC  GK  +A +++     + + P+  TY+ V+  L +  K+ 
Sbjct: 410 AASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVE 469

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           ++  + +EM + G  P      +LI S C+ G ++ A+ +  E  + GC+ NVV +T+L+
Sbjct: 470 KSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALL 529

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG-- 544
             + +   L +A  +   M      P+ VTY+ +ID L K G +++A E+  K++     
Sbjct: 530 HAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGN 589

Query: 545 --------------LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQV 588
                         + P VVTY  +I   C+  +V D  +LL+ ML+   +  +  Y+ +
Sbjct: 590 VESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDAL 649

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I+  C  G ++ A ++  ++ +        T   L++     G   LA KV   M N + 
Sbjct: 650 IDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSC 709

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            P++     + + L   G+ E+A  L+    E+G
Sbjct: 710 NPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKG 743



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 218/488 (44%), Gaps = 83/488 (17%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y ++++   K  L + A+     M  R + C P   +Y  L+ AY ++ +L  A  
Sbjct: 486 DVYTYTILIDSFCKAGLIEQARSWFDEM--RSVGCSPNVVTYTALLHAYLKSKQLIQAHD 543

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM----------------QLAG 241
           +   M  AA  PN +  +  I  L    ++ KA    E++                    
Sbjct: 544 IFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCT 603

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I PNV+TY  LI G C   ++ DA +L+D M   GC P+++ Y  ++   CK        
Sbjct: 604 IAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCK-------- 655

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                           G+I+ A+E+  +M++ G +P V TYT++++   + G LD A K+
Sbjct: 656 ---------------IGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 700

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L +M +  C PN V+YTA ++GL   G+  +A  +++  EE+  +PN +TY+ ++ GL +
Sbjct: 701 LSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGK 760

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            GK   +  + ++M  KG  P  V   +LI   C  G +D A   + E  +     ++  
Sbjct: 761 TGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQG 820

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR------------ 529
           +   ++GF +K     +L LL++M   +  P    Y  +ID+ SK GR            
Sbjct: 821 YHCAVQGFSKK--FIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELV 878

Query: 530 --------------------------VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
                                     VEEA  L  +M  KG+VP ++ + +++    +V 
Sbjct: 879 EVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVN 938

Query: 564 RVEDLLKL 571
           + ++ L+L
Sbjct: 939 KWDEALQL 946



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 106/245 (43%), Gaps = 21/245 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  M++ LSK    + A  +L LM  +G  C P   +Y  L+    + GK   ++ + 
Sbjct: 714 VTYTAMIDGLSKVGEIEKALNLLSLMEEKG--CSPNVVTYTALIDGLGKTGKADASLKLF 771

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M     APN +     I+       L +A   L+ M+      ++  Y+C ++G+   
Sbjct: 772 KQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFS-- 829

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG- 318
            +   ++ L++EM      P    Y  ++    K  R++   +L +++V  S+  +    
Sbjct: 830 KKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTST 889

Query: 319 --------------RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                         ++EEA  L  +M++ G +PD++ + ++V G   V + D+A ++   
Sbjct: 890 GMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYG 949

Query: 365 MYHHG 369
             H G
Sbjct: 950 RCHEG 954


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 239/495 (48%), Gaps = 30/495 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
             Y  +++ L K    + + +VL  M   G  C P+ F++  +M  ++R+  +  A  V 
Sbjct: 11  FTYSSIIKSLVKEAKPEESYKVLEEMMAAG--CNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M ++   P+ +  +  IH L    KL ++L+ L  M + G TP++  Y+ L++     
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R+  A  L DEM   G  PD++ +Y ++  LC+                        G+
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQ-----------------------AGK 165

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +++A E   QM + GC P+V  Y  +++G C  G+L+QA  +  +M  H C P+ V+Y  
Sbjct: 166 VKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNT 225

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L+ +C   +  E  ++        + PN IT+S ++HGL R G+L +A +V   M++ G
Sbjct: 226 LLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG 285

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P       LI  LCR  K+  A++  ++        + V + SLI G+C++G ++EA 
Sbjct: 286 CKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAE 345

Query: 500 SLLDDMYLCKK-DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
            L  +M       P  VT+ T+ID   K G++  A EL+ +M +KGL     TYR +I  
Sbjct: 346 KLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAG 405

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTAYNQV--IENLCSFGYLEEAGKILGKVLRTASKAD 616
             +  ++++ L++ ++M  K+      + V  +  LC  G +++A  +     ++ +  +
Sbjct: 406 LSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPN 465

Query: 617 ASTCHVLVESYLNKG 631
             T  +L ES +  G
Sbjct: 466 PETFRILSESLIKLG 480



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 213/438 (48%), Gaps = 24/438 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y+ D + Y++++  L+K      + ++L  M  RG     +A+S L+ A ++A ++ +A 
Sbjct: 76  YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHAS 135

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   M +    P+ L+    I  L    K+  A    ++M   G  PNV  YN L+ G 
Sbjct: 136 SLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGL 195

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   +++ A  L  EM    CSPD V+Y T++  +CK +R+                   
Sbjct: 196 CSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRV------------------- 236

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
               EE  +L   M   G +P+V+T++ +++G CR GEL++A ++   M   GCKPN  +
Sbjct: 237 ----EEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 292

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YT  ++GLC   K ++ARE+     +    P+A+ Y+ ++ G  + G + EA  + REM 
Sbjct: 293 YTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMS 352

Query: 437 K-KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              G  PT V  N LI   C+ GK+  A + + E   KG A +   +  LI G  +   L
Sbjct: 353 GGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKL 412

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           +EAL +   M   K   D V+  + +  L K G +++A  +       G VP   T+R +
Sbjct: 413 DEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRIL 472

Query: 556 IHRYCQVGRVEDLLKLLE 573
                ++GRVED  KL+E
Sbjct: 473 SESLIKLGRVEDAQKLME 490



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 234/491 (47%), Gaps = 19/491 (3%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+   +A N+   ++ I  LV   K  ++ + LE M  AG  P+V  +N +++G+   + 
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG--- 318
           ++ A ++   M   G  PD VSY+ ++  L K  ++ E   ++ +MV        Q    
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 319 ---------RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                    R++ A  L ++M + G  PD + +  ++ G C+ G++  A +  +QM  HG
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
           C+PN   Y   L+GLC +G+  +A  +    +    +P+ +TY+ ++  + +  ++ E C
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            +   M   G+ P  +  + LI  LCR G+++ A +     L  GC  N   +T+LI G 
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML-SKGLVPT 548
           C+   + +A  L + M      PD V Y ++I    K G ++EA +L  +M    GL PT
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM----LSKQKCRTAYNQVIENLCSFGYLEEAGKI 604
           +VT+ T+I  +C++G++    +L+ +M    L+   C   Y  +I  L     L+EA ++
Sbjct: 361 IVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSC--TYRILIAGLSRATKLDEALEV 418

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
             ++       D  +C   V      G    AY V         +P+ +  + +SE LI 
Sbjct: 419 YKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIK 478

Query: 665 EGKSEEADTLM 675
            G+ E+A  LM
Sbjct: 479 LGRVEDAQKLM 489



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 165/351 (47%), Gaps = 2/351 (0%)

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           +V TY++++    +  + +++ K+L++M   GC P+  ++   + G   +    +ARE+ 
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
               E  + P+ ++Y +++HGL + GKL E+  ++ EMV +G  P+    + L+++L + 
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
            ++D A     E +  G   + + F  LI G CQ G +++A      M      P+   Y
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
             ++  L  +G++E+A  L  +M S    P VVTY T++   C+  RVE+  KL E M +
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248

Query: 578 KQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
                    ++ +I  LC  G LE+A ++ G +L    K +  T   L+         + 
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           A ++  +M    + PD      +       G  +EA+ L         +QP
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 359



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 122/280 (43%), Gaps = 13/280 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +L+ + K +  +   ++   M   G       FS L+    R G+L  A+ V 
Sbjct: 219 DVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF 278

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +A   PN     T I  L    K+ +A    E+M  A I P+ + YN LI GYC  
Sbjct: 279 GSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 338

Query: 260 HRIKDAIKLIDEMPL-KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNL 313
             + +A KL  EM    G  P  V++ T++   CK  ++    +L+ +M       DS  
Sbjct: 339 GSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCT 398

Query: 314 FH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
           +           +++EA E+  QM +   + D V+  + V G C+ G +DQA  + +   
Sbjct: 399 YRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATR 458

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
             G  PN  ++      L   G+  +A++++  ++    T
Sbjct: 459 KSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDIT 498



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 4/147 (2%)

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFG 596
           M  K +   V TY ++I    +  + E+  K+LE+M++   C     A+N V++      
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMA-AGCNPDVFAFNGVMQGFARSN 59

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            +E+A ++   ++ +  K D  + H+L+      G    + K+   M  R   P ++   
Sbjct: 60  NMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYS 119

Query: 657 KVSERLILEGKSEEADTLMLRFVERGH 683
            +   L    + + A +L    +  GH
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGH 146


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 223/458 (48%), Gaps = 51/458 (11%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           + GK   A+Y L  M K    P++++C   I  L    +  KA+R +E ++  G  P+  
Sbjct: 89  KTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG-DPDSF 147

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            YN +I G+C   R   A ++I  M  +G SPD V+Y  ++G LC   ++     +M+++
Sbjct: 148 AYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQL 207

Query: 308 VND--------------SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
           + D              + + H  G I++A  L+++M   G  PD+ TY  +V G C+ G
Sbjct: 208 LEDNCNPTVITYTILIEATIIH--GSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRG 265

Query: 354 ELDQA--------------------------------KKMLQQMYHHGCKPNTVSYTAFL 381
            +D+A                                ++++  M   GC+PN V+Y+  +
Sbjct: 266 LVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLI 325

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           + LC +GK+ EA +++   +E+   P+A  Y  ++    +EGK+  A   V +M+  G+ 
Sbjct: 326 SSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWL 385

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N ++ SLC++G+ D A    ++    GC  N  ++ ++       GD   AL++
Sbjct: 386 PDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTM 445

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           + +M     DPD +TY ++I +L ++G V+EA  L++ M      PTV++Y  V+   C+
Sbjct: 446 ILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCK 505

Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGY 597
             R+ D +++L  M+    Q   T Y  ++E +   G+
Sbjct: 506 AHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGW 543



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 202/452 (44%), Gaps = 49/452 (10%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y+ D I+   +++ L  +K  + A RV+ ++ + G    P++F+Y  ++  + R+ +   
Sbjct: 108 YKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG---DPDSFAYNAVISGFCRSDRFDA 164

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  V+  M+    +P+++  N  I  L    KL  AL+ ++++      P V+TY  LI+
Sbjct: 165 ANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIE 224

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
                  I DA++L+DEM  +G  PD  +Y  ++  +CK   +    + +  +    +L 
Sbjct: 225 ATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLN 284

Query: 315 HD---------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                      +GR E  + L++ M   GC P++VTY+ +++  CR G+  +A  +L+ M
Sbjct: 285 LYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVM 344

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  P+   Y   ++  C  GK   A   ++      W P+ + Y+ +M  L ++G+ 
Sbjct: 345 KEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRA 404

Query: 426 SEACDVVR-----------------------------------EMVKKGFFPTPVEINLL 450
            EA ++ +                                   EM+  G  P  +  N L
Sbjct: 405 DEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSL 464

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I SLCR+G +D A   + +         V+++  ++ G C+   + +A+ +L  M     
Sbjct: 465 ISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGC 524

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            P+  TYT +++ +   G    A EL   ++S
Sbjct: 525 QPNETTYTLLVEGVGYAGWRSYAVELAKSLVS 556



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 197/411 (47%), Gaps = 21/411 (5%)

Query: 291 LCKEKRIKEVRDLMEKMVNDS-------------NLFHDQGRIEEAKELVNQMSQMGCIP 337
           LCK  +  E    +E+MV                 LF  + R E+A  ++  + Q G  P
Sbjct: 87  LCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSK-RTEKAVRVMEILEQYG-DP 144

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D   Y AV++GFCR    D A +++ +M + G  P+ V+Y   +  LC  GK   A +++
Sbjct: 145 DSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVM 204

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +   E+   P  ITY++++      G + +A  ++ EM+ +G  P     N++++ +C+ 
Sbjct: 205 DQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKR 264

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G +D A +F+    N     ++  +  L++G   +G  E    L+ DM +   +P+ VTY
Sbjct: 265 GLVDRAFEFVS---NLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTY 321

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           + +I +L ++G+  EA +++  M  KGL P    Y  +I  +C+ G+V+  +  ++ M+S
Sbjct: 322 SVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMIS 381

Query: 578 KQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
                    YN ++ +LC  G  +EA  I  K+       +AS+ + +  +  + G  + 
Sbjct: 382 AGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIR 441

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           A  +   M +  + PD      +   L  +G  +EA  L++  +ER   QP
Sbjct: 442 ALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVD-MERTEWQP 491


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/540 (27%), Positives = 259/540 (47%), Gaps = 26/540 (4%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y  ++ +L K+  C+ A +V R M   GI+   + +S LMVA  +   +   M +L  M+
Sbjct: 195 YIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEME 254

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
              + PN+      I +L    K+ +A   L+RM  AG  P+V+TY  LI   C+  ++ 
Sbjct: 255 SLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLN 314

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
           +A +L  +M      PD+V+Y T                L++K       F D G ++  
Sbjct: 315 NAKELFLKMKASSHKPDRVTYIT----------------LLDK-------FSDHGDLDAI 351

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
           KE  ++M   G +PDVVT+T +++  C+VG++D+A   L  M   G  PN  +Y   + G
Sbjct: 352 KEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICG 411

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           L    +  EA E+ N+ E       A TY + +    + G+  +A     +M   G  P 
Sbjct: 412 LLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPN 471

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V  N  + SL  +G+++ AK+F       G A + + +  L+R + + G +++A+ LL 
Sbjct: 472 IVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLS 531

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M     DP+ V   ++ID L K  RV+EA ++  +M    L PTVVTY T++    + G
Sbjct: 532 EMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEG 591

Query: 564 RVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           RV++   L + M++        ++N +++ LC  G ++ A K+L ++       D  T +
Sbjct: 592 RVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYN 651

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
            ++   + +     A+ +  +M  + + PD      +   +I +G+ E+A  +   FV  
Sbjct: 652 TVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHH 710



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 250/523 (47%), Gaps = 27/523 (5%)

Query: 142  IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
            + Y  +L  L K    Q A  + + M     +C P   S+  L+    + G++  A+ +L
Sbjct: 578  VTYNTLLAGLGKEGRVQEATALFKGMIAD--DCPPNTISFNTLLDCLCKNGEVDLALKML 635

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
              M +    P++L  NT I+ L+  N++  A     +M+   I P+ +T   L+ G    
Sbjct: 636  FRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKD 694

Query: 260  HRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV------NDSN 312
             RI+DA ++  E     G   D   +  +MG +  E  I +     E +V      +DS 
Sbjct: 695  GRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSV 754

Query: 313  LFH------DQGRIEEAKELVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            L          G+  +A  +  ++++  CI P +  Y ++++G  +    + A  +  +M
Sbjct: 755  LIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKM 814

Query: 366  YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW---TPNAITYSVVMHGLRRE 422
             + GC P+  +Y  FL+ L   GKS + +E+ +  EE  +    PN IT+++V+ GL + 
Sbjct: 815  KNAGCTPDVFTYNLFLDAL---GKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKS 871

Query: 423  GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
              L +A D+  +++   F PTP     LI  L + G+++ AK+F +E L+ GC  N   +
Sbjct: 872  NSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLY 931

Query: 483  TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
              L+ GF ++GD+E A  L   M      PD  +Y+ ++D L   G+V++A     ++  
Sbjct: 932  NILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKL 991

Query: 543  KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEE 600
             GL P +V Y  +I+   +  RVE+ L L ++M ++        YN +I NL   G +EE
Sbjct: 992  SGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEE 1051

Query: 601  AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            AGK+  ++     + +  T + L+  +   G P  AY V  +M
Sbjct: 1052 AGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKM 1094



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 162/344 (47%), Gaps = 23/344 (6%)

Query: 233  FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
            FL+  +   ITP++  YN LI G       + A  L  +M   GC+PD  +Y   +  L 
Sbjct: 775  FLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALG 834

Query: 293  KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
            K  +IKE+ DL E+M     LF                   GC P+ +T+  V+ G  + 
Sbjct: 835  KSGKIKELFDLYEEM-----LFR------------------GCKPNTITHNIVIFGLVKS 871

Query: 353  GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
              LD+A  +   +      P   +Y   ++GL   G+  EA++      +    PN   Y
Sbjct: 872  NSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLY 931

Query: 413  SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
            +++M+G  ++G +  AC++ R MVK+G  P     ++++  LC  GK+D A  + +E   
Sbjct: 932  NILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKL 991

Query: 473  KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
             G   ++V +  +I G  +   +EEALSL D+M      PD  TY  +I  L   G VEE
Sbjct: 992  SGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEE 1051

Query: 533  ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
            A ++  ++  KGL P V TY  +I  +   G  +    + +KM+
Sbjct: 1052 AGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMM 1095



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 167/346 (48%), Gaps = 13/346 (3%)

Query: 188  RAGKLRNAMYV-LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
            + GK  +A  V L + +   + P+L   N+ I  L+       A     +M+ AG TP+V
Sbjct: 764  KHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDV 823

Query: 247  LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK----EKRIKEVRD 302
             TYN  +       +IK+   L +EM  +GC P+ +++  V+  L K    +K I    D
Sbjct: 824  FTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYD 883

Query: 303  LMEKMVNDSNLFHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
            LM    + +   +          GR+EEAK+   +M   GC+P+   Y  ++NGF + G+
Sbjct: 884  LMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGD 943

Query: 355  LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
            ++ A ++ ++M   G +P+  SY+  ++ LC  GK  +A       +     P+ + Y++
Sbjct: 944  VETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNL 1003

Query: 415  VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
            +++GL R  ++ EA  +  EM  +G  P     N LI +L   G ++ A K  +E   KG
Sbjct: 1004 MINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKG 1063

Query: 475  CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
               NV  + +LIRG    G+ + A ++   M +    P+T T+  +
Sbjct: 1064 LEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 156/356 (43%), Gaps = 4/356 (1%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           R+E+   + N M +      + TY  +       G L +A   L++M   G   N  SY 
Sbjct: 137 RVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYI 196

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++ L  +G   EA ++      E   P+  TYS +M  L +   +     +++EM   
Sbjct: 197 GLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESL 256

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P      + I+ L R GK+D A   ++   + GC  +VV +T LI   C  G L  A
Sbjct: 257 GLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNA 316

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             L   M      PD VTY T++D  S +G ++   E   +M + G +P VVT+  +I  
Sbjct: 317 KELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDA 376

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
            C+VG+V++    L+ M  KQ        YN +I  L     L+EA ++   +     + 
Sbjct: 377 LCKVGKVDEAFGTLDVM-KKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLET 435

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
            A T  + ++ Y   G    A K   +M    ++P++  C      L  +G+ EEA
Sbjct: 436 TAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEA 491



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 129/290 (44%), Gaps = 37/290 (12%)

Query: 102  LLRSLKPRQIC------AVLRSQA-DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKT 154
            L R  KP  I        +++S + D+ + L   Y+      +   P  Y  +++ L K 
Sbjct: 850  LFRGCKPNTITHNIVIFGLVKSNSLDKAIDL---YYDLMSGDFSPTPWTYGPLIDGLLKL 906

Query: 155  KLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
               + AK+    M   G  C P    ++ LM  + + G +  A  +   M K  + P+L 
Sbjct: 907  GRLEEAKQFFEEMLDYG--CMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLK 964

Query: 213  ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
              +  +  L +  K+  AL + E ++L+G+ P+++ YN +I G     R+++A+ L DEM
Sbjct: 965  SYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024

Query: 273  PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQ 332
              +G +PD  +Y  ++  L                          G +EEA ++  ++  
Sbjct: 1025 RNRGITPDLYTYNALILNL-----------------------GIAGMVEEAGKMYEELQL 1061

Query: 333  MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
             G  P+V TY A++ G    G  D+A  + ++M   GC+PNT ++    N
Sbjct: 1062 KGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 131/336 (38%), Gaps = 62/336 (18%)

Query: 144  YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSM 201
            Y  +++ L K +L + A  +   M   G  C P+ F+Y   + A  ++GK++    +   
Sbjct: 791  YNSLIDGLLKARLTEMAWGLFYKMKNAG--CTPDVFTYNLFLDALGKSGKIKELFDLYEE 848

Query: 202  MQKAAVAPNLLICNTAIHVLVVGNKLAKAL------------------------------ 231
            M      PN +  N  I  LV  N L KA+                              
Sbjct: 849  MLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGR 908

Query: 232  -----RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
                 +F E M   G  PN   YN L+ G+     ++ A +L   M  +G  PD  SY  
Sbjct: 909  LEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSI 968

Query: 287  VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
            ++  LC              MV         G++++A     ++   G  PD+V Y  ++
Sbjct: 969  MVDCLC--------------MV---------GKVDDALHYFEELKLSGLDPDLVCYNLMI 1005

Query: 347  NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
            NG  R   +++A  +  +M + G  P+  +Y A +  L   G   EA +M    + +   
Sbjct: 1006 NGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLE 1065

Query: 407  PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
            PN  TY+ ++ G    G    A  V ++M+  G  P
Sbjct: 1066 PNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRP 1101


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 244/468 (52%), Gaps = 21/468 (4%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
            T I+      ++ +A   L+ M+  G+  +VL ++ LI+G C   RI +A++    M  
Sbjct: 3   TTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG- 61

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
           + CSP+ ++Y TV+  LCK  RI E  +L + M         + R E         +  G
Sbjct: 62  EECSPNVITYNTVVNGLCKANRIDEGLELFDDM---------EKRYE---------ASHG 103

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C PDV++Y+ V++  C+   +D+A +  ++M   GC PN V+Y++ ++GLC   +  EA 
Sbjct: 104 CEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAY 163

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            ++   + E   P A+ Y+ V++G +R+GK SE  +++  M +KGF    ++ N ++ +L
Sbjct: 164 SLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHAL 223

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            +  + + A +F +  L  G   NVV +   + G C+ G ++EA  +L +M   K  PD 
Sbjct: 224 WKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDV 283

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           +TY++IID   K GR+++A ++  +M+    +P  VT+ T++H + +  +  +  ++ E 
Sbjct: 284 ITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHED 343

Query: 575 MLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M++         YN +++ +C    +E A +I  K+ R   + DA+T   L++       
Sbjct: 344 MVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARR 403

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
              A +    M   N++P+  +C  + E L  +G+ +EA +++   VE
Sbjct: 404 VDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE 451



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 237/496 (47%), Gaps = 66/496 (13%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ ++  + +AG++  A  +L  M++  V  ++L+ +T I  L    ++ +AL   + M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK-----GCSPDKVSYYTVMGYLCK 293
               +PNV+TYN ++ G C  +RI + ++L D+M  +     GC PD +SY TV+  LCK
Sbjct: 62  -EECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 294 EKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
            +R+                       ++A E   +M  +GC P+VVTY+++++G C+V 
Sbjct: 121 AQRV-----------------------DKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVD 157

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            +D+A  +L Q+      P  + Y A +NG    GK  E  E++   +E+ +  N I ++
Sbjct: 158 RVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFN 217

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++H L +  +  +AC     ++K G  P  V  N+ +  LC+ GK+D A + + E +  
Sbjct: 218 AMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVES 277

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
               +V+ ++S+I GFC+ G +++A  +   M + +  P  VT+ T++   S++ +  EA
Sbjct: 278 KVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREA 337

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK------------- 580
             +   M++ G +P + TY  ++   C    VE  L++  KM  K++             
Sbjct: 338 FRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQC 397

Query: 581 -CRT--------------AYNQV---------IENLCSFGYLEEAGKILGKVLRTASKAD 616
            CR               A N V         +E LC  G ++EA  +L  V+      +
Sbjct: 398 LCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGE 457

Query: 617 ASTCHVLVESYLNKGI 632
                 ++E  + KG+
Sbjct: 458 PDEAVEVIEQMVLKGV 473



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 222/509 (43%), Gaps = 79/509 (15%)

Query: 148 LEILSKTKLCQGAKRVLRL------MARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVL 199
           +++L  + L QG  R  R+          G EC P   +Y  V     +A ++   + + 
Sbjct: 32  MDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEGLELF 91

Query: 200 SMMQKAAVA-----PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
             M+K   A     P+++  +T I  L    ++ KA  + +RM+  G  PNV+TY+ LI 
Sbjct: 92  DDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLID 151

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------- 307
           G C + R+ +A  L+ ++  +   P  + Y  V+    ++ +  E  +L+  M       
Sbjct: 152 GLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGI 211

Query: 308 --VNDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
             ++ + + H        E+A +   ++ + G  P+VVTY   V+G C+ G++D+A ++L
Sbjct: 212 NIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRIL 271

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            +M      P+ ++Y++ ++G C  G+  +A ++          P+ +T+  ++HG    
Sbjct: 272 LEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEH 331

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLL-------------------------------- 450
            K  EA  V  +MV  GF P     N+L                                
Sbjct: 332 KKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTY 391

Query: 451 ---IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY- 506
              IQ LCR  ++D AK+F+          N     +L+   C++G+++EA S+LD++  
Sbjct: 392 APLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE 451

Query: 507 LCKKD------------------PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +CK                    PD  TY  ++ +L    RV+ A     KM S+G  P 
Sbjct: 452 ICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPG 511

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           +VTY  +I   C     +D  ++ E M++
Sbjct: 512 LVTYTLLIGEACSADMADDAFRIFEAMVA 540



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 171/337 (50%), Gaps = 17/337 (5%)

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           YT V+NGFC+ G++DQA ++L +M   G K + + ++  + GLC  G+  EA E   +  
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK-----GFFPTPVEINLLIQSLCR 456
           EE  +PN ITY+ V++GL +  ++ E  ++  +M K+     G  P  +  + +I +LC+
Sbjct: 62  EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD--PDT 514
             ++D A ++ +     GCA NVV ++SLI G C+   ++EA SLL  M L  +D  P  
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLL--MQLKGEDMVPRA 178

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           + Y  +++   + G+  E  EL++ M  KG    ++ +  ++H   +    E   +  E+
Sbjct: 179 MYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFER 238

Query: 575 ML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           +L   K+     YN  +  LC  G ++EA +IL +++ +    D  T   +++ +   G 
Sbjct: 239 LLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGR 298

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
              A  V  RM     IP       V+   +L G SE
Sbjct: 299 MDKADDVFTRMMVHECIP-----HPVTFMTLLHGFSE 330



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 135/333 (40%), Gaps = 36/333 (10%)

Query: 124 ALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           A QFF   +R  +    P  + Y + +  L K      A R+L  M    +      +S 
Sbjct: 232 ACQFF---ERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSS 288

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           ++  + +AG++  A  V + M      P+ +   T +H      K  +A R  E M  AG
Sbjct: 289 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 348

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             P + TYN L+   C    ++ A+++  +M  K   PD  +Y  ++  LC+ +R+ E +
Sbjct: 349 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAK 408

Query: 302 DLMEKMVNDS------------NLFHDQGRI-------------------EEAKELVNQM 330
           + ++ M  D+             +   QG +                   +EA E++ QM
Sbjct: 409 EFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQM 468

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              G  PD  TY AV+   C +  +D A    ++M   GC P  V+YT  +   C    +
Sbjct: 469 VLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMA 528

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            +A  +        +TP A T   +   LR  G
Sbjct: 529 DDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 561



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 8/208 (3%)

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +T++I GFC+ G +++A  LLD+M       D + ++T+I  L + GR++EA E   K +
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALE-QFKSM 60

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR-------TAYNQVIENLCS 594
            +   P V+TY TV++  C+  R+++ L+L + M  + +          +Y+ VI+ LC 
Sbjct: 61  GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
              +++A +   ++       +  T   L++          AY +  ++   +++P    
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERG 682
              V      +GK  E   L+L   E+G
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKG 208


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 245/510 (48%), Gaps = 26/510 (5%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A+  F    R  R R   I +  +  ++++TK       + + M  +GI       S ++
Sbjct: 56  AVDLFQEMTRS-RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
               R  KL  A   +  + K    P+ +  +T I+ L +  ++++AL  ++RM   G  
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P ++T N L+ G C   ++ DA+ LID M   G  P++V+Y  V+  +CK          
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK---------- 224

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                         G+   A EL+ +M +     D V Y+ +++G C+ G LD A  +  
Sbjct: 225 -------------SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   G K + + YT  + G C+ G+  +  +++    +   TP+ + +S ++    +EG
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           KL EA ++ +EM+++G  P  V    LI   C+E ++D A   +   ++KGC  N+  F 
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            LI G+C+   +++ L L   M L     DTVTY T+I    + G++E A EL  +M+S+
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-LSKQKCRTA-YNQVIENLCSFGYLEEA 601
            + P +V+Y+ ++   C  G  E  L++ EK+  SK +     YN +I  +C+   +++A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKG 631
             +   +     K D  T ++++     KG
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 252/504 (50%), Gaps = 14/504 (2%)

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
           +A+ +   M ++   P L+  +    V+    +    L   ++M+L GI  N+ T + +I
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-- 311
              C   ++  A   + ++   G  PD V++ T++  LC E R+ E  +L+++MV     
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 312 ----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                     N     G++ +A  L+++M + G  P+ VTY  V+   C+ G+   A ++
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L++M     K + V Y+  ++GLC +G    A  + N  E + +  + I Y+ ++ G   
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            G+  +   ++R+M+K+   P  V  + LI    +EGK+  A++  +E + +G + + V 
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +TSLI GFC++  L++A  +LD M      P+  T+  +I+   K   +++  EL  KM 
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLE 599
            +G+V   VTY T+I  +C++G++E   +L ++M+S++      +Y  +++ LC  G  E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           +A +I  K+ ++  + D    ++++    N      A+ + C +  + + PD+K    + 
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534

Query: 660 ERLILEGKSEEADTLMLRFVERGH 683
             L  +G   EAD L  +  E GH
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGH 558



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 229/495 (46%), Gaps = 38/495 (7%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           ++ + + Y  +L+++ K+     A  +LR M  R I+     +S ++    + G L NA 
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            + + M+      +++I  T I       +     + L  M    ITP+V+ ++ LI  +
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
               ++++A +L  EM  +G SPD V+Y +++   CKE ++ +   +++ MV+       
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  N +     I++  EL  +MS  G + D VTY  ++ GFC +G+L+ AK++ Q+
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M     +P+ VSY   L+GLC NG+  +A E+    E+     +   Y++++HG+    K
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + +A D+   +  KG  P     N++I  LC++G +  A    ++    G + N   +  
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567

Query: 485 LIRGFCQKGD-------LEE---------------ALSLLDDMYLCKKDPDTVTYTTIID 522
           LIR    +GD       +EE               ALS L  M     +PD  T+TT++ 
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLR 627

Query: 523 A--LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-- 578
              L +N  V +A  L   M + G  P VVTY TVI        +  +  +L++M  +  
Sbjct: 628 PFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGC 687

Query: 579 QKCRTAYNQVIENLC 593
           Q      +  I  LC
Sbjct: 688 QPNAVTKSTFISGLC 702



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 5/272 (1%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R R D + Y ++L+ L      + A  +   + +  +E     ++ ++     A K+ +A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +   +    V P++   N  I  L     L++A     +M+  G +PN  TYN LI+ 
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME-KMVNDSNLF 314
           +        + KLI+E+   G S D  +    +  L +  +     D+     +      
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCL 631

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
            +   + +A  L   M  MG  P+VVTY  V+ G      + Q   +L QM+  GC+PN 
Sbjct: 632 EENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNA 691

Query: 375 VSYTAFLNGLC----HNGKSLEAREMINTSEE 402
           V+ + F++GLC    H    L  R+M N +E+
Sbjct: 692 VTKSTFISGLCKQDLHGSAILLLRKMENDNED 723



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 130/302 (43%), Gaps = 38/302 (12%)

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           K  +A D+ +EM +    P  ++ + L   + R  + D      ++   KG A N+   +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            +I   C+   L  A S +  +     +PDTVT++T+I+ L   GRV EA EL+ +M+  
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS--------------KQKCRTA----- 584
           G  PT++T   +++  C  G+V D + L+++M+               K  C++      
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 585 ------------------YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
                             Y+ +I+ LC  G L+ A  +  ++     KAD      L+  
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           +   G      K+   M  R + PD+     + +  + EGK  EA+ L    ++RG I P
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG-ISP 350

Query: 687 KS 688
            +
Sbjct: 351 DT 352


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 236/499 (47%), Gaps = 33/499 (6%)

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           CN  I V V  N+   A+    +M++  I  N+ ++N LIK +CD H++  ++    ++ 
Sbjct: 109 CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL----FHDQ------------ 317
             G  PD V++ T++  LC E RI E   L   MV    L      DQ            
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228

Query: 318 -----------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                      GR+ EA  LVN+M   G   DVVTY  +VNG C++G+   A  +L +M 
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
               KP+ V Y+A ++ LC +G   +A+ + +   E+   PN  TY+ ++ G    G+ S
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A  ++R+M+++   P  +  N LI +  +EGK+  A+K   E L++    + V + S+I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            GFC+    ++A  + D M      PD VT+ TIID   +  RV+E  +L+ ++  +GLV
Sbjct: 409 YGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKI 604
               TY T+IH +C+V  +     L ++M+S   C      N ++   C    LEEA ++
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
              +  +    D    ++++           A+ + C +    + PD++    +      
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584

Query: 665 EGKSEEADTLMLRFVERGH 683
           +    +A+ L  +  + GH
Sbjct: 585 KSAISDANVLFHKMKDNGH 603



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 130/531 (24%), Positives = 241/531 (45%), Gaps = 70/531 (13%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  + R M  R I     +F+ L+  +    KL  ++     + K    P+++  NT +H
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 220 VLVVGNKLAKALR---------FLERMQL------AGITPNVLTYNCLIKGYCDLHRIKD 264
            L + +++++AL          FLE + L       G+TP V+T+N LI G C   R+ +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------- 316
           A  L+++M  KG   D V+Y T++  +CK    K   +L+ KM  ++++  D        
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM-EETHIKPDVVIYSAII 303

Query: 317 -----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC--------------------- 350
                 G   +A+ L ++M + G  P+V TY  +++GFC                     
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363

Query: 351 --------------RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
                         + G+L +A+K+  +M H    P+TV+Y + + G C + +  +A+ M
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
            +       +P+ +T++ ++    R  ++ E   ++RE+ ++G        N LI   C 
Sbjct: 424 FDL----MASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
              ++ A+   QE ++ G   + +    L+ GFC+   LEEAL L + + + K D DTV 
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y  II  + K  +V+EA +L   +   G+ P V TY  +I  +C    + D   L  KM 
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599

Query: 577 SK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
               +   + YN +I      G ++++ +++ ++       DA T  ++ +
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 193/407 (47%), Gaps = 9/407 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++  + K    + A  +L  M    I+     +S ++    + G   +A Y+ 
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S M +  +APN+   N  I       + + A R L  M    I P+VLT+N LI      
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            ++ +A KL DEM  +   PD V+Y +++   CK  R  + + + + M +          
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           +++    R++E  +L+ ++S+ G + +  TY  +++GFC V  L+ A+ + Q+M  HG  
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+T++    L G C N K  EA E+    +      + + Y++++HG+ +  K+ EA D+
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
              +   G  P     N++I   C +  +  A     +  + G   +   + +LIRG  +
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            G++++++ L+ +M       D  T   + D ++ +GR++++   M+
Sbjct: 620 AGEIDKSIELISEMRSNGFSGDAFTIKMVADLIT-DGRLDKSFSDML 665



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 115/279 (41%), Gaps = 18/279 (6%)

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L +A D    MV+   F T V+ N +I    R  + D A    ++   +   +N+ +F  
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE------------- 531
           LI+ FC    L  +LS    +      PD VT+ T++  L    R+              
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 532 --EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
             EA  L  +M+  GL P V+T+ T+I+  C  GRV +   L+ KM+ K        Y  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           ++  +C  G  + A  +L K+  T  K D      +++     G    A  +   M  + 
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           + P++     + +     G+  +A  L+   +ER  I P
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINP 364


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 157/635 (24%), Positives = 291/635 (45%), Gaps = 55/635 (8%)

Query: 104 RSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
           +SL P+ +  +L+S+ + R A   F  A R   Y H  +VY+ +L  LS+T++     R+
Sbjct: 6   KSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRI 65

Query: 164 LRLM----------------------------------ARRGIECRPEAFSY--LMVAYS 187
           + L+                                   R    C P   SY  L+ A+ 
Sbjct: 66  VELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
            A +      + +  + A VAPNL   N  I +     +  KA  FL+ M   G  P+V 
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           +Y+ +I       ++ DA++L DEM  +G +PD   Y  ++    KEK  K   +L +++
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245

Query: 308 VNDSNLFHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
           + DS+++ +              GR+++  ++  +M Q     D+ TY+++++G C  G 
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           +D+A+ +  ++       + V+Y   L G C  GK  E+ E+    E +  + N ++Y++
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK-NSVNIVSYNI 364

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ GL   GK+ EA  + R M  KG+        + I  LC  G ++ A   MQE  + G
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
             ++V  + S+I   C+K  LEEA +L+ +M     + ++     +I  L ++ R+ EA+
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS 484

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS---KQKCRTAYNQVIEN 591
             + +M   G  PTVV+Y  +I   C+ G+  +    +++ML    K   +T Y+ ++  
Sbjct: 485 FFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT-YSILLCG 543

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC    ++ A ++  + L++  + D    ++L+    + G    A  V   M +RN   +
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603

Query: 652 LKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           L     + E     G S  A T++  ++ +  +QP
Sbjct: 604 LVTYNTLMEGFFKVGDSNRA-TVIWGYMYKMGLQP 637



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 197/429 (45%), Gaps = 17/429 (3%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           +M+  LSK        ++   M +   E     +S L+     AG +  A  V + + + 
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
             + +++  NT +       K+ ++L     M+    + N+++YN LIKG  +  +I +A
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEA 378

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH---------- 315
             +   MP KG + DK +Y   +  LC    + +   +M+++ +                
Sbjct: 379 TMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDC 438

Query: 316 --DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
              + R+EEA  LV +MS+ G   +     A++ G  R   L +A   L++M  +GC+P 
Sbjct: 439 LCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPT 498

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            VSY   + GLC  GK  EA   +    E  W P+  TYS+++ GL R+ K+  A ++  
Sbjct: 499 VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWH 558

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           + ++ G     +  N+LI  LC  GK+D A   M    ++ C  N+V + +L+ GF + G
Sbjct: 559 QFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY- 552
           D   A  +   MY     PD ++Y TI+  L     V  A E      + G+ PTV T+ 
Sbjct: 619 DSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWN 678

Query: 553 ---RTVIHR 558
              R V++R
Sbjct: 679 ILVRAVVNR 687



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 138/318 (43%), Gaps = 23/318 (7%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y  D   Y + +  L        A  V++ +   G      A++ ++    +  +L  A 
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEAS 449

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            ++  M K  V  N  +CN  I  L+  ++L +A  FL  M   G  P V++YN LI G 
Sbjct: 450 NLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGL 509

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   +  +A   + EM   G  PD  +Y  ++  LC++++I    DL             
Sbjct: 510 CKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI----DL------------- 552

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
                 A EL +Q  Q G   DV+ +  +++G C VG+LD A  ++  M H  C  N V+
Sbjct: 553 ------ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   + G    G S  A  +     +    P+ I+Y+ +M GL     +S A +   +  
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666

Query: 437 KKGFFPTPVEINLLIQSL 454
             G FPT    N+L++++
Sbjct: 667 NHGIFPTVYTWNILVRAV 684



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 164/401 (40%), Gaps = 50/401 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++  L        A+ V   +  R        ++ ++  + R GK++ ++ + 
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M+    + N++  N  I  L+   K+ +A      M   G   +  TY   I G C  
Sbjct: 349 RIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
             +  A+ ++ E+   G   D  +Y +++  LCK+KR++E  +L+++M            
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                 L  D  R+ EA   + +M + GC P VV+Y  ++ G C+ G+  +A   +++M 
Sbjct: 468 NALIGGLIRDS-RLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526

Query: 367 HHGCKPNTVSYTAFLNGLC--------------------------HN---------GKSL 391
            +G KP+  +Y+  L GLC                          HN         GK  
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLD 586

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           +A  ++   E    T N +TY+ +M G  + G  + A  +   M K G  P  +  N ++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           + LC    +  A +F  +  N G    V  +  L+R    +
Sbjct: 647 KGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/523 (28%), Positives = 257/523 (49%), Gaps = 39/523 (7%)

Query: 142 IVYYMMLE--ILSKTKLCQGAKRVLRLMARRG-------------IECR--PEAFSY--L 182
           +V+Y M+   +L   K C    RVLRL+  R              +EC   P   +Y  +
Sbjct: 152 LVFYKMVSKGLLPDVKNCN---RVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTM 208

Query: 183 MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
           + ++ + G ++ A+ +L  MQ    +PN +  N  ++ L    ++ +A   ++ M   G+
Sbjct: 209 LDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGL 268

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
             +V TY+ LI+GYC+  +I++A +L +EM  +G  P  V+Y T+M  LCK  R+ + R 
Sbjct: 269 EVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARK 328

Query: 303 LMEKMVNDSNLFHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
           L++ MVN  NL  D              G I EA  L  ++      P VVTY  +++G 
Sbjct: 329 LLDVMVN-KNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGL 387

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           CR+G+LD A ++  +M  HG  P+  ++T F+ G C  G    A+E+ +        P+ 
Sbjct: 388 CRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDR 447

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
             Y   + G  + G  S+A  +  EM+ +GF P  +  N+ I  L + G +  A + +++
Sbjct: 448 FAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKK 507

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            L  G   + V +TS+I      G L +A +L  +M      P  VTYT +I + +  GR
Sbjct: 508 MLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGR 567

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
           ++ A     +M  KG+ P V+TY  +I+  C+V +++       +M +K     +  Y  
Sbjct: 568 LKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTI 627

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           +I   C+ G+ +EA ++   +L    + D+ T   L++ +LNK
Sbjct: 628 LINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLK-HLNK 669



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 254/550 (46%), Gaps = 47/550 (8%)

Query: 107 KPRQICAVLRSQADERV-ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR 165
           +P+ +  VL +  +  V AL+FF WA+RQ  ++   I Y ++L+IL++  L + A     
Sbjct: 46  EPKLLVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSA----- 100

Query: 166 LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
                          Y ++    + K+ N +  +    + ++    LI +  + + V  +
Sbjct: 101 ---------------YCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKS 145

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL-HRIKDAIKLIDEMPLKGCSPDKVSY 284
            L K L    +M   G+ P+V   N +++   D  + I  A ++ + M   G  P  V+Y
Sbjct: 146 LLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTY 205

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            T++   CK                       +G ++EA +L+ QM  MGC P+ VTY  
Sbjct: 206 NTMLDSFCK-----------------------KGMVQEALQLLFQMQAMGCSPNDVTYNV 242

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +VNG    GE++QAK+++Q M   G + +  +Y   + G C  G+  EA  +        
Sbjct: 243 LVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRG 302

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P  +TY+ +M+GL + G++S+A  ++  MV K   P  V  N LI    R G +  A 
Sbjct: 303 AVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAF 362

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
               E   +  A +VV + +LI G C+ GDL+ A+ L D+M     DPD  T+TT +   
Sbjct: 363 LLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGF 422

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCR 582
            K G +  A EL  +ML++GL P    Y T I    ++G       + E+ML++      
Sbjct: 423 CKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDL 482

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             YN  I+ L   G L+EA +++ K+L      D  T   ++ ++L  G    A  +   
Sbjct: 483 ITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLE 542

Query: 643 MFNRNLIPDL 652
           M ++ + P +
Sbjct: 543 MLSKGIFPSV 552



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 188/389 (48%), Gaps = 12/389 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+   M  RG       ++ +M    + G++ +A  +L +M    + P+L+  NT I+
Sbjct: 291 ASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIY 350

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A      ++   + P+V+TYN LI G C L  +  A++L DEM   G  P
Sbjct: 351 GYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDP 410

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNLFHDQGRI---------EEAKELV 327
           D  ++ T +   CK   +   ++L ++M+N     + F    RI          +A  + 
Sbjct: 411 DVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQ 470

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M   G  PD++TY   ++G  ++G L +A +++++M ++G  P+ V+YT+ ++     
Sbjct: 471 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 530

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G   +AR +      +   P+ +TY+V++H     G+L  A     EM +KG  P  +  
Sbjct: 531 GHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 590

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N LI  LC+  KMD A  F  E   KG + N   +T LI   C  G  +EAL L  DM  
Sbjct: 591 NALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 650

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            +  PD+ T+ +++  L+K+ ++     L
Sbjct: 651 REIQPDSCTHRSLLKHLNKDYKLHVVRHL 679



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 79/170 (46%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y + ++ L K    + A  +++ M   G+      ++ ++ A+  AG LR A  + 
Sbjct: 481 DLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALF 540

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    + P+++     IH   V  +L  A+     M   G+ PNV+TYN LI G C +
Sbjct: 541 LEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKV 600

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
            ++  A     EM  KG SP+K +Y  ++   C     +E   L + M++
Sbjct: 601 RKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 650


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 158/598 (26%), Positives = 276/598 (46%), Gaps = 92/598 (15%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS--YLMVAYSRAGKLRNAMY 197
           D + Y  M++   K      A R  RL+   G+E  PE F+   L++ Y R G+LR A +
Sbjct: 67  DTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLE--PETFTCNALVLGYCRTGELRKACW 124

Query: 198 VLSMM-------------------------QKAAV----------APNLLICNTAIHVLV 222
           +  MM                         +KA V          +PN+      I  L 
Sbjct: 125 LFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLC 184

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              ++  A    + M   G+ P+V+TYN +I GY  L R+ DA+K+ + M   GC PD  
Sbjct: 185 KSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDW 244

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNL---------FHD-------- 316
           +Y T++  LC +K  +E  +L+   V +         +NL         F D        
Sbjct: 245 TYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 303

Query: 317 ---------------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                                + R++EAKEL+N++S  G +P+V+TYT++++G+C+ G++
Sbjct: 304 MSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKV 363

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D A ++L+ M   GC+PN  +Y + + GL  + K  +A  ++   +++   PN ITY+ +
Sbjct: 364 DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTL 423

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + G   E     A  +   M + G  P      +L  +LC+ G+ + A  F+   + KG 
Sbjct: 424 LQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGV 480

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
           A+  V +T+LI GF + G+ + A +L++ M      PD+ TY+ ++ AL K  R+ EA  
Sbjct: 481 ALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALP 540

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
           ++ +M  +G+  T+  Y  +I    + G+ +   ++  +M S   +   T Y   I + C
Sbjct: 541 ILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 600

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
             G LE+A  ++ K+ R     D  T ++L++   + G    A+    RM   +  P+
Sbjct: 601 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 658



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 234/519 (45%), Gaps = 27/519 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  V+  ++  L K    + AK +L  ++  G+      ++ ++  Y ++GK+  A+ VL
Sbjct: 311 DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 370

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            MM++    PN    N+ ++ LV   KL KA+  L +MQ  GI PNV+TY  L++G CD 
Sbjct: 371 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE 430

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD-LMEKMVNDSNL----- 313
           H   +A +L + M   G  PD+ +Y  +   LCK  R +E    ++ K V  + +     
Sbjct: 431 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTL 490

Query: 314 ---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
              F   G  + A  L+ +M   GC PD  TY+ +++  C+   L++A  +L QM   G 
Sbjct: 491 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 550

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           K    +YT  ++ +   GK   A+ M N        P+A TY+V ++   +EG+L +A D
Sbjct: 551 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 610

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR--- 487
           ++ +M ++G  P  V  N+LI      G +D A   ++  +   C  N   +  L++   
Sbjct: 611 LILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLL 670

Query: 488 -------------GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
                        G     +L+    LL+ M     +P   TY+++I    K GR+EEA 
Sbjct: 671 KGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC 730

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENL 592
            L+  M  KGL P    Y  +I   C     E  L  +  M     Q    +Y  ++  L
Sbjct: 731 LLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGL 790

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           C+ G  E+   +   +L      D     +L +  L  G
Sbjct: 791 CNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 829



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 237/506 (46%), Gaps = 18/506 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A + +R      +   P+ +++ + + +R         V S + +  + P+ +  NT I 
Sbjct: 17  AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 76

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  L  A R+   +   G+ P   T N L+ GYC    ++ A  L   MPL GC  
Sbjct: 77  SYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQR 136

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
           ++ SY  ++  LC  K +++   L   M  D             +     GR+ +A+ L 
Sbjct: 137 NEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 196

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           + M Q G +P V+TY A++ G+ ++G ++ A K+ + M  +GC P+  +Y   + GLC +
Sbjct: 197 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-D 255

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            K+ EA E++N + +E +TP  +T++ +++G     K  +A  +  +M+           
Sbjct: 256 QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 315

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             LI SL ++ ++  AK+ + E    G   NV+ +TS+I G+C+ G ++ AL +L  M  
Sbjct: 316 GKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 375

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+  TY +++  L K+ ++ +A  L+ KM   G++P V+TY T++   C     ++
Sbjct: 376 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 435

Query: 568 LLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
             +L E M     +    AY  + + LC  G  EEA   + +     +K   +T   L++
Sbjct: 436 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTT---LID 492

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPD 651
            +   G    A  +  RM +    PD
Sbjct: 493 GFSKAGNTDFAATLIERMIDEGCTPD 518



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/537 (24%), Positives = 230/537 (42%), Gaps = 68/537 (12%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+ +L    + G       F+ L+  Y  A K  +A+ + + M  +    +L +    I+
Sbjct: 261 AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLIN 320

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L+  ++L +A   L  +   G+ PNV+TY  +I GYC   ++  A++++  M   GC P
Sbjct: 321 SLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQP 380

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH------------DQGRIEEAKELV 327
           +  +Y ++M  L K+K++ +   L+ KM  D  + +            D+   + A  L 
Sbjct: 381 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 440

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
             M Q G  PD   Y  + +  C+ G  ++A   + +    G     V YT  ++G    
Sbjct: 441 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKA 497

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G +  A  +I    +E  TP++ TYSV++H L ++ +L+EA  ++ +M  +G   T    
Sbjct: 498 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 557

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            +LI  + REGK D AK+   E  + G   +   +T  I  +C++G LE+A  L+  M  
Sbjct: 558 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 617

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEA---------------------------------- 533
               PD VTY  +ID     G ++ A                                  
Sbjct: 618 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 677

Query: 534 -----------------TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
                             +L+ +M+  GL PTV TY ++I  +C+ GR+E+   LL+ M 
Sbjct: 678 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 737

Query: 577 SK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            K        Y  +I+  C   + E+A   +  +     +    +  +LV    N+G
Sbjct: 738 GKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEG 794



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 213/521 (40%), Gaps = 105/521 (20%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           I Y  +++   K+     A  VL++M R G  C+P A++Y  LM    +  KL  AM +L
Sbjct: 348 ITYTSIIDGYCKSGKVDIALEVLKMMERDG--CQPNAWTYNSLMYGLVKDKKLHKAMALL 405

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN-----VLT------ 248
           + MQK  + PN++   T +      +    A R  E M+  G+ P+     VLT      
Sbjct: 406 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 465

Query: 249 ---------------------YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
                                Y  LI G+        A  LI+ M  +GC+PD  +Y  +
Sbjct: 466 GRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVL 525

Query: 288 MGYLCKEKRIKEVRDLMEKM--------VNDSNLFHDQ----GRIEEAKELVNQMSQMGC 335
           +  LCK+KR+ E   ++++M        +    +  D+    G+ + AK + N+M+  G 
Sbjct: 526 LHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH 585

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA-- 393
            P   TYT  +N +C+ G L+ A+ ++ +M   G  P+ V+Y   ++G  H G    A  
Sbjct: 586 KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFS 645

Query: 394 --REMINTS-EEEWWT-------------------------------------------- 406
             + M+  S E  +WT                                            
Sbjct: 646 TLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHG 705

Query: 407 --PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P   TYS ++ G  + G+L EAC ++  M  KG  P      LLI+  C     + A 
Sbjct: 706 LNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKAL 765

Query: 465 KF---MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            F   M EC   G    + ++  L+ G C +GD E+  SL  D+     + D V +  + 
Sbjct: 766 SFVSIMSEC---GFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 822

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           D L K G V+   +++  M  +    +  TY  V ++  +V
Sbjct: 823 DGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKMHEV 863



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 219/488 (44%), Gaps = 63/488 (12%)

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           A A++ + R   A +  +   YN  ++        +   ++  ++   G  PD V+Y T+
Sbjct: 15  ADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTM 74

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +   CKE                       G +  A      + + G  P+  T  A+V 
Sbjct: 75  IKSYCKE-----------------------GDLTTAHRYFRLLLEGGLEPETFTCNALVL 111

Query: 348 GFCRVGELDQAKKMLQQM---------YHH--------------------------GCKP 372
           G+CR GEL +A  +   M         Y +                          GC P
Sbjct: 112 GYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSP 171

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N  ++T  ++GLC +G+  +AR + +   +    P+ +TY+ ++ G  + G++++A  + 
Sbjct: 172 NVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIK 231

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             M K G  P     N LI  LC + K + A++ +   + +G    VV FT+LI G+C  
Sbjct: 232 ELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 290

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
              ++AL + + M   K   D   +  +I++L K  R++EA EL+ ++ + GLVP V+TY
Sbjct: 291 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY 350

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVL 609
            ++I  YC+ G+V+  L++L KM+ +  C+     YN ++  L     L +A  +L K+ 
Sbjct: 351 TSIIDGYCKSGKVDIALEVL-KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ 409

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
           +     +  T   L++   ++     A+++   M    L PD      +++ L   G++E
Sbjct: 410 KDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAE 469

Query: 670 EADTLMLR 677
           EA + ++R
Sbjct: 470 EAYSFIVR 477



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 146/322 (45%), Gaps = 7/322 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++L  L K K    A  +L  M+ RGI+C   A++ L+    R GK  +A  + 
Sbjct: 518 DSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMY 577

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M  +   P+       I+      +L  A   + +M+  G+ P+V+TYN LI G   +
Sbjct: 578 NEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHM 637

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             I  A   +  M    C P+  +Y  ++ +L K   +  VR +      D++   +   
Sbjct: 638 GYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSV------DTSGMWNLIE 690

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++   +L+ +M + G  P V TY++++ GFC+ G L++A  +L  M   G  PN   YT 
Sbjct: 691 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 750

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +   C      +A   ++   E  + P   +Y +++ GL  EG   +   +  ++++ G
Sbjct: 751 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 810

Query: 440 FFPTPVEINLLIQSLCREGKMD 461
           +    V   +L   L + G +D
Sbjct: 811 YNHDEVAWKILNDGLLKAGYVD 832



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 149/380 (39%), Gaps = 38/380 (10%)

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y   +    R    +   ++  Q+   G  P+TV+Y   +   C  G    A        
Sbjct: 36  YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           E    P   T + ++ G  R G+L +AC +   M   G         +LIQ LC    + 
Sbjct: 96  EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 155

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A          GC+ NV  FT LI G C+ G + +A  L D M      P  +TY  +I
Sbjct: 156 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 215

Query: 522 DALSKNGRV----------------------------------EEATELMMKMLSKGLVP 547
              SK GR+                                  EEA EL+   + +G  P
Sbjct: 216 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTP 275

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKI 604
           TVVT+  +I+ YC   + +D L++  KM+S  KC+     + ++I +L     L+EA ++
Sbjct: 276 TVVTFTNLINGYCMAEKFDDALRMKNKMMS-SKCKLDLQVFGKLINSLIKKDRLKEAKEL 334

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
           L ++       +  T   +++ Y   G   +A +V   M      P+      +   L+ 
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394

Query: 665 EGKSEEADTLMLRFVERGHI 684
           + K  +A  L+ +  + G I
Sbjct: 395 DKKLHKAMALLTKMQKDGII 414


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 237/505 (46%), Gaps = 20/505 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D   Y ++L+ L        A  +LR+MA  G  C P+  +Y  V   + + G +  A  
Sbjct: 185 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACD 244

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  + P+L+  ++ +H L     + KA  FL +M   G+ P+  TYN LI GY 
Sbjct: 245 LFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 304

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              + K+A+++  EM      PD V+   +MG LCK  +IKE RD+ + M          
Sbjct: 305 STGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 364

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 N +  +G + +  +L + M   G  PD+ T++ ++  +   G LD+A  +  +M
Sbjct: 365 SYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEM 424

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
             HG KP+ V+YT  +  LC  GK  +A E  N   ++   P+   Y  ++ G    G L
Sbjct: 425 RDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 484

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A +++ E++  G     V  + +I +LC+ G++  A+      +N G   + V ++ L
Sbjct: 485 LKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSML 544

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           + G+C  G +E+AL + D M     +P+ V Y T+++   K GR++E   L  +ML KG+
Sbjct: 545 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 604

Query: 546 VPTVVTYRTVIHRYCQVGRVED----LLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEA 601
            P+ + Y  +I      GR         ++ E  ++  KC   YN V+         +EA
Sbjct: 605 KPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKC--TYNIVLRGFFKNRCFDEA 662

Query: 602 GKILGKVLRTASKADASTCHVLVES 626
             +  ++     K D  T + ++  
Sbjct: 663 IFLFKELRAMNVKIDIITLNTMIAG 687



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 213/464 (45%), Gaps = 57/464 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  ++  L K +    A+  LR M  +G+   P+ ++Y  L+  YS  G+ + A+ 
Sbjct: 257 DLVTYSSVVHALCKARAMGKAEAFLRQMVNKGV--LPDNWTYNNLIYGYSSTGQWKEAVR 314

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG---------------- 241
           V   M++ ++ P+++  N  +  L    K+ +A    + M + G                
Sbjct: 315 VFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYA 374

Query: 242 -------------------ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
                              I P++ T++ LIK Y +   +  A+ + +EM   G  PD V
Sbjct: 375 TKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 434

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEK--------MVNDSNLFH-------DQGRIEEAKELV 327
           +Y TV+  LC   RI ++ D MEK        +  D   +H         G + +AKEL+
Sbjct: 435 TYTTVIAALC---RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI 491

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            ++   G   D+V +++++N  C++G +  A+ +     + G  P+ V Y+  ++G C  
Sbjct: 492 LEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLV 551

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           GK  +A  + +        PN + Y  +++G  + G++ E   + REM++KG  P+ +  
Sbjct: 552 GKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 611

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N++I  L   G+   AK    E    G A+N   +  ++RGF +    +EA+ L  ++  
Sbjct: 612 NIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRA 671

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
                D +T  T+I  + +  RVEEA +L   +   GLVP VVT
Sbjct: 672 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 129/554 (23%), Positives = 230/554 (41%), Gaps = 72/554 (12%)

Query: 175 RPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL--R 232
           RPE    L+    R G       +   +   A AP+   C +       G  LA AL  R
Sbjct: 48  RPEDAHDLLDELQRRGTPVLGRDLNGFLAALARAPSSAACGS-------GPALAVALFNR 100

Query: 233 FLERMQLAGI-TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
              R Q   + +P   TY  L+      HR + A+    ++   G   D +    ++   
Sbjct: 101 AASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGF 160

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           C+ KR  E  D+                      L+++  ++GC+PDV +Y+ ++   C 
Sbjct: 161 CEAKRTDEALDI----------------------LLHRTPELGCVPDVFSYSILLKSLCD 198

Query: 352 VGELDQAKKMLQQMYHHG--CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
            G+  QA  +L+ M   G  C P+ V+YT  ++     G   +A ++     +    P+ 
Sbjct: 199 QGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDL 258

Query: 410 ITYSVVMH-----------------------------------GLRREGKLSEACDVVRE 434
           +TYS V+H                                   G    G+  EA  V +E
Sbjct: 259 VTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKE 318

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M +    P  V +N+L+ SLC+ GK+  A+        KG   +V ++  ++ G+  KG 
Sbjct: 319 MRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGC 378

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           L +   L D M      PD  T++ +I A +  G +++A  +  +M   G+ P VVTY T
Sbjct: 379 LVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTT 438

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           VI   C++G+++D ++   +M+ +     + AY+ +I+  C+ G L +A +++ +++   
Sbjct: 439 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNG 498

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
            + D      ++ +    G  + A  +     N    PD  +   + +   L GK E+A 
Sbjct: 499 MRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKAL 558

Query: 673 TLMLRFVERGHIQP 686
            +    V  G I+P
Sbjct: 559 RVFDAMVSAG-IEP 571



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 36/376 (9%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA-KKMLQQMYHHGCKPNTVSY 377
           R E A     Q+ + G   D++    ++ GFC     D+A   +L +    GC P+  SY
Sbjct: 130 RPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSY 189

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWW--TPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +  L  LC  GKS +A +++    E     +P+ + Y+ V+    +EG +++ACD+ +EM
Sbjct: 190 SILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEM 249

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           V++G  P  V  + ++ +LC+   M  A+ F+++ +NKG   +   + +LI G+   G  
Sbjct: 250 VQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQW 309

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           +EA+ +  +M      PD VT   ++ +L K G+++EA ++   M  KG  P V +Y+ +
Sbjct: 310 KEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIM 369

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
           ++ Y   G + D+  L + ML                                       
Sbjct: 370 LNGYATKGCLVDMTDLFDLMLGD---------------------------------GIAP 396

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           D  T  VL+++Y N G+   A  +   M +  + PD+     V   L   GK ++A    
Sbjct: 397 DIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKF 456

Query: 676 LRFVERGHIQPKSEEH 691
            + +++G    K   H
Sbjct: 457 NQMIDQGVAPDKYAYH 472



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 14/217 (6%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D + +  ++  L K      A+ +  L    G       +S LM  Y   GK+  A+ 
Sbjct: 500 RLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALR 559

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   M  A + PN+++  T ++      ++ + L     M   GI P+ + YN +I G  
Sbjct: 560 VFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 619

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG------------YLCKEKRIKEVR-DLM 304
              R   A     EM   G + +K +Y  V+             +L KE R   V+ D++
Sbjct: 620 VAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDII 679

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
                 + +F  + R+EEAK+L   +S+ G +P VVT
Sbjct: 680 TLNTMIAGMFQTR-RVEEAKDLFASISRSGLVPCVVT 715


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 239/504 (47%), Gaps = 23/504 (4%)

Query: 165 RLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           RL+ R      P AF +  ++ +  ++      +Y+   M+   + PNL+ CN  I+   
Sbjct: 75  RLLRRN---TTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFC 131

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
               +  A     ++   G  P+ +T+  LIKG C   +I+ A    D++   G   D++
Sbjct: 132 QLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQI 191

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ--------------GRIEEAKELVN 328
           SY T++  LCK    +   DL++++  D NL                    + EA +L +
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRV--DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFS 249

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +M   G  PDVVTY+A+++GFC +G+L+ A  +  +M     KP+  ++   +N  C +G
Sbjct: 250 EMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDG 309

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K  E + + +   ++   PN +TY+ +M G     ++++A  +   M + G  P     +
Sbjct: 310 KMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYS 369

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           ++I   C+  K D A    +E   K    +VV ++SLI G  + G +  AL L+D M+  
Sbjct: 370 IMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDR 429

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P   TY +I+DAL K  +V++A  L+ K+  KG+ P + TY  +I   CQ G++ED 
Sbjct: 430 GVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDA 489

Query: 569 LKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            K+ E +L K        Y  +I+  C  G   EA  +L K+       DA T  +++ S
Sbjct: 490 RKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILS 549

Query: 627 YLNKGIPLLAYKVACRMFNRNLIP 650
              K    +A K+   M  R + P
Sbjct: 550 LFKKDENDMAEKLLREMIARGVRP 573



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 262/524 (50%), Gaps = 15/524 (2%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           ++S     +     + +A+ + + + +    P     N  +  LV        L   ++M
Sbjct: 52  SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           +  GI PN++  N LI  +C L  I  A  +  ++   G  PD +++ T++  LC + +I
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQI 171

Query: 298 KEVRDLMEKMV---------NDSNLFHDQGRIEEAK---ELVNQMSQMGCIPDVVTYTAV 345
           ++     +K+V         +   L H   ++ E +   +L+ ++      P+VV Y  +
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++  C+V  +++A  +  +M   G  P+ V+Y+A ++G C  GK  +A ++ N    E  
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENI 291

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+  T++++++   ++GK+ E   V   M+K+G  P  V  N L+   C   +++ AK 
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
                   G   ++ +++ +I GFC+    +EA++L  +M+     PD VTY+++ID LS
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
           K+GR+  A +L+ +M  +G+ PT+ TY +++   C++ +V+  + LL K+  K  Q    
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMY 471

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            Y+ +I+ LC  G LE+A K+   +L      +  T  ++++ +  +G+   A  +  +M
Sbjct: 472 TYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKM 531

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
            +   IPD K  + +   L  + +++ A+ L+   + RG ++P+
Sbjct: 532 EDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG-VRPR 574



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 213/424 (50%), Gaps = 25/424 (5%)

Query: 126 QFFYWADR--QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           Q F + D+     +  D I Y  ++  L K    + A  +L+ +    ++     ++ ++
Sbjct: 173 QAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTII 232

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
            +  +   +  A  + S M    ++P+++  +  I    +  KL  A+    +M L  I 
Sbjct: 233 DSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIK 292

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+V T+N L+  +C   ++K+   + D M  +G  P+ V+Y ++M   C    +KEV   
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC---LVKEVN-- 347

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                             +AK + N M+Q G  PD+ +Y+ ++NGFC++ + D+A  + +
Sbjct: 348 ------------------KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFK 389

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M+     P+ V+Y++ ++GL  +G+   A ++++   +    P   TY+ ++  L +  
Sbjct: 390 EMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIH 449

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           ++ +A  ++ ++  KG  P     ++LI+ LC+ GK++ A+K  +  L KG  +NV  +T
Sbjct: 450 QVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYT 509

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            +I+GFC +G   EAL+LL  M      PD  TY  II +L K    + A +L+ +M+++
Sbjct: 510 IMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 569

Query: 544 GLVP 547
           G+ P
Sbjct: 570 GVRP 573



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 146/294 (49%), Gaps = 28/294 (9%)

Query: 175 RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           +P+ +++  L+ A+ + GK++    V  MM K  + PN +  N+ +    +  ++ KA  
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
               M   G+ P++ +Y+ +I G+C + +  +A+ L  EM  K   PD V+Y +++  L 
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQG-------------------RIEEAKELVNQMSQM 333
           K  RI     L+++M       HD+G                   ++++A  L+ ++   
Sbjct: 412 KSGRISYALQLVDQM-------HDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK 464

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  P++ TY+ ++ G C+ G+L+ A+K+ + +   G   N  +YT  + G C  G   EA
Sbjct: 465 GIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEA 524

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
             +++  E+    P+A TY +++  L ++ +   A  ++REM+ +G  P  + I
Sbjct: 525 LALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIAI 578



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 118/229 (51%), Gaps = 12/229 (5%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           AK +   MA+ G+    +++S ++  + +  K   AM +   M +  + P+++  ++ I 
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    +++ AL+ +++M   G+ P + TYN ++   C +H++  AI L+ ++  KG  P
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQP 468

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEK-MVNDSNL-----------FHDQGRIEEAKELV 327
           +  +Y  ++  LC+  ++++ R + E  +V   NL           F  +G   EA  L+
Sbjct: 469 NMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALL 528

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           ++M   GCIPD  TY  ++    +  E D A+K+L++M   G +P  ++
Sbjct: 529 SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 2/267 (0%)

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
           +   K N +SY++       N    +A  + N       TP A  ++ ++  L +     
Sbjct: 43  YSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYH 102

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
               + ++M  +G  P  V  N+LI   C+ G +  A     + L  G   + + FT+LI
Sbjct: 103 TVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLI 162

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           +G C KG +++A    D +       D ++Y T+I  L K G    A +L+ ++    + 
Sbjct: 163 KGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQ 222

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKI 604
           P VV Y T+I   C+V  V +   L  +M+SK        Y+ +I   C  G L +A  +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282

Query: 605 LGKVLRTASKADASTCHVLVESYLNKG 631
             K++    K D  T ++LV ++   G
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDG 309


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 234/483 (48%), Gaps = 57/483 (11%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
            + +++  L +    + A+ V   M+ +G  C+P  FS   L+  Y RAG   + + +L 
Sbjct: 155 TFNLLISALCEMGYLENAREVFDKMSEKG--CKPNEFSLGILVRGYCRAGLHSHGIDLLD 212

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M+ +   PN +  NT I  L    +  +A + +E+M+  G++P+++T+NC I   C   
Sbjct: 213 EMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSG 272

Query: 261 RIKDAIKLIDEMPLKG----CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           +I +A ++  +M +        P+ V+Y  ++   C E   +E R + + M N   L   
Sbjct: 273 QILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL--- 329

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
                                 + +Y   + G  R G+L +A  +L +M     KPN  S
Sbjct: 330 ---------------------SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYS 368

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   ++GLC  G   +AR ++    E    P+ +TYS ++HG  R GK+ EA  V+REM+
Sbjct: 369 YNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMI 428

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           + G FP     N+L+ SL +EG+   A+  +Q    +G  ++ V   ++I G C+ G+L+
Sbjct: 429 QVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLD 488

Query: 497 EALSLLDDMYL-----------------------CKKDPDTVTYTTIIDALSKNGRVEEA 533
           +A+ ++  M+                         K  PD++TY TII  L K GRV+EA
Sbjct: 489 KAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEA 548

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIEN 591
            + +++M+ K L P  + + T I+ YC+ G++    ++L++M  K   K    YN +I+ 
Sbjct: 549 KKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQG 608

Query: 592 LCS 594
           L S
Sbjct: 609 LGS 611



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 234/518 (45%), Gaps = 43/518 (8%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + + + Y +MLE      + + A+ +   M +        +++  M+   R+GKL  A  
Sbjct: 294 KPNTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHL 352

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L+ M +  + PNL   N  +H L      + A   L  M+ +G+ P+ +TY+ L+ GYC
Sbjct: 353 ILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYC 412

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              +I +A  ++ EM   GC P+  +   ++  L KE R  E  DL++ M+N+     D 
Sbjct: 413 RRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQ-MMNERGYGLDN 471

Query: 318 -------------GRIEEAKELVNQMSQMG-----------------------CIPDVVT 341
                        G +++A E+V+ M   G                       C+PD +T
Sbjct: 472 VTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSIT 531

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y  ++ G C+VG +D+AKK L +M      P+++ +  F+   C  GK   A  ++   E
Sbjct: 532 YATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEME 591

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           ++    +  TY+ ++ GL  E ++ E   ++ EM ++G FP     N +I  L   GK+ 
Sbjct: 592 KKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLK 651

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD-DMYLCKKDPDTVTYTTI 520
            A   + E L KG + N+  F  LI  F +  D   A  L +  + LC        Y+ +
Sbjct: 652 DATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKES--LYSFM 709

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
            + L   G   +A EL    L + L      YR +I + C+ G+++D   +L KM+ KQ 
Sbjct: 710 FNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQY 769

Query: 581 C--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
                ++  VI+ L   G    A +   +++  AS+ D
Sbjct: 770 SFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETD 807



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 229/516 (44%), Gaps = 53/516 (10%)

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           +++   M  A V P     N  I  L     L  A    ++M   G  PN  +   L++G
Sbjct: 138 IWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRG 197

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           YC        I L+DEM   G  P++V+Y TV+  LC E                     
Sbjct: 198 YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGE--------------------- 236

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY---HHGC-K 371
             G+  EA++LV +M ++G  PD+VT+   +   C+ G++ +A ++ + M      G  K
Sbjct: 237 --GQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPK 294

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PNTV+Y   L G C  G   EAR + ++ +    T +  +Y++ M GL R GKL EA  +
Sbjct: 295 PNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSE-TLSLRSYNIWMLGLVRSGKLLEAHLI 353

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           + EM +K   P     N+L+  LC+ G    A+  +      G A + V +++L+ G+C+
Sbjct: 354 LNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCR 413

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           +G + EA  +L +M      P+  T   ++ +L K GR  EA +L+  M  +G     VT
Sbjct: 414 RGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVT 473

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSK----------------------QKC---RTAYN 586
             T+I+  C+ G ++  ++++  M ++                      +KC      Y 
Sbjct: 474 CNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYA 533

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I  LC  G ++EA K L +++      D+      + +Y  +G    A++V   M  +
Sbjct: 534 TIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKK 593

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                L+    + + L  E +  E   LM    ERG
Sbjct: 594 GCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERG 629



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 148/319 (46%), Gaps = 7/319 (2%)

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           KP T ++   ++ LC  G    ARE+ +   E+   PN  +  +++ G  R G  S   D
Sbjct: 150 KPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGID 209

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           ++ EM   G  P  V  N +I SLC EG+   A+K +++    G + ++V F   I   C
Sbjct: 210 LLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALC 269

Query: 491 QKGDLEEALSLLDDMYLCKK----DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           + G + EA  +  DM + ++     P+TVTY  +++     G  EEA  +   M +   +
Sbjct: 270 KSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL 329

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKI 604
            ++ +Y   +    + G++ +   +L +M  K  +    +YN ++  LC +G   +A  I
Sbjct: 330 -SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSI 388

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
           LG +  +    D  T   L+  Y  +G  L A  V   M      P++  C  +   L  
Sbjct: 389 LGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWK 448

Query: 665 EGKSEEADTLMLRFVERGH 683
           EG++ EA+ L+    ERG+
Sbjct: 449 EGRASEAEDLLQMMNERGY 467


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 264/559 (47%), Gaps = 15/559 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++ + K         +L  M  RG       F+ ++VA    G +  A+ + 
Sbjct: 294 DAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLK 353

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M       NL++  + +        L  AL    ++   G+ PN +TY+ LI+G C+ 
Sbjct: 354 EEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 413

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVN--DSNLFH- 315
             I+ A +L  +M L G  P   +  +++ GYL K    +E   L ++ V+   +N+F  
Sbjct: 414 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYL-KAPLWEEASKLFDEAVDCGVANIFTY 472

Query: 316 --------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     G+++EA  L++ M   G +P+VV+Y  ++ G CR G +D A  +   M  
Sbjct: 473 NIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLA 532

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
              KPN V+Y+  ++G    G S +A ++ +        P   T++ +++GL + G++SE
Sbjct: 533 RDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSE 592

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A D ++  +++GF P+ +  N ++    +EG +D A    +E    G + NVV +TSLI 
Sbjct: 593 ARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLIN 652

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC+   ++ AL   D+M     + D   Y+ +ID   K   +E A +L  ++L  GL P
Sbjct: 653 GFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSP 712

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ-KCRTA-YNQVIENLCSFGYLEEAGKIL 605
             + Y ++I  +  +  +E  L   +KM++ +  C    Y  +I+ L   G L  A  + 
Sbjct: 713 NRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLY 772

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            ++L      D  T HVLV    NKG    A K+   M  +N+ P + +   +      E
Sbjct: 773 MEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFRE 832

Query: 666 GKSEEADTLMLRFVERGHI 684
           G  +EA TL    ++RG +
Sbjct: 833 GNLKEAFTLHDEMLDRGLV 851



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 140/587 (23%), Positives = 251/587 (42%), Gaps = 71/587 (12%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR-------- 162
           I A+L    D + AL++F  A+ Q  +      Y ++L IL ++    G  R        
Sbjct: 104 IDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVS 163

Query: 163 -------------VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAP 209
                        ++    R   E     F+YL+ AY RA ++ NA+   + M    V P
Sbjct: 164 GDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIP 223

Query: 210 NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT--------------------- 248
            +   N  +  LV  N + +      +M L GI  +  T                     
Sbjct: 224 WVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYF 283

Query: 249 --------------YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
                         Y+ +I+  C        ++L++EM  +G  P + ++ +V+     +
Sbjct: 284 RETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQ 343

Query: 295 KRIKEVRDLMEKMVN---DSNL---------FHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
             + E   L E+M+N     NL         +  QG ++ A  L N++++ G  P+ VTY
Sbjct: 344 GNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTY 403

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           + ++ G C  G +++A ++  QM  +G  P+  +  + L G        EA ++ + +  
Sbjct: 404 SVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA-V 462

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
           +    N  TY+++M  L + GK+ EAC ++  MV +G  P  V  N +I   CR+G MD 
Sbjct: 463 DCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDM 522

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A     + L +    NVV ++ LI G  +KGD E+AL L D M      P   T+ TII+
Sbjct: 523 ASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIIN 582

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQK 580
            L K G++ EA + +   L +G +P+ +TY +++  + + G ++  L +  +M       
Sbjct: 583 GLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSP 642

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
               Y  +I   C    ++ A K   ++     + D +    L++ +
Sbjct: 643 NVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF 689



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 183/392 (46%), Gaps = 12/392 (3%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            ++ +M    + GK+  A  +L  M    + PN++  N  I        +  A      M
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 530

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
               + PNV+TY+ LI G       + A+ L D+M     +P   ++ T++  LCK  ++
Sbjct: 531 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 590

Query: 298 KEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            E RD ++  + +  +            F  +G I+ A  +  +M + G  P+VVTYT++
Sbjct: 591 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 650

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           +NGFC+   +D A K   +M   G + +  +Y+A ++G C       A+++     E   
Sbjct: 651 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 710

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           +PN I Y+ ++ G R    +  A    ++M+             LI  L +EG++  A  
Sbjct: 711 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 770

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
              E L+KG   +++ F  L+ G C KG LE A  +L++M      P  + Y T+I    
Sbjct: 771 LYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYF 830

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           + G ++EA  L  +ML +GLVP  VTY  +I+
Sbjct: 831 REGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 862



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 174/366 (47%), Gaps = 12/366 (3%)

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           N +    RIE A +  N M     IP V     ++    R   + + + +  +M   G  
Sbjct: 198 NAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIY 257

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            +  +    +      G+  EA E    ++E     +A  YS+++  + ++   +   ++
Sbjct: 258 GDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLEL 317

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           + EM ++G+ P+      +I +   +G M  A +  +E +N G  +N+V  TSL++G+C 
Sbjct: 318 LEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCA 377

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           +G+L+ AL+L + +      P+ VTY+ +I+    +G +E+A+EL  +M   G+ P+V  
Sbjct: 378 QGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFN 437

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA----YNQVIENLCSFGYLEEAGKILGK 607
             +++  Y +    E+  KL ++ +    C  A    YN ++  LC  G ++EA  +L  
Sbjct: 438 VNSLLRGYLKAPLWEEASKLFDEAVD---CGVANIFTYNIMMSWLCKGGKMDEACSLLDN 494

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           ++      +  + + ++  +  KG   +A  V   M  R+L P++     V+  ++++G 
Sbjct: 495 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNV-----VTYSILIDGN 549

Query: 668 SEEADT 673
            ++ D+
Sbjct: 550 FKKGDS 555



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/344 (21%), Positives = 140/344 (40%), Gaps = 57/344 (16%)

Query: 102 LLRSLKPRQICAVLR-----SQADERVALQFFYWADRQWRYRHDP--IVYYMMLEILSKT 154
           L R LKP  +   +       + D   AL  F   D+       P    +  ++  L K 
Sbjct: 531 LARDLKPNVVTYSILIDGNFKKGDSEKALDLF---DQMLSLNIAPTDFTFNTIINGLCKV 587

Query: 155 KLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
                A+  L+     G       ++ ++  + + G + +A+ V   M +  V+PN++  
Sbjct: 588 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 647

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
            + I+     N++  AL+  + M+  G+  +V  Y+ LI G+C    ++ A  L  E+  
Sbjct: 648 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 707

Query: 275 KGCSPDKV-----------------------------------SYYTVMGYLCKEKRIKE 299
            G SP+++                                   +Y T++  L KE R+  
Sbjct: 708 VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVF 767

Query: 300 VRDLMEKM-----VNDSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
             DL  +M     V D   FH       ++G++E A++++ +M +    P V+ Y  ++ 
Sbjct: 768 ASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIA 827

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
           G+ R G L +A  +  +M   G  P+ V+Y   +NG     +SL
Sbjct: 828 GYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSL 871


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 233/468 (49%), Gaps = 34/468 (7%)

Query: 150 ILSKTKLCQGAKRVLRLM-ARR---GIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQ 203
           +++   L  G  R  RL  ARR   G+  +P A++Y  L+      G++R+A+ VL  M 
Sbjct: 135 VVAYGALTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDML 194

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
               AP+++  N  +     G    +A+  ++ M+  G TPN +TYN L+ G C    + 
Sbjct: 195 CRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVD 254

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
           DA++L+  +P  GC P  V+Y TV+  LC  +R                         +A
Sbjct: 255 DALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWG-----------------------DA 291

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
            ELV +M +  C P+  T+  V+   CR G L QA ++L++M  HGC  N V+Y A +NG
Sbjct: 292 DELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING 351

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           LC       A  +++  +     P+ +TY+ ++ GL    +  +A +++  M + G  P 
Sbjct: 352 LCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPD 411

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V  N LI  LC++G M  A +  ++  +KGC  N + ++++I G  +   L++AL L +
Sbjct: 412 NVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFN 471

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M     +PD + Y  + + L+ +  +EEA + + K+   G+ P  V Y  ++   C+ G
Sbjct: 472 EMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNG 530

Query: 564 RVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKV 608
           + E  + ++  M+S   C      Y  +IE L   GYL EA ++L K+
Sbjct: 531 KTEFAIDIMAYMVSS-GCMPDDLTYVILIEGLAYEGYLNEARELLIKL 577



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 219/469 (46%), Gaps = 70/469 (14%)

Query: 214 CNTAIHVLVVG---NKLAKALRFLERMQLAG---ITPNVLTYNCLIKGYCDLHRIKDAIK 267
           C  A  V+  G   +   +A R  +  ++ G   + PN  TYN LI   C+  +++DA+ 
Sbjct: 129 CGPAATVVAYGALTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALS 188

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELV 327
           ++D+M  +GC+PD V+Y  ++   CK +  ++                       A EL+
Sbjct: 189 VLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ-----------------------AMELI 225

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           + M   GC P+ VTY  +++G C  G++D A ++L+ +  HGCKP+TV+Y   L GLC  
Sbjct: 226 DLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSA 285

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            +  +A E++     E   PN  T++VV++ L R+G L +A  ++ +M K G     V  
Sbjct: 286 ERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTY 345

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N +I  LC +  +DGA   + +  + GC  ++V + +L++G C      +A  L+D+M  
Sbjct: 346 NAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQ 405

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD VT+ T+I  L + G + +A E+  +M  KG  P  +TY T+I    +  +++ 
Sbjct: 406 NGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQ 465

Query: 568 LLKLLEKMLSK-------------------------QKCR-----------TAYNQVIEN 591
            L+L  +M  K                         Q  R             YN ++  
Sbjct: 466 ALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLG 525

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLV-----ESYLNKGIPLL 635
           LC  G  E A  I+  ++ +    D  T  +L+     E YLN+   LL
Sbjct: 526 LCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 212/421 (50%), Gaps = 22/421 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y ++P+++      L +    + A  VL  M  RG  C P+  +Y  L+ A  +    R 
Sbjct: 168 YTYNPLIH-----TLCERGQVRDALSVLDDMLCRG--CAPDVVTYNILLEATCKGRGYRQ 220

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           AM ++ +M+     PN +  N  +  +     +  AL  L  +   G  P+ + YN ++K
Sbjct: 221 AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 280

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
           G C   R  DA +L+ EM  + C P++ ++  V+  LC++  +++   L+EKM       
Sbjct: 281 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 340

Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                    N   +Q  ++ A  L+++M   GC PD+VTY  ++ G C   +   A++++
Sbjct: 341 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELM 400

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
             M  +GC P+ V++   +  LC  G  ++A E+     ++  TPN+ITYS ++ GL + 
Sbjct: 401 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 460

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            KL +A ++  EM  KGF P  +   LL + L  +  ++ A + +++  + G + + V +
Sbjct: 461 TKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 519

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            +++ G C+ G  E A+ ++  M      PD +TY  +I+ L+  G + EA EL++K+ S
Sbjct: 520 NAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCS 579

Query: 543 K 543
           +
Sbjct: 580 R 580



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 209/446 (46%), Gaps = 33/446 (7%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G    V+ Y  L  GYC   R+ DA +++  MP++   P+  +Y  ++  LC        
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDARRVVGGMPVQ---PNAYTYNPLIHTLC-------- 178

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                          ++G++ +A  +++ M   GC PDVVTY  ++   C+     QA +
Sbjct: 179 ---------------ERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 223

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           ++  M   GC PN V+Y   ++G+C  G   +A E++         P+ + Y+ V+ GL 
Sbjct: 224 LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 283

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
              +  +A ++V EM+++   P     N++I SLCR+G +  A + +++    GC  N+V
Sbjct: 284 SAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIV 343

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDM--YLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            + ++I G C++ +++ A+ LL  M  Y CK  PD VTY T++  L    +  +A ELM 
Sbjct: 344 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCK--PDIVTYNTLLKGLCSAAQWVDAEELMD 401

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
            M   G +P  VT+ T+I   CQ G + D +++ ++M  K        Y+ +I  L    
Sbjct: 402 NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKAT 461

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            L++A ++  ++       D     +L E   +      A +   ++ +  + P   L  
Sbjct: 462 KLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYN 520

Query: 657 KVSERLILEGKSEEADTLMLRFVERG 682
            +   L   GK+E A  +M   V  G
Sbjct: 521 AILLGLCRNGKTEFAIDIMAYMVSSG 546



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 153/307 (49%), Gaps = 26/307 (8%)

Query: 174 CRPEAFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P   ++ +V YS  R G L+ A+ +L  M K     N++  N  I+ L     +  A+
Sbjct: 303 CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAM 362

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
             L +M+  G  P+++TYN L+KG C   +  DA +L+D M   GC PD V++ T++G+L
Sbjct: 363 GLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFL 422

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           C+                       +G + +A E+  QM   GC P+ +TY+ +++G  +
Sbjct: 423 CQ-----------------------KGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAK 459

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
             +LDQA ++  +M H G  P+ + Y      L  +    EA + +   ++   +P+ + 
Sbjct: 460 ATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVL 518

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+ ++ GL R GK   A D++  MV  G  P  +   +LI+ L  EG ++ A++ + +  
Sbjct: 519 YNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLC 578

Query: 472 NKGCAVN 478
           ++   VN
Sbjct: 579 SRDVLVN 585



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 166/346 (47%), Gaps = 18/346 (5%)

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
           S L H +G ++ A  LV    +    PD      +V   CR G  D A++++       C
Sbjct: 79  SALVH-RGDLDAALRLVESSPRP---PDAALANRLVRDLCRRGRPDDAERVV-----GAC 129

Query: 371 KP--NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
            P    V+Y A  +G C  G+  +AR ++     +   PNA TY+ ++H L   G++ +A
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDARRVVGGMPVQ---PNAYTYNPLIHTLCERGQVRDA 186

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             V+ +M+ +G  P  V  N+L+++ C+      A + +     +GC  N V +  L+ G
Sbjct: 187 LSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDG 246

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C +GD+++AL LL ++      P TV Y T++  L    R  +A EL+ +ML +   P 
Sbjct: 247 MCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPN 306

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKIL 605
             T+  VI+  C+ G ++  ++LLEKM SK  C      YN +I  LC    ++ A  +L
Sbjct: 307 EATFNVVIYSLCRKGLLQQAIQLLEKM-SKHGCTANIVTYNAIINGLCEQRNVDGAMGLL 365

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            K+     K D  T + L++   +    + A ++   M     +PD
Sbjct: 366 SKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPD 411



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 117/253 (46%), Gaps = 44/253 (17%)

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +  L   G L  A  +V    +    P     N L++ LCR G+ D A++ +  C   G 
Sbjct: 78  LSALVHRGDLDAALRLVESSPRP---PDAALANRLVRDLCRRGRPDDAERVVGAC---GP 131

Query: 476 AVNVVNFTSLIRGF--------------------------------CQKGDLEEALSLLD 503
           A  VV + +L  G+                                C++G + +ALS+LD
Sbjct: 132 AATVVAYGALTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLD 191

Query: 504 DMYLCKK-DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           DM LC+   PD VTY  +++A  K     +A EL+  M ++G  P  VTY  ++   C  
Sbjct: 192 DM-LCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGE 250

Query: 563 GRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
           G V+D L+LL + L    C+ +   YN V++ LCS     +A +++ ++LR     + +T
Sbjct: 251 GDVDDALELL-RNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEAT 309

Query: 620 CHVLVESYLNKGI 632
            +V++ S   KG+
Sbjct: 310 FNVVIYSLCRKGL 322


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/533 (26%), Positives = 266/533 (49%), Gaps = 28/533 (5%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P  F+Y  L+  +S AG L  A+ +L  M+      N ++  T +  L    ++ +AL
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
                M      P+V+TY  L+   C   +  +A  ++ EM  +GC+PD V++ T++  L
Sbjct: 65  EHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 292 CK----EKRIKEVRDLMEKMVNDSN---------LFHDQGRIEEAKELVNQMSQMGCIPD 338
           CK    E+  + + D++++ + +S+         L +    +E A +++  +   G  P 
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V+ +  V+NGFC+  +LD A K+L+ M   GC PN  ++T  + GLC   +  EA++++ 
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                  +PN +TYS V++GL ++G++ +A ++ + M ++   P  V  N+LI  LC+  
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 303

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK-KDPDTVTY 517
           +++ A++        GCA +++ + SLI G C+   ++EA  L   +        + VTY
Sbjct: 304 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTY 363

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           +T+    +  GR+ +A  +   ++ KG  P + TY ++I  YC+  R  ++++L+E+M S
Sbjct: 364 STLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMAS 423

Query: 578 K---QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE-----SYLN 629
           K    +  T  + V+  L    + E A ++   +       DA   +++VE     S  N
Sbjct: 424 KGFPPRVNT-LSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHN 482

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           K + +L   +  R  +R   P       + E L   G++++A  L+ +  ERG
Sbjct: 483 KALAVLEQVIDKR--DRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERG 533



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 138/559 (24%), Positives = 263/559 (47%), Gaps = 31/559 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY-SRAGKLRNAMYV 198
           D + +  +++ L K    + A RVL  + +RG+     AF  ++    ++   +  A  V
Sbjct: 112 DTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKV 171

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L ++      P +L+ N  I+       L  A + LE M   G  PNV T+  LI G C 
Sbjct: 172 LGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCK 231

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
            +R+ +A +L+++M   GCSP+ V+Y TV+  LCK                       QG
Sbjct: 232 ANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCK-----------------------QG 268

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           ++++A EL   M +  C P+VVT+  +++G C+   +++A+++  +M   GC P+ ++Y 
Sbjct: 269 QVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYN 328

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTP-NAITYSVVMHGLRREGKLSEACDVVREMVK 437
           + ++GLC + +  EA ++  T  E   +  NA+TYS + HG    G++++AC +   +V 
Sbjct: 329 SLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVD 388

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KGF P       LI   C+  +     + ++E  +KG    V   ++++ G  +    E 
Sbjct: 389 KGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTER 448

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK---GLVPTVVTYRT 554
           A+ L D M       D + Y  +++ +++  +  +A  ++ +++ K      P+      
Sbjct: 449 AIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDA 508

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           ++   CQVGR +D  +LL KM  +      ++YN ++  L      +EA ++   ++   
Sbjct: 509 LVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAG 568

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
              + ST +V++    +      AY++  RM      PD++ C  +       G+++ A 
Sbjct: 569 PAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLAR 628

Query: 673 TLMLRFVERGHIQPKSEEH 691
            L+    E G ++P    H
Sbjct: 629 KLLEEMTEAG-LEPNDTTH 646



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 152/339 (44%), Gaps = 16/339 (4%)

Query: 128 FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIEC-RPEAFSYLMVAY 186
            Y   R+     D I Y  +++ L K+     A ++ + +   G+       +S L   Y
Sbjct: 311 LYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGY 370

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
           +  G++ +A  + SM+     +P+L    + I      ++  + +  +E M   G  P V
Sbjct: 371 AALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRV 430

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR-------IKE 299
            T + ++ G  + +  + AI+L D M  +GC+ D + Y  V+  + +  +       +++
Sbjct: 431 NTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQ 490

Query: 300 VRDLMEKMVNDSNLFHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           V D  ++  N S+   D         GR ++AK+L+++MS+ G    V +Y  +++G  R
Sbjct: 491 VIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSR 550

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
           +   D+A ++ + M   G  P   +    ++ LC   K  +A E++    +    P+  T
Sbjct: 551 LQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIET 610

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            + ++ G  + G+   A  ++ EM + G  P     +LL
Sbjct: 611 CNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 219/461 (47%), Gaps = 27/461 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D   Y ++L+ L        A  +LR+MA  G  C P+  +Y  V   + + G +  A  
Sbjct: 183 DVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACD 242

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  + P+L+  ++ +H L     + KA  FL +M   G+ P+  TYN LI GY 
Sbjct: 243 LFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 302

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              + K+A+++  EM  +   PD V+  T+MG LCK  +IKE RD+ +            
Sbjct: 303 STGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD------------ 350

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
                       M+  G  PDV +YT ++NG+   G L     +   M   G  P   ++
Sbjct: 351 -----------TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTF 399

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              +    + G   +A  + N   +    P+ +TY  V+  L R GK+ +A +   +M+ 
Sbjct: 400 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMID 459

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P     + LIQ  C  G +  AK+ + E +N G  +++V F S+I   C+ G + +
Sbjct: 460 QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMD 519

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A ++ D        PD V Y  ++D     G++E+A  +   M+S G+ P VV Y T+++
Sbjct: 520 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 579

Query: 558 RYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
            YC++GR+++ L L  +ML K  +     YN +I+ L   G
Sbjct: 580 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 188/413 (45%), Gaps = 12/413 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +ML   +          +  LM   GI      F+ L+ AY+  G L  AM + 
Sbjct: 360 DVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIF 419

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M+   V P+++   T I  L    K+  A+    +M   G+ P+   Y+CLI+G+C  
Sbjct: 420 NEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTH 479

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
             +  A +LI E+   G   D V + +++  LCK  R+ + +++ +  VN          
Sbjct: 480 GSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 539

Query: 312 NLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N+  D     G++E+A  + + M   G  P+VV Y  +VNG+C++G +D+   + ++M  
Sbjct: 540 NMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQ 599

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G KP+T+ Y   ++GL   G+++ A+   +   E     N  TYS+V+ GL +     E
Sbjct: 600 KGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDE 659

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  + +E+         + +N +I  + +  +++ AK         G     V ++ +I 
Sbjct: 660 AIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMIT 719

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
              ++G +EEA  +   M     +PD+     ++  L K   +  A   + K+
Sbjct: 720 NLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 772



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 203/477 (42%), Gaps = 36/477 (7%)

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKAL--RFLERMQLAGI-TPNVLTYNCLIKGYCDLHRI 262
           A AP+   C +       G  LA AL  R   R Q   + +P   TY  L+      HR 
Sbjct: 77  ARAPSSAACGS-------GPALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRP 129

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
           + A+    ++   G   D +    ++   C+ KR  E  D+                   
Sbjct: 130 ELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI------------------- 170

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG--CKPNTVSYTAF 380
              L+++  ++GC+PDV +Y  ++   C  G+  QA  +L+ M   G  C P+ V+Y   
Sbjct: 171 ---LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++G    G   +A ++     +    P+ +TYS V+H L +   + +A   +R+MV KG 
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 287

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P     N LI      G+   A +  +E   +    +VV   +L+   C+ G ++EA  
Sbjct: 288 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           + D M +  ++PD  +YT +++  +  G + + T+L   ML  G+ P + T+  +I  Y 
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYA 407

Query: 561 QVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
             G ++  + +  +M     +     Y  VI  LC  G +++A +   +++      D  
Sbjct: 408 NCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKY 467

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
             H L++ +   G  L A ++   + N  +  D+     +   L   G+  +A  + 
Sbjct: 468 AYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 14/250 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D + +  ++  L K      A+ +  L    G+      ++ LM  Y   GK+  A+ 
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   M  A + PN++   T ++      ++ + L     M   GI P+ + YN +I G  
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG------------YLCKEKRIKEVR-DLM 304
           +  R   A     EM   G + +K +Y  V+             +L KE R   V+ D++
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                 + +F  + R+EEAK+L   +S+ G +P  VTY+ ++    + G +++A+ M   
Sbjct: 678 TLNTMIAGMFQTR-RVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSS 736

Query: 365 MYHHGCKPNT 374
           M + GC+P++
Sbjct: 737 MQNAGCEPDS 746


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/575 (26%), Positives = 260/575 (45%), Gaps = 36/575 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D I Y  +L+ L +    Q A  +L  M ++   C P   SY  V   + R G++  A  
Sbjct: 189 DTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACN 248

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  V P+++  ++ I  L     + KA   L +M   G  P+ +TYNC+I GY 
Sbjct: 249 LFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYS 308

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------V 308
            L + K+   +  EM  +G  PD  +  + M  LCK  + KE  +  + M         V
Sbjct: 309 ILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLV 368

Query: 309 NDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             S L H    +G + +   L N M   G + D   Y  +++ + + G +D+A  +  QM
Sbjct: 369 TYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQM 428

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  P+  +Y   +      G+  +A +  N        P+ I Y+ ++ G    G L
Sbjct: 429 QERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNL 488

Query: 426 SEACDVVREMVKKGFF-PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
            +A +++ EM+ +G   P  V  N +I SLC+EG++  A+      ++ G   +V+ F S
Sbjct: 489 VKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNS 548

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G+   G +E+A  +LD M     +PD VTY+ ++D   +NGR+++   L  +MLSKG
Sbjct: 549 LIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKG 608

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAG 602
           + PT +TY  ++H     GR     K+  +M+        +    ++  LC     +EA 
Sbjct: 609 VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAI 668

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV-----ACRMFNR----NLIPDLK 653
            +  K+     K + +  + ++++          YKV     A  +F+      L+P+  
Sbjct: 669 ALFKKLGAMNVKFNIAIINTMIDAM---------YKVRKREEANELFDSISATGLVPNAS 719

Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
               +   L+ EG  EEAD  M   +E+    P S
Sbjct: 720 TYGVMITNLLKEGSVEEADN-MFSLMEKSGCAPSS 753



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/543 (25%), Positives = 239/543 (44%), Gaps = 52/543 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y   ++ L K +    A+ VLR M   G E     ++ ++  YS  G+ +    + 
Sbjct: 261 DVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMF 320

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  + P++  CN+ +  L    K  +A  F + M   G  P+++TY+ L+ GY   
Sbjct: 321 REMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAE 380

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------ 313
             + D + L + M   G   D   Y  ++    K   + E   +  +M     +      
Sbjct: 381 GYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTY 440

Query: 314 ------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                 F   GR+ +A +  NQM  MG  PD + Y +++ GFC  G L +AK+++ +M  
Sbjct: 441 GTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMS 500

Query: 368 HGC-KPNTVSYTAFLNGLCHNGKSLEARE-------------------------MINTSE 401
            G  +PNTV + + +N LC  G+ +EA++                         ++   E
Sbjct: 501 RGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKME 560

Query: 402 EEWWT----------PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           + +            P+ +TYS ++ G  R G++ +   + REM+ KG  PT +   +++
Sbjct: 561 KAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIIL 620

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             L  +G+  GAKK   E +  G  +++     ++ G C+    +EA++L   +      
Sbjct: 621 HGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVK 680

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE---DL 568
            +     T+IDA+ K  + EEA EL   + + GLVP   TY  +I    + G VE   ++
Sbjct: 681 FNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNM 740

Query: 569 LKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
             L+EK       R   N +I  L   G + +AG  L KV       +AST  +++  + 
Sbjct: 741 FSLMEKSGCAPSSRL-LNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFS 799

Query: 629 NKG 631
            KG
Sbjct: 800 RKG 802



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 228/496 (45%), Gaps = 25/496 (5%)

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK-LI 269
           L+ C    H   VG  L    RFL+     G+  +V+  N L+K  C   R  DA+  L+
Sbjct: 125 LMDCCCRAHRPTVGFALFG--RFLK----TGLKTDVIVANILLKCLCHAKRSDDAVNVLL 178

Query: 270 DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------------NLFH 315
             MP  G  PD +SY TV+  LC++ R +   DL+  MV  S              + F 
Sbjct: 179 HRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFF 238

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
            +G + +A  L ++M Q G +PDVVTY++ ++  C+   +D+A+ +L+QM  +G +P+ V
Sbjct: 239 REGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKV 298

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y   ++G    G+  E   M          P+  T +  M  L + GK  EA +    M
Sbjct: 299 TYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSM 358

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
             KG  P  V  ++L+     EG +             G   +   +  LI  + ++G +
Sbjct: 359 AAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMM 418

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           +EA+ +   M      PD  TY T+I A S+ GR+ +A +   +M++ GL P  + Y ++
Sbjct: 419 DEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSL 478

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           I  +C  G +    +L+ +M+S+   R     +N +I +LC  G + EA  I   V+   
Sbjct: 479 IQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIG 538

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
            + D  T + L++ Y   G    A+ V   M +  + PD+     + +     G+ ++  
Sbjct: 539 ERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGL 598

Query: 673 TLMLRFVERGHIQPKS 688
            L    + +G ++P +
Sbjct: 599 ILFREMLSKG-VKPTT 613



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 179/406 (44%), Gaps = 48/406 (11%)

Query: 336 IPDVVTYTAVVN----------GFCRVGEL--------------------------DQAK 359
           +P V TY  +++          GF   G                            D   
Sbjct: 116 LPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVN 175

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT--SEEEWWTPNAITYSVVMH 417
            +L +M   G +P+T+SY+  L  LC + +S  A ++++T   +    +PN ++Y+ V+H
Sbjct: 176 VLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH 235

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  REG++S+AC++  EM+++G  P  V  +  I +LC+   MD A+  +++ ++ G   
Sbjct: 236 GFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEP 295

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           + V +  +I G+   G  +E   +  +M      PD  T  + + +L K+G+ +EA E  
Sbjct: 296 DKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFF 355

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSF 595
             M +KG  P +VTY  ++H Y   G V D+L L   M         + YN +I+     
Sbjct: 356 DSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKR 415

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
           G ++EA  I  ++       DA T   ++ ++   G    A     +M    L PD  + 
Sbjct: 416 GMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVY 475

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVFLNS 701
             + +   + G   +A  L+   + RG  +P +        VF NS
Sbjct: 476 NSLIQGFCMHGNLVKAKELISEMMSRGIPRPNT--------VFFNS 513



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 193/468 (41%), Gaps = 88/468 (18%)

Query: 124 ALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           A +FF   D      H P  + Y ++L   +          +   M   GI      ++ 
Sbjct: 351 AAEFF---DSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNI 407

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+ AY + G +  AM + + MQ+  V P+     T I       +LA A+    +M   G
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS-PDKVSYYTVMGYLCKEKRIKEV 300
           + P+ + YN LI+G+C    +  A +LI EM  +G   P+ V + +++  LCKE R+ E 
Sbjct: 468 LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEA 527

Query: 301 RDLMEKMVN-----DSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
           +D+ + +++     D   F+         G++E+A  +++ M  +G  PDVVTY+A+++G
Sbjct: 528 QDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDG 587

Query: 349 FCRVGELDQ-----------------------------------AKKMLQQMYHHGCKPN 373
           +CR G +D                                    AKKM  +M   G   +
Sbjct: 588 YCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647

Query: 374 TVSYTAFLNGLCHNG-----------------------------------KSLEAREMIN 398
             +    L GLC N                                    K  EA E+ +
Sbjct: 648 ISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFD 707

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
           +       PNA TY V++  L +EG + EA ++   M K G  P+   +N +I+ L  +G
Sbjct: 708 SISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKG 767

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           ++  A  ++ +   K  ++     + ++  F +KG   E +  L  MY
Sbjct: 768 EISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPAMY 815


>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 234/484 (48%), Gaps = 38/484 (7%)

Query: 106 LKPRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGA---- 160
           + P     VL S +   R+AL+ F WA+ Q  +R    V+  +LEIL++  L + A    
Sbjct: 385 VDPDLFVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVM 444

Query: 161 KRVLRLMARRGI----------ECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           +RV+     R +          E   +    L+  YS+   +   + V   M K+ ++P+
Sbjct: 445 ERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPD 504

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           +  CN  + +L   + ++KA+     M   GI P ++TYN L+  YC   +++  + L+ 
Sbjct: 505 VKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLS 564

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQM 330
           EM  +GC+P+ V+Y  ++  L K                       +G  E+AK L+ +M
Sbjct: 565 EMQRRGCAPNDVTYNVLINGLSK-----------------------KGEFEQAKGLIGEM 601

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            + G      TY  ++ G+   G L +A  + ++M   G  P   +Y +F+ GLC  G+ 
Sbjct: 602 LKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 661

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            +A + ++        P+ ++Y+ +++G  R G L +A  +  E+     FPT V  N L
Sbjct: 662 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 721

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           +  LCR+G+++ A++   E +N+G A ++V +T L+ G C+ G L  A    D+M     
Sbjct: 722 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 781

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
           + D+  Y T I    K G    A  L  +ML+KG  P ++ Y  V+   C++G +E+  +
Sbjct: 782 ELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASE 841

Query: 571 LLEK 574
           LL+K
Sbjct: 842 LLQK 845



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 206/433 (47%), Gaps = 55/433 (12%)

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTV---MGYLCKEKRIKEVRDLMEKMVNDS--- 311
           ++HRI D +       + GC   +VS   +   +    K+  +++   + +KM+      
Sbjct: 451 NMHRIVDVL-------IGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSP 503

Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                     +  D+  + +A E+   M + G  P +VTY  +++ +C+ G++ Q   +L
Sbjct: 504 DVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLL 563

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            +M   GC PN V+Y   +NGL   G+  +A+ +I    +     +A TY+ +++G   +
Sbjct: 564 SEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNK 623

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G L+EA  +  EMV KG  PT    N  I  LC+ G+M  A + + + L      +VV++
Sbjct: 624 GLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSY 683

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            +LI G+C+ G+L +A  L D++      P  VTY T++D L + G +E A +L ++M++
Sbjct: 684 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMIN 743

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAG 602
           +G+ P +VTY  +++  C++G +    +  ++ML +             L S+ Y   A 
Sbjct: 744 EGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL----------ELDSYAY---AT 790

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           +I+G++       D S    L E  L KG P                PDL +   V + L
Sbjct: 791 RIVGEL----KLGDTSRAFSLQEEMLAKGFP----------------PDLIIYNVVVDGL 830

Query: 663 ILEGKSEEADTLM 675
              G  EEA  L+
Sbjct: 831 CKLGNLEEASELL 843



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 3/268 (1%)

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           ++  + +   V  +M+K    P     N +++ L  +  M  A +  +     G    +V
Sbjct: 482 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 541

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +L+  +C+ G +++ L LL +M      P+ VTY  +I+ LSK G  E+A  L+ +M
Sbjct: 542 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 601

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYL 598
           L  GL  +  TY  +I+ Y   G + + L L E+M+ K    T   YN  I  LC  G +
Sbjct: 602 LKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 661

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
            +A + L  +L      D  + + L+  Y   G  + A+ +   + +  L P +     +
Sbjct: 662 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 721

Query: 659 SERLILEGKSEEADTLMLRFVERGHIQP 686
            + L  +G+ E A  L +  +  G I P
Sbjct: 722 LDGLCRQGELEVAQQLKVEMINEG-IAP 748


>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
 gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 261/505 (51%), Gaps = 35/505 (6%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADR-QWRYRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           L P+++ +++  Q +  +A Q F +A +    + H    Y+ +++ LS+ +   G + +L
Sbjct: 13  LYPKRLISMITHQENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAFDGVESLL 72

Query: 165 RLMARRG--IECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA-AVAPNLLICNTAIHVL 221
             ++R    I+C  + F  ++  Y  AG+ R A+   + +++  ++ P++ + NT ++V 
Sbjct: 73  SQLSRNSSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVF 132

Query: 222 VVGNKLAKALRFLERMQ-LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
           V   +       L+  +   G+ PNV ++N LIK  C  + +++A+K+ DEMP  G  P+
Sbjct: 133 VQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPN 192

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
            V+Y T++G                        F  +G +  A+++ +++S  G +PD  
Sbjct: 193 LVTYTTILGG-----------------------FVSRGDLVNAEKVFSEISDKGWLPDAT 229

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TYT ++ G+C+ G L  A K++  M ++G +PN V+Y   ++  C   KS EAR +I+  
Sbjct: 230 TYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDM 289

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
            ++ + P++     V+  L  +GK+  AC + + M++K   P    ++ LI  LC+EGK+
Sbjct: 290 LDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKV 349

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             A+K   E   +G   +++ + +LI G C++G+L EA  L DDM   +  P+  TY  +
Sbjct: 350 WEARKLFDE-FEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNML 408

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE-KMLSKQ 579
           I    K G V+E   ++ +ML  G +P   TY  +I    + G   D+ K++   M S++
Sbjct: 409 IKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMSMAMASRE 468

Query: 580 KCRTAYN----QVIENL-CSFGYLE 599
               +++    +++ NL C  G L+
Sbjct: 469 VDADSWDLFLHKIVGNLDCGTGALD 493



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 156/310 (50%), Gaps = 5/310 (1%)

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L N   + G +P+V ++  ++   C+  +++ A K+  +M   G  PN V+YT  L G  
Sbjct: 145 LKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFV 204

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G  + A ++ +   ++ W P+A TY+V+M G  ++G+LS+A  V+  M   G  P  V
Sbjct: 205 SRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEV 264

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
              ++I + C+E K   A+  + + L+K    +      +I   C+ G +E A  L   M
Sbjct: 265 TYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRM 324

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 PD    +T+I  L K G+V EA +L  +   +G +P+++TY T+I   C+ G +
Sbjct: 325 LEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDE-FEQGTIPSLMTYNTLIAGMCERGEL 383

Query: 566 EDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
            +  +L + M+ K +CR     YN +I+     G ++E  +IL ++L      + ST  +
Sbjct: 384 NEAGRLWDDMVEK-RCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTL 442

Query: 623 LVESYLNKGI 632
           L+E     G+
Sbjct: 443 LIEGLQESGM 452



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 140/305 (45%), Gaps = 6/305 (1%)

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +G  PN  S+   +  LC       A ++ +        PN +TY+ ++ G    G L  
Sbjct: 152 YGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVN 211

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  V  E+  KG+ P      +L+   C++G++  A K M      G   N V +  +I 
Sbjct: 212 AEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMID 271

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            +C++    EA +L+DDM   K  P +     +ID L ++G+VE A  L  +ML K  +P
Sbjct: 272 AYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLP 331

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ-KCRTAYNQVIENLCSFGYLEEAGKILG 606
                 T+IH  C+ G+V +  KL ++           YN +I  +C  G L EAG++  
Sbjct: 332 DNAIMSTLIHWLCKEGKVWEARKLFDEFEQGTIPSLMTYNTLIAGMCERGELNEAGRLWD 391

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
            ++    + +A T ++L++ ++  G+     ++   M +   +P+     K +  L++EG
Sbjct: 392 DMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPN-----KSTYTLLIEG 446

Query: 667 KSEEA 671
             E  
Sbjct: 447 LQESG 451



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 111/250 (44%), Gaps = 38/250 (15%)

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           K G  P     N+LI++LC++  ++ A K   E    G   N+V +T+++ GF  +GDL 
Sbjct: 151 KYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLV 210

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            A  +  ++      PD  TYT ++    K GR+ +A ++M  M   G+ P  VTY  +I
Sbjct: 211 NAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMI 270

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
             YC+  +  +   L++ ML K+     T   +VI+ LC  G +E A             
Sbjct: 271 DAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENA------------- 317

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
                CH+              +K   RM  +N +PD  +   +   L  EGK  EA  L
Sbjct: 318 -----CHL--------------WK---RMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKL 355

Query: 675 MLRFVERGHI 684
              F E+G I
Sbjct: 356 FDEF-EQGTI 364


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/532 (26%), Positives = 255/532 (47%), Gaps = 21/532 (3%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           +R D  +Y   ++   K +  +     L  M +RG+  RP  F Y  L+    R  ++R+
Sbjct: 172 FRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGV--RPNVFIYNVLIGGLCREKRIRD 229

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +   M    +  +++  NT I       +L  A +  ERM+   + PN++T+N L+ 
Sbjct: 230 AEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLS 289

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
           G C + ++K+A  L+ EM + G  PD  +Y  +   L +        +L E+        
Sbjct: 290 GLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRI 349

Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                    N    QG++E+A+E++ + ++ G + D V Y   VNG+CR+G++++A   +
Sbjct: 350 NNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTI 409

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           ++M   G +PN++++ + ++  C   +  +A E +    E+  TP+  TY+ ++ G  + 
Sbjct: 410 ERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKL 469

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
                   ++ +M + G  P  V    LI  LC++GK+  A+  +++ + +G   N   +
Sbjct: 470 CTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVY 529

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
             LI G C  G +++AL   D+M   +  P  VTY  +ID L K G++ EA + + ++ S
Sbjct: 530 NMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITS 589

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS---KQKCRTAYNQVIENLCSFGYLE 599
            G  P V+TY ++I  Y   G V   L L E M +   K   RT Y+ +I   CS   +E
Sbjct: 590 SGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRT-YHPLISG-CSKEGIE 647

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              K+  ++L+     D    + ++  Y   G    AY +   M ++ + PD
Sbjct: 648 LVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPD 699



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/614 (23%), Positives = 276/614 (44%), Gaps = 52/614 (8%)

Query: 128 FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS 187
           F  + R+   R +  +Y +++  L + K  + A+++   M    +      ++ L+  Y 
Sbjct: 198 FLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYC 257

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           + G+L  A  +   M++ +VAPN++  N+ +  L    K+ +A   L+ M++ G  P+  
Sbjct: 258 KVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGY 317

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TY+ L  G         A++L ++   KG   +  +   ++  LCK+ ++++  ++++K 
Sbjct: 318 TYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKF 377

Query: 308 VNDS-----------------------------------------------NLFHDQGRI 320
             +                                                + F D   +
Sbjct: 378 TENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEM 437

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           ++A+E V +M++ G  P V TY  +++G+ ++   D+  ++L+QM   G KPN VSY + 
Sbjct: 438 DKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSL 497

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           +N LC +GK LEA  ++         PNA  Y++++ G    GK+ +A     EM++   
Sbjct: 498 INCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEI 557

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            PT V  N+LI  LC++GK+  A+ F+ +  + G + +V+ + SLI G+   G++ + L 
Sbjct: 558 SPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLG 617

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L + M      P   TY  +I   SK G +E   +L  +ML   L+P  V Y  +IH Y 
Sbjct: 618 LYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYA 676

Query: 561 QVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           ++G  +    L + ML +     +  YN +I      G L     ++  +        A 
Sbjct: 677 EIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKAD 736

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           T  +LV+ + +      AY     M   N +P+  +C +++  L  EG+ +E   +    
Sbjct: 737 TYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEM 796

Query: 679 VERGHIQ--PKSEE 690
             +G I   P  EE
Sbjct: 797 NVKGIINHWPSKEE 810



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 223/460 (48%), Gaps = 25/460 (5%)

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           +  K +     ++ +G   +   Y   I+    L  +K  ++ +D M  +G  P+   Y 
Sbjct: 156 QFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYN 215

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            ++G LC+EKRI+                       +A+++ ++M  +  +  +VTY  +
Sbjct: 216 VLIGGLCREKRIR-----------------------DAEKMFDEMCNINLVGSIVTYNTL 252

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G+C+VGELD A KM ++M      PN +++ + L+GLC   K  EAR ++   E   +
Sbjct: 253 IDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGF 312

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+  TYS++  GL R    + A ++  +  +KG        ++L+  LC++GK++ A++
Sbjct: 313 MPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEE 372

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            +++    G   + V + + + G+C+ GD+ +A+  ++ M      P+++T+ ++ID   
Sbjct: 373 ILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFC 432

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRT 583
               +++A E + KM  KG+ P+V TY T+I  Y ++   +   ++LE+M  +  +    
Sbjct: 433 DMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVV 492

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
           +Y  +I  LC  G + EA  +L  ++      +A   ++L++     G    A +    M
Sbjct: 493 SYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEM 552

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
               + P L     + + L  +GK  EA+  + +    GH
Sbjct: 553 MRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGH 592



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 124/293 (42%), Gaps = 3/293 (1%)

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           E   +  +   Y+  +    +   L    + +  M K+G  P     N+LI  LCRE ++
Sbjct: 168 ENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRI 227

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             A+K   E  N     ++V + +LI G+C+ G+L+ A  + + M      P+ +T+ ++
Sbjct: 228 RDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSL 287

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           +  L K  +++EA  L+ +M   G +P   TY  +     +       ++L E+   K  
Sbjct: 288 LSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGI 347

Query: 581 CRTAYNQVI--ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
               Y   I    LC  G +E+A +IL K       AD    +  V  Y   G    A  
Sbjct: 348 RINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAIL 407

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
              RM +  L P+      + ++     + ++A+  + +  E+G + P  E +
Sbjct: 408 TIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKG-VTPSVETY 459



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 73/154 (47%)

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           E +  +  D+  E+   GF          IQ+  +   +    +F+     +G   NV  
Sbjct: 154 EKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFI 213

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +  LI G C++  + +A  + D+M         VTY T+ID   K G ++ A ++  +M 
Sbjct: 214 YNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMK 273

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            K + P ++T+ +++   C++ ++++   LL++M
Sbjct: 274 EKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEM 307


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 245/497 (49%), Gaps = 56/497 (11%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           RAGK   ++Y L  +      P++++C   I        L KA+R +E ++  G  P+V 
Sbjct: 74  RAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVY 132

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           +YN +I G+   ++I  A ++ D M  +G SPD V+Y  ++G LC   +++   ++M+++
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDEL 192

Query: 308 VND----SNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           + D    S + +         +GRI EA EL +++   G  PD+ TY A++ G C+ G  
Sbjct: 193 LKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGME 252

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D+A   ++ +   GC P+ VSY   L    +  +  +   ++         PN +T+S++
Sbjct: 253 DRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSIL 312

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +    REG++ EA +V+  M +KG  P     + LI + C+EG++D A +++++ ++ GC
Sbjct: 313 ISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGC 372

Query: 476 AVNVVNFTSLIRGFCQKG--DLE---------------------------------EALS 500
             ++VN+ +++   C+ G  DL                                  +AL 
Sbjct: 373 LPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALE 432

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           ++ +M     DPD +TY ++I  L ++G V+EA  L++ M +    PTV+++  V+   C
Sbjct: 433 MISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMC 492

Query: 561 QVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           +  RV + ++LL  M+ K      T+Y  +IE +   G+  EA ++   + R    +  S
Sbjct: 493 KAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGDS 552

Query: 619 TCHVLVESYLNKGIPLL 635
           +        LNK  P+L
Sbjct: 553 S------KRLNKTFPML 563



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 218/456 (47%), Gaps = 38/456 (8%)

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA------LRFLERMQL 239
           +S    LRN        Q     PNL   N   H++ + N+  +A      L FLE +  
Sbjct: 35  FSNKTHLRNVTSSAEFRQPHF--PNL--DNRDAHLMKLLNRSCRAGKHNESLYFLESVVS 90

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
            G  P+V+    LIKG+ +   +K A+++++ +   G  PD  SY  ++           
Sbjct: 91  KGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISG--------- 140

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                         F    +I+ A ++ ++M   G  PDVVTY  ++   C  G+L+ A 
Sbjct: 141 --------------FSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           +++ ++   GCKP+ ++YT  +      G+  EA E+ +        P+  TY+ ++ G+
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            +EG    A D VR +  +G  P  V  N+L++S   + + +  ++ M++ +  GC  NV
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           V  + LI  FC++G + EA+++L+ M      PD+ +Y  +I A  K GR++ A E + K
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEK 366

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFG 596
           M+S G +P +V Y T++   C+ G  +  L + EK L +  C     AYN +   L S G
Sbjct: 367 MVSDGCLPDIVNYNTILATLCKFGCADLALDVFEK-LDEVGCPPTVRAYNTMFSALWSCG 425

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
              +A +++ +++R     D  T + L+      G+
Sbjct: 426 NKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGL 461



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 180/353 (50%), Gaps = 5/353 (1%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PDV +Y A+++GF +  ++D A ++  +M   G  P+ V+Y   +  LC  GK   A E+
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           ++   ++   P+ ITY++++     EG+++EA ++  E+V +G  P     N +I+ +C+
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           EG  D A  F++    +GC  +VV++  L+R F  K   E+   L+ DM L   +P+ VT
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVT 308

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           ++ +I +  + GRV EA  ++  M  KGL P   +Y  +I  +C+ GR++  ++ LEKM+
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368

Query: 577 SKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           S   C      YN ++  LC FG  + A  +  K+            + +  +  + G  
Sbjct: 369 S-DGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNK 427

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           + A ++   M  + + PD      +   L  +G  +EA  L++  +E    QP
Sbjct: 428 IKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVD-MEATRFQP 479



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 192/421 (45%), Gaps = 14/421 (3%)

Query: 140 DPIVYY--MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           DP VY    M+   SK      A +V   M  RG       ++ ++ +    GKL  A  
Sbjct: 128 DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFE 187

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V+  + K    P+++     I   ++  ++ +AL   + +   G+ P++ TYN +I+G C
Sbjct: 188 VMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGIC 247

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
                  A+  +  +  +GC+PD VSY  ++     + R ++   LM+ MV         
Sbjct: 248 KEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVV 307

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 + F  +GR+ EA  ++  M + G  PD  +Y  +++ FC+ G LD A + L++M
Sbjct: 308 THSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKM 367

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              GC P+ V+Y   L  LC  G +  A ++    +E    P    Y+ +   L   G  
Sbjct: 368 VSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNK 427

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A +++ EM++KG  P  +  N LI  LCR+G +D A   + +         V++F  +
Sbjct: 428 IKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIV 487

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           + G C+   + E + LL  M      P+  +Y  +I+ ++  G   EA EL   +   G+
Sbjct: 488 LLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGV 547

Query: 546 V 546
           +
Sbjct: 548 I 548



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 151/316 (47%), Gaps = 16/316 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           R D   Y  ++  + K  +   A   +R ++ RG  C P+  SY  L+ ++    +  + 
Sbjct: 233 RPDLYTYNAIIRGICKEGMEDRALDFVRHLSARG--CNPDVVSYNILLRSFLNKSRWEDG 290

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             ++  M  +   PN++  +  I       ++ +A+  LE M+  G+TP+  +Y+ LI  
Sbjct: 291 ERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISA 350

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-------- 307
           +C   R+  AI+ +++M   GC PD V+Y T++  LCK        D+ EK+        
Sbjct: 351 FCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPT 410

Query: 308 VNDSNLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
           V   N         G   +A E++++M + G  PD +TY ++++  CR G +D+A  +L 
Sbjct: 411 VRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLV 470

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M     +P  +S+   L G+C   +  E  E++ T  E+   PN  +Y +++ G+   G
Sbjct: 471 DMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAG 530

Query: 424 KLSEACDVVREMVKKG 439
             +EA ++   + + G
Sbjct: 531 WRAEAMELANSLYRLG 546



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 35/251 (13%)

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L+   CR GK + +  F++  ++KG   +VV  T LI+GF    +L++A+ +++ +    
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVME-ILETY 126

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
            DPD  +Y  +I   SK  +++ A ++  +M S+G  P VVTY                 
Sbjct: 127 GDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTY----------------- 169

Query: 570 KLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
                           N +I +LCS G LE A +++ ++L+   K    T  +L+E+ + 
Sbjct: 170 ----------------NIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATIL 213

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
           +G    A ++   + +R L PDL     +   +  EG  + A   +     RG   P   
Sbjct: 214 EGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARG-CNPDVV 272

Query: 690 EHLQRQRVFLN 700
            +    R FLN
Sbjct: 273 SYNILLRSFLN 283


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 226/477 (47%), Gaps = 25/477 (5%)

Query: 153 KTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
           K K C  A  +L+ M  +G+       S  +  Y   G++  A  VL ++ K    PN +
Sbjct: 96  KMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNI 155

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
              T +  L +  ++ KA+ F + +   G+  + + Y  LI G C + R  DA +L+ EM
Sbjct: 156 TLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEM 215

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQ 332
             +   P+ V Y  ++   CK++   + RDL  K+V+                       
Sbjct: 216 EGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVD----------------------- 252

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           MG  PD++TYT+++ GFCR G+  + K+++ +M +    PN  ++   ++  C  GK +E
Sbjct: 253 MGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIE 312

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A+ M N   +    P+ +T++ ++ G    G + EA  +   + ++G  P      +LI 
Sbjct: 313 AQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILII 372

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
             C+  ++D A     E   K   +++V ++SLI G C+ G +  A  L   +      P
Sbjct: 373 GYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPP 432

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           + +TY  +IDA  K   ++   EL   M  KGL PTV+TY  +I+ YC+  R+ + + LL
Sbjct: 433 NVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLL 492

Query: 573 EKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
             M SK        YN + + LC  G + +A ++   +       D +T +VL++++
Sbjct: 493 SVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAF 549



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 161/330 (48%), Gaps = 18/330 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           ++Y M+++   K +L   A+ +   +   GI+     ++ L+  + R G+      ++  
Sbjct: 225 VIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCE 284

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + PN+   N  I       K+ +A      M   G  P+++T+N LI G+C    
Sbjct: 285 MVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGN 344

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM-----EKMVNDSNLFHD 316
           + +A KL D +  +G  PD  SY  ++   CK KRI E   L      + MV D  L+  
Sbjct: 345 VLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSS 404

Query: 317 -------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                   GRI  A EL + ++  G  P+V+TY  +++ FC++ ++D   ++ + M   G
Sbjct: 405 LIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKG 464

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             P  ++Y   +NG C + +  EA  +++  + +   P++ITY+ +  GL + G++S+A 
Sbjct: 465 LTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAW 524

Query: 430 DVVREMVKKGFFPTPVEI---NLLIQSLCR 456
           ++ + M   G    PV++   N+L+ + C+
Sbjct: 525 ELFKVMHVGG---PPVDVATYNVLLDAFCK 551



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 146/314 (46%), Gaps = 10/314 (3%)

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           I++A  L N +  M  +P V+ +  ++    ++     A  +L+QM   G  P+  + + 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
           ++N  CH G+   A  ++    +  + PN IT + VM GL   G++ +A D    +  +G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
                V    LI  LC+ G+   A + +QE   +    N+V +  +I  FC+    +E  
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCK----DELT 240

Query: 500 SLLDDMYL----CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
               D+YL       DPD +TYT++I    + G+  E  +LM +M++K + P V T+  +
Sbjct: 241 CKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVL 300

Query: 556 IHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I  +C+ G++ +   +   M+   +Q     +N +I   C  G + EA K+   V     
Sbjct: 301 IDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGI 360

Query: 614 KADASTCHVLVESY 627
             D  +  +L+  Y
Sbjct: 361 LPDVWSYTILIIGY 374



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 130/280 (46%), Gaps = 6/280 (2%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ I ++ ++  + +      A  ++++MV KG  P+   +++ I   C  G+M  A   
Sbjct: 82  PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           +   L +G   N +  T++++G C  G++++A+   D++       D V Y T+I+ L K
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ---VGRVEDL-LKLLEKMLSKQKCR 582
            GR  +A +L+ +M  + + P +V Y  +I  +C+     +  DL LK+++  +      
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDI-- 259

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             Y  +I   C  G   E  +++ +++      +  T +VL++++  KG  + A  +   
Sbjct: 260 LTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNL 319

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           M  R   PD+     +     L G   EA  L     ERG
Sbjct: 320 MVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERG 359



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 69/158 (43%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D ++Y  +++ L K+     A  +   +   G       ++ L+ A+ +   +   + + 
Sbjct: 398 DIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELF 457

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M    + P +L  N  I+      ++ +A+  L  MQ   + P+ +TYN L  G C  
Sbjct: 458 KLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKS 517

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
            RI DA +L   M + G   D  +Y  ++   CK + +
Sbjct: 518 GRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/568 (25%), Positives = 253/568 (44%), Gaps = 27/568 (4%)

Query: 76  PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA---DERVALQFFYWAD 132
           P V ++ +L++        L+      L  L P  +  VL+S A      +A +FF+WA 
Sbjct: 87  PWVNQILKLLDGSVNMESNLDSYCSKFLIKLSPNFVAFVLKSDAIRGKPDIAFRFFWWAG 146

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +Q  Y H    Y  ++++LS +      + +      +G      A + L+ ++   G +
Sbjct: 147 KQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMV 206

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
              ++V   M+++ + P+L   N  ++ LV    +  A R  E M+   I P+V++YN +
Sbjct: 207 EELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTM 266

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           IKGYC     K A++   +M  +   PDK++Y T++                        
Sbjct: 267 IKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLI-----------------------Q 303

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
             + +G  +    L  +M + G       Y+ V+ G C+ G   +   + + M   GCK 
Sbjct: 304 ACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKA 363

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N   YTA ++    NG   EA  +    + E + P+ +TY V+++GL + G+L EA +  
Sbjct: 364 NVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYF 423

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
                       +  + LI  L + G++D A+KF +E + +GC  +   + +LI    + 
Sbjct: 424 EFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKS 483

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G +EEAL L   M     D    TYT +I  L K  R EEA +L   M+ KG+ PT  ++
Sbjct: 484 GKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASF 543

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKC-RTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           R +    C  G+V    K+L+++        TA+  +I  LC  G  E+A K+   ++  
Sbjct: 544 RALSVGLCLSGKVARACKILDELAPMGVIPETAFEDMINVLCKAGRTEQACKLADGIVDR 603

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKV 639
             +       +L+ +    G   LA K+
Sbjct: 604 GREVPGRVRTILINALRKAGNADLAMKL 631



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 195/438 (44%), Gaps = 13/438 (2%)

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL--FHD 316
           +H+I+  + LID + L     D+V         C     KE   LM     +S +  F  
Sbjct: 152 IHKIECYVSLIDVLSLSS-DFDRVR--------CIFGEFKEKGFLMTVFAANSLIRSFGA 202

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            G +EE   +  +M + G  P + T+  ++NG      ++ A+++ + M      P+ VS
Sbjct: 203 LGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVS 262

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   + G C  G + +A E     E+    P+ ITY  ++     EG       + +EM 
Sbjct: 263 YNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEME 322

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           ++G    P   +L+I  LC++G+        +    KGC  NV  +T+LI  + + G++ 
Sbjct: 323 ERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVN 382

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           EA++L + M     +PD VTY  I++ L K+GR++EA E         +    + Y ++I
Sbjct: 383 EAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLI 442

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASK 614
               + GRV++  K  E+M+ +   + +  YN +I+ L   G +EEA  +  ++ +    
Sbjct: 443 DGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCD 502

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
               T  +L+     +     A K+   M ++ + P     + +S  L L GK   A  +
Sbjct: 503 QTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKI 562

Query: 675 MLRFVERGHIQPKSEEHL 692
           +      G I   + E +
Sbjct: 563 LDELAPMGVIPETAFEDM 580



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 24/263 (9%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  D + Y +++  L K+     A           +      +S L+    +AG++  A 
Sbjct: 396 FEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAE 455

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
                M +     +    N  I  L    K+ +AL   +RM+  G    V TY  LI G 
Sbjct: 456 KFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGL 515

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
              HR ++A+KL D M  KG +P   S+  +   LC                        
Sbjct: 516 FKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCL----------------------- 552

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            G++  A +++++++ MG IP+   +  ++N  C+ G  +QA K+   +   G +     
Sbjct: 553 SGKVARACKILDELAPMGVIPET-AFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRV 611

Query: 377 YTAFLNGLCHNGKSLEAREMINT 399
            T  +N L   G +  A +++++
Sbjct: 612 RTILINALRKAGNADLAMKLMHS 634


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 228/469 (48%), Gaps = 25/469 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  +G+    E  + L+  + +  +   A  + + M +  +  ++   N  I+VL    K
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L KA  F+  M+ +G+ PN++TYN ++ GYC   R++ A  ++  M  +   PD  +Y +
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  +CK                       QGR+EEA ++  +M Q G  P  V Y  ++
Sbjct: 297 LISGMCK-----------------------QGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +GFC  G LD A     +M   G  P   +Y + ++ L    ++ EA  MI   +E+  +
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+AITY+++++G  R     +A  +  EM+  G  PT      L+  L ++ +M  A   
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            ++  ++G   +V+ F +LI G C   +++ A  LL DM   K  PD VT+ TI+    +
Sbjct: 454 FKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--A 584
            G+VEEA EL  +M  +G+ P  +++ T+I  Y + G ++D  ++  +ML      T   
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           YN +++ LC     + A ++L +++      D +T   L+E      IP
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIP 622



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 211/428 (49%), Gaps = 12/428 (2%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L +  K    + A  +   M R  I+     F+ ++    + GKL+ A   +  M+ + 
Sbjct: 192 LLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSG 251

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           V PN++  NT +H      ++  A   L  M+   I P+  TY  LI G C   R+++A 
Sbjct: 252 VKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEAS 311

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI---KEVRDLMEK------MVNDSNLFHD- 316
           K+ +EM  KG  P  V Y T++   C +  +      +D M K      M   ++L H  
Sbjct: 312 KIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHAL 371

Query: 317 --QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             + R +EA+ ++ ++ + G  PD +TY  ++NG+CR     +A  +  +M   G KP  
Sbjct: 372 FMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTK 431

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +YT+ L+ L    +  EA ++      E   P+ I ++ ++ G      +  A +++++
Sbjct: 432 KTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKD 491

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M +    P  V  N ++Q  CREGK++ A++   E   +G   + ++F +LI G+ ++GD
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGD 551

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           +++A  + ++M     +P  +TY  ++  L KN   + A EL+ +M+SKG+ P   TY T
Sbjct: 552 IKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFT 611

Query: 555 VIHRYCQV 562
           +I    +V
Sbjct: 612 LIEGIAKV 619



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 222/450 (49%), Gaps = 14/450 (3%)

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           + ++ LIK  CD++R  +A +    M  KG  P   +  +++    K  R +    L  +
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 307 M----VNDS--------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
           M    +  S        N+   +G++++AK+ V  M   G  P++VTY  +V+G+C  G 
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           ++ A  +L  M     +P++ +Y + ++G+C  G+  EA ++     ++   P+A+ Y+ 
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ G   +G L  A     EM+KKG  PT    N LI +L  E + D A+  ++E   KG
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
            + + + +  LI G+C+  + ++A  L D+M      P   TYT+++  LSK  R++EA 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENL 592
           +L  K+ S+G++P V+ +  +I  +C    V+   +LL+ M  +        +N +++  
Sbjct: 452 DLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G +EEA ++  ++ R   K D  + + L+  Y  +G    A++V   M +    P +
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTV 571

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
                + + L    + + A+ L+   V +G
Sbjct: 572 LTYNALVQGLCKNQEGDLAEELLKEMVSKG 601



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 175/361 (48%), Gaps = 27/361 (7%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           ++ +   D   Y  ++  + K    + A ++   M ++G+  RP A  Y  L+  +   G
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGL--RPSAVIYNTLIDGFCNKG 340

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
            L  A      M K  ++P +   N+ IH L +  +  +A   ++ +Q  GI+P+ +TYN
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI GYC     K A  L DEM   G  P K +Y +++  L K+ R+KE  DL +K+ ++
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                                  G +PDV+ + A+++G C    +  A ++L+ M     
Sbjct: 461 -----------------------GVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKV 497

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            P+ V++   + G C  GK  EARE+ +  +     P+ I+++ ++ G  R G + +A  
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           V  EM+  GF PT +  N L+Q LC+  + D A++ ++E ++KG   +   + +LI G  
Sbjct: 558 VRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617

Query: 491 Q 491
           +
Sbjct: 618 K 618



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 145/312 (46%), Gaps = 2/312 (0%)

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           +++ +   +   C   ++ EA E   T +E+   P   T + ++    +  +   A  + 
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            EM +     +    N++I  LC+EGK+  AK F+      G   N+V + +++ G+C  
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G +E A ++L  M   K +PD+ TY ++I  + K GR+EEA+++  +M+ KGL P+ V Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
            T+I  +C  G ++      ++ML K      + YN +I  L      +EA  ++ ++  
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                DA T ++L+  Y        A+ +   M    + P  K    +   L  + + +E
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 671 ADTLMLRFVERG 682
           AD L  +    G
Sbjct: 450 ADDLFKKITSEG 461



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 2/237 (0%)

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           E  E +  S +     ++I +  ++       +  EA +    M +KG  PT    N L+
Sbjct: 134 EIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLL 193

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
               +  + + A     E        +V  F  +I   C++G L++A   +  M      
Sbjct: 194 SLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVK 253

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P+ VTY TI+     +GRVE A  ++  M  + + P   TY ++I   C+ GR+E+  K+
Sbjct: 254 PNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKI 313

Query: 572 LEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            E+M+ K  +     YN +I+  C+ G L+ A     ++L+       ST + L+ +
Sbjct: 314 FEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA 370



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 112/235 (47%), Gaps = 18/235 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRL---MARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           D I Y +++    +   C  AK+   L   M   GI+   + ++ L+   S+  +++ A 
Sbjct: 395 DAITYNILINGYCR---CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   +    V P++++ N  I      + +  A   L+ M    + P+ +T+N +++G+
Sbjct: 452 DLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMVNDSN 312
           C   ++++A +L DEM  +G  PD +S+ T++    +   IK+      ++++   N + 
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTV 571

Query: 313 LFHD---QGRIEE-----AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
           L ++   QG  +      A+EL+ +M   G  PD  TY  ++ G  +V   D+ K
Sbjct: 572 LTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/557 (26%), Positives = 263/557 (47%), Gaps = 15/557 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++ + K         +L  M  RG       F+ ++VA    G +  A+ + 
Sbjct: 254 DAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLK 313

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M       NL++  + +        L  AL    ++   G+ PN +TY+ LI+G C+ 
Sbjct: 314 EEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 373

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVN--DSNLFH- 315
             I+ A +L  +M L G  P   +  +++ GYL K    +E   L ++ V+   +N+F  
Sbjct: 374 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYL-KAPLWEEASKLFDEAVDCGVANIFTY 432

Query: 316 --------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     G+++EA  L++ M   G +P+VV+Y  ++ G CR G +D A  +   M  
Sbjct: 433 NIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLA 492

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
              KPN V+Y+  ++G    G S +A ++ +        P   T++ +++GL + G++SE
Sbjct: 493 RDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSE 552

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A D ++  +++GF P+ +  N ++    +EG +D A    +E    G + NVV +TSLI 
Sbjct: 553 ARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLIN 612

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC+   ++ AL   D+M     + D   Y+ +ID   K   +E A +L  ++L  GL P
Sbjct: 613 GFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSP 672

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ-KCRTA-YNQVIENLCSFGYLEEAGKIL 605
             + Y ++I  +  +  +E  L   +KM++ +  C    Y  +I+ L   G L  A  + 
Sbjct: 673 NRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLY 732

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            ++L      D  T HVLV    NKG    A K+   M  +N+ P + +   +      E
Sbjct: 733 MEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFRE 792

Query: 666 GKSEEADTLMLRFVERG 682
           G  +EA TL    ++RG
Sbjct: 793 GNLKEAFTLHDEMLDRG 809



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 140/587 (23%), Positives = 251/587 (42%), Gaps = 71/587 (12%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR-------- 162
           I A+L    D + AL++F  A+ Q  +      Y ++L IL ++    G  R        
Sbjct: 64  IDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVS 123

Query: 163 -------------VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAP 209
                        ++    R   E     F+YL+ AY RA ++ NA+   + M    V P
Sbjct: 124 GDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIP 183

Query: 210 NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT--------------------- 248
            +   N  +  LV  N + +      +M L GI  +  T                     
Sbjct: 184 WVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYF 243

Query: 249 --------------YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
                         Y+ +I+  C        ++L++EM  +G  P + ++ +V+     +
Sbjct: 244 RETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQ 303

Query: 295 KRIKEVRDLMEKMVN---DSNL---------FHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
             + E   L E+M+N     NL         +  QG ++ A  L N++++ G  P+ VTY
Sbjct: 304 GNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTY 363

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           + ++ G C  G +++A ++  QM  +G  P+  +  + L G        EA ++ + +  
Sbjct: 364 SVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA-V 422

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
           +    N  TY+++M  L + GK+ EAC ++  MV +G  P  V  N +I   CR+G MD 
Sbjct: 423 DCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDM 482

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A     + L +    NVV ++ LI G  +KGD E+AL L D M      P   T+ TII+
Sbjct: 483 ASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIIN 542

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQK 580
            L K G++ EA + +   L +G +P+ +TY +++  + + G ++  L +  +M       
Sbjct: 543 GLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSP 602

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
               Y  +I   C    ++ A K   ++     + D +    L++ +
Sbjct: 603 NVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF 649



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 183/392 (46%), Gaps = 12/392 (3%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            ++ +M    + GK+  A  +L  M    + PN++  N  I        +  A      M
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 490

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
               + PNV+TY+ LI G       + A+ L D+M     +P   ++ T++  LCK  ++
Sbjct: 491 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 550

Query: 298 KEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            E RD ++  + +  +            F  +G I+ A  +  +M + G  P+VVTYT++
Sbjct: 551 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 610

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           +NGFC+   +D A K   +M   G + +  +Y+A ++G C       A+++     E   
Sbjct: 611 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 670

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           +PN I Y+ ++ G R    +  A    ++M+             LI  L +EG++  A  
Sbjct: 671 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 730

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
              E L+KG   +++ F  L+ G C KG LE A  +L++M      P  + Y T+I    
Sbjct: 731 LYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYF 790

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           + G ++EA  L  +ML +GLVP  VTY  +I+
Sbjct: 791 REGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 822



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 174/366 (47%), Gaps = 12/366 (3%)

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           N +    RIE A +  N M     IP V     ++    R   + + + +  +M   G  
Sbjct: 158 NAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIY 217

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            +  +    +      G+  EA E    ++E     +A  YS+++  + ++   +   ++
Sbjct: 218 GDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLEL 277

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           + EM ++G+ P+      +I +   +G M  A +  +E +N G  +N+V  TSL++G+C 
Sbjct: 278 LEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCA 337

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           +G+L+ AL+L + +      P+ VTY+ +I+    +G +E+A+EL  +M   G+ P+V  
Sbjct: 338 QGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFN 397

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA----YNQVIENLCSFGYLEEAGKILGK 607
             +++  Y +    E+  KL ++ +    C  A    YN ++  LC  G ++EA  +L  
Sbjct: 398 VNSLLRGYLKAPLWEEASKLFDEAVD---CGVANIFTYNIMMSWLCKGGKMDEACSLLDN 454

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           ++      +  + + ++  +  KG   +A  V   M  R+L P++     V+  ++++G 
Sbjct: 455 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNV-----VTYSILIDGN 509

Query: 668 SEEADT 673
            ++ D+
Sbjct: 510 FKKGDS 515



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/344 (21%), Positives = 140/344 (40%), Gaps = 57/344 (16%)

Query: 102 LLRSLKPRQICAVLR-----SQADERVALQFFYWADRQWRYRHDP--IVYYMMLEILSKT 154
           L R LKP  +   +       + D   AL  F   D+       P    +  ++  L K 
Sbjct: 491 LARDLKPNVVTYSILIDGNFKKGDSEKALDLF---DQMLSLNIAPTDFTFNTIINGLCKV 547

Query: 155 KLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
                A+  L+     G       ++ ++  + + G + +A+ V   M +  V+PN++  
Sbjct: 548 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 607

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
            + I+     N++  AL+  + M+  G+  +V  Y+ LI G+C    ++ A  L  E+  
Sbjct: 608 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 667

Query: 275 KGCSPDKV-----------------------------------SYYTVMGYLCKEKRIKE 299
            G SP+++                                   +Y T++  L KE R+  
Sbjct: 668 VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVF 727

Query: 300 VRDLMEKM-----VNDSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
             DL  +M     V D   FH       ++G++E A++++ +M +    P V+ Y  ++ 
Sbjct: 728 ASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIA 787

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
           G+ R G L +A  +  +M   G  P+ V+Y   +NG     +SL
Sbjct: 788 GYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSL 831


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 218/434 (50%), Gaps = 37/434 (8%)

Query: 174 CRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           C P     LM    + G++ +  +V   M +  + P L+  N  I+ L    KL KA   
Sbjct: 131 CNP-----LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDI 185

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK---LIDEMPLKGCSPDKVSYYTVMGY 290
           +E M++ G++ NV+TYN LI GYC + +I    K   ++ EM   G  P++V++  ++  
Sbjct: 186 IEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDG 245

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            CK+K                        +  A ++  +M++ G  P+VVTY +++NG C
Sbjct: 246 FCKDK-----------------------NVSAAMKVFAEMNRQGVKPNVVTYNSLINGLC 282

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
             G++++A  +  QM +   KPN +++ A LNG C N    +A E+ +   ++  TPN  
Sbjct: 283 NNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVT 342

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY++++    ++  + +A  + R M+ KG  P     N LI  LCR+G ++ A+  + E 
Sbjct: 343 TYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEM 402

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSKNG 528
             K    +++ +  LI   C KG++++AL LLD+M  C+K   P  +TY T+ID   K G
Sbjct: 403 DTKHLKADLITYNILIDSLCNKGEMKKALRLLDEM--CRKGLKPSQLTYNTMIDGYCKEG 460

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYN 586
            +  A  L  +M   G +  V TY  +I  +C+  ++ED   LL +ML K     R  Y 
Sbjct: 461 NLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYE 520

Query: 587 QVIENLCSFGYLEE 600
            V E +   G++ +
Sbjct: 521 IVTEEMMEKGFVPD 534



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 210/405 (51%), Gaps = 26/405 (6%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I P ++++N +I G C + ++  A  +I++M ++G S + ++Y T++   CK  +I    
Sbjct: 159 IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKI---- 214

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                           G++ +A  ++ +M   G  P+ VT+  +++GFC+   +  A K+
Sbjct: 215 ----------------GKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKV 258

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             +M   G KPN V+Y + +NGLC+NGK  EA  + +        PN IT++ +++G  +
Sbjct: 259 FAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCK 318

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
              + +A ++  +M K+G  P     N+LI + C++  M+ A    +  L KG   +V  
Sbjct: 319 NKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVST 378

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +  LI G C+KGDLE A +L+ +M       D +TY  +ID+L   G +++A  L+ +M 
Sbjct: 379 YNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMC 438

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLE 599
            KGL P+ +TY T+I  YC+ G +   L L  +M  + +      YN +I+  C    LE
Sbjct: 439 RKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLE 498

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKG-IPLLA---YKVA 640
           +A  +L ++L      +  T  ++ E  + KG +P +    YKVA
Sbjct: 499 DANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKVA 543



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 191/412 (46%), Gaps = 28/412 (6%)

Query: 125 LQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV 184
           ++F Y    + R     I + +++  L K      A  ++  M  RG+      ++ L+ 
Sbjct: 147 MEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLID 206

Query: 185 AYSRAGKLRNAMY----VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
            Y + GK+   MY    +L  M+   + PN +  N  I        ++ A++    M   
Sbjct: 207 GYCKMGKI-GKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQ 265

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G+ PNV+TYN LI G C+  ++ +A  L D+M      P+ +++  ++   CK K +K  
Sbjct: 266 GVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVK-- 323

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                                +A EL + M + G  P+V TY  +++ +C+   ++ A  
Sbjct: 324 ---------------------QAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFA 362

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           + + M   G  P+  +Y   + GLC  G    AR +++  + +    + ITY++++  L 
Sbjct: 363 LYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLC 422

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
            +G++ +A  ++ EM +KG  P+ +  N +I   C+EG +  A     +    G   NV 
Sbjct: 423 NKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVA 482

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            +  LI+GFC+K  LE+A  LL++M      P+ +TY  + + + + G V +
Sbjct: 483 TYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 164/331 (49%), Gaps = 5/331 (1%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           E   + S  G    V +   +++G  +VGE+   + + ++M     +P  +S+   +NGL
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG---LRREGKLSEACDVVREMVKKGFF 441
           C  GK  +A ++I   +    + N ITY+ ++ G   + + GK+ +A  +++EM   G  
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGIC 233

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N+LI   C++  +  A K   E   +G   NVV + SLI G C  G + EA +L
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            D M      P+ +T+  +++   KN  V++A EL   M  +G+ P V TY  +I  YC+
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353

Query: 562 VGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
              +ED   L   ML K  C   + YN +I  LC  G LE A  ++ ++     KAD  T
Sbjct: 354 DENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLIT 413

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            ++L++S  NKG    A ++   M  + L P
Sbjct: 414 YNILIDSLCNKGEMKKALRLLDEMCRKGLKP 444



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 92/184 (50%), Gaps = 5/184 (2%)

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G  ++V +   L+ G  + G++ +   +  +M   + +P  +++  +I+ L K G++ +A
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK---LLEKMLSKQKC--RTAYNQV 588
            +++  M  +G+   V+TY T+I  YC++G++  + K   +L++M +   C     +N +
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I+  C    +  A K+  ++ R   K +  T + L+    N G    A  +  +M N  L
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302

Query: 649 IPDL 652
            P++
Sbjct: 303 KPNI 306


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/561 (25%), Positives = 248/561 (44%), Gaps = 36/561 (6%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWRYRHD-----PIVYYMMLEILSKTKLCQGA 160
           L+ R  C  + +      A+    W D  W+   D      IV    L I+    LC+  
Sbjct: 180 LRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNA-LCKDG 238

Query: 161 KR-----VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           K       L  M  +G+      ++ L+ AY R G +  A  ++  M    + P L   N
Sbjct: 239 KLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYN 298

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             I+ L       +A R L+ M   G+ PN  T+N ++   C    + +A ++ +EM  +
Sbjct: 299 ALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQR 358

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
           G  PD +S+ +++G                       +F   G +  A     +M  +G 
Sbjct: 359 GVVPDLISFSSIVG-----------------------VFSRNGELGRALAYFEKMKGVGL 395

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           +PD V YT ++NG+CR  ++  A KM  +M   GC  + V+Y   LNGLC      +A E
Sbjct: 396 VPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADE 455

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +     E    P+  T + ++HG  ++G +++A  +   M  +   P  V  N L+   C
Sbjct: 456 LFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFC 515

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + G+M+ AK+   + +++    + ++F+ LI GFC  G + EA  L D+M      P  V
Sbjct: 516 KVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLV 575

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           T  TII    + G + +A + +  M+S+G+ P  +TY T+I+ + +    +    L+  M
Sbjct: 576 TCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNM 635

Query: 576 LSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
             +        YN ++      G ++EA  +L K++      D ST   L+  Y++K   
Sbjct: 636 EERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNM 695

Query: 634 LLAYKVACRMFNRNLIPDLKL 654
             A++V   M  R  +PD K 
Sbjct: 696 KEAFRVHDEMLQRGFVPDDKF 716



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 132/552 (23%), Positives = 258/552 (46%), Gaps = 26/552 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +V+ +++    + +  +      +L+ +RG      A + L+ A  + G +  A  V   
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
             K+    N+   N  ++ L    KL     +L  M+  G+  +++TYN L+  YC    
Sbjct: 215 FVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A  L+D M  KG  P   +Y  ++  LCKE                       G  E
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKE-----------------------GSYE 311

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            AK ++++M  +G  P+  T+  ++   CR  ++ +A+++  +M   G  P+ +S+++ +
Sbjct: 312 RAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIV 371

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
                NG+   A       +     P+ + Y+++++G  R   +S A  +  EMV++G  
Sbjct: 372 GVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCV 431

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
              V  N L+  LCR   +D A +  +E + +G   +    T+LI G+C+ G++ +ALSL
Sbjct: 432 MDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSL 491

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            + M L    PD VTY T++D   K G +E+A EL   M+S+ + P+ +++  +I+ +C 
Sbjct: 492 FETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCS 551

Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
           +G V +  +L ++M  K  +      N +I+     G L +A   L  ++      D  T
Sbjct: 552 LGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCIT 611

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
            + L+ S++ +     A+ +   M  R L+P+L     +       G+ +EA+ ++ + +
Sbjct: 612 YNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMI 671

Query: 680 ERGHIQPKSEEH 691
           ++G I P    +
Sbjct: 672 DKG-INPDKSTY 682


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 148/563 (26%), Positives = 255/563 (45%), Gaps = 20/563 (3%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSM 201
           Y ++L+ L    + Q A  + ++MA+ G  C P   +Y  V   + + G+   A  +   
Sbjct: 231 YSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHE 290

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  V P+++  N  I  L     + KA   L +M   G  P+ +TYNC+I GY  L R
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGR 350

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSN 312
           +K+A K+  +M  +G  P+ V   + +  LCK  R KE  ++ + M         V+   
Sbjct: 351 LKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCT 410

Query: 313 LFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L H    +G   +   L N M   G   D   +  +++ + + G +D A  +  +M   G
Sbjct: 411 LLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQG 470

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             P+ V+Y+  ++     G+  +A E  N        PN   Y  ++ G    G L +A 
Sbjct: 471 VSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAK 530

Query: 430 DVVREMVKKGFFPTP--VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           ++V EM+ KG  P P  V  N +I SLC++G++  A        + G   +V+ FTSLI 
Sbjct: 531 ELVSEMINKG-IPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLID 589

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G+C  G +++A  +LD M +   + D VTY+T++D   KNGR+ +   L  +M  KG+ P
Sbjct: 590 GYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKP 649

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKIL 605
             VTY  ++    + GR     K   +M+      T   Y  ++  LC     +EA  + 
Sbjct: 650 NTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILF 709

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            K+     K   +  + ++ +         A ++   +    L+P+      +   L+ +
Sbjct: 710 QKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKD 769

Query: 666 GKSEEADTLMLRFVERGHIQPKS 688
           G  E+A+  M   +E+  I P S
Sbjct: 770 GAVEDANN-MFSSMEKSGIVPGS 791



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/551 (23%), Positives = 254/551 (46%), Gaps = 27/551 (4%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A   F+   RQ   + D + Y ++++ L K +    A+ VLR M   G +     ++ ++
Sbjct: 284 ACSLFHEMTRQG-VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMI 342

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             Y+  G+L+ A  +   M+   + PN++ICN+ +  L    +  +A    + M   G  
Sbjct: 343 HGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHK 402

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P++++Y  L+ GY       D I L + M   G + D   +  ++               
Sbjct: 403 PDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILI--------------- 447

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   + +  +G +++A  +  +M Q G  PDVVTY+ V++ F R+G L  A +   
Sbjct: 448 --------HAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFN 499

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT-PNAITYSVVMHGLRRE 422
           QM   G +PNT  Y + + G C +G  ++A+E+++    +    P+ + ++ V++ L ++
Sbjct: 500 QMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKD 559

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G++ +A D+   +   G  P  +    LI   C  GKMD A K +      G   ++V +
Sbjct: 560 GRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTY 619

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           ++L+ G+ + G + + L+L  +M      P+TVTY  ++  L + GR   A +   +M+ 
Sbjct: 620 STLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIE 679

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEE 600
            G   TV  Y  ++   C+    ++ + L +K+  ++ +   T  N +I  +      EE
Sbjct: 680 SGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEE 739

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           A ++   +  +    + ST  V++ + L  G    A  +   M    ++P  +L  ++  
Sbjct: 740 AKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIR 799

Query: 661 RLILEGKSEEA 671
            L+ +G+  +A
Sbjct: 800 MLLEKGEIAKA 810



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 237/518 (45%), Gaps = 30/518 (5%)

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR-FLE 235
             +S LM    RA +    + +   + +  +  + +  +T +  L   N+  +A+   L 
Sbjct: 158 HTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLH 217

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG--CSPDKVSYYTVMGYLCK 293
           RM   G  PNV +Y+ ++KG CD    + A+ L   M  +G  CSP+ V+Y TV+     
Sbjct: 218 RMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVI----- 272

Query: 294 EKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
                             + F  +G   +A  L ++M++ G  PDVVTY  +++  C+  
Sbjct: 273 ------------------HGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKAR 314

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            +D+A+ +L+QM  +G +P+TV+Y   ++G    G+  EA +M    +     PN +  +
Sbjct: 315 AMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICN 374

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
             +  L + G+  EA ++   M  KG  P  V    L+     EG             + 
Sbjct: 375 SFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSN 434

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G A +   F  LI  + ++G +++A+ +  +M      PD VTY+T+I A S+ GR+ +A
Sbjct: 435 GIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDA 494

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIE 590
            E   +M+++G+ P    Y ++I  +C  G +    +L+ +M++K   R     +N VI 
Sbjct: 495 MEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVIN 554

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
           +LC  G + +A  I   V     + D  T   L++ Y   G    A+K+   M    +  
Sbjct: 555 SLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVET 614

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           D+     + +     G+  +  TL  R ++R  ++P +
Sbjct: 615 DIVTYSTLLDGYFKNGRINDGLTL-FREMQRKGVKPNT 651



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 176/410 (42%), Gaps = 47/410 (11%)

Query: 323 AKELVNQMSQMGCIPDVV-----TYTAVVNGFCRVGELD--------------------- 356
           A  L N++ +    P VV     TY+ +++  CR    D                     
Sbjct: 136 ALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITA 195

Query: 357 ---------------QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
                              +L +M   GC PN  SY+  L GLC N  S  A ++     
Sbjct: 196 STLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMA 255

Query: 402 EEWW--TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
           +E    +PN + Y+ V+HG  +EG+  +AC +  EM ++G  P  V  NL+I +LC+   
Sbjct: 256 KEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           MD A+  +++    G   + V +  +I G+   G L+EA  +   M      P+ V   +
Sbjct: 316 MDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNS 375

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK- 578
            + +L K+GR +EA E+   M +KG  P +V+Y T++H Y   G   D++ L   M S  
Sbjct: 376 FLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNG 435

Query: 579 --QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
               CR  +N +I      G +++A  I  ++ +     D  T   ++ ++   G    A
Sbjct: 436 IAADCRV-FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDA 494

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
            +   +M  R + P+  +   + +   + G   +A  L+   + +G  +P
Sbjct: 495 MEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRP 544



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 168/387 (43%), Gaps = 13/387 (3%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +Q     D + Y  ++   S+      A      M  RGI+     +  ++  +   G L
Sbjct: 467 QQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGL 526

Query: 193 RNAMYVLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
             A  ++S M+ K    P+++  N+ I+ L    ++  A    + +   G  P+V+T+  
Sbjct: 527 VKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTS 586

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE----VRDLMEKM 307
           LI GYC + ++  A K++D M + G   D V+Y T++    K  RI +     R++  K 
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKG 646

Query: 308 VNDSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
           V  + + +          GR   A++  ++M + G    V  Y  ++ G CR    D+A 
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI 706

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            + Q++     K +       +N +    +  EA+E+  T       PN  TY V++  L
Sbjct: 707 ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINL 766

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            ++G + +A ++   M K G  P    +N +I+ L  +G++  A  ++ +   K   +  
Sbjct: 767 LKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEA 826

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMY 506
              + ++  F +KG   E + LL   Y
Sbjct: 827 STTSLMLSLFSRKGKYHEDMKLLPAKY 853


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 232/490 (47%), Gaps = 32/490 (6%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R+G+   A  VL  + K         CN  +  L    +  +    L  M+   I PNV+
Sbjct: 282 RSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVV 341

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS-----PDKVSYYTVMGYLCKEKRIKEVRD 302
           T+  LI   C   R+ +A+++ ++M     +     PD ++Y T++  LCK         
Sbjct: 342 TFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCK--------- 392

Query: 303 LMEKMVNDSNLFHDQGRIEEAKELVNQM-SQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                          GR EE   LV +M SQ  C+P+ VTY  +++G+C+   ++ A+++
Sbjct: 393 --------------VGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAAREL 438

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             QM   G  PN V+    ++G+C +G+   A E  N  + +    NA+TY+ ++     
Sbjct: 439 FDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCN 498

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
              + +A ++  EM++ G  P  +    LI  L + GK+D A   + +    G + ++V+
Sbjct: 499 VNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVS 558

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           F  LI GFC+K  L+EA  +L +M      PD VTY T+I   SK G    A  LM KM+
Sbjct: 559 FNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMV 618

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYL 598
            +GLVPTVVTY  +IH YC  G +++ +K+   M S  K       YN +I +LC    +
Sbjct: 619 KEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQV 678

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           + A  ++  +     K + +T + + +    K     A+++  RM      PD    + +
Sbjct: 679 DLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738

Query: 659 SERLILEGKS 668
           +E L   G++
Sbjct: 739 TEWLSAVGET 748



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 228/456 (50%), Gaps = 25/456 (5%)

Query: 154 TKLCQGAKR-----VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVA 208
           ++LC+  +      VL  + + G      + + L+ A  RA + +    +L+ M++  + 
Sbjct: 278 SRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQ 337

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAG-----ITPNVLTYNCLIKGYCDLHRIK 263
           PN++     I+ L    ++ +AL   E+M         + P+V+TYN LI G C + R +
Sbjct: 338 PNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQE 397

Query: 264 DAIKLIDEMPLKG-CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NLF 314
           + + L++ M  +  C P+ V+Y  ++   CK   I+  R+L ++M  D         N  
Sbjct: 398 EGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTL 457

Query: 315 HD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            D     GRI  A E  N+M   G   + VTYTA++  FC V  +++A ++  +M   GC
Sbjct: 458 VDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGC 517

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            P+ + Y   ++GL   GK   A  +++  +E  ++P+ ++++V+++G  R+ KL EA +
Sbjct: 518 SPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYE 577

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +++EM   G  P  V  N LI    + G    A + M++ + +G    VV + +LI  +C
Sbjct: 578 MLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYC 637

Query: 491 QKGDLEEALSLLDDMYLCKK-DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
             G+L+EA+ +  DM    K  P+TV Y  +I++L +  +V+ A  LM  M  KG+ P  
Sbjct: 638 LNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNT 697

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY 585
            T+  +     +   +    +L+++M ++  C   Y
Sbjct: 698 NTFNAMFKGLQEKNWLSKAFELMDRM-TEHACNPDY 732



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 192/393 (48%), Gaps = 29/393 (7%)

Query: 140 DPIVYYMMLEILSKT-KLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAM 196
           D I Y  +++ L K  +  +G   V R+  R    C P   +Y  L+  Y +A  +  A 
Sbjct: 379 DVITYNTLIDGLCKVGRQEEGLGLVERM--RSQPRCMPNTVTYNCLIDGYCKASMIEAAR 436

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   M K  V PN++  NT +  +    ++  A+ F   MQ  G+  N +TY  LI+ +
Sbjct: 437 ELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAF 496

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C+++ I+ A++L DEM   GCSPD + YYT++  L +                       
Sbjct: 497 CNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQ----------------------- 533

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            G+++ A  ++++M + G  PD+V++  ++NGFCR  +LD+A +ML++M + G KP+ V+
Sbjct: 534 AGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVT 593

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   ++     G    A  ++    +E   P  +TY  ++H     G L EA  + R+M 
Sbjct: 594 YNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMS 653

Query: 437 KKGFFPTPVEI-NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
                P    I N+LI SLCR+ ++D A   M +   KG   N   F ++ +G  +K  L
Sbjct: 654 STSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWL 713

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
            +A  L+D M     +PD +T   + + LS  G
Sbjct: 714 SKAFELMDRMTEHACNPDYITMEILTEWLSAVG 746



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 111/481 (23%), Positives = 204/481 (42%), Gaps = 97/481 (20%)

Query: 250 NCLIKGYCDLHRIKDAIKLIDEM--PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           N LI       R+ DA+ L+DEM  P     P+  + + V   L K       RD + + 
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSK-------RDKVGRA 248

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA--------- 358
           V++          EE   LV++ ++    P+ +  T +++  CR G  D+A         
Sbjct: 249 VDE----------EEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMK 298

Query: 359 --------------------------KKMLQQMYHHGCKPNTVSYTAFLNGLC---HNGK 389
                                       +L +M     +PN V++   +N LC      +
Sbjct: 299 LGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDE 358

Query: 390 SLEAREMINTSEEEWW--TPNAITYSVVMHGLRREGKLSEACDVVR-------------- 433
           +LE  E +N  E   +   P+ ITY+ ++ GL + G+  E   +V               
Sbjct: 359 ALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVT 418

Query: 434 ----------------------EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
                                 +M K G  P  V +N L+  +C+ G+++GA +F  E  
Sbjct: 419 YNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQ 478

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            KG   N V +T+LIR FC   ++E+A+ L D+M      PD + Y T+I  LS+ G+++
Sbjct: 479 GKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLD 538

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVI 589
            A+ ++ KM   G  P +V++  +I+ +C+  ++++  ++L++M +   +     YN +I
Sbjct: 539 RASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLI 598

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
            +    G    A +++ K+++        T   L+ +Y   G    A K+   M + + +
Sbjct: 599 SHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKV 658

Query: 650 P 650
           P
Sbjct: 659 P 659


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 260/561 (46%), Gaps = 16/561 (2%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
           V+  +  +L +  + + A +    M +  +  +  + +  +   S+AG+   +      M
Sbjct: 64  VFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDM 123

Query: 203 QKAAVAPNLLICNTAI-HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
             A +AP +   N  I HV   G+ L  A    E+M+  G+TP+++TYN LI GY  +  
Sbjct: 124 VGAGIAPTVFTYNIMIGHVCKEGDMLT-ARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGL 182

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK---------RIKEVRDLMEKMVNDSN 312
           + +++ L +EM   GC PD ++Y  ++   CK K         R  + +DL   +++ S 
Sbjct: 183 LDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYST 242

Query: 313 LFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L      +G ++ A +    M+++G +P+  TY+++++  C+ G L +A  +  +M    
Sbjct: 243 LIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEH 302

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
              N V+YT  L+GLC  G   EA E+     +   TPN   Y+ ++HG  +   + +A 
Sbjct: 303 VDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAM 362

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           ++  EM +K   P  +    ++  LC E K++  K  M E    G   N V +T+L+  +
Sbjct: 363 ELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAY 422

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
            + G+  EA++LL++M     +   VT+  +ID L K G V+EA     +M    L P V
Sbjct: 423 FKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNV 482

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGK 607
             Y  +I   C+   + D  KL ++M  K     + AY  +I+     G  +EA  +  K
Sbjct: 483 AVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNK 542

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           ++    + D      LV      G    A K    M  + +IPD  LC ++  +    G 
Sbjct: 543 MMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGN 602

Query: 668 SEEADTLMLRFVERGHIQPKS 688
            +EA  L    VE+G I   S
Sbjct: 603 IDEAIELQNELVEKGLIHGNS 623



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/517 (22%), Positives = 218/517 (42%), Gaps = 72/517 (13%)

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK- 267
           P   + +    VLV    L  A +   RM    + P   + N        LHR+  A + 
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAF------LHRLSKAGEG 113

Query: 268 -----LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
                   +M   G +P   +Y  ++G++CKE                       G +  
Sbjct: 114 DLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKE-----------------------GDMLT 150

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A+ L  QM +MG  PD+VTY  +++G+ ++G LD++  + ++M   GC+P+ ++Y A +N
Sbjct: 151 ARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALIN 210

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
             C     L A E     +++   PN I+YS ++  L +EG +  A     +M + G  P
Sbjct: 211 SFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLP 270

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG--------- 493
                + LI + C+ G +  A     E L +   +N+V +T+L+ G C++G         
Sbjct: 271 NEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELF 330

Query: 494 --------------------------DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
                                      +++A+ L ++M      PD + + TI+  L   
Sbjct: 331 RAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSE 390

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAY 585
            ++EE   +M +M   G+    V Y T++  Y + G   + + LLE+M  L  +     +
Sbjct: 391 SKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTF 450

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
             +I+ LC  G ++EA    G++     + + +    L++          A K+   M +
Sbjct: 451 CALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQD 510

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +N+IPD      + +  +  G  +EA  +  + +E G
Sbjct: 511 KNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMG 547



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/480 (22%), Positives = 214/480 (44%), Gaps = 47/480 (9%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+ +   M + G+      ++ L+  Y + G L  ++ +   M+     P+++  N  I+
Sbjct: 151 ARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALIN 210

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A  F   M+   + PNV++Y+ LI   C    ++ AIK   +M   G  P
Sbjct: 211 SFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLP 270

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNLFH---------DQGRIEEAKELV 327
           ++ +Y +++   CK   + E   L ++M+    D N+           ++G + EA+EL 
Sbjct: 271 NEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELF 330

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
             M + G  P++  YTA+++G  +V  +D+A ++  +M     KP+ + +   + GLC  
Sbjct: 331 RAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSE 390

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            K  E + ++   +E     N + Y+ +M    + G  +EA +++ EM   G   T V  
Sbjct: 391 SKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTF 450

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             LI  LC+ G +  A  +     +     NV  +T+LI G C+   + +A  L D+M  
Sbjct: 451 CALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQD 510

Query: 508 CKKDPDTVTYTTIIDA-----------------------------------LSKNGRVEE 532
               PD + YT +ID                                    LS+ G+V++
Sbjct: 511 KNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQ 570

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENL 592
           A + + +M+ KG++P       ++ ++ ++G +++ ++L  +++ K       N  + N+
Sbjct: 571 ARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLIHGNSNPAVPNI 630



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C+P    + A+ +    +G L+ A +   +M      P   S  AFL+ L   G+   +R
Sbjct: 58  CVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSR 117

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +           P   TY++++  + +EG +  A  +  +M K G  P  V  N LI   
Sbjct: 118 DFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGY 177

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            + G +D +    +E    GC  +V+ + +LI  FC+   +  A     +M      P+ 
Sbjct: 178 GKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNV 237

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           ++Y+T+IDAL K G ++ A +  + M   GL+P   TY ++I   C+ G + +   L ++
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADE 297

Query: 575 MLSKQK--CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           ML +        Y  +++ LC  G + EA ++     R   KA  +       + ++  I
Sbjct: 298 MLQEHVDLNIVTYTTLLDGLCEEGMMNEAEEL----FRAMGKAGVTPNLQAYTALIHGHI 353

Query: 633 PLLAYKVACRMFN----RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            + +   A  +FN    +++ PD+ L   +   L  E K EE   +M    E G
Sbjct: 354 KVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESG 407


>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
           [Vitis vinifera]
          Length = 763

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 165/695 (23%), Positives = 306/695 (44%), Gaps = 113/695 (16%)

Query: 81  VCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHD 140
           +CR++  R AW+ +L+  +R+L+       +  VL    +   ALQFF W +R   +RHD
Sbjct: 93  ICRMMANR-AWTTRLQNSIRSLVPQFDHSLVWNVLHGSRNSDHALQFFRWVERAGLFRHD 151

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
              +  ++EIL +      A+ +L  M ++G+E   + F  L+ +Y +AG ++ ++ V  
Sbjct: 152 RDTHLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQ 211

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M++  V   +   +    V++   +   A R+   M   G+ P   TYN +I G+    
Sbjct: 212 KMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSL 271

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           +++ A +  +EM  +  SPD V+Y T++ GY     RIK                    +
Sbjct: 272 KVETANRFFEEMKERRISPDVVTYNTMINGYY----RIK--------------------K 307

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +EEA++   +M      P V++YT ++ G+  VG +D   ++ ++M   G KPN V+Y+ 
Sbjct: 308 MEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYST 367

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR---REGKLSEACDVVREMV 436
            L GLC   K LEA+ ++    E +  P     S+ M  +    + G+L  A DV++ M+
Sbjct: 368 LLPGLCDGEKMLEAQNVVKEMVERYIAPK--DNSIFMRLITCQCKAGQLDAAADVLKAMI 425

Query: 437 -------------------KKGFFPTPVEI------------------------NLLIQS 453
                              K G +   V++                        NL+I+ 
Sbjct: 426 RLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEY 485

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG------------------------- 488
           LC  G+   A+   ++ + KG   + + F +LIRG                         
Sbjct: 486 LCNSGQTSKAETLFRQLMKKGVQ-DPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPRE 544

Query: 489 ----------FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
                     F +KG+  +A + LD M      PD+  + +++++L ++GR++ A+ +M 
Sbjct: 545 ADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMN 604

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYL 598
            M+ KG+   +     ++      G VE+ L  ++ +L    C   ++ ++  LC+ G  
Sbjct: 605 NMVEKGVKENMDLVAKILEALLLRGHVEEALGRID-LLMNNGCEPDFDGLLSVLCAKGKT 663

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
             A K+L   L        S+   ++++ L  G  L AY + C++  +    D   CK +
Sbjct: 664 IAALKLLDFGLERDYNISFSSYENVLDALLTAGKTLNAYSILCKIMQKGGATDWSSCKDL 723

Query: 659 SERLILEGKSEEADTL--MLRFVERGHIQPKSEEH 691
              L  EG +++AD L  M++  E+ H   K ++ 
Sbjct: 724 IRSLNEEGNTKQADILSRMIKGEEKVHGSKKGKKQ 758


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 248/517 (47%), Gaps = 32/517 (6%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           P +Y   + ++SK  + + AK +   M   G+  + +A++ L+  Y R   +R    +L 
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M+K  +  +     T +  +     L  A   ++ M  +G  PNV+ Y  LIK +    
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
           R  DA++++ EM  +G +PD   Y +++  L K KR+ E R  + +MV +          
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN---------- 516

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
                        G  P+  TY A ++G+    E   A K +++M   G  PN V  T  
Sbjct: 517 -------------GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           +N  C  GK +EA     +  ++    +A TY+V+M+GL +  K+ +A ++ REM  KG 
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P      +LI    + G M  A     E + +G   NV+ +  L+ GFC+ G++E+A  
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           LLD+M +    P+ VTY TIID   K+G + EA  L  +M  KGLVP    Y T++   C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743

Query: 561 QVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTA----S 613
           ++  VE  + +     +K+ C ++   +N +I  +  FG  E   ++L +++  +     
Sbjct: 744 RLNDVERAITIFGT--NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
           K +  T +++++    +G    A ++  +M N NL+P
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 258/560 (46%), Gaps = 29/560 (5%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYV 198
           P  Y  +++ +  +    GA  +++ M   G  CRP    Y  L+  + +  +  +AM V
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASG--CRPNVVIYTTLIKTFLQNSRFGDAMRV 474

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L  M++  +AP++   N+ I  L    ++ +A  FL  M   G+ PN  TY   I GY +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
                 A K + EM   G  P+KV    ++   CK+ ++ E       MV+         
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                N      ++++A+E+  +M   G  PDV +Y  ++NGF ++G + +A  +  +M 
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  PN + Y   L G C +G+  +A+E+++    +   PNA+TY  ++ G  + G L+
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA  +  EM  KG  P       L+   CR   ++ A         KGCA +   F +LI
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALI 773

Query: 487 RGFCQKGDLE---EALS-LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
               + G  E   E L+ L+D  +     P+ VTY  +ID L K G +E A EL  +M +
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
             L+PTV+TY ++++ Y ++GR  ++  + ++ ++   +     Y+ +I      G   +
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893

Query: 601 AGKILGKVLRTASKADA-----STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD-LKL 654
           A  ++ ++    +  D      STC  L+  +   G   +A KV   M     IPD   +
Sbjct: 894 ALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATV 953

Query: 655 CKKVSERLILEGKSEEADTL 674
            + ++E  I   +  EAD +
Sbjct: 954 IELINESCISSNQRVEADAV 973



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 222/463 (47%), Gaps = 26/463 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  ++  LSK K    A+  L  M   G+  +P AF+Y   +  Y  A +  +A  
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL--KPNAFTYGAFISGYIEASEFASADK 543

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            +  M++  V PN ++C   I+      K+ +A      M   GI  +  TY  L+ G  
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              ++ DA ++  EM  KG +PD  SY  ++    K   +++   + ++MV +       
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663

Query: 312 --NL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             N+    F   G IE+AKEL+++MS  G  P+ VTY  +++G+C+ G+L +A ++  +M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  P++  YT  ++G C       A  +  T+++   +  A  ++ +++ + + GK 
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTA-PFNALINWVFKFGKT 782

Query: 426 SEACDVVREMVKKGF----FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
               +V+  ++   F     P  V  N++I  LC+EG ++ AK+   +  N      V+ 
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +TSL+ G+ + G   E   + D+      +PD + Y+ II+A  K G   +A  L+ +M 
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902

Query: 542 SKGLVP-----TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +K  V      ++ T R ++  + +VG +E   K++E M+  Q
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 199/435 (45%), Gaps = 53/435 (12%)

Query: 110 QICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR 169
           + C+  RS  D+ +                D   Y +++  L K      A+ + R M  
Sbjct: 575 EACSAYRSMVDQGIL--------------GDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620

Query: 170 RGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           +GI   P+ FSY  L+  +S+ G ++ A  +   M +  + PN++I N  +       ++
Sbjct: 621 KGIA--PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
            KA   L+ M + G+ PN +TY  +I GYC    + +A +L DEM LKG  PD   Y T+
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +   C+              +ND         +E A  +    ++ GC      + A++N
Sbjct: 739 VDGCCR--------------LND---------VERAITIFGT-NKKGCASSTAPFNALIN 774

Query: 348 GFCRVGELDQAKKMLQQM----YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
              + G+ +   ++L ++    +    KPN V+Y   ++ LC  G    A+E+ +  +  
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P  ITY+ +++G  + G+ +E   V  E +  G  P  +  +++I +  +EG    A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894

Query: 464 -----KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
                + F +  ++ GC +++    +L+ GF + G++E A  ++++M   +  PD+ T  
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954

Query: 519 TIID--ALSKNGRVE 531
            +I+   +S N RVE
Sbjct: 955 ELINESCISSNQRVE 969



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 144/629 (22%), Positives = 250/629 (39%), Gaps = 73/629 (11%)

Query: 101 NLLRSLKPRQICAVLRSQ--ADERVALQFFYWADRQWRYRHDPIVY-YMMLEILSKTKLC 157
           NL   + P  + +VLRS+   D    L FF W D Q         + ++ L++ +     
Sbjct: 55  NLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFE 114

Query: 158 QGAKRVLRLMARRG---------IECRPE---------AFSYLMVAYSRAGKLRNAMYVL 199
           +    V R++ R           + C  E          F  L   Y   G +  A++V 
Sbjct: 115 KALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVF 174

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S      + P L  C   +  L+  N+L       + M    +  +V TY+ LI  +C  
Sbjct: 175 SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRA 234

Query: 260 HRIK---------------------DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             ++                      A+KL + M  KG  P K +Y  ++  LCK KR+ 
Sbjct: 235 GNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL- 293

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                                 E+AK L+ +M  +G   D  TY+ +++G  +    D A
Sbjct: 294 ----------------------EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
           K ++ +M  HG       Y   +  +   G   +A+ + +        P A  Y+ ++ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
             RE  + +  +++ EM K+    +P     +++ +C  G +DGA   ++E +  GC  N
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           VV +T+LI+ F Q     +A+ +L +M      PD   Y ++I  LSK  R++EA   ++
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV-----IENLC 593
           +M+  GL P   TY   I  Y +        K +++M   ++C    N+V     I   C
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM---RECGVLPNKVLCTGLINEYC 568

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
             G + EA      ++      DA T  VL+           A ++   M  + + PD+ 
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERG 682
               +       G  ++A ++    VE G
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEG 657


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 163/656 (24%), Positives = 297/656 (45%), Gaps = 43/656 (6%)

Query: 74  RHPL-VREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRS-QADERVALQFFYWA 131
           R PL +  +CRL+ LR          +  L        + AVLR+ + +   +L FF + 
Sbjct: 5   RQPLAISRICRLVLLRRC------NAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFV 58

Query: 132 DRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLM-------------------ARRGI 172
            +Q  +R +   Y  ++ ILS+ ++    +  L  +                     R  
Sbjct: 59  SKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREF 118

Query: 173 ECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
              P  F  ++  Y   G  +NA+YV   M K    P+L  CN+ ++ LV   +   A  
Sbjct: 119 AFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHY 178

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GY- 290
             ++M   GI P+V   + ++  +C   ++ +A   + +M   G  P+ V+Y++++ GY 
Sbjct: 179 VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYV 238

Query: 291 -LCKEKRIKEVRDLMEKMVNDSNL---------FHDQGRIEEAKELVNQMS-QMGCIPDV 339
            L   +  K V   M +     N+         +  Q +++EA++++  M  +   +PD 
Sbjct: 239 SLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDE 298

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
             Y  +++G+CR G++D A ++L +M   G K N     + +NG C  G+  EA  +I  
Sbjct: 299 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 358

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             +    P++ +Y+ ++ G  REG  SEA ++  +M+++G  PT +  N L++ LCR G 
Sbjct: 359 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 418

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
            D A +     + +G A + V +++L+ G  +  + E A +L  D+         +T+ T
Sbjct: 419 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 478

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +I  L K G++ EA E+  KM   G  P  +TYRT+I  YC+   V    K+   M  + 
Sbjct: 479 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 538

Query: 580 KCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
              +   YN +I  L     L E   +L ++       +  T   L++ +  +G+   A+
Sbjct: 539 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 598

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQ 693
                M    L  ++ +C  +   L   G+ +EA+ LM + V+ G   P  E  L+
Sbjct: 599 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF-PDHECFLK 653



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 234/516 (45%), Gaps = 79/516 (15%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++   +T     A R+L  M R G++      + L+  Y + G++  A  V+
Sbjct: 297 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 356

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M    + P+    NT +         ++A    ++M   GI P VLTYN L+KG C +
Sbjct: 357 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 416

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMVNDSNLFH 315
               DA+++   M  +G +PD+V Y T++  L K +  +      +D++ +    S +  
Sbjct: 417 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 476

Query: 316 DQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK------- 360
           +         G++ EA+E+ ++M  +GC PD +TY  +++G+C+   + QA K       
Sbjct: 477 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 536

Query: 361 ----------------------------MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
                                       +L +M   G  PN V+Y A ++G C  G   +
Sbjct: 537 EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 596

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT--------- 443
           A        E   + N I  S ++ GL R G++ EA  ++++MV  GFFP          
Sbjct: 597 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 656

Query: 444 ---------------------PVEI--NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
                                P  I  N+ I  LC+ GK+D A++F      KG   +  
Sbjct: 657 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 716

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +LI G+   G+++EA  L D+M      P+ VTY  +I+ L K+  V+ A  L  K+
Sbjct: 717 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 776

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
             KGL P VVTY T+I  YC++G ++   KL +KM+
Sbjct: 777 HQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 812



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 248/541 (45%), Gaps = 43/541 (7%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQK-AAVAPNLLICNT 216
           + AK VL+ M+ +G+      ++ L+  Y +  K+  A  VL  MQ+ AA+ P+      
Sbjct: 244 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPD----ER 299

Query: 217 AIHVLVVG----NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
           A  VL+ G     K+  A+R L+ M   G+  N+   N LI GYC    I +A  +I  M
Sbjct: 300 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 359

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND----SNLFHDQ--------GRI 320
                 PD  SY T++   C+E    E  +L +KM+ +    + L ++         G  
Sbjct: 360 VDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 419

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           ++A ++ + M + G  PD V Y+ +++G  ++   + A  + + +   G   + +++   
Sbjct: 420 DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTM 479

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++GLC  GK +EA E+ +  ++   +P+ ITY  ++ G  +   + +A  V   M ++  
Sbjct: 480 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPI 539

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P+    N LI  L +  ++      + E   +G   N+V + +LI G+C++G L++A S
Sbjct: 540 SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 599

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
              +M       + +  +T++  L + GR++EA  LM KM+  G  P    +     RY 
Sbjct: 600 SYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYA 659

Query: 561 QVGRVEDLLKLLEKMLSKQKCRT-------AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
            + ++ D L         + C+T        YN  I  LC  G +++A +    +     
Sbjct: 660 AIQKIADSL--------DESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGF 711

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG--KSEEA 671
             D  T   L+  Y   G    A+++   M  R L+P++     V+   ++ G  KSE  
Sbjct: 712 VPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI-----VTYNALINGLCKSENV 766

Query: 672 D 672
           D
Sbjct: 767 D 767



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 209/460 (45%), Gaps = 46/460 (10%)

Query: 135 WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
           W  + D   Y  +L+   +      A  +   M + GIE     ++ L+    R G   +
Sbjct: 362 WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDD 421

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +  +M K  VAP+ +  +T +  L        A    + +   G T + +T+N +I 
Sbjct: 422 ALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 481

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEK----- 306
           G C + ++ +A ++ D+M   GCSPD ++Y T++   CK   + +   V+  ME+     
Sbjct: 482 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP 541

Query: 307 ---MVND--SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
              M N   S LF  + R+ E  +L+ +M   G  P++VTY A+++G+C+ G LD+A   
Sbjct: 542 SIEMYNSLISGLFKSR-RLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 600

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR--------------------------- 394
             +M  +G   N +  +  ++GL   G+  EA                            
Sbjct: 601 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 660

Query: 395 -----EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
                + ++ S + +  PN I Y++ + GL + GK+ +A      +  KGF P       
Sbjct: 661 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 720

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI      G +D A +   E L +G   N+V + +LI G C+  +++ A  L   ++   
Sbjct: 721 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 780

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
             P+ VTY T+ID   K G ++ A +L  KM+ +G+ P++
Sbjct: 781 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820


>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
          Length = 772

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 165/695 (23%), Positives = 306/695 (44%), Gaps = 113/695 (16%)

Query: 81  VCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHD 140
           +CR++  R AW+ +L+  +R+L+       +  VL    +   ALQFF W +R   +RHD
Sbjct: 93  ICRMMANR-AWTTRLQNSIRSLVPQFDHSLVWNVLHGSRNSDHALQFFRWVERAGLFRHD 151

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
              +  ++EIL +      A+ +L  M ++G+E   + F  L+ +Y +AG ++ ++ V  
Sbjct: 152 RDTHLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQ 211

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M++  V   +   +    V++   +   A R+   M   G+ P   TYN +I G+    
Sbjct: 212 KMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSL 271

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           +++ A +  +EM  +  SPD V+Y T++ GY     RIK                    +
Sbjct: 272 KVETANRFFEEMKERRISPDVVTYNTMINGYY----RIK--------------------K 307

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +EEA++   +M      P V++YT ++ G+  VG +D   ++ ++M   G KPN V+Y+ 
Sbjct: 308 MEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYST 367

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR---REGKLSEACDVVREMV 436
            L GLC   K LEA+ ++    E +  P     S+ M  +    + G+L  A DV++ M+
Sbjct: 368 LLPGLCDGEKMLEAQNVVKEMVERYIAPK--DNSIFMRLITCQCKAGQLDAAADVLKAMI 425

Query: 437 -------------------KKGFFPTPVEI------------------------NLLIQS 453
                              K G +   V++                        NL+I+ 
Sbjct: 426 RLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEY 485

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG------------------------- 488
           LC  G+   A+   ++ + KG   + + F +LIRG                         
Sbjct: 486 LCNSGQTSKAETLFRQLMKKGVQ-DPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPRE 544

Query: 489 ----------FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
                     F +KG+  +A + LD M      PD+  + +++++L ++GR++ A+ +M 
Sbjct: 545 ADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMN 604

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYL 598
            M+ KG+   +     ++      G VE+ L  ++ +L    C   ++ ++  LC+ G  
Sbjct: 605 NMVEKGVKENMDLVAKILEALLLRGHVEEALGRID-LLMNNGCEPDFDGLLSVLCAKGKT 663

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
             A K+L   L        S+   ++++ L  G  L AY + C++  +    D   CK +
Sbjct: 664 IAALKLLDFGLERDYNISFSSYENVLDALLTAGKTLNAYSILCKIMQKGGATDWSSCKDL 723

Query: 659 SERLILEGKSEEADTL--MLRFVERGHIQPKSEEH 691
              L  EG +++AD L  M++  E+ H   K ++ 
Sbjct: 724 IRSLNEEGNTKQADILSRMIKGEEKVHGSKKGKKQ 758


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/524 (24%), Positives = 262/524 (50%), Gaps = 15/524 (2%)

Query: 177 EAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
           + F+Y  L+   S+ G+++ A+++L  M+K++V PNL++ +  I  L     ++ AL   
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
            ++   GI  + +TYN LI G C + R ++  +L+ +M  +   PD  ++  ++  LCKE
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278

Query: 295 KRIKEVRDLMEKM---------VNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
            RI E + ++  M         V  + L   +  +  + EA+EL N+M + G  PDV+ Y
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             +++G+C+   +D+A  + +++ +    P   SY + ++GLC++G+    +++++    
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               P+ +TY++++  L +EG++ EA  V+  M+KKG  P  V  N ++   C    ++ 
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           AK      +  G   +++N+  LI G+C+   ++EA+ L  +M      PD  +Y ++ID
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
            L   GR+    EL+ +M   G  P V+TY  ++  +C+    +  + L  +++      
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPD 578

Query: 583 TAYNQ-VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              N  +++NLC    L+ A   L  +L      +  T  +L+ +    G    A  +  
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ 685
           +M + +  PD    + +   L+   ++++A+ L    + RG + 
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVN 682



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 225/498 (45%), Gaps = 60/498 (12%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           +  +GI      F+ L+  Y        A  +L+ + K+   PNL+  NT I+   +   
Sbjct: 81  LQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGM 140

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + KAL F + +   G   +  TY  LI G     +IK A+ L+ EM      P+ V Y  
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LCK+                       G + +A  L +Q+ + G + D VTY +++
Sbjct: 201 LIDGLCKD-----------------------GFVSDALGLCSQIGERGILLDAVTYNSLI 237

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C VG   +  ++L +M      P+  ++   ++ LC  G+ LEA+ ++    +    
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEK 297

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ +TY+ +M G      + EA ++   MVK+G  P  +  N+LI   C+   +D A   
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL 357

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +E  NK     + ++ SLI G C  G +     LLD+M+   + PD VTY  +IDAL K
Sbjct: 358 FKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC---QVGRVEDLLKLLEK--------- 574
            GR+ EA  +++ M+ KG+ P +VTY  ++  YC    V   +D+   + K         
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILN 477

Query: 575 --MLSKQKCRT-----------------------AYNQVIENLCSFGYLEEAGKILGKVL 609
             +L    C+T                       +YN +I+ LC+ G +    ++L ++ 
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537

Query: 610 RTASKADASTCHVLVESY 627
            +    D  T ++L++++
Sbjct: 538 DSGQSPDVITYNILLDAF 555



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 210/419 (50%), Gaps = 13/419 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   + ++++ L K      A+ VL +M++RG +     ++ LM  Y     +  A  + 
Sbjct: 264 DDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELF 323

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M K  + P++L  N  I        + +A+   + +    + P + +YN LI G C+ 
Sbjct: 324 NRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNS 383

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            RI    KL+DEM      PD V+Y  ++  LCKE RI E   ++  M+           
Sbjct: 384 GRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTY 443

Query: 312 NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N   D    +  +  AK++ N+M + G  PD++ Y  ++NG+C+   +D+A  + ++M H
Sbjct: 444 NAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRH 503

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
               P+  SY + ++GLC+ G+    +E+++   +   +P+ ITY++++    +     +
Sbjct: 504 KNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDK 563

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  + R++V+ G +P     + ++ +LC+  K+  A+  ++  L  GC+ NV  +T LI 
Sbjct: 564 AISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILIN 622

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
             C+ G   EA+ LL  M    + PD +T+  II  L +    ++A +L  +M+++GLV
Sbjct: 623 ALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 130/511 (25%), Positives = 228/511 (44%), Gaps = 28/511 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           ++Y  +++ L K      A  +   +  RGI      ++ L+      G+ +    +L+ 
Sbjct: 196 VMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTK 255

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  V P+    N  I  L    ++ +A   L  M   G  P+++TYN L++GYC    
Sbjct: 256 MVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSREN 315

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A +L + M  +G  PD ++Y  ++   CK K + E   L +++ N            
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN------------ 363

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
             K LV         P + +Y ++++G C  G +   KK+L +M+     P+ V+Y   +
Sbjct: 364 --KNLV---------PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           + LC  G+ LEA  ++    ++   PN +TY+ +M G      ++ A D+   MVK G  
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  +  N+LI   C+   +D A    +E  +K    ++ ++ SLI G C  G +     L
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC- 560
           LD+M    + PD +TY  ++DA  K    ++A  L  + + +G+ P   T   ++   C 
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISL-FRQIVEGIWPDFYTNHAIVDNLCK 591

Query: 561 --QVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
             ++   ED LK L         +T Y  +I  LC  G   EA  +L K+       DA 
Sbjct: 592 GEKLKMAEDALKHLLMHGCSPNVQT-YTILINALCKDGSFGEAMLLLSKMEDNDRPPDAI 650

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           T  +++   L +     A K+   M  R L+
Sbjct: 651 TFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 232/500 (46%), Gaps = 32/500 (6%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R   + +A+   + M +    P   + +  +  +V       A+    ++Q  GI+P++ 
Sbjct: 32  RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           T+  LI  Y        A  L+  +   G  P+ V++ T++   C    I +  D  + +
Sbjct: 92  TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +    LF                       D  TY  ++NG  + G++  A  +LQ+M  
Sbjct: 152 LAQGYLF-----------------------DQFTYGTLINGLSKNGQIKAALHLLQEMEK 188

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
              +PN V Y+A ++GLC +G   +A  + +   E     +A+TY+ ++ G    G+  E
Sbjct: 189 SSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQE 248

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
              ++ +MV++   P     N+LI +LC+EG++  A+  +     +G   ++V + +L+ 
Sbjct: 249 VTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALME 308

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G+C + ++ EA  L + M     +PD + Y  +ID   K   V+EA  L  ++ +K LVP
Sbjct: 309 GYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVP 368

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKIL 605
           T+ +Y ++I   C  GR+  + KLL++M    +      YN +I+ LC  G + EA  +L
Sbjct: 369 TIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVL 428

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
             +++   K +  T + +++ Y  +    +A  +  RM    L PD+     ++  +++ 
Sbjct: 429 VMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDI-----LNYNVLIN 483

Query: 666 G--KSEEADTLMLRFVERGH 683
           G  K+E  D  ++ F E  H
Sbjct: 484 GYCKTEMVDEAIVLFKEMRH 503



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 159/335 (47%), Gaps = 9/335 (2%)

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           CR   +D A     +M      P T  +   L  +   G    A  +    + +  +P+ 
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            T++++++    +   + A  ++  ++K G+ P  V  N +I   C  G +  A  F Q 
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            L +G   +   + +LI G  + G ++ AL LL +M      P+ V Y+ +ID L K+G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQ 587
           V +A  L  ++  +G++   VTY ++I   C VGR +++ +LL KM+ +      Y  N 
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I+ LC  G + EA  +L  + +   K D  T + L+E Y ++     A ++  RM  R 
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 648 LIPDLKLCKKVSERLILEG--KSEEADTLMLRFVE 680
           L PD+     ++  ++++G  K++  D  M+ F E
Sbjct: 331 LEPDV-----LNYNVLIDGYCKTKMVDEAMVLFKE 360


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 248/517 (47%), Gaps = 32/517 (6%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           P +Y   + ++SK  + + AK +   M   G+  + +A++ L+  Y R   +R    +L 
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M+K  +  +     T +  +     L  A   ++ M  +G  PNV+ Y  LIK +    
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
           R  DA++++ EM  +G +PD   Y +++  L K KR+ E R  + +MV +          
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN---------- 516

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
                        G  P+  TY A ++G+    E   A K +++M   G  PN V  T  
Sbjct: 517 -------------GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           +N  C  GK +EA     +  ++    +A TY+V+M+GL +  K+ +A ++ REM  KG 
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P      +LI    + G M  A     E + +G   NV+ +  L+ GFC+ G++E+A  
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           LLD+M +    P+ VTY TIID   K+G + EA  L  +M  KGLVP    Y T++   C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743

Query: 561 QVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTA----S 613
           ++  VE  + +     +K+ C ++   +N +I  +  FG  E   ++L +++  +     
Sbjct: 744 RLNDVERAITIFGT--NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
           K +  T +++++    +G    A ++  +M N NL+P
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 258/560 (46%), Gaps = 29/560 (5%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYV 198
           P  Y  +++ +  +    GA  +++ M   G  CRP    Y  L+  + +  +  +AM V
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASG--CRPNVVIYTTLIKTFLQNSRFGDAMRV 474

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L  M++  +AP++   N+ I  L    ++ +A  FL  M   G+ PN  TY   I GY +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
                 A K + EM   G  P+KV    ++   CK+ ++ E       MV+         
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                N      ++++A+E+  +M   G  PDV +Y  ++NGF ++G + +A  +  +M 
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  PN + Y   L G C +G+  +A+E+++    +   PNA+TY  ++ G  + G L+
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA  +  EM  KG  P       L+   CR   ++ A         KGCA +   F +LI
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALI 773

Query: 487 RGFCQKGDLE---EALS-LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
               + G  E   E L+ L+D  +     P+ VTY  +ID L K G +E A EL  +M +
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
             L+PTV+TY ++++ Y ++GR  ++  + ++ ++   +     Y+ +I      G   +
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893

Query: 601 AGKILGKVLRTASKADA-----STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD-LKL 654
           A  ++ ++    +  D      STC  L+  +   G   +A KV   M     IPD   +
Sbjct: 894 ALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATV 953

Query: 655 CKKVSERLILEGKSEEADTL 674
            + ++E  I   +  EAD +
Sbjct: 954 IELINESCISSNQRVEADAV 973



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 222/463 (47%), Gaps = 26/463 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  ++  LSK K    A+  L  M   G+  +P AF+Y   +  Y  A +  +A  
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL--KPNAFTYGAFISGYIEASEFASADK 543

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            +  M++  V PN ++C   I+      K+ +A      M   GI  +  TY  L+ G  
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              ++ DA ++  EM  KG +PD  SY  ++    K   +++   + ++MV +       
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663

Query: 312 --NL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             N+    F   G IE+AKEL+++MS  G  P+ VTY  +++G+C+ G+L +A ++  +M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  P++  YT  ++G C       A  +  T+++   +  A  ++ +++ + + GK 
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTA-PFNALINWVFKFGKT 782

Query: 426 SEACDVVREMVKKGF----FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
               +V+  ++   F     P  V  N++I  LC+EG ++ AK+   +  N      V+ 
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +TSL+ G+ + G   E   + D+      +PD + Y+ II+A  K G   +A  L+ +M 
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902

Query: 542 SKGLVP-----TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +K  V      ++ T R ++  + +VG +E   K++E M+  Q
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 199/435 (45%), Gaps = 53/435 (12%)

Query: 110 QICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR 169
           + C+  RS  D+ +                D   Y +++  L K      A+ + R M  
Sbjct: 575 EACSAYRSMVDQGIL--------------GDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620

Query: 170 RGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           +GI   P+ FSY  L+  +S+ G ++ A  +   M +  + PN++I N  +       ++
Sbjct: 621 KGIA--PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
            KA   L+ M + G+ PN +TY  +I GYC    + +A +L DEM LKG  PD   Y T+
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +   C+              +ND         +E A  +    ++ GC      + A++N
Sbjct: 739 VDGCCR--------------LND---------VERAITIFGT-NKKGCASSTAPFNALIN 774

Query: 348 GFCRVGELDQAKKMLQQM----YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
              + G+ +   ++L ++    +    KPN V+Y   ++ LC  G    A+E+ +  +  
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P  ITY+ +++G  + G+ +E   V  E +  G  P  +  +++I +  +EG    A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894

Query: 464 -----KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
                + F +  ++ GC +++    +L+ GF + G++E A  ++++M   +  PD+ T  
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954

Query: 519 TIID--ALSKNGRVE 531
            +I+   +S N RVE
Sbjct: 955 ELINESCISSNQRVE 969



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 143/629 (22%), Positives = 249/629 (39%), Gaps = 73/629 (11%)

Query: 101 NLLRSLKPRQICAVLRSQ--ADERVALQFFYWADRQWRYRHDPIVY-YMMLEILSKTKLC 157
           NL   + P  + +VLRS+   D    L FF W D Q         + ++ L++ +     
Sbjct: 55  NLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFE 114

Query: 158 QGAKRVLRLMARRG---------IECRPE---------AFSYLMVAYSRAGKLRNAMYVL 199
           +    V R++ R           + C  E          F  L   Y     +  A++V 
Sbjct: 115 KALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKEYIEEAVFVF 174

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S      + P L  C   +  L+  N+L       + M    +  +V TY+ LI  +C  
Sbjct: 175 SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRA 234

Query: 260 HRIK---------------------DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             ++                      A+KL + M  KG  P K +Y  ++  LCK KR+ 
Sbjct: 235 GNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL- 293

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                                 E+AK L+ +M  +G   D  TY+ +++G  +    D A
Sbjct: 294 ----------------------EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
           K ++ +M  HG       Y   +  +   G   +A+ + +        P A  Y+ ++ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
             RE  + +  +++ EM K+    +P     +++ +C  G +DGA   ++E +  GC  N
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           VV +T+LI+ F Q     +A+ +L +M      PD   Y ++I  LSK  R++EA   ++
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV-----IENLC 593
           +M+  GL P   TY   I  Y +        K +++M   ++C    N+V     I   C
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM---RECGVLPNKVLCTGLINEYC 568

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
             G + EA      ++      DA T  VL+           A ++   M  + + PD+ 
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERG 682
               +       G  ++A ++    VE G
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEG 657


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 259/560 (46%), Gaps = 29/560 (5%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYV 198
           P  Y  +++ +  +    GA  +++ M   G  CRP    Y  L+  + +  +  +AM V
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASG--CRPNVVIYTTLIKTFLQNSRFGDAMRV 474

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L  M++  +AP++   N+ I  L    ++ +A  FL  M   G+ PN  TY   I GY +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
                 A K + EM   G  P+KV    ++   CK++++ E       MV+         
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKT 594

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                N      ++++A+E+  +M   G  PDV +Y  ++NGF ++G + +A  +  +M 
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  PN + Y   L G C +G+  +A+E+++    +   PNA+TY  ++ G  + G L+
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA  +  EM  KG  P       L+   CR   ++ A         KGCA +   F +LI
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALI 773

Query: 487 RGFCQKGDLE---EALS-LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
               + G  E   E L+ L+D  +     P+ VTY  +ID L K G +E A EL  +M +
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
             L+PTV+TY ++++ Y ++GR  ++  + ++ ++   +     Y+ +I      G   +
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893

Query: 601 AGKILGKVLRTASKADA-----STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD-LKL 654
           A  ++ ++    +  D      STC  L+  +   G   +A KV   M     IPD   +
Sbjct: 894 ALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATV 953

Query: 655 CKKVSERLILEGKSEEADTL 674
            + ++E  I   +  EAD +
Sbjct: 954 IELINESCISSNQRVEADAV 973



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 247/517 (47%), Gaps = 32/517 (6%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           P +Y   + ++SK  + + AK +   M   G+  + +A++ L+  Y R   +R    +L 
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M+K  +  +     T +  +     L  A   ++ M  +G  PNV+ Y  LIK +    
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
           R  DA++++ EM  +G +PD   Y +++  L K KR+ E R  + +MV +          
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN---------- 516

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
                        G  P+  TY A ++G+    E   A K +++M   G  PN V  T  
Sbjct: 517 -------------GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           +N  C   K +EA     +  ++    +A TY+V+M+GL +  K+ +A ++ REM  KG 
Sbjct: 564 INEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P      +LI    + G M  A     E + +G   NV+ +  L+ GFC+ G++E+A  
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           LLD+M +    P+ VTY TIID   K+G + EA  L  +M  KGLVP    Y T++   C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743

Query: 561 QVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTA----S 613
           ++  VE  + +     +K+ C ++   +N +I  +  FG  E   ++L +++  +     
Sbjct: 744 RLNDVERAITIFGT--NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
           K +  T +++++    +G    A ++  +M N NL+P
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 222/463 (47%), Gaps = 26/463 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  ++  LSK K    A+  L  M   G+  +P AF+Y   +  Y  A +  +A  
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL--KPNAFTYGAFISGYIEASEFASADK 543

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            +  M++  V PN ++C   I+      K+ +A      M   GI  +  TY  L+ G  
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              ++ DA ++  EM  KG +PD  SY  ++    K   +++   + ++MV +       
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663

Query: 312 --NL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             N+    F   G IE+AKEL+++MS  G  P+ VTY  +++G+C+ G+L +A ++  +M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  P++  YT  ++G C       A  +  T+++   +  A  ++ +++ + + GK 
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTA-PFNALINWVFKFGKT 782

Query: 426 SEACDVVREMVKKGF----FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
               +V+  ++   F     P  V  N++I  LC+EG ++ AK+   +  N      V+ 
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +TSL+ G+ + G   E   + D+      +PD + Y+ II+A  K G   +A  L+ +M 
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902

Query: 542 SKGLVP-----TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +K  V      ++ T R ++  + +VG +E   K++E M+  Q
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 199/435 (45%), Gaps = 53/435 (12%)

Query: 110 QICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR 169
           + C+  RS  D+ +                D   Y +++  L K      A+ + R M  
Sbjct: 575 EACSAYRSMVDQGIL--------------GDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620

Query: 170 RGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           +GI   P+ FSY  L+  +S+ G ++ A  +   M +  + PN++I N  +       ++
Sbjct: 621 KGIA--PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
            KA   L+ M + G+ PN +TY  +I GYC    + +A +L DEM LKG  PD   Y T+
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +   C+              +ND         +E A  +    ++ GC      + A++N
Sbjct: 739 VDGCCR--------------LND---------VERAITIFGT-NKKGCASSTAPFNALIN 774

Query: 348 GFCRVGELDQAKKMLQQM----YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
              + G+ +   ++L ++    +    KPN V+Y   ++ LC  G    A+E+ +  +  
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P  ITY+ +++G  + G+ +E   V  E +  G  P  +  +++I +  +EG    A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894

Query: 464 -----KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
                + F +  ++ GC +++    +L+ GF + G++E A  ++++M   +  PD+ T  
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954

Query: 519 TIID--ALSKNGRVE 531
            +I+   +S N RVE
Sbjct: 955 ELINESCISSNQRVE 969



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 143/629 (22%), Positives = 249/629 (39%), Gaps = 73/629 (11%)

Query: 101 NLLRSLKPRQICAVLRSQ--ADERVALQFFYWADRQWRYRHDPIVY-YMMLEILSKTKLC 157
           NL   + P  + +VLRS+   D    L FF W D Q         + ++ L++ +     
Sbjct: 55  NLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFE 114

Query: 158 QGAKRVLRLMARRG---------IECRPE---------AFSYLMVAYSRAGKLRNAMYVL 199
           +    V R++ R           + C  E          F  L   Y   G +  A++V 
Sbjct: 115 KALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVF 174

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S      + P L  C   +  L+  N+L       + M    +  +V TY+ LI  +C  
Sbjct: 175 SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRA 234

Query: 260 HRIK---------------------DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             ++                      A+KL + M  KG  P K +Y  ++  LCK KR+ 
Sbjct: 235 GNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL- 293

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                                 E+AK L+ +M  +G   D  TY+ +++G  +    D A
Sbjct: 294 ----------------------EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
           K ++ +M  HG       Y   +  +   G   +A+ + +        P A  Y+ ++ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
             RE  + +  +++ EM K+    +P     +++ +C  G +DGA   ++E +  GC  N
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           VV +T+LI+ F Q     +A+ +L +M      PD   Y ++I  LSK  R++EA   ++
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV-----IENLC 593
           +M+  GL P   TY   I  Y +        K +++M   ++C    N+V     I   C
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM---RECGVLPNKVLCTGLINEYC 568

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
               + EA      ++      DA T  VL+           A ++   M  + + PD+ 
Sbjct: 569 KKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERG 682
               +       G  ++A ++    VE G
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEG 657


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 148/636 (23%), Positives = 298/636 (46%), Gaps = 53/636 (8%)

Query: 102 LLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAK 161
           L + + P  +  +L+++ +   AL  F  A +   Y H P V++ +L  L   KL     
Sbjct: 4   LPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVG 63

Query: 162 RVLRLM-----------ARRGIE-----------------------CRP--EAFSYLMVA 185
           R++ LM           A   I+                       C P   +F+ ++ A
Sbjct: 64  RIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNA 123

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
           +  + + R A    +  Q A ++PNL   N  I +     +  K    L  M   G+ P+
Sbjct: 124 FIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPD 183

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           +L+Y  LI        + DA++L DEM ++G +PD + Y  ++    ++    +  ++ +
Sbjct: 184 ILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWK 243

Query: 306 KMVNDSNLFHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           +++ +S+++                G+++E+ E+ N+M +    PD+ T++++++G  + 
Sbjct: 244 RLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKA 303

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
           G  + A+K+ Q+M   G  P+  +Y A L+GL   GK  +  E+ N   +     N ++Y
Sbjct: 304 GNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSY 362

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           ++++ GL    K+ +A    + + ++G         LLI  LC+ G ++ A + ++E  N
Sbjct: 363 NMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAEN 422

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +G  ++   ++S++ G C+KG LE+A+ L+  M   ++  ++  + ++I+   +  ++EE
Sbjct: 423 EGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEE 482

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIE 590
           A  ++ +M SK   PTVV+Y T+I+  C+  R  D    L++ML +  +     Y+ +I+
Sbjct: 483 AISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLID 542

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC    ++ A  +  + +    K D    ++++          +A ++  +M   N +P
Sbjct: 543 GLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVP 602

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           DL     + E L   G   EA  +  R +E G +QP
Sbjct: 603 DLVTHNTIMEGLYKAGDCVEALKIWDRILEAG-LQP 637



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 134/549 (24%), Positives = 252/549 (45%), Gaps = 56/549 (10%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
            Y ++++I  K +  +  K +L  M   G+   P+  SY  L+ A +++G L +A+ +  
Sbjct: 151 TYNILIKISCKKRQFEKGKGLLTWMFENGL--NPDILSYGTLINALAKSGNLLDAVELFD 208

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL-AGITPNVLTYNCLIKGYCDL 259
            M    V P+++  N  I   +      KA    +R+   + + P+V TYN +I G C L
Sbjct: 209 EMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKL 268

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND--------- 310
            ++ +++++ + M     SPD  ++ +++  L K         + ++M+           
Sbjct: 269 GKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTY 328

Query: 311 ----SNLFHDQGRIEEAKELVNQMSQMGCI------------------------------ 336
               S LF   G++ +  EL N MS+  C                               
Sbjct: 329 NAMLSGLFR-TGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHE 387

Query: 337 ----PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
                D  TY  ++NG C+ G L++A ++L++  + G   +T +Y++ ++GLC  G   +
Sbjct: 388 RGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQ 447

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A E+I+  ++     N+  ++ +++G  R  KL EA  V+REM  K   PT V  N +I 
Sbjct: 448 AVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIIN 507

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+  +   A   ++E L +G   +++ ++ LI G C+   ++ AL+L       +  P
Sbjct: 508 GLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKP 567

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D   +  II  L    +V+ A E+  +M     VP +VT+ T++    + G   + LK+ 
Sbjct: 568 DLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIW 627

Query: 573 EKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           +++L    Q    +YN   + LCS   + +A + L   L      +A T +VLV + ++ 
Sbjct: 628 DRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDD 687

Query: 631 GIPLLAYKV 639
             PL+ Y +
Sbjct: 688 K-PLMEYAL 695



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 191/417 (45%), Gaps = 24/417 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   +  M+  LSK      A++V + M   G+      ++ ++    R GKL     + 
Sbjct: 289 DLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELW 348

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           ++M K     N++  N  I  L+   K+ +A+ + + +   G+  +  TY  LI G C  
Sbjct: 349 NVMSKNNCC-NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKN 407

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             +  A+++++E   +G   D  +Y +++  LCK                       +G 
Sbjct: 408 GYLNKALRILEEAENEGADLDTFAYSSMVHGLCK-----------------------KGM 444

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +E+A EL++QM +     +   + +++NG+ R  +L++A  +L++M    C P  VSY  
Sbjct: 445 LEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNT 504

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +NGLC   +  +A   +    EE   P+ ITYS+++ GL R  K+  A ++  + + K 
Sbjct: 505 IINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKR 564

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     N++I  LC   K+D A +   +     C  ++V   +++ G  + GD  EAL
Sbjct: 565 LKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEAL 624

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            + D +      PD ++Y      L    RV +A E +   L +G++P   T+  ++
Sbjct: 625 KIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 160/356 (44%), Gaps = 23/356 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y M+++ L   K  + A    +L+  RG++     +  L+    + G L  A+ +L  
Sbjct: 360 VSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEE 419

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
            +      +    ++ +H L     L +A+  + +M+      N   +N LI GY    +
Sbjct: 420 AENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFK 479

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +++AI ++ EM  K C+P  VSY T++  LCK +R  +    +++M+ +           
Sbjct: 480 LEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEE----------- 528

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
                       G  PD++TY+ +++G CR  ++D A  +  Q  +   KP+   +   +
Sbjct: 529 ------------GLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIII 576

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +GLC   K   A E+     +    P+ +T++ +M GL + G   EA  +   +++ G  
Sbjct: 577 HGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQ 636

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           P  +  N+  + LC   ++  A +F+ + L++G   N   +  L+R       L E
Sbjct: 637 PDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLME 692


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 147/551 (26%), Positives = 265/551 (48%), Gaps = 16/551 (2%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           ++E    T+    A  VL L+ +RG       F+ L+  + ++G    AM +  MM++  
Sbjct: 100 LIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNC 159

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           + P+ +  NT I+ L  G +L +A    + M+     PN +T++ LI G+C    +++  
Sbjct: 160 LIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGF 219

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLF 314
            L++EM   G   D   Y  ++   C +  I+  ++L  +M+  +            N  
Sbjct: 220 GLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNAL 279

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             + + +EA ++++ M+     PDVV YT + +G  + G    A K+L  M   G +PN 
Sbjct: 280 CKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNN 339

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y A +NGLC  G+  +A  ++ T  ++   P+ +TYS ++ GL   GK+ EA D++  
Sbjct: 340 VTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNL 399

Query: 435 MVKKGFF--PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           ++ K F   P     NL+IQ LC++ ++  AK+     + +G   N+V +  LI G+   
Sbjct: 400 LMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSA 459

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G L +AL L  D       P+  TYT +I+ L K   +  A  L  K  + G  PTV  Y
Sbjct: 460 GKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEY 519

Query: 553 RTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
            T++   C+   VE    L ++M   +      ++N +I+     G +E A ++L ++L 
Sbjct: 520 NTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLN 579

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                D  T  +L+  +L  G    A  +  RM +   +PD  L   + +   L+GK+E+
Sbjct: 580 MNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEK 639

Query: 671 ADTLMLRFVER 681
             +++ +  ++
Sbjct: 640 VVSMLQQMADK 650



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 238/502 (47%), Gaps = 23/502 (4%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           +A    + + V S M   +V P     +  I   V   K + A   L  +   G   NV 
Sbjct: 71  KAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVY 130

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            +N L+KG+C       A+ L   M      PD VSY TV+  LCK KR+ E ++L ++M
Sbjct: 131 NFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEM 190

Query: 308 ---------VNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                    V  S L   F   G +EE   L+ +M +MG   DV  Y+A+++GFC  G++
Sbjct: 191 KGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDI 250

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           ++ K++  +M      PN V+Y+  +N LC   K  EA +M++T       P+ + Y+V+
Sbjct: 251 ERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVL 310

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
             GL + G+ S+A  V+  MVK+G  P  V  N +I  LC+EG++D A   ++    KG 
Sbjct: 311 ADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGK 370

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK---DPDTVTYTTIIDALSKNGRVEE 532
             +VV +++L++G C  G ++EA+ LL ++ + K+    PD   +  +I  L K  R+  
Sbjct: 371 KPDVVTYSTLVKGLCGVGKIDEAVDLL-NLLMSKEFHIKPDVFAFNLVIQELCKQRRLRH 429

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIE 590
           A  +   M+ +G    +VTY  +I  Y   G++   L+L +  +       A  Y  +I 
Sbjct: 430 AKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLIN 489

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC    L  A  +  K   + ++   S  + L+ S   +     A  +   M N N  P
Sbjct: 490 GLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDP 549

Query: 651 DLKLCKKVSERLILEGKSEEAD 672
           D+     VS  +I++G  +  D
Sbjct: 550 DV-----VSFNIIIDGTLKAGD 566



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 151/571 (26%), Positives = 262/571 (45%), Gaps = 61/571 (10%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
             D   A+  F    R      D + Y  ++  L K K    AK + + M  +G EC+P 
Sbjct: 142 SGDSHKAMDLFCMMKRNCLIP-DCVSYNTVINGLCKGKRLVEAKELFKEM--KGGECKPN 198

Query: 178 A--FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
           +  FS L+  + + G +     +L  M+K  +  ++ + +  I        + +      
Sbjct: 199 SVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFN 258

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS--PDKVSYYTVMGYLCK 293
            M    +TPNV+TY+CL+   C   + K+A +++D M   GC   PD V+Y  +   L K
Sbjct: 259 EMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM--TGCKVRPDVVAYTVLADGLSK 316

Query: 294 EKRIKEVRDLMEKMVN----DSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVT 341
             R  +   +++ MV      +N+ ++        +GR+++A  ++  M++ G  PDVVT
Sbjct: 317 NGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVT 376

Query: 342 YTAVVNGFCRVGELDQ-------------------------------------AKKMLQQ 364
           Y+ +V G C VG++D+                                     AK++   
Sbjct: 377 YSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYT 436

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G   N V+Y   ++G    GK  +A E+   + +   +PNA TY+V+++GL +   
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQM 496

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           LS A  +  +    G  PT  E N L+ SLCRE  ++ A+   QE  N     +VV+F  
Sbjct: 497 LSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNI 556

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +I G  + GD+E A  LL +M      PD +T++ +I+   K G+++EA  L  +M+S G
Sbjct: 557 IIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCG 616

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAG 602
            VP  V + +++  Y   G+ E ++ +L++M  K     +   + ++  LC+     +  
Sbjct: 617 HVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIE 676

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIP 633
           KIL K  +  S   +  C+ L+   LNK  P
Sbjct: 677 KILPKFSQHTSVGASIKCNELLMK-LNKVHP 706



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 157/355 (44%), Gaps = 5/355 (1%)

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           IP   +   +++   +    D    +  +M      P   S +A +    +  K   A  
Sbjct: 56  IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           ++    +  +  N   +++++ G  + G   +A D+   M +    P  V  N +I  LC
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           +  ++  AK+  +E     C  N V F++LI GFC+ GD+EE   LL++M     + D  
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            Y+ +I      G +E   EL  +ML K + P VVTY  +++  C+  + ++  ++L+ M
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 576 LSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
            +  K R    AY  + + L   G   +A K+L  +++   + +  T + ++     +G 
Sbjct: 296 -TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGR 354

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA-DTLMLRFVERGHIQP 686
              A  +   M  +   PD+     + + L   GK +EA D L L   +  HI+P
Sbjct: 355 VDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKP 409


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 261/521 (50%), Gaps = 15/521 (2%)

Query: 177 EAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
           + F+Y  L+   S+ G+++ A+++L  M+K++V PNL++ +  I  L     ++ AL   
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
            ++   GI  + +TYN LI G C + R ++  +L+ +M  +   PD  ++  ++  LCKE
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278

Query: 295 KRIKEVRDLMEKM---------VNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
            RI E + ++  M         V  + L   +  +  + EA+EL N+M + G  PDV+ Y
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             +++G+C+   +D+A  + +++ +    P   SY + ++GLC++G+    +++++    
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               P+ +TY++++  L +EG++ EA  V+  M+KKG  P  V  N ++   C    ++ 
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           AK      +  G   +++N+  LI G+C+   ++EA+ L  +M      PD  +Y ++ID
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
            L   GR+    EL+ +M   G  P V+TY  ++  +C+    +  + L  +++      
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPD 578

Query: 583 TAYNQ-VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              N  +++NLC    L+ A   L  +L      +  T  +L+ +    G    A  +  
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +M + +  PD    + +   L+   ++++A+ L    + RG
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 225/498 (45%), Gaps = 60/498 (12%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           +  +GI      F+ L+  Y        A  +L+ + K+   PNL+  NT I+   +   
Sbjct: 81  LQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGM 140

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + KAL F + +   G   +  TY  LI G     +IK A+ L+ EM      P+ V Y  
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LCK+                       G + +A  L +Q+ + G + D VTY +++
Sbjct: 201 LIDGLCKD-----------------------GFVSDALGLCSQIGERGILLDAVTYNSLI 237

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C VG   +  ++L +M      P+  ++   ++ LC  G+ LEA+ ++    +    
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEK 297

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ +TY+ +M G      + EA ++   MVK+G  P  +  N+LI   C+   +D A   
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL 357

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +E  NK     + ++ SLI G C  G +     LLD+M+   + PD VTY  +IDAL K
Sbjct: 358 FKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC---QVGRVEDLLKLLEK--------- 574
            GR+ EA  +++ M+ KG+ P +VTY  ++  YC    V   +D+   + K         
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILN 477

Query: 575 --MLSKQKCRT-----------------------AYNQVIENLCSFGYLEEAGKILGKVL 609
             +L    C+T                       +YN +I+ LC+ G +    ++L ++ 
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537

Query: 610 RTASKADASTCHVLVESY 627
            +    D  T ++L++++
Sbjct: 538 DSGQSPDVITYNILLDAF 555



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 213/419 (50%), Gaps = 13/419 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   + ++++ L K      A+ VL +M++RG +     ++ LM  Y     +  A  + 
Sbjct: 264 DDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELF 323

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M K  + P++L  N  I        + +A+   + +    + P + +YN LI G C+ 
Sbjct: 324 NRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNS 383

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD----LMEKMVNDSNLFH 315
            RI    KL+DEM      PD V+Y  ++  LCKE RI E       +M+K V  + + +
Sbjct: 384 GRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTY 443

Query: 316 D--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +        +  +  AK++ N+M + G  PD++ Y  ++NG+C+   +D+A  + ++M H
Sbjct: 444 NAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRH 503

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
               P+  SY + ++GLC+ G+    +E+++   +   +P+ ITY++++    +     +
Sbjct: 504 KNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDK 563

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  + R++V+ G +P     + ++ +LC+  K+  A+  ++  L  GC+ NV  +T LI 
Sbjct: 564 AISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILIN 622

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
             C+ G   EA+ LL  M    + PD +T+  II  L +    ++A +L  +M+++GLV
Sbjct: 623 ALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 130/511 (25%), Positives = 229/511 (44%), Gaps = 28/511 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           ++Y  +++ L K      A  +   +  RGI      ++ L+      G+ +    +L+ 
Sbjct: 196 VMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTK 255

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  V P+    N  I  L    ++ +A   L  M   G  P+++TYN L++GYC    
Sbjct: 256 MVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSREN 315

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A +L + M  +G  PD ++Y  ++   CK K + E   L +++ N            
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN------------ 363

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
             K LV         P + +Y ++++G C  G +   KK+L +M+     P+ V+Y   +
Sbjct: 364 --KNLV---------PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           + LC  G+ LEA  ++    ++   PN +TY+ +M G      ++ A D+   MVK G  
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  +  N+LI   C+   +D A    +E  +K    ++ ++ SLI G C  G +     L
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC- 560
           LD+M    + PD +TY  ++DA  K    ++A  L  +++ +G+ P   T   ++   C 
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCK 591

Query: 561 --QVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
             ++   ED LK L         +T Y  +I  LC  G   EA  +L K+       DA 
Sbjct: 592 GEKLKMAEDALKHLLMHGCSPNVQT-YTILINALCKDGSFGEAMLLLSKMEDNDRPPDAI 650

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           T  +++   L +     A K+   M  R L+
Sbjct: 651 TFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 232/500 (46%), Gaps = 32/500 (6%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R   + +A+   + M +    P   + +  +  +V       A+    ++Q  GI+P++ 
Sbjct: 32  RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           T+  LI  Y        A  L+  +   G  P+ V++ T++   C    I +  D  + +
Sbjct: 92  TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +    LF                       D  TY  ++NG  + G++  A  +LQ+M  
Sbjct: 152 LAQGYLF-----------------------DQFTYGTLINGLSKNGQIKAALHLLQEMEK 188

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
              +PN V Y+A ++GLC +G   +A  + +   E     +A+TY+ ++ G    G+  E
Sbjct: 189 SSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQE 248

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
              ++ +MV++   P     N+LI +LC+EG++  A+  +     +G   ++V + +L+ 
Sbjct: 249 VTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALME 308

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G+C + ++ EA  L + M     +PD + Y  +ID   K   V+EA  L  ++ +K LVP
Sbjct: 309 GYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVP 368

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKIL 605
           T+ +Y ++I   C  GR+  + KLL++M    +      YN +I+ LC  G + EA  +L
Sbjct: 369 TIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVL 428

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
             +++   K +  T + +++ Y  +    +A  +  RM    L PD+     ++  +++ 
Sbjct: 429 VMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDI-----LNYNVLIN 483

Query: 666 G--KSEEADTLMLRFVERGH 683
           G  K+E  D  ++ F E  H
Sbjct: 484 GYCKTEMVDEAIVLFKEMRH 503



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 159/335 (47%), Gaps = 9/335 (2%)

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           CR   +D A     +M      P T  +   L  +   G    A  +    + +  +P+ 
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            T++++++    +   + A  ++  ++K G+ P  V  N +I   C  G +  A  F Q 
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            L +G   +   + +LI G  + G ++ AL LL +M      P+ V Y+ +ID L K+G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQ 587
           V +A  L  ++  +G++   VTY ++I   C VGR +++ +LL KM+ +      Y  N 
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I+ LC  G + EA  +L  + +   K D  T + L+E Y ++     A ++  RM  R 
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 648 LIPDLKLCKKVSERLILEG--KSEEADTLMLRFVE 680
           L PD+     ++  ++++G  K++  D  M+ F E
Sbjct: 331 LEPDV-----LNYNVLIDGYCKTKMVDEAMVLFKE 360


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 162/597 (27%), Positives = 265/597 (44%), Gaps = 90/597 (15%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  M+    K      A R  RL+   G+E      + L++ Y R G LR A ++L
Sbjct: 182 DTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLL 241

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            MM       N       I  L     + +AL  L  M   G +PN+ TY  LI+G C  
Sbjct: 242 MMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKE 301

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEKMVNDSN---- 312
            RI DA  L+DEMP +G  P   +Y  ++   CK  R+K+   ++ LME   N  N    
Sbjct: 302 GRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEG--NGCNPDDW 359

Query: 313 ----LFHD--QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD---------- 356
               L H    G+ +EA+EL+N     G  P V+T+T ++NG+C+  ++D          
Sbjct: 360 TYNSLIHGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMI 419

Query: 357 -------------------------QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
                                    +AK  L +++ +G  PN V YT+ ++  C  GK  
Sbjct: 420 SSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVG 479

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP--------- 442
            A E+   +E E   PNA TYS +++GL ++ KL +A  ++ +M + G  P         
Sbjct: 480 AALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLI 539

Query: 443 ------------------------TPVE--INLLIQSLCREGKMDGAKKFMQECLNKGCA 476
                                   TP E   N+L  +LC+ G+ + A  F+   + KG  
Sbjct: 540 QGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVV 596

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
           +  V +TSL+ GF + G+ E A +L++ M       D+ TY+ ++ AL K  ++ EA  +
Sbjct: 597 LTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSI 656

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCS 594
           + +M  +G+   +V Y  +I    + G+ +    +  +M+S     +A  Y   I + C 
Sbjct: 657 LDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCK 716

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            G +EEAG ++G++ R     D  T +V +    + G    A+    RM + +  P+
Sbjct: 717 IGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPN 773



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 156/642 (24%), Positives = 282/642 (43%), Gaps = 88/642 (13%)

Query: 120 DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKL-------------CQG------- 159
           D   AL FF W  R+  +RH    +  +L++L++ +              C G       
Sbjct: 69  DPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMISCSGTAEDMRE 128

Query: 160 ---AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
              A + +R    + +   P+ ++  + +  R     +   + S + +  + P+ +  NT
Sbjct: 129 AVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNT 188

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            I        LA A R+   ++ +G+  +  T N L+ GYC    ++ A  L+  MPL G
Sbjct: 189 MIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMG 248

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND--SNLFHD----------QGRIEEAK 324
           C  ++ SY  ++  LC+ + ++E   L+  M+ D  S   H           +GRI +A+
Sbjct: 249 CRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDAR 308

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L+++M + G +P V TY A+++G+C+ G L  A  +   M  +GC P+  +Y + ++GL
Sbjct: 309 VLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGL 368

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG-------------------------- 418
           C  GK  EA E++N +    ++P  IT++ +++G                          
Sbjct: 369 C-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDL 427

Query: 419 ---------LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
                    L ++ +L EA D + E+   G  P  V    +I + C+ GK+  A +  + 
Sbjct: 428 QAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKL 487

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
             ++GC  N   ++SLI G  Q   L +A++L+  M      P  +TYTT+I    K   
Sbjct: 488 TEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 547

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK---MLSKQKCRTAYN 586
            + A  L   M   GL P    Y  +    C+ GR E+    L K   +L+K      Y 
Sbjct: 548 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTK----VTYT 603

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY-----LNKGIPLLAYKVAC 641
            +++     G  E A  ++ K++    KAD+ T  VL+++      LN+ + +L      
Sbjct: 604 SLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILD----- 658

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +M  R +  ++     +   +I EGK + A ++    +  GH
Sbjct: 659 QMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH 700



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 231/510 (45%), Gaps = 44/510 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++ +L K    + AK  L  +   G+      ++ ++ AY + GK+  A+ V 
Sbjct: 426 DLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVF 485

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            + +     PN    ++ I+ L+   KL KA+  + +MQ  GITP V+TY  LI+G C  
Sbjct: 486 KLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKK 545

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           H   +A +L + M   G +PD+ +Y  +   LCK                        GR
Sbjct: 546 HEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCK-----------------------SGR 582

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            EEA      + + G +   VTYT++V+GF + G  + A  ++++M + GCK ++ +Y+ 
Sbjct: 583 AEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSV 639

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L  LC   K  EA  +++         N + Y++++  + +EGK   A  +  EM+  G
Sbjct: 640 LLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSG 699

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P+ +   + I S C+ G+++ A   + E    G A +VV +   I G    G ++ A 
Sbjct: 700 HKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAF 759

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNG----------------RVEEATELMMKMLSK 543
           S L  M     +P+  TY  ++    K                  +++   +L+ +M+  
Sbjct: 760 STLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKH 819

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEA 601
           GL PT VTY ++I  +C+  R+E+   LL+ ML K        Y  +I+  C     E+A
Sbjct: 820 GLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKA 879

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKG 631
              +  ++    +    + H L+    ++G
Sbjct: 880 ASFVTNMIECGFQPHLESYHYLITGLCDEG 909



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/385 (21%), Positives = 158/385 (41%), Gaps = 28/385 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++  SK    + A  ++  M   G +     +S L+ A  +  KL  A+ +L  
Sbjct: 600 VTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQ 659

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    V  N++     I  ++   K   A      M  +G  P+ +TY   I  YC + R
Sbjct: 660 MTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGR 719

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTV------MGYL-CKEKRIKEVRD------------ 302
           I++A  LI EM   G +PD V+Y         MGY+ C    +K + D            
Sbjct: 720 IEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWL 779

Query: 303 ---------LMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
                    L      D++   +  +++   +L+ +M + G  P  VTY++++ GFC+  
Sbjct: 780 LLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKAT 839

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            L++A  +L  M      PN   YT  +   C      +A   +    E  + P+  +Y 
Sbjct: 840 RLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYH 899

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++ GL  EG   +A  +  ++++  +    V   +L   L + G +D   + +    N+
Sbjct: 900 YLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENR 959

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEA 498
            C ++   ++ +     +   + E+
Sbjct: 960 HCRIDSETYSMVTNNIHEASGMYES 984


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 247/505 (48%), Gaps = 25/505 (4%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L  L K+K       + + M  RGI+     F+ L+  + + G +  A  VL+ + K  
Sbjct: 76  ILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMG 135

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
             P+ +  NT I    +  ++ +AL F +++   G   + ++Y  LI G C +   + A+
Sbjct: 136 YEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAAL 195

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKEL 326
           +L+  +  K    D V Y T++  +CK+K + +  DL  +MV+         RI      
Sbjct: 196 ELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSR--------RISS---- 243

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
                      ++VTY+A+++GFC VG+L  A  +  +M      P+  ++   ++  C 
Sbjct: 244 -----------NIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCK 292

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G+  EA+  +    ++   P+ +TY+ +M G     +++ A  ++  M  +G   T   
Sbjct: 293 EGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRS 352

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            N++I   C+   +D A K  +E  +K    NV+ + SLI G C+ G +  AL L+D M+
Sbjct: 353 YNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMH 412

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
              + PD +TY++I+DAL KN  V++A  L++K+  +G+ P + TY  +I   C+ GR+E
Sbjct: 413 DRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLE 472

Query: 567 DLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           D   + E +L K    T   Y  +I+  CS G  +EA  +L K+   +   DA T  +++
Sbjct: 473 DARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIII 532

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLI 649
            S  +K     A K+   M  R L+
Sbjct: 533 CSLFDKDENDKAEKLLREMITRGLL 557



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 205/394 (52%), Gaps = 12/394 (3%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G      ++  L+    + G+ R A+ +L  +    V  ++++ +T I  +     +  A
Sbjct: 170 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDA 229

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
                 M    I+ N++TY+ LI G+C + ++KDAI L ++M  +  +PD  ++  ++  
Sbjct: 230 FDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDA 289

Query: 291 LCKEKRIKEVRDLMEKMVNDS--------NLFHDQ----GRIEEAKELVNQMSQMGCIPD 338
            CKE R+KE ++ +  M+           N   D       +  AK ++N MS  G    
Sbjct: 290 FCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTAT 349

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V +Y  V+NGFC++  +DQA K+ ++M+H    PN ++Y + ++GLC +G+   A E+I+
Sbjct: 350 VRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELID 409

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
              +    P+ ITYS ++  L +   + +A  ++ ++  +G  P      +LI  LC+ G
Sbjct: 410 LMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGG 469

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           +++ A+   ++ L KG  + V  +T +I+GFC  G  +EALSLL  M      PD +TY 
Sbjct: 470 RLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYE 529

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
            II +L      ++A +L+ +M+++GL+ + + Y
Sbjct: 530 IIICSLFDKDENDKAEKLLREMITRGLLYSFLEY 563



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 217/483 (44%), Gaps = 31/483 (6%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            + R AL+     D +   + D ++Y  +++ + K K    A  +   M  R I      
Sbjct: 189 GETRAALELLRRVDGKL-VQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVT 247

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           +S L+  +   GKL++A+ + + M    + P++   N  +       ++ +A   L  M 
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMM 307

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             GI P+++TYN L+ GYC ++ +  A  +++ M  +G +    SY  V+   CK K + 
Sbjct: 308 KQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVD 367

Query: 299 EVRDLMEKM--------VNDSNLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           +   L ++M        V   N   D     GRI  A EL++ M   G  PD++TY++++
Sbjct: 368 QAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSIL 427

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C+   +D+A  +L ++   G +PN  +YT  ++GLC  G+  +AR +      + + 
Sbjct: 428 DALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYN 487

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
               TY+V++ G    G   EA  ++ +M      P  +   ++I SL  + + D A+K 
Sbjct: 488 LTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKL 547

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID---- 522
           ++E + +G   + + + S    F        A  L +D   C    ++  +  ++     
Sbjct: 548 LREMITRGLLYSFLEYGSWSLSFMA----APAHFLNNDSLQCTSSQESGNWAKLLLERIY 603

Query: 523 ---ALSKNGRVEEATELMMKML-------SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
               L+K+   ++  E    ++        +G +  V TY  +I  +C  G  ++ L LL
Sbjct: 604 CDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALL 663

Query: 573 EKM 575
            KM
Sbjct: 664 SKM 666



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 203/436 (46%), Gaps = 14/436 (3%)

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDS- 311
           + DA+ L + +  +  +P  + +  ++G L K K    V  L +KM         VN + 
Sbjct: 51  VVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNI 110

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             N F   G I  A  ++ ++ +MG  PD +T    + GFC  G++ QA     ++   G
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALG 170

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
              + VSY   +NGLC  G++  A E++   + +    + + YS ++  + ++  +++A 
Sbjct: 171 FHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAF 230

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           D+  EMV +      V  + LI   C  GK+  A     +  ++    +V  F  L+  F
Sbjct: 231 DLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAF 290

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C++G ++EA + L  M      PD VTY +++D       V  A  ++  M  +G+  TV
Sbjct: 291 CKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATV 350

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGK 607
            +Y  VI+ +C++  V+  +KL ++M  KQ       YN +I+ LC  G +  A +++  
Sbjct: 351 RSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDL 410

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +     + D  T   ++++     +   A  +  ++ ++ + P++     + + L   G+
Sbjct: 411 MHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGR 470

Query: 668 SEEADTLMLRFVERGH 683
            E+A  +    + +G+
Sbjct: 471 LEDARNIFEDLLVKGY 486



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/414 (22%), Positives = 179/414 (43%), Gaps = 38/414 (9%)

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
           S  FH+   + +A  L N + +    P  + +  ++    +         + Q+M + G 
Sbjct: 42  STTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGI 101

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           KPN V++   +N  C  G    A  ++    +  + P+ IT +  + G   +G++ +A +
Sbjct: 102 KPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALN 161

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREG----------KMDG------------------ 462
              ++V  GF    V    LI  LC+ G          ++DG                  
Sbjct: 162 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMC 221

Query: 463 -------AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
                  A     E +++  + N+V +++LI GFC  G L++A+ L + M     +PD  
Sbjct: 222 KDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVY 281

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           T+  ++DA  K GRV+EA   +  M+ +G+ P +VTY +++  YC V  V     +L  M
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM 341

Query: 576 LSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
             +    T  +YN VI   C    +++A K+  ++       +  T + L++     G  
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRI 401

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
             A ++   M +R   PD+     + + L      ++A  L+++  ++G I+P 
Sbjct: 402 SYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQG-IRPN 454



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 153/348 (43%), Gaps = 28/348 (8%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           AK +L  M+ RG+     +++ ++  + +   +  AM +   M    + PN++  N+ I 
Sbjct: 334 AKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLID 393

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    +++ AL  ++ M   G  P+++TY+ ++   C  H +  AI L+ ++  +G  P
Sbjct: 394 GLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRP 453

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM-VNDSNL-----------FHDQGRIEEAKELV 327
           +  +Y  ++  LCK  R+++ R++ E + V   NL           F   G  +EA  L+
Sbjct: 454 NMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLL 513

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY----TAFLNG 383
           ++M    CIPD +TY  ++       E D+A+K+L++M   G   + + Y     +F+  
Sbjct: 514 SKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAA 573

Query: 384 LCH--NGKSLEAREMINTSEEEWWTP---NAITYSVVMHGLRREGKLSEACDVVR----E 434
             H  N  SL+     ++ E   W       I    V+       K  E   V+     +
Sbjct: 574 PAHFLNNDSLQCT---SSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCD 630

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
             K+G+        ++IQ  C  G  D +   + +    GC  + V +
Sbjct: 631 WSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 257/539 (47%), Gaps = 67/539 (12%)

Query: 93  PKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYR--HDPIVYYMMLEI 150
           P+ E  L    R+L P  +  VL+   D  V+L FF W  R  R    H+      +L  
Sbjct: 19  PEAEAALAKYSRNLVPNTVGRVLQVIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRT 78

Query: 151 LSKTKLCQGAKRVLR--LMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAA 206
           L K +    A ++ R  L+   G  C     +Y  L+  + +AG +  A  +L+ M++  
Sbjct: 79  LVKARRHHQAYQIFRDELL---GQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERG 135

Query: 207 VAPNLL--------ICNTA-------------------------IHVLVVGNKLAKALRF 233
            +P+++        +CNT                          +H L   N+L++A + 
Sbjct: 136 HSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQLSEARQM 195

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           +E M   GI P+V+TYN LI G C  +R+++A +L++ M  +   P+ V+Y T++   CK
Sbjct: 196 IEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCK 255

Query: 294 EKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
                                   G    A +L+ +M Q G  PDVVT+ ++++GFC+  
Sbjct: 256 -----------------------TGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKS 292

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           ++D+A ++L  M    C PN V+Y   ++GLC  G++ EA E+++  +     P+ ITY+
Sbjct: 293 KIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYN 352

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++    R  ++ +A  +   MV++G  P  +    L  +L +  + D A   +    + 
Sbjct: 353 SLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDA 412

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   N+  F SL+ G C    L+EA  LL  M     DP   TY  ++  L K GRV++A
Sbjct: 413 GAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDA 472

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK--CRTAYNQVIE 590
            E+++ M+S+G+ P V +  T++H   + G+ +  L   +++++ +   C  +Y +++E
Sbjct: 473 KEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLE 531



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 222/467 (47%), Gaps = 32/467 (6%)

Query: 210 NLLICNTAIHVLVVGNKLAKALRFLERMQLAG--ITPNVLTYNCLIKGYCDLHRIKDAIK 267
           N   CN  +  LV   +  +A +   R +L G     N +TYN LI G+C    ++ A +
Sbjct: 68  NNFTCNCLLRTLVKARRHHQAYQIF-RDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQ 126

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELV 327
           L+ EM  +G SPD V++ +++  LC                N  NL        E+ E  
Sbjct: 127 LLAEMKERGHSPDVVTHSSIVQALC----------------NTGNLSRAMQYFRESVE-- 168

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
                  C PD V +  +V+G C+  +L +A++M+++M   G  P+ V+Y + ++GLC +
Sbjct: 169 -------CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKS 221

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            +  EAR+++ T  +    PN +TY+ +++G  + G    A  ++  M++ G  P  V  
Sbjct: 222 YRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTF 281

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKG-CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           N LI   C++ K+D A + +   + KG CA N+V +  LI G C  G   EA  LL +M 
Sbjct: 282 NSLISGFCQKSKIDKACEVLH-LMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMD 340

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                PD +TY ++I    +N ++E+A ++   M+ +G++P  ++Y T+     +  R +
Sbjct: 341 GRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFD 400

Query: 567 DLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           +   LL+ M           +N ++E LC    L+EA  +L  + R      AST  VLV
Sbjct: 401 EAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLV 460

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
                 G    A +V   M +  + P +     +   L  EGK + A
Sbjct: 461 TGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLA 507



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 38/204 (18%)

Query: 481 NFTS--LIRGFCQKGDLEEALSLLDDMYLCKK-DPDTVTYTTIIDALSKNGRVEEATELM 537
           NFT   L+R   +     +A  +  D  L +  D + +TY T+I    K G +E A +L+
Sbjct: 69  NFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLL 128

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGY 597
            +M  +G  P VVT+ +++   C  G +   ++   + +        +N ++  LC    
Sbjct: 129 AEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQ 188

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
           L EA +++ +                                   M  R ++PD+     
Sbjct: 189 LSEARQMIEE-----------------------------------MSERGIVPDVVTYNS 213

Query: 658 VSERLILEGKSEEADTLMLRFVER 681
           + + L    + EEA  L+   V+R
Sbjct: 214 LIDGLCKSYRMEEARQLLETMVKR 237


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 242/516 (46%), Gaps = 16/516 (3%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+  Y + G +R A  V+ MM    +AP    CN  +  L+  + +    +    M+ AG
Sbjct: 181 LVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAG 240

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I P+V TY+  ++ +C       A K+ +EM  + C+ ++V+Y  ++  LC+   ++E  
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 300

Query: 302 DLMEKMVNDSNLFHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
              E+MV D  L  D              GR++EAK L+++MS  G  P+VV Y  +V+G
Sbjct: 301 GFKEEMV-DYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
           F + G+  +A  +L +M   G +PN + Y   + GLC  G+   A +++N   +    P+
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPD 419

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
             TY  +M G  +      A +++ EM   G  P      ++I  LC+ G+   A   ++
Sbjct: 420 TFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLE 479

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E +++G   N   +  LI G  ++G +  A   L++M      PD   Y ++I  LS  G
Sbjct: 480 EMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVG 539

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYN 586
           R+EEA E   ++  +GLVP   TY  +IH YC+   +E   +LL++ML+   +     Y 
Sbjct: 540 RIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYT 599

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            ++E        E+   IL  +L +  K D     +++ +        +A+ V   +   
Sbjct: 600 DLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 659

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            L+PDL +   +   L      E+A  L+    + G
Sbjct: 660 GLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEG 695



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/526 (25%), Positives = 238/526 (45%), Gaps = 14/526 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y   LE   K +    AK+V   M RR        ++ ++    R+G +  A    
Sbjct: 244 DVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 303

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    ++P+       ++ L  G +L +A   L+ M  +G+ PNV+ Y  L+ G+   
Sbjct: 304 EEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKE 363

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
            +  +A  +++EM   G  P+K+ Y  ++  LCK  ++     L+ +M+      D+  +
Sbjct: 364 GKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTY 423

Query: 315 HD--QGRIEE-----AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           H   QG  +      A EL+N+M   G +P+  TY  ++NG C+ GE  +A  +L++M  
Sbjct: 424 HPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMIS 483

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G KPN   Y   + G    G    A E +    +    P+   Y+ ++ GL   G++ E
Sbjct: 484 EGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEE 543

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A +   ++ K+G  P     + LI   C+   ++ A + +Q+ LN G   N   +T L+ 
Sbjct: 544 AEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLE 603

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G+ +  D E+  S+L  M      PD   Y  +I  LS++  +E A  ++ ++   GLVP
Sbjct: 604 GYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVP 663

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            +  Y ++I   C++  +E  + LL++M  +  +     YN +I+  C  G +  A  + 
Sbjct: 664 DLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVF 723

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
             +L      +  T   L++     G    A+ +   M +R + PD
Sbjct: 724 DSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPD 769



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/563 (24%), Positives = 257/563 (45%), Gaps = 13/563 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++  L K    + AK +L  M+  G++     ++ L+  + + GK   A  +L
Sbjct: 314 DAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDIL 373

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M  A V PN ++ +  I  L    +L +A + L  M   G  P+  TY+ L++G+   
Sbjct: 374 NEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQH 433

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLF-- 314
           +    A +L++EM   G  P+  +Y  ++  LC+    KE  +L+E+M+++    N F  
Sbjct: 434 YDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMY 493

Query: 315 -------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +G I  A E +  M++   +PD+  Y +++ G   VG +++A++   Q+  
Sbjct: 494 APLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQK 553

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+  +Y+  ++G C      +A +++         PNA TY+ ++ G  +     +
Sbjct: 554 RGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEK 613

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
              +++ M+  G  P      ++I++L R   M+ A   + E    G   ++  ++SLI 
Sbjct: 614 VSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLIS 673

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C+  D+E+A+ LLD+M     +P  V Y  +ID   ++G +  A  +   +L+KGL+P
Sbjct: 674 GLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLP 733

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY-NQVIENLCSFGYLEEAGKILG 606
             VTY  +I   C+ G + D   L + ML +     A+   V+   CS     E    L 
Sbjct: 734 NCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLT 793

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
           + +     A  S    LV  +  +G      K+   M +R ++P+ +  + V       G
Sbjct: 794 EEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAG 853

Query: 667 KSEEADTLMLRFVERGHIQPKSE 689
           K  EA  +     ++   Q  ++
Sbjct: 854 KLCEAHRVFAELQQKKASQSSTD 876



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/435 (21%), Positives = 178/435 (40%), Gaps = 86/435 (19%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
            Y +M+  L +    + A  +L  M   G+  +P AF Y  L++ +S+ G +  A   L 
Sbjct: 457 TYGIMINGLCQNGESKEAGNLLEEMISEGL--KPNAFMYAPLIIGHSKEGHISLACESLE 514

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M KA V P+L   N+ I  L    ++ +A  +  ++Q  G+ P+  TY+ LI GYC   
Sbjct: 515 NMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTR 574

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFH 315
            ++ A +L+ +M   G  P+  +Y  ++    K    ++V  +++ M+      D++++ 
Sbjct: 575 NLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYG 634

Query: 316 ------------------------------------------DQGRIEEAKELVNQMSQM 333
                                                         +E+A  L+++M++ 
Sbjct: 635 IVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKE 694

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  P +V Y A+++GFCR G++ +A+ +   +   G  PN V+YTA ++G C NG   +A
Sbjct: 695 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDA 754

Query: 394 REMINTSEEEWWTPNAITYSVV----------------------------------MHGL 419
            ++     +    P+A  Y+V+                                  + G 
Sbjct: 755 FDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGF 814

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            + G+L E   ++  M+ +   P    +  +I    + GK+  A +   E   K  + + 
Sbjct: 815 CKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSS 874

Query: 480 VN-FTSLIRGFCQKG 493
            + F+ L      KG
Sbjct: 875 TDRFSLLFTDMINKG 889



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 129/312 (41%), Gaps = 38/312 (12%)

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           V++   ++ G +  A  VV  M   G  PT    N L++ L R   M+   K        
Sbjct: 180 VLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGA 239

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE-- 531
           G   +V  +++ +   C+  D + A  + ++M       + VTY  +I  L ++G VE  
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299

Query: 532 ---------------------------------EATELMMKMLSKGLVPTVVTYRTVIHR 558
                                            EA  L+ +M   GL P VV Y T++  
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359

Query: 559 YCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           + + G+  +   +L +M+S   Q  +  Y+ +I  LC  G L  A K+L ++++   + D
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPD 419

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
             T H L++ +        A+++   M N  ++P+      +   L   G+S+EA  L+ 
Sbjct: 420 TFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLE 479

Query: 677 RFVERGHIQPKS 688
             +  G ++P +
Sbjct: 480 EMISEG-LKPNA 490


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 205/385 (53%), Gaps = 19/385 (4%)

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
            L  M+ AGITP ++T+  LI+  C+L+    A+++  +M      PD   Y  V+G+LC
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 293 KEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVV 340
           K  ++       E+MV    L                 + E+  ++  +M   G  P++V
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TY  VVNG+C+ G +DQA  +++++   G  P+   Y+  ++GLC + +  EARE+   +
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMA 180

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
             +    + I Y+  + GL + GKL EA  V  +M++ G  P PV  N++I SLC++ ++
Sbjct: 181 AGD--VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY-LCKKDPDTVTYTT 519
             AK+ M + + + C   V   T L+ G C+   +EEA  +L+ M     + P  VTY+ 
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +ID L K  R+++A  ++ KM   G VP VVTY  +I  +C+VGR+++  +L ++M  ++
Sbjct: 299 VIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRM-HER 357

Query: 580 KCRT---AYNQVIENLCSFGYLEEA 601
            C +   AYN +I   C    ++EA
Sbjct: 358 GCASDVVAYNILIRGYCRAAKVDEA 382



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 180/374 (48%), Gaps = 28/374 (7%)

Query: 175 RPEAFSYLMVA--YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           +P+AF Y +V     +  KL  A      M ++   P+ +     +H L    K  +  +
Sbjct: 46  KPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQ 105

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
             E M   G +P ++TY  ++ GYC   RI  A+ L+  +   G SP    Y T++  LC
Sbjct: 106 IFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLC 165

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           K  R +E R+L E    D                         + DV+ YT+ ++G C+ 
Sbjct: 166 KHDRHEEARELFEMAAGD-------------------------VQDVIVYTSFISGLCKA 200

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
           G+LD+AK +  +M   GC P+ VSY   +  LC + +  EA+E+++ + E    P     
Sbjct: 201 GKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVC 260

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKG-FFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           +V++ GL +  ++ EAC ++  M++ G   P+ V  + +I  LC+  ++D A   +Q+  
Sbjct: 261 TVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMR 320

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
             GC  +VV +T++I  FC+ G L+EA  L   M+      D V Y  +I    +  +V+
Sbjct: 321 RAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVD 380

Query: 532 EATELMMKMLSKGL 545
           EA  ++ +M  +G+
Sbjct: 381 EAIAMIEEMAGRGI 394



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 200/423 (47%), Gaps = 38/423 (8%)

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELV 327
           L+ EM   G +P  V++ +++  LC+              +N +N         +A ++ 
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCE--------------LNFTN---------KALQIF 37

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           +QM  M   PD   YT V+   C++ +LD A    +QM   GC P+ V+YT  ++ L   
Sbjct: 38  HQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKA 97

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            K  +  ++      +  +P  +TY+ V++G  + G++ +A  ++R +   G  P+    
Sbjct: 98  CKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLY 157

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           + LI  LC+  + + A++  +  +  G   +V+ +TS I G C+ G L+EA ++   M  
Sbjct: 158 STLIDGLCKHDRHEEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIE 215

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD V+Y  II +L K+ RV EA ELM + + +  +P V     ++   C+  RVE+
Sbjct: 216 AGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEE 275

Query: 568 LLKLLEKML---SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
              +LE+ML    +      Y+ VI+ LC    L++A  +L K+ R     D  T   ++
Sbjct: 276 ACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAII 335

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG-----KSEEADTLMLRFV 679
           +++   G    A ++  RM  R    D+     V+  +++ G     K +EA  ++    
Sbjct: 336 DAFCKVGRLDEARELFQRMHERGCASDV-----VAYNILIRGYCRAAKVDEAIAMIEEMA 390

Query: 680 ERG 682
            RG
Sbjct: 391 GRG 393



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 156/316 (49%), Gaps = 19/316 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + Y +++  L K    +   ++   M  +G    PE  +Y  V   Y +AG++  A+ 
Sbjct: 83  DKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS--PELVTYATVVNGYCKAGRIDQALS 140

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           ++  ++    +P+  + +T I  L   ++  +A    E    AG   +V+ Y   I G C
Sbjct: 141 LMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE--MAAGDVQDVIVYTSFISGLC 198

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL---- 313
              ++ +A  +  +M   GC+PD VSY  ++  LCK+ R+ E ++LM++ +    +    
Sbjct: 199 KAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVP 258

Query: 314 --------FHDQGRIEEAKELVNQMSQMGC-IPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                        R+EEA  ++ +M + G   P VVTY+AV++G C+   LD A  +LQ+
Sbjct: 259 VCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQK 318

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   GC P+ V+YTA ++  C  G+  EARE+     E     + + Y++++ G  R  K
Sbjct: 319 MRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAK 378

Query: 425 LSEACDVVREMVKKGF 440
           + EA  ++ EM  +G 
Sbjct: 379 VDEAIAMIEEMAGRGI 394



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 125/281 (44%)

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           TP  +T+  ++  L      ++A  +  +M+     P      ++I  LC+  K+D A  
Sbjct: 11  TPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAAS 70

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
           + ++ +  GC  + V +T L+    +    E+   + ++M      P+ VTY T+++   
Sbjct: 71  YFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYC 130

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY 585
           K GR+++A  LM ++   G  P+   Y T+I   C+  R E+  +L E      +    Y
Sbjct: 131 KAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAGDVQDVIVY 190

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
              I  LC  G L+EA  +  K++      D  + +V++ S         A ++  +   
Sbjct: 191 TSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAME 250

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           R  +P + +C  + + L    + EEA  ++ R +E G   P
Sbjct: 251 RKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAP 291


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 241/501 (48%), Gaps = 27/501 (5%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R+  +  +   Y  ++  L ++  C+ A  V R M   G++   + FS LMVA  +   +
Sbjct: 186 REAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNI 245

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
           +  M +L  M+   + PN+      I VL    K+ +A R ++RM   G  P+V+TY  L
Sbjct: 246 KTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVL 305

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I   C   ++ DA+ L  +M      PDKV+Y T                L++K      
Sbjct: 306 IDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVT----------------LLDK------ 343

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
            F D G +++ +++  +M   G  PDVVT+T +VN  C+ G +++A  +L  M   G  P
Sbjct: 344 -FSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLP 402

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N  +Y   ++GL    +  +A ++ +  E     P A TY +++    + G   +A +  
Sbjct: 403 NLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETF 462

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            +M  +G  P  V  N  + SL   G++  AK    E  + G A + V +  +++ + + 
Sbjct: 463 EKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKV 522

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G ++EA+ LL +M   + +PD +   ++ID L K GRVEEA ++  +M    L PTVVTY
Sbjct: 523 GQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTY 582

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVL 609
             ++    + G+++  ++L E M +   C      +N +++ LC    ++ A K+  K+ 
Sbjct: 583 NILLAGLGKEGQIQKAVQLFESM-NGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMT 641

Query: 610 RTASKADASTCHVLVESYLNK 630
               + D  T + ++  ++ +
Sbjct: 642 TMNCRPDVLTFNTIIHGFIKQ 662



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 134/555 (24%), Positives = 240/555 (43%), Gaps = 52/555 (9%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            D IV   +++ L K    + A ++   M    +      ++ L+    + G+++ A+ + 
Sbjct: 543  DVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLF 602

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
              M     +PN +  NT +  L   +++  AL+   +M      P+VLT+N +I G+   
Sbjct: 603  ESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQ 662

Query: 260  HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN------DSNL 313
            ++IK+AI L  +M  K   PD V+  T++  + K  +I++   + E          D + 
Sbjct: 663  NQIKNAIWLFHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSF 721

Query: 314  FHD--QGRIEEAKE-----------------------------------------LVNQM 330
            + D   G + EA                                            V   
Sbjct: 722  WEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFT 781

Query: 331  SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
             ++G  P +  Y  +++GF  V  ++ A  + ++M   GC P+T +Y + ++    +GK 
Sbjct: 782  KELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI 841

Query: 391  LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             E  ++ +        PN ITY++V+  L +  +L +A D+   +V   F PTP     L
Sbjct: 842  NELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPL 901

Query: 451  IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
            I  L + G++D A +     ++ GC  N   +  L+ G+ + G ++ A      M     
Sbjct: 902  IDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGI 961

Query: 511  DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
             PD  +YT ++D L   GRV++A     K+   GL P +V Y  +I+   +  R E+ L 
Sbjct: 962  RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALS 1021

Query: 571  LLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
            L  +M ++        YN +I NL   G +EEAGKI  ++     K +  T + L+  Y 
Sbjct: 1022 LFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYT 1081

Query: 629  NKGIPLLAYKVACRM 643
              G   LAY +  +M
Sbjct: 1082 LSGNSELAYGIYKKM 1096



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/558 (22%), Positives = 263/558 (47%), Gaps = 56/558 (10%)

Query: 167 MARRGIECRPEAFSYLMVA--YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           M   G+E  P A++Y+++   + ++G    A+     M+   +APN++ CN +++ L   
Sbjct: 430 MESLGVE--PTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEM 487

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            +L +A      ++ +G+ P+ +TYN ++K Y  + ++ +AIKL+ EM    C PD +  
Sbjct: 488 GRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVI 547

Query: 285 YTVMGYLCKEKRIKEVRDL---MEKM-----VNDSNLF----HDQGRIEEAKELVNQMSQ 332
            +++  L K  R++E   +   ME+M     V   N+       +G+I++A +L   M+ 
Sbjct: 548 NSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNG 607

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            GC P+ +T+  +++  C+  E+D A KM  +M    C+P+ +++   ++G     +   
Sbjct: 608 HGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKN 667

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM-------VKKGFFPTPV 445
           A  + +   ++   P+ +T   ++ G+ + G++ +A  +  +        + + F+   +
Sbjct: 668 AIWLFH-QMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVM 726

Query: 446 EINL-----------------------------LIQSLCREGKMDGAKK-FMQECLNKGC 475
              L                             +I+ LC+  K   A+  F++     G 
Sbjct: 727 GGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGV 786

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
              +  +  LI GF +  ++E A +L ++M      PDT TY ++IDA  K+G++ E  +
Sbjct: 787 KPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFD 846

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLC 593
           L  +ML++G  P  +TY  VI    +  R++  + L   ++S     T   +  +I+ L 
Sbjct: 847 LYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLL 906

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
             G L++A ++   ++    + +++  ++LV  Y   G    A +   RM    + PDLK
Sbjct: 907 KSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLK 966

Query: 654 LCKKVSERLILEGKSEEA 671
               + + L + G+ ++A
Sbjct: 967 SYTILVDILCIAGRVDDA 984



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 187/373 (50%), Gaps = 15/373 (4%)

Query: 175 RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           +P+  +Y  L+  +S  G L     + + M+    AP+++     ++ L    ++ +A  
Sbjct: 331 KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFD 390

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
            L+ M+  G+ PN+ TYN LI G    +R+ DA+ L   M   G  P   +Y  ++ Y  
Sbjct: 391 LLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHG 450

Query: 293 KEKRIKEVRDLMEKM----------VNDSNLFH--DQGRIEEAKELVNQMSQMGCIPDVV 340
           K     +  +  EKM            +++L+   + GR+ EAK + N++   G  PD V
Sbjct: 451 KSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSV 510

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TY  ++  + +VG++D+A K+L +M    C+P+ +   + ++ L   G+  EA +M    
Sbjct: 511 TYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRM 570

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           EE    P  +TY++++ GL +EG++ +A  +   M   G  P  +  N L+  LC+  ++
Sbjct: 571 EEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEV 630

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D A K   +     C  +V+ F ++I GF ++  ++ A+ L   M    + PD VT  T+
Sbjct: 631 DLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLR-PDHVTLCTL 689

Query: 521 IDALSKNGRVEEA 533
           +  + K+G++E+A
Sbjct: 690 LPGVIKSGQIEDA 702



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/529 (22%), Positives = 230/529 (43%), Gaps = 52/529 (9%)

Query: 142  IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
            + Y ++L  L K    Q A ++   M   G       F+ L+    +  ++  A+ +   
Sbjct: 580  VTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYK 639

Query: 202  MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
            M      P++L  NT IH  +  N++  A+    +M+   + P+ +T   L+ G     +
Sbjct: 640  MTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQ 698

Query: 262  IKDAIKLIDEMPLK-GCSPDKVSYYTVMG------------------------------- 289
            I+DA ++ ++   + G + D+  +  VMG                               
Sbjct: 699  IEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLI 758

Query: 290  ----YLCKEKRIKEVRDLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQ 332
                 LCK K+    R++  K   +  +             F +   +E A  L  +M  
Sbjct: 759  PIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKS 818

Query: 333  MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
             GC PD  TY ++++   + G++++   +  +M   GCKPNT++Y   ++ L  + +  +
Sbjct: 819  AGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDK 878

Query: 393  AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
            A ++        ++P   T+  ++ GL + G+L +A ++   MV  G  P     N+L+ 
Sbjct: 879  AMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVN 938

Query: 453  SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
               + G +D A +F +  + +G   ++ ++T L+   C  G +++AL   + +     DP
Sbjct: 939  GYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDP 998

Query: 513  DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
            D V Y  +I+ L ++ R EEA  L  +M ++G+VP + TY ++I     VG +E+  K+ 
Sbjct: 999  DLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIY 1058

Query: 573  EKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            E++  +  +     YN +I      G  E A  I  K++      +  T
Sbjct: 1059 EELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGT 1107



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 157/330 (47%), Gaps = 12/330 (3%)

Query: 203  QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            ++  V P L + N  I   +  + +  A    E M+ AG  P+  TYN LI  +    +I
Sbjct: 782  KELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI 841

Query: 263  KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----------- 311
             +   L DEM  +GC P+ ++Y  V+  L K  R+ +  DL   +V+             
Sbjct: 842  NELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPL 901

Query: 312  -NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
             +     GR+++A E+ + M   GC P+   Y  +VNG+ ++G +D A +  ++M   G 
Sbjct: 902  IDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGI 961

Query: 371  KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            +P+  SYT  ++ LC  G+  +A       ++    P+ + Y+++++GL R  +  EA  
Sbjct: 962  RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALS 1021

Query: 431  VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
            +  EM  +G  P     N LI +L   G ++ A K  +E    G   NV  + +LIRG+ 
Sbjct: 1022 LFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYT 1081

Query: 491  QKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
              G+ E A  +   M +   DP+T T+  +
Sbjct: 1082 LSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 126/575 (21%), Positives = 251/575 (43%), Gaps = 58/575 (10%)

Query: 160  AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
            AK +   +   G+      ++ +M  YS+ G++  A+ +LS M K    P++++ N+ I 
Sbjct: 493  AKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLID 552

Query: 220  VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
             L    ++ +A +   RM+   + P V+TYN L+ G     +I+ A++L + M   GCSP
Sbjct: 553  TLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSP 612

Query: 280  DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
            + +++ T++  LCK   +     +  KM   +            + F  Q +I+ A  L 
Sbjct: 613  NTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLF 672

Query: 328  NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG------------------ 369
            +QM ++   PD VT   ++ G  + G+++ A ++ +  ++                    
Sbjct: 673  HQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILT 731

Query: 370  -------------------CKPNTVSYTAFLNGLCHNGKSLEAREM-INTSEEEWWTPNA 409
                               CK ++V     +  LC + K+  AR + +  ++E    P  
Sbjct: 732  EAGTEKAILFGERLVCRAICKDDSV-LIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTL 790

Query: 410  ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
              Y++++ G      +  A ++  EM   G  P     N LI +  + GK++       E
Sbjct: 791  KVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDE 850

Query: 470  CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
             L +GC  N + +  +I    +   L++A+ L  ++      P   T+  +ID L K+GR
Sbjct: 851  MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGR 910

Query: 530  VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYN 586
            +++A E+   M+  G  P    Y  +++ Y ++G V+   +  ++M+ K+  R    +Y 
Sbjct: 911  LDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMV-KEGIRPDLKSYT 969

Query: 587  QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
             +++ LC  G +++A     K+ +     D    ++++           A  +   M NR
Sbjct: 970  ILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNR 1029

Query: 647  NLIPDLKLCKKVSERLILEGKSEEADTLM--LRFV 679
             ++PDL     +   L + G  EEA  +   L+F+
Sbjct: 1030 GIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFI 1064



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 162/372 (43%), Gaps = 3/372 (0%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           R+E+   + + M +     +V TY  +       G L QA   L++M   G   N  SY 
Sbjct: 139 RVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYN 198

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++ L  +G   EA E+      E   P+  T+S +M    +   +     ++ EM   
Sbjct: 199 GLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESM 258

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P      + I+ L R+GK+D A + M+   + GC  +VV +T LI   C    L++A
Sbjct: 259 GLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDA 318

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           + L   M      PD VTY T++D  S  G +++  ++  +M + G  P VVT+  +++ 
Sbjct: 319 MCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNA 378

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            C+ GR+ +   LL+ M  +        YN +I  L     L++A  +   +     +  
Sbjct: 379 LCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPT 438

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
           A T  +L++ +   G P  A +   +M  R + P++  C      L   G+  EA  +  
Sbjct: 439 AYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFN 498

Query: 677 RFVERGHIQPKS 688
                G + P S
Sbjct: 499 ELKSSG-LAPDS 509



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 27/257 (10%)

Query: 128  FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVA 185
             Y+      +   P  +  +++ L K+     A  +   M   G  CRP +  ++ L+  
Sbjct: 882  LYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYG--CRPNSAIYNILVNG 939

Query: 186  YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
            Y + G +  A      M K  + P+L      + +L +  ++  AL + E+++ AG+ P+
Sbjct: 940  YGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPD 999

Query: 246  VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
            ++ YN +I G     R ++A+ L  EM  +G  PD  +Y +++              L  
Sbjct: 1000 LVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLI--------------LNL 1045

Query: 306  KMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             +V         G IEEA ++  ++  +G  P+V TY A++ G+   G  + A  + ++M
Sbjct: 1046 GIV---------GMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKM 1096

Query: 366  YHHGCKPNTVSYTAFLN 382
               GC PNT ++    N
Sbjct: 1097 MVGGCDPNTGTFAQLPN 1113


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/523 (27%), Positives = 256/523 (48%), Gaps = 17/523 (3%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           KL +A+ +   M ++   P+++  N  +  +   NK    +   ERMQ   I+ ++ +YN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--- 307
            LI  +C   ++  A+ ++ +M   G  PD V+  +++   C  KRI E   L+++M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 308 ------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                 V  + L H      +  EA  L+++M   GC PD+ TY  VVNG C+ G++D A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L++M     + + V YT  ++ LC+     +A  +    + +   PN +TY+ ++  
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L   G+ S+A  ++ +M+++   P  V  + LI +  +EGK+  A+K   E + +    +
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +  ++SLI GFC    L+EA  + + M      P+ VTY T+I    K  RVEE  EL  
Sbjct: 344 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 403

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFG 596
           +M  +GLV   VTY T+I    Q G  +   K+ +KM+S         Y+ +++ LC +G
Sbjct: 404 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 463

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            LE+A  +   + ++  + D  T ++++E     G     + + C +  + + P++ +  
Sbjct: 464 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 523

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH--LQRQRV 697
            +      +G  EEAD L     E G + P S  +  L R R+
Sbjct: 524 TMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYNTLIRARL 565



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 246/506 (48%), Gaps = 14/506 (2%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +  R  +D   Y +++    +      A  VL  M + G E      S L+  Y    ++
Sbjct: 91  QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 150

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A+ ++  M      PN +  NT IH L + NK ++A+  ++RM   G  P++ TY  +
Sbjct: 151 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 210

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-- 310
           + G C    I  A+ L+ +M       D V Y T++  LC  K + +  +L  +M N   
Sbjct: 211 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 270

Query: 311 -------SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                  ++L     + GR  +A  L++ M +    P+VVT++A+++ F + G+L +A+K
Sbjct: 271 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 330

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +  +M      P+  +Y++ +NG C + +  EA+ M      +   PN +TY+ ++ G  
Sbjct: 331 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 390

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +  ++ E  ++ REM ++G     V  N LIQ L + G  D A+K  ++ ++ G   +++
Sbjct: 391 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 450

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            ++ L+ G C+ G LE+AL + + +   K +PD  TY  +I+ + K G+VE+  +L   +
Sbjct: 451 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 510

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYL 598
             KG+ P V+ Y T+I  +C+ G  E+   L  +M        +  YN +I      G  
Sbjct: 511 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 570

Query: 599 EEAGKILGKVLRTASKADASTCHVLV 624
             + +++ ++       DAST  +++
Sbjct: 571 AASAELIKEMRSCGFVGDASTISMVI 596



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 212/417 (50%), Gaps = 23/417 (5%)

Query: 167 MARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           M  RG  C+P+ F+Y  V     + G +  A+ +L  M+K  +  +++I  T I  L   
Sbjct: 195 MVARG--CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 252

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             +  AL     M   GI PNV+TYN LI+  C+  R  DA +L+ +M  +  +P+ V++
Sbjct: 253 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 312

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVN---DSNLF-----------HDQGRIEEAKELVNQM 330
             ++    KE ++ E   L ++M+    D ++F           HD  R++EAK +   M
Sbjct: 313 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD--RLDEAKHMFELM 370

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
               C P+VVTY  ++ GFC+   +++  ++ ++M   G   NTV+Y   + GL   G  
Sbjct: 371 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 430

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             A+++      +   P+ ITYS+++ GL + GKL +A  V   + K    P     N++
Sbjct: 431 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 490

Query: 451 IQSLCREGKM-DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           I+ +C+ GK+ DG   F    L KG   NV+ +T++I GFC+KG  EEA +L  +M    
Sbjct: 491 IEGMCKAGKVEDGWDLFCSLSL-KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 549

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
             P++ TY T+I A  ++G    + EL+ +M S G V    T   VI+     GR+E
Sbjct: 550 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLE 605



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 193/405 (47%), Gaps = 31/405 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D ++Y  +++ L   K    A  +   M  +GI  RP   +Y  L+      G+  +A  
Sbjct: 238 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI--RPNVVTYNSLIRCLCNYGRWSDASR 295

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +LS M +  + PN++  +  I   V   KL +A +  + M    I P++ TY+ LI G+C
Sbjct: 296 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 355

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              R+ +A  + + M  K C P+ V+Y T++   CK KR+                    
Sbjct: 356 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV-------------------- 395

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
              EE  EL  +MSQ G + + VTY  ++ G  + G+ D A+K+ ++M   G  P+ ++Y
Sbjct: 396 ---EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 452

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +  L+GLC  GK  +A  +    ++    P+  TY++++ G+ + GK+ +  D+   +  
Sbjct: 453 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 512

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P  +    +I   CR+G  + A    +E    G   N   + +LIR   + GD   
Sbjct: 513 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAA 572

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           +  L+ +M  C    D  T + +I+ L  +GR+E++    ++MLS
Sbjct: 573 SAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS---YLEMLS 613


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 189/390 (48%), Gaps = 39/390 (10%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GK   A  ++  M +    P+       I  L    ++ KA    + M+  G+ P+V TY
Sbjct: 431 GKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTY 490

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             LI  +C    I+ A    DEM   GCSP+ V+Y  ++    K K++ +  D+  +MV 
Sbjct: 491 TILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVG 550

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM---- 365
           D+                       C P+ +TY+A+++G C+ GE+ +A ++  ++    
Sbjct: 551 DA-----------------------CYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTS 587

Query: 366 -------YHHG-----CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
                  Y  G       PN V+Y A +NGLC   K  +A ++++        PN I Y 
Sbjct: 588 DNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYD 647

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++ G  + G++  A +V   M K G+ P+      LI  + ++G++D A K + + L  
Sbjct: 648 ALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 707

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
            C  NVV +T+++ G C+ G+ E+AL+LL  M      P+ VTYT +ID L K G+V+  
Sbjct: 708 SCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAG 767

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
            EL M+M +KG  P  VTYR +I+  C  G
Sbjct: 768 LELFMQMKTKGCAPNYVTYRILINHCCAAG 797



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 155/685 (22%), Positives = 276/685 (40%), Gaps = 144/685 (21%)

Query: 90  AWSPKLEGELRNLLRS----LKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYY 145
           A+    +G+    LR     L    + AVL +     + ++FF WA+RQ  Y+H    Y 
Sbjct: 79  AYGADFDGKAERFLRRYREFLTDSVVVAVLGAVRSPELCVRFFLWAERQVGYKHTGACYD 138

Query: 146 MMLEILSKTKLCQGAKRVLR---------------LMARR------------------GI 172
            + E+L      + A+R+LR               ++ RR                    
Sbjct: 139 ALAEVLGFEDPARTAERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDF 198

Query: 173 ECRPEAFSY--LMVAYSRAGKLRNAMYV-------------------------------- 198
             RP A +Y  L+   + AG++  A  V                                
Sbjct: 199 GYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDA 258

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG--- 255
           L ++++     + ++C   I  L+  +   +A+ FL RM+     PNV+TY  L+ G   
Sbjct: 259 LDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLK 318

Query: 256 --------------------------------YCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
                                           YC+      A KL + M   GC P  V 
Sbjct: 319 KKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVV 378

Query: 284 YYTVMGYLCKEKRI--KEVRDLMEKM-------------VNDSNLFH---DQGRIEEAKE 325
           Y   +G +C  + +   E+ DL EK+             +N +N        G+ E+A +
Sbjct: 379 YNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQ 438

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           +V +M + G +PD  TYT V+   C+   +D+A  + Q+M   G  P+  +YT  ++  C
Sbjct: 439 IVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFC 498

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   +A+   +       +PN +TY+ ++H   +  +L +A D+   MV    +P  +
Sbjct: 499 KAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAI 558

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKG----------------CAVNVVNFTSLIRGF 489
             + LI  LC+ G++  A +   + +                    + NVV + +L+ G 
Sbjct: 559 TYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGL 618

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+   + +A  LLD M     +P+ + Y  ++D   K G ++ A E+ ++M   G +P+V
Sbjct: 619 CKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSV 678

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILG 606
            TY ++I R  + GR++  +K+L +ML K  C      Y  +++ LC  G  E+A  +L 
Sbjct: 679 HTYTSLIDRMFKDGRLDLAMKVLSQML-KDSCNPNVVTYTAMVDGLCKTGETEKALNLLS 737

Query: 607 KVLRTASKADASTCHVLVESYLNKG 631
            + +     +  T   L++     G
Sbjct: 738 LMEKKGCSPNVVTYTALIDGLGKAG 762



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 226/459 (49%), Gaps = 40/459 (8%)

Query: 154 TKLCQGAKRV----LRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAV 207
           T LCQ AKRV    L     + +   P+ ++Y  L+ ++ +AG +  A      M+ A  
Sbjct: 460 TFLCQ-AKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGC 518

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA-- 265
           +PN++     +H  +   +L +A     RM      PN +TY+ LI G C    I+ A  
Sbjct: 519 SPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACE 578

Query: 266 --IKLI-------DEMPLKG-----CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---- 307
              KLI        +   +G      SP+ V+Y  ++  LCK +++ +  DL++ M    
Sbjct: 579 VYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAG 638

Query: 308 ------VNDS--NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                 V D+  + F   G I+ A+E+  +M++ G +P V TYT++++   + G LD A 
Sbjct: 639 CEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 698

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           K+L QM    C PN V+YTA ++GLC  G++ +A  +++  E++  +PN +TY+ ++ GL
Sbjct: 699 KVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGL 758

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            + GK+    ++  +M  KG  P  V   +LI   C  G +D A   + E         +
Sbjct: 759 GKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYL 818

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL--- 536
             + + ++GF ++     +L LL++M      P    Y  +ID+ SK GR+E A EL   
Sbjct: 819 QGYRTTVQGFSKR--FLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKE 876

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           MM++ S   + +   + ++I   C   +VE+ + L  +M
Sbjct: 877 MMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEM 915



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 245/532 (46%), Gaps = 22/532 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A ++++ M R+G       ++ ++    +A ++  A  +   M+K  V P++      I 
Sbjct: 436 AFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILID 495

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A  + + M+ AG +PNV+TY  L+  Y    ++  A  +   M    C P
Sbjct: 496 SFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYP 555

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL----FHDQGRIEEAKELVNQMSQMGC 335
           + ++Y  ++  LCK   I++  ++  K++  S+     F+ +G+  +             
Sbjct: 556 NAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTIS---------- 605

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            P+VVTY A+VNG C+  ++  A  +L  M   GC+PN + Y A ++G C  G+   A+E
Sbjct: 606 -PNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQE 664

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +     +  + P+  TY+ ++  + ++G+L  A  V+ +M+K    P  V    ++  LC
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLC 724

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + G+ + A   +     KGC+ NVV +T+LI G  + G ++  L L   M      P+ V
Sbjct: 725 KTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYV 784

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY  +I+     G +++A  L+ +M        +  YRT +  + +  R    L LLE+M
Sbjct: 785 TYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK--RFLASLGLLEEM 842

Query: 576 LSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV---LVESYLNK 630
            S      A  Y  +I++    G LE A ++  +++  +S  + ++  +   L+++    
Sbjct: 843 ESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLS 902

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                A  +   M  R ++PDL     + + LI   K  EA  L     + G
Sbjct: 903 SQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEG 954



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 207/473 (43%), Gaps = 70/473 (14%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y ++++   K  L + A+     M  R   C P   +Y  L+ AY ++ +L  A  
Sbjct: 486 DVYTYTILIDSFCKAGLIEQAQSWFDEM--RSAGCSPNVVTYTALLHAYLKSKQLYQAND 543

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR----------------FLERMQLAG 241
           +   M   A  PN +  +  I  L    ++ KA                  + E      
Sbjct: 544 IFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDT 603

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I+PNV+TY  L+ G C   ++ DA  L+D M   GC P+++ Y  ++   CK   I   +
Sbjct: 604 ISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQ 663

Query: 302 DLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
           ++  +M     L             F D GR++ A ++++QM +  C P+VVTYTA+V+G
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKD-GRLDLAMKVLSQMLKDSCNPNVVTYTAMVDG 722

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
            C+ GE ++A  +L  M   GC PN V+YTA ++GL   GK     E+    + +   PN
Sbjct: 723 LCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPN 782

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVK--------------KGF-------------- 440
            +TY ++++     G L +A  ++ EM +              +GF              
Sbjct: 783 YVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEM 842

Query: 441 -----FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN---FTSLIRGFCQK 492
                 P      +LI S  + G+++ A +  +E +    ++N+ +    TSLI+  C  
Sbjct: 843 ESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLS 902

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
             +EEA++L  +M      PD   +  ++  L +  +  EA +L   +  +G+
Sbjct: 903 SQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV 955


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/531 (24%), Positives = 256/531 (48%), Gaps = 20/531 (3%)

Query: 91  WSPKLEGELRNLLRSLKPRQICAVLRSQADER---VALQFFYWADRQWRYRHDPIVYYMM 147
             P L  E+R+   S  P ++  +L    D R    A+  F          H    YY +
Sbjct: 29  LGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNH--TTYYNL 86

Query: 148 LEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV 207
           +  L K +L   A  +L  M  RG+       + ++    RAG+LR+A+ V   M  A  
Sbjct: 87  IHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH- 145

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
            P+ L     +H L    +L  A++ L+ M  A   P+  T   +++  C   R+ DA +
Sbjct: 146 PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARE 205

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----------RDLMEKMVNDSNLFHDQ 317
           L++EM  +G + + ++Y  ++  LCK +R+ E           R     +V  S +    
Sbjct: 206 LVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGL 265

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            +    ++ V+   +M C P  +TY +++ G+CR G++D+A ++L +M    C P+ ++Y
Sbjct: 266 CKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITY 325

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T  ++  C  G+  +A E+         +P+ +T++ ++ GL  EG++ +A +++ E+ +
Sbjct: 326 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR 385

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  PT    N ++   C+  ++  A++ + +  ++G   N V +  L+ G C+ G  ++
Sbjct: 386 RGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 445

Query: 498 ALSLLDDMYLCKKD-PDTVT-YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           AL  LD +       P +V  Y  I+DAL ++GR ++A +   +M+ +G VP   T+ TV
Sbjct: 446 ALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATV 505

Query: 556 IHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKI 604
           +   C+  + +   +LLE+M+           + V+   C  G +++A ++
Sbjct: 506 VFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 209/424 (49%), Gaps = 39/424 (9%)

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELV 327
           L+DE+  +G SPD V   T++  LC      + RD    M                  L 
Sbjct: 33  LLDEIRDRGLSPDPVELNTILAELC------DARDTTTAMA-----------------LF 69

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           ++M+++G + +  TY  +++  C+   LD+A  +L  M   G  P T+ +   + GLC  
Sbjct: 70  DKMAELGAV-NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRA 128

Query: 388 GKSLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           G+   A    R+M      +   P+ +TY+ ++HGL + G+L +A  V++EMV     P 
Sbjct: 129 GRLRHALGVYRQM-----NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPD 183

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS-LL 502
              + +++QSLC   ++D A++ ++E L++G A N + +++L+ G C+   L+EA++ LL
Sbjct: 184 NTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLL 243

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
            ++      PD VTY+T+ID L K GR+ +A ++  +M      PT +TY ++I  YC+ 
Sbjct: 244 GEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRA 300

Query: 563 GRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           G +++ ++LL KM+          Y  ++   C  G L++A ++  +++      D  T 
Sbjct: 301 GDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTF 360

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
             LV+    +G    A ++   +  R   P +     V +      +  +A+ L+  F  
Sbjct: 361 TSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRS 420

Query: 681 RGHI 684
           RG +
Sbjct: 421 RGFV 424


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 164/658 (24%), Positives = 296/658 (44%), Gaps = 46/658 (6%)

Query: 75  HP----LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRS-QADERVALQFFY 129
           HP    LV  +CRL+ LR          +  L        + AVLR+ + +   +L FF 
Sbjct: 37  HPAPPELVSRICRLVLLRRC------NAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQ 90

Query: 130 WADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLM-------------------ARR 170
           +  +Q  +R +   Y  ++ ILS+ ++    +  L  +                     R
Sbjct: 91  FVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYR 150

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
                P  F  ++  Y   G  +NA+YV   M K    P+L  CN+ ++ LV   +   A
Sbjct: 151 EFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTA 210

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-G 289
               ++M   GI P+V   + ++  +C   ++ +A   + +M   G  P+ V+Y++++ G
Sbjct: 211 HYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING 270

Query: 290 Y--LCKEKRIKEVRDLMEKMVNDSNL---------FHDQGRIEEAKELVNQMS-QMGCIP 337
           Y  L   +  K V   M +     N+         +  Q +++EA++++  M  +   +P
Sbjct: 271 YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVP 330

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D   Y  +++G+CR G++D A ++L +M   G K N     + +NG C  G+  EA  +I
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
               +    P++ +Y+ ++ G  REG  SEA ++  +M+++G  PT +  N L++ LCR 
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G  D A +     +  G A + V +++L+ G  +  + E A +L  D+         +T+
Sbjct: 451 GAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
            T+I  L K G++ EA E+  KM   G  P  +TYRT+I  YC+   V    K+   M  
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 578 KQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
           +    +   YN +I  L     L E   +L ++       +  T   L++ +  +G+   
Sbjct: 571 EXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQ 693
           A+     M    L  ++ +C  +   L   G+ +EA+ LM + V+ G   P  E  L+
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF-PDHECFLK 687



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 251/554 (45%), Gaps = 81/554 (14%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++   +T     A R+L  M R G++      + L+  Y + G++  A  V+
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M    + P+    NT +         ++A    ++M   GI P VLTYN L+KG C +
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMVNDSNLFH 315
               DA+++   M   G +PD+V Y T++  L K +  +      +D++ +    S +  
Sbjct: 451 GAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 316 DQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK------- 360
           +         G++ EA+E+ ++M  +GC PD +TY  +++G+C+   + QA K       
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 361 ----------------------------MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
                                       +L +M   G  PN V+Y A ++G C  G   +
Sbjct: 571 EXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT--------- 443
           A        E   + N I  S ++ GL R G++ EA  ++++MV  GFFP          
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 690

Query: 444 ---------------------PVEI--NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
                                P  I  N+ I  LC+ GK+D A++F      KG   +  
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +LI G+   G+++EA  L D+M      P+ VTY  +I+ L K+  V+ A  L  K+
Sbjct: 751 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYL 598
             KGL P VVTY T+I  YC++G ++   KL +KM+ +        Y+ +I  LC  G +
Sbjct: 811 HQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDI 870

Query: 599 EEAGKILGKVLRTA 612
           E + K+L ++++  
Sbjct: 871 ERSMKLLNQMIKAG 884



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 224/503 (44%), Gaps = 81/503 (16%)

Query: 135 WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
           W  + D   Y  +L+   +      A  +   M + GIE     ++ L+    R G   +
Sbjct: 396 WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDD 455

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +  +M K  VAP+ +  +T +  L        A    + +   G T + +T+N +I 
Sbjct: 456 ALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 515

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEK----- 306
           G C + ++ +A ++ D+M   GCSPD ++Y T++   CK   + +   V+  ME+     
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISP 575

Query: 307 ---MVND--SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC----------- 350
              M N   S LF  + R+ E  +L+ +M   G  P++VTY A+++G+C           
Sbjct: 576 SIEMYNSLISGLFKSR-RLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 634

Query: 351 ------------------------RVGELDQAKKMLQQMYHHG----------------- 369
                                   R+G +D+A  ++Q+M  HG                 
Sbjct: 635 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 694

Query: 370 -----------CK----PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
                      CK    PN + Y   + GLC  GK  +AR   +    + + P+  TY  
Sbjct: 695 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 754

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++HG    G + EA  +  EM+++G  P  V  N LI  LC+   +D A++   +   KG
Sbjct: 755 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 814

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              NVV + +LI G+C+ G+++ A  L D M      P  VTY+ +I+ L K+G +E + 
Sbjct: 815 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSM 874

Query: 535 ELMMKMLSKGLVPTVVTYRTVIH 557
           +L+ +M+  G+   ++ Y T++ 
Sbjct: 875 KLLNQMIKAGVDSKLIEYCTLVQ 897



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 253/557 (45%), Gaps = 43/557 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y+ ++         + AK VL+ M+ +G+      ++ L+  Y +  K+  A  VL  
Sbjct: 262 VTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRG 321

Query: 202 MQK-AAVAPNLLICNTAIHVLVVG----NKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           MQ+ AA+ P+      A  VL+ G     K+  A+R L+ M   G+  N+   N LI GY
Sbjct: 322 MQEEAALVPD----ERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 377

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND----SN 312
           C    I +A  +I  M      PD  SY T++   C+E    E  +L +KM+ +    + 
Sbjct: 378 CKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTV 437

Query: 313 LFHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           L ++         G  ++A ++ + M + G  PD V Y+ +++G  ++   + A  + + 
Sbjct: 438 LTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKD 497

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           +   G   + +++   ++GLC  GK +EA E+ +  ++   +P+ ITY  ++ G  +   
Sbjct: 498 ILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASN 557

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + +A  V   M ++   P+    N LI  L +  ++      + E   +G   N+V + +
Sbjct: 558 VGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGA 617

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G+C++G L++A S   +M       + +  +T++  L + GR++EA  LM KM+  G
Sbjct: 618 LIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG 677

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-------AYNQVIENLCSFGY 597
             P    +     RY  + ++ D L         + C+T        YN  I  LC  G 
Sbjct: 678 FFPDHECFLKSDIRYAAIQKIADSL--------DESCKTFLLPNNIVYNIAIAGLCKTGK 729

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
           +++A +    +       D  T   L+  Y   G    A+++   M  R L+P++     
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI----- 784

Query: 658 VSERLILEG--KSEEAD 672
           V+   ++ G  KSE  D
Sbjct: 785 VTYNALINGLCKSENVD 801



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 193/419 (46%), Gaps = 16/419 (3%)

Query: 130 WADRQWR-YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAY 186
           W D   R +    I +  M+  L K      A+ +   M   G  C P+  +Y  L+  Y
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG--CSPDGITYRTLIDGY 552

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
            +A  +  A  V   M++  ++P++ + N+ I  L    +L +    L  M + G+TPN+
Sbjct: 553 CKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNI 612

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           +TY  LI G+C    +  A     EM   G S + +   T++  L +  RI E   LM+K
Sbjct: 613 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 672

Query: 307 MVNDSNLFHDQ----------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
           MV D   F D             I++  + +++  +   +P+ + Y   + G C+ G++D
Sbjct: 673 MV-DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVD 731

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
            A++    +   G  P+  +Y   ++G    G   EA  + +        PN +TY+ ++
Sbjct: 732 DARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALI 791

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
           +GL +   +  A  +  ++ +KG FP  V  N LI   C+ G MD A K   + + +G +
Sbjct: 792 NGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGIS 851

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
            +VV +++LI G C+ GD+E ++ LL+ M     D   + Y T++    K     E ++
Sbjct: 852 PSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSK 910


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 236/502 (47%), Gaps = 23/502 (4%)

Query: 165 RLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           RL+ R      P AF +  ++ +  ++      +Y+   M+   + PNL+ CN  I+   
Sbjct: 75  RLLRR---NTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFC 131

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
               +  A     ++   G  P+ +T+  L KG C   +I+ A    D++   G   D++
Sbjct: 132 QLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQI 191

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ--------------GRIEEAKELVN 328
           SY T++  LCK    +   DL++++  D NL                    + EA +L +
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRV--DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFS 249

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +M   G  PDVVTY+A+++GFC +G+L  A  +  +M     KP+  ++   +N  C +G
Sbjct: 250 EMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDG 309

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K  E + + +   ++   PN +TY+ +M G     ++++A  +   M + G  P     +
Sbjct: 310 KMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYS 369

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           ++I   C+  K D A    +E   K    +VV ++SLI G  + G +  AL L+D M+  
Sbjct: 370 IMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDR 429

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P+  TY +I+DAL K  +V++A  L+ K   KG  P + TY  +I   CQ G++ED 
Sbjct: 430 GVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDA 489

Query: 569 LKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            K+ E +L K       AY  +I+  C  G   EA  +L K+       DA T  +++ S
Sbjct: 490 RKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILS 549

Query: 627 YLNKGIPLLAYKVACRMFNRNL 648
              K    +A K+   M  R L
Sbjct: 550 LFKKDENDMAEKLLREMIARGL 571



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/519 (24%), Positives = 254/519 (48%), Gaps = 14/519 (2%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           ++S     +     + +A+ + + + +    P     N  +  LV        L   ++M
Sbjct: 52  SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           +  GI PN++  N LI  +C L  I  A  +  ++   G  PD +++ T+   LC + +I
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQI 171

Query: 298 KEVRDLMEKMV---------NDSNLFHDQGRIEE---AKELVNQMSQMGCIPDVVTYTAV 345
           ++     +K+V         +   L H   ++ E   A +L+ ++      P+VV Y  +
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++  C+V  +++A  +  +M   G  P+ V+Y+A ++G C  GK  +A ++ N    E  
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENI 291

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+  T++++++   ++GK+ E   V   M+K+G  P  V  N L+   C   +++ AK 
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
                   G   ++ +++ +I GFC+    +EA++L  +M+     PD VTY+++ID LS
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
           K+GR+  A +L+ +M  +G+ P + TY +++   C+  +V+  + LL K   K  Q   +
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIS 471

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            Y+ +I+ LC  G LE+A K+   +L      D     ++++ +  +G+   A  +  +M
Sbjct: 472 TYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKM 531

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +   IPD K  + +   L  + +++ A+ L+   + RG
Sbjct: 532 EDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 214/422 (50%), Gaps = 25/422 (5%)

Query: 126 QFFYWADR--QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           Q F + D+     +  D I Y  ++  L K    + A  +L+ +    ++     ++ ++
Sbjct: 173 QAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTII 232

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
            +  +   +  A  + S M    ++P+++  +  I    +  KL  A+    +M L  I 
Sbjct: 233 DSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIK 292

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+V T+N L+  +C   ++K+   + D M  +G  P+ V+Y ++M   C    +KEV   
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC---LVKEV--- 346

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                             +AK + N M+Q G  PD+ +Y+ ++NGFC++ + D+A  + +
Sbjct: 347 -----------------NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFK 389

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M+     P+ V+Y++ ++GL  +G+   A ++++   +    PN  TY+ ++  L +  
Sbjct: 390 EMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTH 449

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           ++ +A  ++ +   KGF P     ++LI+ LC+ GK++ A+K  ++ L KG  ++V  +T
Sbjct: 450 QVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYT 509

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            +I+GFC +G   EAL+LL  M      PD  TY  II +L K    + A +L+ +M+++
Sbjct: 510 IMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 569

Query: 544 GL 545
           GL
Sbjct: 570 GL 571



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 173/349 (49%), Gaps = 12/349 (3%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           ++Y  +++ + K KL   A  +   M  +GI      +S L+  +   GKL++A+ + + 
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNK 285

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + P++   N  ++      K+ +     + M   GI PN +TYN L+ GYC +  
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSN 312
           +  A  + + M   G +PD  SY  ++   CK K+  E  +L ++M         V  S+
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 313 L---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L       GRI  A +LV+QM   G  P++ TY ++++  C+  ++D+A  +L +    G
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG 465

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            +P+  +Y+  + GLC +GK  +AR++      + +  +   Y++++ G   EG  +EA 
Sbjct: 466 FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEAL 525

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
            ++ +M   G  P      ++I SL ++ + D A+K ++E + +G  +N
Sbjct: 526 ALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLN 574



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 2/267 (0%)

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
           +   K N +SY++       N    +A  + N       TP A  ++ ++  L +     
Sbjct: 43  YSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYH 102

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
               + ++M  +G  P  V  N+LI   C+ G +  A     + L  G   + + FT+L 
Sbjct: 103 TVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLS 162

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           +G C KG +++A    D +       D ++Y T+I  L K G    A +L+ ++    + 
Sbjct: 163 KGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQ 222

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKI 604
           P VV Y T+I   C+V  V +   L  +M+SK        Y+ +I   C  G L++A  +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDL 282

Query: 605 LGKVLRTASKADASTCHVLVESYLNKG 631
             K++    K D  T ++LV ++   G
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDG 309


>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
 gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
          Length = 481

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 232/448 (51%), Gaps = 27/448 (6%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           + G L  A  ++ +M +    PN       I  LV   ++ +A R L+ M ++G+ P+V+
Sbjct: 34  KKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVMSGLVPDVI 93

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN ++ G+C   +++ AI L+++M L GC PD ++Y T+            +R L    
Sbjct: 94  TYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTI------------IRSLF--- 138

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                   D G+ ++A E      + GC+P ++ YT ++    +     +A ++L+ M  
Sbjct: 139 --------DNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAI 190

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+ V+Y + +N     GK  +A  +I         PNAITY+ ++H L   G   E
Sbjct: 191 EGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDE 250

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
             +++  M K    PT V  N+LI  LC+ G ++ A  F  + +++ C+ +++ + +L+ 
Sbjct: 251 VDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLT 310

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
             C++G ++EAL +   +      P  +TY T+ID L++ G ++EA +L  +M+ KG+ P
Sbjct: 311 ALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAP 370

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKI 604
             +T+R+++  +C + +VED +++L +M  K+  R   +AY  VI  LC    ++ A ++
Sbjct: 371 DGITHRSLVWGFCWIDQVEDAVEILREM-GKRDHRINSSAYRLVINGLCRNKRVDIAIQV 429

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGI 632
           L  ++    K D      L++S  + G+
Sbjct: 430 LEMMISGRYKPDEEIYSTLIKSVADAGM 457



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 205/408 (50%), Gaps = 22/408 (5%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A RVL+ M   G+   P+  +Y M+   + +  +LR+A+ +L  M  +   P+++  NT 
Sbjct: 76  ASRVLKTMVMSGL--VPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTI 133

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK---GYCDLHRIKDAIKLIDEMPL 274
           I  L    K  +A+ F       G  P ++ Y  LI+    +C   R   A++++++M +
Sbjct: 134 IRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVR---ALEVLEDMAI 190

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQ---GRIEE 322
           +GC PD V+Y +++ +  KE + ++   ++  +++          ++L H     G  +E
Sbjct: 191 EGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDE 250

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
             E++  M +    P VVTY  ++NG C+ G +++A     QM    C P+ ++Y   L 
Sbjct: 251 VDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLT 310

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
            LC  G   EA ++     +   +P  ITY+ V+ GL R G + EA  +  +M++KG  P
Sbjct: 311 ALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAP 370

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             +    L+   C   +++ A + ++E   +   +N   +  +I G C+   ++ A+ +L
Sbjct: 371 DGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVL 430

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           + M   +  PD   Y+T+I +++  G VEEA EL  K++ + ++ T++
Sbjct: 431 EMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKLIERKVLRTIL 478



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 16/356 (4%)

Query: 287 VMGYLCKEKRIKEVRDLMEKM--VN-------DSNLFHDQ---GRIEEAKELVNQMSQMG 334
           ++  LCK+  + E   L++ M  VN        +NL       GRIE A  ++  M   G
Sbjct: 28  ILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVMSG 87

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            +PDV+TY  +V GFC+  +L  A  +L+ M   GC P+ ++Y   +  L  NGK  +A 
Sbjct: 88  LVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAV 147

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E           P  I Y++++  + +      A +V+ +M  +G +P  V  N L+   
Sbjct: 148 EFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFA 207

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            +EGK + A   +   L+ G   N + + SL+   C  G  +E   +L  M      P  
Sbjct: 208 SKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTV 267

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VTY  +I+ L K G VE A    ++M+S+   P ++TY T++   C+ G V++ L++   
Sbjct: 268 VTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVF-V 326

Query: 575 MLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           +LS   C      YN VI+ L   GY++EA K+  +++      D  T   LV  +
Sbjct: 327 LLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGF 382



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 170/354 (48%), Gaps = 5/354 (1%)

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           T   +++  C+ G L +A K++  M      PN+   T  + GL   G+   A  ++ T 
Sbjct: 24  TNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTM 83

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
                 P+ ITY++++ G  +  +L  A D++ +M   G  P  +  N +I+SL   GK 
Sbjct: 84  VMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKF 143

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D A +F +  L +GC   ++ +T LI    +      AL +L+DM +    PD VTY ++
Sbjct: 144 DQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSL 203

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG---RVEDLLKLLEKMLS 577
           ++  SK G+ E+A  ++  +LS G+ P  +TY +++H  C  G    V+++L +++K  S
Sbjct: 204 VNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKT-S 262

Query: 578 KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
                  YN +I  LC  G +E A     +++      D  T + L+ +   +G+   A 
Sbjct: 263 HPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEAL 322

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
           +V   + + N  P L     V + L   G  +EA  L  + +E+G I P    H
Sbjct: 323 QVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKG-IAPDGITH 375



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 157/335 (46%), Gaps = 29/335 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIE-CRPEAFSY--LMVAYSRAGKLRNAMYV 198
           I Y +++E++ K   C G  R L ++    IE C P+  +Y  L+   S+ GK  +A  +
Sbjct: 163 IPYTILIELVWKH--C-GTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALI 219

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +  +    + PN +  N+ +H L       +    L  M+     P V+TYN LI G C 
Sbjct: 220 IYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCK 279

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
              ++ AI    +M  + CSPD ++Y T++  LCKE                       G
Sbjct: 280 CGLVERAINFFVQMVSENCSPDIITYNTLLTALCKE-----------------------G 316

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
            ++EA ++   +S   C P ++TY  V++G  R G +D+A K+  QM   G  P+ +++ 
Sbjct: 317 MVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHR 376

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           + + G C   +  +A E++    +     N+  Y +V++GL R  ++  A  V+  M+  
Sbjct: 377 SLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISG 436

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            + P     + LI+S+   G ++ A +  Q+ + +
Sbjct: 437 RYKPDEEIYSTLIKSVADAGMVEEADELHQKLIER 471


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 135/514 (26%), Positives = 244/514 (47%), Gaps = 32/514 (6%)

Query: 87  LRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA---DERVALQFFYWADRQWRYRHDPIV 143
           +++  +  L   L+N+L S K     +++         +  L FF +      + H    
Sbjct: 53  IKNIETKPLHISLKNILPSFKAHHFISLVNQNPYFLPPKSLLSFFDFLSSYPTFSHTVQS 112

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARR-----------------GIECRPEAFSYLMVAY 186
           Y  M+  L   ++ Q A+ +L  +  R                 G       F  LM  Y
Sbjct: 113 YCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVY 172

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
           +  G + +A+    + +K  +      C   +  ++  +    AL F   +  +G  PNV
Sbjct: 173 TEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNV 232

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDL 303
            T+N L+   C   ++KDA  + DE+   G  P  VS+ T++   CK   ++E   ++ +
Sbjct: 233 YTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMV 292

Query: 304 MEKMVNDSNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
           ME+     ++F           + ++E+A  L  +M   G +P+ VT+T ++NG C+ G 
Sbjct: 293 MEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGR 352

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           +D A ++ QQM+  G K + V Y   ++GLC  G   EAR+ +    +    P+  TY+ 
Sbjct: 353 VDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTT 412

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ G  +EG L  A ++ +EMVK+G     V    +I  LCR+GK+  A++ ++E L  G
Sbjct: 413 LLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAG 472

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              +   +T ++ GFC+KGD++    LL +M      P  +TY  +++ L K G+V+ A 
Sbjct: 473 LKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNAD 532

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
            L+  ML+ G+VP  +TY  ++  +C+ G++ D 
Sbjct: 533 MLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDF 566



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 186/364 (51%), Gaps = 15/364 (4%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            F+ LM    + GK+++A  +   ++K  + P  +  NT I+       L +  R    M
Sbjct: 234 TFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVM 293

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           +   + P+V TY+ LI G C   +++DA  L  EM  +G  P+ V++ T++   CK  R+
Sbjct: 294 EEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRV 353

Query: 298 KEVRDLMEKMVN-----DSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
               ++ ++M       D  L++         G   EA++ V +M++ G IPD  TYT +
Sbjct: 354 DLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTL 413

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G C+ G+L+ A +M ++M   G + + V++TA ++GLC +GK ++A   +        
Sbjct: 414 LDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGL 473

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+  TY++VM G  ++G +     +++EM   G  P  +  N+L+  LC++G++  A  
Sbjct: 474 KPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADM 533

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            +   LN G   + + +  L++G C+ G L +  ++  +M L     D  +Y +++  LS
Sbjct: 534 LLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEMGLVS---DYASYRSLLHELS 590

Query: 526 KNGR 529
           K  +
Sbjct: 591 KASK 594



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 155/309 (50%), Gaps = 2/309 (0%)

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G  PN  ++   +N LC  GK  +A+ + +   +    P A++++ +++G  + G L E 
Sbjct: 227 GYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEG 286

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             +   M +   FP     + LI  LC+E +++ A    +E  ++G   N V FT+LI G
Sbjct: 287 FRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLING 346

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C+ G ++ AL +   M+      D V Y T+ID L K G   EA + + +M  +GL+P 
Sbjct: 347 QCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPD 406

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
             TY T++   C+ G +E  L++ ++M+ +  Q    A+  +I  LC  G + +A + L 
Sbjct: 407 KFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLR 466

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
           ++LR   K D  T  ++++ +  KG   + +K+   M +   IP +     +   L  +G
Sbjct: 467 EMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQG 526

Query: 667 KSEEADTLM 675
           + + AD L+
Sbjct: 527 QVKNADMLL 535



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 10/197 (5%)

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           LE  L +LD  Y     P+  T+  +++ L K G+V++A  +  ++   GL PT V++ T
Sbjct: 217 LEFYLEILDSGY----PPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNT 272

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQ----KCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           +I+ YC+ G +E+  +L  KM+ ++         Y+ +I+ LC    LE+A  +  ++  
Sbjct: 273 LINGYCKSGNLEEGFRL--KMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCD 330

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                +  T   L+      G   LA ++  +MF + L  DL L   + + L   G   E
Sbjct: 331 RGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFRE 390

Query: 671 ADTLMLRFVERGHIQPK 687
           A   +    +RG I  K
Sbjct: 391 ARKFVGEMTKRGLIPDK 407



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 3/162 (1%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  ++  L +      A+R LR M R G++     ++ +M  + + G ++    +L
Sbjct: 441 DNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLL 500

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             MQ     P ++  N  ++ L    ++  A   L  M   G+ P+ +TYN L++G+C  
Sbjct: 501 KEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKH 560

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
            ++ D   +  EM   G   D  SY +++  L K  + ++ R
Sbjct: 561 GKLGDFQNVKTEM---GLVSDYASYRSLLHELSKASKDRQKR 599


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 152/573 (26%), Positives = 268/573 (46%), Gaps = 49/573 (8%)

Query: 100 RNLLRSLKPRQI-CAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           R L+ +L+   I  +VL     +  A Q F+    Q     D   Y  ++++L K     
Sbjct: 421 RGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVP-DVFTYNTLIDVLGKGGQMD 479

Query: 159 GAKRVLRLMARRGIEC----------------------RPE---------AFSYLMVAYS 187
               +++ M  +G EC                       P           ++ LM A+ 
Sbjct: 480 KVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFI 539

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
             G +  A+ +L +M+K    P ++   T +  L    +L +A+  L  M+  G  P+V+
Sbjct: 540 HNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVV 599

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TY+ L+  +    + ++++ L DEM  KGC  D  +Y  V+  LCK   + +  D+  +M
Sbjct: 600 TYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRM 659

Query: 308 VND-------------SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
             +             S+L  D+ +I+ A ++ N++ +   +PD   Y  +VNG  +   
Sbjct: 660 KEEGMEPLLGNYKTLLSSLVKDE-KIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNR 718

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           +D+A K++  M +    P+  +YT+ L+GL  +G+  EA  M     EE   P+ + Y+ 
Sbjct: 719 VDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTS 778

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           +M  L + GKLS A  + R M KK   P  V  + LI SL +EG+++ A  F +  ++KG
Sbjct: 779 LMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG 838

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           C  NV  ++SLI  F +KG ++ AL L ++M   +  P+ VTY  ++  L+K GR+  A 
Sbjct: 839 CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENL 592
           +L+ +M   G VP +VTY  +I    ++G V++     ++M  K        +  +IE+L
Sbjct: 899 KLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESL 958

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
                L EA ++   +          T +VL++
Sbjct: 959 GKVDKLLEACELFDSMEEEGYNPSVVTYNVLID 991



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 158/681 (23%), Positives = 291/681 (42%), Gaps = 95/681 (13%)

Query: 71  DEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYW 130
           D+F+   +  V R    R  W  ++  +L  L   L P  +C V+ +Q D  +A  FF W
Sbjct: 116 DKFKLKKINGVIR----RRKWDAEMGKQLERLKFKLNPGLVCDVVVNQKDLHLAKCFFTW 171

Query: 131 ADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
           A +Q  Y H    Y +M++ L+  +      ++L  M + G        + L+  +    
Sbjct: 172 AGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTN 231

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
            +  A+ + + M+     P+  + N  + +LV G     A+    ++    I P+  T+ 
Sbjct: 232 NVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFR 291

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
             +  +    R+  A + I EM   G  P   ++  ++  L K                 
Sbjct: 292 IFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVK----------------- 334

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                  G I+EA +  N M  + C P+VVTYT +VNG  + G L++A ++  +M  + C
Sbjct: 335 ------SGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNC 388

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            P+ ++Y   ++GL   G++  A  +    ++    PN  TY++++  L + G+  EA  
Sbjct: 389 SPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQ 448

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC--------------- 475
           +  ++ ++G  P     N LI  L + G+MD     ++E + KG                
Sbjct: 449 LFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGT 508

Query: 476 ----------------AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
                           ++  + + +L+  F   G ++EA+ LL+ M   +  P  VTYTT
Sbjct: 509 IEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTT 568

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           ++D L K GR++EA  L+ +M  +G  P+VVTY +++  + +  + E+ L L ++M+ K 
Sbjct: 569 LVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKG 628

Query: 580 KCR--TAYNQVIENLCS----------FGYLEEAG------------------------- 602
                + Y+ VI  LC           FG ++E G                         
Sbjct: 629 CVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFAL 688

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           +I  ++  ++   D    +++V   +       A K+   M N+N++PDL     + + L
Sbjct: 689 QIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGL 748

Query: 663 ILEGKSEEADTLMLRFVERGH 683
              G+ EEA  +  +  E GH
Sbjct: 749 GKSGRLEEAFNMFTKMTEEGH 769



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 153/590 (25%), Positives = 267/590 (45%), Gaps = 47/590 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  +++ L K      A  + + M  RG+      ++ ++    +AG+   A  + 
Sbjct: 391 DAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLF 450

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM-------------------QLA 240
             +++    P++   NT I VL  G ++ K L  ++ M                    + 
Sbjct: 451 HDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIE 510

Query: 241 GITPNV------------LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           G    V            +TYN L+  +     + +A+KL++ M    C P  V+Y T++
Sbjct: 511 GADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLV 570

Query: 289 GYLCKEKRIKEVRDLMEKM---------VNDSNL---FHDQGRIEEAKELVNQMSQMGCI 336
             L K  R+ E   L+ +M         V  S+L   F+ + + EE+  L ++M + GC+
Sbjct: 571 DGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCV 630

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
            DV TY+ V+N  C+  ++DQA  +  +M   G +P   +Y   L+ L  + K   A ++
Sbjct: 631 ADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQI 690

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
            N  +E    P+   Y+++++GL +  ++ EAC +V  M  +   P       L+  L +
Sbjct: 691 FNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGK 750

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            G+++ A     +   +G   +VV +TSL+    + G L  AL +   M   +  PD VT
Sbjct: 751 SGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVT 810

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y+++ID+L K GRVEEA       +SKG  P V  Y ++I  + + G V+  L+L E+M 
Sbjct: 811 YSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQ 870

Query: 577 SKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
            +Q C      YN ++  L   G L  A K+L ++ +     D  T ++L++     G+ 
Sbjct: 871 RRQ-CPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMV 929

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
             A     RM  + ++PD+     + E L    K  EA  L     E G+
Sbjct: 930 DEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGY 979



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 191/397 (48%), Gaps = 12/397 (3%)

Query: 167  MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
            M R+G       +S ++    ++  +  A+ V   M++  + P L    T +  LV   K
Sbjct: 624  MVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEK 683

Query: 227  LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
            +  AL+    +Q + + P+   YN ++ G    +R+ +A KL+D M  +   PD  +Y +
Sbjct: 684  IDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTS 743

Query: 287  VMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMG 334
            ++  L K  R++E  ++  KM  +             ++    G++  A  +   M++  
Sbjct: 744  LLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKR 803

Query: 335  CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            C+PDVVTY+++++   + G +++A    +     GC PN   Y++ ++     G    A 
Sbjct: 804  CVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRAL 863

Query: 395  EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            E+    +     PN +TY+ ++ GL + G+L+ A  ++ EM K G  P  V  N+LI  +
Sbjct: 864  ELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGV 923

Query: 455  CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
             + G +D A+ + +    KG   +V+ FTSLI    +   L EA  L D M     +P  
Sbjct: 924  GKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSV 983

Query: 515  VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            VTY  +ID L + G+V EA  +  +M  KG +P  +T
Sbjct: 984  VTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGIT 1020



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 146/587 (24%), Positives = 260/587 (44%), Gaps = 55/587 (9%)

Query: 140 DPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           DP V  + ++++ L K+     A +    M  + + C P   +Y  L+   ++AG+L  A
Sbjct: 319 DPGVHTFTVLIDALVKSGNIDEACKFFNGM--KNLRCSPNVVTYTTLVNGLAKAGRLEEA 376

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             V   M++   +P+ +  NT I  L    +   A    + M+  G+ PN+ TYN +I  
Sbjct: 377 CEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISV 436

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN------ 309
                R  +A +L  ++  +G  PD  +Y T++  L K  ++ +V  ++++MV       
Sbjct: 437 LGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECI 496

Query: 310 ---DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
              DSN  H +G IE A   V   S        +TY  +++ F   G +D+A K+L+ M 
Sbjct: 497 ISRDSNAGH-EGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMK 555

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
            H C P  V+YT  ++GL   G+  EA  ++   E++   P+ +TYS +M    +  +  
Sbjct: 556 KHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEE 615

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCR----------------EG------------ 458
           E+  +  EMV+KG        +L+I  LC+                EG            
Sbjct: 616 ESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLL 675

Query: 459 -------KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
                  K+D A +   E        +   +  ++ G  +   ++EA  L+D M      
Sbjct: 676 SSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNIL 735

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD  TYT+++D L K+GR+EEA  +  KM  +G  P VV Y +++    + G++   L +
Sbjct: 736 PDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALII 795

Query: 572 LEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
              M +K++C      Y+ +I++L   G +EEA       +      +      L++S+ 
Sbjct: 796 FRAM-AKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFG 854

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
            KG+   A ++   M  R   P++     +   L   G+   A+ L+
Sbjct: 855 KKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLL 901



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 179/347 (51%), Gaps = 19/347 (5%)

Query: 120  DERV--ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
            DE++  ALQ F    ++     D  VY +M+  L K+     A +++  M  + I   P+
Sbjct: 681  DEKIDFALQIFNEL-QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNI--LPD 737

Query: 178  AFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
             F+Y  L+    ++G+L  A  + + M +    P+++   + + VL  G KL+ AL    
Sbjct: 738  LFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFR 797

Query: 236  RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
             M      P+V+TY+ LI       R+++A    +    KGC+P+   Y +++    K+ 
Sbjct: 798  AMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKG 857

Query: 296  RIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYT 343
             +    +L E+M         V  +NL       GR+  A++L+ +M ++GC+PD+VTY 
Sbjct: 858  MVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYN 917

Query: 344  AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
             +++G  ++G +D+A+   ++M   G  P+ +++T+ +  L    K LEA E+ ++ EEE
Sbjct: 918  ILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEE 977

Query: 404  WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             + P+ +TY+V++  L R GK+ EA  +  EM  KG  P  + I ++
Sbjct: 978  GYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/291 (19%), Positives = 126/291 (43%), Gaps = 8/291 (2%)

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
             +++ ++    TY++++  L    +      ++  M K+G   +   +  L+++     
Sbjct: 172 AGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTN 231

Query: 459 KMDGAKKFMQECLNKGC--AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            + GA +   +  + GC  + N+ NF  ++    + G    A+ +   +   +  PD  T
Sbjct: 232 NVSGALEIFNQMKSFGCNPSTNMYNF--VLELLVKGGFYHSAVIVFGKLGQFRIQPDAQT 289

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           +   + + +++GR++ A E + +M+  G+ P V T+  +I    + G +++  K    M 
Sbjct: 290 FRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGM- 348

Query: 577 SKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
              +C      Y  ++  L   G LEEA ++  ++       DA   + L++     G  
Sbjct: 349 KNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEA 408

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
            +A  +   M +R L+P+L+    +   L   G+  EA  L     E+G +
Sbjct: 409 DMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAV 459


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 254/522 (48%), Gaps = 15/522 (2%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           +M  + + G +  A     +M K  +  +    N  +H L V   + +AL F + M+  G
Sbjct: 277 IMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHG 336

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + P+V+TYN L KG+  L  +  A K++ +M L+G +PD V+Y T++   C+   I+E  
Sbjct: 337 VEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEAL 396

Query: 302 DLMEKMVND----SNLFHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            L ++ ++     + +F++         GRIEEA  L ++M  +   PD + Y+ +++G 
Sbjct: 397 KLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGL 456

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G + +A ++ +QM      P+  +  A L GL  NG   EAR   +T        + 
Sbjct: 457 CKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDV 516

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           + Y++++ G  R   ++EA  +  +M+++G  P+ V  N LI   CR G +  A+K ++ 
Sbjct: 517 VLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEV 576

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              KG   +VV +T+L+  +C+ G+++E    L +M      P  VTYT +I  L +  +
Sbjct: 577 IRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNK 636

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQ 587
           + E+ +L+  M +KGL+P  VTY T+I  +C+   +   L+L   ML       +  Y  
Sbjct: 637 MHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKV 696

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I  LC FG L++  +++  +          T   +++++  KG    A     +M  + 
Sbjct: 697 LINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKG 756

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
            +  ++    V  RL   G   EA    +  +  G + P  E
Sbjct: 757 FVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEG-VTPDPE 797



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 151/668 (22%), Positives = 282/668 (42%), Gaps = 86/668 (12%)

Query: 82  CRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDP 141
           C    + S  S  +   + + LR+LKP              VA+ FFY+   ++ +RH  
Sbjct: 71  CNFRTVVSTLSETVVDGVLDRLRTLKPD-------------VAVAFFYFLINEYGFRHSI 117

Query: 142 IVYYMMLEILS-KTKLCQGAKRVLRLMARRGI-----------------ECRPEAFSYLM 183
              +++  IL+ K +  +    +  L+  +G+                 +     +  L 
Sbjct: 118 FSQFVVSHILAGKGRFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLA 177

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
            AYSR   + +A++V++ M+      ++   N+ +H +   + +         ++++G  
Sbjct: 178 FAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVY---NEIKVSGAP 234

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
            +  T + LI G C+  +++DAI  + +   K   P  VS  T+M   CK   I   R  
Sbjct: 235 QSECTTSILIHGLCEQSKLEDAISFLHDSN-KVVGPSIVSINTIMSKFCKVGLIDVARSF 293

Query: 304 MEKMVNDSNLFHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
              MV +  L HD              G ++EA    + M + G  PDVVTY  +  GF 
Sbjct: 294 FCLMVKNG-LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFL 352

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG--------------------------- 383
            +G +  A+K++Q+M   G  P+ V+YT  + G                           
Sbjct: 353 LLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVI 412

Query: 384 --------LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
                   LC  G+  EA  + +  E     P+ I YS+++HGL +EG +  A  +  +M
Sbjct: 413 FYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM 472

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
             K  FP       ++  L + G +  A+ +           +VV +  +I G+ +   +
Sbjct: 473 RLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGI 532

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            EA+ L   M      P  VT+ T+I+   + G + EA +++  +  KGLVP+VVTY T+
Sbjct: 533 AEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTL 592

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           ++ YC+VG ++++   L +M +     T   Y  +I+ LC    + E+ ++L  +     
Sbjct: 593 MNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGL 652

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             D+ T + +++ +        A ++   M   N  P     K +   L + G  ++ D 
Sbjct: 653 LPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDR 712

Query: 674 LMLRFVER 681
           +++   +R
Sbjct: 713 MVVSIEDR 720



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/436 (22%), Positives = 195/436 (44%), Gaps = 23/436 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           ++ + I Y M+L  L K    + A  +   M    +E     +S L+    + G ++ A 
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   M+     P+       +  L     +++A  + +      +  +V+ YN +I GY
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGY 526

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
             L  I +A++L  +M  +G +P  V++ T++   C+                       
Sbjct: 527 VRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCR----------------------- 563

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G + EA++++  +   G +P VVTYT ++N +C VG + +    L +M  +   P  V+
Sbjct: 564 RGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVT 623

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YT  + GLC   K  E+ +++     +   P+++TY+ ++    +  ++++A  +   M+
Sbjct: 624 YTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMML 683

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
                PT V   +LI +LC  G +    + +    ++   +  V + ++I+  C KG + 
Sbjct: 684 LHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVS 743

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +AL   + M           Y+ +I+ L K G + EA    + MLS+G+ P     +TV+
Sbjct: 744 KALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVL 803

Query: 557 HRYCQVGRVEDLLKLL 572
           + + Q G    + + L
Sbjct: 804 NAFHQQGNNSSVFEFL 819



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 182/381 (47%), Gaps = 16/381 (4%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS--YLMVAYSRAGKLR 193
           R   D IVY +++  L K    Q A ++   M  R     P  F+   +++   + G + 
Sbjct: 441 RLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM--RLKRKFPHHFAQRAVLLGLFKNGNIS 498

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A        +  +  ++++ N  I   V  + +A+A++   +M   GITP+V+T+N LI
Sbjct: 499 EARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLI 558

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VN 309
            G+C    + +A K+++ + LKG  P  V+Y T+M   C+   ++E+   + +M    V 
Sbjct: 559 NGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVV 618

Query: 310 DSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
            +++ +         Q ++ E+ +L+  M   G +PD VTY  ++  FC+  E+ +A ++
Sbjct: 619 PTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQL 678

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
              M  H C P  V+Y   +N LC  G   +   M+ + E+   T   +TY  ++     
Sbjct: 679 YNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCA 738

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           +G++S+A     +M+ KGF  +  + + +I  LC+ G +  AK F    L++G   +   
Sbjct: 739 KGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEI 798

Query: 482 FTSLIRGFCQKGDLEEALSLL 502
             +++  F Q+G+       L
Sbjct: 799 CKTVLNAFHQQGNNSSVFEFL 819



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 22/318 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D ++Y +M++   +      A ++   M  RGI      F+ L+  + R G L  A  +L
Sbjct: 515 DVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKML 574

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +++   + P+++   T ++       + +   FL  M+   + P  +TY  LIKG C  
Sbjct: 575 EVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQ 634

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           +++ ++++L++ M  KG  PD V+Y T++   CK K I +   L   M     L H+   
Sbjct: 635 NKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMM-----LLHNCDP 689

Query: 320 IEEA-KELVNQMSQMGCIPDV----------------VTYTAVVNGFCRVGELDQAKKML 362
            +   K L+N +   G + DV                VTY  ++   C  G++ +A    
Sbjct: 690 TQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYF 749

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            QM   G   +   Y+A +N LC  G   EA+        E  TP+      V++   ++
Sbjct: 750 NQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQ 809

Query: 423 GKLSEACDVVREMVKKGF 440
           G  S   + +  +VK GF
Sbjct: 810 GNNSSVFEFLAMVVKSGF 827


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 227/469 (48%), Gaps = 25/469 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  +G+    E  + L+  + +  +   A  + + M +  +  ++   N  I+VL    K
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L KA  F+  M+ +G+ PN++TYN ++ GYC   R++ A  ++  M  +   PD  +Y +
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  +CK                       QGR+EEA ++  +M Q G  P  V Y  ++
Sbjct: 297 LISGMCK-----------------------QGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +GFC  G LD A     +M   G  P   +Y + ++ L    ++ EA  MI   +E+  +
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+AITY+++++G  R     +A  +  EM+  G  PT      L+  L ++ +M  A   
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            ++  ++G   + + F +LI G C   +++ A  LL DM   K  PD VT+ TI+    +
Sbjct: 454 FKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--A 584
            G+VEEA EL  +M  +G+ P  +++ T+I  Y + G ++D  ++  +ML      T   
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           YN +++ LC     + A ++L +++      D +T   L+E      IP
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIP 622



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 212/428 (49%), Gaps = 12/428 (2%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L +  K    + A  +   M R  I+     F+ ++    + GKL+ A   +  M+ + 
Sbjct: 192 LLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSG 251

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           V PN++  NT +H      ++  A   L  M+   I P+  TY  LI G C   R+++A 
Sbjct: 252 VKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEAS 311

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI---KEVRDLMEK------MVNDSNLFHD- 316
           K+ +EM  KG  P  V Y T++   C +  +      +D M K      M   ++L H  
Sbjct: 312 KIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHAL 371

Query: 317 --QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             + R +EA+ ++ ++ + G  PD +TY  ++NG+CR     +A  +  +M   G KP  
Sbjct: 372 FMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTK 431

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +YT+ L+ L    +  EA ++      E   P+AI ++ ++ G      +  A +++++
Sbjct: 432 KTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKD 491

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M +    P  V  N ++Q  CREGK++ A++   E   +G   + ++F +LI G+ ++GD
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGD 551

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           +++A  + ++M     +P  +TY  ++  L KN   + A EL+ +M+SKG+ P   TY T
Sbjct: 552 IKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFT 611

Query: 555 VIHRYCQV 562
           +I    +V
Sbjct: 612 LIEGIAKV 619



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 221/450 (49%), Gaps = 14/450 (3%)

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           + ++ LIK  CD++R  +A +    M  KG  P   +  +++    K  R +    L  +
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 307 M----VNDS--------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
           M    +  S        N+   +G++++AK+ V  M   G  P++VTY  +V+G+C  G 
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           ++ A  +L  M     +P++ +Y + ++G+C  G+  EA ++     ++   P+A+ Y+ 
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ G   +G L  A     EM+KKG  PT    N LI +L  E + D A+  ++E   KG
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
            + + + +  LI G+C+  + ++A  L D+M      P   TYT+++  LSK  R++EA 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENL 592
           +L  K+ S+G++P  + +  +I  +C    V+   +LL+ M  +        +N +++  
Sbjct: 452 DLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G +EEA ++  ++ R   K D  + + L+  Y  +G    A++V   M +    P +
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTV 571

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
                + + L    + + A+ L+   V +G
Sbjct: 572 LTYNALVQGLCKNQEGDLAEELLKEMVSKG 601



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 174/361 (48%), Gaps = 27/361 (7%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           ++ +   D   Y  ++  + K    + A ++   M ++G+  RP A  Y  L+  +   G
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGL--RPSAVIYNTLIDGFCNKG 340

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
            L  A      M K  ++P +   N+ IH L +  +  +A   ++ +Q  GI+P+ +TYN
Sbjct: 341 NLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYN 400

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI GYC     K A  L DEM   G  P K +Y +++  L K+ R+KE  DL +K+ ++
Sbjct: 401 ILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                                  G +PD + + A+++G C    +  A ++L+ M     
Sbjct: 461 -----------------------GVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKV 497

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            P+ V++   + G C  GK  EARE+ +  +     P+ I+++ ++ G  R G + +A  
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           V  EM+  GF PT +  N L+Q LC+  + D A++ ++E ++KG   +   + +LI G  
Sbjct: 558 VRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617

Query: 491 Q 491
           +
Sbjct: 618 K 618



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 145/312 (46%), Gaps = 2/312 (0%)

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           +++ +   +   C   ++ EA E   T +E+   P   T + ++    +  +   A  + 
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            EM +     +    N++I  LC+EGK+  AK F+      G   N+V + +++ G+C  
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G +E A ++L  M   K +PD+ TY ++I  + K GR+EEA+++  +M+ KGL P+ V Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
            T+I  +C  G ++      ++ML K      + YN +I  L      +EA  ++ ++  
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                DA T ++L+  Y        A+ +   M    + P  K    +   L  + + +E
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 671 ADTLMLRFVERG 682
           AD L  +    G
Sbjct: 450 ADDLFKKITSEG 461



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 2/237 (0%)

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           E  E +  S +     ++I +  ++       +  EA +    M +KG  PT    N L+
Sbjct: 134 EIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLL 193

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
               +  + + A     E        +V  F  +I   C++G L++A   +  M      
Sbjct: 194 SLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVK 253

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P+ VTY TI+     +GRVE A  ++  M  + + P   TY ++I   C+ GR+E+  K+
Sbjct: 254 PNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKI 313

Query: 572 LEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            E+M+ K  +     YN +I+  C+ G L+ A     ++L+       ST + L+ +
Sbjct: 314 FEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA 370



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 111/235 (47%), Gaps = 18/235 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRL---MARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           D I Y +++    +   C  AK+   L   M   GI+   + ++ L+   S+  +++ A 
Sbjct: 395 DAITYNILINGYCR---CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   +    V P+ ++ N  I      + +  A   L+ M    + P+ +T+N +++G+
Sbjct: 452 DLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMVNDSN 312
           C   ++++A +L DEM  +G  PD +S+ T++    +   IK+      ++++   N + 
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTV 571

Query: 313 LFHD---QGRIEE-----AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
           L ++   QG  +      A+EL+ +M   G  PD  TY  ++ G  +V   D+ K
Sbjct: 572 LTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 260/561 (46%), Gaps = 53/561 (9%)

Query: 176 PEAFSY-LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
           P+ FSY L+  + + G++  A  +   M +  V P +LICN+ I  L    ++ KA   +
Sbjct: 133 PDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIV 192

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCK 293
           ++M  +GI P++ TY+ +I G C    +  A +++++M   G  P+ ++Y +++ GY   
Sbjct: 193 QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSIS 252

Query: 294 EKRIKEVRDLME-------KMVNDSNLF----HDQGRIEEAKELVNQMSQMGCIPDVVTY 342
               + VR   +         V++ N F       GR  EAK + + M   G  PD+++Y
Sbjct: 253 GMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISY 312

Query: 343 TA-------------------------------------VVNGFCRVGELDQAKKMLQQM 365
           +                                      ++N + R G +D+A  + + M
Sbjct: 313 STMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 372

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
            + G  P+TV++   ++ LC  G+  +A    N   +    P+   Y  ++ G    G+L
Sbjct: 373 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGEL 432

Query: 426 SEACDVVREMVKKGFFPTPVE-INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
            +A +++ EM+ K   P  V+  + +I +LC+EG++   K  M   +  G   NVV F S
Sbjct: 433 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 492

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L+ G+C  G++EEA +LLD M     +P+   Y T++D   KNGR+++A  +   ML KG
Sbjct: 493 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 552

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAG 602
           + PT V Y  ++H   Q  R     K+  +M+      +   Y  V+  LC     +EA 
Sbjct: 553 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 612

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
            +L K+     K D  T ++++ +    G    A ++   +    L+P+++    +   L
Sbjct: 613 MLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 672

Query: 663 ILEGKSEEADTLMLRFVERGH 683
           I E   EEAD L +   + GH
Sbjct: 673 IKEESYEEADNLFISVEKSGH 693



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 135/548 (24%), Positives = 244/548 (44%), Gaps = 58/548 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y ++++ L K+K    A+RVL  M   G   RP + +Y  L+  YS +G    ++ 
Sbjct: 203 DLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG--TRPNSITYNSLIHGYSISGMWNESVR 260

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   M    V P +  CN+ IH L    +  +A    + M L G  P++++Y+ ++ GY 
Sbjct: 261 VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYA 320

Query: 258 --------DLHRIKD-----------------------------AIKLIDEMPLKGCSPD 280
                   D+H I +                             A+ + ++M  KG  PD
Sbjct: 321 TATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 380

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVN----DSNLFH--------DQGRIEEAKELVN 328
            V++ TV+  LC+  R+ +       MV+     S   +        + G + +AKEL++
Sbjct: 381 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 440

Query: 329 QMSQMGCIPDVVTY-TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           +M      P  V Y ++++N  C+ G + + K ++  M   G +PN V++ + + G C  
Sbjct: 441 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 500

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G   EA  +++        PN   Y  ++ G  + G++ +A  V R+M+ KG  PT V  
Sbjct: 501 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 560

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           ++++  L +  +   AKK   E +  G  V++  +  ++ G C+    +EA  LL+ ++ 
Sbjct: 561 SIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 620

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE- 566
                D +T+  +I A+ K GR +EA EL   + + GLVP + TY  +I    +    E 
Sbjct: 621 MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 680

Query: 567 --DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
             +L   +EK       R   N ++  L +   + +A   L  +       +AST  +L 
Sbjct: 681 ADNLFISVEKSGHASDSRL-LNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLA 739

Query: 625 ESYLNKGI 632
             +  +G+
Sbjct: 740 SLFSREGM 747



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/485 (22%), Positives = 222/485 (45%), Gaps = 65/485 (13%)

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P + TYN LI  Y  +HR    + ++  +   G  PD  SY  + G+         V+D 
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGF---------VKD- 147

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                         G +++A  L  +M + G +P ++   +++   C++ E+D+A+ ++Q
Sbjct: 148 --------------GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQ 193

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   G  P+  +Y+  ++GLC +    +A  ++    E    PN+ITY+ ++HG    G
Sbjct: 194 KMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISG 253

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
             +E+  V ++M   G  PT    N  I +L + G+ + AK      + KG   ++++++
Sbjct: 254 MWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYS 313

Query: 484 SLIRGFCQKGD--LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +++ G+    D  L +  ++ + M      P+   +  +I+A ++ G +++A  +   M 
Sbjct: 314 TMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQ 373

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLL-------------------------------- 569
           +KG++P  VT+ TVI   C++GR++D L                                
Sbjct: 374 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELV 433

Query: 570 ---KLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
              +L+ +M++K         ++ +I NLC  G + E   I+  +++T  + +  T + L
Sbjct: 434 KAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSL 493

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +E Y   G    A+ +   M +  + P+  +   + +     G+ ++A T+    + +G 
Sbjct: 494 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG- 552

Query: 684 IQPKS 688
           ++P S
Sbjct: 553 VKPTS 557



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 129/296 (43%), Gaps = 12/296 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS ++    + G++     ++ MM +    PN++  N+ +    +   + +A   L+ M 
Sbjct: 455 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 514

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             GI PN   Y  L+ GYC   RI DA+ +  +M  KG  P  V Y  ++  L + +R  
Sbjct: 515 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTT 574

Query: 299 EVRDLMEKMVNDSNL--FHDQGRI----------EEAKELVNQMSQMGCIPDVVTYTAVV 346
             + +  +M+        H  G +          +EA  L+ ++  M    D++T+  V+
Sbjct: 575 AAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 634

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +   +VG   +AK++   +  +G  PN  +Y+  +  L       EA  +  + E+    
Sbjct: 635 SAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHA 694

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
            ++   + ++  L  + ++++A + +  + +         I+LL     REG + G
Sbjct: 695 SDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIKG 750


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 254/522 (48%), Gaps = 15/522 (2%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           +M  + + G +  A     +M K  +  +    N  +H L V   + +AL F + M+  G
Sbjct: 277 IMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHG 336

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + P+V+TYN L KG+  L  +  A K++ +M L+G +PD V+Y T++   C+   I+E  
Sbjct: 337 VEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEAL 396

Query: 302 DLMEKMVND----SNLFHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            L ++ ++     + +F++         GRIEEA  L ++M  +   PD + Y+ +++G 
Sbjct: 397 KLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGL 456

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G + +A ++ +QM      P+  +  A L GL  NG   EAR   +T        + 
Sbjct: 457 CKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDV 516

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           + Y++++ G  R   ++EA  +  +M+++G  P+ V  N LI   CR G +  A+K ++ 
Sbjct: 517 VLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEV 576

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              KG   +VV +T+L+  +C+ G+++E    L +M      P  VTYT +I  L +  +
Sbjct: 577 IRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNK 636

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQ 587
           + E+ +L+  M +KGL+P  VTY T+I  +C+   +   L+L   ML       +  Y  
Sbjct: 637 MHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKV 696

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I  LC FG L++  +++  +          T   +++++  KG    A     +M  + 
Sbjct: 697 LINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKG 756

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
            +  ++    V  RL   G   EA    +  +  G + P  E
Sbjct: 757 FVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEG-VTPDPE 797



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 151/668 (22%), Positives = 282/668 (42%), Gaps = 86/668 (12%)

Query: 82  CRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDP 141
           C    + S  S  +   + + LR+LKP              VA+ FFY+   ++ +RH  
Sbjct: 71  CNFRTVVSTLSETVVDGVLDRLRTLKPD-------------VAVAFFYFLINEYGFRHSI 117

Query: 142 IVYYMMLEILS-KTKLCQGAKRVLRLMARRGI-----------------ECRPEAFSYLM 183
              +++  IL+ K +  +    +  L+  +G+                 +     +  L 
Sbjct: 118 FSQFVVSHILAGKGRFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLA 177

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
            AYSR   + +A++V++ M+      ++   N+ +H +   + +         ++++G  
Sbjct: 178 FAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVY---NEIKVSGAP 234

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
            +  T + LI G C+  +++DAI  + +   K   P  VS  T+M   CK   I   R  
Sbjct: 235 QSECTTSILIHGLCEQSKLEDAISFLHDSN-KVVGPSIVSINTIMSKFCKVGLIDVARSX 293

Query: 304 MEKMVNDSNLFHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
              MV +  L HD              G ++EA    + M + G  PDVVTY  +  GF 
Sbjct: 294 FCLMVKNG-LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFL 352

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG--------------------------- 383
            +G +  A+K++Q+M   G  P+ V+YT  + G                           
Sbjct: 353 LLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVI 412

Query: 384 --------LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
                   LC  G+  EA  + +  E     P+ I YS+++HGL +EG +  A  +  +M
Sbjct: 413 FYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM 472

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
             K  FP       ++  L + G +  A+ +           +VV +  +I G+ +   +
Sbjct: 473 RLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGI 532

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            EA+ L   M      P  VT+ T+I+   + G + EA +++  +  KGLVP+VVTY T+
Sbjct: 533 AEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTL 592

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           ++ YC+VG ++++   L +M +     T   Y  +I+ LC    + E+ ++L  +     
Sbjct: 593 MNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGL 652

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             D+ T + +++ +        A ++   M   N  P     K +   L + G  ++ D 
Sbjct: 653 LPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDR 712

Query: 674 LMLRFVER 681
           +++   +R
Sbjct: 713 MVVSIEDR 720



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/436 (21%), Positives = 194/436 (44%), Gaps = 23/436 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           ++ + I Y M+L  L K    + A  +   M    +E     +S L+    + G ++ A 
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   M+     P+       +  L     +++A  + +      +  +V+ YN +I GY
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGY 526

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
             L  I +A++L  +M  +G +P  V++ T++   C+                       
Sbjct: 527 VRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCR----------------------- 563

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G + EA++++  +   G +P VVTYT ++N +C VG + +    L +M  +   P  V+
Sbjct: 564 RGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVT 623

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YT  + GLC   K  E+ +++     +   P+++TY+ ++    +  ++++A  +   M+
Sbjct: 624 YTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMML 683

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
                PT V   +LI +LC  G +    + +    ++   +    + ++I+  C KG + 
Sbjct: 684 LHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVS 743

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +AL   + M           Y+ +I+ L K G + EA    + MLS+G+ P     +TV+
Sbjct: 744 KALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVL 803

Query: 557 HRYCQVGRVEDLLKLL 572
           + + Q G    + + L
Sbjct: 804 NAFHQQGNNSSVFEFL 819



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 181/381 (47%), Gaps = 16/381 (4%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS--YLMVAYSRAGKLR 193
           R   D IVY +++  L K    Q A ++   M  +     P  F+   +++   + G + 
Sbjct: 441 RLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLK--RKFPHHFAQRAVLLGLFKNGNIS 498

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A        +  +  ++++ N  I   V  + +A+A++   +M   GITP+V+T+N LI
Sbjct: 499 EARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLI 558

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VN 309
            G+C    + +A K+++ + LKG  P  V+Y T+M   C+   ++E+   + +M    V 
Sbjct: 559 NGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVV 618

Query: 310 DSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
            +++ +         Q ++ E+ +L+  M   G +PD VTY  ++  FC+  E+ +A ++
Sbjct: 619 PTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQL 678

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
              M  H C P  V+Y   +N LC  G   +   M+ + E+   T    TY  ++     
Sbjct: 679 YNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCA 738

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           +G++S+A     +M+ KGF  +  + + +I  LC+ G +  AK F    L++G   +   
Sbjct: 739 KGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEI 798

Query: 482 FTSLIRGFCQKGDLEEALSLL 502
             +++  F Q+G+       L
Sbjct: 799 CKTVLNAFHQQGNNSSVFEFL 819



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 138/318 (43%), Gaps = 22/318 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D ++Y +M++   +      A ++   M  RGI      F+ L+  + R G L  A  +L
Sbjct: 515 DVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKML 574

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +++   + P+++   T ++       + +   FL  M+   + P  +TY  LIKG C  
Sbjct: 575 EVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQ 634

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           +++ ++++L++ M  KG  PD V+Y T++   CK K I +   L   M     L H+   
Sbjct: 635 NKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMM-----LLHNCDP 689

Query: 320 IEEA-KELVNQMSQMGCIPDV----------------VTYTAVVNGFCRVGELDQAKKML 362
            +   K L+N +   G + DV                 TY  ++   C  G++ +A    
Sbjct: 690 TQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYF 749

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            QM   G   +   Y+A +N LC  G   EA+        E  TP+      V++   ++
Sbjct: 750 NQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQ 809

Query: 423 GKLSEACDVVREMVKKGF 440
           G  S   + +  +VK GF
Sbjct: 810 GNNSSVFEFLAMVVKSGF 827


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 155/588 (26%), Positives = 269/588 (45%), Gaps = 62/588 (10%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D   Y  ++  L K +  +  + ++  M   G      A S L+    + G + +A  
Sbjct: 282 RADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFD 341

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +++ ++K  VAP+L + N  I+ +    KL +A      M   G+ PN +TY+ LI  +C
Sbjct: 342 LVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFC 401

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              ++  A+  + +M   G       Y +++   CK                        
Sbjct: 402 KRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCK-----------------------L 438

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G++  AK L ++M   G  P+VV YT++++G+C+ GEL  A ++  +M   G  PNT ++
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTF 498

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           TA ++GLCH  +  EA ++     E    PN +TY+V++ G  +EG    A +++ EMV+
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE 558

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P       LI  LC  G++  A++FM +   +   +N + F++L+ G+C++G L++
Sbjct: 559 KGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDD 618

Query: 498 ALS-----------------------------------LLDDMYLCKKDPDTVTYTTIID 522
           AL                                    LL  M+     PD V YTT+ID
Sbjct: 619 ALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMID 678

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC- 581
           A +K G ++ A  L   M+S+G +P VVTY  +I+  C++G ++    L  +ML+     
Sbjct: 679 ANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLP 738

Query: 582 -RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
            +  Y   ++ L S G +E+A + L  VL     A+  T ++L+  +   G    A +V 
Sbjct: 739 NQNTYACFLDYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVL 797

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
             M +  + PD      +       G  +EA  L    + RG + P +
Sbjct: 798 VNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG-VNPDT 844



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 214/453 (47%), Gaps = 14/453 (3%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           V+RLM   GI  +    S ++    R  + R A+++   +  + + P++ +    +  L 
Sbjct: 167 VVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLC 226

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
                 +A   + RM+ +G   +V TYN  I+G C   R+ +A+++ + +  KG   D  
Sbjct: 227 ELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVG 286

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVN---------DSNL---FHDQGRIEEAKELVNQM 330
           +Y T++  LCK +  +   ++M +M+           SNL      +G I  A +LVN++
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV 346

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            + G  P +  Y A++N  C+ G+LD+A+ +   M H G  PN V+Y+  ++  C  GK 
Sbjct: 347 KKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKL 406

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             A   +    E         YS ++ G  + GKL  A  +  EM+  G  P  V    L
Sbjct: 407 DVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL 466

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I   C+EG++  A +   E   KG + N   FT+LI G C    + EA  L  +M     
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV 526

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P+ VTY  +I+   K G    A EL+ +M+ KGLVP   TYR +I   C  GRV +  +
Sbjct: 527 IPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEARE 586

Query: 571 LLEKMLSKQK--CRTAYNQVIENLCSFGYLEEA 601
            +  +  +Q+      ++ ++   C  G L++A
Sbjct: 587 FMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDA 619



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 216/450 (48%), Gaps = 15/450 (3%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           + AK +   M   G++     ++ L+  Y + G+L NA  +   M    ++PN       
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTAL 501

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I  L   N++A+A +    M    + PN +TYN LI+G+C       A +L+DEM  KG 
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKE 325
            PD  +Y  ++  LC   R+ E R+ M  +  +         S L H    +GR+++A +
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALD 621

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
              +M   G   D+V Y+ ++ G  R  +      +L+QM+  G +P+ V YT  ++   
Sbjct: 622 ACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANA 681

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G    A  + +    E   PN +TY+ +++GL + G + +A  + REM+     P   
Sbjct: 682 KAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQN 741

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
                +  L  EG ++ A + + + L +G   N V +  LIRGFC+ G ++EA  +L +M
Sbjct: 742 TYACFLDYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNM 800

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 PD ++Y+TII    + G ++EA +L   ML++G+ P  V Y  +I+  C  G +
Sbjct: 801 IDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGEL 860

Query: 566 EDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
               +L + M+ +  +  R  YN +I   C
Sbjct: 861 TKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 149/599 (24%), Positives = 269/599 (44%), Gaps = 42/599 (7%)

Query: 90  AWSPKLEGELRNLLRSLKPRQICAVL-RSQADERVALQFFYWADRQWRYRHDPIVYYMML 148
           +W   L      + ++LKP  +  VL ++  D R+AL+FF +      + H    + +++
Sbjct: 43  SWRVALNNSF--ISQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILI 100

Query: 149 EILSKTKLCQGAKRVLRLMARRGIECRPEA-------------------FSYLMVAYSRA 189
             L ++ L   A  +L+ +  RG+   PE                    F  L+  Y + 
Sbjct: 101 HALVQSNLYWPASSLLQTLLLRGLN--PEGLFESFLDSYRKCNFSTTLGFDLLIQTYVQN 158

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
            +  + + V+ +M    + P +   +  ++ L+   +   AL   + +  +G+ P+V  Y
Sbjct: 159 RRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVY 218

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             +++  C+L     A ++I  M   GC     +Y   +  LCK +R+ E  ++ + +++
Sbjct: 219 TAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEI-KNLLS 277

Query: 310 DSNLFHDQG-------------RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
              L  D G               E  +E++N+M + G +P     + +V+G  + G + 
Sbjct: 278 YKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIG 337

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
            A  ++ ++   G  P+   Y A +N +C +GK  EA  + N    +   PN +TYS+++
Sbjct: 338 SAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILI 397

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
               + GKL  A   + +M + G   T    + LI   C+ GK+  AK    E +  G  
Sbjct: 398 DSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLK 457

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            NVV +TSLI G+C++G+L  A  L  +M      P+T T+T +I  L    R+ EA +L
Sbjct: 458 PNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN--QVIENLCS 594
             +M+   ++P  VTY  +I  +C+ G      +LL++M+ K      Y    +I  LCS
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR-MFNRNLIPDL 652
            G + EA + +  +     K +      L+  Y  +G    A   ACR M  R +  DL
Sbjct: 578 TGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALD-ACREMLGRGVAMDL 635



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 241/519 (46%), Gaps = 36/519 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y ++++   K      A   L  M   GI+     +S L+  + + GKLR A  + 
Sbjct: 389 NDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLF 448

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    + PN++I  + I       +L  A R    M   GI+PN  T+  LI G C  
Sbjct: 449 DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHA 508

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           +R+ +A KL  EM      P++V+Y  ++   CKE                       G 
Sbjct: 509 NRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE-----------------------GN 545

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
              A EL+++M + G +PD  TY  +++G C  G + +A++ +  +     K N + ++A
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSA 605

Query: 380 FLNGLCHNGK---SLEA-REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            L+G C  G+   +L+A REM+          + + YSV+++G+ R+       D++++M
Sbjct: 606 LLHGYCKEGRLDDALDACREMLGRGV----AMDLVCYSVLIYGILRQQDRRSIIDLLKQM 661

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
             +G  P  V    +I +  + G +  A       +++GC  NVV +T+LI G C+ G +
Sbjct: 662 HDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLM 721

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           ++A  L  +M      P+  TY   +D L+  G +E+A +L   +L +G +   VTY  +
Sbjct: 722 DKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNIL 780

Query: 556 IHRYCQVGRVEDLLKLLEKMLS---KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           I  +C++GR+++  ++L  M+       C  +Y+ +I   C  G L+EA K+   +L   
Sbjct: 781 IRGFCKLGRIQEAAEVLVNMIDSGISPDC-ISYSTIIYEYCRRGDLKEAIKLWESMLNRG 839

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              D    + L+      G    A+++   M  R + P+
Sbjct: 840 VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPN 878



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 179/367 (48%), Gaps = 12/367 (3%)

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A  L +++   G  PDV  YTAVV   C + +  +A++++ +M   GC  +  +Y  F+ 
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC N +  EA E+ N    +    +  TY  ++ GL +  +     +++ EM++ GF P
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVP 318

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
           +   ++ L+  L ++G +  A   + +    G A ++  + +LI   C+ G L+EA SL 
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF 378

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           ++M      P+ VTY+ +ID+  K G+++ A   + KM   G+  TV  Y ++I  +C++
Sbjct: 379 NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKL 438

Query: 563 GRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           G++     L ++M++   +     Y  +I   C  G L  A ++  ++       +  T 
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTF 498

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT-----LM 675
             L+    +      A K+   M   N+IP+     +V+  +++EG  +E +T     L+
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWNVIPN-----EVTYNVLIEGHCKEGNTVRAFELL 553

Query: 676 LRFVERG 682
              VE+G
Sbjct: 554 DEMVEKG 560



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 128/277 (46%), Gaps = 11/277 (3%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           R M  RG+      +S L+    R    R+ + +L  M    + P+ ++  T I      
Sbjct: 624 REMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKA 683

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             L  A    + M   G  PNV+TY  LI G C +  +  A  L  EM      P++ +Y
Sbjct: 684 GNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTY 743

Query: 285 YTVMGYLCKEKRIK---EVRD-LMEKMVNDS---NL----FHDQGRIEEAKELVNQMSQM 333
              + YL  E  I+   ++ D L+E  + ++   N+    F   GRI+EA E++  M   
Sbjct: 744 ACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDS 803

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  PD ++Y+ ++  +CR G+L +A K+ + M + G  P+TV+Y   + G C  G+  +A
Sbjct: 804 GISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKA 863

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            E+ +        PN  TY+ ++HG      +S   D
Sbjct: 864 FELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 900


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 252/515 (48%), Gaps = 15/515 (2%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           KL +A+ +   M ++   P+++  N  +  +   NK    +   ERMQ   I+ ++ +YN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--- 307
            LI  +C   ++  A+ ++ +M   G  PD V+  +++   C  KRI E   L+++M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 308 ------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                 V  + L H      +  EA  L+++M   GC PD+ TY  VVNG C+ G++D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L++M     + + V YT  ++ LC+     +A  +    + +   PN +TY+ ++  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L   G+ S+A  ++ +M+++   P  V  + LI +  +EGK+  A+K   E + +    +
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +  ++SLI GFC    L+EA  + + M      P+ VTY T+I    K  RVEE  EL  
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFG 596
           +M  +GLV   VTY T+I    Q G  +   K+ +KM+S         Y+ +++ LC +G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            LE+A  +   + ++  + D  T ++++E     G     + + C +  + + P++ +  
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
            +      +G  EEAD L     E G + P S  +
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTL-PNSGTY 573



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 243/506 (48%), Gaps = 14/506 (2%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +  R  +D   Y +++    +      A  VL  M + G E      S L+  Y    ++
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 166

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A+ ++  M      PN +  NT IH L + NK ++A+  ++RM   G  P++ TY  +
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 226

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS- 311
           + G C    I  A+ L+ +M       D V Y T++  LC  K + +  +L  +M N   
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286

Query: 312 -----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                          + GR  +A  L++ M +    P+VVT++A+++ F + G+L +A+K
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +  +M      P+  +Y++ +NG C + +  EA+ M      +   PN +TY+ ++ G  
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +  ++ E  ++ REM ++G     V  N LIQ L + G  D A+K  ++ ++ G   +++
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            ++ L+ G C+ G LE+AL + + +   K +PD  TY  +I+ + K G+VE+  +L   +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYL 598
             KG+ P V+ Y T+I  +C+ G  E+   L  +M        +  YN +I      G  
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586

Query: 599 EEAGKILGKVLRTASKADASTCHVLV 624
             + +++ ++       DAST  +++
Sbjct: 587 AASAELIKEMRSCGFVGDASTISMVI 612



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 212/417 (50%), Gaps = 23/417 (5%)

Query: 167 MARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           M  RG  C+P+ F+Y  V     + G +  A+ +L  M+K  +  +++I  T I  L   
Sbjct: 211 MVARG--CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 268

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             +  AL     M   GI PNV+TYN LI+  C+  R  DA +L+ +M  +  +P+ V++
Sbjct: 269 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 328

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVN---DSNLF-----------HDQGRIEEAKELVNQM 330
             ++    KE ++ E   L ++M+    D ++F           HD  R++EAK +   M
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD--RLDEAKHMFELM 386

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
               C P+VVTY  ++ GFC+   +++  ++ ++M   G   NTV+Y   + GL   G  
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             A+++      +   P+ ITYS+++ GL + GKL +A  V   + K    P     N++
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506

Query: 451 IQSLCREGKM-DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           I+ +C+ GK+ DG   F    L KG   NV+ +T++I GFC+KG  EEA +L  +M    
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSL-KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
             P++ TY T+I A  ++G    + EL+ +M S G V    T   VI+     GR+E
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLE 621



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 188/396 (47%), Gaps = 28/396 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D ++Y  +++ L   K    A  +   M  +GI  RP   +Y  L+      G+  +A  
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI--RPNVVTYNSLIRCLCNYGRWSDASR 311

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +LS M +  + PN++  +  I   V   KL +A +  + M    I P++ TY+ LI G+C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              R+ +A  + + M  K C P+ V+Y T++   CK KR+                    
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV-------------------- 411

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
              EE  EL  +MSQ G + + VTY  ++ G  + G+ D A+K+ ++M   G  P+ ++Y
Sbjct: 412 ---EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +  L+GLC  GK  +A  +    ++    P+  TY++++ G+ + GK+ +  D+   +  
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P  +    +I   CR+G  + A    +E    G   N   + +LIR   + GD   
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAA 588

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           +  L+ +M  C    D  T + +I+ L  +GR+E++
Sbjct: 589 SAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 248/536 (46%), Gaps = 76/536 (14%)

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           AGK   A  ++  M      P+    +  I  L   +K+ KA    E M+  GI P+V T
Sbjct: 431 AGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYT 490

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           Y  LI  +C    I+ A    DEM    C+P+ V+Y +++    K +++ +   L E M+
Sbjct: 491 YTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMML 550

Query: 309 NDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY-- 366
                      +E +K            P+VVTYTA+++G C+ G++D+A ++  +M   
Sbjct: 551 -----------LEGSK------------PNVVTYTALIDGHCKAGQIDKACQIYARMQGD 587

Query: 367 -------------HHGCK-PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
                         + C+ PN ++Y A ++GLC   +  EA E+++T       PN I Y
Sbjct: 588 IESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVY 647

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
             ++ G  + GKL  A +V  +M ++G+ P     + LI SL +E ++D   K + + L 
Sbjct: 648 DALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLE 707

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
             C  NVV +T +I G C+ G  EEA  L+  M      P+ +TYT +ID   K G++E+
Sbjct: 708 NSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQ 767

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----------------- 575
             EL   M SKG  P  +TYR +I+  C  G +++  +LL++M                 
Sbjct: 768 CLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIE 827

Query: 576 ---------------LSKQK---CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
                          LS+ +     + Y  +I+N    G LE A  +L ++  + S A A
Sbjct: 828 GFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVA 887

Query: 618 ST--CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           +      L+ES  +      A+++   M N+N++P+L     + + L   GK +EA
Sbjct: 888 NKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEA 943



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 161/683 (23%), Positives = 285/683 (41%), Gaps = 96/683 (14%)

Query: 85  IELRSAWSPKLEGELRNLLRSLKPRQ----ICAVLRSQADERVALQFFYWADRQWRYRHD 140
           + + +A       E +N LR  + R     +  V+         ++FF WA RQ  Y H 
Sbjct: 73  LSISNAIRTGFGAETQNFLRQFRGRLSEPLVVEVMNLVKHPEFCVEFFLWASRQIGYSHT 132

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE-------AFSYLMVAYSRAGKLR 193
           P+VY  ++E+     LC  A    R+  +  ++ R +         ++L+    R G   
Sbjct: 133 PVVYNALIEL-----LCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRNGMWN 187

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A+  L  ++      +    N  I V +  +KL  A      M  +G   +  T  C  
Sbjct: 188 VALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFA 247

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
              C   R  DA+ L+++       PD V Y  ++  LC+    +E  D++++M + S +
Sbjct: 248 YSLCKAGRCGDALSLLEKEEF---VPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCI 304

Query: 314 FH------------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
            +             +G++   K +++ M   GC P+   + ++V+ +C+  +   A K+
Sbjct: 305 PNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKL 364

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHN---------------------------------- 387
            ++M   GC+P  + Y  F+  +C N                                  
Sbjct: 365 FKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNF 424

Query: 388 -------GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
                  GK  +A E+I     + + P+  TYS V+  L    K+ +A  +  EM K G 
Sbjct: 425 ARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGI 484

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P+     +LI S C+ G +  A+ +  E L   C  NVV +TSLI  + +   + +A  
Sbjct: 485 VPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANK 544

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV-------------- 546
           L + M L    P+ VTYT +ID   K G++++A ++  +M  +G +              
Sbjct: 545 LFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARM--QGDIESSDIDMYFKLDDN 602

Query: 547 ----PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLE 599
               P ++TY  ++   C+  RVE+  +LL+ M S   C   +  Y+ +I+  C  G LE
Sbjct: 603 DCETPNIITYGALVDGLCKANRVEEAHELLDTM-SVNGCEPNQIVYDALIDGFCKTGKLE 661

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
            A ++  K+       +  T   L+ S   +    L  KV  +M   +  P++ +   + 
Sbjct: 662 NAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMI 721

Query: 660 ERLILEGKSEEADTLMLRFVERG 682
           + L   GK+EEA  LML+  E G
Sbjct: 722 DGLCKVGKTEEAYRLMLKMEEVG 744



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 231/502 (46%), Gaps = 69/502 (13%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++  L      + A  +   M + GI      ++ L+ ++ +AG ++ A    
Sbjct: 452 DDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWF 511

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +    PN++   + IH  +   K+  A +  E M L G  PNV+TY  LI G+C  
Sbjct: 512 DEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKA 571

Query: 260 HRIKDAIKLIDEMPL---------------KGC-SPDKVSYYTVMGYLCKEKRIKEVRDL 303
            +I  A ++   M                   C +P+ ++Y  ++  LCK  R++E  +L
Sbjct: 572 GQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHEL 631

Query: 304 MEKM----------VNDSNL--FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           ++ M          V D+ +  F   G++E A+E+  +MS+ G  P++ TY++++N   +
Sbjct: 632 LDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFK 691

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
              LD   K+L +M  + C PN V YT  ++GLC  GK+ EA  ++   EE    PN IT
Sbjct: 692 EKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVIT 751

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+ ++ G  + GK+ +  ++ R+M  KG  P  +   +LI   C  G +D A + + E  
Sbjct: 752 YTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMK 811

Query: 472 NKGCAVNVVNFTSLIRGF---------------------------------CQKGDLEEA 498
                 ++ ++  +I GF                                  + G LE A
Sbjct: 812 QTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGA 871

Query: 499 LSLLDDMYLCKKDPDTVT-----YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           L+LL+++      P         YT++I++LS   +V++A EL   M++K +VP + T+ 
Sbjct: 872 LNLLEEI---SSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFV 928

Query: 554 TVIHRYCQVGRVEDLLKLLEKM 575
            +I    +VG+ ++ L+L + +
Sbjct: 929 HLIKGLTRVGKWQEALQLSDSI 950



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 168/385 (43%), Gaps = 35/385 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  +++ L K    + A  +L  M+  G E     +  L+  + + GKL NA  V   
Sbjct: 610 ITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVK 669

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +    PNL   ++ I+ L    +L   L+ L +M     TPNV+ Y  +I G C + +
Sbjct: 670 MSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGK 729

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            ++A +L+ +M   GC P+ ++Y  ++                       + F   G+IE
Sbjct: 730 TEEAYRLMLKMEEVGCYPNVITYTAMI-----------------------DGFGKIGKIE 766

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +  EL   M   GC P+ +TY  ++N  C  G LD+A ++L +M       +  SY   +
Sbjct: 767 QCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKII 826

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
            G   N + + +  +++   E    P    Y +++    + G+L  A +++ E+      
Sbjct: 827 EGF--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSS--- 881

Query: 442 PTPVEIN-----LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           P+    N      LI+SL    K+D A +     +NK     +  F  LI+G  + G  +
Sbjct: 882 PSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQ 941

Query: 497 EALSLLDDM--YLCKKDPDTVTYTT 519
           EAL L D +   +C    + V Y T
Sbjct: 942 EALQLSDSICQMVCHVCSNFVNYKT 966


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 250/497 (50%), Gaps = 24/497 (4%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L +A  VL  + KAA A + +  NT +       +LA A R L    L+G   NV+TY 
Sbjct: 127 RLADAERVLDAL-KAAGAADPVSHNTLVAGYCRDGRLADAERLLAAAGLSGAA-NVVTYT 184

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI GYC   R+ DA+ LI  MP+   +PD  +Y TV+  LC  ++ ++   LM +MV +
Sbjct: 185 TLINGYCRSGRLADALALIASMPV---APDTYTYNTVLMGLCGARQWEDAEALMAEMVRN 241

Query: 311 S------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                          F   G ++ A +L+++M Q GC PDVV Y+ +VNGF   G +D A
Sbjct: 242 HCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDA 301

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            ++L  M    CKPNT+ Y A L GLC   +  +  ++I     +   PN  T+S++   
Sbjct: 302 IELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSC 358

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L + G +  A +V+ +M K G  P  V  N LI S   +G++D A K +    +  C+ +
Sbjct: 359 LCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLN---SMPCSPD 415

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           V++F + ++G C+    ++A  L+  M         +T+  +ID+L +NGRV  A E+  
Sbjct: 416 VISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFE 475

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYL 598
           +M   G  P +VTY ++I+   + G VE  ++L + M  K      YN V++ LC     
Sbjct: 476 QMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCKPDI-FGYNAVLKGLCRAARW 534

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           E+AG+++  + R     +  T ++L+ S   KG+   A +V  +M      PD+     +
Sbjct: 535 EDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNAL 594

Query: 659 SERLILEGKSEEADTLM 675
                 +G+ ++A  L+
Sbjct: 595 INGFSEQGRLDDARRLL 611



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 235/474 (49%), Gaps = 50/474 (10%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ L+  Y R+G+L +A+ +++ M    VAP+    NT +  L    +   A   +  M 
Sbjct: 183 YTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGARQWEDAEALMAEMV 239

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
                PN +T+   I+ +C    +  A++L+D MP  GC+PD V Y T++    ++ R+ 
Sbjct: 240 RNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVD 299

Query: 299 EVRDLMEKMVNDSNLFHDQG---------RIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
           +  +L+  M+   N               R E+  +L+ +M +  C+P+  T++ + +  
Sbjct: 300 DAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCL 359

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G +D A ++L+QM+ +GC+P+ V Y   +      G+  +A +++N+      +P+ 
Sbjct: 360 CQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP---CSPDV 416

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           I+++  + GL R  +  +A +++ +M+++      +  N+LI SLC+ G+++ A +  ++
Sbjct: 417 ISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQ 476

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD------------------ 511
               GC  ++V ++SLI G  ++G +E A+ L   M  CK D                  
Sbjct: 477 MPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP-CKPDIFGYNAVLKGLCRAARWE 535

Query: 512 ---------------PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
                          P+ +T+  +I++L + G V+ A E+  +M   G  P + TY  +I
Sbjct: 536 DAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALI 595

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           + + + GR++D  +LL  M  K     +YN  ++ LC     +EA +++ ++LR
Sbjct: 596 NGFSEQGRLDDARRLLSTMSCKPDA-VSYNSALKGLCRAERWKEAEEVVAEMLR 648



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 222/456 (48%), Gaps = 29/456 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
           D   Y  +L  L   +  + A+ ++  M R    C P    F+  + A+ + G L  A+ 
Sbjct: 211 DTYTYNTVLMGLCGARQWEDAEALMAEMVRN--HCPPNEVTFATQIRAFCQNGLLDRAVQ 268

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M +    P+++I +T ++      ++  A+  L  M      PN + YN  +KG C
Sbjct: 269 LLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLC 325

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSN 312
              R +D  +LI EM  K C P++ ++  +   LC+   +    +++E+M       D+ 
Sbjct: 326 IAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAV 385

Query: 313 L-------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
           +       F +QGR+++A +L+N M    C PDV+++ A + G CR    D A++++ QM
Sbjct: 386 IYNTLIYSFSEQGRVDDALKLLNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQM 442

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
               C    +++   ++ LC NG+   A E+     +   TP+ +TYS +++GL  +G +
Sbjct: 443 LREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLV 502

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             A ++ + M  K   P     N +++ LCR  + + A + +     K C  N + F  L
Sbjct: 503 ESAIELFQSMPCK---PDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNIL 559

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I   CQKG ++ A+ + + M      PD  TY  +I+  S+ GR+++A  L+  M  K  
Sbjct: 560 INSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCK-- 617

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
            P  V+Y + +   C+  R ++  +++ +ML + KC
Sbjct: 618 -PDAVSYNSALKGLCRAERWKEAEEVVAEML-RMKC 651



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 141/319 (44%), Gaps = 60/319 (18%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
            + M+   L +  L   A  VL  M + G  CRP+A  Y  L+ ++S  G++ +A+ +L+
Sbjct: 351 TFSMLTSCLCQNGLVDCAMEVLEQMHKYG--CRPDAVIYNTLIYSFSEQGRVDDALKLLN 408

Query: 201 MMQKAAVAPNLLICNTA-----------------------------------IHVLVVGN 225
            M     +P+++  N A                                   I  L    
Sbjct: 409 SM---PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNG 465

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           ++  A+   E+M   G TP+++TY+ LI G  +   ++ AI+L   MP   C PD   Y 
Sbjct: 466 RVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP---CKPDIFGYN 522

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQM 333
            V+  LC+  R ++  +L+  M                N    +G ++ A E+  QM + 
Sbjct: 523 AVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKY 582

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  PD+ TY A++NGF   G LD A+++L  M    CKP+ VSY + L GLC   +  EA
Sbjct: 583 GSTPDIFTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEA 639

Query: 394 REMINTSEEEWWTPNAITY 412
            E++         PN +T+
Sbjct: 640 EEVVAEMLRMKCPPNEVTF 658



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 143/295 (48%), Gaps = 10/295 (3%)

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           VV    ++   C    L  A+++L  +   G   + VS+   + G C +G+  +A E + 
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGAA-DPVSHNTLVAGYCRDGRLADA-ERLL 169

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
            +       N +TY+ +++G  R G+L++A  ++  M      P     N ++  LC   
Sbjct: 170 AAAGLSGAANVVTYTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGAR 226

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           + + A+  M E +   C  N V F + IR FCQ G L+ A+ LLD M      PD V Y+
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYS 286

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           T+++  S+ GRV++A EL+  ML K   P  + Y   +   C   R ED+ +L+ +M+ K
Sbjct: 287 TLVNGFSEQGRVDDAIELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQLIVEMVRK 343

Query: 579 Q--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
                   ++ +   LC  G ++ A ++L ++ +   + DA   + L+ S+  +G
Sbjct: 344 DCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQG 398



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 121/250 (48%), Gaps = 18/250 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I +   L+ L + +    A+ ++  M R         F+ L+ +  + G++ NA+ V 
Sbjct: 415 DVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVF 474

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M K    P+++  ++ I+ L     +  A+   + M      P++  YN ++KG C  
Sbjct: 475 EQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP---CKPDIFGYNAVLKGLCRA 531

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R +DA +LI  M  K C P+++++  ++  LC++  +    ++ E+M            
Sbjct: 532 ARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTY 591

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               N F +QGR+++A+ L   +S M C PD V+Y + + G CR     +A++++ +M  
Sbjct: 592 NALINGFSEQGRLDDARRL---LSTMSCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLR 648

Query: 368 HGCKPNTVSY 377
             C PN V++
Sbjct: 649 MKCPPNEVTF 658


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 217/453 (47%), Gaps = 30/453 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D   Y  +L+ L   K C+ A  ++ +MA  G  C P+  SY  V   + + G +  A  
Sbjct: 83  DVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYT 142

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M    + PN++ CN+ I  L     + KA   L++M    I PN  TYN LI GY 
Sbjct: 143 LFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYL 202

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              +  +A++++ EM   G  P+ V+Y  ++  LCK     E R++   M+         
Sbjct: 203 SSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDAT 262

Query: 312 ---NLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
              +L H    +G + E   + + M Q G   +  T++  +  +C+ G LD+A     +M
Sbjct: 263 TYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKM 322

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  P+ V+YT  ++GLC  G+  +A        ++  +PN IT++ ++HG    GK 
Sbjct: 323 QQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKW 382

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A ++  EM+ +G  P       +I  L +EGK+  A+K        G   NVV++ ++
Sbjct: 383 EKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTM 442

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G+   G++ E + LLDDM L    P  VT+ T++D                 M+S GL
Sbjct: 443 IHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGL 486

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            P V T +T+I   C+ GR+ED+L L  +ML K
Sbjct: 487 KPDVDTCKTLIDSCCEDGRIEDILTLFREMLGK 519



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 249/528 (47%), Gaps = 36/528 (6%)

Query: 167 MARRGIE-CRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           MAR G +   P+   F  L+     AG L      L  + K  +  + +     +  L  
Sbjct: 1   MARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCA 60

Query: 224 GNKLAKALRF-LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG--CSPD 280
             + + A+   L RM   G TP+V +Y+ L+KG C   + ++A +LI  M   G  C PD
Sbjct: 61  KKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPD 120

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFHDQGRIE---------EAKELVN 328
            VSY TV+    KE  + +   L  KM++     N+      I+         +A+ ++ 
Sbjct: 121 VVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 180

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           QM     +P+  TY ++++G+   G+  +A ++L++M   G +PN V+Y   ++ LC +G
Sbjct: 181 QMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSG 240

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              EARE+ N+  +    P+A TY  ++HG   EG L E  +V   MV+ G        +
Sbjct: 241 FHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFS 300

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           + I + C+ G++D A     +    G   ++V +T++I G C+ G L++A+S    M   
Sbjct: 301 IEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDD 360

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P+ +T+TT+I   S  G+ E+A EL  +M+ +G+ P V  +  +I R  + G+V + 
Sbjct: 361 GLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEA 420

Query: 569 LKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            KL + M     +    +YN +I      G + E  K+L  +L    K  A T + L++ 
Sbjct: 421 QKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG 480

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            ++ G                L PD+  CK + +    +G+ E+  TL
Sbjct: 481 MVSMG----------------LKPDVDTCKTLIDSCCEDGRIEDILTL 512



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 173/376 (46%), Gaps = 6/376 (1%)

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM-LQQMYHHGCKPNT 374
           D G +      + Q+ + G   D V +T ++   C       A  + L++M   GC P+ 
Sbjct: 25  DAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDV 84

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEW--WTPNAITYSVVMHGLRREGKLSEACDVV 432
            SY+  L GLC   K  EA E+I+   E+     P+ ++YS V+HG  +EG + +A  + 
Sbjct: 85  FSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLF 144

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            +M+  G  P  V  N +I  LC+   MD A+  +Q+ +++    N   + SLI G+   
Sbjct: 145 CKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSS 204

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G   EA+ +L +M    + P+ VTY  +ID L K+G   EA E+   M+  G  P   TY
Sbjct: 205 GQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTY 264

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIE--NLCSFGYLEEAGKILGKVLR 610
            +++H Y   G + ++  + + M+        +   IE    C  G L+EA     K+ +
Sbjct: 265 GSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQ 324

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                D  T   +++     G    A    C+M +  L P++     +     + GK E+
Sbjct: 325 LGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEK 384

Query: 671 ADTLMLRFVERGHIQP 686
           A+ L    ++RG I P
Sbjct: 385 AEELFYEMMDRG-IPP 399



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 162/385 (42%), Gaps = 64/385 (16%)

Query: 113 AVLRSQADERV--------ALQFFYWADRQWR-------------YRHDPIVYYMMLEIL 151
           AVL+   DE +        +L   Y +  QW               R + + Y M+++ L
Sbjct: 177 AVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCL 236

Query: 152 SKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAP 209
            K+     A+ +   M + G   +P+A +Y  L+  Y+  G L     V  +M +  +  
Sbjct: 237 CKSGFHAEAREIFNSMIQSGP--KPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRS 294

Query: 210 NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
           N    +  I+      +L +A     +MQ  G  P+++TY  +I G C + R+ DA+   
Sbjct: 295 NHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRF 354

Query: 270 DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQ 329
            +M   G SP+ +++ T++                       + F   G+ E+A+EL  +
Sbjct: 355 CQMIDDGLSPNIITFTTLI-----------------------HGFSMYGKWEKAEELFYE 391

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M   G  PDV  +TA+++   + G++ +A+K+   M   G KPN VSY   ++G    G+
Sbjct: 392 MMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGE 451

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             E  ++++        P A+T++ ++ G                MV  G  P       
Sbjct: 452 VGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVDTCKT 495

Query: 450 LIQSLCREGKMDGAKKFMQECLNKG 474
           LI S C +G+++      +E L K 
Sbjct: 496 LIDSCCEDGRIEDILTLFREMLGKA 520



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 130/285 (45%), Gaps = 13/285 (4%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM-DGAKK 465
           P+  T+ +++      G L+     + +++K G     V    L+++LC + +  D    
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD-----PDTVTYTTI 520
            ++     GC  +V ++++L++G C +   EEA  L+   ++  +D     PD V+Y+T+
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELI---HMMAEDGDNCPPDVVSYSTV 127

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ- 579
           I    K G V +A  L  KML  G+ P VVT  +VI   C+V  ++    +L++M+ +  
Sbjct: 128 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 187

Query: 580 --KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
              C T YN +I    S G   EA +IL ++ R   + +  T ++L++     G    A 
Sbjct: 188 MPNC-TTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++   M      PD      +      EG   E + +    V+ G
Sbjct: 247 EIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNG 291



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 8/204 (3%)

Query: 176 PEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+  +Y  V     + G+L +AM     M    ++PN++   T IH   +  K  KA   
Sbjct: 329 PDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEEL 388

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLC 292
              M   GI P+V  +  +I       ++ +A KL D MP  G  P+ VSY T++ GY  
Sbjct: 389 FYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFI 448

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
                 EV ++M K+++D  L   +        L++ M  MG  PDV T   +++  C  
Sbjct: 449 A----GEVGEVM-KLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCED 503

Query: 353 GELDQAKKMLQQMYHHGCKPNTVS 376
           G ++    + ++M     K +T++
Sbjct: 504 GRIEDILTLFREMLGKADKTDTIT 527


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 150/489 (30%), Positives = 236/489 (48%), Gaps = 21/489 (4%)

Query: 183 MVAYS----RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++AYS    RA +L + +     M K+   PN    NT I+       LA A   L RM+
Sbjct: 58  LIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMR 117

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRI 297
            AG+ P+  TYNCL+ G C    +  A  L  +MP + G   D+ SY  ++  LC   RI
Sbjct: 118 EAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRI 177

Query: 298 KEVRDLMEKM--------VNDSNLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            +   +  KM        V+   +  D      R+ EA+ L+ +M   G +P+VVTY A+
Sbjct: 178 DDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNAL 237

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           + G C+ G  D   K+L++M      P+  +YT  ++GLC +GK     ++++ +  +  
Sbjct: 238 IGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGV 297

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
               +TY+ +++G  + G +  A DV++ M +    P     N +I   C  GK+  A  
Sbjct: 298 ALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMA 357

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
           F+ +    G + N V F SLI G C  G+ + AL LLD M      PD  TY   IDAL 
Sbjct: 358 FLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALC 417

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-- 583
             G++EEA  L   +  KG+    V Y +++H YCQVG ++    L+EKM S + C    
Sbjct: 418 DEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMAS-ENCMPDV 476

Query: 584 -AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             YN +I+ LC    L+ A  +L K+ +   +    T ++L++  L       A K+  +
Sbjct: 477 HTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQ 536

Query: 643 MFNRNLIPD 651
           M +    PD
Sbjct: 537 MISSGCKPD 545



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 235/519 (45%), Gaps = 32/519 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE-AFSYLMVAYSRAGKLRNAMYV 198
           D   Y  ++  L +  L   A  +   M RR   C    +++ L+     AG++ +A  V
Sbjct: 124 DTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRV 183

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
            + M +    P +      +  L    ++ +A   L  M   G+ PNV+TYN LI G C 
Sbjct: 184 FAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQ 243

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
             R  D  KL+++M ++  SPD  +Y  V+  LCK                        G
Sbjct: 244 EGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCK-----------------------HG 280

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           ++    +++++    G   +V+TY A++NG+C+ G++  A  +LQ M  +   P   ++ 
Sbjct: 281 KVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFN 340

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++G C  GK  +A   +        +PN +T++ ++ G    G+   A  ++  M + 
Sbjct: 341 EVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEY 400

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P      + I +LC EG+++ A         KG   + V +TSL+ G+CQ GD++ A
Sbjct: 401 GVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSA 460

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             L++ M      PD  TY T+ID L K  R++ A +L+ KM  +G+ PT  T+  +I +
Sbjct: 461 FGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQ 520

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGK------ILGKVLRTA 612
                +  D  K+ E+M+S   C+    Q      S  + E A K       + ++    
Sbjct: 521 MLWDKKHADAAKMYEQMIS-SGCKPD-KQTYTLKISTDWFEGATKEENIDMAVVEMHEAG 578

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              D  T + ++++Y++ G+   A+    +M +  + PD
Sbjct: 579 VFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPD 617



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 212/460 (46%), Gaps = 49/460 (10%)

Query: 138 RHDP--IVYYMMLEILSK-TKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
           RH P    Y  ++  L K  K+  GAK VL     +G+      ++ L+  Y + G ++ 
Sbjct: 261 RHSPDCWTYTQVVHGLCKHGKVGHGAK-VLHEAIGKGVALEVLTYNALINGYCKGGDMKA 319

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ VL +M++  V P +   N  IH    G K+ KA+ FL +M  AG++PN +T+N LI 
Sbjct: 320 ALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLIS 379

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G C +   K A++L+D M   G  PD+ +Y   +  LC                      
Sbjct: 380 GQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALC---------------------- 417

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
            D+G++EEA  L + +   G     V YT++V+G+C+VG++D A  ++++M    C P+ 
Sbjct: 418 -DEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDV 476

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +Y   ++GLC   +   A ++++  +++   P   T+++++  +  + K ++A  +  +
Sbjct: 477 HTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQ 536

Query: 435 MVKKGFFPTPVEINLLIQSLCREG-----KMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           M+  G  P      L I +   EG      +D A   M E    G   +V  + ++I+ +
Sbjct: 537 MISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHE---AGVFPDVETYNAIIKAY 593

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS--------------KNGRVEEATE 535
              G  E+A      M     DPD  TY+ +++ +               K   V    E
Sbjct: 594 VDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQE 653

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           L  +M      P + TY+ ++   C   R+E++  LL KM
Sbjct: 654 LFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKM 693



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 151/624 (24%), Positives = 263/624 (42%), Gaps = 82/624 (13%)

Query: 123 VALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY- 181
            A   F    R+W   +D   Y ++++ L        A RV   M+R    CRP   +Y 
Sbjct: 143 AACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRG--WCRPGVHTYT 200

Query: 182 -LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
            L+    +  ++  A  +L  M    V PN++  N  I  L    +     + LE+M++ 
Sbjct: 201 VLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQ 260

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
             +P+  TY  ++ G C   ++    K++ E   KG + + ++Y  ++   CK   +K  
Sbjct: 261 RHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAA 320

Query: 301 RDLMEKM----VNDS--------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
            D+++ M    VN          + F   G++ +A   + QM+  G  P+ VT+ ++++G
Sbjct: 321 LDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISG 380

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG--------------KSLEAR 394
            C VGE   A ++L  M  +G  P+  +Y  F++ LC  G              K ++A 
Sbjct: 381 QCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAH 440

Query: 395 EMINTS---------------------EEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            +I TS                       E   P+  TY+ ++ GL +  +L  A D++ 
Sbjct: 441 NVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLD 500

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR-GFCQK 492
           +M K+G  PT    N+LI+ +  + K   A K  ++ ++ GC  +   +T  I   + + 
Sbjct: 501 KMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEG 560

Query: 493 GDLEEALSL-LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
              EE + + + +M+     PD  TY  II A    G  E+A    +KMLS  + P   T
Sbjct: 561 ATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTT 620

Query: 552 YRTVIHRYC--------------QVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSF 595
           Y  +++  C              ++  V +L +L E+M         + Y  ++  LC+ 
Sbjct: 621 YSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQ 680

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF----NRNLIPD 651
             LEE   +L K+   +   D      L+  Y N    L  Y+ AC  F    +++  P 
Sbjct: 681 CRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCN----LEMYREACEQFRSMAHQSFQPG 736

Query: 652 LKLCKKVSERLILEGKSEEADTLM 675
           LK C      L+L G  +  D  M
Sbjct: 737 LKSCC-----LLLSGLCDSGDHGM 755



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/425 (21%), Positives = 175/425 (41%), Gaps = 28/425 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+L LM   G+    + ++  + A    G+L  A  + S +    +  + +I  + +H
Sbjct: 390 ALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVH 449

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  +  A   +E+M      P+V TYN LI G C + R+  AI L+D+M  +G  P
Sbjct: 450 GYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEP 509

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVND--------------SNLFHDQGRIEEAKE 325
              ++  ++  +  +K+  +   + E+M++               ++ F    + E    
Sbjct: 510 TTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDM 569

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
            V +M + G  PDV TY A++  +   G  ++A     +M      P+  +Y+  LN +C
Sbjct: 570 AVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMC 629

Query: 386 H--------NGKSLEAREMINTSE------EEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           +        N K  +  ++ N  E      E    P   TY  ++ GL  + +L E   +
Sbjct: 630 NKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWL 689

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           + +M            + L+   C       A +  +   ++     + +   L+ G C 
Sbjct: 690 LLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCD 749

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            GD   A+S+  DM     + D V +  +ID L + G      E++  M +K  V +  T
Sbjct: 750 SGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRT 809

Query: 552 YRTVI 556
           Y +++
Sbjct: 810 YASLV 814


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 223/433 (51%), Gaps = 27/433 (6%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ ++ +  ++      +Y+   M+   + PNL+ CN  I+       +  A   L ++ 
Sbjct: 65  FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKIL 124

Query: 239 LAGITPNVLTYNCLIKGYC------DLH----RIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
             G  PN +T N LIKG C      D H    ++KDA+ L ++M L+  +PD  ++  ++
Sbjct: 125 KMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILV 184

Query: 289 GYLCKEKRIKEVRDLMEKM--------VNDSNLFHDQ----GRIEEAKELVNQMSQMGCI 336
              CKE R+KE ++++  M        V   N   D      ++ +AK + N M+Q+G  
Sbjct: 185 DGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVS 244

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PD+ +Y+ ++NGFC++  +D+A ++L++M+H    PN V+Y++ ++GLC +GK   A ++
Sbjct: 245 PDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKL 304

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           ++   +    PN +TYS ++  L +  ++  A  ++ +M  +G  P      +LI+ LC+
Sbjct: 305 VDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQ 364

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            GK++ A+K  ++ L KG  +NV  +T +I+GFC KG  +EAL+LL  M      P+  T
Sbjct: 365 SGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKT 424

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y  II +L K    E A +L+ +M+       V     +I      G           +L
Sbjct: 425 YEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTGSSPG-----NSLL 479

Query: 577 SKQKCRTAYNQVI 589
            K++ + AYN  I
Sbjct: 480 CKKQGKAAYNTPI 492



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 194/375 (51%), Gaps = 14/375 (3%)

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           ++Q+    PN+   N  +  LV        L   ++M+  GI PN++  N LI  +C L 
Sbjct: 53  LLQQNPTPPNIEF-NKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLG 111

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
            I  A  ++ ++   G  P+ ++  T++  LC   +I +   ++             G++
Sbjct: 112 HIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIV-------------GKL 158

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           ++A +L N+M      PDV T+T +V+GFC+ G + +AK +L  M   G KP  V+Y + 
Sbjct: 159 KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSL 218

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++G     +  +A+ + NT  +   +P+  +YS++++G  +   + EA ++++EM  K  
Sbjct: 219 MDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQI 278

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  V  + LI  LC+ GK+  A K + E  ++G   N+V ++S++   C+   ++ A++
Sbjct: 279 IPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIA 338

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           LL  M      P+  TYT +I  L ++G++E+A ++   +L KG    V TY  +I  +C
Sbjct: 339 LLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFC 398

Query: 561 QVGRVEDLLKLLEKM 575
             G  ++ L LL KM
Sbjct: 399 DKGLFDEALTLLSKM 413



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 221/448 (49%), Gaps = 35/448 (7%)

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           N + Y      + + + + DA+ L + +  +  +P  + +  ++G L K K    V  L 
Sbjct: 26  NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLS 85

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           +KM              E +         G  P++V    ++N FC++G +  A  +L +
Sbjct: 86  QKM--------------EFR---------GIKPNLVNCNILINSFCQLGHIPSAFSVLTK 122

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLE----------AREMINTSEEEWWTPNAITYSV 414
           +   G KPNT++    + GLC NGK  +          A ++ N    E   P+  T+++
Sbjct: 123 ILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTI 182

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ G  +EG++ EA +V+  M+ +G  P  V  N L+       +++ AK         G
Sbjct: 183 LVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLG 242

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
            + ++ +++ LI GFC+   ++EA+ LL +M+  +  P+ VTY+++ID L K+G++  A 
Sbjct: 243 VSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYAL 302

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
           +L+ +M  +G  P +VTY +++   C+  +V++ + LL +M ++  Q     Y  +I+ L
Sbjct: 303 KLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGL 362

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G LE+A K+   +L      +  T  V+++ + +KG+   A  +  +M +   IP+ 
Sbjct: 363 CQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNA 422

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVE 680
           K  + +   L  + ++E A+ L+   +E
Sbjct: 423 KTYEIIILSLFKKDENEMAEKLLCEMIE 450



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 153/323 (47%), Gaps = 23/323 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   + ++++   K    + AK VL +M  +GI+     ++ LM  Y    ++  A  + 
Sbjct: 176 DVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIF 235

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M +  V+P++   +  I+       + +A+  L+ M    I PNV+TY+ LI G C  
Sbjct: 236 NTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKS 295

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            +I  A+KL+DEM  +G  P+ V+Y +++  LCK  ++                      
Sbjct: 296 GKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQV---------------------- 333

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            + A  L+ QM   G  P++ TYT ++ G C+ G+L+ A+K+ + +   G   N  +YT 
Sbjct: 334 -DNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTV 392

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            + G C  G   EA  +++  E+    PNA TY +++  L ++ +   A  ++ EM++  
Sbjct: 393 MIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETN 452

Query: 440 FFPTPVEINLLIQSLCREGKMDG 462
           F       N LI S+   G   G
Sbjct: 453 FDGRVALTNDLIASIWVTGSSPG 475



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 150/348 (43%), Gaps = 13/348 (3%)

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           R G +  +KK     +      N + Y +      +N    +A  + N   ++  TP  I
Sbjct: 4   RYGFVPVSKKFHSFQFLINTHFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNI 63

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            ++ ++  L +         + ++M  +G  P  V  N+LI S C+ G +  A   + + 
Sbjct: 64  EFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKI 123

Query: 471 LNKGCAVNVVNFTSLIRGFCQK----------GDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           L  G   N +   +LI+G C            G L++A+ L + M L   +PD  T+T +
Sbjct: 124 LKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTIL 183

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSK 578
           +D   K GRV+EA  ++  M+ +G+ P VVTY +++  Y  V +V     +   M  L  
Sbjct: 184 VDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGV 243

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
                +Y+ +I   C    ++EA ++L ++       +  T   L++     G    A K
Sbjct: 244 SPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALK 303

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           +   M +R   P++     + + L    + + A  L+ +   +G IQP
Sbjct: 304 LVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQG-IQP 350


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 233/502 (46%), Gaps = 16/502 (3%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVV 223
            ++ R+ + C  + F+ L+ A  R  +  +A+  LS  M+ A ++PN    N  I+   +
Sbjct: 80  HMLHRKPLPCIIQ-FNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCL 138

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
              +      L ++   G+ P ++T+  LI G C       A++L D+M  +GC PD  +
Sbjct: 139 MQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYT 198

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHDQGR---IEEAKELVNQMS 331
           Y T++  LCK         L++KM         V  S L     +   + EA ++ + M 
Sbjct: 199 YTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMK 258

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
             G  P VV+YT+++ G C      +A  ML +M      P+ V+++  ++  C  G  L
Sbjct: 259 AKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVL 318

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           EA+ ++ T  E    PN ITY+ +MHG   + ++ EA  +   M+ +G  P     ++LI
Sbjct: 319 EAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILI 378

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
              C   ++D AK+   E +++G   N V++T+LI  FCQ G L EA  L  DM+     
Sbjct: 379 NGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYL 438

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD  TY+ +++   K G + +A  L   M    L P +V Y  +I   C+ G +    KL
Sbjct: 439 PDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKL 498

Query: 572 LEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
             ++     Q     Y  +I  LC  G L+EA +   K+       +  + +V++  +L 
Sbjct: 499 FSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQ 558

Query: 630 KGIPLLAYKVACRMFNRNLIPD 651
                 A ++   M ++  + D
Sbjct: 559 HKDESRAVQLIGEMRDKGFVAD 580



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 218/439 (49%), Gaps = 25/439 (5%)

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
           ++M+LAG++PN  T N LI  +C +  +     ++ ++   G  P  +++ T++  LCK 
Sbjct: 115 KQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKA 174

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
                                  G   +A EL + M   GC PDV TYT ++NG C++GE
Sbjct: 175 -----------------------GEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGE 211

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
              A  ++++M   GC+P+ V+Y+  ++ LC +    EA ++ +  + +  +P  ++Y+ 
Sbjct: 212 TAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTS 271

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ GL    +  EA  ++ EM      P  V  +LLI   C+EG +  A+  ++     G
Sbjct: 272 LIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMG 331

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              NV+ + SL+ G+  + ++ EA  L D M      PD  +Y+ +I+      R++EA 
Sbjct: 332 VEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAK 391

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENL 592
           +L  +M+ +GL P  V+Y T+IH +CQ+G++ +  +L + M +         Y+ ++E  
Sbjct: 392 QLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGF 451

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  GYL +A ++   +  T  K +     +L++S    G    A K+   +F   L PD+
Sbjct: 452 CKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDV 511

Query: 653 KLCKKVSERLILEGKSEEA 671
           ++   +   L  EG  +EA
Sbjct: 512 QIYTTIINGLCKEGLLDEA 530



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 208/411 (50%), Gaps = 12/411 (2%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           VL  + + G++     F+ L+    +AG+   A+ +   M      P++    T I+ L 
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              + A A   +++M   G  P+V+TY+ LI   C    + +A+ +   M  KG SP  V
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVV 267

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQM 330
           SY +++  LC   R KE   ++ +M + +            ++F  +G + EA+ ++  M
Sbjct: 268 SYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTM 327

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
           ++MG  P+V+TY ++++G+    E+ +A+K+   M   GCKP+  SY+  +NG C   + 
Sbjct: 328 TEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRI 387

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA+++ N    +  TPN ++Y+ ++H   + GKL EA ++ ++M   G+ P     ++L
Sbjct: 388 DEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVL 447

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           ++  C++G +  A +  +         N+V +T LI   C+ G+L  A  L  ++++   
Sbjct: 448 LEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGL 507

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            PD   YTTII+ L K G ++EA E   KM   G  P   +Y  +I  + Q
Sbjct: 508 QPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQ 558



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 195/410 (47%), Gaps = 29/410 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  ++  L K      A  +++ M   G  C+P+  +Y  L+ +  +   +  A+ 
Sbjct: 195 DVYTYTTIINGLCKMGETAAAAGLIKKMGEVG--CQPDVVTYSTLIDSLCKDRLVNEALD 252

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           + S M+   ++P ++   + I  L   ++  +A   L  M    I P+++T++ LI  +C
Sbjct: 253 IFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFC 312

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
               + +A  ++  M   G  P+ ++Y ++M GY                          
Sbjct: 313 KEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGY------------------------SL 348

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           Q  + EA++L + M   GC PDV +Y+ ++NG+C V  +D+AK++  +M H G  PNTVS
Sbjct: 349 QMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVS 408

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YT  ++  C  GK  EARE+        + P+  TYSV++ G  ++G L +A  + R M 
Sbjct: 409 YTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQ 468

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
                P  V   +LI S+C+ G ++ A+K   E    G   +V  +T++I G C++G L+
Sbjct: 469 GTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLD 528

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           EAL     M      P+  +Y  II    ++     A +L+ +M  KG V
Sbjct: 529 EALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFV 578



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 166/331 (50%), Gaps = 4/331 (1%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L  QM   G  P+  T   ++N FC +  +D    +L ++   G +P  +++T  +NGL
Sbjct: 112 SLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGL 171

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  G+  +A E+ +        P+  TY+ +++GL + G+ + A  ++++M + G  P  
Sbjct: 172 CKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDV 231

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  + LI SLC++  ++ A         KG +  VV++TSLI+G C     +EA ++L++
Sbjct: 232 VTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNE 291

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      PD VT++ +ID   K G V EA  ++  M   G+ P V+TY +++H Y     
Sbjct: 292 MTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQME 351

Query: 565 VEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           V +  KL + M+++  C+    +Y+ +I   C    ++EA ++  +++      +  +  
Sbjct: 352 VVEARKLFDVMITR-GCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYT 410

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
            L+ ++   G    A ++   M     +PDL
Sbjct: 411 TLIHAFCQLGKLREARELFKDMHTNGYLPDL 441



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 4/147 (2%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRN 194
           Y  D   Y ++LE   K      A R+ R M  +G   +P    Y ++  S  ++G L +
Sbjct: 437 YLPDLCTYSVLLEGFCKQGYLGKAFRLFRAM--QGTYLKPNLVMYTILIDSMCKSGNLNH 494

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  + S +    + P++ I  T I+ L     L +AL    +M+  G  PN  +YN +I+
Sbjct: 495 ARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIR 554

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDK 281
           G+        A++LI EM  KG   D+
Sbjct: 555 GFLQHKDESRAVQLIGEMRDKGFVADE 581


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 209/416 (50%), Gaps = 18/416 (4%)

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
             F    QL G  PN +T+  LIKG C   +I  A+   D +   G   D+V Y T++  
Sbjct: 112 FHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHG 171

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQ--------------GRIEEAKELVNQMSQMGCI 336
           LCK    +   DL+ ++  D NL                    + +A +L ++M   G  
Sbjct: 172 LCKVGETRAALDLLRRV--DGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGIS 229

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P+VVTY+A+++GF  VG+L  A  +  +M     KP+  ++   ++G C +GK  E + +
Sbjct: 230 PNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTV 289

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
                ++   PN +TY  +M G     ++++A  ++  M ++G  P     N+LI   C+
Sbjct: 290 FAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCK 349

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
             K+D A    +E  +K    +VV + SLI G C+ G +  AL L+D+M+     PD +T
Sbjct: 350 IKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIIT 409

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y++I+DAL KN +V++A  L+ K+  +G+ P + TY  +I   C+ GR+ED   + E +L
Sbjct: 410 YSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL 469

Query: 577 SKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
            K    T   Y  +I   C+ G  +EA  +L K+   +   DA T  +++ S  +K
Sbjct: 470 VKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDK 525



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 205/388 (52%), Gaps = 13/388 (3%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G +     +  L+    + G+ R A+ +L  +    V PN+++ +T I  +     +  A
Sbjct: 157 GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDA 216

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
                 M   GI+PNV+TY+ LI G+  + ++KDAI L ++M L+   PD  ++  ++  
Sbjct: 217 FDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDG 276

Query: 291 LCKEKRIKEVRDLMEKMVNDS---------NLFHDQGRIEE---AKELVNQMSQMGCIPD 338
            CK+ ++KE + +   M+            +L      ++E   AK ++  MSQ G  PD
Sbjct: 277 FCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPD 336

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           + +Y  +++GFC++ ++D+A  + ++M+H    P+ V+Y + ++GLC  GK   A ++++
Sbjct: 337 IQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVD 396

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
              +    P+ ITYS ++  L +  ++ +A  ++ ++  +G  P      +LI  LC+ G
Sbjct: 397 EMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGG 456

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           +++ A    ++ L KG  + V  +T +I GFC KG  +EAL+LL  M      PD VTY 
Sbjct: 457 RLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYE 516

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLV 546
            II +L      ++A E + +M+++GL+
Sbjct: 517 IIIRSLFDKDENDKA-EKLREMITRGLL 543



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 173/357 (48%), Gaps = 23/357 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           ++Y  +++ + K K    A  +   M  +GI      +S L+  +   G+L++A+ + + 
Sbjct: 198 VMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNK 257

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + P++   N  +       K+ +       M   GI PNV+TY  L+ GYC +  
Sbjct: 258 MILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKE 317

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +  A  ++  M  +G +PD  SY  ++   CK K                       +++
Sbjct: 318 VNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIK-----------------------KVD 354

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA  L  +M     IPDVVTY ++++G C++G++  A K++ +M+  G  P+ ++Y++ L
Sbjct: 355 EAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSIL 414

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           + LC N +  +A  ++   +++   PN  TY++++ GL + G+L +A ++  +++ KG+ 
Sbjct: 415 DALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYN 474

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
            T     ++I   C +G  D A   + +  +  C  + V +  +IR    K + ++A
Sbjct: 475 ITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKA 531



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 180/394 (45%), Gaps = 19/394 (4%)

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM----- 365
           S  FH+   + +A  L +++ +    P  + +  ++    +         + QQM     
Sbjct: 48  STTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGI 107

Query: 366 ------YHH-----GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
                 + H     G  PNT+++T  + GLC  G+  +A    +      +  + + Y  
Sbjct: 108 NPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGT 167

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++HGL + G+   A D++R +      P  V  + +I  +C++  ++ A     E ++KG
Sbjct: 168 LIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG 227

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
            + NVV +++LI GF   G L++A+ L + M L    PD  T+  ++D   K+G+++E  
Sbjct: 228 ISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 287

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
            +   M+ +G+ P VVTY +++  YC V  V     +L  M  +       +YN +I+  
Sbjct: 288 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGF 347

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C    ++EA  +  ++       D  T + L++     G    A K+   M +R + PD+
Sbjct: 348 CKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDI 407

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
                + + L    + ++A  L+ +  ++G I+P
Sbjct: 408 ITYSSILDALCKNHQVDKAIALLTKLKDQG-IRP 440



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 137/280 (48%), Gaps = 24/280 (8%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
            K V  +M ++GI+     +  LM  Y    ++  A  +L  M +  V P++   N  I 
Sbjct: 286 GKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILID 345

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                 K+ +A+   + M    I P+V+TYN LI G C L +I  A+KL+DEM  +G  P
Sbjct: 346 GFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPP 405

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D ++Y +++  LCK                         ++++A  L+ ++   G  P++
Sbjct: 406 DIITYSSILDALCKNH-----------------------QVDKAIALLTKLKDQGIRPNM 442

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            TYT +++G C+ G L+ A  + + +   G      +YT  ++G C+ G   EA  +++ 
Sbjct: 443 YTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSK 502

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++    P+A+TY +++  L  + + ++  + +REM+ +G
Sbjct: 503 MKDNSCIPDAVTYEIIIRSLFDKDE-NDKAEKLREMITRG 541


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 229/489 (46%), Gaps = 19/489 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +LR M R G    P AFSY  ++    RAG+  +A+ V   M + AV PN +  NT 
Sbjct: 183 AVGMLRRMGRDGAP-PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 241

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I   + G  L    R  ++M   G+ PN +TYN L+ G C   R+ +   L+DEM  +  
Sbjct: 242 IDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 301

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKE 325
            PD  +Y  +   L +    K +  L  K + +     D             G++  A+E
Sbjct: 302 VPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEE 361

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++  +   G +P  V Y  ++NG+C+ GEL+ A     QM     KP+ ++Y A +NGLC
Sbjct: 362 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 421

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
              +   A++++   ++    P   T++ ++    R G+L +   V+ EM + G  P  V
Sbjct: 422 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 481

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               ++ + C+ GK+  A   + +  +K    N   + ++I  + + G  ++A  L++ M
Sbjct: 482 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 541

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P  VTY  +I  L    ++ EA E++  + +  L+P  V+Y T+I   C  G +
Sbjct: 542 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 601

Query: 566 EDLLKLLEKMLS---KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           +  L L ++M     K   RT Y+Q+I  L   G L E   +  K+++       +  ++
Sbjct: 602 DKALDLQQRMHKYGIKSTVRT-YHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 660

Query: 623 LVESYLNKG 631
           +VE+Y   G
Sbjct: 661 MVEAYSKYG 669



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 223/477 (46%), Gaps = 33/477 (6%)

Query: 195 AMYVLSMMQKAAVAP--NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
           A+ +LS +   A AP  +L  CN  +  L+   + A   R    +  AG  P+   +N  
Sbjct: 111 ALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKA 170

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSP-DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           ++       + +A+ ++  M   G  P +  SY  V+  + +                  
Sbjct: 171 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRA----------------- 213

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 GR  +A E+ ++M++   +P+ +TY  +++G  + G+L+   ++  QM  HG K
Sbjct: 214 ------GRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLK 267

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN ++Y   L+GLC  G+  E   +++    +   P+  TYS++  GL R G       +
Sbjct: 268 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSL 327

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             + +K G        ++L+  LC++GK+  A++ +Q  +N G     V + +LI G+CQ
Sbjct: 328 FGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 387

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G+LE A S    M      PD +TY  +I+ L K  R+  A +L+M+M   G+ PTV T
Sbjct: 388 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 447

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           + T+I  Y + G++E    +L +M     +    +Y  ++   C  G + EA  IL  + 
Sbjct: 448 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 507

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
                 +A   + ++++Y+  G    A+ +  +M +  + P +     V+  L+++G
Sbjct: 508 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI-----VTYNLLIKG 559



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/455 (22%), Positives = 182/455 (40%), Gaps = 86/455 (18%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           + + I Y ++L  L +         +L  MA +  +  P+ F+Y  L    SR G  +  
Sbjct: 267 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQ--KMVPDGFTYSILFDGLSRNGDSKAM 324

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + +     K  V      C+  ++ L    K++ A   L+ +  AG+ P  + YN LI G
Sbjct: 325 LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 384

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---- 311
           YC    ++ A     +M  +   PD ++Y  ++  LCK +RI   +DL+ +M ++     
Sbjct: 385 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 444

Query: 312 --------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   + +   G++E+   ++++M + G  P+VV+Y ++VN FC+ G++ +A  +L 
Sbjct: 445 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 504

Query: 364 QMYH-----------------------------------HGCKPNTVSYTAFLNGLCHNG 388
            M+H                                   +G  P+ V+Y   + GLC+  
Sbjct: 505 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 564

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EA E+IN+       P+A++Y+ ++           AC                   
Sbjct: 565 QISEAEEIINSLSNHRLIPDAVSYNTLI----------SAC------------------- 595

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
                 C  G +D A    Q     G    V  +  LI G    G L E   L   M   
Sbjct: 596 ------CYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQN 649

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
              P    +  +++A SK G   +A +L  +ML K
Sbjct: 650 NVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 143/308 (46%), Gaps = 26/308 (8%)

Query: 134 QWRYRH---DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
           Q + RH   D I Y  ++  L K +    A+ +L  M   G+    E F+ L+ AY R G
Sbjct: 400 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 459

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L     VLS MQ+  + PN++   + ++      K+ +A+  L+ M    + PN   YN
Sbjct: 460 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 519

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            +I  Y +      A  L+++M   G SP  V+Y  ++  LC                  
Sbjct: 520 AIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC------------------ 561

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                +Q +I EA+E++N +S    IPD V+Y  +++  C  G +D+A  + Q+M+ +G 
Sbjct: 562 -----NQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 616

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           K    +Y   ++GL   G+  E   +     +    P+   +++++    + G   +A D
Sbjct: 617 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 676

Query: 431 VVREMVKK 438
           + +EM++K
Sbjct: 677 LRKEMLQK 684


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/589 (24%), Positives = 270/589 (45%), Gaps = 32/589 (5%)

Query: 104 RSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGA--- 160
           +SL P+++  +L+S+ +   AL  F    R   Y H P V++ +L+ L   KL   A   
Sbjct: 6   KSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAYAK 65

Query: 161 ----KRVLRLMARRG--IECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
                + L +  R      C+P   SY  L+ A   + K   A       +   ++PNL 
Sbjct: 66  NSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQ 125

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
             N  I +     +  KA   L  M   G +P+V +Y  LI        + DA+KL DEM
Sbjct: 126 TYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM 185

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ-------------GR 319
           P +G +PD   Y  ++    K+  I    ++ E+++   +++ +              G+
Sbjct: 186 PERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGK 245

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            +E+ E+ ++M +     D+ TY+ +++G C  G LD A ++ ++M  +G  P+ V Y  
Sbjct: 246 FDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNT 305

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            LNG    G+  E  E+    E+E      ++Y++++ GL    K+ EA  +   + +K 
Sbjct: 306 MLNGYLRAGRIEECLELWKVMEKE-GCRTVVSYNILIRGLFENAKVDEAISIWELLPEKD 364

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
                +   +L+  LC+ G ++ A   ++E  N    ++   ++S+I G C++G L+E  
Sbjct: 365 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA 424

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +LD M      P+      +I+   +  ++E+A      M+SKG  PTVVTY T+I+  
Sbjct: 425 GVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 484

Query: 560 CQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
            +  R  +   L+++ML K  +     Y+ ++  LC    L+ A  +  + L    K D 
Sbjct: 485 SKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDV 544

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
              ++++    + G    A ++   M  RN +P+L     V+   ++EG
Sbjct: 545 KMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNL-----VTHNTLMEG 588



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 199/394 (50%), Gaps = 13/394 (3%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            +S L+     +G L  A  V   M +  V+P++++ NT ++  +   ++ + L   + M
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 326

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           +  G    V++YN LI+G  +  ++ +AI + + +P K C  D ++Y  ++  LCK   +
Sbjct: 327 EKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 385

Query: 298 KEVRDLMEKMVN---DSNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            +   ++E+  N   D + F           +GR++E   +++QM++ GC P+     AV
Sbjct: 386 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAV 445

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           +NGF R  +L+ A +    M   GC P  V+Y   +NGL    +  EA  ++    ++ W
Sbjct: 446 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGW 505

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            PN ITYS++M+GL +  KL  A ++  + ++KGF P     N++I  LC  GK++ A +
Sbjct: 506 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 565

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
              E   + C  N+V   +L+ GF +  D E A  + D +      PD ++Y   +  L 
Sbjct: 566 LYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLC 625

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
              R+ +A   +   + +G++PT +T+  ++  Y
Sbjct: 626 SCHRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 120/528 (22%), Positives = 226/528 (42%), Gaps = 40/528 (7%)

Query: 161 KRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
           KRV++L+     E  P +   +  + +R     +  YV   + K    P L+      H 
Sbjct: 11  KRVIKLLKS---EKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVA-----HA 62

Query: 221 LVVGNKLAKALRFLERM-QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
               +   +AL   +RM ++ G  P + +YN L+    + ++  +A          G SP
Sbjct: 63  YAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSP 122

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           +  +Y  ++   C++K+                        ++AKEL+N M   G  PDV
Sbjct: 123 NLQTYNILIKISCRKKQF-----------------------DKAKELLNWMWGQGFSPDV 159

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN- 398
            +Y  ++N   + G +  A K+  +M   G  P+   Y   ++G    G  L A E+   
Sbjct: 160 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWER 219

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
             +     PN  +Y+V+++GL + GK  E+ ++   M K          + LI  LC  G
Sbjct: 220 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSG 279

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL--CKKDPDTVT 516
            +DGA +  +E    G + +VV + +++ G+ + G +EE L L   M    C+     V+
Sbjct: 280 NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT---VVS 336

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y  +I  L +N +V+EA  +   +  K      +TY  ++H  C+ G +   L +LE+  
Sbjct: 337 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 396

Query: 577 SKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
           + +      AY+ +I  LC  G L+E   +L ++ +   K +   C+ ++  ++      
Sbjct: 397 NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLE 456

Query: 635 LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            A +    M ++   P +     +   L    +  EA  L+   +++G
Sbjct: 457 DALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKG 504



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 142/291 (48%), Gaps = 12/291 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y +++  L K      A  +L        +    A+S ++    R G+L     VL
Sbjct: 368 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 427

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M K    PN  +CN  I+  V  +KL  ALRF   M   G  P V+TYN LI G    
Sbjct: 428 DQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 487

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL----MEKMVNDSNLFH 315
            R  +A  L+ EM  KG  P+ ++Y  +M  LC+ K++    +L    +EK        H
Sbjct: 488 ERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH 547

Query: 316 D--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +         G++E+A +L ++M Q  C+P++VT+  ++ GF +V + ++A K+   +  
Sbjct: 548 NIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 607

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
           +G +P+ +SY   L GLC   +  +A   +N + +    P AIT+++++ G
Sbjct: 608 YGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 82/170 (48%), Gaps = 11/170 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRL-----MARRGIECRPEAFSYLMVAYSRAGK 191
           ++ + I Y +++       LCQG K  + L        +G +   +  + ++     +GK
Sbjct: 505 WKPNMITYSLLM-----NGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGK 559

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           + +A+ + S M++    PNL+  NT +          +A +  + +   G+ P++++YN 
Sbjct: 560 VEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNI 619

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY-YTVMGYLCKEKRIKEV 300
            +KG C  HRI DA+  +++   +G  P  +++   V GYL  +  ++ V
Sbjct: 620 TLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPV 669


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 256/517 (49%), Gaps = 17/517 (3%)

Query: 163 VLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
           VL L    G E  P   +F+ +M  Y + G    A     MM K  + P+    N  IH 
Sbjct: 170 VLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHG 229

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL-KGCSP 279
           L+V   + +AL     M+  G+ P+++TY  + KG+  L  +  A ++I +M   +G  P
Sbjct: 230 LIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKP 289

Query: 280 DKVSYYTVMGYLCKEKRIKEV----RDLMEKMVNDSNLFHD--------QGRIEEAKELV 327
           D V+Y  ++   C+   I+E     RDL+      + + +         +G+++EA +L+
Sbjct: 290 DLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLL 349

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M      PD+VTY+ +++G C+ G++ QA ++ ++M  +   PN+ +++  L GLC  
Sbjct: 350 YEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEK 409

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G   +AR   ++       P+   Y++++ G  + G + EA  + + +  K   P+ V  
Sbjct: 410 GMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTF 469

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N LI   C+  K+  A++ ++     G   + V +T+L+  +C++G++ +   LL +M L
Sbjct: 470 NSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNL 529

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
              +P  VTYT +I  L K  ++EE+ +L+  M +KGL P  +TY T+I  +C+   +  
Sbjct: 530 KDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRK 589

Query: 568 LLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
             +LL+ ML  + +     YN +I+ LC +G +E+A ++L  +              +++
Sbjct: 590 AFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIK 649

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           ++  KG    A KV  +M  +     +K    V  RL
Sbjct: 650 AHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRL 686



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 236/495 (47%), Gaps = 26/495 (5%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
            + R+A+  L        AP+++  NT +           A  F   M   GI P+  +Y
Sbjct: 164 SRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSY 223

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N LI G      +++A++L ++M  +G  PD V+Y  V                      
Sbjct: 224 NILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIV---------------------- 261

Query: 310 DSNLFHDQGRIEEAKELVNQM-SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
            +  FH  G +  A+E++ +M +  G  PD+VTYT ++ G C++G +++A ++ + +   
Sbjct: 262 -AKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSS 320

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G + N + Y+  L+ LC  G+  EA +++   E     P+ +TYS+++HGL ++GK+ +A
Sbjct: 321 GFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQA 380

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             + +EM     FP     + +++ LC +G +  A+ +    +      +V  +  +I G
Sbjct: 381 IQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDG 440

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           + + GD+EEA+ L   +      P  VT+ ++I    KN +V EA  L+  +   GL P+
Sbjct: 441 YVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPS 500

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
            VTY T+++ YC+ G +  L +LL +M  K  +     Y  VI+ LC    LEE+ ++L 
Sbjct: 501 AVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLE 560

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
            +       D  T + +++ +        A+++   M   NL P       + + L   G
Sbjct: 561 DMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYG 620

Query: 667 KSEEADTLMLRFVER 681
             E+AD +++   +R
Sbjct: 621 DVEDADRVLVSLQDR 635



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 148/645 (22%), Positives = 286/645 (44%), Gaps = 111/645 (17%)

Query: 127 FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY 186
           F++ +  ++ ++H  +  +++  +L++ +  +  + VL  M +  +  R           
Sbjct: 49  FYHLSRNEFGFQHSRVSRFLVSHVLARKRRFKDLRLVLDQMLQEEVASR----------- 97

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
                + +A++VL  M++  + P++   N+ ++ L   + +      ++    +G   + 
Sbjct: 98  ----MVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKD---SGTPQSA 150

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
            T + ++ G C   R +DA+  + +   K  +P  VS+ T+M   CK       +     
Sbjct: 151 RTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCM 210

Query: 307 MV---------NDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
           M+         + + L H     G +EEA EL N M + G  PD+VTY  V  GF  +G 
Sbjct: 211 MLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGL 270

Query: 355 LDQAKKMLQQMY-HHGCKPNTVSYTAFLNG------------------------------ 383
           +  A++++Q+M    G KP+ V+YT  + G                              
Sbjct: 271 MSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYS 330

Query: 384 -----LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
                LC  G+  EA +++   E     P+ +TYS+++HGL ++GK+ +A  + +EM   
Sbjct: 331 VLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFN 390

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECL--------------------------- 471
             FP     + +++ LC +G +  A+ +    +                           
Sbjct: 391 RIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEA 450

Query: 472 --------NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
                   +K    ++V F SLI GFC+   + EA  LL+ + L   +P  VTYTT+++A
Sbjct: 451 VRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNA 510

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC-- 581
             + G + +  EL+++M  K + PTVVTY  VI   C+  ++E+ ++LLE M +K     
Sbjct: 511 YCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPD 570

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
           +  YN +I+  C    + +A ++L  +L    +   +T +VL++     G    A +V  
Sbjct: 571 QITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLV 630

Query: 642 RMFNRNLIPDLKLCKKVSERLI----LEGKSEEADTLMLRFVERG 682
            + +RN    + L K     +I    ++G ++ A  +  + VE+G
Sbjct: 631 SLQDRN----INLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKG 671



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 192/404 (47%), Gaps = 27/404 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+ R +   G +     +S L+ +  + G++  A+ +L  M+   + P+L+  +  IH
Sbjct: 310 ALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIH 369

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    K+ +A++  + M    I PN   ++ ++KG C+   + DA    D + +    P
Sbjct: 370 GLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRP 429

Query: 280 DKVSYYTVM--GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
           D V+ Y +M  GY+                          G +EEA  L  ++      P
Sbjct: 430 D-VTLYNIMIDGYV------------------------KLGDVEEAVRLYKRLRDKAITP 464

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
            +VT+ +++ GFC+  ++ +A+++L+ +  HG +P+ V+YT  +N  C  G   +  E++
Sbjct: 465 SIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELL 524

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
                +   P  +TY+VV+ GL ++ KL E+  ++ +M  KG  P  +  N +IQ  C+ 
Sbjct: 525 LEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKA 584

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
             M  A + + + L          +  LI G C+ GD+E+A  +L  +     +   V Y
Sbjct: 585 KDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAY 644

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           TT+I A    G  + A ++  +M+ KG   ++  Y  VI+R C+
Sbjct: 645 TTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCK 688



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 206/449 (45%), Gaps = 28/449 (6%)

Query: 98  ELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
           +L  +L S+    +C   R Q DE  ALQ  Y  +     + D + Y +++  L K    
Sbjct: 323 QLNVILYSVLLSSLCK--RGQVDE--ALQLLYEMEAN-NLQPDLVTYSILIHGLCKQGKV 377

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           Q A ++ + M    I     A S ++      G L +A      +  + + P++ + N  
Sbjct: 378 QQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIM 437

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I   V    + +A+R  +R++   ITP+++T+N LI G+C   ++ +A +L++ + L G 
Sbjct: 438 IDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGL 497

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
            P  V+Y T+M   C+E                       G I +  EL+ +M+     P
Sbjct: 498 EPSAVTYTTLMNAYCEE-----------------------GNINKLHELLLEMNLKDIEP 534

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
            VVTYT V+ G C+  +L+++ ++L+ M   G  P+ ++Y   +   C      +A E++
Sbjct: 535 TVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELL 594

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +        P   TY+V++ GL R G + +A  V+  +  +    T V    +I++ C +
Sbjct: 595 DDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVK 654

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G    A K   + + KG  V++ +++++I   C++  + EA      M      PD   +
Sbjct: 655 GDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIF 714

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLV 546
             +++A  + G V    EL+  M+  GL+
Sbjct: 715 EMMLNAFHRAGHVHSVFELLAVMIKFGLL 743



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 214/471 (45%), Gaps = 45/471 (9%)

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
           V    +  AL  L +M+   + P++ TYN L+    +L        + +++   G     
Sbjct: 94  VASRMVHDALFVLVKMKEQNLRPSIQTYNSLLY---NLRHTDIMWDVYNDIKDSGTPQSA 150

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
            +   ++  LC + R +           D+ LF  Q    + KE           P VV+
Sbjct: 151 RTSSIIVDGLCGQSRFR-----------DAVLFLRQN---DGKEFA---------PSVVS 187

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           +  +++ +C++G  D AK     M  +G  P+T SY   ++GL   G   EA E+ N  E
Sbjct: 188 FNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDME 247

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK-KGFFPTPVEINLLIQSLCREGKM 460
           ++   P+ +TY +V  G    G +S A +++++M+  +G  P  V   +LI   C+ G +
Sbjct: 248 KQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNI 307

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           + A +  ++ L+ G  +NV+ ++ L+   C++G ++EAL LL +M      PD VTY+ +
Sbjct: 308 EEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSIL 367

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SK 578
           I  L K G+V++A +L  +M    + P    +  ++   C+ G + D     + ++  + 
Sbjct: 368 IHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNL 427

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
           +   T YN +I+     G +EEA ++  ++   A      T + L+  +           
Sbjct: 428 RPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGF----------- 476

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
             C+  NR ++   +L + +     LE  +    TLM  + E G+I    E
Sbjct: 477 --CK--NRKVVEARRLLESIKLH-GLEPSAVTYTTLMNAYCEEGNINKLHE 522


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 215/431 (49%), Gaps = 28/431 (6%)

Query: 172 IECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           I C   +F+ L+  +    KL  A+     + K    P L+  NT +H L V +++++AL
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
               +M      PNV+T+  L+ G C   R+ +A+ L+D M   G  P++++Y T++  +
Sbjct: 71  DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPD 338
           CK        +L+ KM   S++  D              GR  +A+ L  +M   G  PD
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           +VTY+ ++NGFC  G+  +A+++LQ+M      P+ V+++  +N L   G    A++++ 
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK-----------KGFFPTPVEI 447
                   PN +T + ++ GL   GKL +A ++ + M K            G  P     
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N+LI  L  EGK   A++  +E  ++G   + V ++S+I G C++  L+EA  + D M  
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ VT+ T+I    K G V++  EL  +M  +G+V   +TY T+I  + +VG +  
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 568 LLKLLEKMLSK 578
            L + ++M+S 
Sbjct: 427 SLDIFQEMISS 437



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 218/441 (49%), Gaps = 41/441 (9%)

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           +KL  AL    ++   G  P ++T+N L+ G C   R+ +A+ L  +M    C P+ V++
Sbjct: 29  SKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTF 84

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            T+M  LC+E R+ E   L+++MV D                       G  P+ +TY  
Sbjct: 85  TTLMNGLCREGRVVEAVALLDRMVED-----------------------GLQPNQITYGT 121

Query: 345 VVNGFCRVGELDQAKKMLQQMYH-HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
           +V+G C++G+   A  +L++M      KP+ V Y+A ++GL  +G+  +A+ +    +++
Sbjct: 122 IVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK 181

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+ +TYS +++G    GK SEA  +++EM+ +   P  V  + LI +L +EG ++ A
Sbjct: 182 GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSA 241

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD-----------P 512
           +  +QE ++ G   NVV   +L+ G C  G L++AL +   M     D           P
Sbjct: 242 QDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEP 301

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D  TY  +I  L   G+  EA EL  +M  +G+VP  VTY ++I+  C+  R+++  ++ 
Sbjct: 302 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMF 361

Query: 573 EKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           + M SK        +N +I   C  G +++  ++  ++ R    A+A T   L+  +   
Sbjct: 362 DSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKV 421

Query: 631 GIPLLAYKVACRMFNRNLIPD 651
           G    +  +   M +  + PD
Sbjct: 422 GNINGSLDIFQEMISSGVYPD 442



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 186/397 (46%), Gaps = 30/397 (7%)

Query: 174 CRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C+P    F+ LM    R G++  A+ +L  M +  + PN +   T +  +        AL
Sbjct: 77  CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 232 RFLERMQ-LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
             L +M+ L+ I P+V+ Y+ +I G     R  DA  L  EM  KG  PD V+Y  ++  
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196

Query: 291 LCKEKRIKEVRDLMEKM---------VNDSNLFH---DQGRIEEAKELVNQMSQMGCIPD 338
            C   +  E + L+++M         V  S L +    +G +  A++L+ +M   G  P+
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQM-----------YHHGCKPNTVSYTAFLNGLCHN 387
           VVT   +++G C  G+L  A +M + M             +G +P+  +Y   ++GL + 
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           GK LEA E+          P+ +TYS +++GL ++ +L EA  +   M  K F P  V  
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTF 376

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N LI   C+ G +D   +   E   +G   N + + +LIRGF + G++  +L +  +M  
Sbjct: 377 NTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMIS 436

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEAT----ELMMKM 540
               PDT+T   ++  L     ++ A     EL M M
Sbjct: 437 SGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMSM 473



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 191/372 (51%), Gaps = 24/372 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA-VAPNLLICNTAI 218
           A  +L  M   G++     +  ++    + G   +A+ +L  M++ + + P+++I +  I
Sbjct: 100 AVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAII 159

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
             L    +   A      MQ  GI P+++TY+C+I G+C   +  +A +L+ EM ++  S
Sbjct: 160 DGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKEL 326
           PD V++  ++  L KE  +   +DL+++M++              +   D G++++A E+
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279

Query: 327 VNQMSQM-----------GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
              M +            G  PDV TY  +++G    G+  +A+++ ++M H G  P+TV
Sbjct: 280 FKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTV 339

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y++ +NGLC   +  EA +M ++   + ++PN +T++ ++ G  + G + +  ++  EM
Sbjct: 340 TYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEM 399

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            ++G     +    LI+   + G ++G+    QE ++ G   + +   +++ G   K +L
Sbjct: 400 GRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 459

Query: 496 EEALSLLDDMYL 507
           + AL++L+++ +
Sbjct: 460 KRALAMLEELQM 471



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 162/351 (46%), Gaps = 12/351 (3%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            D   AL      +     + D ++Y  +++ L K      A+ +   M  +GI      
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           +S ++  +  +GK   A  +L  M    ++P+++  +  I+ LV    L  A   L+ M 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
            +G+ PNV+T N L+ G CD  ++KDA+++   M       D    +  +     E  ++
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGV-----EPDVQ 304

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
               L+  ++N       +G+  EA+EL  +M   G +PD VTY++++NG C+   LD+A
Sbjct: 305 TYNILISGLIN-------EGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            +M   M      PN V++   + G C  G   +  E+           NAITY  ++ G
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            R+ G ++ + D+ +EM+  G +P  + I  ++  L  + ++  A   ++E
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEE 468



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 145/293 (49%), Gaps = 20/293 (6%)

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
           + P  +T++ ++HGL  E ++SEA D+  +M K    P  V    L+  LCREG++  A 
Sbjct: 46  FHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAV 101

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY-LCKKDPDTVTYTTIIDA 523
             +   +  G   N + + +++ G C+ GD   AL+LL  M  L    PD V Y+ IID 
Sbjct: 102 ALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDG 161

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR- 582
           L K+GR  +A  L ++M  KG+ P +VTY  +I+ +C  G+  +  +LL++ML ++    
Sbjct: 162 LWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPD 221

Query: 583 -TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI---PLLAYK 638
              ++ +I  L   G L  A  +L +++ +    +  TC+ L++   + G     L  +K
Sbjct: 222 VVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFK 281

Query: 639 V---------ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                     A   FN  + PD++    +   LI EGK  EA+ L      RG
Sbjct: 282 AMQKSMMDIDATHAFN-GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 333


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 222/436 (50%), Gaps = 44/436 (10%)

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC-DL 259
           ++Q   V PNL           VG   A+ L   ++M   G+  +V + N  I     DL
Sbjct: 148 LIQDFWVNPNL----------DVGVSFARKL--FDKMLNYGLLISVDSCNLFISHLSEDL 195

Query: 260 HRIKDAIK------LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
             IK A+K      LI+EM +KG  P+  +Y  V+  LCK                    
Sbjct: 196 DGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCK-------------------- 235

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
               G++ EA+ ++ +M   G  PD V YT +++GFC++G +  A ++  +M      P+
Sbjct: 236 ---TGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD 292

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            ++YTA + GLC  G+ +EA ++ +    +   P+ +TY+ ++ G  +EGK+ EA  +  
Sbjct: 293 FITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHN 352

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           +M++ G  P  V    L   LC+ G++D A + + E   KG  +N+  + SL+ G C+ G
Sbjct: 353 QMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAG 412

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           ++++A+ L+ DM +    PD VTYTT++DA  K+  +  A EL+ +ML + L PTVVT+ 
Sbjct: 413 NIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFN 472

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            +++ +C  G +ED  KLL+ ML K      T YN +I+  C    +    +I   +   
Sbjct: 473 VLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 532

Query: 612 ASKADASTCHVLVESY 627
               D +T ++L++ +
Sbjct: 533 GVVPDGNTYNILIKGH 548



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 198/388 (51%), Gaps = 16/388 (4%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           MQ   + PN    N  I +L    K+A+A R L  M   GI P+ + Y  LI G+C L  
Sbjct: 214 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 273

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
           +  A +L DEM  +  SPD ++Y  V+  LC+  R+ E   L  +MV             
Sbjct: 274 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 333

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             + +  +G+++EA  L NQM QMG  P++VTYTA+ +G C+ GE+D A ++L +M   G
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 393

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            + N  +Y + +NGLC  G   +A +++   E   + P+A+TY+ +M    +  ++  A 
Sbjct: 394 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 453

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           +++R+M+ +   PT V  N+L+   C  G ++  +K ++  L KG   N   + SLI+ +
Sbjct: 454 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 513

Query: 490 CQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           C + ++     +   M  C K   PD  TY  +I    K   ++EA  L   M+ KG   
Sbjct: 514 CIRNNMRATTEIYRGM--CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNL 571

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TV +Y  +I  + +  +  +  +L E+M
Sbjct: 572 TVSSYNALIKGFYKRKKFLEARELFEQM 599



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 205/441 (46%), Gaps = 23/441 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + +P  Y  ++ +L KT     A+RVLR M   GI      ++ L+  + + G + +A  
Sbjct: 220 KPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYR 279

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   MQK  ++P+ +     I  L    ++ +A +    M    + P+ +TY  LI GYC
Sbjct: 280 LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYC 339

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              ++K+A  L ++M   G +P+ V+Y  +   LCK                        
Sbjct: 340 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK-----------------------C 376

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G ++ A EL+++M + G   ++ TY ++VNG C+ G +DQA K+++ M   G  P+ V+Y
Sbjct: 377 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 436

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T  ++  C + + + A E++    +    P  +T++V+M+G    G L +   +++ M++
Sbjct: 437 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 496

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P     N LI+  C    M    +  +    KG   +   +  LI+G C+  +++E
Sbjct: 497 KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE 556

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A  L  DM     +    +Y  +I    K  +  EA EL  +M  +GLV     Y     
Sbjct: 557 AWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 616

Query: 558 RYCQVGRVEDLLKLLEKMLSK 578
                G++E  L+L ++ + K
Sbjct: 617 INYDEGKMELTLELCDEAIEK 637



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 169/343 (49%), Gaps = 10/343 (2%)

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE-------AREMINTSEEEWWTPNAI 410
           A+K+  +M ++G   +  S   F++ L  +   ++         ++I   + +   PN  
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY+ V+  L + GK++EA  V+REM+ +G  P  V    LI   C+ G +  A +   E 
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
             +  + + + +T++I G CQ G + EA  L  +M   + +PD VTYT +ID   K G++
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQV 588
           +EA  L  +ML  GL P +VTY  +    C+ G V+   +LL +M  K  +     YN +
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           +  LC  G +++A K++  +       DA T   L+++Y      + A+++  +M +R L
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
            P +     +     + G  E+ + L+   +E+G I P +  +
Sbjct: 465 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG-IMPNATTY 506



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/315 (20%), Positives = 133/315 (42%), Gaps = 12/315 (3%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R   D + Y  +++   K    + A  +   M + G+      ++ L     + G++  A
Sbjct: 323 RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTA 382

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +L  M +  +  N+   N+ ++ L     + +A++ ++ M++AG  P+ +TY  L+  
Sbjct: 383 NELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 442

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----D 310
           YC    +  A +L+ +M  +   P  V++  +M   C    +++   L++ M+      +
Sbjct: 443 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 502

Query: 311 SNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
           +  ++        +  +    E+   M   G +PD  TY  ++ G C+   + +A  + +
Sbjct: 503 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHR 562

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M   G      SY A + G     K LEARE+      E    +   Y++       EG
Sbjct: 563 DMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEG 622

Query: 424 KLSEACDVVREMVKK 438
           K+    ++  E ++K
Sbjct: 623 KMELTLELCDEAIEK 637



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 12/217 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  D + Y  +++   K++    A  +LR M  R ++     F+ LM  +  +G L +  
Sbjct: 429 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 488

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M +  + PN    N+ I    + N +         M   G+ P+  TYN LIKG+
Sbjct: 489 KLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGH 548

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
           C    +K+A  L  +M  KG +    SY  ++    K K+  E R+L E+M  +      
Sbjct: 549 CKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADR 608

Query: 312 ---NLF----HDQGRIEEAKELVNQMSQMGCIPDVVT 341
              N+F    +D+G++E   EL ++  +   + D+ T
Sbjct: 609 EIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 645


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 215/431 (49%), Gaps = 28/431 (6%)

Query: 172 IECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           I C   +F+ L+  +    KL  A+     + K    P L+  NT +H L V +++++AL
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
               +M      PNV+T+  L+ G C   R+ +A+ L+D M   G  P++++Y T++  +
Sbjct: 71  DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPD 338
           CK        +L+ KM   S++  D              GR  +A+ L  +M   G  PD
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           +VTY+ ++NGFC  G+  +A+++LQ+M      P+ V+++  +N L   G    A++++ 
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK-----------KGFFPTPVEI 447
                   PN +T + ++ GL   GKL +A ++ + M K            G  P     
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N+LI  L  EGK   A++  +E  ++G   + V ++S+I G C++  L+EA  + D M  
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ VT+ T+I    K G V++  EL  +M  +G+V   +TY T+I  + +VG +  
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 568 LLKLLEKMLSK 578
            L + ++M+S 
Sbjct: 427 SLDIFQEMISS 437



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 218/441 (49%), Gaps = 41/441 (9%)

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           +KL  AL    ++   G  P ++T+N L+ G C   R+ +A+ L  +M    C P+ V++
Sbjct: 29  SKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTF 84

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            T+M  LC+E R+ E   L+++MV D                       G  P+ +TY  
Sbjct: 85  TTLMNGLCREGRVVEAVALLDRMVED-----------------------GLQPNQITYGT 121

Query: 345 VVNGFCRVGELDQAKKMLQQMYH-HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
           +V+G C++G+   A  +L++M      KP+ V Y+A ++GL  +G+  +A+ +    +++
Sbjct: 122 IVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK 181

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+ +TYS +++G    GK SEA  +++EM+ +   P  V  + LI +L +EG ++ A
Sbjct: 182 GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSA 241

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD-----------P 512
           +  +QE ++ G   NVV   +L+ G C  G L++AL +   M     D           P
Sbjct: 242 QDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEP 301

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D  TY  +I  L   G+  EA EL  +M  +G+VP  VTY ++I+  C+  R+++  ++ 
Sbjct: 302 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMF 361

Query: 573 EKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           + M SK        +N +I   C  G +++  ++  ++ R    A+A T   L+  +   
Sbjct: 362 DSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKV 421

Query: 631 GIPLLAYKVACRMFNRNLIPD 651
           G    +  +   M +  + PD
Sbjct: 422 GNINGSLDIFQEMISSGVYPD 442



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 187/397 (47%), Gaps = 30/397 (7%)

Query: 174 CRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C+P    F+ LM    R G++  A+ +L  M +  + PN +   T +  +        AL
Sbjct: 77  CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 232 RFLERMQ-LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
             L +M+ L+ I P+V+ Y+ +I G     R  DA  L  EM  KG  PD V+Y  ++  
Sbjct: 137 NLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196

Query: 291 LCKEKRIKEVRDLMEKM---------VNDSNLFH---DQGRIEEAKELVNQMSQMGCIPD 338
            C   +  E + L+++M         V  S L +    +G +  A++L+ +M   G  P+
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQM-----------YHHGCKPNTVSYTAFLNGLCHN 387
           VVT   +++G C  G+L  A +M + M             +G +P+  +Y   ++GL + 
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           GK LEA E+          P+ +TYS +++GL ++ +L EA  +   M  K F P  V  
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTF 376

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N LI   C+ G +D   +   E   +G   N + + +LIRGF + G++  +L +  +M  
Sbjct: 377 NTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMIS 436

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEAT----ELMMKM 540
               PDT+T   ++  L     +++A     EL M M
Sbjct: 437 SGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMSM 473



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 192/372 (51%), Gaps = 24/372 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA-VAPNLLICNTAI 218
           A  +L  M   G++     +  ++    + G   +A+ +L  M++ + + P+++I +  I
Sbjct: 100 AVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAII 159

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
             L    +   A      MQ  GI P+++TY+C+I G+C   +  +A +L+ EM ++  S
Sbjct: 160 DGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS 219

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKEL 326
           PD V++  ++  L KE  +   +DL+++M++              +   D G++++A E+
Sbjct: 220 PDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEM 279

Query: 327 VNQMSQM-----------GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
              M +            G  PDV TY  +++G    G+  +A+++ ++M H G  P+TV
Sbjct: 280 FKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTV 339

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y++ +NGLC   +  EA +M ++   + ++PN +T++ ++ G  + G + +  ++  EM
Sbjct: 340 TYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEM 399

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            ++G     +    LI+   + G ++G+    QE ++ G   + +   +++ G   K +L
Sbjct: 400 GRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 459

Query: 496 EEALSLLDDMYL 507
           ++AL++L+++ +
Sbjct: 460 KKALAMLEELQM 471



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 162/351 (46%), Gaps = 12/351 (3%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            D   AL      +     + D ++Y  +++ L K      A+ +   M  +GI      
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           +S ++  +  +GK   A  +L  M    ++P+++  +  I+ LV    L  A   L+ M 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
            +G+ PNV+T N L+ G CD  ++KDA+++   M       D    +  +     E  ++
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGV-----EPDVQ 304

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
               L+  ++N       +G+  EA+EL  +M   G +PD VTY++++NG C+   LD+A
Sbjct: 305 TYNILISGLIN-------EGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            +M   M      PN V++   + G C  G   +  E+           NAITY  ++ G
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            R+ G ++ + D+ +EM+  G +P  + I  ++  L  + ++  A   ++E
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEE 468



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 145/293 (49%), Gaps = 20/293 (6%)

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
           + P  +T++ ++HGL  E ++SEA D+  +M K    P  V    L+  LCREG++  A 
Sbjct: 46  FHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAV 101

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY-LCKKDPDTVTYTTIIDA 523
             +   +  G   N + + +++ G C+ GD   AL+LL  M  L    PD V Y+ IID 
Sbjct: 102 ALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDG 161

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR- 582
           L K+GR  +A  L ++M  KG+ P +VTY  +I+ +C  G+  +  +LL++ML ++    
Sbjct: 162 LWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPD 221

Query: 583 -TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI---PLLAYK 638
              ++ +I  L   G L  A  +L +++ +    +  TC+ L++   + G     L  +K
Sbjct: 222 VVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFK 281

Query: 639 V---------ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                     A   FN  + PD++    +   LI EGK  EA+ L      RG
Sbjct: 282 AMQKSMMDIDATHAFN-GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 333


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 195/404 (48%), Gaps = 27/404 (6%)

Query: 172 IECRP----EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           ++CRP      FS L+ A S+  K    +Y+   MQ   +  NL  CN  ++     ++L
Sbjct: 73  VQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQL 132

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           + AL FL +M   G  P+++T+  L+ G+C   RI DA+ + D M   G  P+ V Y T+
Sbjct: 133 SLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTI 192

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +  LCK K++                       + A +L+N+M   G  PD VTY ++++
Sbjct: 193 IDGLCKSKQV-----------------------DNALDLLNRMEVDGIRPDAVTYNSLIS 229

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G C  G  D A +M+  M      P+  ++ A ++     G+  EA E+          P
Sbjct: 230 GLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDP 289

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           + +TYS++++GL    +L EA  +   MV KG FP  V  ++LI   C+  K++   K  
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            E   +G   N V +T LI+G+C+ G L  A  +   M  C   P+ +TY  ++  L  N
Sbjct: 350 CEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDN 409

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           G++E+A  ++  M   G+   +VTY  +I   C+ G V D   L
Sbjct: 410 GKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDL 453



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 192/372 (51%), Gaps = 31/372 (8%)

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
           E+MQ+ GI  N+ T N L+  +C   ++  A+  + +M   G  PD V++ +++   C+ 
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRG 164

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
            RI +   + ++MV                       +MG  P+VV Y  +++G C+  +
Sbjct: 165 DRIYDALYMFDRMV-----------------------EMGYEPNVVIYNTIIDGLCKSKQ 201

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           +D A  +L +M   G +P+ V+Y + ++GLC++G+  +A  M++   +    P+  T++ 
Sbjct: 202 VDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNA 261

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++    +EG++SEA ++  EM+++   P  V  +LLI  LC   ++D A++     ++KG
Sbjct: 262 LIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKG 321

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           C  +VV ++ LI G+C+   +E  + L  +M       +TVTYT +I    + G++  A 
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAE 381

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR-----TAYNQVI 589
           E+   M+  G+ P ++TY  ++H  C  G++E  L +L  M   QK         YN +I
Sbjct: 382 EIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADM---QKSGMDADIVTYNIII 438

Query: 590 ENLCSFGYLEEA 601
             +C  G + +A
Sbjct: 439 RGMCKAGEVADA 450



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 186/373 (49%), Gaps = 2/373 (0%)

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           N F    ++  A   + +M ++G  PD+VT+ +++NGFCR   +  A  M  +M   G +
Sbjct: 124 NCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYE 183

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN V Y   ++GLC + +   A +++N  E +   P+A+TY+ ++ GL   G+  +A  +
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRM 243

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           V  M K+  +P     N LI +  +EG++  A++  +E + +    ++V ++ LI G C 
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCM 303

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
              L+EA  +   M      PD VTY+ +I+   K+ +VE   +L  +M  +G+V   VT
Sbjct: 304 YSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y  +I  YC+ G++    ++ + M+          YN ++  LC  G +E+A  IL  + 
Sbjct: 364 YTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQ 423

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
           ++   AD  T ++++      G    A+ + C +  + L PD+     +   L  +G   
Sbjct: 424 KSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRG 483

Query: 670 EADTLMLRFVERG 682
           EAD L  +  E G
Sbjct: 484 EADALFRKMKEDG 496



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 167/335 (49%), Gaps = 29/335 (8%)

Query: 128 FYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LM 183
            Y  DR     ++P  ++Y  +++ L K+K    A  +L  M   GI  RP+A +Y  L+
Sbjct: 171 LYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGI--RPDAVTYNSLI 228

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
                +G+  +A  ++S M K  + P++   N  I   V   ++++A    E M    + 
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD 288

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+++TY+ LI G C   R+ +A ++   M  KGC PD V+Y  ++   CK K++      
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKV------ 342

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                            E   +L  +MSQ G + + VTYT ++ G+CR G+L+ A+++ +
Sbjct: 343 -----------------EHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFK 385

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M   G  PN ++Y   L+GLC NGK  +A  ++   ++     + +TY++++ G+ + G
Sbjct: 386 WMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAG 445

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
           ++++A D+   +  KG  P       ++  L ++G
Sbjct: 446 EVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKG 480



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 2/220 (0%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+   +S ++  + +  K      +  +M   G        N+L+   CR  ++  A  F
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           + + +  G   ++V F SL+ GFC+   + +AL + D M     +P+ V Y TIID L K
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--A 584
           + +V+ A +L+ +M   G+ P  VTY ++I   C  GR +D  +++  M  ++       
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           +N +I+     G + EA ++  +++R +   D  T  +L+
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLI 298



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 124/264 (46%), Gaps = 2/264 (0%)

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           R  KL ++ D+   MV+    P+  + + L+ ++ +  K D      ++    G   N+ 
Sbjct: 58  RYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
               L+  FC+   L  ALS L  M     +PD VT+ ++++   +  R+ +A  +  +M
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRM 177

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYL 598
           +  G  P VV Y T+I   C+  +V++ L LL +M     +     YN +I  LC+ G  
Sbjct: 178 VEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRW 237

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           ++A +++  + +     D  T + L+++ + +G    A ++   M  R+L PD+     +
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLL 297

Query: 659 SERLILEGKSEEADTLMLRFVERG 682
              L +  + +EA+ +    V +G
Sbjct: 298 IYGLCMYSRLDEAEQMFGFMVSKG 321


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 239/479 (49%), Gaps = 20/479 (4%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L  L + K       + R M   G+ C     + L+        +     VL  + K  
Sbjct: 110 LLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLG 169

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
             P+++  NT I+ L +  ++ +A+  L+ +   G  P V T+  ++ G C + +   AI
Sbjct: 170 FKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAI 229

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFH-- 315
             + +M    C P+ VSY  ++  LCK + + E  DL   M         V  ++L +  
Sbjct: 230 VWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGM 289

Query: 316 -DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
            + G+ ++A  L  +M +    PDVVT++ +V+  C+ G + +A  +  +M     +P+ 
Sbjct: 290 CNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDI 349

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y++ ++G+C +    E+  ++N        P+ +T+S+ +    ++G +SEA  ++  
Sbjct: 350 VTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINL 409

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M+++G  P  V  N L+   C   +MD A+K     +NKGCA +V+++  LI+G+C+   
Sbjct: 410 MIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSER 469

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           ++EA  L D+M      P+++T+TT+I  L + GR   A EL  KM S G  P ++TY T
Sbjct: 470 IDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYST 529

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVI-----ENLCSFGYLEEAGKILGKV 608
           ++  +C+ G +++ L L E +   +K +   N VI       +C  G LE+A ++   +
Sbjct: 530 LLSGFCKHGHLDEALALFEAL---KKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 197/389 (50%), Gaps = 14/389 (3%)

Query: 175 RPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           +P  +++ M+     + GK   A+  +  M +    P ++  +  I  L     + +A+ 
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
               M+  GI+P V+TYN LI G C+  + K A  L  EM      PD V++  ++  LC
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC 325

Query: 293 KEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVV 340
           KE  + E   +  KM         V  S+L H        +E+  L+N+M      PDVV
Sbjct: 326 KEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVV 385

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           T++  V+ FC+ G + +A+ ++  M   G +PN V+Y + ++G C + +  EAR++ +  
Sbjct: 386 TFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIM 445

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
             +   P+ ++Y++++ G  +  ++ EA  +  EM  KG  P  +    LI  LC+ G+ 
Sbjct: 446 VNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRP 505

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             AK+  ++  + GC  +++ +++L+ GFC+ G L+EAL+L + +   +  P+ V    +
Sbjct: 506 YAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKIL 565

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTV 549
           +  + K G++E+A EL   +  + L P V
Sbjct: 566 LGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/505 (23%), Positives = 231/505 (45%), Gaps = 31/505 (6%)

Query: 188 RAGKLRN---AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
           + G   N   A+   + M      P +   N  +  LV        +    +M+  G++ 
Sbjct: 78  KGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSC 137

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           +V T   LI   C LH +     ++ ++   G  P  +++ T++  LC E          
Sbjct: 138 SVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIE---------- 187

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                        GRI EA E ++ +   G  P V T+T +VNG C++G+   A   +++
Sbjct: 188 -------------GRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKK 234

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M    C+P  VSY+  ++ LC N    EA ++         +P  +TY+ +++G+   G+
Sbjct: 235 MVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQ 294

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             +A  + +EM++    P  V  ++L+ +LC+EG +  A     + +      ++V ++S
Sbjct: 295 WKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSS 354

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G C+    +E+ +LL++M      PD VT++  +D   K G V EA  ++  M+ +G
Sbjct: 355 LIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERG 414

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEA 601
           L P VVTY +++  YC   ++++  K+ + M++K  C     +YN +I+  C    ++EA
Sbjct: 415 LRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNK-GCAPDVLSYNILIKGYCKSERIDEA 473

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
            ++  ++       ++ T   L+      G P  A ++  +M +    PDL     +   
Sbjct: 474 KQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSG 533

Query: 662 LILEGKSEEADTLMLRFVERGHIQP 686
               G  +EA  L    +++  ++P
Sbjct: 534 FCKHGHLDEALAL-FEALKKSQLKP 557



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 193/390 (49%), Gaps = 14/390 (3%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA-GKLRN-AM 196
           + P VY   + +    K+ + +  ++ +     ++C PE  SY ++  S    +L N A+
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAV 264

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   M+   ++P ++  N+ I+ +    +  +A    + M    + P+V+T++ L+   
Sbjct: 265 DLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDAL 324

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
           C    + +A+ +  +M      PD V+Y +++  +CK    KE   L+ +M++ +     
Sbjct: 325 CKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDV 384

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  ++F  +G + EA+ ++N M + G  P+VVTY ++++G+C   ++D+A+K+   
Sbjct: 385 VTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDI 444

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M + GC P+ +SY   + G C + +  EA+++ +    +  TPN+IT++ ++ GL + G+
Sbjct: 445 MVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGR 504

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
              A ++ ++M   G  P  +  + L+   C+ G +D A    +         N V    
Sbjct: 505 PYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKI 564

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           L+ G C+ G LE+A  L   + + +  PD 
Sbjct: 565 LLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 148/295 (50%), Gaps = 23/295 (7%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           +W  + D + + ++++ L K  +   A  V   M +  +E     +S L+    ++   +
Sbjct: 307 EWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWK 366

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            +  +L+ M    + P+++  +  + V      +++A   +  M   G+ PNV+TYN L+
Sbjct: 367 ESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLM 426

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            GYC   ++ +A K+ D M  KGC+PD +SY  ++   CK +                  
Sbjct: 427 DGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSE------------------ 468

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                RI+EAK+L ++MS  G  P+ +T+T +++G C+ G    AK++ ++M  HGC P+
Sbjct: 469 -----RIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPD 523

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
            ++Y+  L+G C +G   EA  +    ++    PN +   +++ G+ + GKL +A
Sbjct: 524 LITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDA 578



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 27/239 (11%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           R D + + + +++  K  +   A+ ++ LM  RG+  RP   +Y  LM  Y    ++  A
Sbjct: 381 RPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGL--RPNVVTYNSLMDGYCLHSQMDEA 438

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             V  +M     AP++L  N  I       ++ +A +  + M   G+TPN +T+  LI G
Sbjct: 439 RKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISG 498

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
            C   R   A +L  +M   GC PD ++Y T++   CK                      
Sbjct: 499 LCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCK---------------------- 536

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             G ++EA  L   + +    P+ V    ++ G C+ G+L+ AK++   +     +P+ 
Sbjct: 537 -HGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/184 (17%), Positives = 77/184 (41%), Gaps = 5/184 (2%)

Query: 448 NLLIQSLCREGKM---DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           N  ++  C+ G     D A  +  + ++      +  F  L+    +    +  +S+   
Sbjct: 70  NFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRK 129

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M          T T +I+ L     V     ++ K+   G  P+++T+ T+I+  C  GR
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGR 189

Query: 565 VEDLLKLLEKMLSKQKCRTAYNQ--VIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           + + ++ L+ ++S+    T Y    ++  LC  G    A   + K++    + +  +  +
Sbjct: 190 IVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSI 249

Query: 623 LVES 626
           +++S
Sbjct: 250 IIDS 253


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 248/505 (49%), Gaps = 22/505 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y + ++ L K +    A ++L+ M  +  +C P   +Y  L+    +AG+L  AM 
Sbjct: 75  DYVTYNVFIDGLCKAERVDDAFQLLKKMDEK--KCLPTTVTYTALVDGLLKAGRLDEAMA 132

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M +   +P L      I  L    ++ +A R    M   G  P+   Y  LI G  
Sbjct: 133 ILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLA 192

Query: 258 DLHRIKDAIKLIDEMPLKGCS----PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            + ++ +A+  +++M   GC+    PD V +  V+  LC    +++     +++ +  +L
Sbjct: 193 KIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDL 252

Query: 314 FH-----------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
            H              R EEA   V +MS+  C P + TYT++V+GF ++G LD+A   L
Sbjct: 253 THFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQL 312

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           ++    G  P+ V+YT+ ++GLC  G+  E  E  +      + P+A+TY+ ++ G  + 
Sbjct: 313 KEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKA 372

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
             + +A  V R+M++ G   + V  N+++  LC+ G++  A         +GC   VV +
Sbjct: 373 KMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTY 432

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           ++L+ GFC +G++  A+ L   M     +P+ V+Y  II  L + G++ +A     K+L 
Sbjct: 433 SALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQ 492

Query: 543 KGLVPTVVTYRTVIHRYCQ-VGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLE 599
           + L P V T+ + +H  CQ +  V D ++L E M+S+       +Y+ +++ +C  G LE
Sbjct: 493 RRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLE 552

Query: 600 EAGKILGKVLRTASKADASTCHVLV 624
              +I  +++      D    + L+
Sbjct: 553 VTLEIFHEMVSRGVAPDVVVFNTLI 577



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 224/451 (49%), Gaps = 22/451 (4%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSM 201
           Y ++++ LSK    + A+R+   M   G  CRP+AF Y  L+   ++ GKL  A+  L+ 
Sbjct: 149 YTVVIDGLSKAGRVEEARRIFVDMLGNG--CRPDAFVYTALISGLAKIGKLDEALVYLNQ 206

Query: 202 MQKAAVA----PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           M +   A    P+++I N  I  L     L  AL + + +    +     T+N L+   C
Sbjct: 207 MVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELD-DSLDLTHFTFNPLVAALC 265

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RDLMEKMV 308
              R ++AI  + +M  + C P   +Y +++    K  R+ E          R  +   V
Sbjct: 266 KAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAV 325

Query: 309 NDSNLFHDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             +++       GR+EE  E  ++M   G  PD VTY A+++GF +   + +A ++ +QM
Sbjct: 326 TYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM 385

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G   +TV+Y   L+GLC  G+  EA       EE       +TYS +M G   EG +
Sbjct: 386 LQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNV 445

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
           S A ++ R M+ +G  P  V  N++I+ LCR GK+  A  + ++ L +    +V  F S 
Sbjct: 446 SAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSF 505

Query: 486 IRGFCQKGD-LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           + G CQ+ D + + + L + M      P+  +Y+ ++D + + G +E   E+  +M+S+G
Sbjct: 506 LHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRG 565

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           + P VV + T+I   C  GRV++ L++  ++
Sbjct: 566 VAPDVVVFNTLIRWLCIAGRVDEALEVFREL 596



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 221/483 (45%), Gaps = 55/483 (11%)

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
           + L+    + G+L  AM +L  M     +P+++     I+ L    +L +A   LER   
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
           AG  P+ +TYN  I G C   R+ DA +L+ +M  K C P  V+Y  ++  L K  R+ E
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 300 VRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
              ++E+MV   N                 GR+EEA+ +   M   GC PD   YTA+++
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189

Query: 348 GFCRVGELDQAKKMLQQMYHHGC----KPNTVSYTAFLNGLCHNG--------------- 388
           G  ++G+LD+A   L QM  +GC    +P+ V +   +  LC +G               
Sbjct: 190 GLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDS 249

Query: 389 -------------------KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
                              ++ EA   +    E    P   TY+ ++ G  + G+L EA 
Sbjct: 250 LDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEAL 309

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
             ++E V++GF P  V    +I  LC+ G+++   +   E  N+G   + V + +LI GF
Sbjct: 310 LQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGF 369

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
            +   + +A  +   M        TVTY  I+D L K GRV EA    + M  +G V TV
Sbjct: 370 MKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATV 429

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
           VTY  ++  +C  G V   ++L  +ML +  +    +YN +I  LC  G L +A     K
Sbjct: 430 VTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEK 489

Query: 608 VLR 610
           +L+
Sbjct: 490 LLQ 492



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 223/449 (49%), Gaps = 22/449 (4%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           L+ G C   ++  A+ L+DEMP   CSPD V++  V+  LC+EKR+ E   ++E+ V   
Sbjct: 15  LLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71

Query: 312 --------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                   N+F D      R+++A +L+ +M +  C+P  VTYTA+V+G  + G LD+A 
Sbjct: 72  CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            +L+QM   G  P   +YT  ++GL   G+  EAR +          P+A  Y+ ++ GL
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191

Query: 420 RREGKLSEACDVVREMVK----KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
            + GKL EA   + +MV+    +G  P  V  NL+I+ LC  G ++ A  +  E L+   
Sbjct: 192 AKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE-LDDSL 250

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
            +    F  L+   C+    EEA++ +  M   +  P   TYT+++D   K GR++EA  
Sbjct: 251 DLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALL 310

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
            + + + +G +P  VTY ++I   C++GRVE+  +   +M ++  +     Y  +I+   
Sbjct: 311 QLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 370

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
               + +A ++  ++L++ +     T +++++     G    AY     M  R  +  + 
Sbjct: 371 KAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVV 430

Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERG 682
               + +    EG    A  L  R ++RG
Sbjct: 431 TYSALMDGFCSEGNVSAAVELFRRMLDRG 459



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 188/382 (49%), Gaps = 14/382 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ A  +A +   A+  +  M +    P L    + +   +   +L +AL  L+   
Sbjct: 257 FNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAV 316

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+ +TY  +I G C L R+++  +   EM  +G  PD V+Y  ++    K K I 
Sbjct: 317 ERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIP 376

Query: 299 EVRDLMEKMVNDS--------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           +   +  +M+           N+  D     GR+ EA      M + GC+  VVTY+A++
Sbjct: 377 KAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALM 436

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +GFC  G +  A ++ ++M   GC+PN VSY   + GLC  GK  +A        +    
Sbjct: 437 DGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLC 496

Query: 407 PNAITYSVVMHGL-RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           P+  T++  +HGL +R   + +  ++   MV +G  P     ++L+  +CR G ++   +
Sbjct: 497 PDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLE 556

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
              E +++G A +VV F +LIR  C  G ++EAL +  ++   +  PD  +Y +++DALS
Sbjct: 557 IFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELER-RSAPDAWSYWSLLDALS 615

Query: 526 KNGRVEEATELMMKMLSKGLVP 547
           +  R+EEA  L   M  +G  P
Sbjct: 616 RCERMEEARLLSFHMKLQGCAP 637



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 186/419 (44%), Gaps = 72/419 (17%)

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQM-------------------------------- 365
           D    TA++NG C+ G+LD+A  +L +M                                
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERA 67

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              GC+P+ V+Y  F++GLC   +  +A +++   +E+   P  +TY+ ++ GL + G+L
Sbjct: 68  VRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 127

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA  ++ +MV+KG  PT     ++I  L + G+++ A++   + L  GC  +   +T+L
Sbjct: 128 DEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTAL 187

Query: 486 IRGFCQKGDLEEALSLLDDMY--LCKK--DPDTV-------------------------- 515
           I G  + G L+EAL  L+ M    C +  +PD V                          
Sbjct: 188 ISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELD 247

Query: 516 --------TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
                   T+  ++ AL K  R EEA   + KM  +   PT+ TY +++  + ++GR+++
Sbjct: 248 DSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDE 307

Query: 568 LLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            L  L++ + +     A  Y  +I+ LC  G +EE  +   ++     + DA T   L++
Sbjct: 308 ALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALID 367

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
            ++   +   A++V  +M     +        + + L   G+  EA    L   ERG +
Sbjct: 368 GFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCV 426



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 23/296 (7%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R   Y  D + Y  +++   K K+   A RV R M + G       ++ ++    +AG++
Sbjct: 351 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 410

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A      M++      ++  +  +        ++ A+    RM   G  PN+++YN +
Sbjct: 411 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 470

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I+G C   ++  A    +++  +   PD  ++ + +  LC  +R+  V D          
Sbjct: 471 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLC--QRLDTVGD---------- 518

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                       EL   M   G  P++ +Y+ +++G CR G L+   ++  +M   G  P
Sbjct: 519 ----------GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAP 568

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           + V +   +  LC  G+  EA E+    E     P+A +Y  ++  L R  ++ EA
Sbjct: 569 DVVVFNTLIRWLCIAGRVDEALEVFRELERR-SAPDAWSYWSLLDALSRCERMEEA 623


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 247/521 (47%), Gaps = 35/521 (6%)

Query: 159 GAKRVLRLMARRGIECRP--EAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
           G   V RL   R + C P  + F+Y  L++ Y R   +  A  V  +M +     N +  
Sbjct: 203 GNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSY 258

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
              IH L    KL +AL F  RM+  G  P V TY  L+   C+  R  +A+ L  EM  
Sbjct: 259 TNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRE 318

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
           +GC P+  +Y  ++ YLCKE                       GR++EA +++N+M + G
Sbjct: 319 RGCEPNVYTYTVLIDYLCKE-----------------------GRMDEALKMLNEMVEKG 355

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE-A 393
             P VV + A++  +C+ G ++ A  +L  M      PN  +Y   + G C  GKS++ A
Sbjct: 356 VAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCR-GKSMDRA 414

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
             ++N   E   +P+ +TY+ ++HGL   G +  A  + R M++ GF P     N  +  
Sbjct: 415 MALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVC 474

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           LCR G++  A + ++    K    N   +T+LI G+C+ G +E A SL   M   +  P+
Sbjct: 475 LCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPN 534

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
           ++T+  +ID L K G+V++A  L+  M    + PT+ TY  ++    +    +   ++L 
Sbjct: 535 SITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILN 594

Query: 574 KMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +++S   Q     Y   I+  CS G LEEA +++ K+       D+   ++L+ +Y   G
Sbjct: 595 RLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMG 654

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
           +   A+ V  RMF     P       + + L++E   +E  
Sbjct: 655 LLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGS 695



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 152/606 (25%), Positives = 272/606 (44%), Gaps = 42/606 (6%)

Query: 88  RSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMM 147
           R  W  + +  L+ L+ SL P  +C++     D   AL FF W  R   + H    ++ +
Sbjct: 35  RPRW--RKDPSLKTLIPSLTPSLLCSLFNLNPDPLTALNFFRWIRRHHNFPHSLATHHSL 92

Query: 148 LEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR---NAMYVLSMMQK 204
           L +L + +  + A+ V   M +      P   ++L+    R        +  + L+    
Sbjct: 93  LLLLVRHRTLRAAENVRNSMIKSCTS--PHDATFLLNLLRRMNTAAAAADHQHQLAFKLS 150

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
                 LL+C +   ++   +++    + +       + PN++T N ++  YC L  +  
Sbjct: 151 LTSYNRLLMCLSRFSMV---DEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAV 207

Query: 265 AIKLIDEMPLKGCSPDKVSYYT-VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
           A      +      PD  +Y + V+GY C+               ND         +E A
Sbjct: 208 ARLFFVRILRCEPGPDLFTYTSLVLGY-CR---------------NDD--------VERA 243

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
             +   M +     + V+YT +++G C  G+L +A +   +M   GC P   +YT  +  
Sbjct: 244 CGVFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCA 299

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           LC +G+ LEA  +     E    PN  TY+V++  L +EG++ EA  ++ EMV+KG  P+
Sbjct: 300 LCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPS 359

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V  N LI S C+ G M+ A   +    +K    NV  +  LI GFC+   ++ A++LL+
Sbjct: 360 VVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLN 419

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
            M   K  PD VTY T+I  L + G V+ A+ L   M+  G  P   T+   +   C++G
Sbjct: 420 KMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMG 479

Query: 564 RVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           RV +  ++LE +  K  +    AY  +I+  C  G +E A  +  ++L      ++ T +
Sbjct: 480 RVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFN 539

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
           V+++    +G    A  +   M   ++ P L     + E ++ E   + A+ ++ R +  
Sbjct: 540 VMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISS 599

Query: 682 GHIQPK 687
           G+ QP 
Sbjct: 600 GY-QPN 604



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/513 (22%), Positives = 228/513 (44%), Gaps = 54/513 (10%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y ++++ L K      A ++L  M  +G+      F+ L+ +Y + G + +A+ VL +M
Sbjct: 327 TYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLM 386

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
           +   V PN+   N  I     G  + +A+  L +M  + ++P+V+TYN LI G C++  +
Sbjct: 387 ESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVV 446

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
             A +L   M   G SPD+ ++   M  LC+                        GR+ E
Sbjct: 447 DSASRLFRLMIRDGFSPDQWTFNAFMVCLCR-----------------------MGRVGE 483

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A +++  + +     +   YTA+++G+C+ G+++ A  + ++M    C PN++++   ++
Sbjct: 484 AHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMID 543

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GL   GK  +A  ++    +    P   TY++++  + +E     A +++  ++  G+ P
Sbjct: 544 GLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQP 603

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V     I++ C +G+++ A++ + +  N+G  ++   +  LI  +   G L+ A  +L
Sbjct: 604 NVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVL 663

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEA----------------------------- 533
             M+    +P  +TY+ ++  L      +E                              
Sbjct: 664 RRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGIT 723

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIEN 591
           T L  KM   G VP + TY  +I+  C+VGR+     L   M           +N ++ +
Sbjct: 724 TVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSS 783

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
            C  G   EA  +L  ++  +  A   +  +L+
Sbjct: 784 CCKLGMFGEAVTLLDSMMECSHLAHLESYKLLI 816



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/446 (22%), Positives = 194/446 (43%), Gaps = 41/446 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++  L +  +   A R+ RLM R G       F+  MV   R G++  A  +L
Sbjct: 429 DVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQIL 488

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +++  V  N       I       K+  A    +RM      PN +T+N +I G    
Sbjct: 489 ESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKE 548

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            +++DA+ L+++M      P   +Y  ++  + KE       +++ ++++          
Sbjct: 549 GKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTY 608

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                 +  QGR+EEA+E+V ++   G + D   Y  ++N +  +G LD A  +L++M+ 
Sbjct: 609 TAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFG 668

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREM---------INTSEEEWWT------------ 406
            GC+P+ ++Y+  +  L       E             I+    + W+            
Sbjct: 669 TGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFE 728

Query: 407 --------PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                   PN  TYS +++GL + G+L+ A  +   M + G  P+ +  N L+ S C+ G
Sbjct: 729 KMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLG 788

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
               A   +   +      ++ ++  LI G  ++ + E+A ++   +  C  + D V + 
Sbjct: 789 MFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWK 848

Query: 519 TIIDALSKNGRVEEATELMMKMLSKG 544
            +ID L+K G V++ +EL+  M   G
Sbjct: 849 VLIDGLAKTGYVDQCSELLNLMEKNG 874



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 167/376 (44%), Gaps = 46/376 (12%)

Query: 155 KLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
           K+   A    R++A    EC P +  F+ ++    + GK+++AM ++  M K  V P L 
Sbjct: 515 KIEHAASLFKRMLAE---ECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLH 571

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA----IKL 268
             N  +  ++      +A   L R+  +G  PNV+TY   IK YC   R+++A    IK+
Sbjct: 572 TYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKI 631

Query: 269 IDEMPL-------------------------------KGCSPDKVSYYTVMGYLCKEKRI 297
            +E  L                                GC P  ++Y  +M +L  EK  
Sbjct: 632 KNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHK 691

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKE------LVNQMSQMGCIPDVVTYTAVVNGFCR 351
           KE  + +   V+ +N+  D   I    +      L  +M++ GC+P++ TY+ ++NG C+
Sbjct: 692 KEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCK 751

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
           VG L+ A  +   M   G  P+ + + + L+  C  G   EA  ++++  E     +  +
Sbjct: 752 VGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLES 811

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y +++ GL  +    +A  V   +++ G+    V   +LI  L + G +D   + +    
Sbjct: 812 YKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLME 871

Query: 472 NKGCAVNVVNFTSLIR 487
             GC ++   ++ L++
Sbjct: 872 KNGCRLHPETYSMLMQ 887



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/287 (20%), Positives = 114/287 (39%), Gaps = 39/287 (13%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  +Y +++       L   A  VLR M   G  C P   +Y ++             V+
Sbjct: 639 DSFIYNLLINAYGCMGLLDSAFGVLRRMF--GTGCEPSYLTYSILM---------KHLVI 687

Query: 200 SMMQKAAVAP---NLLICNTAIHVLVVGNKLAKALR--FLERMQLAGITPNVLTYNCLIK 254
              +K    P   ++ + N ++    + +K+   +     E+M   G  PN+ TY+ LI 
Sbjct: 688 EKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLIN 747

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G C + R+  A  L   M   G SP ++ + +++   CK     E   L++ M+  S+L 
Sbjct: 748 GLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLA 807

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
           H +                       +Y  ++ G       ++A+ +   +   G   + 
Sbjct: 808 HLE-----------------------SYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDE 844

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           V++   ++GL   G   +  E++N  E+     +  TYS++M  L R
Sbjct: 845 VAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNR 891


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 247/509 (48%), Gaps = 41/509 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + + +ML+   +  + + A+ ++  M + G     E+++  ++   R GKL     VL  
Sbjct: 294 VTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDE 353

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  + PN+   N  +  L   + +  A R ++ M   G+ P+ +TY  L+ GYC   +
Sbjct: 354 MVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGK 413

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
           + +A  +++EM  KGC P+  +  T++  L KE R  E  ++++KM   S          
Sbjct: 414 VFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNI 473

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGC----------------------IPDVVTYTAVVN 347
             N     G +E+A E+V++M   G                       +PDV+TYT ++N
Sbjct: 474 VVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLIN 533

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G C+VG+L++AKK   +M      P++V+Y  F+   C  GK   A  ++   E    + 
Sbjct: 534 GLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSK 593

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
              TY+ ++ GL  +G++ E   ++ EM ++G  P     N +I  LC  GK   A   +
Sbjct: 594 TLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLL 653

Query: 468 QECLNKG-CAVNVVNFTSLIRGFCQKGDLEEALSLLD-DMYLCKKDPDTVTYTTIIDALS 525
            E L+KG  + NV +F  LI+ FC+ GD + A  L D  + +C        Y+ + + L 
Sbjct: 654 HEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKE--ALYSLMFNELL 711

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RT 583
             G++ +A EL    L + L+     Y  +I + C+ GR++D   LL+K++ K  C   +
Sbjct: 712 AGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHS 771

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           ++  VI+ L   G  ++A + LG+++  A
Sbjct: 772 SFIPVIDGLSKRGNKQQADE-LGRIMELA 799



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 246/533 (46%), Gaps = 45/533 (8%)

Query: 197 YVLSM---MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
           YV S+   M +  V P     N  I  L   N L  A    ++M   G  PN  T   L+
Sbjct: 134 YVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILV 193

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---- 309
           +G+C   R K A++ +D     G + ++V Y T++   CK+    E   L+E+M      
Sbjct: 194 RGFCRAGRTKQALEFVDGK--MGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLL 251

Query: 310 -DSNLFHDQ-------GRIEEAKELVNQMSQMGCI----PDVVTYTAVVNGFCRVGELDQ 357
            D   F+ +       G++ EA  +   M   G +    P+VVT+  ++ GFC+ G +++
Sbjct: 252 PDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEE 311

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A+ +++ M   G   +  SY  +L GL  NGK LE R +++   E    PN  +Y++VM 
Sbjct: 312 ARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMD 371

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           GL R   + +A  ++  MV  G +P  V    L+   C +GK+  AK  + E + KGC  
Sbjct: 372 GLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHP 431

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           N     +L+    ++G   EA  +L  M       DTVT   +++ L +NG +E+A+E++
Sbjct: 432 NTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVV 491

Query: 538 MKMLSKGL----------------------VPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            +M + G                       VP V+TY T+I+  C+VG++E+  K   +M
Sbjct: 492 SEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEM 551

Query: 576 LSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           ++K        Y+  + N C  G +  A ++L  + R        T + L+    +KG  
Sbjct: 552 MAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQI 611

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
              Y +   M  R + PD+     +   L   GK+++A +L+   +++G + P
Sbjct: 612 FEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSP 664



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 172/364 (47%), Gaps = 14/364 (3%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           Q R      L   M Q G  P+  T+  ++   C    LD A+++  +M   GC+PN  +
Sbjct: 129 QNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFT 188

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
               + G C  G++ +A E ++   +     N + Y+ ++    ++    EA  +V  M 
Sbjct: 189 VGILVRGFCRAGRTKQALEFVDG--KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMT 246

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG----CAVNVVNFTSLIRGFCQK 492
           +KG  P  V  N  I +LCR GK+  A +  ++    G       NVV F  +++GFCQ+
Sbjct: 247 EKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQE 306

Query: 493 GDLEEALSLLDDMYLCKKDPDTV---TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           G +EEA SL++ M   KK  + V   +Y T +  L +NG++ E   ++ +M+  G+ P +
Sbjct: 307 GMMEEARSLVETM---KKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNI 363

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGK 607
            +Y  V+   C+   + D  +L++ M+S         Y  ++   CS G + EA  IL +
Sbjct: 364 YSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNE 423

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           ++R     +  TC+ L+ S   +G    A ++  +M  ++   D   C  V   L   G+
Sbjct: 424 MIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGE 483

Query: 668 SEEA 671
            E+A
Sbjct: 484 LEKA 487



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 182/410 (44%), Gaps = 42/410 (10%)

Query: 140 DPIVYYMMLE-ILSKTKLCQGAKRVLRLMARRGIECRPEAFS--YLMVAYSRAGKLRNAM 196
           D + Y  +L    SK K+ + AK +L  M R+G  C P  ++   L+ +  + G+   A 
Sbjct: 397 DTVTYTTLLHGYCSKGKVFE-AKAILNEMIRKG--CHPNTYTCNTLLNSLWKEGRKSEAE 453

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT------------- 243
            +L  M + +   + + CN  ++ L    +L KA   +  M   G               
Sbjct: 454 EMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVN 513

Query: 244 ---------PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
                    P+V+TY  LI G C + ++++A K   EM  K   PD V+Y T +   CK+
Sbjct: 514 SIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQ 573

Query: 295 KRIKEV--------RDLMEKMVNDSNLF----HDQGRIEEAKELVNQMSQMGCIPDVVTY 342
            +I           R+   K +   N        +G+I E   L+++M + G  PD+ TY
Sbjct: 574 GKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTY 633

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGC-KPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
             ++N  C  G+   A  +L +M   G   PN  S+   +   C +G    A E+ + + 
Sbjct: 634 NNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVAL 693

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                  A+ YS++ + L   GKLS+A ++    +++           LI  LC++G++D
Sbjct: 694 SVCGHKEAL-YSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLD 752

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
            A   +Q+ ++KG   +  +F  +I G  ++G+ ++A  L   M L  +D
Sbjct: 753 DAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIMELALED 802


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 229/489 (46%), Gaps = 19/489 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +LR M R G    P AFSY  ++    RAG+  +A+ V   M + AV PN +  NT 
Sbjct: 46  AVGMLRRMGRDGAP-PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 104

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I   + G  L    R  ++M   G+ PN +TYN L+ G C   R+ +   L+DEM  +  
Sbjct: 105 IDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 164

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKE 325
            PD  +Y  +   L +    K +  L  K + +     D             G++  A+E
Sbjct: 165 VPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEE 224

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++  +   G +P  V Y  ++NG+C+ GEL+ A     QM     KP+ ++Y A +NGLC
Sbjct: 225 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 284

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
              +   A++++   ++    P   T++ ++    R G+L +   V+ EM + G  P  V
Sbjct: 285 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 344

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               ++ + C+ GK+  A   + +  +K    N   + ++I  + + G  ++A  L++ M
Sbjct: 345 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 404

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P  VTY  +I  L    ++ EA E++  + +  L+P  V+Y T+I   C  G +
Sbjct: 405 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 464

Query: 566 EDLLKLLEKMLS---KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           +  L L ++M     K   RT Y+Q+I  L   G L E   +  K+++       +  ++
Sbjct: 465 DKALDLQQRMHKYGIKSTVRT-YHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNI 523

Query: 623 LVESYLNKG 631
           +VE+Y   G
Sbjct: 524 MVEAYSKYG 532



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 203/430 (47%), Gaps = 31/430 (7%)

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP-DKVSYYTVMGYLCKEKRIK 298
           AG  P+   +N  ++       + +A+ ++  M   G  P +  SY  V+  + +     
Sbjct: 21  AGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRA---- 76

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                              GR  +A E+ ++M++   +P+ +TY  +++G  + G+L+  
Sbjct: 77  -------------------GRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 117

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            ++  QM  HG KPN ++Y   L+GLC  G+  E   +++    +   P+  TYS++  G
Sbjct: 118 FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 177

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L R G       +  + +K G        ++L+  LC++GK+  A++ +Q  +N G    
Sbjct: 178 LSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT 237

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            V + +LI G+CQ G+LE A S    M      PD +TY  +I+ L K  R+  A +L+M
Sbjct: 238 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLM 297

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
           +M   G+ PTV T+ T+I  Y + G++E    +L +M     +    +Y  ++   C  G
Sbjct: 298 EMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 357

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            + EA  IL  +       +A   + ++++Y+  G    A+ +  +M +  + P +    
Sbjct: 358 KIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI---- 413

Query: 657 KVSERLILEG 666
            V+  L+++G
Sbjct: 414 -VTYNLLIKG 422



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 156/361 (43%), Gaps = 3/361 (0%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC-KPNTVS 376
           GR  + +     ++  G  PD   +   V      G+L +A  ML++M   G   PN  S
Sbjct: 6   GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 65

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   + G+   G+  +A E+ +   E    PN ITY+ ++ G  + G L     +  +MV
Sbjct: 66  YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
             G  P  +  N+L+  LCR G+M      + E  ++    +   ++ L  G  + GD +
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 185

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
             LSL              T + +++ L K+G+V  A E++  +++ GLVPT V Y T+I
Sbjct: 186 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 245

Query: 557 HRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           + YCQ G +E       +M S+  +     YN +I  LC    +  A  +L ++      
Sbjct: 246 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 305

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
               T + L+++Y   G     + V   M    L P++     +       GK  EA  +
Sbjct: 306 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 365

Query: 675 M 675
           +
Sbjct: 366 L 366



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/455 (22%), Positives = 182/455 (40%), Gaps = 86/455 (18%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           + + I Y ++L  L +         +L  MA +  +  P+ F+Y  L    SR G  +  
Sbjct: 130 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQ--KMVPDGFTYSILFDGLSRNGDSKAM 187

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + +     K  V      C+  ++ L    K++ A   L+ +  AG+ P  + YN LI G
Sbjct: 188 LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 247

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---- 311
           YC    ++ A     +M  +   PD ++Y  ++  LCK +RI   +DL+ +M ++     
Sbjct: 248 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 307

Query: 312 --------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   + +   G++E+   ++++M + G  P+VV+Y ++VN FC+ G++ +A  +L 
Sbjct: 308 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 367

Query: 364 QMYH-----------------------------------HGCKPNTVSYTAFLNGLCHNG 388
            M+H                                   +G  P+ V+Y   + GLC+  
Sbjct: 368 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 427

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EA E+IN+       P+A++Y+ ++           AC                   
Sbjct: 428 QISEAEEIINSLSNHRLIPDAVSYNTLI----------SAC------------------- 458

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
                 C  G +D A    Q     G    V  +  LI G    G L E   L   M   
Sbjct: 459 ------CYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQN 512

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
              P    +  +++A SK G   +A +L  +ML K
Sbjct: 513 NVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 143/308 (46%), Gaps = 26/308 (8%)

Query: 134 QWRYRH---DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
           Q + RH   D I Y  ++  L K +    A+ +L  M   G+    E F+ L+ AY R G
Sbjct: 263 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 322

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L     VLS MQ+  + PN++   + ++      K+ +A+  L+ M    + PN   YN
Sbjct: 323 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 382

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            +I  Y +      A  L+++M   G SP  V+Y  ++  LC                  
Sbjct: 383 AIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC------------------ 424

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                +Q +I EA+E++N +S    IPD V+Y  +++  C  G +D+A  + Q+M+ +G 
Sbjct: 425 -----NQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 479

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           K    +Y   ++GL   G+  E   +     +    P+   +++++    + G   +A D
Sbjct: 480 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 539

Query: 431 VVREMVKK 438
           + +EM++K
Sbjct: 540 LRKEMLQK 547


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 154/605 (25%), Positives = 272/605 (44%), Gaps = 64/605 (10%)

Query: 51  DSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQ 110
           D+++K     E +R+ V +           +C ++E    W P +E  L       +P  
Sbjct: 55  DNYEKNEAKVEGMRKTVYD-----------LCGVLE-NGLWGPDVEEALNVFDEMSQPEV 102

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           I  V++   D  VA Q+F W +R+ +  H P VY   L ++++T+     +++L  M+  
Sbjct: 103 IVGVMKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVA 162

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G          L+ ++ ++ KL+ A  V+ MM+K    P      T I  L   N+    
Sbjct: 163 GFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPM 222

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID-------------------- 270
           L    +MQ  G   NV  +  L++ +    RI  A+ L+D                    
Sbjct: 223 LTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDC 282

Query: 271 ---------------EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-- 313
                          EM  +G  PD V+Y T++G LCK +R+ E  +L E++  + ++  
Sbjct: 283 FGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPC 342

Query: 314 ----------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                     +   G+ +EA  L+ +  + GCIP V+ Y  ++    R G++++A ++  
Sbjct: 343 VYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHD 402

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M      PN  +Y   ++ LC  G+   A ++ +T +E    PN +T ++++  L +  
Sbjct: 403 EM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQ 461

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           KL EAC +   +  K   P       LI  L R G++D A    ++ L+     NVV +T
Sbjct: 462 KLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYT 521

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           SLI+ F + G  E+   +  +M      PD +   + +D + K G VE+   L  ++ ++
Sbjct: 522 SLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQ 581

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEE 600
           GLVP V +Y  +IH   + G   +  KL  +M  +Q       AYN VI+  C  G +++
Sbjct: 582 GLVPDVRSYSILIHGLVKAGFSRETYKLFYEM-KEQGLHLDVLAYNTVIDGFCKSGKVDK 640

Query: 601 AGKIL 605
           A ++L
Sbjct: 641 AYQLL 645



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 231/487 (47%), Gaps = 28/487 (5%)

Query: 132 DRQWRYRH---------DPIVYYMMLEILSKTK-LCQGAKRVLRLMARRGIECRPEAFSY 181
           D  W++ H         D + Y  ++ +L K + L +  +    L   R + C   A++ 
Sbjct: 290 DMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPC-VYAYNT 348

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           +++ Y  AGK   A  +L   ++    P+++  N  +  L    K+ +ALR  + M+   
Sbjct: 349 MIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QD 407

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             PN+ TYN LI   C    ++ A+K+ D M   G  P+ ++   ++  LCK +++ E  
Sbjct: 408 AAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEAC 467

Query: 302 DLMEKMVN-----DSNLF-------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            +   + +     DS  F         +GR+++A  L  +M     IP+VV YT+++  F
Sbjct: 468 SIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNF 527

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
            + G  +   K+ ++M H GC P+ +   ++++ +   G+  + R +    + +   P+ 
Sbjct: 528 FKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDV 587

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            +YS+++HGL + G   E   +  EM ++G     +  N +I   C+ GK+D A + ++E
Sbjct: 588 RSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEE 647

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              KG    VV + S++ G  +   L+EA  L ++      D + V Y+++ID   K GR
Sbjct: 648 MKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGR 707

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYN 586
           ++EA  ++ +++ KGL P   T+  ++    +   +++     + M    KC      Y+
Sbjct: 708 IDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNM-KNLKCSPNAMTYS 766

Query: 587 QVIENLC 593
            +I  LC
Sbjct: 767 IMINGLC 773



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/518 (24%), Positives = 241/518 (46%), Gaps = 54/518 (10%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +L    R+G  C P   +Y  ++    R GK+  A+ +   M++ A APNL   N  
Sbjct: 362 AYSLLERQKRKG--CIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNIL 418

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I +L    +L  AL+  + M+ AG+ PN++T N +I   C   ++ +A  +   +  K C
Sbjct: 419 IDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVC 478

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKE 325
           SPD  ++ +++  L +  R+ +   L EKM++   +            F   GR E+  +
Sbjct: 479 SPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHK 538

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           +  +M   GC PD++   + ++   + GE+++ + + +++   G  P+  SY+  ++GL 
Sbjct: 539 IYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLV 598

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G S E  ++    +E+    + + Y+ V+ G  + GK+ +A  ++ EM  KG  PT V
Sbjct: 599 KAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVV 658

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               ++  L +  ++D A    +E  + G  +NVV ++SLI GF + G ++EA  +L+++
Sbjct: 659 TYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEEL 718

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEAT------------------ELMM--------- 538
                 P++ T+  ++DAL K   ++EA                    +M+         
Sbjct: 719 MQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKF 778

Query: 539 --------KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQV 588
                   +M  +GL P  +TY T+I    + G V +   L ++  +         YN +
Sbjct: 779 NKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAM 838

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           IE L S     +A  +  +      + ++ TC VL+++
Sbjct: 839 IEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDA 876



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 239/540 (44%), Gaps = 55/540 (10%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           +RQ R    P  I Y  +L  L +    + A R+   M R+        ++ L+    +A
Sbjct: 367 ERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKA 425

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL--------------- 234
           G+L  A+ V   M++A + PN++  N  I  L    KL +A                   
Sbjct: 426 GELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTF 485

Query: 235 --------------------ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
                               E+M  +   PNV+ Y  LI+ +    R +D  K+  EM  
Sbjct: 486 CSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVH 545

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK-----MVND----SNLFHD---QGRIEE 322
           +GCSPD +   + M  + K   +++ R L E+     +V D    S L H     G   E
Sbjct: 546 RGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRE 605

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
             +L  +M + G   DV+ Y  V++GFC+ G++D+A ++L++M   G +P  V+Y + ++
Sbjct: 606 TYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVD 665

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GL    +  EA  +   ++      N + YS ++ G  + G++ EA  ++ E+++KG  P
Sbjct: 666 GLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 725

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
                N L+ +L +  ++D A+   Q   N  C+ N + ++ +I G C      +A    
Sbjct: 726 NSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFW 785

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
            +M      P+ +TYTT+I  L+K G V EA  L  +  + G VP    Y  +I      
Sbjct: 786 QEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSA 845

Query: 563 GRVEDLLKLLEKMLSKQKCRTAYNQ---VIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            +  D   + E+   K  CR        +++ L     LE+A  I+G VLR  +K+  +T
Sbjct: 846 NKAMDAYIVFEETRLK-GCRVNSKTCVVLLDALHKADCLEQAA-IVGAVLREMAKSQHAT 903



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 141/303 (46%), Gaps = 1/303 (0%)

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
           ++++ +MS  G          +V  F +  +L +A  +++ M     +P   +YT  +  
Sbjct: 153 EQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGA 212

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           L    +      + +  +E  +  N   ++ ++    REG++  A  ++ EM    F   
Sbjct: 213 LSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTAD 272

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V  N+ I    + GK+D A KF  E   +G   + V +T+LI   C+   L+EA+ L +
Sbjct: 273 LVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFE 332

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           ++ L +  P    Y T+I      G+ +EA  L+ +   KG +P+V+ Y  ++    + G
Sbjct: 333 ELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKG 392

Query: 564 RVEDLLKLLEKMLSKQKCR-TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           +VE+ L++ ++M        T YN +I+ LC  G LE A K+   +       +  T ++
Sbjct: 393 KVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNI 452

Query: 623 LVE 625
           +++
Sbjct: 453 MID 455


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 159/606 (26%), Positives = 266/606 (43%), Gaps = 59/606 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D   Y ++L+ L        A  +LR+MA  G  C P   +Y  V   + + G +  A  
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACD 240

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  + P+L+  N+ +H L     + KA  FL +M    + PN  TYN LI GY 
Sbjct: 241 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 300

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------- 307
              + K+A+++  EM      PD V+   +MG LCK  +IKE RD+ + M          
Sbjct: 301 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360

Query: 308 ---------------VNDSNLFH----------------------DQGRIEEAKELVNQM 330
                          V+ ++LF                       + G +++A  + N+M
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              G  PDVVTY  V+   CR+G++D A +   QM   G  P+  +Y   + G C +G  
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 480

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
           L+A+E+I+         + + +S +++ L + G++ +A ++    V  G  P  V  ++L
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSML 540

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           +   C  GKM+ A +     ++ G   NVV + +L+ G+C+ G ++E LSL  +M     
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 600

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED--- 567
            P T+ Y+ IID L + GR   A     +M   G+   + TY  V+ R     R  D   
Sbjct: 601 KPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVL-RGLFKNRCFDEAI 659

Query: 568 -LLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            L K L  M  K    T  N +I+ +     +EEA  +   + R+       T  +++ +
Sbjct: 660 FLFKELRAMNVKINIIT-LNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITN 718

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
            + +G+   A  +   M N    P+ +L   V   L+ + +   A   + +  ER     
Sbjct: 719 LIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNF--- 775

Query: 687 KSEEHL 692
            S EHL
Sbjct: 776 -SLEHL 780



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 207/485 (42%), Gaps = 62/485 (12%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           ++P   TY  L+      HR + A+    ++   G   + +    ++   C+ KR  E  
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
           D+                      L+++  ++GC+PDV +Y+ ++   C  G+  QA  +
Sbjct: 167 DI----------------------LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 204

Query: 362 LQQMYHHG--CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH-- 417
           L+ M   G  C PN V+Y   ++G    G   +A ++     +    P+ +TY+ V+H  
Sbjct: 205 LRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHAL 264

Query: 418 ---------------------------------GLRREGKLSEACDVVREMVKKGFFPTP 444
                                            G    G+  EA  V +EM +    P  
Sbjct: 265 CKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDV 324

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V +++L+ SLC+ GK+  A+        KG   +V ++  ++ G+  KG L +   L D 
Sbjct: 325 VTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDL 384

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      PD  T+  +I A +  G +++A  +  +M   G+ P VVTYRTVI   C++G+
Sbjct: 385 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 444

Query: 565 VEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           ++D ++   +M+ +     + AYN +I+  C+ G L +A +++ +++      D      
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 504

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++ +    G  + A  +     N  L PD  +   + +   L GK E+A  +    V  G
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564

Query: 683 HIQPK 687
            I+P 
Sbjct: 565 -IEPN 568



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 153/347 (44%), Gaps = 23/347 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           AK ++  +   G+      FS ++    + G++ +A  +  +     + P+ ++ +  + 
Sbjct: 483 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMD 542

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
              +  K+ KALR  + M  AGI PNV+ Y  L+ GYC + RI + + L  EM  +G  P
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKP 602

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
             + Y  ++                        LF   GR   AK   ++M++ G   D+
Sbjct: 603 STILYSIII----------------------DGLFQ-AGRTVPAKVKFHEMTESGIAMDI 639

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            TY  V+ G  +    D+A  + +++     K N ++    ++G+    +  EA+++  +
Sbjct: 640 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFAS 699

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
                  P+ +TYS+++  L +EG + EA D+   M   G  P    +N +++ L ++ +
Sbjct: 700 ISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 759

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +  A  ++ +   +  ++  +    L+  F  KG   E +  L   Y
Sbjct: 760 IVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFLPAKY 806


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 260/561 (46%), Gaps = 53/561 (9%)

Query: 176 PEAFSY-LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
           P+ FSY L+  + + G++  A  +   M +  V P +LICN+ I  L    ++ KA   +
Sbjct: 47  PDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIV 106

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCK 293
           ++M  +GI P++ TY+ +I G C    +  A +++++M   G  P+ ++Y +++ GY   
Sbjct: 107 QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSIS 166

Query: 294 EKRIKEVRDLME-------KMVNDSNLF----HDQGRIEEAKELVNQMSQMGCIPDVVTY 342
               + VR   +         V++ N F       GR  EAK + + M   G  PD+++Y
Sbjct: 167 GMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISY 226

Query: 343 TA-------------------------------------VVNGFCRVGELDQAKKMLQQM 365
           +                                      ++N + R G +D+A  + + M
Sbjct: 227 STMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 286

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
            + G  P+TV++   ++ LC  G+  +A    N   +    P+   Y  ++ G    G+L
Sbjct: 287 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGEL 346

Query: 426 SEACDVVREMVKKGFFPTPVE-INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
            +A +++ EM+ K   P  V+  + +I +LC+EG++   K  M   +  G   NVV F S
Sbjct: 347 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 406

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L+ G+C  G++EEA +LLD M     +P+   Y T++D   KNGR+++A  +   ML KG
Sbjct: 407 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 466

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAG 602
           + PT V Y  ++H   Q  R     K+  +M+      +   Y  V+  LC     +EA 
Sbjct: 467 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 526

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
            +L K+     K D  T ++++ +    G    A ++   +    L+P+++    +   L
Sbjct: 527 MLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 586

Query: 663 ILEGKSEEADTLMLRFVERGH 683
           I E   EEAD L +   + GH
Sbjct: 587 IKEESYEEADNLFISVEKSGH 607



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 216/469 (46%), Gaps = 54/469 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y ++++ L K+K    A+RVL  M   G   RP + +Y  L+  YS +G    ++ 
Sbjct: 117 DLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGT--RPNSITYNSLIHGYSISGMWNESVR 174

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   M    V P +  CN+ IH L    +  +A    + M L G  P++++Y+ ++ GY 
Sbjct: 175 VFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYA 234

Query: 258 --------DLHRIKD-----------------------------AIKLIDEMPLKGCSPD 280
                   D+H I +                             A+ + ++M  KG  PD
Sbjct: 235 TATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 294

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVN----DSNLFH--------DQGRIEEAKELVN 328
            V++ TV+  LC+  R+ +       MV+     S   +        + G + +AKEL++
Sbjct: 295 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 354

Query: 329 QMSQMGCIPDVVTY-TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           +M      P  V Y ++++N  C+ G + + K ++  M   G +PN V++ + + G C  
Sbjct: 355 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 414

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G   EA  +++        PN   Y  ++ G  + G++ +A  V R+M+ KG  PT V  
Sbjct: 415 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 474

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           ++++  L +  +   AKK   E +  G  V++  +  ++ G C+    +EA  LL+ ++ 
Sbjct: 475 SIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 534

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
                D +T+  +I A+ K GR +EA EL   + + GLVP + TY  +I
Sbjct: 535 MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMI 583



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/485 (22%), Positives = 222/485 (45%), Gaps = 65/485 (13%)

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P + TYN LI  Y  +HR    + ++  +   G  PD  SY  + G+         V+D 
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGF---------VKD- 61

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                         G +++A  L  +M + G +P ++   +++   C++ E+D+A+ ++Q
Sbjct: 62  --------------GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQ 107

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   G  P+  +Y+  ++GLC +    +A  ++    E    PN+ITY+ ++HG    G
Sbjct: 108 KMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISG 167

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
             +E+  V ++M   G  PT    N  I +L + G+ + AK      + KG   ++++++
Sbjct: 168 MWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYS 227

Query: 484 SLIRGFCQKGD--LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +++ G+    D  L +  ++ + M      P+   +  +I+A ++ G +++A  +   M 
Sbjct: 228 TMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQ 287

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLL-------------------------------- 569
           +KG++P  VT+ TVI   C++GR++D L                                
Sbjct: 288 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELV 347

Query: 570 ---KLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
              +L+ +M++K         ++ +I NLC  G + E   I+  +++T  + +  T + L
Sbjct: 348 KAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSL 407

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +E Y   G    A+ +   M +  + P+  +   + +     G+ ++A T+    + +G 
Sbjct: 408 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG- 466

Query: 684 IQPKS 688
           ++P S
Sbjct: 467 VKPTS 471



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/376 (22%), Positives = 167/376 (44%), Gaps = 13/376 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  ++  L +      A      M   G+      +  L+      G+L  A  ++
Sbjct: 294 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 353

Query: 200 S-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           S MM K    P +   ++ I+ L    ++A+    ++ M   G  PNV+T+N L++GYC 
Sbjct: 354 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 413

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMVNDSNLF 314
           +  +++A  L+D M   G  P+   Y T++   CK  RI +     RD++ K V  +++ 
Sbjct: 414 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 473

Query: 315 HD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
           +           R   AK++ ++M + G    + TY  V+ G CR    D+A  +L++++
Sbjct: 474 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 533

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
               K + +++   ++ +   G+  EA+E+ +        PN  TYS+++  L +E    
Sbjct: 534 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 593

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA ++   + K G       +N +++ L  + ++  A  ++         +     + L 
Sbjct: 594 EADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLA 653

Query: 487 RGFCQKGDLEEALSLL 502
             F ++G   E + LL
Sbjct: 654 SLFSREGKYREHIKLL 669


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 220/439 (50%), Gaps = 30/439 (6%)

Query: 175 RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           +P A++Y  L+      G++R+A+ VL  M     AP+++  N  +     G    +A+ 
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
            ++ M+  G TPN +TYN L+ G C    + DA++L+  +P  GC P  V+Y TV+  LC
Sbjct: 64  LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
             +R                         +A ELV +M +  C P+  T+  V+   CR 
Sbjct: 124 SAERWG-----------------------DADELVTEMLRENCPPNEATFNVVIYSLCRK 160

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
           G L QA ++L++M  HGC  N V+Y A +NGLC       A  +++  +     P+ +TY
Sbjct: 161 GLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTY 220

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           + ++ GL    +  +A +++  M + G  P  V  N LI  LC++G M  A +  ++  +
Sbjct: 221 NTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPD 280

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           KGC  N + ++++I G  +   L++AL L ++M     +PD + Y  + + L+ +  +EE
Sbjct: 281 KGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEE 339

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVI 589
           A + + K+   G+ P  V Y  ++   C+ G+ E  + ++  M+S   C      Y  +I
Sbjct: 340 AIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSS-GCMPDDLTYVILI 398

Query: 590 ENLCSFGYLEEAGKILGKV 608
           E L   GYL EA ++L K+
Sbjct: 399 EGLAYEGYLNEARELLIKL 417



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 206/435 (47%), Gaps = 64/435 (14%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + PN  TYN LI   C+  +++DA+ ++D+M  +GC+PD V+Y  ++   CK +  ++  
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ-- 60

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                                A EL++ M   GC P+ VTY  +++G C  G++D A ++
Sbjct: 61  ---------------------AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL 99

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L+ +  HGCKP+TV+Y   L GLC   +  +A E++     E   PN  T++VV++ L R
Sbjct: 100 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 159

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           +G L +A  ++ +M K G     V  N +I  LC +  +DGA   + +  + GC  ++V 
Sbjct: 160 KGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVT 219

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           + +L++G C      +A  L+D+M      PD VT+ T+I  L + G + +A E+  +M 
Sbjct: 220 YNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMP 279

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK----------------------- 578
            KG  P  +TY T+I    +  +++  L+L  +M  K                       
Sbjct: 280 DKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEE 339

Query: 579 --QKCR-----------TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV- 624
             Q  R             YN ++  LC  G  E A  I+  ++ +    D  T  +L+ 
Sbjct: 340 AIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIE 399

Query: 625 ----ESYLNKGIPLL 635
               E YLN+   LL
Sbjct: 400 GLAYEGYLNEARELL 414



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 213/424 (50%), Gaps = 22/424 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y ++P+++      L +    + A  VL  M  RG  C P+  +Y  L+ A  +    R 
Sbjct: 8   YTYNPLIH-----TLCERGQVRDALSVLDDMLCRG--CAPDVVTYNILLEATCKGRGYRQ 60

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           AM ++ +M+     PN +  N  +  +     +  AL  L  +   G  P+ + YN ++K
Sbjct: 61  AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
           G C   R  DA +L+ EM  + C P++ ++  V+  LC++  +++   L+EKM       
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180

Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                    N   +Q  ++ A  L+++M   GC PD+VTY  ++ G C       A++++
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
             M  +GC P+ V++   +  LC  G  ++A E+     ++  TPN+ITYS ++ GL + 
Sbjct: 241 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 300

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            KL +A ++  EM  KGF P  +   LL + L  +  ++ A + +++  + G + + V +
Sbjct: 301 TKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 359

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            +++ G C+ G  E A+ ++  M      PD +TY  +I+ L+  G + EA EL++K+ S
Sbjct: 360 NAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCS 419

Query: 543 KGLV 546
           + ++
Sbjct: 420 RDVL 423



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 182/371 (49%), Gaps = 7/371 (1%)

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
           ++G++ +A  +++ M   GC PDVVTY  ++   C+     QA +++  M   GC PN V
Sbjct: 19  ERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNV 78

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y   ++G+C  G   +A E++         P+ + Y+ V+ GL    +  +A ++V EM
Sbjct: 79  TYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEM 138

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           +++   P     N++I SLCR+G +  A + +++    GC  N+V + ++I G C++ ++
Sbjct: 139 LRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNV 198

Query: 496 EEALSLLDDM--YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           + A+ LL  M  Y CK  PD VTY T++  L    R  +A ELM  M   G +P  VT+ 
Sbjct: 199 DGAMGLLSKMKSYGCK--PDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFN 256

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           T+I   CQ G + D +++ ++M  K        Y+ +I  L     L++A ++  ++   
Sbjct: 257 TLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHK 316

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
               D     +L E   +      A +   ++ +  + P   L   +   L   GK+E A
Sbjct: 317 GFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFA 375

Query: 672 DTLMLRFVERG 682
             +M   V  G
Sbjct: 376 IDIMAYMVSSG 386



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 153/307 (49%), Gaps = 26/307 (8%)

Query: 174 CRPEAFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P   ++ +V YS  R G L+ A+ +L  M K     N++  N  I+ L     +  A+
Sbjct: 143 CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAM 202

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
             L +M+  G  P+++TYN L+KG C   R  DA +L+D M   GC PD V++ T++G+L
Sbjct: 203 GLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFL 262

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           C+                       +G + +A E+  QM   GC P+ +TY+ +++G  +
Sbjct: 263 CQ-----------------------KGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAK 299

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
             +LDQA ++  +M H G  P+ + Y      L  +    EA + +   ++   +P+ + 
Sbjct: 300 ATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVL 358

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+ ++ GL R GK   A D++  MV  G  P  +   +LI+ L  EG ++ A++ + +  
Sbjct: 359 YNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLC 418

Query: 472 NKGCAVN 478
           ++   VN
Sbjct: 419 SRDVLVN 425



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 174/356 (48%), Gaps = 8/356 (2%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P+  TY  +++  C  G++  A  +L  M   GC P+ V+Y   L   C      +A E+
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           I+    E  TPN +TY+V+M G+  EG + +A +++R +   G  P+ V  N +++ LC 
Sbjct: 65  IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
             +   A + + E L + C  N   F  +I   C+KG L++A+ LL+ M       + VT
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 184

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y  II+ L +   V+ A  L+ KM S G  P +VTY T++   C   R  D  +L++ M 
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNM- 243

Query: 577 SKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           ++  C      +N +I  LC  G + +A ++  ++       ++ T   ++ S L K   
Sbjct: 244 TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII-SGLAKATK 302

Query: 634 L-LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           L  A ++   M ++   PD K+ + ++E L  +   EEA   + +  + G I P +
Sbjct: 303 LDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSG-ISPHT 356


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 225/471 (47%), Gaps = 31/471 (6%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N  I  L     LA ALR+L  M  +G  P+  T+N LI GYC  +++  A  L D+MPL
Sbjct: 15  NAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPL 74

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
           +G + D VSY  ++   C                       + GRI+EA EL  +M Q  
Sbjct: 75  RGFAQDVVSYAALIEGFC-----------------------ETGRIDEAVELFGEMDQ-- 109

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             PD+  Y A+V G C+ G  ++   ML++M   G +P+T +Y A ++  C   K+ EA 
Sbjct: 110 --PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAE 167

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           EM+    E+   P  +T + V++   +EG++S+A  V+  M  +G  P     N L+Q  
Sbjct: 168 EMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGF 227

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C EGK+  A   + +    G   + V +  LIRG C  G +E A  LL  M       D 
Sbjct: 228 CNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQ 287

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            TY  +I+AL K+GR ++A  L   + ++G+ P  VT+ ++I+  C+ G+V+   K LEK
Sbjct: 288 YTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEK 347

Query: 575 MLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           M+S   C      Y+  IE+LC     +E    +G++L+   K       +++   L + 
Sbjct: 348 MVSA-GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKER 406

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              L  +    M +    PD+           +EG+  EA+ +++   + G
Sbjct: 407 NYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 457



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 228/482 (47%), Gaps = 24/482 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A R L LM R G   RP+A+++  L+V Y R  ++  A  +   M     A +++     
Sbjct: 30  ALRYLSLMVRSGW--RPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAAL 87

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I       ++ +A+     M      P++  Y  L+KG C   R ++ + ++  M   G 
Sbjct: 88  IEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGW 143

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
            P   +Y  V+ + C E++ KE  +++++M                N +  +GR+ +A  
Sbjct: 144 RPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALR 203

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++  M   GC P+V TY A+V GFC  G++ +A  +L +M   G  P+ V+Y   + G C
Sbjct: 204 VLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQC 263

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            +G    A  ++   E +    +  TY+ +++ L ++G+  +AC +   +  +G  P  V
Sbjct: 264 IDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAV 323

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N LI  LC+ GK+D A KF+++ ++ GC  +   ++S I   C+    +E LS + +M
Sbjct: 324 TFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEM 383

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P TV YT +I  L K            +M+S G  P VVTY T +  YC  GR+
Sbjct: 384 LQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRL 443

Query: 566 EDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
            +   +L +M SK        AYN +++   S G  + A  IL ++   AS  +  T  +
Sbjct: 444 NEAENVLMEM-SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 502

Query: 623 LV 624
           L+
Sbjct: 503 LL 504



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 142/543 (26%), Positives = 244/543 (44%), Gaps = 44/543 (8%)

Query: 155 KLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG--KLRNAMYVLSMMQKAAVAPNLL 212
           K  +G + +L L   + +  RP   +Y  V   R    K + A  +L  M +  +AP ++
Sbjct: 124 KAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVV 183

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
            C   I+      +++ ALR LE M+L G  PNV TYN L++G+C+  ++  A+ L+++M
Sbjct: 184 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKM 243

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQ 332
            + G +PD V+Y  ++   C +                       G IE A  L+  M  
Sbjct: 244 RVCGVNPDAVTYNLLIRGQCID-----------------------GHIESAFRLLRLMEG 280

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G I D  TY A++N  C+ G  DQA  +   +   G KPN V++ + +NGLC +GK   
Sbjct: 281 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDI 340

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A + +        TP+  TYS  +  L +     E    + EM++K   P+ V   ++I 
Sbjct: 341 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 400

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            L +E       +   E ++ GC  +VV +T+ +R +C +G L EA ++L +M       
Sbjct: 401 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 460

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           DT+ Y T++D  +  G+ + A  ++ +M S   VP   TY  ++    ++  VED+L L 
Sbjct: 461 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 520

Query: 573 EKMLSKQKCRT-------------------AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
              + K    T                    Y+ ++E     G  EEA  ++  +   + 
Sbjct: 521 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSI 580

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             +      LV  +      L A+ + C M     IP L   + +   LI EG++++A  
Sbjct: 581 SLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKE 640

Query: 674 LML 676
           + +
Sbjct: 641 IFM 643



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/442 (22%), Positives = 191/442 (43%), Gaps = 29/442 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y +++         + A R+LRLM   G+      ++ L+ A  + G+   A  + 
Sbjct: 251 DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLF 310

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             ++   + PN +  N+ I+ L    K+  A +FLE+M  AG TP+  TY+  I+  C +
Sbjct: 311 DSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 370

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
              ++ +  I EM  K   P  V+Y  V+  L KE+    V     +MV+          
Sbjct: 371 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 430

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                 +  +GR+ EA+ ++ +MS+ G   D + Y  +++G   +G+ D A  +L+QM  
Sbjct: 431 TTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS 490

Query: 368 HGCKPNTVSYTAFLNGLCHN--------------GKSLEARE---MINTSEEEWWTPNAI 410
               PN  +Y   L  L                  K++E  +   + +  ++  + PN+ 
Sbjct: 491 VASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSG 550

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TYS ++ G   +G+  EA  +V  M +            L+   C+  +   A   +   
Sbjct: 551 TYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSM 610

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           +  G   +++++  L+ G   +G  ++A  +  +       PD + +  IID L K G  
Sbjct: 611 IQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHS 670

Query: 531 EEATELMMKMLSKGLVPTVVTY 552
           + + E+++ +      P+  TY
Sbjct: 671 DISREMIIMLERMNCRPSHQTY 692


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/545 (26%), Positives = 251/545 (46%), Gaps = 40/545 (7%)

Query: 91  WSPKLEGELRNLLRSLKPRQIC-AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLE 149
           WS     EL+   R+ KP      +  +  D  + L+FF W+ +++R  +       +L 
Sbjct: 32  WS-----ELKPHFRTTKPAIFLDQLFNAGVDSELVLRFFQWSQKEFRISYGLETTGKVLH 86

Query: 150 ILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR--AGKLRNAMYVLSMM----- 202
           +L+ +K     +  L  + +         F  L++   R  A  L   M VL+ +     
Sbjct: 87  LLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEI 146

Query: 203 ----------QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
                     Q      +L  CN  +  LV GN+  +     + M    I PN+ T+N  
Sbjct: 147 HSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIF 206

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE---KRIKEVRDLMEKMVN 309
           I G C   ++  A  +I+++   G SP+ V+Y T++   CK+    ++     ++++M+ 
Sbjct: 207 INGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLA 266

Query: 310 DS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
           +             + F     +  AK    +M + G  P++VTY +++NG    G+LD+
Sbjct: 267 NKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDE 326

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  +  +M   G KPN V++ A +NG C      EAR++ +   E+   PNAIT++ ++ 
Sbjct: 327 AIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMID 386

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
              + G + E   +   M+ +G FP     N LI  LCR   +  AKK + E  N     
Sbjct: 387 AFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKA 446

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +VV +  LI G+C+ G+  +A  LL +M      P+ VTY T++D     G ++ A ++ 
Sbjct: 447 DVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVR 506

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSF 595
            +M  +G    VVTY  +I  +C+ G++ED  +LL +ML K     RT Y+ V   +   
Sbjct: 507 TQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEK 566

Query: 596 GYLEE 600
           G++ +
Sbjct: 567 GFIPD 571



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 194/419 (46%), Gaps = 34/419 (8%)

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND-----SNLFHD---QGRIEEAKELVNQMSQMGCIPD 338
           V+  L   K+  +VR  ++K+V +     S++FH     G    A  L+  M  +  + +
Sbjct: 84  VLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTN 143

Query: 339 VVTYTA---------------------VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           +  ++A                     +++   +  E  + + + ++M     +PN  ++
Sbjct: 144 LEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTF 203

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG---KLSEACDVVRE 434
             F+NGLC  GK  +A ++I   +   ++PN +TY+ ++ G  ++G   K+  A  +++E
Sbjct: 204 NIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKE 263

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M+     P  +  N LI   C++  +  AK   +E   +G   N+V + SLI G    G 
Sbjct: 264 MLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGK 323

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           L+EA++L D M      P+ VT+  +I+   K   ++EA +L   +  + LVP  +T+ T
Sbjct: 324 LDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNT 383

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I  +C+ G +E+   L   ML +      + YN +I  LC    +  A K+L ++    
Sbjct: 384 MIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE 443

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
            KAD  T ++L+  +   G P  A K+   M N  + P+      + +   +EG  + A
Sbjct: 444 LKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAA 502


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 233/484 (48%), Gaps = 27/484 (5%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y  ++ +L ++  C  A  V R M   G++   + +S LMVA  +       M +L  M+
Sbjct: 195 YNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEME 254

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
              + PN+      I VL    K+ +A     RM   G  P+++TY  LI   C+  +++
Sbjct: 255 DLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLE 314

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
           +A +L  +M   G  PD+V Y T                L++K       F+D G ++  
Sbjct: 315 NAKELFVKMKANGHKPDQVIYIT----------------LLDK-------FNDFGDLDTF 351

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
           KE  +QM   G +PDVVT+T +V+  C+  + D+A      M   G  PN  +Y   + G
Sbjct: 352 KEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICG 411

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           L   G+  +A +++ T E     P A TY++ +    + G+  +A +   +M  KG  P 
Sbjct: 412 LLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPN 471

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V  N  + SL   G++  AK         G A + V +  +++ + + G ++EA++LL 
Sbjct: 472 IVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLS 531

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M     +PD +   ++ID+L K GRV+EA ++  +M    L PTVVTY T++    + G
Sbjct: 532 EMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEG 591

Query: 564 RVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           RV+  ++L E M+ K KC     ++N +++  C    +E A K+  K+     K D  T 
Sbjct: 592 RVQKAIELFESMIEK-KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTY 650

Query: 621 HVLV 624
           + ++
Sbjct: 651 NTVI 654



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 148/655 (22%), Positives = 276/655 (42%), Gaps = 91/655 (13%)

Query: 107 KPRQICAV-LRSQADERVALQFF--YWADRQWR-YRHDPIVYYMMLEILSKTKLCQGAKR 162
           KP Q+  + L  + ++   L  F  +W+  +   Y  D + + +++++L K +    A  
Sbjct: 329 KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFA 388

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
              +M ++GI      ++ L+    RAG++ +A+ +L  M+   V P     N  I    
Sbjct: 389 TFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFG 448

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              +  KA+   E+M+  GI PN++  N  +    ++ R+++A  + + +   G +PD V
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV 508

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQM 330
           +Y  +M    K  ++ E  +L+ +M+ +             +  +  GR++EA ++ ++M
Sbjct: 509 TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
             M   P VVTY  +++G  + G + +A ++ + M    C PNT+S+   L+  C N + 
Sbjct: 569 KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEV 628

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             A +M +        P+ +TY+ V++GL +E K++ A     ++ KK   P  V I  L
Sbjct: 629 ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTL 687

Query: 451 IQSLCR------------------------------------EGKMDGAKKFMQECLNKG 474
           +  L +                                    E +MD A  F +E +  G
Sbjct: 688 LPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNG 747

Query: 475 CAVNVVNFTSLIRGFCQK------------------------------GDL------EEA 498
                     L+R  C+                               G+L      E+A
Sbjct: 748 ICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKA 807

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             L  DM      PD  T+  ++    K+G++ E  EL  +M+S+   P  +TY  VI  
Sbjct: 808 WDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISS 867

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
             +   ++  L     ++S     T   Y  +I+ L   G LEEA ++  ++     K +
Sbjct: 868 LAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPN 927

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
            +  ++L+  Y   G    A ++  RM N  + PDLK    + + L L G+ +EA
Sbjct: 928 CAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEA 982



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/411 (24%), Positives = 194/411 (47%), Gaps = 17/411 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++++ L      + AK +   M   G +     +  L+  ++  G L       
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S M+     P+++     + VL       +A    + M+  GI PN+ TYN LI G    
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----------VN 309
            RI+DA+KL+  M   G  P   +Y   + Y  K     +  +  EKM            
Sbjct: 416 GRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVAC 475

Query: 310 DSNLFH--DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +++L+   + GR+ EAK + N + + G  PD VTY  ++  + +VG++D+A  +L +M  
Sbjct: 476 NASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR 535

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +GC+P+ +   + ++ L   G+  EA +M +  ++   +P  +TY+ ++ GL +EG++ +
Sbjct: 536 NGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQK 595

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A ++   M++K   P  +  N L+   C+  +++ A K   +     C  +V+ + ++I 
Sbjct: 596 AIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIY 655

Query: 488 GFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATEL 536
           G  ++  +  A      +   KK   PD VT  T++  L K G++ +A  +
Sbjct: 656 GLIKENKVNHAFWFFHQL---KKSMHPDHVTICTLLPGLVKCGQIGDAISI 703



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/498 (24%), Positives = 214/498 (42%), Gaps = 35/498 (7%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           K+ +   V   MQK  +  +L    T    L +   L +    L +M+ AG   N  +YN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 251 CLI-----KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
            LI      G+C      +A+++   M  +G  P   +Y  +M  L K+      RD   
Sbjct: 197 GLIHLLIQSGFCG-----EALEVYRRMVSEGLKPSLKTYSALMVALGKK------RDSEM 245

Query: 306 KMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            MV                 L+ +M  +G  P+V T+T  +    R G++D+A ++ ++M
Sbjct: 246 VMV-----------------LLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRM 288

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              GC P+ V+YT  ++ LC+ G+   A+E+    +     P+ + Y  ++      G L
Sbjct: 289 DDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDL 348

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
               +   +M   G+ P  V   +L+  LC+    D A         +G   N+  + +L
Sbjct: 349 DTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G  + G +E+AL LL  M      P   TY   ID   K+G   +A E   KM +KG+
Sbjct: 409 ICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGI 468

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGK 603
           VP +V     ++   ++GR+ +   +   +           YN +++     G ++EA  
Sbjct: 469 VPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVN 528

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           +L +++R   + D    + L++S    G    A+++  RM +  L P +     +   L 
Sbjct: 529 LLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLG 588

Query: 664 LEGKSEEADTLMLRFVER 681
            EG+ ++A  L    +E+
Sbjct: 589 KEGRVQKAIELFESMIEK 606



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 138/549 (25%), Positives = 239/549 (43%), Gaps = 26/549 (4%)

Query: 124  ALQFFYWADRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
            A Q F   DR    +  P V  Y  +L  L K    Q A  +   M  +  +C P   S+
Sbjct: 561  AWQMF---DRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEK--KCSPNTISF 615

Query: 182  --LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
              L+  + +  ++  A+ + S M      P++L  NT I+ L+  NK+  A  F  +++ 
Sbjct: 616  NTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK- 674

Query: 240  AGITPNVLTYNCLIKGYCDLHRIKDAIKLI-DEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
              + P+ +T   L+ G     +I DAI +  D M       ++  +  +MG    E  + 
Sbjct: 675  KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMD 734

Query: 299  EVRDLMEKMV------NDSNLFH------DQGRIEEAKELVNQMSQ-MGCIPDVVTYTAV 345
            +     E++V       DS L           R   A ++ ++ ++ +G  P + +Y  +
Sbjct: 735  KAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCL 794

Query: 346  VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
            +     V   ++A  + + M + GC P+  ++   L     +GK  E  E+         
Sbjct: 795  IGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRC 854

Query: 406  TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
             P+AITY++V+  L +   L +A D   ++V   F PTP     LI  L + G+++ A +
Sbjct: 855  KPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMR 914

Query: 466  FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
              +E  + GC  N   F  LI G+ + GD E A  L   M      PD  +YT ++D L 
Sbjct: 915  LFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLC 974

Query: 526  KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-- 583
              GRV+EA     ++ S GL P  + Y  +I+   +  R+E+ L L  +M ++       
Sbjct: 975  LAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLY 1034

Query: 584  AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
             YN ++ NL   G +E+A ++  ++     + D  T + L+  Y     P  AY V   M
Sbjct: 1035 TYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094

Query: 644  FNRNLIPDL 652
                  P++
Sbjct: 1095 MVDGCNPNI 1103



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/563 (21%), Positives = 243/563 (43%), Gaps = 52/563 (9%)

Query: 160  AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
            AK +   +   G+      ++ +M  YS+ G++  A+ +LS M +    P++++ N+ I 
Sbjct: 491  AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550

Query: 220  VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
             L    ++ +A +  +RM+   ++P V+TYN L+ G     R++ AI+L + M  K CSP
Sbjct: 551  SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSP 610

Query: 280  DKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----NDSNLFHD-------QGRIEEAKELV 327
            + +S+ T++   CK   ++    +  KM       D   ++        + ++  A    
Sbjct: 611  NTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFF 670

Query: 328  NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ-MYHHGCKPNTVSYTAFLNG--- 383
            +Q+ +    PD VT   ++ G  + G++  A  + +  MY    + N   +   + G   
Sbjct: 671  HQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLV 729

Query: 384  --------------------------------LCHNGKSLEAREMINT-SEEEWWTPNAI 410
                                            LC + + L A ++ +  +++   +P   
Sbjct: 730  EAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLA 789

Query: 411  TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            +Y+ ++  L       +A D+ ++M   G  P     N+L+    + GK+    +  +E 
Sbjct: 790  SYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEM 849

Query: 471  LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
            +++ C  + + +  +I    +  +L++AL    D+      P   TY  +ID L+K GR+
Sbjct: 850  ISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRL 909

Query: 531  EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQV 588
            EEA  L  +M   G  P    +  +I+ Y ++G  E   +L ++M+++  +    +Y  +
Sbjct: 910  EEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTIL 969

Query: 589  IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
            ++ LC  G ++EA     ++  T    D    + ++           A  +   M NR +
Sbjct: 970  VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029

Query: 649  IPDLKLCKKVSERLILEGKSEEA 671
            +PDL     +   L L G  E+A
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQA 1052



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 157/330 (47%), Gaps = 12/330 (3%)

Query: 203  QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            +K  ++P L   N  I  L+  +   KA    + M+  G  P+  T+N L+  +    +I
Sbjct: 780  KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKI 839

Query: 263  KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----------- 311
             +  +L  EM  + C PD ++Y  V+  L K   + +  D    +V+             
Sbjct: 840  TELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPL 899

Query: 312  -NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
             +     GR+EEA  L  +MS  GC P+   +  ++NG+ ++G+ + A ++ ++M + G 
Sbjct: 900  IDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959

Query: 371  KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            +P+  SYT  ++ LC  G+  EA    N  +     P+ I Y+ +++GL +  ++ EA  
Sbjct: 960  RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019

Query: 431  VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
            +  EM  +G  P     N L+ +L   G ++ AK+  +E    G   +V  + +LIRG+ 
Sbjct: 1020 LYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYS 1079

Query: 491  QKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
               + E A ++  +M +   +P+  TY  +
Sbjct: 1080 LSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 152/324 (46%), Gaps = 12/324 (3%)

Query: 241  GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
            GI+P + +YNCLI    ++H  + A  L  +M   GC+PD  ++  ++    K  +I E+
Sbjct: 783  GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITEL 842

Query: 301  RDLMEKMVN-----DSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             +L ++M++     D+  ++           +++A +    +      P   TY  +++G
Sbjct: 843  FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDG 902

Query: 349  FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
              +VG L++A ++ ++M  +GCKPN   +   +NG    G +  A ++      E   P+
Sbjct: 903  LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962

Query: 409  AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
              +Y++++  L   G++ EA     E+   G  P  +  N +I  L +  +M+ A     
Sbjct: 963  LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYN 1022

Query: 469  ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
            E  N+G   ++  + SL+      G +E+A  + +++ L   +PD  TY  +I   S + 
Sbjct: 1023 EMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082

Query: 529  RVEEATELMMKMLSKGLVPTVVTY 552
              E A  +   M+  G  P + TY
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 161/376 (42%), Gaps = 5/376 (1%)

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
           HD  ++E+   +   M +     D+ TY  +       G L Q   +L +M   G   N 
Sbjct: 135 HD--KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNA 192

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            SY   ++ L  +G   EA E+      E   P+  TYS +M  L ++        +++E
Sbjct: 193 YSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKE 252

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M   G  P      + I+ L R GK+D A +  +   ++GC  ++V +T LI   C  G 
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           LE A  L   M      PD V Y T++D  +  G ++   E   +M + G +P VVT+  
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           ++   C+    ++     + M  +        YN +I  L   G +E+A K+LG +    
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVG 432

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
            +  A T ++ ++ +   G    A +   +M  + ++P++  C      L   G+  EA 
Sbjct: 433 VQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492

Query: 673 TLMLRFVERGHIQPKS 688
           T+     E G + P S
Sbjct: 493 TMFNGLRENG-LAPDS 507



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 112/261 (42%), Gaps = 28/261 (10%)

Query: 124  ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSY 181
            AL FFY       +R  P  Y  +++ L+K    + A R+   M+  G  C+P    F+ 
Sbjct: 877  ALDFFYDLVSS-DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYG--CKPNCAIFNI 933

Query: 182  LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
            L+  Y + G    A  +   M    + P+L      +  L +  ++ +AL +   ++  G
Sbjct: 934  LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993

Query: 242  ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
            + P+ + YN +I G     R+++A+ L +EM  +G  PD  +Y ++M  L          
Sbjct: 994  LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGL-------- 1045

Query: 302  DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                            G +E+AK +  ++   G  PDV TY A++ G+      + A  +
Sbjct: 1046 ---------------AGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTV 1090

Query: 362  LQQMYHHGCKPNTVSYTAFLN 382
             + M   GC PN  +Y    N
Sbjct: 1091 YKNMMVDGCNPNIGTYAQLPN 1111


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 243/488 (49%), Gaps = 16/488 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ A ++  K    + +   MQ+  ++ NL   N  I+     ++++ AL  L +M 
Sbjct: 13  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+++T + L+ GYC   RI DA+ L+D+M   G  PD +++ T++  L    +  
Sbjct: 73  KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132

Query: 299 EVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           E   L+++MV               N    +G I+ A  L+N+M       DVV +  ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C+   +D A  + ++M   G +PN V+Y++ ++ LC  G+  +A ++++   E+   
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN +T++ ++    +EGK  EA  +  +M+K+   P     N LI   C   ++D AK+ 
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +  ++K C  ++  + +LI+GFC+   +E+   L  +M       DTVTYTT+I  L  
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--- 583
           +G  + A ++  +M+S G+ P ++TY  ++   C  G++E  L++ + M  K + +    
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIY 431

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            Y  +IE +C  G +++   +   +     K +  T + ++    +K +   AY +  +M
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491

Query: 644 FNRNLIPD 651
                +PD
Sbjct: 492 KEDGPLPD 499



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 222/449 (49%), Gaps = 12/449 (2%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           H+   Y +++    +      A  +L  M + G E      S L+  Y    ++ +A+ +
Sbjct: 43  HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 102

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +  M +    P+ +   T IH L + NK ++A+  ++RM   G  PN++TY  ++ G C 
Sbjct: 103 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 162

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VN 309
              I  A  L+++M       D V + T++  LCK + + +  +L ++M         V 
Sbjct: 163 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 222

Query: 310 DSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            S+L       GR  +A +L++ M +    P++VT+ A+++ F + G+  +A+K+   M 
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                P+  +Y + +NG C + +  +A++M      +   P+  TY+ ++ G  +  ++ 
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +  ++ REM  +G     V    LIQ L  +G  D A+K  ++ ++ G   +++ ++ L+
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C  G LE+AL + D M   +   D   YTT+I+ + K G+V++  +L   +  KG+ 
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           P VVTY T+I   C    +++   LL+KM
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKM 491



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 206/422 (48%), Gaps = 20/422 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           YR D I +  ++  L        A  ++  M +RG  C+P   +Y +V     + G +  
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDIDL 168

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +L+ M+ A +  +++I NT I  L     +  AL   + M+  GI PNV+TY+ LI 
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DS 311
             C   R  DA +L+ +M  K  +P+ V++  ++    KE +  E   L + M+    D 
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288

Query: 312 NLF-----------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
           ++F           HD  R+++AK++   M    C PD+ TY  ++ GFC+   ++   +
Sbjct: 289 DIFTYNSLINGFCMHD--RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           + ++M H G   +TV+YT  + GL H+G    A+++      +   P+ +TYS+++ GL 
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
             GKL +A +V   M K            +I+ +C+ GK+D           KG   NVV
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + ++I G C K  L+EA +LL  M      PD+ TY T+I A  ++G    + EL+ +M
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526

Query: 541 LS 542
            S
Sbjct: 527 RS 528



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 206/431 (47%), Gaps = 27/431 (6%)

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P++  +N L+     + +    I L ++M   G S +  +Y  ++   C+          
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCR---------- 57

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                        + +I  A  L+ +M ++G  P +VT ++++NG+C    +  A  ++ 
Sbjct: 58  -------------RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 104

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           QM   G +P+T+++T  ++GL  + K+ EA  +++   +    PN +TY VV++GL + G
Sbjct: 105 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
            +  A +++ +M         V  N +I SLC+   +D A    +E   KG   NVV ++
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           SLI   C  G   +A  LL DM   K +P+ VT+  +IDA  K G+  EA +L   M+ +
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEE 600
            + P + TY ++I+ +C   R++   ++ E M+SK  C      YN +I+  C    +E+
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD-CFPDLDTYNTLIKGFCKSKRVED 343

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
             ++  ++       D  T   L++   + G    A KV  +M +  + PD+     + +
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403

Query: 661 RLILEGKSEEA 671
            L   GK E+A
Sbjct: 404 GLCNNGKLEKA 414



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 164/354 (46%), Gaps = 12/354 (3%)

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           +P +  +  +++   ++ + D    + ++M   G   N  +Y   +N  C   +   A  
Sbjct: 7   LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           ++    +  + P+ +T S +++G     ++S+A  +V +MV+ G+ P  +    LI  L 
Sbjct: 67  LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
              K   A   +   + +GC  N+V +  ++ G C++GD++ A +LL+ M   K + D V
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            + TIID+L K   V++A  L  +M +KG+ P VVTY ++I   C  GR  D  +LL  M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 576 LSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY-----L 628
           + K+       +N +I+     G   EA K+   +++ +   D  T + L+  +     L
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +K   +  +     M +++  PDL     + +      + E+   L      RG
Sbjct: 307 DKAKQMFEF-----MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 2/194 (1%)

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MVK    P+  E N L+ ++ +  K D      ++    G + N+  +  LI  FC++  
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           +  AL+LL  M     +P  VT +++++      R+ +A  L+ +M+  G  P  +T+ T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +IH      +  + + L+++M+ +  Q     Y  V+  LC  G ++ A  +L K+    
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 613 SKADASTCHVLVES 626
            +AD    + +++S
Sbjct: 181 IEADVVIFNTIIDS 194


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 228/486 (46%), Gaps = 19/486 (3%)

Query: 163 VLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
           +LR M R G    P AFSY  ++    RAG+  +A+ V   M + AV PN +  NT I  
Sbjct: 1   MLRRMGRDGAP-PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDG 59

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
            + G  L    R  ++M   G+ PN +TYN L+ G C   R+ +   L+DEM  +   PD
Sbjct: 60  HIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPD 119

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKELVN 328
             +Y  +   L +    K +  L  K + +     D             G++  A+E++ 
Sbjct: 120 GFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ 179

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            +   G +P  V Y  ++NG+C+ GEL+ A     QM     KP+ ++Y A +NGLC   
Sbjct: 180 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 239

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +   A++++   ++    P   T++ ++    R G+L +   V+ EM + G  P  V   
Sbjct: 240 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 299

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            ++ + C+ GK+  A   + +  +K    N   + ++I  + + G  ++A  L++ M   
Sbjct: 300 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 359

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P  VTY  +I  L    ++ EA E++  + +  L+P  V+Y T+I   C  G ++  
Sbjct: 360 GISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA 419

Query: 569 LKLLEKMLS---KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           L L ++M     K   RT Y+Q+I  L   G L E   +  K+++       +  +++VE
Sbjct: 420 LDLQQRMHKYGIKSTVRT-YHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVE 478

Query: 626 SYLNKG 631
           +Y   G
Sbjct: 479 AYSKYG 484



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 179/351 (50%), Gaps = 7/351 (1%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR  +A E+ ++M++   +P+ +TY  +++G  + G+L+   ++  QM  HG KPN ++Y
Sbjct: 29  GRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITY 88

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              L+GLC  G+  E   +++    +   P+  TYS++  GL R G       +  + +K
Sbjct: 89  NVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK 148

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G        ++L+  LC++GK+  A++ +Q  +N G     V + +LI G+CQ G+LE 
Sbjct: 149 NGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEG 208

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A S    M      PD +TY  +I+ L K  R+  A +L+M+M   G+ PTV T+ T+I 
Sbjct: 209 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 268

Query: 558 RYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
            Y + G++E    +L +M     +    +Y  ++   C  G + EA  IL  +       
Sbjct: 269 AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 328

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
           +A   + ++++Y+  G    A+ +  +M +  + P +     V+  L+++G
Sbjct: 329 NAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI-----VTYNLLIKG 374



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/425 (21%), Positives = 184/425 (43%), Gaps = 51/425 (12%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           + + I Y ++L  L +         +L  MA +  +  P+ F+Y  L    SR G  +  
Sbjct: 82  KPNAITYNVLLSGLCRAGRMGETSALLDEMASQ--KMVPDGFTYSILFDGLSRNGDSKAM 139

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + +     K  V      C+  ++ L    K++ A   L+ +  AG+ P  + YN LI G
Sbjct: 140 LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 199

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---- 311
           YC    ++ A     +M  +   PD ++Y  ++  LCK +RI   +DL+ +M ++     
Sbjct: 200 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 259

Query: 312 --------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   + +   G++E+   ++++M + G  P+VV+Y ++VN FC+ G++ +A  +L 
Sbjct: 260 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 319

Query: 364 QMYH-----------------------------------HGCKPNTVSYTAFLNGLCHNG 388
            M+H                                   +G  P+ V+Y   + GLC+  
Sbjct: 320 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 379

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EA E+IN+       P+A++Y+ ++      G + +A D+ + M K G   T    +
Sbjct: 380 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 439

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            LI  L   G+++  +   Q+ +      +      ++  + + G+  +A  L  +M   
Sbjct: 440 QLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499

Query: 509 KKDPD 513
           + + D
Sbjct: 500 RNNHD 504



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 143/308 (46%), Gaps = 26/308 (8%)

Query: 134 QWRYRH---DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
           Q + RH   D I Y  ++  L K +    A+ +L  M   G+    E F+ L+ AY R G
Sbjct: 215 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 274

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L     VLS MQ+  + PN++   + ++      K+ +A+  L+ M    + PN   YN
Sbjct: 275 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 334

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            +I  Y +      A  L+++M   G SP  V+Y  ++  LC                  
Sbjct: 335 AIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC------------------ 376

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                +Q +I EA+E++N +S    IPD V+Y  +++  C  G +D+A  + Q+M+ +G 
Sbjct: 377 -----NQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 431

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           K    +Y   ++GL   G+  E   +     +    P+   +++++    + G   +A D
Sbjct: 432 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 491

Query: 431 VVREMVKK 438
           + +EM++K
Sbjct: 492 LRKEMLQK 499


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 229/496 (46%), Gaps = 77/496 (15%)

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M+   I P++++YN +I G C   R++ A+ L+ EM    C P+  +Y  +M  LCKE  
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKE-- 58

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                                GR+EEA  L+ +M + G   DVV Y+ +++GFC  G LD
Sbjct: 59  ---------------------GRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLD 97

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           + K +  +M   G  PN V Y+  +NG C  G   EA  +++T  E    P+  TY+ ++
Sbjct: 98  RGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMI 157

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            GL ++G+  +A D+   M +KG  P+ V  N+LI  LC+EG +  A K  +  L KG  
Sbjct: 158 GGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKR 217

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLL-----DDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
           + VV++ +LI G C  G L+EA+ L      D  Y+   +PD +T+ T+I  L K GR++
Sbjct: 218 LEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYV---EPDVITFNTVIQGLCKEGRLD 274

Query: 532 EATELMMKMLSK-----------------------------------GLVPTVVTYRTVI 556
           +A E+   M+ +                                   GLVP+  TY  +I
Sbjct: 275 KAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMI 334

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRTA------YNQVIENLCSFGYLEEAGKILGKVLR 610
             +C++     +L   + + S+ K          YN ++ +LC    LE+A ++  ++  
Sbjct: 335 DGFCKM----HMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKE 390

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
           +  + D  + +++++  L  G    A ++   M    L PD         RL   G+ EE
Sbjct: 391 SNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEE 450

Query: 671 ADTLMLRFVERGHIQP 686
           A       +  G I P
Sbjct: 451 AKGAFDSMIASG-ITP 465



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 235/506 (46%), Gaps = 67/506 (13%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  ++  L K K  +  K V  L+   G  C P +F+Y  LM    + G++  AM 
Sbjct: 9   DIVSYNTIINGLCKEKRLE--KAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M++  +  ++++ +T I        L +     + M   GI+PNV+ Y+CLI G+C
Sbjct: 67  LLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFC 126

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
                ++A  ++  M  +G  PD  +Y  ++G LCK+                       
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKD----------------------- 163

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR  +A +L + M++ G  P  VTY  ++NG C+ G +  A K+ + M   G +   VSY
Sbjct: 164 GRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSY 223

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEE--WWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
              + GLC+NGK  EA ++ ++  E+  +  P+ IT++ V+ GL +EG+L +A ++   M
Sbjct: 224 NTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTM 283

Query: 436 VKKGFF-----------------------------------PTPVEINLLIQSLCREGKM 460
           +++G F                                   P+    +++I   C+   +
Sbjct: 284 IERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHML 343

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           + AK         G +  + ++ +L+   C++  LE+A  L  +M     +PDT+++  +
Sbjct: 344 NFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIM 403

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           ID   K G +  A EL+  M   GL P   TY + I+R  ++G++E+     + M++   
Sbjct: 404 IDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASG- 462

Query: 581 CRTAYNQVIENLC-SFGYLEEAGKIL 605
             T  N V ++L   FG  +E  +++
Sbjct: 463 -ITPDNHVYDSLIKGFGLNDEIEEVI 487



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 213/450 (47%), Gaps = 14/450 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           +   Y ++++ L K    + A R+L  M R+G+E     +S L+  +   G L     + 
Sbjct: 44  NSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALF 103

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  ++PN+++ +  I+         +A   L  M   GI P+V TY C+I G C  
Sbjct: 104 DEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKD 163

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH---- 315
            R + A+ L D M  KG  P  V+Y  ++  LCKE  I +   + E M+           
Sbjct: 164 GRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSY 223

Query: 316 --------DQGRIEEAKELVNQMSQMGCI--PDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                   + G+++EA +L + + + G    PDV+T+  V+ G C+ G LD+A ++   M
Sbjct: 224 NTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTM 283

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G   N  +    +     +G   +A E+     +    P++ TYSV++ G  +   L
Sbjct: 284 IERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHML 343

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
           + A  +   M   G  PT  + N L+ SLC+E  ++ A++  QE     C  + ++F  +
Sbjct: 344 NFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIM 403

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G  + GD+  A  LL+DM      PD  TY++ I+ LSK G++EEA      M++ G+
Sbjct: 404 IDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGI 463

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            P    Y ++I  +     +E+++ LL +M
Sbjct: 464 TPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 196/400 (49%), Gaps = 27/400 (6%)

Query: 172 IECRP----EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           ++CRP      FS L+ A S+  K    +Y+   MQ   +  NL  CN  ++     ++L
Sbjct: 73  VQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQL 132

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           + AL FL +M   G  P+++T+  L+ G+C   R+ DA+ + D+M   G  P+ V Y T+
Sbjct: 133 SLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI 192

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +  LCK K++                       + A +L+N+M + G  PDVVTY ++++
Sbjct: 193 IDGLCKSKQV-----------------------DNALDLLNRMEKDGIGPDVVTYNSLIS 229

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G C  G    A +M+  M      P+  ++ A ++     G+  EA E           P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           + +TYS++++GL    +L EA ++   MV KG FP  V  ++LI   C+  K++   K  
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            E   +G   N V +T LI+G+C+ G L  A  +   M  C   P+ +TY  ++  L  N
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
           G++E+A  ++  M   G+   +VTY  +I   C+ G V D
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 187/373 (50%), Gaps = 2/373 (0%)

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           N F    ++  A   + +M ++G  P +VT+ +++NGFCR   +  A  M  QM   G K
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN V Y   ++GLC + +   A +++N  E++   P+ +TY+ ++ GL   G+ S+A  +
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           V  M K+  +P     N LI +  +EG++  A++F +E + +    ++V ++ LI G C 
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
              L+EA  +   M      PD VTY+ +I+   K+ +VE   +L  +M  +G+V   VT
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y  +I  YC+ G++    ++  +M+          YN ++  LC  G +E+A  IL  + 
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
           +    AD  T ++++      G    A+ + C +  + L+PD+     +   L  +G   
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483

Query: 670 EADTLMLRFVERG 682
           EAD L  +  E G
Sbjct: 484 EADALFRKMKEDG 496



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 163/322 (50%), Gaps = 23/322 (7%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y+ + ++Y  +++ L K+K    A  +L  M + GI      ++ L+     +G+  +A 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            ++S M K  + P++   N  I   V   ++++A  F E M    + P+++TY+ LI G 
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   R+ +A ++   M  KGC PD V+Y  ++   CK K++                   
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV------------------- 342

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
               E   +L  +MSQ G + + VTYT ++ G+CR G+L+ A+++ ++M   G  PN ++
Sbjct: 343 ----EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   L+GLC NGK  +A  ++   ++     + +TY++++ G+ + G++++A D+   + 
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458

Query: 437 KKGFFPTPVEINLLIQSLCREG 458
            +G  P       ++  L ++G
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKG 480



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 128/318 (40%), Gaps = 38/318 (11%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+   +S ++  + +  K      +  +M   G        N+L+   CR  ++  A  F
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           + + +  G   ++V F SL+ GFC+   + +AL + D M      P+ V Y TIID L K
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ------- 579
           + +V+ A +L+ +M   G+ P VVTY ++I   C  GR  D  +++  M  ++       
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 580 ------KCR------------------------TAYNQVIENLCSFGYLEEAGKILGKVL 609
                  C                           Y+ +I  LC +  L+EA ++ G ++
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
                 D  T  +L+  Y          K+ C M  R ++ +      + +     GK  
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378

Query: 670 EADTLMLRFVERGHIQPK 687
            A+ +  R V  G + P 
Sbjct: 379 VAEEIFRRMVFCG-VHPN 395



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 2/277 (0%)

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           N   Y  ++    R  KL ++ D+   MV+    P+  + + L+ ++ +  K D      
Sbjct: 45  NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
           ++    G   N+     L+  FC+   L  ALS L  M     +P  VT+ ++++   + 
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAY 585
            RV +A  +  +M+  G  P VV Y T+I   C+  +V++ L LL +M           Y
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           N +I  LCS G   +A +++  + +     D  T + L+++ + +G    A +    M  
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           R+L PD+     +   L +  + +EA+ +    V +G
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/249 (18%), Positives = 101/249 (40%), Gaps = 37/249 (14%)

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN-- 527
           C ++    N  ++  ++R   +   L+++L L   M  C+  P    ++ ++ A+SK   
Sbjct: 37  CFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKK 96

Query: 528 ---------------------------------GRVEEATELMMKMLSKGLVPTVVTYRT 554
                                             ++  A   + KM+  G  P++VT+ +
Sbjct: 97  YDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGS 156

Query: 555 VIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +++ +C+  RV D L + ++M  +  +     YN +I+ LC    ++ A  +L ++ +  
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
              D  T + L+    + G    A ++   M  R + PD+     + +  + EG+  EA+
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276

Query: 673 TLMLRFVER 681
                 + R
Sbjct: 277 EFYEEMIRR 285



 Score = 43.9 bits (102), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 35/177 (19%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y +++    K+K  +   ++   M++RG+      ++ L+  Y RAGKL  A  + 
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ--------------------- 238
             M    V PN++  N  +H L    K+ KAL  L  MQ                     
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444

Query: 239 --------------LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
                           G+ P++ TY  ++ G       ++A  L  +M   G  P++
Sbjct: 445 GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 216/461 (46%), Gaps = 27/461 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D   Y ++L+ L        A  +LR+MA  G  C P   +Y  V   + + G +  A  
Sbjct: 184 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACD 243

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  + P+L+  N+ +H L     + KA  FL +M    + PN  TYN LI GY 
Sbjct: 244 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 303

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              + K+A+++  EM      PD V+   +MG LCK  +IKE RD+ +            
Sbjct: 304 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD------------ 351

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
                       M+  G  PDV +Y  ++NG+   G L     +   M   G  P+  ++
Sbjct: 352 -----------TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 400

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              +    + G   +A  + N   +    P+ +TY  V+  L R GK+ +A +   +M+ 
Sbjct: 401 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 460

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P     N LIQ  C  G +  AK+ + E +N G  +++V F+S+I   C+ G + +
Sbjct: 461 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 520

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A ++ D        PD V Y  ++D     G++E+A  +   M+S G+ P VV Y T+++
Sbjct: 521 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 580

Query: 558 RYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
            YC++GR+++ L L  +ML +  +     Y+ +I+ L   G
Sbjct: 581 GYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAG 621



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 236/533 (44%), Gaps = 28/533 (5%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGI 172
           A LR   ++RV           W Y +       ++   S T   + A RV + M R  I
Sbjct: 278 AFLRQMVNKRVL-------PNNWTYNN-------LIYGYSSTGQWKEAVRVFKEMRRHSI 323

Query: 173 ECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
                  S LM +  + GK++ A  V   M      P++   N  ++       L     
Sbjct: 324 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 383

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
             + M   GI P+  T+N LIK Y +   +  A+ + +EM   G  PD V+Y TV+  LC
Sbjct: 384 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 443

Query: 293 KEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
           +  ++ +  +   +M++                F   G + +AKEL++++   G   D+V
Sbjct: 444 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 503

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
            +++++N  C++G +  A+ +     + G  P+ V Y   ++G C  GK  +A  + +  
Sbjct: 504 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM 563

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
                 PN + Y  +++G  + G++ E   + REM+++G  P+ +  +++I  L   G+ 
Sbjct: 564 VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRT 623

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             AK    E    G A+++  +  ++RG  +    +EA+ L  ++       + +T  T+
Sbjct: 624 VPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 683

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-- 578
           ID + +  RVEEA +L   +    LVP+VVTY  +I    + G VE+   +   M +   
Sbjct: 684 IDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 743

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +      N V+  L     +  AG  L K+       +  T  +LV+ + +KG
Sbjct: 744 EPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 796



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 207/485 (42%), Gaps = 62/485 (12%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           ++P   TY  L+      HR + A+    ++   G   + +    ++   C+ KR  E  
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
           D+                      L+++  ++GC+PDV +Y+ ++   C  G+  QA  +
Sbjct: 170 DI----------------------LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 207

Query: 362 LQQMYHHG--CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH-- 417
           L+ M   G  C PN V+Y   ++G    G   +A ++     +    P+ +TY+ V+H  
Sbjct: 208 LRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHAL 267

Query: 418 ---------------------------------GLRREGKLSEACDVVREMVKKGFFPTP 444
                                            G    G+  EA  V +EM +    P  
Sbjct: 268 CKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDV 327

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V +++L+ SLC+ GK+  A+        KG   +V ++  ++ G+  KG L +   L D 
Sbjct: 328 VTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDL 387

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      PD  T+  +I A +  G +++A  +  +M   G+ P VVTYRTVI   C++G+
Sbjct: 388 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 447

Query: 565 VEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           ++D ++   +M+ +     + AYN +I+  C+ G L +A +++ +++      D      
Sbjct: 448 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 507

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++ +    G  + A  +     N  L PD  +   + +   L GK E+A  +    V  G
Sbjct: 508 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 567

Query: 683 HIQPK 687
            I+P 
Sbjct: 568 -IEPN 571



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 154/347 (44%), Gaps = 23/347 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           AK ++  +   G+      FS ++    + G++ +A  +  +     + P+ ++ N  + 
Sbjct: 486 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 545

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
              +  K+ KALR  + M  AGI PNV+ Y  L+ GYC + RI + + L  EM  +G  P
Sbjct: 546 GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKP 605

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
             + Y  ++                        LF + GR   AK   ++M++ G   D+
Sbjct: 606 STILYSIII----------------------DGLF-EAGRTVPAKMKFHEMTESGIAMDI 642

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            TY  V+ G  +    D+A  + +++     K N ++    ++G+    +  EA+++  +
Sbjct: 643 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFAS 702

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
                  P+ +TYS+++  L +EG + EA D+   M   G  P    +N +++ L ++ +
Sbjct: 703 ISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 762

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +  A  ++ +   +  ++  +    L+  F  KG   E +  L   Y
Sbjct: 763 IVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPAKY 809


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 243/504 (48%), Gaps = 15/504 (2%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L++L    +    + V  +M +  I      F+ +M +  + G++  A+ VL +M+   
Sbjct: 178 VLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFG 237

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
             PN +  N  ++ L    +  +A   +E+M + G+  +  TYN LI+G+C     ++A 
Sbjct: 238 CDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEAN 297

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR---------DLMEKMVNDSNLFHDQ 317
            L  EM  +G  P  V+Y T+M  LC+  R+ + R         DLM  +V+ + L +  
Sbjct: 298 DLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGY 357

Query: 318 GRI---EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
            R+    EA  L +++     +P VVTY  +++G CR G LD AK M   M  HG  P+ 
Sbjct: 358 SRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDV 417

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V++T  + G C  G    A+E+ +        P+ I Y+  + G  + G  S+A  +  E
Sbjct: 418 VTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEE 477

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M  +GF P  +  N+LI  LC+ G  D A + +Q+   +G   + V +TS+I      G 
Sbjct: 478 MKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGL 537

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           L +A  +  DM      P  VTYT +I + +  GR++ A +   +M  KG+ P V+TY  
Sbjct: 538 LRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNA 597

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I+  C+   ++    L  +M SK     +  Y  +I    +  Y ++A K+   +L   
Sbjct: 598 LIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDRE 657

Query: 613 SKADASTCHVLVESYLNKGIPLLA 636
            K D+ T H  +  +L+K   LLA
Sbjct: 658 IKPDSCT-HSALMKHLSKDYKLLA 680



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 142/566 (25%), Positives = 250/566 (44%), Gaps = 43/566 (7%)

Query: 107 KPRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR 165
           +P  +  VL S +     AL+FF W ++Q  +      +  +L+IL+K    + A  V+ 
Sbjct: 50  QPEFLLRVLNSVKHRPLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVME 109

Query: 166 -----------------LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVA 208
                            +   R  E   +    L+  +++   L   + V   M    + 
Sbjct: 110 KAIEVKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLL 169

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           P++  CN  + +L   + + +       M    I P ++T+N ++   C    +  A+++
Sbjct: 170 PDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEV 229

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVN 328
           +D M + GC P+ VSY  ++                       N    +G  + AKEL+ 
Sbjct: 230 LDVMRMFGCDPNDVSYNVLV-----------------------NGLSGKGEFDRAKELIE 266

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           QMS +G      TY  ++ GFC+    ++A  + ++M   G  P  V+Y   +  LC  G
Sbjct: 267 QMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLG 326

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  +AR  ++    E   P+ ++Y+ +++G  R G  +EA  +  E+  K   P+ V  N
Sbjct: 327 RVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYN 386

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            LI   CR G +D AK    + +  G   +VV FT L+RGFCQ G+L  A  L D+M   
Sbjct: 387 TLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSR 446

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD + YTT I    K G   +A  +  +M ++G  P ++TY  +I+  C++G  +D 
Sbjct: 447 GLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDA 506

Query: 569 LKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            +L++KM  +        Y  +I      G L +A ++   +L+        T  VL+ S
Sbjct: 507 NELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHS 566

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDL 652
           Y  +G    A K    M ++ + P++
Sbjct: 567 YAVRGRLDFAKKYFDEMQDKGVSPNV 592



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  D I Y +++  L K      A  +++ M   GI      ++ ++ A+  +G LR A 
Sbjct: 483 FPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAE 542

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            V S M K  + P+++     IH   V  +L  A ++ + MQ  G++PNV+TYN LI G 
Sbjct: 543 EVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGL 602

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           C  + +  A  L  EM  KG SP+K +Y
Sbjct: 603 CKENMMDVAYNLFAEMESKGVSPNKYTY 630



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 30/233 (12%)

Query: 173 ECRPEAFSYLMVAYS-------RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
           E + E F   ++ Y+       + G   +A  ++  M+   + P+ +   + IH  ++  
Sbjct: 477 EMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISG 536

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
            L KA      M   GI P+V+TY  LI  Y    R+  A K  DEM  KG SP+ ++Y 
Sbjct: 537 LLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYN 596

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            ++  LCKE                         ++ A  L  +M   G  P+  TYT +
Sbjct: 597 ALIYGLCKE-----------------------NMMDVAYNLFAEMESKGVSPNKYTYTIL 633

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           +N    +     A K+ + M     KP++ +++A +  L  + K L    + N
Sbjct: 634 INENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRLEN 686



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 77/161 (47%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++     + L + A+ V   M ++GI      ++ L+ +Y+  G+L  A    
Sbjct: 521 DHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYF 580

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             MQ   V+PN++  N  I+ L   N +  A      M+  G++PN  TY  LI    +L
Sbjct: 581 DEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNL 640

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
              +DA+KL  +M  +   PD  ++  +M +L K+ ++  V
Sbjct: 641 QYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAV 681


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 217/461 (47%), Gaps = 27/461 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D   Y ++L+ L        A  +LR+MA  G  C P   +Y  V   + + G +  A  
Sbjct: 194 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACD 253

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  + P+L+  N+ +H L     + KA  FL +M    + PN  TYN LI GY 
Sbjct: 254 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 313

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              + K+A+++  EM      PD V+   +MG LCK  +IKE RD+ +            
Sbjct: 314 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD------------ 361

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
                       M+  G  PDV +Y  ++NG+   G L     +   M   G  P+  ++
Sbjct: 362 -----------TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 410

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              +    + G   +A  + N   +    P+ +TY  V+  L R GK+ +A +   +M+ 
Sbjct: 411 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 470

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P     N LIQ  C  G +  AK+ + E +N G  +++V F+S+I   C+ G + +
Sbjct: 471 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 530

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A ++ D        PD V Y+ ++D     G++E+A  +   M+S G+ P VV Y T+++
Sbjct: 531 AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVN 590

Query: 558 RYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
            YC++GR+++ L L  +ML +  +     Y+ +I+ L   G
Sbjct: 591 GYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 631



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/536 (25%), Positives = 239/536 (44%), Gaps = 34/536 (6%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGI 172
           A LR   ++RV           W Y +       ++   S T   + A RV + M R  I
Sbjct: 288 AFLRQMVNKRVL-------PNNWTYNN-------LIYGYSSTGQWKEAVRVFKEMRRHSI 333

Query: 173 ECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
                  S LM +  + GK++ A  V   M      P++   N  ++       L     
Sbjct: 334 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 393

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
             + M   GI P+  T+N LIK Y +   +  A+ + +EM   G  PD V+Y TV+  LC
Sbjct: 394 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 453

Query: 293 KEKRIKEVRDLMEK---MVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIP 337
              RI ++ D MEK   M++                F   G + +AKEL++++   G   
Sbjct: 454 ---RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHL 510

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D+V +++++N  C++G +  A+ +     + G  P+ V Y+  ++G C  GK  +A  + 
Sbjct: 511 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVF 570

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +        PN + Y  +++G  + G++ E   + REM+++G  P+ +  +++I  L + 
Sbjct: 571 DAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQA 630

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G+   AK    E    G A+++  +  ++RG  +    +EA+ L  ++       + +T 
Sbjct: 631 GRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 690

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
            T+ID + +  RVEEA +L   +    LVP VVTY  +I    + G VE+   +   M +
Sbjct: 691 NTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQN 750

Query: 578 K--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
              +      N V+  L     +  AG  L K+       +  T  +LV+ + +KG
Sbjct: 751 AGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 806



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 207/485 (42%), Gaps = 62/485 (12%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           ++P   TY  L+      HR + A+    ++   G   + +    ++   C+ KR  E  
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
           D+                      L+++  ++GC+PDV +Y+ ++   C  G+  QA  +
Sbjct: 180 DI----------------------LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 217

Query: 362 LQQMYHHG--CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH-- 417
           L+ M   G  C PN V+Y   ++G    G   +A ++     +    P+ +TY+ V+H  
Sbjct: 218 LRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHAL 277

Query: 418 ---------------------------------GLRREGKLSEACDVVREMVKKGFFPTP 444
                                            G    G+  EA  V +EM +    P  
Sbjct: 278 CKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDV 337

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V +++L+ SLC+ GK+  A+        KG   +V ++  ++ G+  KG L +   L D 
Sbjct: 338 VTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDL 397

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      PD  T+  +I A +  G +++A  +  +M   G+ P VVTYRTVI   C++G+
Sbjct: 398 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 457

Query: 565 VEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           ++D ++   +M+ +     + AYN +I+  C+ G L +A +++ +++      D      
Sbjct: 458 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 517

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++ +    G  + A  +     N  L PD  +   + +   L GK E+A  +    V  G
Sbjct: 518 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 577

Query: 683 HIQPK 687
            I+P 
Sbjct: 578 -IEPN 581



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 153/347 (44%), Gaps = 23/347 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           AK ++  +   G+      FS ++    + G++ +A  +  +     + P+ ++ +  + 
Sbjct: 496 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMD 555

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
              +  K+ KALR  + M  AGI PNV+ Y  L+ GYC + RI + + L  EM  +G  P
Sbjct: 556 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKP 615

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
             + Y  ++                        LF   GR   AK   ++M++ G   D+
Sbjct: 616 STILYSIII----------------------DGLFQ-AGRTVPAKMKFHEMTESGIAMDI 652

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            TY  V+ G  +    D+A  + +++     K N ++    ++G+    +  EA+++  +
Sbjct: 653 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFAS 712

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
                  PN +TYS+++  L +EG + EA D+   M   G  P    +N +++ L ++ +
Sbjct: 713 ISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 772

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +  A  ++ +   +  ++  +    L+  F  KG   E +  L   Y
Sbjct: 773 IVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFLPAKY 819


>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 706

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 257/557 (46%), Gaps = 49/557 (8%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+R+LR +A  G       ++ L+  Y R G+L +A  +++ M  A   PN    NT + 
Sbjct: 143 AERMLRSLAASGAA-DVVTYNTLIAGYCRGGRLEDARLLVASMPPA---PNSYAYNTLLK 198

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    +   A   +E M      P+ LT+  LI  +C    +  A+ ++D M   GC+P
Sbjct: 199 GLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTP 258

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG---------RIEEAKELVNQM 330
             + Y  ++    +  R+KE   L   M    ++F             R E+A EL+ +M
Sbjct: 259 GAIVYNEIISCFAELGRVKEALHLFSCMPCKPDIFSYNAVLKGLCRAERWEDAGELITEM 318

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            +  C PD VT+  V++  C  G +D A +++ QM  +G KP+  +Y+A +N     G  
Sbjct: 319 VRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCV 378

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            +A E++ +      +PN + Y  V+ GL R+G+  +   ++ EMV+    P  +   L+
Sbjct: 379 EDALELLRSMP---CSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLI 435

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY---- 506
           I  LC+ G +D   + +QE  N GC+ +VV +TSL+ GF + G ++++L L   M     
Sbjct: 436 IDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMTCKPN 495

Query: 507 ----------LCKKD------------------PDTVTYTTIIDALSKNGRVEEATELMM 538
                     LCK +                  P+ +T++ +I +L + G VE A ++  
Sbjct: 496 TVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFE 555

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYL 598
           KM   G  P V+ Y T+ +   + G V++ LKLL  M  K      Y+  ++ LC     
Sbjct: 556 KMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNNMSCKAD-TICYSSALKGLCRAELW 614

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           E+AG+++ ++ R     D  T  +++ +   +G    A +V+  M      P++ +   +
Sbjct: 615 EDAGELIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSL 674

Query: 659 SERLILEGKSEEADTLM 675
                  G  E+A  L+
Sbjct: 675 INGFSEHGHLEDALKLL 691



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 220/418 (52%), Gaps = 23/418 (5%)

Query: 172 IECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           + C+P+ FSY  ++    RA +  +A  +++ M +   +P+ +  NT I  L     +  
Sbjct: 286 MPCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDC 345

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           AL  +++M   G  P+  TY+ LI  + +   ++DA++L+  MP   CSP+ V Y +V+ 
Sbjct: 346 ALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMP---CSPNTVCYKSVLK 402

Query: 290 YLCKEKRIKEVRDLMEKMV-NDS-----------NLFHDQGRIEEAKELVNQMSQMGCIP 337
            LC++ + ++V  L+ +MV ND            +    +G ++   E++ ++   GC P
Sbjct: 403 GLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSP 462

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           DVV YT+++NGF   G +D + K+ + M    CKPNTV+Y   L GLC      +A ++I
Sbjct: 463 DVVMYTSLLNGFAEYGRVDDSLKLFKSMT---CKPNTVTYNYVLMGLCKVELWEDAGKLI 519

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +    +   PN +T+S+++  L ++G +  A DV  +M   G  P  +  + L   L  +
Sbjct: 520 DEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEK 579

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G +D A K +    N  C  + + ++S ++G C+    E+A  L+ +M+     PD VT+
Sbjct: 580 GCVDNALKLLN---NMSCKADTICYSSALKGLCRAELWEDAGELIVEMFRKDCPPDEVTF 636

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           + II  L + G VE ATE+   ML     P +V Y ++I+ + + G +ED LKLL  M
Sbjct: 637 SIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGHLEDALKLLRSM 694



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/532 (25%), Positives = 247/532 (46%), Gaps = 55/532 (10%)

Query: 186 YSRAGKLRNAMYVL-SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
           + R G L  A+ ++ SM +  AV P    C   I  L    +LA A   L   + A    
Sbjct: 71  FIRLGDLDAALQLVGSMSEPPAVVP----CTLLIKKLCAAGRLADAEGVLRASEAA---- 122

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           + + +N L+ GYC   R+ DA +++  +   G + D V+Y T++   C+  R+++ R L+
Sbjct: 123 DAVDHNTLVAGYCRAGRLADAERMLRSLAASG-AADVVTYNTLIAGYCRGGRLEDARLLV 181

Query: 305 EKMVNDSNLFHDQGRIE---------EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
             M    N +     ++         +A+ELV +M++    PD +T+  +++ FC+ G +
Sbjct: 182 ASMPPAPNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLV 241

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D+A  +L +M   GC P  + Y   ++     G+  EA  + +        P+  +Y+ V
Sbjct: 242 DRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMP---CKPDIFSYNAV 298

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM-------- 467
           + GL R  +  +A +++ EMV+K   P  V  N +I  LC +G +D A + +        
Sbjct: 299 LKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGR 358

Query: 468 ----------------QECLNKG--------CAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
                           Q C+           C+ N V + S+++G C+ G  E+   L+ 
Sbjct: 359 KPDNFTYSALINAFSEQGCVEDALELLRSMPCSPNTVCYKSVLKGLCRDGQWEDVGQLIG 418

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M      PD + +  IID L + G V+   E++ ++ + G  P VV Y ++++ + + G
Sbjct: 419 EMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYG 478

Query: 564 RVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           RV+D LKL + M  K    T YN V+  LC     E+AGK++ +++      +  T  +L
Sbjct: 479 RVDDSLKLFKSMTCKPNTVT-YNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSIL 537

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           + S   KG+   A  V  +M      P++ +   ++  L  +G  + A  L+
Sbjct: 538 ISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLL 589


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 146/578 (25%), Positives = 263/578 (45%), Gaps = 52/578 (8%)

Query: 99  LRNLLRSLKPRQICAVL-RSQADERVALQF-----FYWADRQWRYRHDPIVYYMMLEILS 152
           +RN L  L P  +  VL R + D  +  +F     F++ +    ++H  +    M+ IL 
Sbjct: 69  VRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPN----FKHTSLSLSAMIHILV 124

Query: 153 KT-KLCQGAKRVLRLMARRGIE----------------CRPEAFSYLMVAYSRAGKLRNA 195
           ++ +L      +LR++ R G+                      F  L+  Y +A KLR A
Sbjct: 125 RSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREA 184

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
               ++++      ++  CN  I  LV    +  A    + +  +G+  NV T N ++  
Sbjct: 185 HEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNA 244

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
            C   +++     + ++  KG  PD V+Y T++                       + + 
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI-----------------------SAYS 281

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
            +G +EEA EL+N M   G  P V TY  V+NG C+ G+ ++AK++  +M   G  P++ 
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y + L   C  G  +E  ++ +        P+ + +S +M    R G L +A      +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            + G  P  V   +LIQ  CR+G +  A     E L +GCA++VV + +++ G C++  L
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            EA  L ++M      PD+ T T +ID   K G ++ A EL  KM  K +   VVTY T+
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +  + +VG ++   ++   M+SK+   T  +Y+ ++  LCS G+L EA ++  +++    
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           K     C+ +++ Y   G          +M +   +PD
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 238/511 (46%), Gaps = 16/511 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  V + ++R G+       + ++ A  + GK+      LS +Q+  V P+++  NT I 
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A   +  M   G +P V TYN +I G C   + + A ++  EM   G SP
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338

Query: 280 DKVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSN---LFHDQGRIEEAKELV 327
           D  +Y +++   CK+  + E          RD++  +V  S+   LF   G +++A    
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           N + + G IPD V YT ++ G+CR G +  A  +  +M   GC  + V+Y   L+GLC  
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
               EA ++ N   E    P++ T ++++ G  + G L  A ++ ++M +K      V  
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY 518

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N L+    + G +D AK+   + ++K      ++++ L+   C KG L EA  + D+M  
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P  +   ++I    ++G   +    + KM+S+G VP  ++Y T+I+ + +   +  
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638

Query: 568 LLKLLEKMLSKQKCRT----AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
              L++KM  +Q         YN ++   C    ++EA  +L K++      D ST   +
Sbjct: 639 AFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCM 698

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
           +  ++++     A+++   M  R   PD K 
Sbjct: 699 INGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 23/270 (8%)

Query: 141 PIVYYMMLEILSKTKL--CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           P  Y + + I    KL   Q A  + + M  + I      ++ L+  + + G +  A  +
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
            + M    + P  +  +  ++ L     LA+A R  + M    I P V+  N +IKGYC 
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
                D    +++M  +G  PD +SY T++    +E+ + +   L++KM           
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM----------- 646

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
             EE         Q G +PDV TY ++++GFCR  ++ +A+ +L++M   G  P+  +YT
Sbjct: 647 --EE--------EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYT 696

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
             +NG        EA  + +   +  ++P+
Sbjct: 697 CMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 25/243 (10%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           ++ R R D + Y  +L+   K      AK +   M  + I   P ++S L+ A    G L
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A  V   M    + P ++ICN+ I         +    FLE+M   G  P+ ++YN L
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626

Query: 253 IKGYCDLHRIKDAIKLIDEMPLK--GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
           I G+     +  A  L+ +M  +  G  PD  +Y +++   C++ ++KE   ++ KM+  
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI-- 684

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                                + G  PD  TYT ++NGF     L +A ++  +M   G 
Sbjct: 685 ---------------------ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723

Query: 371 KPN 373
            P+
Sbjct: 724 SPD 726



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 22/289 (7%)

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN-----------------LLI 451
           +++ S ++H L R G+LS+A   +  M+++        +N                 LLI
Sbjct: 113 SLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLI 172

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
           ++  +  K+  A +      +KG  V++    +LI    + G +E A  +  ++      
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
            +  T   +++AL K+G++E+    + ++  KG+ P +VTY T+I  Y   G +E+  +L
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292

Query: 572 LEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
           +  M  K        YN VI  LC  G  E A ++  ++LR+    D++T   L+     
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           KG  +   KV   M +R+++PDL +C   S  + L  +S   D  ++ F
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDL-VC--FSSMMSLFTRSGNLDKALMYF 398



 Score = 46.2 bits (108), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 54/260 (20%), Positives = 99/260 (38%), Gaps = 26/260 (10%)

Query: 439 GF-FP----TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           GF FP    T + ++ +I  L R G++  A+  +   + +     +    SL   F   G
Sbjct: 103 GFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCG 162

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
             +    LL   Y+  +                  ++ EA E    + SKG   ++    
Sbjct: 163 SNDSVFDLLIRTYVQAR------------------KLREAHEAFTLLRSKGFTVSIDACN 204

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRT 611
            +I    ++G VE    + +++         Y  N ++  LC  G +E+ G  L +V   
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEK 264

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
               D  T + L+ +Y +KG+   A+++   M  +   P +     V   L   GK E A
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324

Query: 672 DTLMLRFVERGHIQPKSEEH 691
             +    +  G + P S  +
Sbjct: 325 KEVFAEMLRSG-LSPDSTTY 343


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 265/558 (47%), Gaps = 19/558 (3%)

Query: 109 RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA 168
           + I  ++  Q     ALQ F WA     + H+   Y  ++  L   +  +  K VL  M 
Sbjct: 95  QHIAHLILEQKSASQALQTFRWASNLPNFIHNQSTYRALIHKLCSFRRFETVKEVLDEMP 154

Query: 169 RRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN- 225
              I   P+   F  ++    RA  +R  + VL ++ K    P+L I N+ + VLV  + 
Sbjct: 155 SS-IGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDI 213

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
            LA+   + ++M + G++ +  T+  L+KG C  +RI DA KL+  M  +G +P+ V Y 
Sbjct: 214 DLAREF-YRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYN 272

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNL--------FHDQGRIEEAKELVNQMSQMGCIP 337
           T++  LCK  ++   R LM +MV  S++        +  +  + +A  L+ +   MG +P
Sbjct: 273 TMIHALCKNGKVGRARSLMNEMVEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVP 332

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           DVVT T VV   C+ G + +  ++L+++   G   + V+Y   + G C  GK+     ++
Sbjct: 333 DVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVL 392

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
              E +   PN  TY+++  G    G L  A D+  +M   G     +  + LI+ LC  
Sbjct: 393 KDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSG 452

Query: 458 GKMDGAKKFMQ--ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           G+M+   K ++  E    G    +  + S+I G  +K   EEAL  L  M   K  P  V
Sbjct: 453 GRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKME--KLFPRAV 510

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
             +  I      G + +A  +  +M+ +G VP+V+ Y  +IH +CQ G V +  +L+ +M
Sbjct: 511 DRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEM 570

Query: 576 LSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           +      TA  +N +I   C  G +  A K++  ++      D  +   +V++  NKG  
Sbjct: 571 VDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDF 630

Query: 634 LLAYKVACRMFNRNLIPD 651
             A ++  +M  ++++PD
Sbjct: 631 QKAVRLFLQMVEKDILPD 648



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 203/421 (48%), Gaps = 24/421 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + ++Y  M+  L K      A+ ++  M    +E     F+ L+ AY +   L  A+ +L
Sbjct: 267 NTVIYNTMIHALCKNGKVGRARSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLL 322

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
                    P+++     + +L    ++ + +  LER++  G   +V+ YN LIKG+C L
Sbjct: 323 EKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCML 382

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFH 315
            + K   +++ +M +KGC P+  +Y  +    C    +    DL   M    +N + + +
Sbjct: 383 GKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTY 442

Query: 316 DQ--------GRIEEAKELVNQM--SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
           D         GR+E+  +++  M  S+ G    +  Y +++ G  +  + ++A + L +M
Sbjct: 443 DTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKM 502

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
                 P  V  +  + G C+ G   +A+ + +   +E   P+ + Y  ++HG  ++G +
Sbjct: 503 --EKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNV 560

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA +++ EMV  G+FPT    N LI + C +GK+  A K M++ + +GC  ++ +++ +
Sbjct: 561 REAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPM 620

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           +   C KGD ++A+ L   + + +KD  PD  T+ +++  L++     E   L    L  
Sbjct: 621 VDALCNKGDFQKAVRLF--LQMVEKDILPDYSTWNSMLLCLTQETVWLEGDNLFHLQLQD 678

Query: 544 G 544
           G
Sbjct: 679 G 679



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 219/476 (46%), Gaps = 27/476 (5%)

Query: 230 ALRFLERMQLAGITPNVL----TYNCLIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSY 284
           A + L+  + A   PN +    TY  LI   C   R +   +++DEMP   G  PD+  +
Sbjct: 107 ASQALQTFRWASNLPNFIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIF 166

Query: 285 YTVMGYLCKEKRIKE---VRDLMEKMVNDSNL--FHD------QGRIEEAKELV-NQMSQ 332
            T++  L + + +++   V DL+ K   + +L  F+       +  I+ A+E    +M  
Sbjct: 167 VTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDIDLAREFYRKKMMM 226

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G   D  T+  ++ G C    +  A K+LQ M   G  PNTV Y   ++ LC NGK   
Sbjct: 227 NGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGR 286

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           AR ++N    E   P+ +T++V++    +E  L +A  ++ +    GF P  V    ++ 
Sbjct: 287 ARSLMN----EMVEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVG 342

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+ G++    + ++   + G  V+VV + +LI+GFC  G  +    +L DM +    P
Sbjct: 343 ILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLP 402

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           +  TY  +      +G ++ A +L   M + G+    +TY T+I   C  GR+ED  K+L
Sbjct: 403 NVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKIL 462

Query: 573 EKMLSKQKCR----TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           E M   +       + YN +I  L      EEA + L K+ +   +A   +  +L   + 
Sbjct: 463 ELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRIL--GFC 520

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           N+G    A +V  +M     +P + +   +      +G   EA  L+   V+ G+ 
Sbjct: 521 NEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYF 576



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/303 (20%), Positives = 125/303 (41%), Gaps = 10/303 (3%)

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK-KGFFPTPV 445
           N  ++    ++N   +   T    T+  + H +  +   S+A    R       F     
Sbjct: 69  NVSNIGRSSVVNLQSKPISTTPVPTHQHIAHLILEQKSASQALQTFRWASNLPNFIHNQS 128

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNK-GCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
               LI  LC   + +  K+ + E  +  G   +   F +++RG  +   + + + +LD 
Sbjct: 129 TYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDL 188

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELM-MKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +    ++P    + +I+D L K   ++ A E    KM+  G+     T+  ++   C   
Sbjct: 189 ITKFGENPSLKIFNSILDVLVKE-DIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTN 247

Query: 564 RVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           R+ D  KLL+ M S+ K      YN +I  LC  G +  A  ++ +++  +      T +
Sbjct: 248 RIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVEPSD----VTFN 303

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
           VL+ +Y  +   + A  +  + F+   +PD+    KV   L   G+  E   ++ R    
Sbjct: 304 VLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESM 363

Query: 682 GHI 684
           G +
Sbjct: 364 GGV 366


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 219/441 (49%), Gaps = 22/441 (4%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV----VGNKLAKALRFLERM 237
           L+  +  AG++R+A+  L  M+K++ +      N  +  L       N+L +A+ F + M
Sbjct: 108 LLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEM 167

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           + +G+ P++ +Y+ L+    D  R+ +A  L   M    CSPD ++Y  +M   CK  + 
Sbjct: 168 KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQT 224

Query: 298 KEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            E + LM++++               N +    ++EEA E+  +M +  C+P+ VT+  +
Sbjct: 225 YEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL 284

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN-GKSLEAREMINTSEEEW 404
           + GFC+ G L+ A K+  +M   GCK   V+Y   ++ LC   G    A ++ N  E   
Sbjct: 285 IAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG 344

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
            TP  +TY+ ++ G     +LSEA     EM  K   P  +  ++LI  LC+  +M  A 
Sbjct: 345 LTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAA 403

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           K +++    G    VV +  LI GFC+ G+L+ AL   + M L    P+TV + T+ID L
Sbjct: 404 KTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGL 463

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA 584
            K  R  +   L+  M ++G  P V+TY  +I   C   RVED  +L + M       T 
Sbjct: 464 CKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACAPNV-TT 522

Query: 585 YNQVIENLCSFGYLEEAGKIL 605
           +N +I  LC+   +EEA  IL
Sbjct: 523 FNFLIRGLCAQKKVEEARNIL 543



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 234/472 (49%), Gaps = 25/472 (5%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P A +Y  L+  + + G++  A+ V S M+ + + PN    NT +  L    +++ AL+ 
Sbjct: 30  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 89

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
              MQ     P   ++N L++G+    R++DA+  + +M     S    +Y  V+  LC 
Sbjct: 90  FREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCW 149

Query: 294 E----KRIKEVRDLMEKMVN-----DSNLFH-------DQGRIEEAKELVNQMSQMGCIP 337
           E     R+++  +  ++M       D   +H       D GR+ EA  L    S M C P
Sbjct: 150 ENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHAL---FSAMTCSP 206

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D++TY  +++G+C++G+  +A+ +++++   G +PN  +Y+  +N  C   K  EA E+ 
Sbjct: 207 DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVF 266

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
               E    PNA+T++ ++ G  + G L +A  +  EM K G   T V  N LI SLC++
Sbjct: 267 MKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKK 326

Query: 458 -GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            G +  A     +    G    +V + SLI+GFC    L EA+   D+M   K  P+ +T
Sbjct: 327 RGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEME-GKCAPNVIT 385

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM- 575
           Y+ +ID L K  R++EA + +  M + G  PTVVTY  +I+ +C+ G ++  L   EKM 
Sbjct: 386 YSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMK 445

Query: 576 LSKQKCRTA-YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           L+     T  +N +I+ LC      +  ++L  +     K D  T + L+  
Sbjct: 446 LAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISG 497



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 197/411 (47%), Gaps = 25/411 (6%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N  +  LV   K  +ALR  + +      PN  TYN LI+G+C   ++  A+ +  +M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEE 322
            G  P+  +  T++  LC+  ++     L  +M     L            F   GR+ +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFC----RVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           A   +  M +        TY  V+ G C        L+QA +  ++M   G +P+  SY 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             L+ L  +G+  EA  + +       +P+ +TY+V+M G  + G+  EA  +++E++K 
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G+ P     +++I   C+  K++ A +   + +   C  N V F +LI GFC+ G LE+A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKN-GRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           + L  +M         VTY T+ID+L K  G V  A +L  K+   GL PT+VTY ++I 
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKIL 605
            +C   R+ + ++  ++M  + KC      Y+ +I+ LC    ++EA K L
Sbjct: 358 GFCDARRLSEAMQYFDEM--EGKCAPNVITYSILIDGLCKVRRMKEAAKTL 406



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 181/396 (45%), Gaps = 33/396 (8%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSM 201
           Y+++L  LS +     A  +   M      C P+  +Y  LM  Y + G+   A  ++  
Sbjct: 179 YHILLSALSDSGRMAEAHALFSAMT-----CSPDIMTYNVLMDGYCKIGQTYEAQSLMKE 233

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           + KA   PN+   +  I+     +K+ +A     +M  +   PN +T+N LI G+C    
Sbjct: 234 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGM 293

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           ++DAIKL  EM   GC    V+Y T++  LCK++                      G + 
Sbjct: 294 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR----------------------GGVY 331

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A +L N++   G  P +VTY +++ GFC    L +A +   +M    C PN ++Y+  +
Sbjct: 332 TAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILI 390

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +GLC   +  EA + +   +   +TP  +TY  +++G  + G+L  A     +M   G  
Sbjct: 391 DGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCA 450

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N LI  LC+  + +   + +     +GC  +V+ +  LI G C    +E+A  L
Sbjct: 451 PNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 510

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
            D M      P+  T+  +I  L    +VEEA  ++
Sbjct: 511 FDGMACA---PNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 145/300 (48%), Gaps = 9/300 (3%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P+  TY  ++ GFC+ G++ QA  +   M   G  PN  +    L GLC  G+   A ++
Sbjct: 30  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 89

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
               +   + P + ++++++ G    G++ +A   +++M K          NL+++ LC 
Sbjct: 90  FREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCW 149

Query: 457 EGK----MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           E K    ++ A +F +E    G   ++ ++  L+      G + EA +L   M      P
Sbjct: 150 ENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTC---SP 206

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D +TY  ++D   K G+  EA  LM ++L  G  P V TY  +I+ YC++ +VE+  ++ 
Sbjct: 207 DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVF 266

Query: 573 EKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
            KM+       A  +N +I   C  G LE+A K+  ++ +   KA   T + L++S   K
Sbjct: 267 MKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKK 326



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 5/277 (1%)

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           A L+GL    K  +A  +        + PNA TY+V++ G  + G++ +A  V  +M   
Sbjct: 2   ALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS 61

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P    +N L+  LC  G+M  A K  +E           +   L+RGF   G + +A
Sbjct: 62  GLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDA 121

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDAL----SKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           L+ L DM        T TY  ++  L        R+E+A E   +M + G+ P + +Y  
Sbjct: 122 LAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHI 181

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           ++      GR+ +   L   M       T YN +++  C  G   EA  ++ ++L+   +
Sbjct: 182 LLSALSDSGRMAEAHALFSAMTCSPDIMT-YNVLMDGYCKIGQTYEAQSLMKEILKAGYE 240

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            +  T  +++  Y        A++V  +M   N +P+
Sbjct: 241 PNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPN 277



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 94/177 (53%), Gaps = 3/177 (1%)

Query: 129 YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR 188
           Y+ + + +   + I Y ++++ L K +  + A + L  M   G       +  L+  + +
Sbjct: 371 YFDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCK 430

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
            G+L++A+     M+ A  APN +I NT I  L    +    LR L  M   G  P+V+T
Sbjct: 431 CGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVIT 490

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           YNCLI G C  +R++DA +L D M    C+P+  ++  ++  LC +K+++E R++++
Sbjct: 491 YNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 9/242 (3%)

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N L+  L    K D A +  +E L    A N   +  LIRGFC+ G + +A+S+  DM  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+  T  T++  L + G++  A +L  +M +   +PT  ++  ++  +   GRV D
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 568 LLKLLEKM--LSKQKCRTAYNQVIENLC----SFGYLEEAGKILGKVLRTASKADASTCH 621
            L  L+ M   S       YN V++ LC    S   LE+A +   ++  +  + D  + H
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
           +L+ +  + G    A+ +   M      PD+     + +     G++ EA +LM   ++ 
Sbjct: 181 ILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 682 GH 683
           G+
Sbjct: 238 GY 239


>gi|302143623|emb|CBI22376.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 210/421 (49%), Gaps = 25/421 (5%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GKL NA  ++ +M +    P    C   I  L+      +A R L+ M ++G  P+++TY
Sbjct: 144 GKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIITY 203

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N L+ G C    +K AI+L+DEM L GC PD ++Y T++                     
Sbjct: 204 NMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTIL--------------------- 242

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                 D G  ++A        + GC   ++TYT ++   C+     QA ++L+ M   G
Sbjct: 243 --RCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEG 300

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
           C P+ V+Y + +N  C  GK  +   +I         PN +TY+ ++H L   G   E  
Sbjct: 301 CYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVD 360

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           +++  M      PT V  N+LI  LC+ G +D A  F  + ++  C  +++ + +L+   
Sbjct: 361 EILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAAL 420

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C++G ++EAL LL  +   +  P  +TY  +ID L+K G +E+A EL  +M+ +G  P  
Sbjct: 421 CKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDD 480

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK--CRTAYNQVIENLCSFGYLEEAGKILGK 607
           +T+RT+     ++  VED L +L++M  + +    +A+  VI  LC+ G +EEA ++  K
Sbjct: 481 ITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEEANQLHQK 540

Query: 608 V 608
           +
Sbjct: 541 L 541



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 172/353 (48%), Gaps = 16/353 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A RVL++M   G    P+  +Y M+     + G L+ A+ +L  M  +   P+ +  NT 
Sbjct: 184 ATRVLKIMVMSG--GIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTI 241

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +  +       +A+ F +     G    ++TY  LI+  C       A++++++M ++GC
Sbjct: 242 LRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGC 301

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKE 325
            PD V+Y +++ Y CK+ + ++   ++  +         V  + L H     G  +E  E
Sbjct: 302 YPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDE 361

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++  M+     P VVTY  ++NG C+ G LD+A     QM  H C P+ ++Y   L  LC
Sbjct: 362 ILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALC 421

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   EA  ++++  +   +P  ITY++V+ GL ++G + +A ++  EM+++GF P  +
Sbjct: 422 KEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDI 481

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
               L   L R   ++ A   ++E   +   +    F  +I G C  G +EEA
Sbjct: 482 THRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEEA 534



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 167/338 (49%), Gaps = 4/338 (1%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G++  A  L++ M++   IP   +   ++ G  ++   ++A ++L+ M   G  P+ ++
Sbjct: 143 KGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIIT 202

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   + GLC  G    A E+++        P+AITY+ ++  +   G   +A    ++ +
Sbjct: 203 YNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQL 262

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +KG     +   +LI+ +C+      A + +++   +GC  ++V + SL+   C++G  E
Sbjct: 263 RKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYE 322

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +   ++ ++      P+TVTY T++ +L  +G  +E  E+++ M +    PTVVTY  +I
Sbjct: 323 DTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILI 382

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +  C+ G ++  +   ++M+S   C      YN ++  LC  G ++EA  +L  +  T  
Sbjct: 383 NGLCKYGLLDRAINFFDQMVS-HNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRC 441

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
                T +++++    KG    A ++   M  R   PD
Sbjct: 442 SPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPD 479



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 158/347 (45%), Gaps = 2/347 (0%)

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D  T   ++   C  G+L  A +++  M      P   S    + GL     +  A  ++
Sbjct: 129 DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 188

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
                    P+ ITY++++ GL ++G L  A +++ EM   G  P  +  N +++ +   
Sbjct: 189 KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDH 248

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G  D A  F ++ L KGC   ++ +T LI   C+     +A+ +L+DM +    PD VTY
Sbjct: 249 GGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTY 308

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE--DLLKLLEKM 575
            ++++   K G+ E+   ++  +LS G+ P  VTY T++H  C  G  +  D + L+   
Sbjct: 309 NSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNT 368

Query: 576 LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
            S+      YN +I  LC +G L+ A     +++      D  T + L+ +   +G+   
Sbjct: 369 TSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDE 428

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           A  +   + +    P L     V + L  +G  E+A  L    +ERG
Sbjct: 429 ALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERG 475



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 131/302 (43%), Gaps = 27/302 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY-LMVAYS-RAGKLRNAMYVL 199
           I Y +++E++ K      A  VL  MA  G  C P+  +Y  +V Y+ + GK  +   ++
Sbjct: 271 ITYTVLIELVCKHCGTVQAMEVLEDMAIEG--CYPDIVTYNSLVNYTCKQGKYEDTALII 328

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +    + PN +  NT +H L       +    L  M      P V+TYN LI G C  
Sbjct: 329 YNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKY 388

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             +  AI   D+M    C PD ++Y T++  LCKE                       G 
Sbjct: 389 GLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKE-----------------------GM 425

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++EA  L++ ++   C P ++TY  V++G  + G +++A ++  +M   G  P+ +++  
Sbjct: 426 VDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRT 485

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
              GL       +A  ++    +         +  V+HGL   G + EA  + +++ +  
Sbjct: 486 LFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEEANQLHQKLTELK 545

Query: 440 FF 441
            F
Sbjct: 546 VF 547


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 240/490 (48%), Gaps = 54/490 (11%)

Query: 140 DPIVYYMMLEILSKTKLC-QGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAM 196
           D + Y  +L  L +   C   A  +LR+MA    E RP A SY  LM A     +   A+
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAH---ETRPTAVSYTTLMRALCAERRTGQAV 133

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  MQ + V P+++   T I  L     + KA+  L  M  +GI PNV+ Y+CL++GY
Sbjct: 134 GLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGY 193

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
           C   R +   K+ +EM  +G  PD V Y  ++  LC+E ++K+   +M+KM+        
Sbjct: 194 CKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNV 253

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  N    +G ++EA  L N M + G   D VTY  ++ G   V E+D+A  +L++
Sbjct: 254 VTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEE 313

Query: 365 MYHHG--CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           M H     +PN V++ + ++GLC  G+  +A ++ +   E     N +T+++++ GL R 
Sbjct: 314 MIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRV 373

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            K+ +A +++ EM   G  P     ++LI   C+  ++D A+  + +    G    +V++
Sbjct: 374 HKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHY 433

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYL-CKKD------------------------------ 511
             L+   C++G +E+A +  D+M+  CK D                              
Sbjct: 434 IPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDE 493

Query: 512 ---PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD+VTY+ +I+  + +G +  A  ++ +M + G VP V  + ++I  Y   G  E +
Sbjct: 494 GLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKV 553

Query: 569 LKLLEKMLSK 578
           L+L+ +M +K
Sbjct: 554 LELIREMTAK 563



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 233/501 (46%), Gaps = 35/501 (6%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +++ ++ A  R G   +A   L  +      P  +   T +  L    +  +A+  L  M
Sbjct: 80  SYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDM 139

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           Q +G+ P+V+TY  LI+G CD   +  A++L+ EM   G  P+ V Y  ++   CK    
Sbjct: 140 QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK---- 195

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                               GR E   ++  +MS  G  PDVV YT +++  CR G++ +
Sbjct: 196 -------------------AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKK 236

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A +++ +M   G +PN V+Y   +N +C  G   EA  + N   E+    +A+TY+ ++ 
Sbjct: 237 ATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLIT 296

Query: 418 GLRREGKLSEACDVVREMVKKGFF--PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           GL    ++ EA  ++ EM+       P  V  N +I  LC+ G+M  A +        GC
Sbjct: 297 GLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGC 356

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
           A N+V F  LI G  +   +++A+ L+D+M     +PD+ TY+ +I+   K  +V+ A  
Sbjct: 357 ACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAES 416

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENL 592
           L+ KM   G+ P +V Y  ++   C+ G +E      ++M   + C+    AY+ +I   
Sbjct: 417 LLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM--HKNCKLDVVAYSTMIHGA 474

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C     + A + L  +L      D+ T  +L+  + N G    A +V  +M     +PD+
Sbjct: 475 CRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDV 534

Query: 653 KLCKKVSERLILEGKSEEADT 673
            +        +++G   + DT
Sbjct: 535 AVFDS-----LIKGYGAKGDT 550



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 213/441 (48%), Gaps = 26/441 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +VY  +L+   K    +   +V   M+ RGIE     ++ L+ +  R GK++ A  V+  
Sbjct: 184 VVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDK 243

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  + PN++  N  I+ +     + +A+     M   G+  + +TYN LI G   +  
Sbjct: 244 MMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLE 303

Query: 262 IKDAIKLIDEMPLKG---CSPDKVSYYTVMGYLCKEKRIKE---VRDLMEKMVNDSNLFH 315
           + +A+ L++EM + G     P+ V++ +V+  LCK  R+++   VRD+M +     NL  
Sbjct: 304 MDEAMGLLEEM-IHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVT 362

Query: 316 DQ---------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                       ++++A EL+++M+  G  PD  TY+ ++NGFC++ ++D+A+ +L +M 
Sbjct: 363 FNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMR 422

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G +P  V Y   L  LC  G   +AR   +   +     + + YS ++HG  R     
Sbjct: 423 RDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRDRK 481

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
            A + ++ M+ +G  P  V  ++LI      G +  A++ +++    G   +V  F SLI
Sbjct: 482 SAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLI 541

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM------ 540
           +G+  KGD E+ L L+ +M       D+   +TI   L  N    E   L+  +      
Sbjct: 542 KGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVAN---NEGKALLQSVPGFDTE 598

Query: 541 LSKGLVPTVVTYRTVIHRYCQ 561
           +SKG V +      ++H+ C 
Sbjct: 599 VSKGAVISSHELTNMLHKLCN 619



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 158/326 (48%), Gaps = 4/326 (1%)

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           +S +  + D V+Y  V+   CR G    A   L ++  H  +P  VSYT  +  LC   +
Sbjct: 69  LSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERR 128

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
           + +A  ++   +     P+ +TY  ++ GL     + +A +++REM + G  P  V  + 
Sbjct: 129 TGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSC 188

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L+Q  C+ G+ +   K  +E   +G   +VV +T LI   C++G +++A  ++D M    
Sbjct: 189 LLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERG 248

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
            +P+ VTY  +I+++ K G V+EA  L   ML KG+    VTY T+I     V  +++ +
Sbjct: 249 LEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAM 308

Query: 570 KLLEKMLSKQKC----RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            LLE+M+  +         +N VI  LC  G + +A ++   +       +  T ++L+ 
Sbjct: 309 GLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIG 368

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPD 651
             L       A ++   M +  L PD
Sbjct: 369 GLLRVHKVKKAMELMDEMASSGLEPD 394



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 37/240 (15%)

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N ++ +LCR+G    A  F+   +        V++T+L+R  C +    +A+ LL D
Sbjct: 79  VSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRD 138

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      PD VTY T+I  L     V++A EL+ +M   G+ P VV Y  ++  YC+ GR
Sbjct: 139 MQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGR 198

Query: 565 VEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
            E + K+ E+M  +  +     Y  +I++LC  G +++A +++ K               
Sbjct: 199 WECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDK--------------- 243

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                               M  R L P++     +   +  EG  +EA +L    +E+G
Sbjct: 244 --------------------MMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKG 283



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 9/222 (4%)

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A  F+   L +G A        L+R       L E+ +LL  +   +   D V+Y T++ 
Sbjct: 34  AAPFLAVLLRRGRAEASARLNRLLRLV----PLPESPALLSSLPSVR---DAVSYNTVLA 86

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QK 580
           AL + G   +A   ++++++    PT V+Y T++   C   R    + LL  M +   + 
Sbjct: 87  ALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRP 146

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               Y  +I  LC    +++A ++L ++  +  + +      L++ Y   G      KV 
Sbjct: 147 DVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVF 206

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             M  R + PD+ +   + + L  EGK ++A  +M + +ERG
Sbjct: 207 EEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERG 248


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 221/437 (50%), Gaps = 16/437 (3%)

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL+ + K  +   ++  NT I+ L    K  +A+   + M   G  P+V TY  +I G C
Sbjct: 179 VLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLC 238

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNLF 314
            +     A  L  +M   GC PD V+Y T++  LCK++R+ E  D+   M       N+F
Sbjct: 239 KIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIF 298

Query: 315 HDQGRIE---------EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                I+         EA  ++N+M  +  +P++VT++ ++N FC+ G + +A+ +L+ M
Sbjct: 299 TYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTM 358

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G +PN V+Y++ +NG     + +EAR++ +    +   P+  +Y+++++G  +  ++
Sbjct: 359 TEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRI 418

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA  +  EM+ +G  P  V  N LI  LC+ G++  A    +  L  G   ++  ++ L
Sbjct: 419 GEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSIL 478

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           + GFC++G L +A  L   M      P+ V Y  +IDA+ K+  ++EA +L  ++  +GL
Sbjct: 479 LDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGL 538

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAG 602
            P V  Y T+I+  C+ G +++ L+    M  +  C     +YN +I           A 
Sbjct: 539 QPNVQIYTTIINGLCKEGLLDEALEAFRNM-EEDGCPPNEFSYNVIIRGFLQHKDESRAV 597

Query: 603 KILGKVLRTASKADAST 619
           +++G++      AD +T
Sbjct: 598 QLIGEMREKGFVADVAT 614



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 200/397 (50%), Gaps = 12/397 (3%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  RG +     ++ ++    + G+   A  +   M +A   P+++  +T I  L    +
Sbjct: 218 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRR 277

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +AL     M+  GI+PN+ TYN LI+G C+  R ++A  +++EM      P+ V++  
Sbjct: 278 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 337

Query: 287 VMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMG 334
           ++   CKE  + E R +++ M         V  S+L +    Q  + EA++L + M   G
Sbjct: 338 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKG 397

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C PDV +Y  ++NG+C+   + +AK++  +M H G  P+ VSY   ++GLC  G+  EA 
Sbjct: 398 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 457

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           ++          P+  TYS+++ G  ++G L++A  + R M      P  V  N+LI ++
Sbjct: 458 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 517

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+   +  A+K   E   +G   NV  +T++I G C++G L+EAL    +M      P+ 
Sbjct: 518 CKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNE 577

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            +Y  II    ++     A +L+ +M  KG V  V T
Sbjct: 578 FSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 218/439 (49%), Gaps = 25/439 (5%)

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
           ++M+LAG++P+  T + LI  +  L R+     ++ ++   G     V++ T++  LCK 
Sbjct: 146 KQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCK- 204

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
                                  G+  +A EL + M   G  PDV TYT ++NG C++GE
Sbjct: 205 ----------------------VGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGE 242

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
              A  + ++M   GC+P+ V+Y+  ++ LC + +  EA ++ +  + +  +PN  TY+ 
Sbjct: 243 TVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNS 302

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ GL    +  EA  ++ EM+     P  V  +LLI   C+EG +  A+  ++     G
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMG 362

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              NVV ++SL+ G+  + ++ EA  L D M      PD  +Y  +I+   K  R+ EA 
Sbjct: 363 VEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 422

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENL 592
           +L  +M+ +GL P +V+Y T+I   CQ+GR+ +   L + ML+         Y+ +++  
Sbjct: 423 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGF 482

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  GYL +A ++   +  T  K +    ++L+++         A K+   +F + L P++
Sbjct: 483 CKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNV 542

Query: 653 KLCKKVSERLILEGKSEEA 671
           ++   +   L  EG  +EA
Sbjct: 543 QIYTTIINGLCKEGLLDEA 561



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 217/435 (49%), Gaps = 14/435 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D    +M++    + +       VL  + + G++     F+ L+    + GK   A+ + 
Sbjct: 156 DTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELF 215

Query: 200 SMMQKAAVAPNLLICNTAIHVLV-VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
             M      P++    T I+ L  +G  +A A  F  +M  AG  P+V+TY+ +I   C 
Sbjct: 216 DDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLF-RKMGEAGCQPDVVTYSTIIDSLCK 274

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
             R+ +A+ +   M  KG SP+  +Y +++  LC   R +E   ++ +M++ +       
Sbjct: 275 DRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVT 334

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                N+F  +G + EA+ ++  M++MG  P+VVTY++++NG+    E+ +A+K+   M 
Sbjct: 335 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMI 394

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             GCKP+  SY   +NG C   +  EA+++ N    +  TP+ ++Y+ ++ GL + G+L 
Sbjct: 395 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 454

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA D+ + M+  G  P     ++L+   C++G +  A +  +   +     N+V +  LI
Sbjct: 455 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 514

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
              C+  +L+EA  L  ++++    P+   YTTII+ L K G ++EA E    M   G  
Sbjct: 515 DAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCP 574

Query: 547 PTVVTYRTVIHRYCQ 561
           P   +Y  +I  + Q
Sbjct: 575 PNEFSYNVIIRGFLQ 589



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 215/465 (46%), Gaps = 15/465 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           F+ L+ A  +     +A+  LS  M+ A ++P+    +  I+      ++      L ++
Sbjct: 124 FNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKI 183

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G+   ++T+N LI G C + +   A++L D+M  +G  PD  +Y T++  LCK    
Sbjct: 184 IKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGET 243

Query: 298 KEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
                L  KM         V  S +        R+ EA ++ + M   G  P++ TY ++
Sbjct: 244 VAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSL 303

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           + G C      +A  ML +M      PN V+++  +N  C  G   EAR ++ T  E   
Sbjct: 304 IQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGV 363

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            PN +TYS +M+G   + ++ EA  +   M+ KG  P     N+LI   C+  ++  AK+
Sbjct: 364 EPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQ 423

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
              E +++G   ++V++ +LI G CQ G L EA  L  +M      PD  TY+ ++D   
Sbjct: 424 LFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFC 483

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
           K G + +A  L   M S  L P +V Y  +I   C+   +++  KL  ++  +  Q    
Sbjct: 484 KQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQ 543

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
            Y  +I  LC  G L+EA +    +       +  + +V++  +L
Sbjct: 544 IYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFL 588



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 219/463 (47%), Gaps = 27/463 (5%)

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA-IKLIDEMPLKGCSPDKVSYYTVM 288
           AL +   M      P ++ +N L+     +    DA I L  +M L G SPD  + + ++
Sbjct: 105 ALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLI 164

Query: 289 GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
                                  N F    R++    ++ ++ ++G    +VT+  ++NG
Sbjct: 165 -----------------------NCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLING 201

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
            C+VG+  QA ++   M   G +P+  +YT  +NGLC  G+++ A  +     E    P+
Sbjct: 202 LCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPD 261

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
            +TYS ++  L ++ +++EA D+   M  KG  P     N LIQ LC   +   A   + 
Sbjct: 262 VVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLN 321

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E ++     N+V F+ LI  FC++G++ EA  +L  M     +P+ VTY+++++  S   
Sbjct: 322 EMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQA 381

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYN 586
            V EA +L   M++KG  P V +Y  +I+ YC+  R+ +  +L  +M+ +       +YN
Sbjct: 382 EVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYN 441

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I+ LC  G L EA  +   +L   +  D  T  +L++ +  +G    A+++   M + 
Sbjct: 442 TLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQST 501

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
            L P++ +   + + +      +EA  L      +G +QP  +
Sbjct: 502 YLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG-LQPNVQ 543



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 172/368 (46%), Gaps = 27/368 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  +++ L K +    A  +   M  +GI   P  F+Y  L+       + R A  
Sbjct: 261 DVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGIS--PNIFTYNSLIQGLCNFSRWREASA 318

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L+ M    + PN++  +  I++      + +A   L+ M   G+ PNV+TY+ L+ GY 
Sbjct: 319 MLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYS 378

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               + +A KL D M  KGC PD  SY  ++   CK KRI                    
Sbjct: 379 LQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIG------------------- 419

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
               EAK+L N+M   G  PD+V+Y  +++G C++G L +A  + + M  +G  P+  +Y
Sbjct: 420 ----EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTY 475

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +  L+G C  G   +A  +    +  +  PN + Y++++  + +   L EA  +  E+  
Sbjct: 476 SILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFV 535

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P       +I  LC+EG +D A +  +     GC  N  ++  +IRGF Q  D   
Sbjct: 536 QGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESR 595

Query: 498 ALSLLDDM 505
           A+ L+ +M
Sbjct: 596 AVQLIGEM 603


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 160/639 (25%), Positives = 295/639 (46%), Gaps = 63/639 (9%)

Query: 104 RSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
           +SL P+ +  +L+S+ + R A   F  A R   Y H  +VY+ +L  LS+ ++     R+
Sbjct: 6   KSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRI 65

Query: 164 LRL------------------------MARRGIE----------CRPEAFSY--LMVAYS 187
           + L                        M  R ++          C P   SY  L+ A+ 
Sbjct: 66  VELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFV 125

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
            A +      + +  + A VAPNL   N  I +     +  KA  FL  M   G  P+V 
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVF 185

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           +Y+ +I       ++ DA++L DEM  +  +PD   Y  ++    KEK  K    L +K+
Sbjct: 186 SYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKL 245

Query: 308 VNDSNLFHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
           + DS+++ +              GR+++  ++ ++M Q     D+ TY+++++G C  G 
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGN 305

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           +D+A+ +  ++       + V+Y   L G C  GK  E+ E+    E+   + N ++Y++
Sbjct: 306 VDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQR-NSVNIVSYNI 364

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ GL   GK+ EA  + R M  KG+        + I  LC  G ++ A   MQE  +KG
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKG 424

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
             ++V  + S+I   C+K  LEEA +L+ +M     + ++     +I  L ++ R+ +A+
Sbjct: 425 GHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDAS 484

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS---KQKCRTAYNQVIEN 591
            LM  M   G +PTVV+Y  +I   C+ G+  +    +++ML    K   +T Y+ ++  
Sbjct: 485 LLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKT-YSILLGG 543

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC    +E A ++  + L++  + D    ++L+    + G    A  V   M +RN   +
Sbjct: 544 LCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603

Query: 652 LKLCKKVSERLILEGKSEEAD----TLMLRFVERGHIQP 686
           L     V+   ++EG  +  D    T++  ++ +  +QP
Sbjct: 604 L-----VTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQP 637



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 224/487 (45%), Gaps = 21/487 (4%)

Query: 124 ALQFFYWADRQWR--YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           A  F  W    W+  ++ D   Y  ++  L+KT     A  +   M+ R +      ++ 
Sbjct: 168 ARGFLNW---MWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNI 224

Query: 182 LMVAYSRAGKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
           L+  + +    + AM +   +++ ++V PN+   N  I  L    ++   L+  +RM+  
Sbjct: 225 LIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQN 284

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
               ++ TY+ LI G CD   +  A  + +E+  +    D V+Y T++G  C+  +IKE 
Sbjct: 285 EREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKES 344

Query: 301 RDLMEKMV--NDSNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            +L   M   N  N+           + G+I+EA  +   M   G   D  TY   ++G 
Sbjct: 345 LELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGL 404

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C  G +++A  ++Q++   G   +  +Y + ++ LC   +  EA  ++    +     N+
Sbjct: 405 CVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNS 464

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
              + ++ GL R+ +LS+A  ++R M K G  PT V  N+LI  LC  GK   A  F++E
Sbjct: 465 HVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKE 524

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            L  G   ++  ++ L+ G C+   +E AL L         +PD + +  +I  L   G+
Sbjct: 525 MLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGK 584

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV---GRVEDLLKLLEKMLSKQKCRTAYN 586
           +++A  +M  M  +     +VTY T++  Y +V    R   +   + KM   Q    +YN
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKM-GLQPDIISYN 643

Query: 587 QVIENLC 593
            +++ LC
Sbjct: 644 TILKGLC 650



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 177/385 (45%), Gaps = 28/385 (7%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            ++ ++  + R GK++ ++ +  +M++   + N++  N  I  L+   K+ +A      M
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLM 385

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G   +  TY   I G C    +  A+ ++ E+  KG   D  +Y +++  LCK++R+
Sbjct: 386 PAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRL 445

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                                  EEA  LV +MS+ G   +     A++ G  R   L  
Sbjct: 446 -----------------------EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSD 482

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  +++ M  +GC P  VSY   + GLC  GK  EA   +    E    P+  TYS+++ 
Sbjct: 483 ASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLG 542

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           GL R+ K+  A ++  + ++ G  P  +  N+LI  LC  GK+D A   M    ++ C  
Sbjct: 543 GLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA 602

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           N+V + +L+ G+ +  D   A  +   MY     PD ++Y TI+  L    RV  A E  
Sbjct: 603 NLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFF 662

Query: 538 MKMLSKGLVPTVVTY----RTVIHR 558
               + G+ PTV T+    R V++R
Sbjct: 663 DDARNHGIFPTVYTWNILVRAVVNR 687


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 228/485 (47%), Gaps = 33/485 (6%)

Query: 124 ALQFFYWADRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           AL FF+      R    P +  +  +L  L+K K       +   M   G+       + 
Sbjct: 53  ALHFFHL---MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNI 109

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+       +LR      + + +   +PN++  NT I  L + +++++A R   RMQ  G
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK------GCSPDKVSYYTVMGYLCKEK 295
            TP+V+TY  LIKG C    I  A+KL  EM          C P+ ++Y  ++  LCK  
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 296 RIKEVRDLMEKMVN---------DSNLFHD-------------QGRIEEAKELVNQMSQM 333
           R  E + L E+M           D  L  D             +G++ EAK+L+  M + 
Sbjct: 230 REDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 289

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G +PD+VTY +++ GFC VG+L+ A+++   M   GC+P+ +SY   +NG     K  EA
Sbjct: 290 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 349

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            ++ N        PN ITY  ++ G+   GK+ +A  +   M   G         + +  
Sbjct: 350 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG 409

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           LC+   +  A K   E  +    + + N   LI G C+ G LE A  L + +     +P+
Sbjct: 410 LCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPN 469

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VTYT +I    + G+V++A  L+ KM + G  P ++TY T++  + +  ++E++++LL 
Sbjct: 470 VVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH 529

Query: 574 KMLSK 578
           +M  K
Sbjct: 530 RMAQK 534



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 230/515 (44%), Gaps = 46/515 (8%)

Query: 189 AGKLRNA-MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           A  +RN+ +  L     A  +PN  I     H          AL F   M  +  TP++ 
Sbjct: 11  ASSIRNSNLSSLFTHSSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLS 70

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV------- 300
           ++N L+ G   +        L ++M L G S D+ +   ++  LC   R++E        
Sbjct: 71  SFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGI 130

Query: 301 --RDLMEKMVNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
             R     +V  + L      + RI EA  L  +M ++GC PDVVTY  ++ G C  G +
Sbjct: 131 LRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNI 190

Query: 356 DQAKKMLQQM------YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           + A K+ Q+M      Y   CKPN ++Y   ++GLC  G+  EA+++    + +   PN 
Sbjct: 191 NIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPN- 249

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
                                   EM+ +G  P  V  N+LI +LC+EGK+  AKK +  
Sbjct: 250 ------------------------EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGV 285

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            +  G   ++V + SLI GFC  GDL  A  L   M     +PD ++Y  +I+  SK  +
Sbjct: 286 MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLK 345

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVI 589
           VEEA +L  +ML  G  P V+TY +++      G+V+D  KL   M +      +Y   I
Sbjct: 346 VEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGI 405

Query: 590 --ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
             + LC    L EA K+  ++  +  K +    + L++     G    A+++  ++ N  
Sbjct: 406 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEG 465

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             P++     +      EG+ ++A+ L+ +    G
Sbjct: 466 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 500



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 158/313 (50%), Gaps = 13/313 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + + ++++ L K      AK++L +M   GI      ++ L+  +   G L +A  + 
Sbjct: 259 DMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELF 318

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M      P+++  N  I+      K+ +A++    M L G  PNV+TY+ L+KG    
Sbjct: 319 VSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLA 378

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDS 311
            ++ DA KL   M   G + +  +Y   +  LCK   + E   L  ++        + + 
Sbjct: 379 GKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENL 438

Query: 312 NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N   D     G++E A EL  ++S  G  P+VVTYT +++GFCR G++D+A  ++Q+M  
Sbjct: 439 NCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEA 498

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +GC P+ ++Y   + G   + K  E  ++++   ++  +P+AIT S+V+  L ++ K  E
Sbjct: 499 NGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQE 558

Query: 428 ACDVV-REMVKKG 439
              ++ R  ++KG
Sbjct: 559 CLHLLPRFPIQKG 571



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 153/318 (48%), Gaps = 19/318 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  +G++     F+ L+    + GK+  A  +L +M ++ + P+L+  N+ I    +   
Sbjct: 251 MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGD 310

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L  A      M   G  P+V++YN LI GY    ++++A+KL +EM L G  P+ ++Y +
Sbjct: 311 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDS 370

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDS--------NLFHD----QGRIEEAKELVNQMSQMG 334
           ++  +    ++ + + L   M             +F D       + EA +L  ++    
Sbjct: 371 LLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSN 430

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
              ++     +++G C+ G+L+ A ++ +++ + G +PN V+YT  ++G C  G+  +A 
Sbjct: 431 FKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKAN 490

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            +I   E    TP+ ITY+ +M G     KL E   ++  M +K   P  +  ++++  L
Sbjct: 491 VLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML 550

Query: 455 CREGKMDGAKKFMQECLN 472
            ++ K        QECL+
Sbjct: 551 SKDEK-------YQECLH 561


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 212/438 (48%), Gaps = 35/438 (7%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ ++  Y RAG +  A     M+     AP+    N  I  L V   +  AL   + M 
Sbjct: 131 YNTMVNGYCRAGNIDAAR---RMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDML 187

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G +P+V+TY+ L+   C     K A+ L+DEM  KGC PD V+Y  ++  +C      
Sbjct: 188 HRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCS----- 242

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                             QG + EA +++N +   GC PD VTYT V+   C     ++A
Sbjct: 243 ------------------QGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEA 284

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            K+L +M+ + C P+ V++ A +  LC  G    A +++    E   TP+ ITYS +M G
Sbjct: 285 DKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDG 344

Query: 419 LRREGKLSEACDVVRE----MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           L +E ++ EA  +++E    MV K   P  V  N +I SLC++G  D A K + E    G
Sbjct: 345 LCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHG 404

Query: 475 CAVNVVNFTSLIRGF-CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           C  ++  +  ++ GF C+    EEAL LL+ M      PDT TY ++   LS+   +E A
Sbjct: 405 CIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERA 464

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIE 590
             +  ++ + GL P  + Y  ++   C+  R +  +     M+S   C    + Y  ++E
Sbjct: 465 IGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVS-NGCMPDESTYIILVE 523

Query: 591 NLCSFGYLEEAGKILGKV 608
            +   G+LEEA ++LG +
Sbjct: 524 GIAYEGFLEEAKELLGNL 541



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 232/493 (47%), Gaps = 36/493 (7%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G+L  A+ ++  +  +   P ++ CN  I  L    ++A A R +E +   G +  ++TY
Sbjct: 75  GELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL---GPSATIITY 131

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N ++ GYC    I  A ++ID +P    +PD  +Y  ++  LC       VR        
Sbjct: 132 NTMVNGYCRAGNIDAARRMIDSVPF---APDTFTYNPLIRALC-------VR-------- 173

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                   G + +A  + + M   GC P VVTY+ +++  C+     QA  +L +M   G
Sbjct: 174 --------GCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKG 225

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
           C+P+ V+Y   +N +C  G   EA +++N+       P+A+TY+ V+  L    +  EA 
Sbjct: 226 CEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEAD 285

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            ++ +M      P  V  N +I SLC++G +  A K + +    GC  +++ ++S++ G 
Sbjct: 286 KLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGL 345

Query: 490 CQKGDLEEALSLLDDMY--LCKKD--PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           C++  ++EA+ LL ++   +  K+  PD VT+ TII +L + G  + A +++ +M   G 
Sbjct: 346 CKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGC 405

Query: 546 VPTVVTYRTVIHRY-CQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAG 602
           +P + TY  ++  + C+  + E+ L LL  M+S   C   T Y  +   L     +E A 
Sbjct: 406 IPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAI 465

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
            +  +V       D    + ++     K    LA      M +   +PD      + E +
Sbjct: 466 GMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGI 525

Query: 663 ILEGKSEEADTLM 675
             EG  EEA  L+
Sbjct: 526 AYEGFLEEAKELL 538



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 197/418 (47%), Gaps = 33/418 (7%)

Query: 168 ARRGIEC---RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           ARR I+     P+ F+Y  L+ A    G + +A+ V   M     +P+++  +  +    
Sbjct: 147 ARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATC 206

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
             +   +A+  L+ M+  G  P+++TYN LI   C    + +A+K+++ +P  GC PD V
Sbjct: 207 KESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAV 266

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           +Y  V+  LC  +                       R EEA +L+ +M    C PD VT+
Sbjct: 267 TYTPVLKSLCSSE-----------------------RWEEADKLLTKMFSNDCAPDEVTF 303

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA----REMIN 398
            AV+   C+ G + +A K+L QM  HGC P+ ++Y++ ++GLC   +  EA    +E++ 
Sbjct: 304 NAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLA 363

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS-LCRE 457
               +   P+ +T++ ++  L ++G    A  VV EM + G  P     N ++   LC+ 
Sbjct: 364 EMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKS 423

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
            K + A   +   ++ G   +   + SL  G  ++ ++E A+ +   +      PD + Y
Sbjct: 424 CKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLY 483

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
             I+  L K  R + A +    M+S G +P   TY  ++      G +E+  +LL  +
Sbjct: 484 NAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 189/377 (50%), Gaps = 14/377 (3%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            GR+ +A+ +V  +     I   +TY  +VNG+CR G +D A++M+  +      P+T +
Sbjct: 109 DGRVADAERVVEALGPSATI---ITYNTMVNGYCRAGNIDAARRMIDSVPF---APDTFT 162

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   +  LC  G  L+A  + +       +P+ +TYS+++    +E    +A  ++ EM 
Sbjct: 163 YNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMR 222

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            KG  P  V  N+LI ++C +G +  A K +    + GC  + V +T +++  C     E
Sbjct: 223 SKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWE 282

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           EA  LL  M+     PD VT+  +I +L + G V  AT+++ +M   G  P ++TY +++
Sbjct: 283 EADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIM 342

Query: 557 HRYCQVGRVEDLLKLLEKMLSK---QKC---RTAYNQVIENLCSFGYLEEAGKILGKVLR 610
              C+  RV++ +KLL+++L++   + C   +  +N +I +LC  G  + A K++ ++  
Sbjct: 343 DGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSE 402

Query: 611 TASKADASTCHVLVESYLNKGIPL-LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
                D +T + +V+ +L K      A  +   M +  L PD    K ++  L  E + E
Sbjct: 403 HGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEME 462

Query: 670 EADTLMLRFVERGHIQP 686
            A   M R V+   + P
Sbjct: 463 RA-IGMFRRVQAMGLSP 478



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 184/388 (47%), Gaps = 21/388 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           +  D   Y  ++  L        A  V   M  RG  C P   +Y  L+ A  +    + 
Sbjct: 156 FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRG--CSPSVVTYSILLDATCKESGYKQ 213

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +L  M+     P+++  N  I+ +     + +AL+ L  +   G  P+ +TY  ++K
Sbjct: 214 AVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLK 273

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------- 307
             C   R ++A KL+ +M    C+PD+V++  V+  LC++  +     ++ +M       
Sbjct: 274 SLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTP 333

Query: 308 --VNDSNLFHD---QGRIEEA----KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
             +  S++      + R++EA    KEL+ +M    CIPD VT+  ++   C+ G  D+A
Sbjct: 334 DIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRA 393

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNG-LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
            K++ +M  HGC P+  +Y   ++G LC + K+ EA +++N        P+  TY  +  
Sbjct: 394 IKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAF 453

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           GL RE ++  A  + R +   G  P  +  N ++  LC++ + D A  F    ++ GC  
Sbjct: 454 GLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMP 513

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDM 505
           +   +  L+ G   +G LEEA  LL ++
Sbjct: 514 DESTYIILVEGIAYEGFLEEAKELLGNL 541



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 136/295 (46%), Gaps = 39/295 (13%)

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + GL + G+L  A  +V  +   G  P  +  N+LI+ LC +G++  A++ ++     G 
Sbjct: 68  LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEA---LGP 124

Query: 476 AVNVVNFTSLIRGFCQKGDLE--------------------------------EALSLLD 503
           +  ++ + +++ G+C+ G+++                                +AL++ D
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFD 184

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           DM      P  VTY+ ++DA  K    ++A  L+ +M SKG  P +VTY  +I+  C  G
Sbjct: 185 DMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQG 244

Query: 564 RVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
            V + LK+L  + S   C+     Y  V+++LCS    EEA K+L K+       D  T 
Sbjct: 245 DVGEALKVLNSLPS-YGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTF 303

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           + ++ S   KG    A KV  +M      PD+     + + L  E + +EA  L+
Sbjct: 304 NAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 17/209 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIE--CRPE--AFSYLMVAYSRAGKLRNA 195
           D I Y  +++ L K +    A ++L+ +    +   C P+   F+ ++ +  + G    A
Sbjct: 334 DIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRA 393

Query: 196 MYVLSMMQKAAVAPNLLICNTAIH-VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           + V+  M +    P++   N  +   L    K  +AL  L  M   G+ P+  TY  L  
Sbjct: 394 IKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAF 453

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G      ++ AI +   +   G SPDK+ Y  ++  LCK+ R     D    MV++  + 
Sbjct: 454 GLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMP 513

Query: 315 HD------------QGRIEEAKELVNQMS 331
            +            +G +EEAKEL+  +S
Sbjct: 514 DESTYIILVEGIAYEGFLEEAKELLGNLS 542


>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 544

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 242/511 (47%), Gaps = 36/511 (7%)

Query: 64  RRVVLEEDEFRHPLVREVCRLIELRSAWSPK--------LEGELRNLLRSLKPRQICAVL 115
           R  +L   + RH        L+   S  SP         +   ++   + L P+++ +++
Sbjct: 9   RTTMLCSTQSRHRPKTTAVALLHSNSTGSPNNPLPESYTVTPPIKPWPQRLYPKRLVSMI 68

Query: 116 RSQADERVALQFFYWADR-QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIEC 174
             Q +  +ALQ F +A + Q  + H+   Y  ++  LS+ ++    + +L  + +  I+C
Sbjct: 69  TRQQNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKC 128

Query: 175 RPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK--LAKALR 232
               F  ++  Y  AGK   A+     +Q   V  ++   NT ++  V   +  L  A+ 
Sbjct: 129 GENIFINVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAM- 187

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
           F       G+ PNV T N LIK  C  + ++ A+K++DEMP  G  P+ V+Y T++G   
Sbjct: 188 FKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGG-- 245

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
                                +  +G +  A ++  ++   G +PD  TYT ++NG+C  
Sbjct: 246 ---------------------YSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQ 284

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
           G L  A K++  M  +G +PN V+Y   +   C   K+ EAR +++   E  + P++   
Sbjct: 285 GRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALC 344

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
             V+  L   GK+ EAC++ + M+KK   P    ++ LI  LC+EGK+  A+K   E   
Sbjct: 345 CKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGE-FE 403

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +G   +++ + +LI G C+KG+L EA  L DDM      P+  TY  +I   SK G  +E
Sbjct: 404 RGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKE 463

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
              ++ +ML    +P   TY  +I   C++G
Sbjct: 464 GIRILEEMLDNRCMPNKSTYAILIEELCKMG 494



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 154/307 (50%), Gaps = 3/307 (0%)

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           N  S+ G +P+V T   ++   C+  +++ A K+L +M   G  PN V+YT  L G    
Sbjct: 190 NCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSR 249

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G  + A ++     +  W P+A TY+++M+G   +G+L++A  ++ +M + G  P  V  
Sbjct: 250 GDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTY 309

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            +++++ C+E K   A+  + + L +    +      +I   C+ G +EEA  L   M  
Sbjct: 310 GVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLK 369

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD    +T+I  L K G+V EA +L  +   +G +P+++TY T+I   C+ G + +
Sbjct: 370 KNCMPDNAIMSTLIHWLCKEGKVWEARKLFGE-FERGAIPSLLTYNTLIAGMCEKGELSE 428

Query: 568 LLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
             KL + M+ K     A  YN +I+     G  +E  +IL ++L      + ST  +L+E
Sbjct: 429 AGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIE 488

Query: 626 SYLNKGI 632
                G+
Sbjct: 489 ELCKMGM 495



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 157/364 (43%), Gaps = 8/364 (2%)

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQ-MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           V +   ++N F +    D    M +     +G  PN  +    +  LC       A +++
Sbjct: 165 VRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVL 224

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +        PN +TY+ ++ G    G +  A  V  E+  +G+ P      +L+   C +
Sbjct: 225 DEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQ 284

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G++  A K M +    G   N V +  ++  +C++    EA +LLDDM   +  P +   
Sbjct: 285 GRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALC 344

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL-EKML 576
             +ID L + G++EEA EL  +ML K  +P      T+IH  C+ G+V +  KL  E   
Sbjct: 345 CKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFER 404

Query: 577 SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
                   YN +I  +C  G L EAGK+   ++    K +A T ++L++ +   G     
Sbjct: 405 GAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEG 464

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQR 696
            ++   M +   +P+      + E L   G   E D ++   +  G +   S +      
Sbjct: 465 IRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMAMASGGVDSDSWD------ 518

Query: 697 VFLN 700
           +FLN
Sbjct: 519 LFLN 522



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 25/246 (10%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y +M+E   K K    A+ +L  M  R           ++     AGK+  A  +   
Sbjct: 307 VTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKR 366

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M K    P+  I +T IH L    K+ +A +     +   I P++LTYN LI G C+   
Sbjct: 367 MLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAI-PSLLTYNTLIAGMCEKGE 425

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A KL D+M  KG  P+  +Y  ++    K    KE   ++E+M+++           
Sbjct: 426 LSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNR---------- 475

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
                        C+P+  TY  ++   C++G   +  K++      G   ++ S+  FL
Sbjct: 476 -------------CMPNKSTYAILIEELCKMGMEGEVDKVVSMAMASG-GVDSDSWDLFL 521

Query: 382 NGLCHN 387
           N    N
Sbjct: 522 NKAVGN 527


>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Glycine max]
          Length = 589

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 225/445 (50%), Gaps = 25/445 (5%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GKL  A  ++ +M + +  P+   C   I   +    + +A + L +M ++G  P+ +TY
Sbjct: 144 GKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTLNKMVMSGGVPDTITY 203

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N +I G C   R++ A+ L+++M L GCSPD ++Y +++  L                  
Sbjct: 204 NMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCL------------------ 245

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                 D+G   +A        + GC P ++TYT ++   C+     +A ++L+ M   G
Sbjct: 246 -----FDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEG 300

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
           C P+ V+Y + +N     GK  +   +I         PNA+TY+ ++H L   G   E  
Sbjct: 301 CYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVD 360

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           D+++ M +    PT V  N+L+  LC+ G +D A  F    + + C+ +++ + +L+ G 
Sbjct: 361 DILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGL 420

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C++G ++E + LL+ +      P  VTY  +ID L++ G +E A EL  +M+ KG++P  
Sbjct: 421 CKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDE 480

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK--CRTAYNQVIENLCSFGYLEEAGKILGK 607
           +T+ ++   +C+  ++E+  +LL++M  K++    TAY  VI  LC    ++ A ++L  
Sbjct: 481 ITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDL 540

Query: 608 VLRTASKADASTCHVLVESYLNKGI 632
           +++     D      L+++  + G+
Sbjct: 541 MVKGQCNPDERIYSALIKAVADGGM 565



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 220/469 (46%), Gaps = 18/469 (3%)

Query: 88  RSAWSPKLEGELRNLLRS-LKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYM 146
           +S  SP L  E   +    +   +I   L S+    VA +      R+ +  H P    +
Sbjct: 112 KSVNSPTLSPEAPFVQNDEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNL 171

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQK 204
           +   + K  + +  K + +++   G+   P+  +Y MV     + G+LR+A+ ++  M  
Sbjct: 172 IRGFIRKGLVDEACKTLNKMVMSGGV---PDTITYNMVIGGLCKNGRLRSALDLVEDMSL 228

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
           +  +P+ +  N+ I  L       +A+ F       G  P ++TY  LI+  C       
Sbjct: 229 SGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAAR 288

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSNLFH 315
           A++++++M ++GC PD V+Y +++    K+ + ++            +    V  + L H
Sbjct: 289 ALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIH 348

Query: 316 ---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
              + G  +E  +++  M++    P  VTY  ++NG C+ G LD+A      M    C P
Sbjct: 349 SLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSP 408

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           + ++Y   L+GLC  G   E  +++N       +P  +TY++V+ GL R G +  A ++ 
Sbjct: 409 DIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELY 468

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            EMV KG  P  +  + L    CR  +++ A + ++E   K   +    +  +I G C++
Sbjct: 469 DEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQ 528

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
             ++ A+ +LD M   + +PD   Y+ +I A++  G ++EA +L   ++
Sbjct: 529 KKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLHQTLI 577



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 196/429 (45%), Gaps = 12/429 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R++ +MAR+       + + L+  + R G +  A   L+ M  +   P+ +  N  I 
Sbjct: 149 AARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTLNKMVMSGGVPDTITYNMVIG 208

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    +L  AL  +E M L+G +P+ +TYN +I+   D      A+    +   KGC P
Sbjct: 209 GLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPP 268

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
             ++Y  ++  +CK        +++E M  +             NL   QG+ E+   ++
Sbjct: 269 YLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVI 328

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
             +   G  P+ VTY  +++     G  D+   +L+ M      P  V+Y   LNGLC +
Sbjct: 329 LNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKS 388

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G    A    +T   E  +P+ ITY+ ++ GL +EG + E   ++  +V     P  V  
Sbjct: 389 GLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTY 448

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N++I  L R G M+ AK+   E ++KG   + +  +SL  GFC+   LEEA  LL +M +
Sbjct: 449 NIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSM 508

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
            ++      Y  +I  L +  +V+ A +++  M+     P    Y  +I      G +++
Sbjct: 509 KEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKE 568

Query: 568 LLKLLEKML 576
              L + ++
Sbjct: 569 ANDLHQTLI 577



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 168/362 (46%), Gaps = 15/362 (4%)

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D +T   ++   C  G+L  A +++  M      P+  S T  + G    G   EA + +
Sbjct: 129 DEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTL 188

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           N        P+ ITY++V+ GL + G+L  A D+V +M   G  P  +  N +I+ L  +
Sbjct: 189 NKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDK 248

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G  + A  F ++ L KGC   ++ +T LI   C+      AL +L+DM +    PD VTY
Sbjct: 249 GNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTY 308

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG---RVEDLLKLLEK 574
            ++++  SK G+ E+   +++ +LS G+ P  VTY T+IH     G    V+D+LK++ +
Sbjct: 309 NSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNE 368

Query: 575 MLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV-----ESYLN 629
             S       YN ++  LC  G L+ A      ++      D  T + L+     E +++
Sbjct: 369 T-SSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFID 427

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
           +GI LL   V       +  P L     V + L   G  E A  L    V++G I P   
Sbjct: 428 EGIQLLNLLVG-----TSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKG-IIPDEI 481

Query: 690 EH 691
            H
Sbjct: 482 TH 483



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 160/337 (47%), Gaps = 21/337 (6%)

Query: 129 YWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIE-CRPEAFSY--LM 183
           +W D Q R    P  I Y +++E++ K   C GA R L ++    +E C P+  +Y  L+
Sbjct: 257 FWRD-QLRKGCPPYLITYTVLIELVCK--YC-GAARALEVLEDMAMEGCYPDIVTYNSLV 312

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
              S+ GK  +   V+  +    + PN +  NT IH L+      +    L+ M      
Sbjct: 313 NLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSP 372

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P  +TYN L+ G C    +  AI     M  + CSPD ++Y T++  LCKE  I E   L
Sbjct: 373 PTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQL 432

Query: 304 MEKMVNDS--------NLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           +  +V  S        N+  D     G +E AKEL ++M   G IPD +T++++  GFCR
Sbjct: 433 LNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCR 492

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
             +L++A ++L++M     +    +Y   + GLC   K   A ++++   +    P+   
Sbjct: 493 ADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERI 552

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           YS ++  +   G L EA D+ + ++K       + +N
Sbjct: 553 YSALIKAVADGGMLKEANDLHQTLIKWKILKKEIMLN 589


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 214/418 (51%), Gaps = 13/418 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  ++    K +  Q A R+L  M +RGI      ++ ++      G++ +A+   
Sbjct: 32  DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 91

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             MQ+   AP+++     +  L    +++ A   LE M  AG  PNV+TYN LI G+C L
Sbjct: 92  RDMQRHC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 150

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN--------DS 311
             + +A+ L ++M    CSPD  +Y  ++   CK++R ++   L+++MV           
Sbjct: 151 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 210

Query: 312 NLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N   D     G+  +A  L   M +  C P   T+  +++ FC+VG+LD A ++ Q M  
Sbjct: 211 NTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTD 270

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+  +Y   ++G C   +  +AR+++    E    P+ +TY+ ++ GL +  ++ E
Sbjct: 271 RGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDE 330

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A +V   +   G+F   V  + LI  LC+  ++D A+K ++E    G A +VV +T LI 
Sbjct: 331 AYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIH 390

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           GFC+   L+++L+   +M      P  +TY+ +ID L K+ RV +   L+  ML +G+
Sbjct: 391 GFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 208/446 (46%), Gaps = 52/446 (11%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+ A+ R  K + A  +         +P+ +  +T I+         +A R L+ M+  G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I P+   YN +IKG CD  R+  A+    +M  + C+P  ++Y  ++  LCK  RI +  
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISDAS 122

Query: 302 DLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            ++E M+               N F   G ++EA  L NQM +  C PDV TY  +++G+
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+        K+LQ+M  +GC+PN ++Y   ++ L  +GK ++A  +          P+ 
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 242

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            T+++++    + G+L  A ++ + M  +G  P     N++I   CR  ++D A++ ++ 
Sbjct: 243 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 302

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEAL-------------------SLLDDMYLCKK 510
               GC  +VV + S++ G C+   ++EA                    +L+D   LCK 
Sbjct: 303 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG--LCKS 360

Query: 511 ------------------DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
                              PD V YT +I    K  +++++     +ML KG VPTV+TY
Sbjct: 361 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 420

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSK 578
             VI + C+  RV D   LL+ ML +
Sbjct: 421 SIVIDKLCKSARVRDGCMLLKTMLER 446



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 213/480 (44%), Gaps = 44/480 (9%)

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           CN  +   V   K  +A    +       +P+ +TY+ LI G+C     + A +L+DEM 
Sbjct: 1   CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQM 333
            +G  P    Y T++  LC                       D GR++ A      M Q 
Sbjct: 61  KRGIVPHNAVYNTIIKGLC-----------------------DNGRVDSALVHYRDM-QR 96

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
            C P V+TYT +V+  C+   +  A  +L+ M   GC PN V+Y   +NG C  G   EA
Sbjct: 97  HCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEA 156

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
             + N   E   +P+  TY++++ G  ++ +  +   +++EMVK G  P  +  N L+ S
Sbjct: 157 VVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDS 216

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           L + GK   A    Q  L + C  +   F  +I  FC+ G L+ A  L   M      PD
Sbjct: 217 LVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPD 276

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
             TY  +I    +  R+++A +L+ +M   G  P VVTY +++   C+  +V++  ++ E
Sbjct: 277 IYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYE 336

Query: 574 KM------LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            +      L    C T    +I+ LC    L++A K+L ++ R  S  D     +L+  +
Sbjct: 337 VLRNGGYFLDVVTCST----LIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGF 392

Query: 628 -----LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                L+K +   +      M ++  +P +     V ++L    +  +   L+   +ERG
Sbjct: 393 CKADQLDKSLAFFS-----EMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447


>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 143/560 (25%), Positives = 260/560 (46%), Gaps = 27/560 (4%)

Query: 76  PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRS---QADERVALQFFYWAD 132
           P V ++  L++  S     L+   R     L P  +  VL+S   +    VA++FF+WA 
Sbjct: 80  PWVAQILNLLDGSSNMEHNLDSFCRKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAG 139

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +Q +Y H    +  ++E+L+ +      + V   +  RG+     A + L+ ++   G +
Sbjct: 140 KQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLV 199

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
              ++V   M++  + P+L   N  ++ LV    +  A +  E M    I P+ +TYN +
Sbjct: 200 EELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIM 259

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           IKGYC   +++ A++   +M +K   PDK++Y T++     E      RD       D+ 
Sbjct: 260 IKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSE------RDF------DTC 307

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
           L            L  +M + G      +Y+ V+ G C+  +  +A  + + M   GC+ 
Sbjct: 308 L-----------SLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRA 356

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N   YTA ++    NG   EA  +    + E + P+A+TYSV+++GL + G+L +  ++ 
Sbjct: 357 NVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELF 416

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
                KG     +    LI  L + G+++ A+   +E   KGCA +   + ++I    + 
Sbjct: 417 DFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKH 476

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G +++AL+L   M     D    T+T +ID L K  + EEA +   KM+ KG+ PTV ++
Sbjct: 477 GKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASF 536

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKC-RTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           R +    C  G+V    K+L+ +        TA+  +I  LC    ++EA K+   ++  
Sbjct: 537 RALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQRIKEACKLADGIVDR 596

Query: 612 ASKADASTCHVLVESYLNKG 631
             +       VL+ +    G
Sbjct: 597 GREIPGRIRTVLINALRKAG 616



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 177/381 (46%), Gaps = 2/381 (0%)

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           F + G +EE   +  +M + G  P + TY  +VNG      ++ A+K+ + M      P+
Sbjct: 193 FGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPD 252

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
           TV+Y   + G C  GK  +A E     E +   P+ ITY  ++     E        +  
Sbjct: 253 TVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYL 312

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM ++G    P   +L+I  LC++ K   A    +    KGC  NV  +T+LI  + + G
Sbjct: 313 EMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNG 372

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            +EEA+ L + M     +PD VTY+ +++ L K+GR+++  EL     +KG+    + Y 
Sbjct: 373 SMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYA 432

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRT 611
           ++I    + GR+ED   L E+M  K   R +  YN +I+ L   G +++A  + G++   
Sbjct: 433 SLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEE 492

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
                  T  +L++    +     A K   +M ++ + P +   + ++  L L GK   A
Sbjct: 493 GCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARA 552

Query: 672 DTLMLRFVERGHIQPKSEEHL 692
             ++      G I   + E +
Sbjct: 553 CKILDDLAPMGIIPETAFEDM 573


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 260/554 (46%), Gaps = 55/554 (9%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV---VGNKLAKALRFLE 235
           F   + AY   GK   A+ +   M +  + PNLL CNT +  LV       ++ A    +
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKE 294
            M   G++ NV T+N L+ GYC   +++DA+ +++ M  +   +PD V+Y T++  + K+
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253

Query: 295 KRIKEVRDLMEKM---------VNDSNLFHDQ---GRIEEAKELVNQMSQMGCIPDVVTY 342
            R+ ++++L+  M         V  +NL +     G ++EA ++V  M Q   +PD+ TY
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTY 313

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             ++NG C  G + +  +++  M     +P+ V+Y   ++G    G SLEAR+++   E 
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373

Query: 403 E--------------W----------------------WTPNAITYSVVMHGLRREGKLS 426
           +              W                      ++P+ +TY  ++    + G LS
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLS 433

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
            A +++REM +KG     + +N ++ +LC+E K+D A   +     +G  V+ V + +LI
Sbjct: 434 GALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI 493

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            GF ++  +E+AL + D+M   K  P   T+ ++I  L  +G+ E A E   ++   GL+
Sbjct: 494 MGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLL 553

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKI 604
           P   T+ ++I  YC+ GRVE   +   + +        Y  N ++  LC  G  E+A   
Sbjct: 554 PDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNF 613

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
              ++    + D  T + ++ ++        AY +   M  + L PD          L+ 
Sbjct: 614 FNTLIE-EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLME 672

Query: 665 EGKSEEADTLMLRF 678
           +GK  E D L+ +F
Sbjct: 673 DGKLSETDELLKKF 686



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 247/529 (46%), Gaps = 81/529 (15%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           +++   D + Y  +L+ +SK       K +L  M + G+      ++ L+  Y + G L+
Sbjct: 233 EFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLK 292

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  ++ +M++  V P+L   N  I+ L     + + L  ++ M+   + P+V+TYN LI
Sbjct: 293 EAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            G  +L    +A KL+++M   G   ++V++   + +LCKE++ + V             
Sbjct: 353 DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV------------- 399

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                   + KELV+     G  PD+VTY  ++  + +VG+L  A +M+++M   G K N
Sbjct: 400 ------TRKVKELVDMH---GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
           T++    L+ LC   K  EA  ++N++ +  +  + +TY  ++ G  RE K+ +A ++  
Sbjct: 451 TITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWD 510

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM K    PT    N LI  LC  GK + A +   E    G   +   F S+I G+C++G
Sbjct: 511 EMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEG 570

Query: 494 DLEEAL---------SLLDDMYLC-------------------------KKDPDTVTYTT 519
            +E+A          S   D Y C                         +++ DTVTY T
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNT 630

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--- 576
           +I A  K+ +++EA +L+ +M  KGL P   TY + I    + G++ +  +LL+K     
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKF 690

Query: 577 -------------------SKQKCRT---AYNQVIENLCSFGYLEEAGK 603
                              SK++  T   AY+ VI+ LCS G L+E  +
Sbjct: 691 GSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSR 739



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 41/291 (14%)

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L    H    P+   +   L+   H GK   A ++          PN +T + ++ GL 
Sbjct: 118 LLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV 177

Query: 421 R---EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           R      +S A +V  +MVK G        N+L+   C EGK                  
Sbjct: 178 RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK------------------ 219

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYL-CKKDPDTVTYTTIIDALSKNGRVEEATEL 536
                            LE+AL +L+ M    K +PD VTY TI+ A+SK GR+ +  EL
Sbjct: 220 -----------------LEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKEL 262

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCS 594
           ++ M   GLVP  VTY  +++ YC++G +++  +++E M           YN +I  LC+
Sbjct: 263 LLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCN 322

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
            G + E  +++  +     + D  T + L++     G+ L A K+  +M N
Sbjct: 323 AGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373


>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 143/560 (25%), Positives = 260/560 (46%), Gaps = 27/560 (4%)

Query: 76  PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRS---QADERVALQFFYWAD 132
           P V ++  L++  S     L+   R     L P  +  VL+S   +    VA++FF+WA 
Sbjct: 82  PWVAQILNLLDGSSNMEHNLDSFCRKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAG 141

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +Q +Y H    +  ++E+L+ +      + V   +  RG+     A + L+ ++   G +
Sbjct: 142 KQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLV 201

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
              ++V   M++  + P+L   N  ++ LV    +  A +  E M    I P+ +TYN +
Sbjct: 202 EELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIM 261

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           IKGYC   +++ A++   +M +K   PDK++Y T++     E      RD       D+ 
Sbjct: 262 IKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSE------RDF------DTC 309

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
           L            L  +M + G      +Y+ V+ G C+  +  +A  + + M   GC+ 
Sbjct: 310 L-----------SLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRA 358

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N   YTA ++    NG   EA  +    + E + P+A+TYSV+++GL + G+L +  ++ 
Sbjct: 359 NVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELF 418

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
                KG     +    LI  L + G+++ A+   +E   KGCA +   + ++I    + 
Sbjct: 419 DFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKH 478

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G +++AL+L   M     D    T+T +ID L K  + EEA +   KM+ KG+ PTV ++
Sbjct: 479 GKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASF 538

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKC-RTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           R +    C  G+V    K+L+ +        TA+  +I  LC    ++EA K+   ++  
Sbjct: 539 RALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQRIKEACKLADGIVDR 598

Query: 612 ASKADASTCHVLVESYLNKG 631
             +       VL+ +    G
Sbjct: 599 GREIPGRIRTVLINALRKAG 618



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 177/381 (46%), Gaps = 2/381 (0%)

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           F + G +EE   +  +M + G  P + TY  +VNG      ++ A+K+ + M      P+
Sbjct: 195 FGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPD 254

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
           TV+Y   + G C  GK  +A E     E +   P+ ITY  ++     E        +  
Sbjct: 255 TVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYL 314

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM ++G    P   +L+I  LC++ K   A    +    KGC  NV  +T+LI  + + G
Sbjct: 315 EMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNG 374

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            +EEA+ L + M     +PD VTY+ +++ L K+GR+++  EL     +KG+    + Y 
Sbjct: 375 SMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYA 434

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRT 611
           ++I    + GR+ED   L E+M  K   R +  YN +I+ L   G +++A  + G++   
Sbjct: 435 SLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEE 494

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
                  T  +L++    +     A K   +M ++ + P +   + ++  L L GK   A
Sbjct: 495 GCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARA 554

Query: 672 DTLMLRFVERGHIQPKSEEHL 692
             ++      G I   + E +
Sbjct: 555 CKILDDLAPMGIIPETAFEDM 575


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 229/448 (51%), Gaps = 13/448 (2%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G  P+ +T   L+KG    + I DA++L DEM  KG   D  +Y  ++  LCK ++    
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 301 RDLMEKMVND--SNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
             L EKM  +   ++F            G   EA ++ ++M   G +PDVV Y+++++G 
Sbjct: 132 IKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 191

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           CR G L +A +  ++M   G   +  +Y + ++GL   G   E    +N   +  ++P+A
Sbjct: 192 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 251

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            T+++++ GL +EGK+ EA  ++  M  KG  P  +  N L+  LC  G+++ A K  + 
Sbjct: 252 FTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 311

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
             ++G  +NV ++  LI G+C+   ++EA  L ++M      P TVTY T+I AL ++GR
Sbjct: 312 LADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGR 371

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE--KMLSKQKCRTAYNQ 587
           V  A +L ++M + G    + TY  ++   C+ G +E+ + L +  K    +     ++ 
Sbjct: 372 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSI 431

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +++ +C  G LEEA K   ++ +   + D    ++L+    NKG+   A K+  +M  + 
Sbjct: 432 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 491

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLM 675
            +PD      + + L+ E +  EA  L+
Sbjct: 492 CLPDSITFNVIIQNLLKENEIHEAIQLL 519



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 205/424 (48%), Gaps = 27/424 (6%)

Query: 156 LCQGAKR--VLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNL 211
           LC+  K    ++L  +    C+ + F+Y M+  S  + G    A+ + S M  A + P++
Sbjct: 122 LCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDV 181

Query: 212 LICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
           ++ ++ +  L    +L +AL F + M+  GI+ +V TYN LI G       K+    ++ 
Sbjct: 182 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL 241

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMS 331
           M  +G SPD  ++  ++  LCKE                       G++ EA++++  M 
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKE-----------------------GKVGEAQQILELMH 278

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
             G  PD++TY  ++NG C VG+L+ A K+ + +   G K N  SY   +NG C + K  
Sbjct: 279 HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID 338

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           EA  +      +   P+ +TY+ ++  L + G++  A  +  EM   G F       +L+
Sbjct: 339 EAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLL 398

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LC+ G ++ A    Q         N+  F+ L+ G C+ G LEEA    D++     +
Sbjct: 399 DGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 458

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PDT+ Y  +I+ L   G + EA +L+ +M  KG +P  +T+  +I    +   + + ++L
Sbjct: 459 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 518

Query: 572 LEKM 575
           LE+M
Sbjct: 519 LEEM 522



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 198/429 (46%), Gaps = 14/429 (3%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D   Y M+++ L K  +   A  +   M   GI      +S LM    R G+L+ A+ 
Sbjct: 143 KGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE 202

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
               M+   ++ ++   N+ IH L       +   FL  M   G +P+  T+  LI G C
Sbjct: 203 FFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLC 262

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLF 314
              ++ +A ++++ M  KG  PD ++Y T+M  LC   ++++   L E + +     N+F
Sbjct: 263 KEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF 322

Query: 315 H----------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                      DQ +I+EA  L  +M   G  P  VTY  ++   C+ G +  A+K+  +
Sbjct: 323 SYNILINGYCKDQ-KIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 381

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G      +Y   L+GLC NG   EA ++  + ++    PN   +S+++ G+ R GK
Sbjct: 382 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 441

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L EA     E+ K G  P  +  N+LI  LC +G +  A K + +   KGC  + + F  
Sbjct: 442 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 501

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +I+   ++ ++ EA+ LL++M      PD    + ++   S + +   A   +   L KG
Sbjct: 502 IIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 561

Query: 545 LVPTVVTYR 553
           +    V  R
Sbjct: 562 VGSVPVKRR 570


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 224/460 (48%), Gaps = 17/460 (3%)

Query: 166 LMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           L   +G    P+  +Y  L+ A+ R G L  A  +L+ M+K  +AP     NT +     
Sbjct: 233 LSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYAR 292

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP-LKGCSPDKV 282
              + +A   +E M   G  P++ TYN L  G C   ++ +A KL DEM  L   SPD V
Sbjct: 293 LGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVV 352

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFHD--------QGRIEEAKELVNQM 330
           +Y T++    K +R  +  +L+E+M    V  S + H+        +G++EEA   +  M
Sbjct: 353 TYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMM 412

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
           ++ G  PDV+TY  +++ +C+   + +A  ++ +M   G K +T +    L  LC   + 
Sbjct: 413 TEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRY 472

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA E++ +  +  + P+ ++Y  VM    +E K   A  +  EM K+   P+    N L
Sbjct: 473 EEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTL 532

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I+ LC  GK+  A   + E + KG   +   +  +I  +C++GDLE+A    + M     
Sbjct: 533 IKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYF 592

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            PD VT  T+++ L  +G++E+A +L      KG    V+TY T+I   C+ G V+  L 
Sbjct: 593 KPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALH 652

Query: 571 LLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
               M ++  Q     YN V+  L   G  EEA  +L K+
Sbjct: 653 FFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKL 692



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 237/510 (46%), Gaps = 26/510 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+  +   G L +A+  LS MQ   ++P+++  NT +        L +A   L RM+
Sbjct: 213 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMK 272

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             GI P   TYN L+  Y  L  IK A  +++ M   G  PD  +Y  +   LC+     
Sbjct: 273 KEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ----- 327

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQ 357
                              G+++EA +L ++M  +  + PDVVTY  +V+   +      
Sbjct: 328 ------------------AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSD 369

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  +L++M   G K + V++   + GLC  G+  EA   +    EE   P+ ITY+ ++ 
Sbjct: 370 ALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLID 429

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
              +   +++A  ++ EMV+ G       +N L+ +LC+E + + A++ ++    +G   
Sbjct: 430 AYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVP 489

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           + V++ +++  + ++   E AL L D+M   K  P   TY T+I  L   G++ EA + +
Sbjct: 490 DEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKL 549

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSF 595
            +++ KGLVP   TY  +IH YC+ G +E   +   KML    +      N ++  LC  
Sbjct: 550 NELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLH 609

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
           G LE+A K+         K D  T + L+++    G    A      M  R L PD    
Sbjct: 610 GKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTY 669

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHIQ 685
             V   L   G+SEEA  ++ +  E G + 
Sbjct: 670 NVVLSALSEAGRSEEAQNMLHKLDESGKLS 699



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 250/504 (49%), Gaps = 16/504 (3%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  ++   ++    + A  V+  M   G E     ++ L     +AGK+  A  +   M
Sbjct: 282 TYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM 341

Query: 203 QK-AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           +  + V+P+++  NT +       + + AL  LE M+  G+  +++T+N ++KG C   +
Sbjct: 342 EHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQ 401

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SN 312
           +++A+  +  M  +G +PD ++Y T++   CK + + +   LM++MV           + 
Sbjct: 402 LEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNT 461

Query: 313 LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L ++   + R EEA+EL+    Q G +PD V+Y  V+  + +  + + A  +  +M    
Sbjct: 462 LLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRK 521

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             P+  +Y   + GLC  GK  EA + +N   ++   P+  TY++++H   +EG L +A 
Sbjct: 522 LTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAF 581

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
               +M++  F P  V  N L+  LC  GK++ A K  +    KG  V+V+ + +LI+  
Sbjct: 582 QFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQAL 641

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ GD++ AL    DM      PD  TY  ++ ALS+ GR EEA  ++ K+   G +   
Sbjct: 642 CKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSER 701

Query: 550 VTYRTVIHRYCQV--GRVEDLLKLLEKML-SKQKCRTAYNQVIENLCSFGYLEEAGKILG 606
            +Y  +     +V  G+  ++    E    +K   + +YN+ ++ LC  G L+EA  +L 
Sbjct: 702 FSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLD 761

Query: 607 KVLRTASKADASTCHVLVESYLNK 630
           ++++     D+ST   L+E  + +
Sbjct: 762 EMMQKGMSVDSSTYITLMEGLIKR 785



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 177/420 (42%), Gaps = 75/420 (17%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P+  T+  +V+  C  G L  A   L  M   G  P+ V+Y   L   C  G   EAR +
Sbjct: 208 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTL 267

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +   ++E   P   TY+ ++    R G + +A +VV  M   GF P     N+L   LC+
Sbjct: 268 LARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ 327

Query: 457 EGKMDGAKK------------------------------------FMQECLNKGCAVNVV 480
            GK+D A K                                     ++E  +KG   ++V
Sbjct: 328 AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLV 387

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA----------------- 523
               +++G C++G LEEAL  L  M      PD +TY T+IDA                 
Sbjct: 388 THNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEM 447

Query: 524 ------------------LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                             L K  R EEA EL+     +G VP  V+Y TV+  Y +  + 
Sbjct: 448 VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKP 507

Query: 566 EDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           E  L L ++M SK+K   +   YN +I+ LC+ G L EA   L ++++     D +T ++
Sbjct: 508 EPALYLWDEM-SKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNI 566

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++ +Y  +G    A++   +M      PD+  C  +   L L GK E+A  L   + E+G
Sbjct: 567 IIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKG 626



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 144/351 (41%), Gaps = 52/351 (14%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  +++   K +    A  ++  M R G++      + L+    +  +   A  +L
Sbjct: 420 DVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELL 479

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
               +    P+ +   T +      NK   AL   + M    +TP++ TYN LIKG C +
Sbjct: 480 RSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTI 539

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD--- 316
            ++ +AI  ++E+  KG  PD  +Y  ++   CKE  +++      KM+   N F     
Sbjct: 540 GKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLE--NYFKPDVV 597

Query: 317 -----------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                       G++E+A +L    ++ G   DV+TY  ++   C+ G++D A      M
Sbjct: 598 TCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADM 657

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV---------- 415
              G +P+  +Y   L+ L   G+S EA+ M++  +E        +Y ++          
Sbjct: 658 EARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTG 717

Query: 416 --------------MHGLRRE------------GKLSEACDVVREMVKKGF 440
                           G  +E            G+L EA  V+ EM++KG 
Sbjct: 718 KDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGM 768



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 129/318 (40%), Gaps = 40/318 (12%)

Query: 407 PNAITYSVVMHGLRREGKLSE--ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
           P+    + V+  L R    S   + DV R ++     P     NLL+ + C +G +  A 
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 230

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             +      G + +VV + +L++  C+KG L EA +LL  M      P   TY T++ A 
Sbjct: 231 STLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAY 290

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE------------------ 566
           ++ G +++AT ++  M + G  P + TY  +    CQ G+V+                  
Sbjct: 291 ARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPD 350

Query: 567 ------------------DLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
                             D L LLE+M  K  +     +N V++ LC  G LEEA   L 
Sbjct: 351 VVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLK 410

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
            +       D  T + L+++Y        A+ +   M    L  D      +   L  E 
Sbjct: 411 MMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEK 470

Query: 667 KSEEADTLMLRFVERGHI 684
           + EEA+ L+    +RG +
Sbjct: 471 RYEEAEELLRSPPQRGFV 488



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 17/273 (6%)

Query: 128 FYWADRQWRYRHDPIVYY---MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV 184
            Y  D   + +  P +Y    ++  + +  KL +   ++  LM ++G+      ++ ++ 
Sbjct: 511 LYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELM-KKGLVPDDTTYNIIIH 569

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
           AY + G L  A    + M +    P+++ CNT ++ L +  KL KA++  E     G   
Sbjct: 570 AYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKV 629

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           +V+TYN LI+  C    +  A+    +M  +G  PD  +Y  V+  L +  R +E ++++
Sbjct: 630 DVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNML 689

Query: 305 EKMVNDSNLFHD------QGRIEEAKELVNQMSQMGCIP-------DVVTYTAVVNGFCR 351
            K+     L         +   EE K   +   +  C         D  +Y   V   C 
Sbjct: 690 HKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCV 749

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            G+L +AK +L +M   G   ++ +Y   + GL
Sbjct: 750 GGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGL 782


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 244/509 (47%), Gaps = 26/509 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+  +   G L +A+  LS MQ   ++P+ +  NT ++       L +A   L RM+
Sbjct: 212 FNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMK 271

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             GI P   TYN L+  Y  L  IK A  +++ M   G  PD  +Y  +   LC+     
Sbjct: 272 KEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQ----- 326

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQ 357
                              G+++EA +L ++M Q+G + PDVVTY  +V+   +      
Sbjct: 327 ------------------AGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSD 368

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  +L++M   G K + V++   + GLC  G+  EA   +    EE  TP+ ITY+ ++ 
Sbjct: 369 ALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLID 428

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
              + G +++A  ++ EMV+ G       +N L+ +LC+E + + A++ ++    +G   
Sbjct: 429 ASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVP 488

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           + V++ +++  + ++   E AL L D+M   K  P   TY T+I  LS  G++ EA + +
Sbjct: 489 DEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKL 548

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSF 595
            +++  GLVP   TY  +IH YC+ G +E   +   KM+  S +      N ++  LC +
Sbjct: 549 NELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLY 608

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
           G LE+A K+    +    K D  T + L+++         A +    M  R L PD+   
Sbjct: 609 GRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTY 668

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHI 684
             +   L   G+S EA  ++ +  E G +
Sbjct: 669 NVLLSALSEAGRSVEAQKMLHKLNESGKL 697



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 249/504 (49%), Gaps = 16/504 (3%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  ++   ++    + A  V+  M   G E     ++ L     +AGK+  A  +   M
Sbjct: 281 TYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM 340

Query: 203 QK-AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           ++   V+P+++  NT +       + + AL  LE M+  G+  +++T+N ++KG C   +
Sbjct: 341 EQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQ 400

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SN 312
           +++A+  ++ M  +G +PD ++Y T++   CK   + +   LM++MV           + 
Sbjct: 401 LEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNT 460

Query: 313 LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L ++   + R EEA+EL+    Q G +PD V+Y  V+  + +  + + A  +  +M    
Sbjct: 461 LLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRK 520

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             P+  +Y   + GL   GK  EA + +N   E    P+  TY++++H   +EG L +A 
Sbjct: 521 LTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAF 580

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
               +MV+  F P  V  N L+  LC  G+++ A K  +  + KG  V+V+ + +LI+  
Sbjct: 581 QFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQAL 640

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+  D++ AL    DM +    PD  TY  ++ ALS+ GR  EA +++ K+   G +   
Sbjct: 641 CKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGR 700

Query: 550 VTYRTVIHRY--CQVGRVEDLLKLLEKMLSKQ-KCRTAYNQVIENLCSFGYLEEAGKILG 606
             Y ++       + G+  ++   +E + + Q   + +YN+ I+ LC  G L+EA  +L 
Sbjct: 701 FFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLD 760

Query: 607 KVLRTASKADASTCHVLVESYLNK 630
           ++++     D ST   L+E  + +
Sbjct: 761 EMMQKGMSVDNSTYITLMEGLIKR 784



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 178/419 (42%), Gaps = 73/419 (17%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P+  T+  +V+  C  G L  A   L +M   G  P+ V+Y   LN  C  G   EAR +
Sbjct: 207 PNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTL 266

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +   ++E   P   TY+ ++    R G + +A DVV  M   GF P     N+L   LC+
Sbjct: 267 LARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQ 326

Query: 457 EGKMDGAKK------------------------------------FMQECLNKGCAVNVV 480
            GK+D A K                                     ++E   KG   ++V
Sbjct: 327 AGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLV 386

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG------------ 528
               +++G C++G LEEAL  L+ M      PD +TY T+IDA  K G            
Sbjct: 387 THNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEM 446

Query: 529 -----------------------RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                                  R EEA EL+     +G VP  V+Y TV+  Y +  + 
Sbjct: 447 VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKP 506

Query: 566 EDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           E  L L ++M+ ++     + YN +I+ L + G L EA   L +++      D +T +++
Sbjct: 507 EPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNII 566

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           + +Y  +G    A++   +M   +  PD+  C  +   L L G+ E+A  L   +VE+G
Sbjct: 567 IHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKG 625



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 201/431 (46%), Gaps = 15/431 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++   K +    A  +L  M  +G++      + ++    R G+L  A+  L
Sbjct: 349 DVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRL 408

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            MM +  + P+++  NT I        +AKA   ++ M  +G+  +  T N L+   C  
Sbjct: 409 EMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 468

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R ++A +L+   P +G  PD+VSY TVM    KE + +    L ++M+           
Sbjct: 469 KRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTY 528

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     G++ EA + +N++ +MG +PD  TY  +++ +C+ G+L++A +   +M  
Sbjct: 529 NTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVE 588

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +  KP+ V+    +NGLC  G+  +A ++  +  E+    + ITY+ ++  L ++  +  
Sbjct: 589 NSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDT 648

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A     +M  +G  P     N+L+ +L   G+   A+K + +    G       + S+  
Sbjct: 649 ALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKS 708

Query: 488 GF--CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
                + G   E  S ++ +   + D D  +Y   I  L   G+++EA  ++ +M+ KG+
Sbjct: 709 SVEAVETGKDPEVKSDIESVGNTQGD-DQESYNKYIKELCIGGQLKEAKAVLDEMMQKGM 767

Query: 546 VPTVVTYRTVI 556
                TY T++
Sbjct: 768 SVDNSTYITLM 778



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 129/335 (38%), Gaps = 48/335 (14%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D      +L  L K K  + A+ +LR   +RG      ++  +M AY +  K   A+ 
Sbjct: 452 KMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALC 511

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M K  + P++   NT I  L    KL +A+  L  +   G+ P+  TYN +I  YC
Sbjct: 512 LWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYC 571

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
               ++ A +  ++M      PD V+  T+M  LC   R+++   L E  V         
Sbjct: 572 KEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVI 631

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                         ++ A      M   G  PDV TY  +++     G   +A+KML ++
Sbjct: 632 TYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKL 691

Query: 366 YHHG-------------------------------CKPNTV-----SYTAFLNGLCHNGK 389
              G                                  NT      SY  ++  LC  G+
Sbjct: 692 NESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQ 751

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
             EA+ +++   ++  + +  TY  +M GL +  K
Sbjct: 752 LKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/251 (20%), Positives = 101/251 (40%), Gaps = 12/251 (4%)

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC------AVNVVNFTSLIRGFCQKGD 494
           FPT    +  + +  R      A + +     +GC      A N V  ++L R       
Sbjct: 133 FPTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAV-LSALARS--PSTS 189

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
            + +L     +   +  P+  T+  ++      G + +A   + KM   GL P  VTY T
Sbjct: 190 PQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNT 249

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +++ +C+ G + +   LL +M  +     R  YN ++      G++++A  ++  +    
Sbjct: 250 LLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFG 309

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI-PDLKLCKKVSERLILEGKSEEA 671
            + D  T +VL       G    A+K+   M    ++ PD+     + +      +S +A
Sbjct: 310 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDA 369

Query: 672 DTLMLRFVERG 682
             L+    E+G
Sbjct: 370 LNLLEEMREKG 380



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 69/179 (38%), Gaps = 4/179 (2%)

Query: 512 PDTVTYTTIIDALSKNGRVEEATEL--MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
           P       ++ AL+++        L     +++  L P   T+  ++H +C  G + D L
Sbjct: 170 PSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 229

Query: 570 KLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
             L KM           YN ++   C  G L EA  +L ++ +       +T + LV +Y
Sbjct: 230 STLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAY 289

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
              G    A  V   M      PDL     ++  L   GK +EA  L     + G + P
Sbjct: 290 ARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSP 348



 Score = 40.4 bits (93), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 10/181 (5%)

Query: 121 ERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
           E+    F  W ++  +   D I Y  +++ L K      A R    M  RG++  P+ F+
Sbjct: 612 EKAMKLFESWVEKGKKV--DVITYNTLIQALCKDNDVDTALRFFADMEVRGLQ--PDVFT 667

Query: 181 Y--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           Y  L+ A S AG+   A  +L  + ++           +I   V   +  K       ++
Sbjct: 668 YNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFY-PSIKSSVEAVETGKDPEVKSDIE 726

Query: 239 LAGITP--NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEK 295
             G T   +  +YN  IK  C   ++K+A  ++DEM  KG S D  +Y T+M G + ++K
Sbjct: 727 SVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786

Query: 296 R 296
           R
Sbjct: 787 R 787


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 234/458 (51%), Gaps = 14/458 (3%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           +R    RH P  I +  +L+  +K K    A  +   +  +GI+      + L+  +   
Sbjct: 48  NRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHM 107

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G++     VL+ + K    P+ +  NT I  L +  ++ KAL F +++   G   N ++Y
Sbjct: 108 GQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY 167

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-- 307
             LI G C +   + AIKL+ ++  +   P+ V Y T++  LCK + + E   L  +M  
Sbjct: 168 GTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTV 227

Query: 308 -------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                  V  S L +    +G+++EA  L+N+M      P+V TY  +V+  C+ G++ +
Sbjct: 228 KGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           AK +L  M     KP+ ++Y+  ++G     +  +A+ + N       TP+  TY+++++
Sbjct: 288 AKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN 347

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  +   + EA ++ +EM +K   P  V  + LI  LC+ G++      + E  ++G   
Sbjct: 348 GFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPA 407

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           NV+ ++SLI G C+ G L+ A++L + M      P+T T+T ++D L K GR+++A E+ 
Sbjct: 408 NVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVF 467

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
             +L+KG    V TY  +I  +C+ G +E+ L +L KM
Sbjct: 468 QDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKM 505



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 208/406 (51%), Gaps = 25/406 (6%)

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           + A+    R++L GI P+++T N LI  +C + +I     ++ ++  +G  PD V+  T+
Sbjct: 76  STAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTL 135

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +  LC + ++K+              FHD+        L+ Q  Q+    + V+Y  ++N
Sbjct: 136 IKGLCLKGQVKKALH-----------FHDK--------LLAQGFQL----NQVSYGTLIN 172

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G C++G+   A K+LQ++     KPN V Y+  ++ LC      EA  + +    +  + 
Sbjct: 173 GVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 232

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           + +TYS +++G   EGKL EA  ++ EMV K   P     N+L+ +LC+EGK+  AK  +
Sbjct: 233 DVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL 292

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
              L      +V+ +++L+ G+    ++++A  + + M L    PD  TYT +I+   KN
Sbjct: 293 AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AY 585
             V+EA  L  +M  K +VP +VTY ++I   C+ GR+  +  L+++M  + +      Y
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITY 412

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           + +I+ LC  G+L+ A  +  K+     + +  T  +L++     G
Sbjct: 413 SSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGG 458



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 194/393 (49%), Gaps = 26/393 (6%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           +L+A+ G +    ++  L+    + G  R A+ +L  +      PN+++ +T I  L   
Sbjct: 154 KLLAQ-GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKY 212

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             +++A      M + GI+ +V+TY+ LI G+C   ++K+AI L++EM LK  +P+  +Y
Sbjct: 213 QLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTY 272

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI-PDVVTYT 343
             ++  LCKE ++KE + ++  M+                          C+ PDV+TY+
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLK------------------------ACVKPDVITYS 308

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            +++G+  V E+ +A+ +   M   G  P+  +YT  +NG C N    EA  +     ++
Sbjct: 309 TLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P  +TYS ++ GL + G++    D++ EM  +G     +  + LI  LC+ G +D A
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRA 428

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
                +  ++G   N   FT L+ G C+ G L++A  +  D+       +  TY  +ID 
Sbjct: 429 IALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDG 488

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
             K G +EEA  ++ KM   G +P  VT+  +I
Sbjct: 489 HCKQGLLEEALTMLSKMEDNGCIPDAVTFEIII 521



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 183/374 (48%), Gaps = 24/374 (6%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            D R A++     D +   + + ++Y  +++ L K +L   A  +   M  +GI      
Sbjct: 178 GDTRAAIKLLQKIDGRLT-KPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           +S L+  +   GKL+ A+ +L+ M    + PN+   N  +  L    K+ +A   L  M 
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
            A + P+V+TY+ L+ GY  ++ +K A  + + M L G +PD  +Y  ++   CK K + 
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV- 355

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                                 +EA  L  +M Q   +P +VTY+++++G C+ G +   
Sbjct: 356 ----------------------DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYV 393

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             ++ +M+  G   N ++Y++ ++GLC NG    A  + N  +++   PN  T+++++ G
Sbjct: 394 WDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDG 453

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L + G+L +A +V ++++ KG+       N++I   C++G ++ A   + +  + GC  +
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPD 513

Query: 479 VVNFTSLIRGFCQK 492
            V F  +I    +K
Sbjct: 514 AVTFEIIIIALFKK 527



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 164/340 (48%), Gaps = 49/340 (14%)

Query: 314 FHDQG-RIEEAKELVNQMSQMGCI---PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           FH Q   I+   + V+Q ++M C+   P ++ +  +++ F ++     A  +  ++   G
Sbjct: 30  FHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKG 89

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            +P+ ++    +N  CH G+                    IT+                 
Sbjct: 90  IQPDLITLNILINCFCHMGQ--------------------ITFGF--------------- 114

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            V+ +++K+G+ P  V +N LI+ LC +G++  A  F  + L +G  +N V++ +LI G 
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGV 174

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ GD   A+ LL  +      P+ V Y+TIIDAL K   V EA  L  +M  KG+   V
Sbjct: 175 CKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
           VTY T+I+ +C  G++++ + LL +M+ K        YN +++ LC  G ++EA  +L  
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKV--ACRMFN 645
           +L+   K D  T   L++ Y       L Y+V  A  +FN
Sbjct: 295 MLKACVKPDVITYSTLMDGY------FLVYEVKKAQHVFN 328



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 135/258 (52%), Gaps = 2/258 (0%)

Query: 323  AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
            A  L +++   G  PD+ T   ++N FC +G++     +L ++   G  P+T+++T  +N
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 383  GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
            GLC  G+  +A    +    + +  N ++Y  +++G+ + G    A  ++R++  +   P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 443  TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
              V  N +I +LC+   +  A     E   KG + +VV + +LI GFC  G L+EA+ LL
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 503  DDMYLCKKDPDTVTYTTIIDALSKNGR--VEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
            + M L   +P+  TY  ++DAL K G+  ++E+  ++ KM   G     VT+  +I    
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 561  QVGRVEDLLKLLEKMLSK 578
            +    + + KLL +M+++
Sbjct: 1185 EKDENDKVEKLLHEMIAR 1202



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 138/308 (44%), Gaps = 37/308 (12%)

Query: 136  RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
            R  H+P+ +Y     LS              +  +GI+      + L+  +   G++   
Sbjct: 933  RIPHNPMKHYSTAVSLSHR------------LELKGIQPDLFTLNILINCFCHMGQITFN 980

Query: 196  MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
              +L+ + K    P+ +   T I+ L +  ++ KAL F +++   G   N ++Y  LI G
Sbjct: 981  FSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLING 1040

Query: 256  YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
             C +   + AIKL+ ++  +   PD V Y T++  LCK +                    
Sbjct: 1041 VCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQ-------------------- 1080

Query: 316  DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
                + +A  L  +M+  G   DVVTY  ++ GFC VG+L +A  +L +M      PN  
Sbjct: 1081 ---LVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVR 1137

Query: 376  SYTAFLNGLCHNGKSL--EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            +Y   ++ LC  GK L  E+  M++  E+     NA+T+ +++  L  + +  +   ++ 
Sbjct: 1138 TYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLH 1197

Query: 434  EMVKKGFF 441
            EM+ +G  
Sbjct: 1198 EMIARGLL 1205



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 119/237 (50%), Gaps = 2/237 (0%)

Query: 312  NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
            N F   G+I     ++ ++ + G  PD +T+T ++NG C  G++++A     ++   G +
Sbjct: 969  NCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQ 1028

Query: 372  PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
             N VSY   +NG+C  G +  A +++   +     P+ + Y+ ++  L +   +S+A  +
Sbjct: 1029 LNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGL 1088

Query: 432  VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
              EM  KG     V  N LI   C  GK+  A   + + + K    NV  +  L+   C+
Sbjct: 1089 FFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCK 1148

Query: 492  KGD--LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            +G   L+E+LS+L  M       + VT+  II AL +    ++  +L+ +M+++GL+
Sbjct: 1149 EGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGLL 1205



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 113/245 (46%), Gaps = 41/245 (16%)

Query: 426  SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            S A  +   +  KG  P    +N+LI   C  G++      + + L +G   + + FT+L
Sbjct: 943  STAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTL 1002

Query: 486  IRGFCQKGDLEEALSLLDDMY-----------------LCK------------------K 510
            I G C KG + +AL   D +                  +CK                   
Sbjct: 1003 INGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLT 1062

Query: 511  DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
             PD V Y TIIDAL K+  V +A  L  +M  KG+   VVTY T+I+ +C VG++++ + 
Sbjct: 1063 KPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIG 1122

Query: 571  LLEKMLSKQ---KCRTAYNQVIENLCSFG--YLEEAGKILGKVLRTASKADASTCHVLVE 625
            LL KM+ K      RT YN +++ LC  G   L+E+  +L K+     KA+A T  +++ 
Sbjct: 1123 LLNKMVLKTINPNVRT-YNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIIS 1181

Query: 626  SYLNK 630
            +   K
Sbjct: 1182 ALFEK 1186


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 240/507 (47%), Gaps = 29/507 (5%)

Query: 95  LEGELRNLLRSLKPRQICAVLRSQADERVALQFFY-WADRQWRYRHDPIVYYMMLEILSK 153
           +E  L  L R +    +  + +   D  +A + F   +  ++ ++H       +L++ ++
Sbjct: 72  IEAALDRLRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFAR 131

Query: 154 TKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA-AVAPNLL 212
           TK  + A  +L+           E ++ L+  Y  A +   A  V+  M++   VAP+L 
Sbjct: 132 TKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLK 191

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
             N  +H L    K+  A+   E ++ + +  +  T++ LI G      +  A  L  E 
Sbjct: 192 THNLVLHGLCKSGKVLAAMDHFEAVRRS-MPVSAATFSILINGLVKAGMMIQAHSLAQET 250

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQ 332
              GC+ D  +Y  ++ +L K K+I+E   LMEK+  +                      
Sbjct: 251 TTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITAN---------------------- 288

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            GC P + TY A++NG C++G L++A  +L+++  +GC P+ V+YT+ ++GL    +S E
Sbjct: 289 -GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE 347

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A ++           + + Y+ ++ GL + GK+ +A  V + M   G  P  V ++ +I 
Sbjct: 348 AYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMID 407

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            L + G++  A +  +    +G A N V +++LI G C+   ++ AL +L  M      P
Sbjct: 408 GLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 467

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           DT+TY  +ID L K+G VE A     +ML  G  P V TY  +I   C+ G  +    +L
Sbjct: 468 DTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVL 527

Query: 573 EKMLSKQKCRTAYNQVIENLCSFGYLE 599
           + M S    R  Y+ +++ LC  G LE
Sbjct: 528 DDMSSS---RFVYSSLVDGLCKSGKLE 551



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 197/427 (46%), Gaps = 39/427 (9%)

Query: 219 HVLVVGNKLAKALRFLERMQLAG----------ITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           H +  GN L       +R + AG            P+V T+N LI GYC     ++A  +
Sbjct: 117 HSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAV 176

Query: 269 IDEMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELV 327
           I EM    G +P   ++  V+  LCK  ++    D  E +     +              
Sbjct: 177 IREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPV-------------- 222

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
                        T++ ++NG  + G + QA  + Q+   +GC  +  +YTA +N L  N
Sbjct: 223 ----------SAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKN 272

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            K  EA  ++        TP   TY+ +++GL + G+L EA D++R++V  G  P  V  
Sbjct: 273 KKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 332

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             LI  L +E +   A K  +E  ++G A++ V +T+LIRG  Q G + +A S+   M  
Sbjct: 333 TSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTS 392

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD VT +T+ID LSK GR+  A  +   M ++GL P  V Y  +IH  C+  +++ 
Sbjct: 393 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 452

Query: 568 LLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
            L++L +M  K  C      YN +I+ LC  G +E A     ++L    K D  T ++L+
Sbjct: 453 ALEMLAQM-KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 511

Query: 625 ESYLNKG 631
                 G
Sbjct: 512 SGLCKAG 518



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 211/482 (43%), Gaps = 84/482 (17%)

Query: 156 LCQGAKRVLRLM-----ARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           LC+  K VL  M      RR +      FS L+    +AG +  A  +           +
Sbjct: 200 LCKSGK-VLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTID 258

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           +      ++ L    K+ +A+  +E++   G TP + TYN L+ G C + R+++AI L+ 
Sbjct: 259 IHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 318

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFH-------DQG 318
           ++   GC+PD V+Y +++  L KEKR  E   L ++M +     D+  +          G
Sbjct: 319 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTG 378

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           +I +A  +   M+  GC+PDVVT + +++G  + G +  A ++ + M   G  PN V Y+
Sbjct: 379 KIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYS 438

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           A ++GLC   K   A EM+   ++ + TP+ ITY++++ GL + G +  A     EM++ 
Sbjct: 439 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 498

Query: 439 GFFPTPVEINLLIQSLCREGKMDG---------AKKFMQECL----------NKGC---- 475
           G  P     N+LI  LC+ G  D          + +F+   L            GC    
Sbjct: 499 GCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFH 558

Query: 476 ------AVNVVNFTSLIRGFCQKGDLEEALSLLDDM----------------YLCKKD-- 511
                   N    T LI   C+   ++EA+SL + +                 L K    
Sbjct: 559 EMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKV 618

Query: 512 ---------------PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
                          PD VTY  +++ +    R++ A    ++M  +G VP V    +++
Sbjct: 619 NEGQAVYQEMTRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPV----SIL 674

Query: 557 HR 558
           H+
Sbjct: 675 HK 676



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 148/317 (46%), Gaps = 15/317 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
           D + Y  ++  L +T     A  V + M   G  C P+    S ++   S+AG++  A+ 
Sbjct: 363 DTVCYTALIRGLLQTGKIPQASSVYKTMTSHG--CVPDVVTLSTMIDGLSKAGRIGAAVR 420

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M+   +APN ++ +  IH L    K+  AL  L +M+ A  TP+ +TYN LI G C
Sbjct: 421 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLC 480

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD- 316
               ++ A    DEM   GC PD  +Y  ++  LCK         +++ M +   ++   
Sbjct: 481 KSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSL 540

Query: 317 ------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                  G++E    L ++M + G + +  T T ++   C+   +D+A  +   +   G 
Sbjct: 541 VDGLCKSGKLEGGCMLFHEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG- 598

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            P+  +Y + ++ L  +GK  E  + +      WW P+ +TY+ +++G+    ++  A  
Sbjct: 599 MPHPYAYNSIISALIKSGKVNEG-QAVYQEMTRWWKPDRVTYNALLNGMIGANRMDRAHY 657

Query: 431 VVREMVKKGFFPTPVEI 447
              EM  +G+ P PV I
Sbjct: 658 YYLEMTGRGYVP-PVSI 673



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 144/346 (41%), Gaps = 37/346 (10%)

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMY--HHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           ++  AVV  F  + + D A ++ Q +     G + +  +  A L+      +  EA  ++
Sbjct: 83  ISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLL 142

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK-GFFPTPVEINLLIQSLCR 456
                  + P+  T++V++ G     +  EA  V+REM +  G  P+    NL++  LC+
Sbjct: 143 KNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCK 202

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            GK+  A     E + +   V+   F+ LI G  + G + +A SL  +        D  T
Sbjct: 203 SGKVLAAMDHF-EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHT 261

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           YT I++ L+KN +++EA  LM K+ + G  PT+ TY                        
Sbjct: 262 YTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATY------------------------ 297

Query: 577 SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
                    N ++  LC  G LEEA  +L K++      D  T   L++    +     A
Sbjct: 298 ---------NALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 348

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           YK+   M +R L  D      +   L+  GK  +A ++       G
Sbjct: 349 YKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHG 394


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 248/517 (47%), Gaps = 33/517 (6%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ A ++  K    + +   MQ   ++ +L   +  I+     ++L+ AL  L +M 
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+++T + L+ GYC   RI DA+ L+D+M   G  PD  ++ T++  L       
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL------- 198

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                           H++    EA  LV+QM Q GC PD+VTY  VVNG C+ G++D A
Sbjct: 199 --------------FLHNKA--SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L +M     K N V +   ++ LC       A ++    E +   PN +TY+ +++ 
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L   G+ S+A  ++  M++K   P  V  N LI +  +EGK+  A+K  +E + +    +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATEL 536
            + +  LI GFC    L+EA  +    ++  KD  P+  TY T+I+   K  RVE+  EL
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFK--FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCS 594
             +M  +GLV   VTY T+I  + Q G  +    + ++M+S +       Y+ ++  LCS
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
           +G L+ A  I   + ++  + +    + ++E     G    A+ + C +   ++ PD+  
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVT 537

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
              +   L  +   +EAD L  +  E G + P S  +
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTL-PNSGTY 573



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 222/474 (46%), Gaps = 13/474 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI      +S  +  + R  +L  A+ VL+ M K    P+++  ++ ++      +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           ++ A+  +++M   G  P+  T+  LI G    ++  +A+ L+D+M  +GC PD V+Y T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228

Query: 287 VMGYLCKEKRIKEVRDLMEKM--------VNDSNLFHDQ----GRIEEAKELVNQMSQMG 334
           V+  LCK   I    +L+ KM        V   N   D       +E A +L  +M   G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P+VVTY +++N  C  G    A ++L  M      PN V++ A ++     GK +EA 
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           ++     +    P+ ITY+++++G     +L EA  + + MV K   P     N LI   
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+  +++   +  +E   +G   N V +T++I+GF Q GD + A  +   M   +   D 
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           +TY+ ++  L   G+++ A  +   +    +   +  Y T+I   C+ G+V +   L   
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528

Query: 575 MLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           +  K    T YN +I  LCS   L+EA  +  K+    +  ++ T + L+ + L
Sbjct: 529 LSIKPDVVT-YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 209/443 (47%), Gaps = 25/443 (5%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           K+ +A+ +   M K+   P+++  N  +  +   NK    +   E+MQ  GI+ ++ TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
             I  +C   ++  A+ ++ +M   G  PD V+  +++   C  KRI             
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI------------- 169

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                      +A  LV+QM +MG  PD  T+T +++G     +  +A  ++ QM   GC
Sbjct: 170 ----------SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P+ V+Y   +NGLC  G    A  ++N  E      N + ++ ++  L +   +  A D
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +  EM  KG  P  V  N LI  LC  G+   A + +   L K    NVV F +LI  F 
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           ++G L EA  L ++M     DPDT+TY  +I+    + R++EA ++   M+SK  +P + 
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKV 608
           TY T+I+ +C+  RVED ++L  +M  +        Y  +I+     G  + A  +  ++
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459

Query: 609 LRTASKADASTCHVLVESYLNKG 631
           +      D  T  +L+    + G
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYG 482



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 209/482 (43%), Gaps = 53/482 (10%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           HD   Y + +    +      A  VL  M + G E      S L+  Y  + ++ +A+ +
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA---------------------------- 230
           +  M +    P+     T IH L + NK ++A                            
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235

Query: 231 -------LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
                  L  L +M+ A I  NV+ +N +I   C    ++ A+ L  EM  KG  P+ V+
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295

Query: 284 YYTVMGYLCKEKRIKE----VRDLMEKMVNDS--------NLFHDQGRIEEAKELVNQMS 331
           Y +++  LC   R  +    + +++EK +N +        + F  +G++ EA++L  +M 
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
           Q    PD +TY  ++NGFC    LD+AK+M + M    C PN  +Y   +NG C   +  
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           +  E+     +     N +TY+ ++ G  + G    A  V ++MV        +  ++L+
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LC  GK+D A    +        +N+  + ++I G C+ G + EA  L   + +    
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI---K 532

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH---RYCQVGRVEDL 568
           PD VTY T+I  L     ++EA +L  KM   G +P   TY T+I    R C      +L
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592

Query: 569 LK 570
           +K
Sbjct: 593 IK 594



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 175/354 (49%), Gaps = 4/354 (1%)

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
           G  P   S++ + G  C E+          +++   N   D  ++++A +L   M +   
Sbjct: 22  GNPPTVPSFFNLCGSGCWERSFASASGDYREILR--NRLSDIIKVDDAVDLFGDMVKSRP 79

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            P +V +  +++   ++ + +    + +QM   G   +  +Y+ F+N  C   +   A  
Sbjct: 80  FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           ++    +  + P+ +T S +++G     ++S+A  +V +MV+ G+ P       LI  L 
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
              K   A   + + + +GC  ++V + +++ G C++GD++ AL+LL+ M   +   + V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            + TIID+L K   VE A +L  +M +KG+ P VVTY ++I+  C  GR  D  +LL  M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319

Query: 576 LSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           L K+       +N +I+     G L EA K+  ++++ +   D  T ++L+  +
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 188/409 (45%), Gaps = 34/409 (8%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLR 193
           R + + +++  +++ L K +  + A  +   M  +GI  RP   +Y  L+      G+  
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI--RPNVVTYNSLINCLCNYGRWS 310

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
           +A  +LS M +  + PN++  N  I       KL +A +  E M    I P+ +TYN LI
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            G+C  +R+ +A ++   M  K C P+  +Y T++   CK K                  
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK------------------ 412

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                R+E+  EL  +MSQ G + + VTYT ++ GF + G+ D A+ + +QM  +    +
Sbjct: 413 -----RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            ++Y+  L+GLC  GK   A  +    ++     N   Y+ ++ G+ + GK+ EA D+  
Sbjct: 468 IMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFC 527

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            +  K   P  V  N +I  LC +  +  A    ++    G   N   + +LIR   +  
Sbjct: 528 SLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDC 584

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           D   +  L+ +M       D  T + + + L  +GR++++    + MLS
Sbjct: 585 DRAASAELIKEMRSSGFVGDASTISLVTNML-HDGRLDKS---FLNMLS 629


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 255/524 (48%), Gaps = 27/524 (5%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           VL LM +RG        + L+    R  +   A+ +L  M++ ++ P++   NT I    
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
            G +L KAL     M+ +G + +++T+  LI  +C   ++ +A+  + EM   G   D V
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
            Y +++   C                       D G ++  K L +++ + G  P  +TY
Sbjct: 249 VYTSLIRGFC-----------------------DCGELDRGKALFDEVLERGDSPCAITY 285

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             ++ GFC++G+L +A ++ + M   G +PN  +YT  ++GLC  GK+ EA + +N   E
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIE 345

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
           +   PNA+TY+++++ L ++G +++A ++V  M K+   P  +  N+L+  LC +G +D 
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405

Query: 463 AKKFMQECLNKGCAV--NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           A K +   L        +V+++ +LI G C++  L +AL + D +       D VT   +
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-- 578
           +++  K G V +A EL  ++    +V    TY  +I  +C+ G +     LL KM     
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
           Q     YN ++ +LC  G L++A ++  ++ R  +  D  + +++++  L  G    A  
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +   M    L PDL    K+  R +  G  +EA +   + V+ G
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 141/557 (25%), Positives = 257/557 (46%), Gaps = 36/557 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           Y H+     ++L+ L +   C  A  +LR M R  +   P+ FSY  V   +    +L  
Sbjct: 143 YNHN-----ILLKGLCRNLECGKAVSLLREMRRNSL--MPDVFSYNTVIRGFCEGKELEK 195

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ + + M+ +  + +L+     I       K+ +A+ FL+ M+  G+  +++ Y  LI+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G+CD   +     L DE+  +G SP  ++Y T++   CK                     
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK--------------------- 294

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G+++EA E+   M + G  P+V TYT +++G C VG+  +A + L  M     +PN 
Sbjct: 295 --LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNA 352

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y   +N LC +G   +A E++   ++    P+ ITY++++ GL  +G L EA  ++  
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412

Query: 435 MVKKGFFPTP--VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           M+K   +  P  +  N LI  LC+E ++  A       + K  A + V    L+    + 
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           GD+ +A+ L   +   K   ++ TYT +ID   K G +  A  L+ KM    L P+V  Y
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLR 610
             ++   C+ G ++   +L E+M          ++N +I+     G ++ A  +L  + R
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                D  T   L+  +L  G    A     +M +    PD  +C  V +  I +G++++
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDK 652

Query: 671 ADTLMLRFVERGHIQPK 687
              L+ + V++  +  K
Sbjct: 653 LTELVKKLVDKDIVLDK 669



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 199/431 (46%), Gaps = 27/431 (6%)

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           K   A   L  M   G   NV  +N L+KG C       A+ L+ EM      PD  SY 
Sbjct: 122 KTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYN 181

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
           TV+   C+ K +                       E+A EL N+M   GC   +VT+  +
Sbjct: 182 TVIRGFCEGKEL-----------------------EKALELANEMKGSGCSWSLVTWGIL 218

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++ FC+ G++D+A   L++M   G + + V YT+ + G C  G+    + + +   E   
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           +P AITY+ ++ G  + G+L EA ++   M+++G  P       LI  LC  GK   A +
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            +   + K    N V +  +I   C+ G + +A+ +++ M   +  PD +TY  ++  L 
Sbjct: 339 PLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398

Query: 526 KNGRVEEATELMMKML--SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC-- 581
             G ++EA++L+  ML  S    P V++Y  +IH  C+  R+   L + + ++ K     
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
           R   N ++ +    G + +A ++  ++  +    ++ T   +++ +   G+  +A  + C
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518

Query: 642 RMFNRNLIPDL 652
           +M    L P +
Sbjct: 519 KMRVSELQPSV 529



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 189/413 (45%), Gaps = 16/413 (3%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P A +Y  L+  + + G+L+ A  +   M +  V PN+      I  L    K  +AL+ 
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQP 339

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           L  M      PN +TYN +I   C    + DA+++++ M  +   PD ++Y  ++G LC 
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399

Query: 294 EKRIKEVRDLMEKMVNDSN-----------LFHD---QGRIEEAKELVNQMSQMGCIPDV 339
           +  + E   L+  M+ DS+           L H    + R+ +A ++ + + +     D 
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           VT   ++N   + G++++A ++ +Q+       N+ +YTA ++G C  G    A+ ++  
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
                  P+   Y+ ++  L +EG L +A  +  EM +   FP  V  N++I    + G 
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +  A+  +      G + ++  ++ LI  F + G L+EA+S  D M     +PD     +
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           ++      G  ++ TEL+ K++ K +V       TV+   C      DL K L
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRL 692



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 164/332 (49%), Gaps = 9/332 (2%)

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
           +LM K+V   N  H     E A     +M +     + V+ + ++  + ++ +   A  +
Sbjct: 77  NLMAKLVRSRN--H-----ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGV 129

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L  M   G   N  ++   L GLC N +  +A  ++         P+  +Y+ V+ G   
Sbjct: 130 LALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE 189

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
             +L +A ++  EM   G   + V   +LI + C+ GKMD A  F++E    G   ++V 
Sbjct: 190 GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +TSLIRGFC  G+L+   +L D++      P  +TY T+I    K G+++EA+E+   M+
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLE 599
            +G+ P V TY  +I   C VG+ ++ L+ L  M+ K +   A  YN +I  LC  G + 
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +A +I+  + +  ++ D  T ++L+     KG
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 117/257 (45%), Gaps = 16/257 (6%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           ++ R R D I Y ++L  L        A ++L LM +      P+  SY  L+    +  
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L  A+ +  ++ +   A + +  N  ++  +    + KA+   +++  + I  N  TY 
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYT 498

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            +I G+C    +  A  L+ +M +    P    Y  ++  LCKE  + +   L E+M  D
Sbjct: 499 AMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRD 558

Query: 311 SNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
           +N F D              G I+ A+ L+  MS+ G  PD+ TY+ ++N F ++G LD+
Sbjct: 559 NN-FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617

Query: 358 AKKMLQQMYHHGCKPNT 374
           A     +M   G +P+ 
Sbjct: 618 AISFFDKMVDSGFEPDA 634



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 2/265 (0%)

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
           A   S +M  L R      A    R+M++   F   V ++ L++   +  K   A   + 
Sbjct: 72  AFAGSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
             L +G A NV N   L++G C+  +  +A+SLL +M      PD  +Y T+I    +  
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYN 586
            +E+A EL  +M   G   ++VT+  +I  +C+ G++++ +  L++M  +  +     Y 
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I   C  G L+    +  +VL       A T + L+  +   G    A ++   M  R
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311

Query: 647 NLIPDLKLCKKVSERLILEGKSEEA 671
            + P++     + + L   GK++EA
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEA 336


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 158/638 (24%), Positives = 288/638 (45%), Gaps = 52/638 (8%)

Query: 92  SPKLE--GELRNLLRSLKPRQICAVLRSQ-ADERVALQFFYWADRQWRYRHDPIVYYMML 148
           SP  E    L++L+  + P     V+  Q +D  + ++FF W  +   Y  DP     +L
Sbjct: 51  SPNWEKNSSLKSLVSHMSPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLL 110

Query: 149 EILSKTKLCQGAKRVLRLMARRGIECRPE----------------------AFSYLMVAY 186
           +++  + L + A  V+  + R    C  E                       +S L+++ 
Sbjct: 111 KLIVSSGLFRVAHDVIVALIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSL 170

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
           ++      A      M+       ++   T ++ L        A  F+ ++   G   + 
Sbjct: 171 AKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDS 230

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKG-CSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
                L+ G+C    ++DA+K+ D M  +G C+P+ VSY  ++  LC             
Sbjct: 231 HIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLC------------- 277

Query: 306 KMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                     + GR+EEA  L +QM + GC P   TYT ++   C  G +D+A  +  +M
Sbjct: 278 ----------EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              GCKPN  +YT  ++GLC +GK  EA  +     ++   P+ ITY+ +++G  ++G++
Sbjct: 328 IARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRV 387

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             A +++  M K+   P     N L++ LCR GK   A   ++  L+ G + ++V++  L
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G C++G +  A  LL  M     +PD +T+T II+A  K G+ + A+  +  ML KG+
Sbjct: 448 IDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGK 603
               VT  T+I   C VG+  D L +LE ++  +   T +  N +++ L     L+E   
Sbjct: 508 SLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELA 567

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           +LGK+ +        T   LV+  +  G    ++++   M     +P++     +   L 
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLC 627

Query: 664 LEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVFLNS 701
             G+ EEA+ L+    + G + P    +    + ++N+
Sbjct: 628 QFGRVEEAEKLLSAMQDSG-VSPNHVTYTVMVKGYVNN 664



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 225/485 (46%), Gaps = 48/485 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  ++  L K    + A+  +  + + G        + L++ + R   LR+A+ V  +
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDL 255

Query: 202 MQK-AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           M +    APN +  +  IH L    +L +A    ++M   G  P+  TY  LIK  CD  
Sbjct: 256 MSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------- 311
            I  A  L DEM  +GC P+  +Y  ++  LC++ +I+E   +  KMV D          
Sbjct: 316 LIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYN 375

Query: 312 ---NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
              N +   GR+  A EL+  M +  C P+V T+  ++ G CRVG+  +A  +L++M  +
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G  P+ VSY   ++GLC  G    A +++ +       P+ +T++ +++   ++GK   A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVA 495

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ------------------EC 470
              +  M++KG     V    LI  +C  GK   A   ++                  + 
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDM 555

Query: 471 LNKGCAV-----------------NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           L+KGC +                 +VV +T+L+ G  + GD+  +  +L+ M L    P+
Sbjct: 556 LSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPN 615

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
              YT II+ L + GRVEEA +L+  M   G+ P  VTY  ++  Y   G+++  L+ + 
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675

Query: 574 KMLSK 578
            M+ +
Sbjct: 676 AMVER 680



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/588 (23%), Positives = 267/588 (45%), Gaps = 24/588 (4%)

Query: 122 RVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           R AL+ F    R+     + + Y +++  L +    + A  +   M  +G +     ++ 
Sbjct: 247 RDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTV 306

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+ A    G +  A  +   M      PN+      I  L    K+ +A     +M   G
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDG 366

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I P+V+TYN LI GYC   R+  A +L+  M  + C P+  ++  +M  LC+  +  +  
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426

Query: 302 DLMEKMVNDS--------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            L+++M+++         N+  D    +G +  A +L+  M+     PD +T+TA++N F
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAF 486

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G+ D A   L  M   G   + V+ T  ++G+C+ GK+ +A  ++ T  +       
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTP 546

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            + +V++  L +  KL E   ++ ++ K G  P+ V    L+  L R G + G+ + ++ 
Sbjct: 547 HSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLEL 606

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
               GC  NV  +T +I G CQ G +EEA  LL  M      P+ VTYT ++     NG+
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGK 666

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR---------VEDLLKLLEKMLSKQK 580
           ++ A E +  M+ +G       Y +++  +    +         +++L+ ++E++     
Sbjct: 667 LDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTS 726

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               +  ++  LC  G  +E+  ++  +L++    + +   +++ESY +K       ++ 
Sbjct: 727 GLCIF--LVTRLCKEGRTDESNGLVQTILKSGVFLEKAI-DIIMESYCSKKKHTKCVELI 783

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
             +     +P  K    V + L  EG +E A  L++  +    +  KS
Sbjct: 784 TLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKS 831



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 172/407 (42%), Gaps = 64/407 (15%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  ++    K      A   L LM R+GI       + L+      GK R+A+++L
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFIL 534

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + K  +       N  + +L  G KL + L  L ++   G+ P+V+TY  L+ G    
Sbjct: 535 ETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             I  + ++++ M L GC P+   Y  ++  LC+                        GR
Sbjct: 595 GDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQ-----------------------FGR 631

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +EEA++L++ M   G  P+ VTYT +V G+   G+LD+A + ++ M   G + N   Y++
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691

Query: 380 FLNGLCHNGKSLE------AREMINTSEEEWWTPNAITYSVVMHGLRREGK--------- 424
            L G   + K +        +E+I+  E+   + + +   +V   L +EG+         
Sbjct: 692 LLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTR-LCKEGRTDESNGLVQ 750

Query: 425 --------LSEACDVVRE-----------------MVKKGFFPTPVEINLLIQSLCREGK 459
                   L +A D++ E                 ++K GF P+     L+IQ L +EG 
Sbjct: 751 TILKSGVFLEKAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGD 810

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            + A++ + E L     V        +    + GD  E + L+D ++
Sbjct: 811 TERARELVMELLTSNGVVEKSGVLPYVECLMETGDCSEVIDLVDQLH 857


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 149/502 (29%), Positives = 252/502 (50%), Gaps = 34/502 (6%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L +A  VL  ++++  A + +  NT +       +LA A R LE  +++G   NV+TY 
Sbjct: 125 RLADAERVLDALKESGSA-DAVSHNTLVAGYCRDGRLADAERVLEAAKVSGAA-NVVTYT 182

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI GYC   R+ DA+ LI  MP+   +PD  +Y TV+  LC  K+ ++  +LME+M+ +
Sbjct: 183 ALINGYCRSGRLADALNLIASMPV---APDTYTYNTVLKGLCGAKQWEKAEELMEEMIRN 239

Query: 311 S------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
           +              F   G ++ A +L+ +M + GC PDVV Y+ +VNGF   G +D A
Sbjct: 240 NCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDA 299

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +L  M    CKPNTV Y A L GLC   +  +  E+I     +   PN  T+S++   
Sbjct: 300 LVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSC 356

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L + G +  A +VV +M K G  P  V  N LI     +G++D A   +   L   C  +
Sbjct: 357 LCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPD 413

Query: 479 VVNFTSLIRGFCQKG---DLEEALS--LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
            ++F + ++  C+     D+EE ++  L +D  L +     +T+  +ID+L ++G V  A
Sbjct: 414 TISFNAALKALCRTERWYDVEELIAQMLREDCPLIE-----MTFNILIDSLCQHGLVNHA 468

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLC 593
            E+  +M      P +VTY ++I+ + + G VE  ++L + M  K     +YN V++ LC
Sbjct: 469 IEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCKPDI-FSYNAVLKGLC 527

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
                E+AG+++  + R     +  T ++L+ S   KG    A +V  +M      PD+ 
Sbjct: 528 RAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIF 587

Query: 654 LCKKVSERLILEGKSEEADTLM 675
               +      +G+ ++A  L+
Sbjct: 588 TYNALINGFSEQGRLDDALNLL 609



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 219/449 (48%), Gaps = 24/449 (5%)

Query: 176 PEAFSYLMVAYSRAG--KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+ ++Y  V     G  +   A  ++  M +    PN +   T I        L  A++ 
Sbjct: 208 PDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQL 267

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           LERM   G TP+V+ Y+ L+ G+ +  R+ DA+ L++ M    C P+ V Y   +  LC 
Sbjct: 268 LERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTM---LCKPNTVCYNAALKGLCM 324

Query: 294 EKRIKEVRDLMEKMVND------------SNLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
            +R K+V +L+ +MV              ++     G ++ A E+V QM + GC PDVV 
Sbjct: 325 AERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVI 384

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y  ++N F   G +D A  +L  M    C P+T+S+ A L  LC   +  +  E+I    
Sbjct: 385 YNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQML 441

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
            E      +T+++++  L + G ++ A +V  +M K    P  V  + LI     +G ++
Sbjct: 442 REDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVE 501

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A +  Q   +  C  ++ ++ ++++G C+    E+A  L+ +M      P+ +T+  +I
Sbjct: 502 SAIELFQ---SMPCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILI 558

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           ++L + G  + A E+  +M   G  P + TY  +I+ + + GR++D L LL  M  K   
Sbjct: 559 NSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCKPDA 618

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLR 610
             +YN  ++ LC     +EA +I+ ++LR
Sbjct: 619 -ISYNSTLKGLCRAERWKEAEEIVAEMLR 646



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 214/461 (46%), Gaps = 59/461 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  +L+ L   K  + A+ ++  M R         F+  + ++ + G L +A+ +L
Sbjct: 209 DTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLL 268

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +    P+++I +T ++      ++  AL  L  M      PN + YN  +KG C  
Sbjct: 269 ERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMA 325

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R KD  +LI EM  K C P++ ++  +   LC+   +    +++E+M            
Sbjct: 326 ERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIY 385

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV--------------- 352
               N F +QGR+++A  L++ M    C PD +++ A +   CR                
Sbjct: 386 NTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLR 442

Query: 353 --------------------GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
                               G ++ A ++ +QM  + C P+ V+Y++ +NG    G    
Sbjct: 443 EDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVES 502

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A E+  +   +   P+  +Y+ V+ GL R  +  +A +++  M +K   P  +  N+LI 
Sbjct: 503 AIELFQSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILIN 559

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           SLC++G  D A +  ++    G   ++  + +LI GF ++G L++AL+LL  M  CK  P
Sbjct: 560 SLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMS-CK--P 616

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           D ++Y + +  L +  R +EA E++ +ML K   P  VT++
Sbjct: 617 DAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTFK 657



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 146/297 (49%), Gaps = 10/297 (3%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P V+    ++   C    L  A+++L  +   G   + VS+   + G C +G+  +A  +
Sbjct: 108 PAVIACNILIKKLCAHRRLADAERVLDALKESG-SADAVSHNTLVAGYCRDGRLADAERV 166

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +  ++      N +TY+ +++G  R G+L++A +++  M      P     N +++ LC 
Sbjct: 167 LEAAKVSG-AANVVTYTALINGYCRSGRLADALNLIASM---PVAPDTYTYNTVLKGLCG 222

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
             + + A++ M+E +   C  N V F + IR FCQ G L+ A+ LL+ M      PD V 
Sbjct: 223 AKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVI 282

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y+T+++  S+ GRV++A  L+  ML K   P  V Y   +   C   R +D+ +L+ +M+
Sbjct: 283 YSTLVNGFSEQGRVDDALVLLNTMLCK---PNTVCYNAALKGLCMAERWKDVGELIAEMV 339

Query: 577 SKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            K        ++ +   LC  G ++ A +++ ++ +   + D    + L+  +  +G
Sbjct: 340 RKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQG 396


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 240/508 (47%), Gaps = 27/508 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D  VY  ++         +  + +   M RR +      +S LM    R G+ R A  
Sbjct: 217 KADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASE 276

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M    V P+++        L    +   A++ L+ M   G  P  LTYN ++ G C
Sbjct: 277 MLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLC 336

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              R+ DA  +++ M  KG  PD V+Y T++  LC   +I E  DL + ++++   FH +
Sbjct: 337 KEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEK--FHVK 394

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
                              PDV T   ++ G C+ G +  A ++   M   G + N V+Y
Sbjct: 395 -------------------PDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTY 435

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              + G     K +EA ++   + E  ++PN++TYSV+++GL +   LS A  +  +M  
Sbjct: 436 NFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKD 495

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G  PT ++ N L+ SLCRE  ++ A+   QE  N    V+VV+F  +I G  + GD++ 
Sbjct: 496 SGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKS 555

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A  LL +M++    PD VT++ +I+  SK G ++EA  L  KM+S G VP VV + +++ 
Sbjct: 556 AKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLK 615

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTA--- 612
            Y   G  E ++ LL +M  K     +   + ++  LC      +  KIL K  + +   
Sbjct: 616 GYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQQSEHT 675

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVA 640
           SK     CH L+   LN   P L   VA
Sbjct: 676 SKGTTIKCHELLMR-LNNFHPELKLIVA 702



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 261/541 (48%), Gaps = 19/541 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA--AVAPNLLICNTA 217
           A  VL LM +RG        + ++  + R+G+   AM + S M++    V P+ +  NT 
Sbjct: 96  AFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTL 155

Query: 218 IHVLVVGNKLAKALRFLERMQLAG-ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
           ++      +LA+A    E M+  G   PN++TY+ LI  YC    + + + L++EM  +G
Sbjct: 156 VNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREG 215

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHDQGRI---EEAK 324
              D   Y +++   C E  I+  R+L ++M         V  S L    GR     EA 
Sbjct: 216 LKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREAS 275

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           E++  M+  G  PDVV YT + +G C+ G    A K+L  M   G +P T++Y   +NGL
Sbjct: 276 EMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGL 335

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C   +  +A  ++    ++   P+A+TY+ ++ GL   GK+ EA D+ + ++ + F   P
Sbjct: 336 CKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKP 395

Query: 445 --VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
                N LIQ LC+EG++  A +     +  G   N+V +  LI G+     L EAL L 
Sbjct: 396 DVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLW 455

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
                    P+++TY+ +I+ L K   +  A  L  KM   G+ PTV+ Y  ++   C+ 
Sbjct: 456 KYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCRE 515

Query: 563 GRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
             +E    L ++M  ++      ++N +I+     G ++ A ++L ++       DA T 
Sbjct: 516 DSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTF 575

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
            +L+  +   G+   A  +  +M +   +P + +   + +   L+G++E+  +L+ +  +
Sbjct: 576 SILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMAD 635

Query: 681 R 681
           +
Sbjct: 636 K 636



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 223/503 (44%), Gaps = 28/503 (5%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           A S L+    +A +    + V   M  A V P     +      V  +  + A   L  M
Sbjct: 44  ACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLM 103

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP--LKGCSPDKVSYYTVMGYLCKEK 295
              G   NV   N ++KG+C   +   A+ L  +M        PD V+Y T++   CK K
Sbjct: 104 TKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAK 163

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           R+ E R L E M    +                      C P++VTY+ +++ +C+ GE+
Sbjct: 164 RLAEARVLFEAMKKGGD----------------------CRPNLVTYSVLIDCYCKSGEV 201

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
            +   +L++M   G K +   Y++ ++  C  G     RE+ +       +PN +TYS +
Sbjct: 202 GEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCL 261

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           M GL R G+  EA +++++M  +G  P  V   +L   LC+ G+   A K +   + KG 
Sbjct: 262 MQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGE 321

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
               + +  ++ G C++  +++A  +++ M    K PD VTY T++  L   G++ EA +
Sbjct: 322 EPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMD 381

Query: 536 LMMKMLSKG--LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIEN 591
           L   +LS+   + P V T   +I   C+ GRV D  ++   M  +  Q     YN +IE 
Sbjct: 382 LWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEG 441

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
             +   L EA K+    + +    ++ T  V++       +  +A  + C+M +  + P 
Sbjct: 442 YLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPT 501

Query: 652 LKLCKKVSERLILEGKSEEADTL 674
           +     +   L  E   E+A +L
Sbjct: 502 VIDYNALMTSLCREDSLEQARSL 524



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 9/283 (3%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+    S ++  LR+  +      V  +MV     P    ++ L +S         A   
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM---YLCKKDPDTVTYTTIIDA 523
           +     +G  VNV N   +++GFC+ G  ++A+SL   M   Y C   PD VTY T+++ 
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVV-PDCVTYNTLVNG 158

Query: 524 LSKNGRVEEATELMMKMLSKG-LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
             K  R+ EA  L   M   G   P +VTY  +I  YC+ G V + L LLE+M  ++  +
Sbjct: 159 FCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEM-EREGLK 217

Query: 583 T---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                Y+ +I   C  G +E   ++  ++LR     +  T   L++     G    A ++
Sbjct: 218 ADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEM 277

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              M  R + PD+     +++ L   G++ +A  ++   V++G
Sbjct: 278 LKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKG 320


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 140/538 (26%), Positives = 259/538 (48%), Gaps = 66/538 (12%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA--YSRAGKLRNAMYVLSMMQK 204
           +LE LS       A+RV   M  R        FS  ++A  Y RAG+  +A+ VL  M +
Sbjct: 149 LLEALSAAGRMDLARRVFDAMPAR------NEFSSGILARGYCRAGRSADALAVLDAMPE 202

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
                NL++CNT +       ++ +A R ++RM+  G+ PNV+T+N  I   C   R+ +
Sbjct: 203 M----NLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLE 258

Query: 265 AIKLIDEMPL---KGCS-PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
           A ++ ++M     +G   PD+V++  ++   C                       D G +
Sbjct: 259 AYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFC-----------------------DAGMV 295

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           +EA  LV+ M   G +  V +Y   ++G  + G + +A+++L +M H G +PN+ +Y   
Sbjct: 296 DEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNII 355

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++GLC  GK+ + R + +       TP+ +TY+ ++H    +G  + A  ++ EM +KG 
Sbjct: 356 VDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGC 415

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P     N+L+QSL + G+    ++ ++    KG +++  +   +I G C+   LE A+ 
Sbjct: 416 APNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMD 475

Query: 501 LLDDMY----------------LCKKD-------PDTVTYTTIIDALSKNGRVEEATELM 537
           ++D M+                L           PD +TY+T+++AL K GR +EA + +
Sbjct: 476 IVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKL 535

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCS 594
           ++M+ K + P  V Y T IH YC  G+    +K+L  M  K+ C     +YN +I     
Sbjct: 536 VEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDM-EKRSCNPSTRSYNLLIWGFQE 594

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
               +E  K++ ++      ++  T + L++S+  +G+   A  +   M    ++P++
Sbjct: 595 KQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNV 652



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 217/470 (46%), Gaps = 60/470 (12%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA----AVAPNLLICN 215
           A+R++  M  +G+      F+  + A  +AG++  A  + + MQ+A       P+ +  +
Sbjct: 224 AERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFD 283

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             +        + +A   ++ M+  G    V +YN  + G     R+ +A +L+ EM  +
Sbjct: 284 VMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHE 343

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
           G  P+  +Y  ++  LCKE +  +VR                 R+E+         + G 
Sbjct: 344 GVQPNSYTYNIIVDGLCKEGKAFDVR-----------------RVED-------FVRSGV 379

Query: 336 I-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           + PDVVTYT++++ +C  G    A ++L +M   GC PN  +Y   L  L   G++ E  
Sbjct: 380 MTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVE 439

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM------------------- 435
            ++    E+ ++ +  + ++++ GL R  KL  A D+V  M                   
Sbjct: 440 RLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLV 499

Query: 436 ----VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
               + K   P  +  + L+ +LC+EG+ D AKK + E + K  + + V + + I G+C 
Sbjct: 500 SDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCM 559

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G    A+ +L DM     +P T +Y  +I    +  + +E  +LM +M  KG+   V+T
Sbjct: 560 HGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMT 619

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEA 601
           Y ++I  +C  G V   + LL++ML         N+++ N+ SFG L +A
Sbjct: 620 YNSLIKSFCGRGMVNKAMPLLDEMLQ--------NEIVPNVTSFGLLIKA 661



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 224/519 (43%), Gaps = 38/519 (7%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D + + +ML       +   A  ++ +M   G   + E+++  +    + G++  A  
Sbjct: 276 RPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQE 335

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +LS M    V PN    N  +  L    K     R  + ++   +TP+V+TY  L+  YC
Sbjct: 336 LLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYC 395

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VN 309
                  A +++DEM  KGC+P+  +Y  ++  L K  R  EV  L+E+M          
Sbjct: 396 SKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTA 455

Query: 310 DSNLFHD----QGRIEEAKELVNQMSQMG-----------------------CIPDVVTY 342
             N+  D      ++E A ++V+ M   G                       C+PD +TY
Sbjct: 456 SCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITY 515

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           + ++N  C+ G  D+AKK L +M      P++V Y  F++G C +GK+  A +++   E+
Sbjct: 516 STLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEK 575

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               P+  +Y++++ G + + K  E   ++ EM +KG     +  N LI+S C  G ++ 
Sbjct: 576 RSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNK 635

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A   + E L      NV +F  LI+ FC+  D   A  +  D+ L       V Y  +  
Sbjct: 636 AMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVF-DVALSTCGQKEVLYCLMCT 694

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC- 581
            LS   R  EA  ++   L   +      Y+ +I   C V   +    LL+  ++K    
Sbjct: 695 ELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSF 754

Query: 582 -RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
               +  VI+ L   G   +A  +  K++  A   D  +
Sbjct: 755 DPATFMPVIDALSESGKKHDADMLSEKMMEIADCNDGQS 793



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 153/356 (42%), Gaps = 14/356 (3%)

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  P    Y  ++    R   LD  + + + +   G  P+  +  A L  L   G+   A
Sbjct: 103 GAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLA 162

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
           R + +         N  +  ++  G  R G+ ++A  V+  M +       V  N ++  
Sbjct: 163 RRVFDAMPAR----NEFSSGILARGYCRAGRSADALAVLDAMPEMNL----VVCNTVVAG 214

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD-- 511
            CREG++D A++ +     +G A NVV F   I   C+ G + EA  + +DM    +   
Sbjct: 215 FCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGL 274

Query: 512 --PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             PD VT+  ++      G V+EAT L+  M   G +  V +Y   +    + GRV +  
Sbjct: 275 PRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQ 334

Query: 570 KLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           +LL +M  +  Q     YN +++ LC  G   +  ++   V       D  T   L+ +Y
Sbjct: 335 ELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAY 394

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
            +KG    A ++   M  +   P+L     + + L+  G++ E + L+ R  E+G+
Sbjct: 395 CSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGY 450


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 147/593 (24%), Positives = 267/593 (45%), Gaps = 56/593 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y  +L    K   C+ A R+L  M + GIE     ++ ++    +  +   A  +L
Sbjct: 263 NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLL 322

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++  + P+    NT IH      K+  A+    +M    + P+V TY  LI GYC  
Sbjct: 323 KRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRN 382

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R  +A +++ EM + G  P +++Y  ++   CK  ++    DL++ + + S        
Sbjct: 383 GRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMY 442

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               + F   G + +AK+++  M   G  PDV+TY+A++NG C++G + + K++L +M  
Sbjct: 443 TILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQK 502

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN V YT  +   C  G + EA +            N++ ++ ++    REG ++E
Sbjct: 503 SGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAE 562

Query: 428 A-----------------------------------CDVVREMVKKGFFPTPVEINLLIQ 452
           A                                     V   MV+ G+ P       L++
Sbjct: 563 AEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLR 622

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+ G +  AK+FM   L K CA++     +L+ G C+ G L+EAL L + M      P
Sbjct: 623 GLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILP 682

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           DT TYT ++D   K G+V  A  L+  ML KGLVP  + Y  +++     G+V+    + 
Sbjct: 683 DTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMF 742

Query: 573 EKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
           ++++ K+       AYN ++      G + E  +++  +        +++ ++L+  Y+ 
Sbjct: 743 QEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIK 802

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT-LMLRFVER 681
           KG       +   M    + PD      V+ RL++ G  E     + ++F+E+
Sbjct: 803 KGQLSRTLYLYRDMVKEGIKPD-----NVTYRLLIFGLCEYGLIEIAVKFLEK 850



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 152/611 (24%), Positives = 270/611 (44%), Gaps = 73/611 (11%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP---------------EAFS--YLMVA 185
           +Y M + IL + ++   A  VLR +A  G  C                   FS   L+ A
Sbjct: 110 IYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPTNLFSVDLLVNA 169

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK------------------- 226
           Y + GK+ +A   +  M +     +L  CN  ++ LV  NK                   
Sbjct: 170 YVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLD 229

Query: 227 ----------------LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
                           L+KA   L++M+   + PN +TYN ++  Y    R K A++++D
Sbjct: 230 VTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILD 288

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-------------FHDQ 317
           +M   G   D  +Y  ++  LCK KR      L+++M  + NL             F  +
Sbjct: 289 DMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRM-REVNLTPDECSYNTLIHGFFGE 347

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G+I  A  + NQM +    P V TYTA+++G+CR G  D+A+++L +M   G +P+ ++Y
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTY 407

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +A LNG C + K   A ++I        + N   Y++++ G  + G++S+A  +++ M+ 
Sbjct: 408 SALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLA 467

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G  P  +  + LI  +C+ G +   K+ +      G   N V +T+L+  FC+ G  +E
Sbjct: 468 DGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKE 527

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           AL    D+Y      ++V +  ++ +  + G + EA +    M    +   V ++  +I 
Sbjct: 528 ALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIID 587

Query: 558 RYCQVGRVEDLLKLLEKML----SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
            YCQ G V +   + + M+        C   Y  ++  LC  G+L +A + +  +L  A 
Sbjct: 588 SYCQRGNVLEAFSVYDNMVRHGWPPDIC--TYGSLLRGLCQGGHLVQAKEFMVYLLEKAC 645

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             D  T + L+      G    A  +  +M  RN++PD      + +     GK   A  
Sbjct: 646 AIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALI 705

Query: 674 LMLRFVERGHI 684
           L+   +E+G +
Sbjct: 706 LLQMMLEKGLV 716



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 147/620 (23%), Positives = 272/620 (43%), Gaps = 103/620 (16%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            D I Y  ++  + K  +    K +L  M + G+      ++ L+  + +AG  + A+   
Sbjct: 473  DVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYF 532

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
              + ++ +  N +I N  +        +A+A +F + M    I+ +V ++NC+I  YC  
Sbjct: 533  VDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQR 592

Query: 260  HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ-- 317
              + +A  + D M   G  PD  +Y +++  LC+   + + ++ M  ++  +    ++  
Sbjct: 593  GNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTL 652

Query: 318  ----------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                      G ++EA +L  +M     +PD  TYT +++GFC+ G++  A  +LQ M  
Sbjct: 653  NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLE 712

Query: 368  HGCKPNTVSYTAFLNGLCHNGKSLEA---------------------------------- 393
             G  P+T++YT  LNGL + G+   A                                  
Sbjct: 713  KGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQIN 772

Query: 394  ---REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
               R M N  E E + P++ +Y+++MHG  ++G+LS    + R+MVK+G  P  V   LL
Sbjct: 773  EIERLMRNMHENEVY-PSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLL 831

Query: 451  IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK----------------GD 494
            I  LC  G ++ A KF+++ + +G   + + F  LI+ F +K                GD
Sbjct: 832  IFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGD 891

Query: 495  LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
            ++ A  L +DM      P  V  ++I+  L K G+VEEA  +   ++  G+VPT+ T+ T
Sbjct: 892  IDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTT 951

Query: 555  VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
            ++H  C+  +++D   L + M S               C                    K
Sbjct: 952  LMHGLCKEFKIDDAFHLKQLMES---------------CGL------------------K 978

Query: 615  ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
             D  T +VL+    NK     A  +   M ++ L+P++     ++  +   G  ++ + L
Sbjct: 979  VDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKL 1038

Query: 675  MLRFVERGHI----QPKSEE 690
            +    +RG +     P+S E
Sbjct: 1039 LKDIEDRGIVPSYKHPESLE 1058



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/497 (22%), Positives = 224/497 (45%), Gaps = 28/497 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R   + Y  +L    K      A  +++ +  R I      ++ L+  + + G++  A  
Sbjct: 401 RPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQ 460

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M    + P+++  +  I+ +     + +    L RMQ +G+ PN + Y  L+  +C
Sbjct: 461 ILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFC 520

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
                K+A+K   ++   G   + V +  +   LC                     F+ +
Sbjct: 521 KAGHAKEALKYFVDIYRSGLVANSVIHNAL---LCS--------------------FYRE 557

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G I EA++    MS+M    DV ++  +++ +C+ G + +A  +   M  HG  P+  +Y
Sbjct: 558 GMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTY 617

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
            + L GLC  G  ++A+E +    E+    +  T + ++ G+ + G L EA D+  +MV 
Sbjct: 618 GSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 677

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +   P      +L+   C+ GK+  A   +Q  L KG   + + +T L+ G   +G ++ 
Sbjct: 678 RNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKA 737

Query: 498 ALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           A  +  ++ +CK+    D + Y ++++   K G++ E   LM  M    + P+  +Y  +
Sbjct: 738 ASYMFQEI-ICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNIL 796

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +H Y + G++   L L   M+ +  +     Y  +I  LC +G +E A K L K++    
Sbjct: 797 MHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGV 856

Query: 614 KADASTCHVLVESYLNK 630
             D     +L++++  K
Sbjct: 857 FPDNLAFDILIKAFSEK 873



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 125/551 (22%), Positives = 235/551 (42%), Gaps = 71/551 (12%)

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT---------------- 243
           S++Q++ +     I   A+H+LV     ++A+  L  + L G +                
Sbjct: 97  SIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCD 156

Query: 244 -PNVLTYNCLIKGYCDLHRIKD---AIKLIDEMPLKG----CSP---------------- 279
             N+ + + L+  Y    ++ D   AI  +DE   K     C+                 
Sbjct: 157 PTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWL 216

Query: 280 ------------DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-----------NLFHD 316
                       D  +   V+  LC + ++ +   +++KM N             N +  
Sbjct: 217 FLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYVK 276

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +GR + A  +++ M + G   D+ TY  +++  C++    +A  +L++M      P+  S
Sbjct: 277 KGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECS 336

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   ++G    GK   A  + N    +   P+  TY+ ++ G  R G+  EA  V+ EM 
Sbjct: 337 YNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQ 396

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
             G  P+ +  + L+   C+  K+  A   ++   ++  ++N   +T LI GFCQ G++ 
Sbjct: 397 ITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVS 456

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +A  +L  M     DPD +TY+ +I+ + K G + E  E++ +M   G++P  V Y T++
Sbjct: 457 KAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLV 516

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIEN--LCSF---GYLEEAGKILGKVLRT 611
             +C+ G  ++ LK    +    +     N VI N  LCSF   G + EA +    + R 
Sbjct: 517 FYFCKAGHAKEALKYFVDI---YRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRM 573

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
               D ++ + +++SY  +G  L A+ V   M      PD+     +   L   G   +A
Sbjct: 574 KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQA 633

Query: 672 DTLMLRFVERG 682
              M+  +E+ 
Sbjct: 634 KEFMVYLLEKA 644


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 232/484 (47%), Gaps = 27/484 (5%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y  ++ +L ++  C  A  V R M   G++   + +S LMVA  +       M +L  M+
Sbjct: 195 YNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEME 254

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
              + PN+      I VL    K+ +A     RM   G  P+++TY  LI   C+  +++
Sbjct: 255 DLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLE 314

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
           +A +L  +M   G  PD+V Y T                L++K       F+D G ++  
Sbjct: 315 NAKELFVKMKANGHKPDQVIYIT----------------LLDK-------FNDFGDLDTF 351

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
           KE  +QM   G +PDVVT+T +V+  C+  + D+A      M   G  PN  +Y   + G
Sbjct: 352 KEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICG 411

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           L   G+  +A ++++T E     P A TY   +    + G+  +A +   +M  KG  P 
Sbjct: 412 LLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPN 471

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V  N  + SL   G++  AK         G A + V +  +++ + + G ++EA++LL 
Sbjct: 472 IVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLS 531

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M     +PD +   ++ID+L K GRV+EA ++  +M    L PTVVTY T++    + G
Sbjct: 532 EMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEG 591

Query: 564 RVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           RV+  ++L E M+ K KC     ++N +++  C    +E A K+  K+     K D  T 
Sbjct: 592 RVQKAIELFESMIXK-KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTY 650

Query: 621 HVLV 624
           + ++
Sbjct: 651 NTVI 654



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 148/655 (22%), Positives = 276/655 (42%), Gaps = 91/655 (13%)

Query: 107 KPRQICAV-LRSQADERVALQFF--YWADRQWR-YRHDPIVYYMMLEILSKTKLCQGAKR 162
           KP Q+  + L  + ++   L  F  +W+  +   Y  D + + +++++L K +    A  
Sbjct: 329 KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFA 388

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
              +M ++GI      ++ L+    RAG++ +A+ +L  M+   V P      T I    
Sbjct: 389 TFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFG 448

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              +  KA+   E+M+  GI PN++  N  +    ++ R+++A  + + +   G +PD V
Sbjct: 449 KSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSV 508

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQM 330
           +Y  +M    K  ++ E  +L+ +M+ +             +  +  GR++EA ++ ++M
Sbjct: 509 TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
             M   P VVTY  +++G  + G + +A ++ + M    C PNT+S+   L+  C N + 
Sbjct: 569 KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEV 628

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             A +M +        P+ +TY+ V++GL +E K++ A     ++ KK   P  V I  L
Sbjct: 629 ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTL 687

Query: 451 IQSLCR------------------------------------EGKMDGAKKFMQECLNKG 474
           +  L +                                    E +MD A  F +E +  G
Sbjct: 688 LPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNG 747

Query: 475 CAVNVVNFTSLIRGFCQK------------------------------GDL------EEA 498
                     L+R  C+                               G+L      E+A
Sbjct: 748 ICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKA 807

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             L  DM      PD  T+  ++    K+G++ E  EL  +M+S+   P  +TY  VI  
Sbjct: 808 WDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISS 867

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
             +   ++  L     ++S     T   Y  +I+ L   G LEEA ++  ++     K +
Sbjct: 868 LAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPN 927

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
            +  ++L+  Y   G    A ++  RM N  + PDLK    + + L L G+ +EA
Sbjct: 928 CAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEA 982



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 195/411 (47%), Gaps = 17/411 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++++ L      + AK +   M   G +     +  L+  ++  G L       
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S M+     P+++     + VL       +A    + M+  GI PN+ TYN LI G    
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----------VN 309
            RI+DA+KL+D M   G  P   +Y T + Y  K     +  +  EKM            
Sbjct: 416 GRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVAC 475

Query: 310 DSNLFH--DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +++L+   + GR+ EAK + N + + G  PD VTY  ++  + +VG++D+A  +L +M  
Sbjct: 476 NASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR 535

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +GC+P+ +   + ++ L   G+  EA +M +  ++   +P  +TY+ ++ GL +EG++ +
Sbjct: 536 NGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQK 595

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A ++   M+ K   P  +  N L+   C+  +++ A K   +     C  +V+ + ++I 
Sbjct: 596 AIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIY 655

Query: 488 GFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATEL 536
           G  ++  +  A      +   KK   PD VT  T++  L K G++ +A  +
Sbjct: 656 GLIKENKVNHAFWFFHQL---KKSMHPDHVTICTLLPGLVKCGQIGDAISI 703



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 138/549 (25%), Positives = 239/549 (43%), Gaps = 26/549 (4%)

Query: 124  ALQFFYWADRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
            A Q F   DR    +  P V  Y  +L  L K    Q A  +   M  +  +C P   S+
Sbjct: 561  AWQMF---DRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXK--KCSPNTISF 615

Query: 182  --LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
              L+  + +  ++  A+ + S M      P++L  NT I+ L+  NK+  A  F  +++ 
Sbjct: 616  NTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK- 674

Query: 240  AGITPNVLTYNCLIKGYCDLHRIKDAIKLI-DEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
              + P+ +T   L+ G     +I DAI +  D M       ++  +  +MG    E  + 
Sbjct: 675  KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMD 734

Query: 299  EVRDLMEKMV------NDSNLFH------DQGRIEEAKELVNQMSQ-MGCIPDVVTYTAV 345
            +     E++V       DS L           R   A ++ ++ ++ +G  P + +Y  +
Sbjct: 735  KAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCL 794

Query: 346  VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
            +     V   ++A  + + M + GC P+  ++   L     +GK  E  E+         
Sbjct: 795  IGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRC 854

Query: 406  TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
             P+AITY++V+  L +   L +A D   ++V   F PTP     LI  L + G+++ A +
Sbjct: 855  KPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMR 914

Query: 466  FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
              +E  + GC  N   F  LI G+ + GD E A  L   M      PD  +YT ++D L 
Sbjct: 915  LFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLC 974

Query: 526  KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-- 583
              GRV+EA     ++ S GL P  + Y  +I+   +  R+E+ L L  +M ++       
Sbjct: 975  LAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLY 1034

Query: 584  AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
             YN ++ NL   G +E+A ++  ++     + D  T + L+  Y     P  AY V   M
Sbjct: 1035 TYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094

Query: 644  FNRNLIPDL 652
                  P++
Sbjct: 1095 MVDGCNPNI 1103



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/563 (21%), Positives = 243/563 (43%), Gaps = 52/563 (9%)

Query: 160  AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
            AK +   +   G+      ++ +M  YS+ G++  A+ +LS M +    P++++ N+ I 
Sbjct: 491  AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550

Query: 220  VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
             L    ++ +A +  +RM+   ++P V+TYN L+ G     R++ AI+L + M  K CSP
Sbjct: 551  SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSP 610

Query: 280  DKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----NDSNLFHD-------QGRIEEAKELV 327
            + +S+ T++   CK   ++    +  KM       D   ++        + ++  A    
Sbjct: 611  NTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFF 670

Query: 328  NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ-MYHHGCKPNTVSYTAFLNG--- 383
            +Q+ +    PD VT   ++ G  + G++  A  + +  MY    + N   +   + G   
Sbjct: 671  HQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLV 729

Query: 384  --------------------------------LCHNGKSLEAREMINT-SEEEWWTPNAI 410
                                            LC + + L A ++ +  +++   +P   
Sbjct: 730  EAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLA 789

Query: 411  TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            +Y+ ++  L       +A D+ ++M   G  P     N+L+    + GK+    +  +E 
Sbjct: 790  SYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEM 849

Query: 471  LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
            +++ C  + + +  +I    +  +L++AL    D+      P   TY  +ID L+K GR+
Sbjct: 850  ISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRL 909

Query: 531  EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQV 588
            EEA  L  +M   G  P    +  +I+ Y ++G  E   +L ++M+++  +    +Y  +
Sbjct: 910  EEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTIL 969

Query: 589  IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
            ++ LC  G ++EA     ++  T    D    + ++           A  +   M NR +
Sbjct: 970  VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029

Query: 649  IPDLKLCKKVSERLILEGKSEEA 671
            +PDL     +   L L G  E+A
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQA 1052



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 157/330 (47%), Gaps = 12/330 (3%)

Query: 203  QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            +K  ++P L   N  I  L+  +   KA    + M+  G  P+  T+N L+  +    +I
Sbjct: 780  KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKI 839

Query: 263  KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----------- 311
             +  +L  EM  + C PD ++Y  V+  L K   + +  D    +V+             
Sbjct: 840  TELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPL 899

Query: 312  -NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
             +     GR+EEA  L  +MS  GC P+   +  ++NG+ ++G+ + A ++ ++M + G 
Sbjct: 900  IDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959

Query: 371  KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            +P+  SYT  ++ LC  G+  EA    N  +     P+ I Y+ +++GL +  ++ EA  
Sbjct: 960  RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019

Query: 431  VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
            +  EM  +G  P     N L+ +L   G ++ AK+  +E    G   +V  + +LIRG+ 
Sbjct: 1020 LYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYS 1079

Query: 491  QKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
               + E A ++  +M +   +P+  TY  +
Sbjct: 1080 LSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 213/510 (41%), Gaps = 26/510 (5%)

Query: 165 RLMARRG-IECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           ++M  +G  E R      L V  S    +R   Y  S+ +   V      CN  +  L V
Sbjct: 75  QVMVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRV 134

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
            +K+       E MQ   I  ++ TY  + K       ++    ++++M   G   +  S
Sbjct: 135 HDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYS 194

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           Y  ++                       +L    G   EA E+  +M   G  P + TY+
Sbjct: 195 YNGLI-----------------------HLLIQSGFCGEALEVYRRMVSEGLKPSLKTYS 231

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
           A++    +  + +    +L++M   G +PN  ++T  +  L   GK  EA E+    ++E
Sbjct: 232 ALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDE 291

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+ +TY+V++  L   G+L  A ++  +M   G  P  V    L+      G +D  
Sbjct: 292 GCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTF 351

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           K+F  +    G   +VV FT L+   C+  D +EA +  D M      P+  TY T+I  
Sbjct: 352 KEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICG 411

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR- 582
           L + GR+E+A +L+  M S G+ PT  TY T I  + + G     ++  EKM +K     
Sbjct: 412 LLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPN 471

Query: 583 -TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
             A N  + +L   G L EA  +   +       D+ T +++++ Y   G    A  +  
Sbjct: 472 IVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLS 531

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
            M      PD+ +   + + L   G+ +EA
Sbjct: 532 EMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 152/324 (46%), Gaps = 12/324 (3%)

Query: 241  GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
            GI+P + +YNCLI    ++H  + A  L  +M   GC+PD  ++  ++    K  +I E+
Sbjct: 783  GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITEL 842

Query: 301  RDLMEKMVN-----DSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             +L ++M++     D+  ++           +++A +    +      P   TY  +++G
Sbjct: 843  FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDG 902

Query: 349  FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
              +VG L++A ++ ++M  +GCKPN   +   +NG    G +  A ++      E   P+
Sbjct: 903  LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962

Query: 409  AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
              +Y++++  L   G++ EA     E+   G  P  +  N +I  L +  +M+ A     
Sbjct: 963  LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYN 1022

Query: 469  ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
            E  N+G   ++  + SL+      G +E+A  + +++ L   +PD  TY  +I   S + 
Sbjct: 1023 EMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082

Query: 529  RVEEATELMMKMLSKGLVPTVVTY 552
              E A  +   M+  G  P + TY
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 158/376 (42%), Gaps = 5/376 (1%)

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
           HD  ++E+   +   M +     D+ TY  +       G L Q   +L +M   G   N 
Sbjct: 135 HD--KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNA 192

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            SY   ++ L  +G   EA E+      E   P+  TYS +M  L ++        +++E
Sbjct: 193 YSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKE 252

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M   G  P      + I+ L R GK+D A +  +   ++GC  ++V +T LI   C  G 
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           LE A  L   M      PD V Y T++D  +  G ++   E   +M + G +P VVT+  
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           ++   C+    ++     + M  +        YN +I  L   G +E+A K+L  +    
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVG 432

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
            +  A T    ++ +   G    A +   +M  + ++P++  C      L   G+  EA 
Sbjct: 433 VQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492

Query: 673 TLMLRFVERGHIQPKS 688
           T+     E G + P S
Sbjct: 493 TMFNGLRENG-LAPDS 507



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 112/261 (42%), Gaps = 28/261 (10%)

Query: 124  ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSY 181
            AL FFY       +R  P  Y  +++ L+K    + A R+   M+  G  C+P    F+ 
Sbjct: 877  ALDFFYDLVSS-DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYG--CKPNCAIFNI 933

Query: 182  LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
            L+  Y + G    A  +   M    + P+L      +  L +  ++ +AL +   ++  G
Sbjct: 934  LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993

Query: 242  ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
            + P+ + YN +I G     R+++A+ L +EM  +G  PD  +Y ++M  L          
Sbjct: 994  LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGL-------- 1045

Query: 302  DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                            G +E+AK +  ++   G  PDV TY A++ G+      + A  +
Sbjct: 1046 ---------------AGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTV 1090

Query: 362  LQQMYHHGCKPNTVSYTAFLN 382
             + M   GC PN  +Y    N
Sbjct: 1091 YKNMMVDGCNPNIGTYAQLPN 1111


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 239/505 (47%), Gaps = 25/505 (4%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L  L K    Q A  + R M   GI      F+ L+  +S+ G    +  V + + K  
Sbjct: 62  ILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKG 121

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
             PN +   T I  L +  ++ +AL F +++   G   N + Y  LI G C + +   A+
Sbjct: 122 YEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAAL 181

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKEL 326
           +L+  +  K   P+ V Y T++  +CK K + E  DL  +MV+                 
Sbjct: 182 QLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK---------------- 225

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
                  G  PDVVTY+A+++GFC +G+L+ A  +  +M      P+  +++  ++G C 
Sbjct: 226 -------GISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCK 278

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G+  EA+ ++    ++   P+ +TY  +M G     ++++A  +   M + G       
Sbjct: 279 EGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQS 338

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            N++I   C+  K+D A    +E   K    +VV + SLI G C+ G +  AL L+D+M+
Sbjct: 339 YNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMH 398

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                 D +TY +I+DAL KN +V++A  L+ KM  +G+ P + TY  +I   C+ GR++
Sbjct: 399 DRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLK 458

Query: 567 DLLKLLEKMLSKQKCRTAYNQ--VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           D   + E +L K    T Y    +I+  C     ++A  +L K+       +A T  +++
Sbjct: 459 DAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLI 649
            S   K    +A K+   M  R L+
Sbjct: 519 LSLFEKDENDMAEKLLREMIARGLL 543



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 210/436 (48%), Gaps = 23/436 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + + +++   S+      +  V   + ++G E      + L+      G++  A++  
Sbjct: 90  DLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFH 149

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +       N +   T I+ L    + + AL+ L R+    + PNV+ YN +I   C +
Sbjct: 150 DKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKV 209

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             + +A  L  EM  KG SPD V+Y  ++   C   ++ +   L  KM++          
Sbjct: 210 KLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMIS---------- 259

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                E +N        PDV T++ +V+GFC+ G + +AK +L  M   G KP+ V+Y +
Sbjct: 260 -----EEIN--------PDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCS 306

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G C   +  +A+ + NT  +   T N  +Y+++++G  +  K+ EA ++ +EM  K 
Sbjct: 307 LMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKN 366

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  V  N LI  LC+ GK+  A K + E  ++G   + + + S++   C+   +++A+
Sbjct: 367 IIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAI 426

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
           +LL  M      PD  TYT +ID L K GR+++A  +   +L KG   TV TY  +I  +
Sbjct: 427 ALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGF 486

Query: 560 CQVGRVEDLLKLLEKM 575
           C     +  L LL KM
Sbjct: 487 CDNDLFDKALALLSKM 502



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 204/410 (49%), Gaps = 23/410 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  + + Y  ++  L K      A ++LR +  + ++     ++ ++ +  +   +  A 
Sbjct: 157 FHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAF 216

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            + S M    ++P+++  +  I    +  KL  A+    +M    I P+V T++ L+ G+
Sbjct: 217 DLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGF 276

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   R+K+A  ++  M  +G  PD V+Y ++M   C  K                     
Sbjct: 277 CKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVK--------------------- 315

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
             ++ +AK + N M+Q G   +V +Y  ++NGFC++ ++D+A  + ++M+     P+ V+
Sbjct: 316 --QVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVT 373

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y + ++GLC +GK   A ++++   +     + ITY+ ++  L +  ++ +A  ++ +M 
Sbjct: 374 YNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 433

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            +G  P      +LI  LC+ G++  A+   ++ L KG  + V  +T +I+GFC     +
Sbjct: 434 DEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFD 493

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           +AL+LL  M      P+  TY  II +L +    + A +L+ +M+++GL+
Sbjct: 494 KALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/448 (22%), Positives = 204/448 (45%), Gaps = 35/448 (7%)

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
           TP +  +  ++     ++  + AI L  EM   G + D V++  ++              
Sbjct: 53  TPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILI-------------- 98

Query: 303 LMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                    N F   G    +  +   + + G  P+ +T T ++ G C  G++ QA    
Sbjct: 99  ---------NCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFH 149

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            ++   G   N V Y   +NGLC  G++  A +++   + +   PN + Y+ ++  + + 
Sbjct: 150 DKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKV 209

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
             ++EA D+  EMV KG  P  V  + LI   C  GK++ A     + +++    +V  F
Sbjct: 210 KLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTF 269

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           + L+ GFC++G ++EA ++L  M      PD VTY +++D      +V +A  +   M  
Sbjct: 270 SILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQ 329

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEE 600
            G+   V +Y  +I+ +C++ +V++ + L ++M  K        YN +I+ LC  G +  
Sbjct: 330 GGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISY 389

Query: 601 AGKILGKVLRTASKADASTCHVLVESY-----LNKGIPLLAYKVACRMFNRNLIPDLKLC 655
           A K++ ++       D  T + ++++      ++K I LL      +M +  + PD+   
Sbjct: 390 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLT-----KMKDEGIQPDMYTY 444

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGH 683
             + + L   G+ ++A  +    + +G+
Sbjct: 445 TILIDGLCKGGRLKDAQNIFEDLLVKGY 472



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/358 (21%), Positives = 161/358 (44%), Gaps = 4/358 (1%)

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           N++  +   P +  +  ++    ++     A  + ++M  +G   + V++   +N     
Sbjct: 45  NRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQL 104

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G +  +  +     ++ + PNAIT + ++ GL  +G++ +A     ++V  GF    V  
Sbjct: 105 GHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCY 164

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             LI  LC+ G+   A + ++    K    NVV + ++I   C+   + EA  L  +M  
Sbjct: 165 GTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS 224

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD VTY+ +I      G++ +A  L  KM+S+ + P V T+  ++  +C+ GRV++
Sbjct: 225 KGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKE 284

Query: 568 LLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
              +L  M+ KQ  +     Y  +++  C    + +A  I   + +    A+  + ++++
Sbjct: 285 AKNVLAMMM-KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             +        A  +   M  +N+IPD+     + + L   GK   A  L+    +RG
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 243/499 (48%), Gaps = 21/499 (4%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           + A  +L    R+G  C P   SY  ++    R G++  A+     M+K A+ PNL   N
Sbjct: 357 EDAYSLLERQRRKG--CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYN 413

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             I +L    KL  AL   + M+ AG+ PNV+T N ++   C   R+ DA  + + +  K
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEA 323
            C PD V+Y +++  L +  R+ E   L E+M++ + +            F   GR E+ 
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
            ++ N+M ++GC PD++     ++   + GE+++ + + Q++ + G  P+  SYT  ++G
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHG 593

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           L   G + EA E+  T +E+    +   Y+ V+ G  + GK+++A  ++ EM  KG  PT
Sbjct: 594 LVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPT 653

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V    +I  L +  ++D A    +E  +KG  +NVV ++SLI GF + G ++EA  +++
Sbjct: 654 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIME 713

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           ++      P+  T+  ++DAL K   + EA      M      P  +TY  +IH  C++ 
Sbjct: 714 ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR 773

Query: 564 RVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           +        ++M  KQ  +     Y  +I  L   G + EA  +  K       AD++  
Sbjct: 774 KFNKAFVFWQEM-QKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIY 832

Query: 621 HVLVESYLNKGIPLLAYKV 639
           + ++E   N      AY++
Sbjct: 833 NAIIEGLSNANRASDAYRL 851



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 160/631 (25%), Positives = 280/631 (44%), Gaps = 69/631 (10%)

Query: 70  EDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFY 129
           ++E +  ++  VC+++E    W   +E  L  L  +  P  +  VLR   D   A+ +F 
Sbjct: 60  KNENKRQVIDSVCQILE-TGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFR 118

Query: 130 WADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRG---------------IEC 174
           WA+R     H    Y  +L ++++T+     +++L  M+  G               I+ 
Sbjct: 119 WAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS 178

Query: 175 RP--EAFSYLMV--------AYSRAGKLRNA----------MYVLSMMQKAAVAPNLLIC 214
           R   EAF+++          A+S    L  A          + +   MQ+   A N+ + 
Sbjct: 179 RKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLF 238

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
            T I V     ++  AL  L+ M+   + P+V+ YN  I  +    ++  A K   EM  
Sbjct: 239 TTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKA 298

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEE 322
            G   D V+Y +++G LCK  R+ E  +L E M  +  +            +   G+ E+
Sbjct: 299 NGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFED 358

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A  L+ +  + GCIP VV+Y  +++   R G++D+A K  ++M      PN  +Y   ++
Sbjct: 359 AYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMID 417

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
            LC  GK   A  + +  ++    PN IT ++++  L +  +L +AC +   +  K   P
Sbjct: 418 MLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRP 477

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V    LI+ L R G++D A K  ++ L+     N V +TSLIR F + G  E+   + 
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIY 537

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           ++M      PD +   T +D + K G +E+   L  ++ + G +P   +Y  +IH   + 
Sbjct: 538 NEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKA 597

Query: 563 GRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKIL-------------- 605
           G   +  +L   M  +Q C     AYN VI+  C  G + +A ++L              
Sbjct: 598 GFAHEAYELFYTM-KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVT 656

Query: 606 -GKVLRTASKAD-ASTCHVLVESYLNKGIPL 634
            G V+   +K D     ++L E   +KGI L
Sbjct: 657 YGSVIDGLAKIDRLDEAYMLFEEAKSKGIEL 687



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 145/635 (22%), Positives = 275/635 (43%), Gaps = 83/635 (13%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R+ ++R     Y  ++  LS ++       + + M   G       F+ L+  ++R G++
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 193 RNAMYVLSMMQKAAVAPNLLICN-----------------------------------TA 217
             A+ +L  M+  ++ P++++ N                                   + 
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I VL   ++L +A+   E M      P    YN +I GY    + +DA  L++    KGC
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------NLFHD----QGRIEEAKEL 326
            P  VSY  ++  L ++ ++ E     E+M  D+       N+  D     G++E A  +
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVV 431

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
            + M   G  P+V+T   +V+  C+   LD A  + + + H  C+P+ V+Y + + GL  
Sbjct: 432 RDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGR 491

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
           +G+  EA ++     +    PNA+ Y+ ++    + G+  +   +  EM++ G  P  + 
Sbjct: 492 HGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLL 551

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +N  +  + + G+++  +   QE  N G   +  ++T LI G  + G   EA  L   M 
Sbjct: 552 LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                 DT  Y T+ID   K+G+V +A +L+ +M +KG  PTVVTY +VI    ++ R++
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLD 671

Query: 567 DLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           +   L E+  SK  +     Y+ +I+     G ++EA  I+ ++++     +  T + L+
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731

Query: 625 ESYLN-----------------KGIP-LLAYKV------ACRMFNRNLI----------- 649
           ++ +                  K  P  + Y +        R FN+  +           
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFK 791

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           P++     +   L   G   EADTL  +F E+G +
Sbjct: 792 PNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGV 826



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 228/489 (46%), Gaps = 19/489 (3%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y +M+++L K    + A  V   M   G+       + ++    +A +L +A  +   +
Sbjct: 411 TYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
                 P+ +   + I  L    ++ +A +  E+M  A   PN + Y  LI+ +    R 
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRK 530

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSN----L 313
           +D  K+ +EM   GCSPD +   T M  + K   I++ R L +++ N     D+     L
Sbjct: 531 EDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTIL 590

Query: 314 FHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            H     G   EA EL   M + GC+ D   Y  V++GFC+ G++++A ++L++M   G 
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH 650

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P  V+Y + ++GL    +  EA  +   ++ +    N + YS ++ G  + G++ EA  
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYL 710

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           ++ E+++KG  P     N L+ +L +  ++  A    Q   +  C  N + ++ LI G C
Sbjct: 711 IMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLC 770

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +     +A     +M      P+  TYTT+I  L+K G + EA  L  K   KG V    
Sbjct: 771 KIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSA 830

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQ----VIENLCSFGYLEEAGKILG 606
            Y  +I       R  D  +L E+  ++ K  + Y +    ++++L     +E+A  I+G
Sbjct: 831 IYNAIIEGLSNANRASDAYRLFEE--ARLKGCSIYTKTCVVLLDSLHKAECIEQAA-IVG 887

Query: 607 KVLRTASKA 615
            VLR  +KA
Sbjct: 888 AVLRETAKA 896



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 108/263 (41%), Gaps = 26/263 (9%)

Query: 139 HDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           H+P V  Y  +++ L+K      A  +      +GIE     +S L+  + + G++  A 
Sbjct: 650 HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAY 709

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            ++  + +  + PN+   N  +  LV   ++++AL   + M+    TPN +TY+ LI G 
Sbjct: 710 LIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGL 769

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C + +   A     EM  +G  P+  +Y T++  L K                       
Sbjct: 770 CKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAK----------------------- 806

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            G I EA  L  +  + G + D   Y A++ G         A ++ ++    GC   T +
Sbjct: 807 AGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKT 866

Query: 377 YTAFLNGLCHNGKSLEAREMINT 399
               L+ L H  + +E   ++  
Sbjct: 867 CVVLLDSL-HKAECIEQAAIVGA 888



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/301 (19%), Positives = 128/301 (42%), Gaps = 26/301 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  +++   K+     A ++L  M  +G E     +  ++   ++  +L  A  + 
Sbjct: 618 DTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLF 677

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
              +   +  N++I ++ I       ++ +A   +E +   G+TPNV T+NCL+      
Sbjct: 678 EEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 737

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             I +A+     M    C+P+ ++Y  ++  LCK ++            N + +F     
Sbjct: 738 EEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF-----------NKAFVFW---- 782

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                    +M + G  P+V TYT +++G  + G + +A  + ++    G   ++  Y A
Sbjct: 783 --------QEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNA 834

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC---DVVREMV 436
            + GL +  ++ +A  +   +  +  +    T  V++  L +   + +A     V+RE  
Sbjct: 835 IIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETA 894

Query: 437 K 437
           K
Sbjct: 895 K 895


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 243/499 (48%), Gaps = 21/499 (4%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           + A  +L    R+G  C P   SY  ++    R G++  A+     M+K A+ PNL   N
Sbjct: 357 EDAYSLLERQRRKG--CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYN 413

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             I +L    KL  AL   + M+ AG+ PNV+T N ++   C   R+ DA  + + +  K
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEA 323
            C PD V+Y +++  L +  R+ E   L E+M++ + +            F   GR E+ 
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
            ++ N+M ++GC PD++     ++   + GE+++ + + Q++ + G  P+  SYT  ++G
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHG 593

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           L   G + EA E+  T +E+    +   Y+ V+ G  + GK+++A  ++ EM  KG  PT
Sbjct: 594 LVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPT 653

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V    +I  L +  ++D A    +E  +KG  +NVV ++SLI GF + G ++EA  +++
Sbjct: 654 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIME 713

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           ++      P+  T+  ++DAL K   + EA      M      P  +TY  +IH  C++ 
Sbjct: 714 ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR 773

Query: 564 RVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           +        ++M  KQ  +     Y  +I  L   G + EA  +  K       AD++  
Sbjct: 774 KFNKAFVFWQEM-QKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIY 832

Query: 621 HVLVESYLNKGIPLLAYKV 639
           + ++E   N      AY++
Sbjct: 833 NAIIEGLSNANRASDAYRL 851



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 160/631 (25%), Positives = 280/631 (44%), Gaps = 69/631 (10%)

Query: 70  EDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFY 129
           ++E +  ++  VC+++E    W   +E  L  L  +  P  +  VLR   D   A+ +F 
Sbjct: 60  KNENKRQVIDSVCQILE-TGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFR 118

Query: 130 WADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRG---------------IEC 174
           WA+R     H    Y  +L ++++T+     +++L  M+  G               I+ 
Sbjct: 119 WAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKS 178

Query: 175 RP--EAFSYLMV--------AYSRAGKLRNA----------MYVLSMMQKAAVAPNLLIC 214
           R   EAF+++          A+S    L  A          + +   MQ+   A N+ + 
Sbjct: 179 RKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLF 238

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
            T I V     ++  AL  L+ M+   + P+V+ YN  I  +    ++  A K   EM  
Sbjct: 239 TTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKA 298

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEE 322
            G   D V+Y +++G LCK  R+ E  +L E M  +  +            +   G+ E+
Sbjct: 299 NGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFED 358

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A  L+ +  + GCIP VV+Y  +++   R G++D+A K  ++M      PN  +Y   ++
Sbjct: 359 AYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMID 417

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
            LC  GK   A  + +  ++    PN IT ++++  L +  +L +AC +   +  K   P
Sbjct: 418 MLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRP 477

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V    LI+ L R G++D A K  ++ L+     N V +TSLIR F + G  E+   + 
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIY 537

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           ++M      PD +   T +D + K G +E+   L  ++ + G +P   +Y  +IH   + 
Sbjct: 538 NEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKA 597

Query: 563 GRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKIL-------------- 605
           G   +  +L   M  +Q C     AYN VI+  C  G + +A ++L              
Sbjct: 598 GFAHEAYELFYTM-KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVT 656

Query: 606 -GKVLRTASKAD-ASTCHVLVESYLNKGIPL 634
            G V+   +K D     ++L E   +KGI L
Sbjct: 657 YGSVIDGLAKIDRLDEAYMLFEEAKSKGIEL 687



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 144/635 (22%), Positives = 273/635 (42%), Gaps = 83/635 (13%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R+ ++R     Y  ++  LS ++       + + M   G       F+ L+  ++R G++
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT--------- 243
             A+ +L  M+  ++ P++++ N  I       K+  A +F   M+  G+          
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 244 --------------------------PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
                                     P    YN +I GY    + +DA  L++    KGC
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------NLFHD----QGRIEEAKEL 326
            P  VSY  ++  L ++ ++ E     E+M  D+       N+  D     G++E A  +
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVV 431

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
            + M   G  P+V+T   +V+  C+   LD A  + + + H  C+P+ V+Y + + GL  
Sbjct: 432 RDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGR 491

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
           +G+  EA ++     +    PNA+ Y+ ++    + G+  +   +  EM++ G  P  + 
Sbjct: 492 HGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLL 551

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +N  +  + + G+++  +   QE  N G   +  ++T LI G  + G   EA  L   M 
Sbjct: 552 LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                 DT  Y T+ID   K+G+V +A +L+ +M +KG  PTVVTY +VI    ++ R++
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLD 671

Query: 567 DLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           +   L E+  SK  +     Y+ +I+     G ++EA  I+ ++++     +  T + L+
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731

Query: 625 ESYLN-----------------KGIP-LLAYKV------ACRMFNRNLI----------- 649
           ++ +                  K  P  + Y +        R FN+  +           
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFK 791

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           P++     +   L   G   EADTL  +F E+G +
Sbjct: 792 PNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGV 826



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 228/489 (46%), Gaps = 19/489 (3%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y +M+++L K    + A  V   M   G+       + ++    +A +L +A  +   +
Sbjct: 411 TYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
                 P+ +   + I  L    ++ +A +  E+M  A   PN + Y  LI+ +    R 
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRK 530

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSN----L 313
           +D  K+ +EM   GCSPD +   T M  + K   I++ R L +++ N     D+     L
Sbjct: 531 EDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTIL 590

Query: 314 FHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            H     G   EA EL   M + GC+ D   Y  V++GFC+ G++++A ++L++M   G 
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH 650

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P  V+Y + ++GL    +  EA  +   ++ +    N + YS ++ G  + G++ EA  
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYL 710

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           ++ E+++KG  P     N L+ +L +  ++  A    Q   +  C  N + ++ LI G C
Sbjct: 711 IMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLC 770

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +     +A     +M      P+  TYTT+I  L+K G + EA  L  K   KG V    
Sbjct: 771 KIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSA 830

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQ----VIENLCSFGYLEEAGKILG 606
            Y  +I       R  D  +L E+  ++ K  + Y +    ++++L     +E+A  I+G
Sbjct: 831 IYNAIIEGLSNANRASDAYRLFEE--ARLKGCSIYTKTCVVLLDSLHKAECIEQAA-IVG 887

Query: 607 KVLRTASKA 615
            VLR  +KA
Sbjct: 888 AVLRETAKA 896



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 108/263 (41%), Gaps = 26/263 (9%)

Query: 139 HDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           H+P V  Y  +++ L+K      A  +      +GIE     +S L+  + + G++  A 
Sbjct: 650 HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAY 709

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            ++  + +  + PN+   N  +  LV   ++++AL   + M+    TPN +TY+ LI G 
Sbjct: 710 LIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGL 769

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C + +   A     EM  +G  P+  +Y T++  L K                       
Sbjct: 770 CKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAK----------------------- 806

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            G I EA  L  +  + G + D   Y A++ G         A ++ ++    GC   T +
Sbjct: 807 AGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKT 866

Query: 377 YTAFLNGLCHNGKSLEAREMINT 399
               L+ L H  + +E   ++  
Sbjct: 867 CVVLLDSL-HKAECIEQAAIVGA 888



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/301 (19%), Positives = 128/301 (42%), Gaps = 26/301 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  +++   K+     A ++L  M  +G E     +  ++   ++  +L  A  + 
Sbjct: 618 DTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLF 677

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
              +   +  N++I ++ I       ++ +A   +E +   G+TPNV T+NCL+      
Sbjct: 678 EEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 737

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             I +A+     M    C+P+ ++Y  ++  LCK ++            N + +F     
Sbjct: 738 EEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF-----------NKAFVFW---- 782

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                    +M + G  P+V TYT +++G  + G + +A  + ++    G   ++  Y A
Sbjct: 783 --------QEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNA 834

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC---DVVREMV 436
            + GL +  ++ +A  +   +  +  +    T  V++  L +   + +A     V+RE  
Sbjct: 835 IIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETA 894

Query: 437 K 437
           K
Sbjct: 895 K 895


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 145/570 (25%), Positives = 265/570 (46%), Gaps = 21/570 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++  L K++    AK +L  M+   ++     ++ L+  + R G    A  ++
Sbjct: 291 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMI 350

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M  A V PN +  +  +  L    ++ +A   L++M      P+ +TYN +I+G+   
Sbjct: 351 KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRH 410

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH- 315
           H  KDA +L+ EM   G SP+  +Y  ++  LC+    ++  DL+E+M       N F  
Sbjct: 411 HSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 470

Query: 316 --------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +G +  A E+ ++M+++  +PD+  Y +++ G  +VG ++++ K   QM  
Sbjct: 471 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 530

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN  +Y+  ++G   NG    A +++    +    PN + Y  ++    +   + +
Sbjct: 531 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 590

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
                + M+ +G         +LI +L   G M+ A + +      G   +V  ++SLI 
Sbjct: 591 VSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLIS 650

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C+  D E+A  +LD+M     DP+ V Y  +ID L K+G +  A  +   +L+KGLVP
Sbjct: 651 GLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP 710

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKIL 605
             VTY ++I   C+VG + +   L  +ML+      A  Y+ +     S G LE+A  ++
Sbjct: 711 NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLI 770

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            ++      A  S+ + LV+ +  +G      K+   +  R L+P+    + +   L   
Sbjct: 771 EEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEA 829

Query: 666 GKSEEADTLMLRFVERGHIQPKSEEHLQRQ 695
           GK  E  T+   FVE   +Q K+ E   R 
Sbjct: 830 GKLSEVHTI---FVE---LQQKTSESAARH 853



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/612 (24%), Positives = 273/612 (44%), Gaps = 68/612 (11%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +VY  +++   +      A ++++ M   G++     +  L+    + G++  A  +L  
Sbjct: 328 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 387

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M + +  P+ +  N  I      +    A R L  M+ AGI+PNV TY+ +I G C    
Sbjct: 388 MVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 447

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN----------DS 311
            + A  L++EM  KG  P+   Y  ++   C+E  +    ++ +KM            +S
Sbjct: 448 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNS 507

Query: 312 NLF--HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
            +F     GR+EE+ +   QM + G +P+  TY+ +++G+ + G+L+ A++++Q+M   G
Sbjct: 508 LIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 567

Query: 370 CKPNTVSYTAFLNG-------------------------------LCHN----GKSLEAR 394
            KPN V Y   L                                 L HN    G    A 
Sbjct: 568 LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAF 627

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            +++  E+    P+   YS ++ GL +     +A  ++ EM KKG  P  V  N LI  L
Sbjct: 628 RVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 687

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G +  A+      L KG   N V +TSLI G C+ GD+  A  L ++M      PD 
Sbjct: 688 CKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDA 747

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
             Y+ +    S  G +E+A  L+ +M  +G   ++ ++  ++  +C+ G++++ LKLL  
Sbjct: 748 FVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHV 806

Query: 575 MLSKQKCRTAYN--QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG- 631
           ++ +     A     +I  L   G L E   I  ++ +  S++ A     L    +N+G 
Sbjct: 807 IMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 866

Query: 632 IPLLAY----KVACRMFNRN---LIPDLKLCKK----------VSERLILEGKSEEADTL 674
           IPL       +  C+  N +   ++ D+ + K           + + L  +GK  EA  L
Sbjct: 867 IPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNL 926

Query: 675 MLRFVERGHIQP 686
           +    +RG++QP
Sbjct: 927 LKEMDKRGNLQP 938



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/560 (25%), Positives = 245/560 (43%), Gaps = 16/560 (2%)

Query: 148 LEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV 207
           LE   K +    AK+VL  M  RG       ++ L+    R+G +  A      M+   +
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
            P+       I+ L    +  +A   L+ M  A + PNV+ Y  LI G+       +A K
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NL-----F 314
           +I EM   G  P+K++Y  ++  LCK  ++     L+++MV DS        NL     F
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
               + ++A  L+++M   G  P+V TY+ +++G C+ GE ++A  +L++M   G KPN 
Sbjct: 409 RHHSK-KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 467

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
             Y   ++G C  G    A E+ +   +    P+   Y+ ++ GL + G++ E+     +
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M ++G  P     + LI    + G ++ A++ +Q  L+ G   N V +  L+  + +  D
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 587

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           +E+  S    M       D   Y  +I  LS +G +E A  ++  +   G VP V  Y +
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 647

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I   C+    E    +L++M  K        YN +I+ LC  G +  A  +   +L   
Sbjct: 648 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 707

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
              +  T   L++     G    A+ +   M    + PD  +   ++      G  E+A 
Sbjct: 708 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 767

Query: 673 TLMLRFVERGHIQPKSEEHL 692
            L+     RGH    S  +L
Sbjct: 768 FLIEEMFLRGHASISSFNNL 787



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 161/343 (46%), Gaps = 2/343 (0%)

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           + + +  +C+V E D AKK+L +M   GC  NTV+Y   + GLC +G   EA       E
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           +    P+  TY  +++GL +  + +EA  ++ EM      P  V    LI    REG  D
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A K ++E +  G   N + + +L+RG C+ G ++ A  LL  M      PDT+TY  II
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           +   ++   ++A  L+ +M + G+ P V TY  +IH  CQ G  E    LLE+M +K   
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 582 RTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
             A  Y  +I   C  G +  A +I  K+ +     D    + L+      G    + K 
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             +M  R L+P+      +    +  G  E A+ L+ R ++ G
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 567


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/577 (25%), Positives = 262/577 (45%), Gaps = 51/577 (8%)

Query: 78  VREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRY 137
           V +VCR+++    W   LE  L       +P  +  V+R   D RVAL +F W +R+ + 
Sbjct: 70  VHDVCRVLD-TYPWGAALEDALNTFDEMPQPELVVGVIRRLKDVRVALHYFRWVERKTKQ 128

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
            H P  Y  +L ++++T+  +  +++L  M+  G          ++ ++ ++ KLR A  
Sbjct: 129 LHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFG 188

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V+  M+K    P      T I  L   ++    L  L +MQ  G    V  +  LI  + 
Sbjct: 189 VIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFA 248

Query: 258 DLHRIKDAIKLIDEM-----------------------------------PLKGCSPDKV 282
              R+  A+ L+DEM                                     +G  PD V
Sbjct: 249 REGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDV 308

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQM 330
           ++ +++G LCK +R+ E  +L E++ ++ ++            +   G+  EA  L+ + 
Sbjct: 309 TFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQ 368

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            + GCIP V+ Y  ++    R G++++A ++L+ M      PN  SY   ++ LC  G+ 
Sbjct: 369 KRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGEL 427

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             A ++ ++ +E    PN IT ++++  L +  +L EAC +   +  K   P  V    L
Sbjct: 428 EAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSL 487

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I  L R GK++ A    ++ L+ G   N V +TSLIR F + G  E+   +  +M     
Sbjct: 488 IDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGC 547

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            PD +     +D + K G +E+   L  ++ ++GL P V +Y  +IH   + G  +D  K
Sbjct: 548 SPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYK 607

Query: 571 LLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
           L  +M  +       AYN VI+  C  G + +A ++L
Sbjct: 608 LFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLL 644



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/545 (23%), Positives = 248/545 (45%), Gaps = 28/545 (5%)

Query: 132 DRQWRYRH---------DPIVYYMMLEILSKTKLCQGAKRVLR-LMARRGIECRPEAFSY 181
           D  W++ H         D + +  M+ +L K +    A  +   L + + + C   A++ 
Sbjct: 289 DMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPC-VYAYNT 347

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           +++ Y   GK   A  +L   ++    P+++  N  +  L    K+ +ALR LE M++  
Sbjct: 348 MIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA 407

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             PN+ +YN LI   C    ++ A+K+ D M   G  P+ ++   ++  LCK +R+ E  
Sbjct: 408 -APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEAC 466

Query: 302 DLMEKM-----VNDSNLF-------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            +   +       DS  F          G++ +A  L  +M   G  P+ V YT+++  F
Sbjct: 467 SIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNF 526

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
            + G  +   K+ ++M H GC P+ +    +++ +   G+  + R +    + +  TP+ 
Sbjct: 527 FKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDV 586

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            +YS+++HGL + G   +   +  EM ++G        N++I   C+ GK++ A + ++E
Sbjct: 587 RSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEE 646

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              KG    VV + S+I G  +   L+EA  L ++      D + V Y+++ID   K GR
Sbjct: 647 MKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGR 706

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYN 586
           ++EA  ++ +++ KGL P   T+  ++    +   +++ L   + M    KC      Y+
Sbjct: 707 IDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNM-KNLKCPPNEVTYS 765

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            ++  LC      +A     ++ +   K +  T   ++      G  L A  +  R  + 
Sbjct: 766 IMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSS 825

Query: 647 NLIPD 651
             IPD
Sbjct: 826 GGIPD 830



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 141/543 (25%), Positives = 243/543 (44%), Gaps = 61/543 (11%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYS 187
           +RQ R    P  I Y  +L  L +    + A R+L  M    ++  P   SY  L+    
Sbjct: 366 ERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK---MDAAPNLTSYNILIDMLC 422

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL------------- 234
           +AG+L  A+ V   M++A + PN++  N  I  L    +L +A                 
Sbjct: 423 KAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSV 482

Query: 235 ----------------------ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
                                 E+M  +G TPN + Y  LI+ +    R +D  K+  EM
Sbjct: 483 TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEM 542

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHD---QGRI 320
             +GCSPD +     M  + K   I++ R L E++            S L H     G  
Sbjct: 543 MHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFS 602

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           ++  +L  +M + G   D   Y  V++GFC+ G++++A ++L++M   G +P  V+Y + 
Sbjct: 603 KDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSV 662

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++GL    +  EA  +   ++ +    N + YS ++ G  + G++ EA  ++ E+++KG 
Sbjct: 663 IDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGL 722

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P     N L+ +L +  ++D A    Q   N  C  N V ++ ++ G C+     +A  
Sbjct: 723 TPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFV 782

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
              +M      P+T+TYTT+I  L++ G V EA +L  +  S G +P    Y  +I    
Sbjct: 783 FWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLS 842

Query: 561 QVGRVEDLLKLLEKMLSKQKCRTAYNQ----VIENLCSFGYLEEAGKILGKVLRTASKAD 616
              +  D   L E+   K  CR  Y++    +++ L     LE+A  I+G VLR  +K+ 
Sbjct: 843 NANKAMDAYILFEETRLK-GCRI-YSKTCVVLLDALHKADCLEQAA-IVGAVLREMAKSQ 899

Query: 617 AST 619
            +T
Sbjct: 900 HAT 902


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 193/402 (48%), Gaps = 39/402 (9%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GK   A  ++  M +    P+    +  I  L    K+ KA    + M++ G+TP+V TY
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             LI  +C    I+ A  L +EM   GCSP  V+Y  ++    K K++ +  D+  +MV+
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY--- 366
                                   GC P+ VTY A+V+G C+ G + +A ++  ++    
Sbjct: 387 -----------------------AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423

Query: 367 -------------HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
                         H   PN V+Y A ++GLC   K   A E+++        PN I Y 
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++ G  + GK+  A +V  +M K G+ P+      LI  + ++G++D A K + + L  
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
            C  NVV +T++I G C+ G+ E+AL LL  M      P+ VTYT +ID L K G+++ +
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            +L  +M  KG  P  VTYR +I+  C  G ++    LL +M
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 239/533 (44%), Gaps = 38/533 (7%)

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
           ++++     A     AM  L  M+  +  PN++   T +   +   +L    R +  M  
Sbjct: 111 THMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMT 170

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK- 298
            G  PN   +N L+  YC+      A KL++ M   GC P  V Y   +G +C ++++  
Sbjct: 171 EGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPS 230

Query: 299 -EVRDLMEKM-------------VNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVT 341
            ++ DL EK+             VN +N        G+ ++A +L+ +M + G +PD  T
Sbjct: 231 PDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTST 290

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y+ V+   C   ++++A  + Q+M   G  P+  +YT  ++  C  G   +A+ +     
Sbjct: 291 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 350

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
               +P  +TY+ ++H   +  ++ +A D+   MV  G  P  V    L+  LC+ G + 
Sbjct: 351 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 410

Query: 462 GA---------------KKFMQECLNKGC-AVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
            A                 F   C ++   A NVV + +L+ G C+   ++ A  LLD M
Sbjct: 411 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 470

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                +P+ + Y  +ID   K G+++ A E+ ++M   G +P+V TY ++I R  + GR+
Sbjct: 471 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 530

Query: 566 EDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           +  +K+L +ML K  C      Y  +I+ LC  G  E+A K+L  +       +  T   
Sbjct: 531 DLAMKVLSQML-KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 589

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           L++     G   L+  +  +M  +   P+    + +   L   G  ++A  L+
Sbjct: 590 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL 642



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 222/460 (48%), Gaps = 43/460 (9%)

Query: 154 TKLCQGAK---RVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVA 208
           T LC   K     L     + +   P+ ++Y  L+ ++ +AG +  A ++   M+    +
Sbjct: 296 TFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS 355

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           P ++     IH  +   ++ +A     RM  AG  PN +TY  L+ G C    I  A ++
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415

Query: 269 IDEM-------------PLKG---CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS- 311
             ++             P +     +P+ V+Y  ++  LCK  ++    +L++ M++   
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 312 -----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                      + F   G+I+ A+E+  QM++ G +P V TYT++++   + G LD A K
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L QM    C PN V+YTA ++GLC  G+S +A ++++  EE+  +PN +TY+ ++ GL 
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           + GK+  + D+  +M +KG  P  V   +LI  LC  G +D A+  + E         + 
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            +   I+GF +      +L +L++M      P    Y  +ID  SK GR+E A EL  +M
Sbjct: 656 GYRCAIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713

Query: 541 LSKGLVPTVV-----TYRTVIHRYCQVGRVEDLLKLLEKM 575
           +    VP+ V      Y ++I   C   +VE+  +L  +M
Sbjct: 714 ME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEM 750



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 223/493 (45%), Gaps = 54/493 (10%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A ++++ M R+G       +S ++     A K+  A  +   M+   V P++      I 
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A    E M+  G +P V+TY  LI  Y    ++  A  +   M   GC P
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 391

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFHDQGRIEEAKELVNQMSQMG 334
           + V+Y  ++  LCK   I +  ++  K++      DS+ +      E+   L        
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP---CEDRHTLA------- 441

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P+VVTY A+V+G C+  ++D A ++L  M   GC+PN + Y A ++G C  GK   A+
Sbjct: 442 --PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E+     +  + P+  TY+ ++  + ++G+L  A  V+ +M+K    P  V    +I  L
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CR G+ + A K +     KGC+ NVV +T+LI G  + G ++ +L L   M      P+ 
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619

Query: 515 VTYTTIIDALSKNGRVEEATELM--MK-------------------------------ML 541
           VTY  +I+ L   G +++A  L+  MK                               M 
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 679

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML----SKQKCRTAYNQVIENLCSFGY 597
           S G VP    Y  +I  + + GR+E  ++L ++M+    S +     Y  +I+ LC    
Sbjct: 680 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQ 739

Query: 598 LEEAGKILGKVLR 610
           +EEA ++  ++ R
Sbjct: 740 VEEAFRLYSEMTR 752



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/574 (23%), Positives = 248/574 (43%), Gaps = 50/574 (8%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           + + YR   + Y  ++++LS         RV + M+  G             A  + G+ 
Sbjct: 32  KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRW 91

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            +A   L M+++     + ++C   I  L+  +   +A+ FL RM+     PNV+TY  L
Sbjct: 92  ADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL 148

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           + G+    ++    ++I+ M  +GC+P+   + +++   C EK                 
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY------------- 195

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL------DQAKKMLQQMY 366
                     A +L+N+M+  GC P  V Y   +   C   +L      D A+K+  +M 
Sbjct: 196 ----------AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 245

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
              C  N V+   F   LC  GK  +A ++I     + + P+  TYS V+  L    K+ 
Sbjct: 246 AANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVE 305

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A  + +EM   G  P      +LI S C+ G ++ A+   +E  + GC+  VV +T+LI
Sbjct: 306 KAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 365

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG-- 544
             + +   + +A  +   M      P+ VTY  ++D L K G + +A E+  K++     
Sbjct: 366 HAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS 425

Query: 545 --------------LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQV 588
                         L P VVTY  ++   C+  +V+   +LL+ MLS   +     Y+ +
Sbjct: 426 ADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDAL 485

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I+  C  G ++ A ++  ++ +        T   L++     G   LA KV  +M   + 
Sbjct: 486 IDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC 545

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            P++     + + L   G+SE+A  L+    E+G
Sbjct: 546 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 579



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 205/472 (43%), Gaps = 69/472 (14%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y ++++   K  L + A+ +   M  R + C P   +Y  L+ AY +A ++  A  
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEM--RSVGCSPTVVTYTALIHAYLKAKQVPQAND 379

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG---------------- 241
           +   M  A   PN +     +  L     ++KA     ++                    
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + PNV+TY  L+ G C  H++  A +L+D M   GC P+ + Y  ++   CK  +I   +
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 302 DLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
           ++  +M     L             F D GR++ A ++++QM +  C P+VVTYTA+++G
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKD-GRLDLAMKVLSQMLKDSCTPNVVTYTAMIDG 558

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
            CR+GE ++A K+L  M   GC PN V+YTA ++GL   GK   + ++      +  +PN
Sbjct: 559 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPN 618

Query: 409 AITYSVVMHGLRREGKLSEA---------------------------------CDVVREM 435
            +TY V+++ L   G L +A                                   ++ EM
Sbjct: 619 YVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEM 678

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN--FTSLIRGFCQKG 493
              G  P      +LI    + G+++ A +  +E +    +V   N  + SLI+  C   
Sbjct: 679 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 738

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
            +EEA  L  +M      P+   +  +I  L +  + +EA +L   +  +G+
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 170/381 (44%), Gaps = 35/381 (9%)

Query: 127 FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY 186
           F++  + +     + + Y  +++ L K      A  +L  M   G E     +  L+  +
Sbjct: 430 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 489

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
            +AGK+ +A  V   M K    P++    + I  +    +L  A++ L +M     TPNV
Sbjct: 490 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNV 549

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           +TY  +I G C +   + A+KL+  M  KGCSP+ V+Y  ++  L K             
Sbjct: 550 VTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGK------------- 596

Query: 307 MVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                      G+I+ + +L  QMS+ GC P+ VTY  ++N  C  G LD+A+ +L +M 
Sbjct: 597 ----------AGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 646

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT-PNAITYSVVMHGLRREGKL 425
                     Y   + G     KS  A   I    E + T P A  Y +++    + G+L
Sbjct: 647 QTYWPKYLQGYRCAIQGF---SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRL 703

Query: 426 SEACDVVREMVKKGFFPTPVEIN-----LLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
             A ++ +EM++    P+ V+ +      LIQ+LC   +++ A +   E   +G    + 
Sbjct: 704 EIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELS 760

Query: 481 NFTSLIRGFCQKGDLEEALSL 501
            F  LI+G  +    +EAL L
Sbjct: 761 VFVCLIKGLVEVKKWDEALQL 781



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 145/400 (36%), Gaps = 110/400 (27%)

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           + +   G  P  VTY A+V      G++D   ++ ++M   G   +  +   F + LC  
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 388 GKSLEAREMINTSEEEWWT--------------------------------PNAITYSVV 415
           G+  +A +MI   + +  T                                PN +TY  +
Sbjct: 89  GRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL 148

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK---------------- 459
           + G  ++ +L     ++  M+ +G  P P   N L+ S C E                  
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208

Query: 460 -------------------------MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
                                    +D A+K   E L   C +N VN  +  R  C  G 
Sbjct: 209 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 268

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
            ++A  L+ +M      PDT TY+ +I  L    +VE+A  L  +M   G+ P V TY  
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328

Query: 555 VIHRYCQVGRVEDLLKLLEKMLS--------------------KQ--------------K 580
           +I  +C+ G +E    L E+M S                    KQ               
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388

Query: 581 CR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           CR     Y  +++ LC  G + +A ++  K++ T+  AD+
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADS 428


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/573 (25%), Positives = 266/573 (46%), Gaps = 52/573 (9%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  V  L+AR+G     +  ++L+ +  +A +      V  +M + A  P++      I+
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGA-CPDVFSFTNVIN 251

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L  G K+  A+    +M+  GI+PNV+TYNC+I G C   R+ +A +L ++M +KG  P
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 311

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNL---FHDQGRIEEAKELV 327
           +  +Y  ++  L K     +V  ++++M+           +NL   +   G IE A ++ 
Sbjct: 312 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 371

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG---------------CK- 371
           + M      P  VT  +++ GFC+  +++ A+  L+++   G               CK 
Sbjct: 372 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 431

Query: 372 -------------------PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
                              P+ +  T  + GLC +GK LEA E+     E+    + +T 
Sbjct: 432 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 491

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           + ++HGL   GKL EA  +V+EM+++G     +  N LI   C EGK++G  +  +E   
Sbjct: 492 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 551

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +G   ++  +  L+RG C  G L++A+ L D+        +  TY  +++   K  R+E+
Sbjct: 552 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 611

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK---QKCRTAYNQVI 589
              L  ++LSK +    + Y  +I  +CQ G V   L+LLE M SK     C T Y+ +I
Sbjct: 612 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCAT-YSSLI 670

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
             +C+ G +E+A  ++ ++ +     +      L+  Y   G    A      M + N+ 
Sbjct: 671 HGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIH 730

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           P+      + +     G  E+A+ L+++  E G
Sbjct: 731 PNKFTYTVMIDGYCKLGNMEKANNLLIKMKESG 763



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 215/454 (47%), Gaps = 12/454 (2%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  + +V+  +++   K    +GA ++  +M  + I         LM  + ++ ++ +A 
Sbjct: 344 FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAE 403

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             L  +  + ++ +   C + +H L    +   A RF + M      P+ L    L+ G 
Sbjct: 404 NALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGL 463

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE----VRDLMEKMVNDSN 312
           C   +  +A +L   +  KG    KV+   ++  LC   ++ E    V++++E+ +    
Sbjct: 464 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDR 523

Query: 313 L--------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           +        F ++G++E    L  +M++ G  PD+ TY  ++ G C VG+LD A K+  +
Sbjct: 524 ITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDE 583

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
               G   N  +Y   + G C   +  +   + N    +    N+I Y++++    + G 
Sbjct: 584 FKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGN 643

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           ++ A  ++  M  KG  P     + LI  +C  G ++ AK  + E   +G   NVV +T+
Sbjct: 644 VAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTA 703

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G+C+ G ++ A S   +M      P+  TYT +ID   K G +E+A  L++KM   G
Sbjct: 704 LIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESG 763

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           +VP VVTY  + + +C+   +++  K+ ++M ++
Sbjct: 764 IVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATE 797



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 193/415 (46%), Gaps = 23/415 (5%)

Query: 145 YMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQK 204
           Y ++  L K      A R  ++M  R         + L+    + GK   A  +   + +
Sbjct: 422 YSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLE 481

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
                + +  N  IH L    KL +A R ++ M   G+  + +TYN LI G+C+  +++ 
Sbjct: 482 KGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEG 541

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAK 324
             +L +EM  +G  PD  +Y  ++  LC                       + G++++A 
Sbjct: 542 CFRLREEMTKRGIQPDIYTYNFLLRGLC-----------------------NVGKLDDAI 578

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +L ++    G I ++ TY  ++ G+C+   ++  + +  ++     + N++ Y   +   
Sbjct: 579 KLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 638

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C NG    A +++   + +   PN  TYS ++HG+   G + +A  ++ EM K+GF P  
Sbjct: 639 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 698

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V    LI   C+ G+MD A+    E ++     N   +T +I G+C+ G++E+A +LL  
Sbjct: 699 VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIK 758

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
           M      PD VTY  + +   K   ++ A ++  +M ++GL    +TY T++H +
Sbjct: 759 MKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 68/146 (46%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  ++  +    L + AK ++  M + G       ++ L+  Y + G++  A      M
Sbjct: 665 TYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 724

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
               + PN       I        + KA   L +M+ +GI P+V+TYN L  G+C  + +
Sbjct: 725 ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDM 784

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVM 288
            +A K+ D+M  +G   D+++Y T++
Sbjct: 785 DNAFKVCDQMATEGLPVDEITYTTLV 810


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 151/521 (28%), Positives = 234/521 (44%), Gaps = 79/521 (15%)

Query: 161 KRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
           KRVL +M   G    P+ F+ L+ AY  +G    A  +L  M K    P  ++ N  I  
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGS 416

Query: 221 LVVGNKLAKALRFLE-------RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
            + G+K + +   LE        M   G+  N +  +   +  C   + + A  +I EM 
Sbjct: 417 -ICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDS-------NLFHDQGRIE 321
            +G  PD  +Y  V+GYLC   +++    L E+M     V D        + F   G IE
Sbjct: 476 GQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF- 380
           +A++  N+M ++GC P+VVTYTA+++ + +  ++  A ++ + M   GC PN V+Y+A  
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595

Query: 381 ---------------------------------------------------LNGLCHNGK 389
                                                              L+G C   +
Sbjct: 596 DGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHR 655

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             EAR++++    E   PN I Y  ++ GL + GKL EA +V  EM + GF  T    + 
Sbjct: 656 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSS 715

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI    +  + D A K + + L   CA NVV +T +I G C+ G  +EA  L+  M    
Sbjct: 716 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 775

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P+ VTYT +ID   + G++E   EL+ +M SKG+ P  VTYR +I   C+ G ++   
Sbjct: 776 CQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 835

Query: 570 KLLEKMLSKQKCRTA--YNQVIENLC-----SFGYLEEAGK 603
            LLE+M        A  Y +VIE        S G L+E G+
Sbjct: 836 NLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQ 876



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 159/668 (23%), Positives = 275/668 (41%), Gaps = 76/668 (11%)

Query: 91  WSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEI 150
           +  K +  LR     L    +  VLR        + FF WA RQ  Y+H   VY  ++++
Sbjct: 115 FGSKSQKFLRQFREKLSESLVIEVLRLIERPSAVISFFVWAGRQIGYKHTSPVYNALVDL 174

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           + +    +  + +L+ +     E   E  + L+  Y R+G    A+  L  ++     P+
Sbjct: 175 IVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPS 234

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
               N  I   +  + L  A      M LA +  +  T  C     C + + ++A+ L  
Sbjct: 235 RSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL-- 292

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH------------DQG 318
            M  +   PD V Y  ++  LC+    +E  D + +M   S L +            ++ 
Sbjct: 293 -METENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKK 351

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           ++   K ++N M   GC P    + ++V+ +C  G+   A K+L++M   G  P  V Y 
Sbjct: 352 QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYN 411

Query: 379 AFLNGLCHNGKSLEAR--EMINTSEEEWWTP----NAITYSVVMHGLRREGKLSEACDVV 432
             +  +C +  SL     E+   +  E        N I  S     L   GK  +A  V+
Sbjct: 412 ILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVI 471

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           REM+ +GF P     + ++  LC   KM+ A    +E    G   +V  +T ++  FC+ 
Sbjct: 472 REMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G +E+A    ++M      P+ VTYT +I A  K  +V  A EL   MLS+G +P +VTY
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591

Query: 553 RTVIHRYCQVGRVEDLLKLLEKM------------------------------------- 575
             +I  +C+ G++E   ++ E+M                                     
Sbjct: 592 SALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFC 651

Query: 576 --------------LSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
                         +S + C   +  Y+ +I+ LC  G L+EA ++  ++      A   
Sbjct: 652 KLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLY 711

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           T   L++ Y       LA KV  +M   +  P++ +  ++ + L   GK++EA  LM   
Sbjct: 712 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 771

Query: 679 VERGHIQP 686
            E+G  QP
Sbjct: 772 EEKG-CQP 778



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 231/500 (46%), Gaps = 58/500 (11%)

Query: 156 LCQGAK-----RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           LC   K      V+R M  +G       +S ++     A K+  A  +   M++  +  +
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           +      +        + +A ++   M+  G TPNV+TY  LI  Y    ++  A +L +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHDQGRIEEAKE 325
            M  +GC P+ V+Y  ++   CK  ++++   + E+M     V D +++  Q   + ++ 
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSER 637

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
                      P+VV Y A+++GFC++  +++A+K+L  M   GC+PN + Y A ++GLC
Sbjct: 638 -----------PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 686

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             GK  EA+E+     E  +     TYS ++    +  +   A  V+ +M++    P  V
Sbjct: 687 KVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 746

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               +I  LC+ GK D A K MQ    KGC  NVV +T++I GF + G +E  L LL+ M
Sbjct: 747 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERM 806

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML------------------------ 541
                 P+ VTY  +ID   KNG ++ A  L+ +M                         
Sbjct: 807 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIE 866

Query: 542 SKGLV---------PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC----RTAYNQV 588
           S GL+         P +  YR ++    +  R+E  L+LLE++ +         + YN +
Sbjct: 867 SLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 926

Query: 589 IENLCSFGYLEEAGKILGKV 608
           IE+LC    +++A ++  ++
Sbjct: 927 IESLCLANKVDKAFRLFSEM 946



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 222/490 (45%), Gaps = 83/490 (16%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y +M++   K  L + A++    M  R + C P   +Y  L+ AY +A K+  A  
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTALIHAYLKAKKVSYANE 574

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM----QLAGIT---------- 243
           +   M      PN++  +  I       ++ KA +  ERM     +  +           
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDN 634

Query: 244 ---PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
              PNV+ Y  L+ G+C LHR+++A KL+D M ++GC P+++ Y  ++  LCK       
Sbjct: 635 SERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK------- 687

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                            G+++EA+E+  +MS+ G    + TY+++++ + +V   D A K
Sbjct: 688 ----------------VGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 731

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L +M  + C PN V YT  ++GLC  GK+ EA +++   EE+   PN +TY+ ++ G  
Sbjct: 732 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 791

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           R GK+    +++  M  KG  P  V   +LI   C+ G +D A   ++E        +  
Sbjct: 792 RIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAA 851

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP---------------------------- 512
            +  +I GF    +  E+L LLD++      P                            
Sbjct: 852 GYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEV 909

Query: 513 ---------DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
                     + TY ++I++L    +V++A  L  +M  KG++P + T+ ++I    +  
Sbjct: 910 ATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNS 969

Query: 564 RVEDLLKLLE 573
           ++ + L LL+
Sbjct: 970 KISEALLLLD 979



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 164/381 (43%), Gaps = 31/381 (8%)

Query: 127 FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY 186
           +F   D     R + ++Y  +L+   K    + A+++L  M+  G E     +  L+   
Sbjct: 626 YFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 685

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
            + GKL  A  V + M +      L   ++ I       +   A + L +M      PNV
Sbjct: 686 CKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 745

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           + Y  +I G C + +  +A KL+  M  KGC P+ V+Y  ++                  
Sbjct: 746 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI------------------ 787

Query: 307 MVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                + F   G+IE   EL+ +M   G  P+ VTY  +++  C+ G LD A  +L++M 
Sbjct: 788 -----DGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 842

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                 +   Y   + G   N + +E+  +++   ++   P    Y +++  L +  +L 
Sbjct: 843 QTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLE 900

Query: 427 EACDVVREMVKKGFFPTPVE----INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            A  ++ E+    F  T V+     N LI+SLC   K+D A +   E   KG    +  F
Sbjct: 901 MALRLLEEVAT--FSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTF 958

Query: 483 TSLIRGFCQKGDLEEALSLLD 503
            SLI+G  +   + EAL LLD
Sbjct: 959 CSLIKGLFRNSKISEALLLLD 979



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 145/310 (46%), Gaps = 15/310 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           IVY  +++ L K      A+ V   M+  G       +S L+  Y +  +   A  VLS 
Sbjct: 676 IVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 735

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M + + APN++I    I  L    K  +A + ++ M+  G  PNV+TY  +I G+  + +
Sbjct: 736 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGK 795

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR-- 319
           I+  ++L++ M  KG +P+ V+Y  ++ + CK   +    +L+E+M       H  G   
Sbjct: 796 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRK 855

Query: 320 -IE-------EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM--YHHG 369
            IE       E+  L++++ Q    P +  Y  +V+   +   L+ A ++L+++  +   
Sbjct: 856 VIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSAT 915

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA- 428
               + +Y + +  LC   K  +A  + +   ++   P   T+  ++ GL R  K+SEA 
Sbjct: 916 LVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEAL 975

Query: 429 --CDVVREMV 436
              D +  MV
Sbjct: 976 LLLDFISHMV 985



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 110/245 (44%), Gaps = 20/245 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           ++Y  M++ L K      A +++++M  +G  C+P   +Y  ++  + R GK+   + +L
Sbjct: 746 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKG--CQPNVVTYTAMIDGFGRIGKIETCLELL 803

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    VAPN +     I        L  A   LE M+      +   Y  +I+G+   
Sbjct: 804 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFN-- 861

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD--- 316
               +++ L+DE+     +P    Y  ++  L K +R++    L+E++   S    D   
Sbjct: 862 KEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSS 921

Query: 317 -----------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                        ++++A  L ++MS+ G IP++ T+ +++ G  R  ++ +A  +L  +
Sbjct: 922 TYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFI 981

Query: 366 YHHGC 370
            H  C
Sbjct: 982 SHMVC 986


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 257/551 (46%), Gaps = 25/551 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
            VY  ++  L K      A+ + + M  +G+      +S L+ ++ R GKL  A++ L  
Sbjct: 367 FVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGK 426

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M  A +   +   N+ I+       L+ A+ F + M   G+ P V++Y  LI GYC+  +
Sbjct: 427 MIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGK 486

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A +L  EM  KG +P+  ++ T++  L +  R+ +                      
Sbjct: 487 LHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTD---------------------- 524

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A  L ++M +   +P+ VTY  ++ G C+ G   +A ++L QM   G  P+T +Y   +
Sbjct: 525 -AFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLI 583

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           + LC  G+  EA++ I+    E +  N + YS ++HG  +EG+L +A  V REMVK+G  
Sbjct: 584 SSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVD 643

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
              V   +LI    +E         ++   ++    + V +TS+I G+ + G +++A  +
Sbjct: 644 MDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGI 703

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            D M      P+ VTYTT+I+ L K G +++A  L  +ML     P  VTY   +    +
Sbjct: 704 WDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAR 763

Query: 562 VGRVEDLLKLLEKMLSKQKCRT-AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
            G +E  ++L   ML      T +YN ++   C  G +EEA K+L +++  A   D  T 
Sbjct: 764 EGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITY 823

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
             ++     +G    A +    M N+ L PD      +     + G+  +A  L    + 
Sbjct: 824 STIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIR 883

Query: 681 RGHIQPKSEEH 691
           RG ++P    H
Sbjct: 884 RG-VKPNQATH 893



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 240/528 (45%), Gaps = 45/528 (8%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRG-----------I 172
           AL+FF +      + H  + + +++  L    L   A  +L+ +  RG           +
Sbjct: 88  ALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALL 147

Query: 173 ECRPE-------AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
           +C  +        F  L+ +Y +  ++ +++ +  +M++  + P +      ++ L    
Sbjct: 148 DCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIR 207

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           ++   L     +   GI P++  Y  +I+ +C+L     A ++I  M  +    + V Y 
Sbjct: 208 RVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM--ESSDLNVVVYN 265

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            ++  LCK KR+                        EA E+ N + Q G     VTY  +
Sbjct: 266 VLIHGLCKNKRV-----------------------WEAVEIKNGLIQKGLTASEVTYCTL 302

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           V G C+V E +    ++ +M   G  P   + ++ + GL   GK ++A +++N  ++   
Sbjct: 303 VLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGA 362

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+   Y+ +++ L ++GK  EA  + +EM +KG     V  ++LI S CR GK+D A  
Sbjct: 363 MPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIH 422

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
           F+ + +  G  + V  + SLI G C+ G+L  A+S  D+M      P  V+YT++I    
Sbjct: 423 FLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYC 482

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RT 583
             G++ EA  L  +M  KG+ P   T+ T+I    +  R+ D  +L ++ML +       
Sbjct: 483 NKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEV 542

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            YN +IE  C  G   +A ++L ++++     D  T   L+ S  + G
Sbjct: 543 TYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTG 590



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 204/442 (46%), Gaps = 56/442 (12%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  +G++    +++ L+  Y   GKL  A  +   M    +APN     T I  L   N+
Sbjct: 462 MIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANR 521

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +  A R  + M    + PN +TYN +I+G+C       A +L+++M  KG  PD  +Y  
Sbjct: 522 MTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRP 581

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEA----KELVNQM 330
           ++  LC   R+ E +  ++ +  +         S L H    +GR+ +A    +E+V + 
Sbjct: 582 LISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRG 641

Query: 331 SQMGCI-------------------------------PDVVTYTAVVNGFCRVGELDQAK 359
             M  +                               PD V YT++++G+ + G + +A 
Sbjct: 642 VDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAF 701

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNG----KSLEAREMINTSEEEWWTPNAITYSVV 415
            +   M   GC PN V+YT  +N LC  G      L  +EM+ ++     TPN +TY   
Sbjct: 702 GIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNS----TPNHVTYCCF 757

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +  L REG + +A  +  +M+K G     V  N+L++  C+ G+++ A K + E ++   
Sbjct: 758 LDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAI 816

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             + + ++++I   C++G+L+ A+   D M      PDT+ Y  +I      G + +A E
Sbjct: 817 FPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFE 876

Query: 536 LMMKMLSKGLVPTVVTYRTVIH 557
           L   M+ +G+ P   T++++ H
Sbjct: 877 LRDDMIRRGVKPNQATHKSLSH 898



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 147/336 (43%), Gaps = 51/336 (15%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y + P++      + S  ++C+ AK+ +  + R   +     +S L+  Y + G+LR+A+
Sbjct: 577 YTYRPLIS----SLCSTGRVCE-AKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDAL 631

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            V   M K  V  +L+     I   +     +     L+ M    + P+ + Y  +I GY
Sbjct: 632 GVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGY 691

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK----------------------- 293
                +K A  + D M  +GC+P+ V+Y T++  LCK                       
Sbjct: 692 SKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNH 751

Query: 294 ----------------EKRIKEVRDLMEKMVNDS---NL----FHDQGRIEEAKELVNQM 330
                           EK ++   D+++ ++ ++   N+    F   GR+EEA +L+++M
Sbjct: 752 VTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEM 811

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
                 PD +TY+ ++   CR G LD A +    M + G KP+T++Y   + G C  G+ 
Sbjct: 812 IDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGEL 871

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
            +A E+ +        PN  T+  + HG  R+  +S
Sbjct: 872 GKAFELRDDMIRRGVKPNQATHKSLSHGASRKFSIS 907



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 28/250 (11%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLR 193
           R R D ++Y  M++  SK    + A  +  +M   G  C P   +Y  L+    +AG + 
Sbjct: 676 RLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEG--CTPNIVTYTTLINELCKAGLMD 733

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  +   M  +   PN +     +  L     + KA++    M L G+  N ++YN L+
Sbjct: 734 KAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSYNILV 792

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
           +G+C L R+++A KL+DEM      PD ++Y T++   C+                    
Sbjct: 793 RGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCR-------------------- 832

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
              +G ++ A E  + M   G  PD + Y  ++ G C  GEL +A ++   M   G KPN
Sbjct: 833 ---RGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPN 889

Query: 374 TVSYTAFLNG 383
             ++ +  +G
Sbjct: 890 QATHKSLSHG 899



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 117/275 (42%), Gaps = 35/275 (12%)

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           +++ + +++    +E ++ ++  + R M +    P    +  ++  L +  ++D      
Sbjct: 157 SSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLF 216

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            E L+ G   ++  + ++IR FC+  +  +A  ++  M     D + V Y  +I  L KN
Sbjct: 217 GEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRME--SSDLNVVVYNVLIHGLCKN 274

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQ 587
            RV EA E+   ++ KGL  + VTY T++   C+V   E    ++++M+           
Sbjct: 275 KRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIE---------- 324

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
                            LG V   A+ +       LVE    KG  + A+ +  R+    
Sbjct: 325 -----------------LGFVPTEAALSS------LVEGLRRKGKVVDAFDLVNRVKKVG 361

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +P L +   +   L  +GK +EA+ L     E+G
Sbjct: 362 AMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKG 396


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 246/534 (46%), Gaps = 17/534 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+   M   G++      + L+  Y +  KL +A+     M +   +PN +     I 
Sbjct: 333 ALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIE 392

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  +AKA     +M+   I P V   N LI+G+  +   ++A KL DE     C  
Sbjct: 393 WCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAV--ACDI 450

Query: 280 DKV-SYYTVMGYLCKEKRIKEVRDLMEKMV-----------NDSNLFH-DQGRIEEAKEL 326
             + +Y +++ +LCKE ++ E   L +KM+           N   L H  QG ++ A  +
Sbjct: 451 ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASV 510

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
            + M   G  P+V+TY+ +++G+ + G+ + A  +  +M      P+  +Y   +NGLC 
Sbjct: 511 FSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCK 570

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G++ EA++M+    E+ + P  +TY+ +M G  +EG +S A    REM + G  P  + 
Sbjct: 571 VGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVIT 630

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
              LI   C+    D A K   E  NKG  +++  + +LI GFC+K D+E A  L  ++ 
Sbjct: 631 YTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELL 690

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                P++V Y ++I        +E A  L  +ML +G+   + TY T+I    + GR+ 
Sbjct: 691 DGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLV 750

Query: 567 DLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
             L L  +M +K        Y  +I  LC  G LE A KIL ++ R +   +    + L+
Sbjct: 751 LALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALI 810

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
             +   G    A+++   M ++ L P+      +    I  G S     L L+F
Sbjct: 811 AGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSALKSLLSLKF 864



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/548 (23%), Positives = 233/548 (42%), Gaps = 64/548 (11%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++YL+ +Y +A KL +A+   + + ++ + P +   N  +  LV  + + +A    E+M 
Sbjct: 177 YNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMV 236

Query: 239 LAGITPNVLT-----------------------------------YNCLIKGYCDLHRIK 263
           L G+  +  T                                   Y+ +I+ +C    ++
Sbjct: 237 LKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVE 296

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
            A  L+ +M  KG  P + ++ +V+G   K                       QG + EA
Sbjct: 297 LACGLLKDMRDKGWVPSEGTFTSVIGACVK-----------------------QGNMVEA 333

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
             L ++M   G   +VV  T +V G+C+  +L  A +   +M  +G  PN V+Y   +  
Sbjct: 334 LRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEW 393

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
            C NG   +A ++    + +   P     + ++ G  +     EA  +  E V       
Sbjct: 394 CCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACD-IAN 452

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
               N L+  LC+EGKM  A    Q+ L+KG A   V++ S+I G C++G+L+ A S+  
Sbjct: 453 IFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFS 512

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           DM  C   P+ +TY+ ++D   KNG  E A  +  +M+ + +VP+  TY   I+  C+VG
Sbjct: 513 DMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVG 572

Query: 564 RVEDLLKLLEKMLSK---QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           R  +   +L+K + K     C T YN +++     G +  A     ++  +    +  T 
Sbjct: 573 RTSEAQDMLKKFVEKGFVPVCLT-YNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITY 631

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
             L+  +       LA K+   M N+ L  D+     + +    +   E A  L    ++
Sbjct: 632 TTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLD 691

Query: 681 RGHIQPKS 688
            G + P S
Sbjct: 692 -GGLSPNS 698



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 71/145 (48%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + ++Y  ++         + A  + + M   GI C  + ++ L+    + G+L  A+ + 
Sbjct: 697 NSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLY 756

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S M    + P+++I    I+ L    +L  A + L  M+   ITPNV  YN LI G+   
Sbjct: 757 SEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKA 816

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSY 284
             +++A +L +EM  KG +P+  +Y
Sbjct: 817 GNLQEAFRLHNEMLDKGLTPNDTTY 841


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 248/504 (49%), Gaps = 16/504 (3%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  ++   ++    + A +V+  M   G E     ++ L V   +AGK+  A  +   M
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEM 339

Query: 203 QKAAVA-PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           ++ + A P+++  NT +         + ALR LE M+  G+ P ++T+N ++K  C   +
Sbjct: 340 ERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN----------DS 311
           +++A+  ++++  +G +PD ++Y T++   CK   + +   LM++MV           ++
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459

Query: 312 NLFH--DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
            L++     R E+A+EL++   Q G +PD V+Y  V+  + +    + A ++  QM    
Sbjct: 460 VLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             P+  +Y   + GLC   +  EA + +N   E+   P+  TY++++H   +EG L  A 
Sbjct: 520 LIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAF 579

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
               +MV+  F P  V  N L+  LC  GK+D A K  +  + KG  V+V+ + +LI+  
Sbjct: 580 RFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSM 639

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ GD++ AL   DDM +    PD  TY  ++ ALS+ GR EEA  ++ K+   G +   
Sbjct: 640 CKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQS 699

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILG 606
                +         V++     E   S++    A   Y + +  LC+ G L+EA  +L 
Sbjct: 700 FACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLD 759

Query: 607 KVLRTASKADASTCHVLVESYLNK 630
           ++++     D+ST   L+E  + +
Sbjct: 760 EMMQKGMPVDSSTYITLMEGLIKR 783



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 226/444 (50%), Gaps = 26/444 (5%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + PN  T+N L+  +C    + DA+  +  M   G SPD V+Y T++   C+        
Sbjct: 204 LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCR-------- 255

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                          +G + EA+ L+ +M + G  P   TY  +V+ F R+G + QA K+
Sbjct: 256 ---------------KGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKV 300

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE-EWWTPNAITYSVVMHGLR 420
           ++ M  +G +P+  +Y     GLC  GK  EA  + +  E      P+ +TY+ ++    
Sbjct: 301 VESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACF 360

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +    S+A  ++ EM  KG  PT V  N++++SLC+EGK++ A   +++   +G A +V+
Sbjct: 361 KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +LI  +C+ G++ +A +L+D+M       DT T  T++  L K  R E+A EL+   
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP 480

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYL 598
             +G VP  V+Y TV+  Y +    E  L+L ++M+ ++     + YN +I+ LC    L
Sbjct: 481 PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERL 540

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           +EA   L +++      D +T ++++ +Y  +G    A++   +M   +  PD+  C  +
Sbjct: 541 KEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600

Query: 659 SERLILEGKSEEADTLMLRFVERG 682
              L L GK ++A  L   +VE+G
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKG 624



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 250/537 (46%), Gaps = 26/537 (4%)

Query: 152 SKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNL 211
           S + L Q +  V R +    +      F+ L+  +   G L +A+  LS MQ   ++P+ 
Sbjct: 184 SPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDA 243

Query: 212 LICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
           +  NT ++       L +A   L RM+  GI P   TYN L+  +  L  IK A K+++ 
Sbjct: 244 VTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVES 303

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMS 331
           M   G  PD  +Y  +   LC+                        G+++EA  L ++M 
Sbjct: 304 MTAYGFEPDLRTYNVLAVGLCQ-----------------------AGKVDEAFRLKDEME 340

Query: 332 QMG-CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
           ++   +PDVVTY  +V+   +      A ++L++M   G KP  V++   +  LC  GK 
Sbjct: 341 RLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKL 400

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA   +    EE   P+ ITY+ ++    + G +++A  ++ EMV KG       +N +
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTV 460

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           + +LC+  + + A++ +     +G   + V++ +++  + ++ + E AL L D M   K 
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P   TY T+I  L +  R++EA + + +++ KGLVP   TY  +IH YC+ G +E+  +
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580

Query: 571 LLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
              KM+  S +      N ++  LC  G L++A K+    +    K D  T + L++S  
Sbjct: 581 FHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMC 640

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ 685
             G    A      M  + L PD      V   L   G+SEEA  ++ +  + G + 
Sbjct: 641 KVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLS 697



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/437 (23%), Positives = 198/437 (45%), Gaps = 52/437 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMY 197
           D + Y  +++   K +    A R+L  M  +G+  +P   ++ +V  S  + GKL  A+ 
Sbjct: 348 DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGV--KPTLVTHNIVVKSLCKEGKLEEALG 405

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            L  + +  +AP+++  NT I        +AKA   ++ M   G+  +  T N ++   C
Sbjct: 406 KLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC 465

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND------- 310
            + R +DA +L+   P +G  PD+VSY TVM    KE   +    L ++M+         
Sbjct: 466 KMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS 525

Query: 311 --SNLFHDQGRIEEAKELVNQMSQM---GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             + L     R+E  KE +++++++   G +PD  TY  +++ +C+ G+L+ A +   +M
Sbjct: 526 TYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKM 585

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
             +  KP+ V+    +NGLC +GK  +A ++  +  E+    + ITY+ ++  + + G +
Sbjct: 586 VENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDV 645

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG-------CAV- 477
             A     +M  KG  P     N+++ +L   G+ + A   + +  + G       C + 
Sbjct: 646 DTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLL 705

Query: 478 ----------------------------NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
                                        +  +   + G C  G L+EA ++LD+M    
Sbjct: 706 KPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKG 765

Query: 510 KDPDTVTYTTIIDALSK 526
              D+ TY T+++ L K
Sbjct: 766 MPVDSSTYITLMEGLIK 782



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 152/358 (42%), Gaps = 44/358 (12%)

Query: 334 GCIPDVVTYTAVVNGFCRV------GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           G  P +    AV++   R         LD  + +++   H    PN  ++   ++  C  
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLH----PNHYTFNLLVHTHCSK 221

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G   +A   ++T +    +P+A+TY+ +++   R+G L EA  ++  M + G  PT    
Sbjct: 222 GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTY 281

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM-Y 506
           N L+ +  R G +  A K ++     G   ++  +  L  G CQ G ++EA  L D+M  
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMER 341

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
           L    PD VTY T++DA  K     +A  L+ +M  KG+ PT+VT+              
Sbjct: 342 LSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTH-------------- 387

Query: 567 DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
                              N V+++LC  G LEEA   L K+       D  T + L+++
Sbjct: 388 -------------------NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           Y   G    A+ +   M  + L  D      V   L    + E+A+ L+    +RG +
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFV 486


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 253/547 (46%), Gaps = 62/547 (11%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y ++ +VY+++     K+   + A  V R+M   G+      +S LMVA+ +   +   +
Sbjct: 196 YTYNGLVYFLV-----KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 250

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           ++L  M+   V PN+      I VL    +  +A R L +M+  G  P+V+T+  LI+  
Sbjct: 251 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 310

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           CD  RI DA  +  +M      PD+V+Y T++         + V ++   M  D   ++D
Sbjct: 311 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG--YND 368

Query: 317 Q--------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                          GR+ EA E+ ++M Q G +P+  +Y ++++GF +      A ++ 
Sbjct: 369 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 428

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           + M  HG KPN  ++  F+N    +G+S++A +     + +   P+ +  + V+ GL + 
Sbjct: 429 KHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 488

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV-- 480
           G+L  A  V  E+   G  P  +   ++I+   +  K D A K   + +   C  +V+  
Sbjct: 489 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAV 548

Query: 481 ---------------------------------NFTSLIRGFCQKGDLEEALSLLDDMYL 507
                                             + +L+ G  ++G ++E + LL++MY 
Sbjct: 549 NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 608

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ +TY TI+D L KNG V +A +++  M +KG +P + +Y TVI+   +  R  +
Sbjct: 609 SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE 668

Query: 568 LLKLLEKMLSKQKCRTAYNQVIENLCSF---GYLEEAGKILGK-VLRTASKADASTCHVL 623
              +  +M  K+     Y  +   L SF   G ++EA  I+    L+  SK D S+CH L
Sbjct: 669 AFSIFCQM--KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSL 726

Query: 624 VESYLNK 630
           +E  L K
Sbjct: 727 MEGILKK 733



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 146/628 (23%), Positives = 267/628 (42%), Gaps = 54/628 (8%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           +   LRS      AL+ F  A R+ R  H       MLE++           V  +M R+
Sbjct: 95  VIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ 154

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
            ++     F+ +       G LR+A   L +M++A +  N    N  ++ LV      +A
Sbjct: 155 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREA 214

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           L     M + G+ P+V TY+ L+  +     ++  + L+ EM   G  P+  SY   +  
Sbjct: 215 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 274

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
           L + KR  E   ++ KM N+              +  D GRI +AK++  +M +    PD
Sbjct: 275 LGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 334

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            VTY  +++ F   G+     ++   M   G   N V+YTA ++ LC  G+  EA EM +
Sbjct: 335 RVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFD 394

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE------------------------ 434
             +++   P   +Y+ ++ G  +  +  +A ++ +                         
Sbjct: 395 EMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSG 454

Query: 435 -----------MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
                      M  KG  P  V  N ++  L + G++  AK+   E    G + + + +T
Sbjct: 455 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 514

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            +I+   +    +EA+ +  DM      PD +   ++ID L K GR +EA  +  ++   
Sbjct: 515 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM 574

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEA 601
            L PT  TY T++    + G+V++++ LLE+M           YN +++ LC  G + +A
Sbjct: 575 NLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDA 634

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
             +L  +       D S+ + ++   + +     A+ + C+M  + LIPD      +   
Sbjct: 635 LDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPS 693

Query: 662 LILEGKSEEADTLMLRFVERGHIQPKSE 689
            +  G  +EA    L  ++   +QP S+
Sbjct: 694 FVKIGLMKEA----LHIIKDYFLQPGSK 717



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 181/426 (42%), Gaps = 53/426 (12%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +++ L K      A R+   +    +E     ++ L+    R GK++  M++L  M  + 
Sbjct: 551 LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN 610

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG----------- 255
             PNL+  NT +  L     +  AL  L  M   G  P++ +YN +I G           
Sbjct: 611 YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAF 670

Query: 256 --YCDLHRI---------------------KDAIKLIDEMPLK-GCSPDKVSYYTVMGYL 291
             +C + ++                     K+A+ +I +  L+ G   D+ S +++M  +
Sbjct: 671 SIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGI 730

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKELVNQMSQMGCIPDV 339
            K+  I++  +  E + +      D            Q +  EA ELV +    G     
Sbjct: 731 LKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKT 790

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
             Y +++ G      +D A+ +  +M   GC P+  +Y   L+ +   GKS+   EM+  
Sbjct: 791 GLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM---GKSMRIEEMLKV 847

Query: 400 SEE---EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
            EE   + +    +TY+ ++ GL +  +L +A D+   ++ +GF PTP     L+  L +
Sbjct: 848 QEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLK 907

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            G+++ A+    E L  GC  N   +  L+ G    G+ E+   L  DM     +PD  +
Sbjct: 908 AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS 967

Query: 517 YTTIID 522
           YT IID
Sbjct: 968 YTIIID 973



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 201/456 (44%), Gaps = 39/456 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
           D I Y MM++  SK      A ++   M      C P+  A + L+    +AG+   A  
Sbjct: 509 DTITYTMMIKCCSKASKFDEAVKIFYDMIEN--NCVPDVLAVNSLIDTLYKAGRGDEAWR 566

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   +++  + P     NT +  L    K+ + +  LE M  +   PN++TYN ++   C
Sbjct: 567 IFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLC 626

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               + DA+ ++  M  KGC PD  SY TV+  L KE+R  E                  
Sbjct: 627 KNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE------------------ 668

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY-HHGCKPNTVS 376
                A  +  QM ++  IPD  T   ++  F ++G + +A  +++  +   G K +  S
Sbjct: 669 -----AFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSS 722

Query: 377 YTAFLNGLCHNG---KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             + + G+       KS+E  E+I +S     T +      ++  L ++ K  EA ++V+
Sbjct: 723 CHSLMEGILKKAGIEKSIEFAEIIASS---GITLDDFFLCPLIKHLCKQKKALEAHELVK 779

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           +    G        N LI  L  E  +D A+    E    GC  +   +  L+    +  
Sbjct: 780 KFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSM 839

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            +EE L + ++M+    +   VTY TII  L K+ R+E+A +L   ++S+G  PT  TY 
Sbjct: 840 RIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYG 899

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLS---KQKCRTAYN 586
            ++    + GR+ED   L  +ML    K  C T YN
Sbjct: 900 PLLDGLLKAGRIEDAENLFNEMLEYGCKANC-TIYN 934


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 208/421 (49%), Gaps = 44/421 (10%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GK   A  ++ +M      P+    +  I  L    K+ KA    + M+  G+ P+V TY
Sbjct: 267 GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY 326

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             LI  +C    I+ A    DEM   GCS + V+Y  ++    K K++ +  D+  +M++
Sbjct: 327 TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID 386

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM---- 365
                                   GC P+ +TY+A+V+G C+ GE+ +A ++  ++    
Sbjct: 387 -----------------------AGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTS 423

Query: 366 -------YHHG-----CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
                  Y  G       PN V+Y A ++GLC   K ++A+E+++        PN I Y 
Sbjct: 424 DNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYD 483

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++ G  + GK+  A +V   M K G+ PT      LI ++ ++ ++D A K + + +  
Sbjct: 484 ALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVES 543

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
            C  NVV +T++I G C+ G+ ++AL LL  M      P+ VTYT +ID L K+G+V+ +
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLS 603

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLC 593
            +L ++M +KG  P  VTYR +I+  C  G +++   LL +M  KQ   T + + ++  C
Sbjct: 604 LQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM--KQ---TYWPKYLQGYC 658

Query: 594 S 594
           S
Sbjct: 659 S 659



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 225/461 (48%), Gaps = 38/461 (8%)

Query: 154 TKLCQGAK---RVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVA 208
           T LC+  K     L     + +   P+ ++Y  L+ ++ +AG +  A      M+    +
Sbjct: 296 TFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCS 355

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA--- 265
            N++     +H  +   +L +A     RM  AG  PN +TY+ L+ G C    I+ A   
Sbjct: 356 ANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEV 415

Query: 266 -IKLIDEMPLKGC------------SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-- 310
             KLI      G             +P+ V+Y  ++  LCK  ++ + ++L++ M+++  
Sbjct: 416 YTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGC 475

Query: 311 --SNLFHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
             +++ +D         G+I+ A+E+  +MS+ G +P V TYT++++   +   LD A K
Sbjct: 476 EPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMK 535

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L QM    C PN V+YTA ++GLC  G+  +A ++++  EE+  +PN +TY+ ++ GL 
Sbjct: 536 VLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLG 595

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           + GK+  +  +  +M  KG  P  V   +LI   C  G +D A   + E         + 
Sbjct: 596 KSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQ 655

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL---M 537
            + S+++GF +K     +L LL+++      P    Y  +ID  SK GR+EEA EL   M
Sbjct: 656 GYCSVVQGFSKK--FIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEM 713

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           M++ S   + +   Y ++I   C   ++E   +L  ++  K
Sbjct: 714 MELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRK 754



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 230/484 (47%), Gaps = 35/484 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A +++++M  +G       +S ++     A K+  A  +   M+   V P++      I 
Sbjct: 272 AFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILID 331

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A  + + M+  G + NV+TY  L+  Y    ++  A  + + M   GC P
Sbjct: 332 SFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPP 391

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL----FHDQG----------------- 318
           + ++Y  ++  LCK   I++  ++  K++  S+     F+ +G                 
Sbjct: 392 NTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALI 451

Query: 319 -------RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                  ++ +A+EL++ M   GC P+ + Y A+++GFC+VG++D A+++  +M   G  
Sbjct: 452 DGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYL 511

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P   +YT+ ++ +  + +   A ++++   E   TPN +TY+ ++ GL R G+  +A  +
Sbjct: 512 PTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKL 571

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           +  M +KG  P  V    LI  L + GK+D + +   +   KGCA N V +  LI   C 
Sbjct: 572 LSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCA 631

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G L+EA SLL +M           Y +++   SK  +   +  L+ ++ S G VP    
Sbjct: 632 AGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSK--KFIASLGLLEELESHGTVPIAPV 689

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQK-----CRTAYNQVIENLCSFGYLEEAGKILG 606
           Y  +I  + + GR+E+ L+L ++M+          +  Y  +I+ LC    LE+A ++  
Sbjct: 690 YGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYS 749

Query: 607 KVLR 610
           ++ R
Sbjct: 750 EITR 753



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 220/465 (47%), Gaps = 37/465 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++   K  L + A+     M   G       ++ L+ AY +A +L  A  + 
Sbjct: 322 DVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIF 381

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR----------------FLERMQLAGIT 243
           + M  A   PN +  +  +  L    ++ KA                  + E      I 
Sbjct: 382 NRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIA 441

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           PNV+TY  LI G C  H++ DA +L+D M   GC P+ + Y  ++   CK  +I   +++
Sbjct: 442 PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501

Query: 304 MEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
             +M     L             F D+ R++ A ++++QM +  C P+VVTYTA+++G C
Sbjct: 502 FLRMSKCGYLPTVHTYTSLIDAMFKDR-RLDLAMKVLSQMVESSCTPNVVTYTAMIDGLC 560

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           R+GE  +A K+L  M   GC PN V+YTA ++GL  +GK   + ++      +   PN +
Sbjct: 561 RIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYV 620

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE-INLLIQSLCREGKMDGAKKFMQE 469
           TY V+++     G L EA  ++ EM K+ ++P  ++    ++Q   +  K   +   ++E
Sbjct: 621 TYRVLINHCCAAGLLDEAHSLLSEM-KQTYWPKYLQGYCSVVQGFSK--KFIASLGLLEE 677

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT---YTTIIDALSK 526
             + G       +  LI  F + G LEEAL L  +M       +  +   YT++I AL  
Sbjct: 678 LESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCL 737

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
             ++E+A EL  ++  KG+VP +  +  +I    +V +  + L+L
Sbjct: 738 ASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQL 782



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/564 (24%), Positives = 248/564 (43%), Gaps = 49/564 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           ++ D ++   M+  L +  L   A   L  M  R   C P   +Y  L+  + +  +L  
Sbjct: 103 FKLDTVLCTQMISGLMEASLFDEAISFLHRM--RCNSCIPNVVTYRTLLTGFLKKKQLGW 160

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
              +++MM K    PN  + N+ +H          A + L+RM   G  P  + YN  I 
Sbjct: 161 CKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIG 220

Query: 255 GYCDLHRIKD------AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM- 307
             C    +        A K+ +EM    C  +KV+       LC   +      +++ M 
Sbjct: 221 SICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMM 280

Query: 308 ----VNDSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
               V D++ +        +  ++E+A  L  +M  +G  PDV TYT +++ FC+ G ++
Sbjct: 281 GKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIE 340

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           QA+    +M   GC  N V+YTA L+      +  +A ++ N   +    PN ITYS ++
Sbjct: 341 QARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALV 400

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD--GAKKFMQECLNKG 474
            GL + G++ +AC+V  +++                     G  D  G+  + +      
Sbjct: 401 DGLCKAGEIQKACEVYTKLI---------------------GTSDNVGSDFYFEGKHTDS 439

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
            A NVV + +LI G C+   + +A  LLD M     +P+ + Y  +ID   K G+++ A 
Sbjct: 440 IAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQ 499

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIEN 591
           E+ ++M   G +PTV TY ++I    +  R++  +K+L +M+ +  C      Y  +I+ 
Sbjct: 500 EVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMV-ESSCTPNVVTYTAMIDG 558

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC  G  ++A K+L  +       +  T   L++     G   L+ ++  +M  +   P+
Sbjct: 559 LCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPN 618

Query: 652 LKLCKKVSERLILEGKSEEADTLM 675
               + +       G  +EA +L+
Sbjct: 619 YVTYRVLINHCCAAGLLDEAHSLL 642



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 133/574 (23%), Positives = 250/574 (43%), Gaps = 50/574 (8%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           + + YR     Y  ++++L+         RV + M+  G             A  + G+ 
Sbjct: 32  KDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRW 91

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            +A   L M+++     + ++C   I  L+  +   +A+ FL RM+     PNV+TY  L
Sbjct: 92  SDA---LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTL 148

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           + G+    ++    ++I+ M  +GC+P+   + +++   C        RD          
Sbjct: 149 LTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCN------ARDY--------- 193

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ------AKKMLQQMY 366
                     A +L+ +M+  GC P  V Y   +   C   EL        A+K+ ++M 
Sbjct: 194 --------PYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEML 245

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
              C  N V+   F   LC  GK   A ++I     + + P+  TYS V+  L    K+ 
Sbjct: 246 ASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVE 305

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A  + +EM   G  P      +LI S C+ G ++ A+ +  E  + GC+ NVV +T+L+
Sbjct: 306 KAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALL 365

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML----- 541
             + +   L +A  + + M      P+T+TY+ ++D L K G +++A E+  K++     
Sbjct: 366 HAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDN 425

Query: 542 -----------SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQV 588
                      +  + P VVTY  +I   C+  +V D  +LL+ MLS   +     Y+ +
Sbjct: 426 VGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDAL 485

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I+  C  G ++ A ++  ++ +        T   L+++        LA KV  +M   + 
Sbjct: 486 IDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSC 545

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            P++     + + L   G+ ++A  L+    E+G
Sbjct: 546 TPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKG 579



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 166/385 (43%), Gaps = 28/385 (7%)

Query: 120 DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF 179
            + V   F++          + + Y  +++ L K      A+ +L  M   G E     +
Sbjct: 423 SDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIY 482

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
             L+  + + GK+ NA  V   M K    P +    + I  +    +L  A++ L +M  
Sbjct: 483 DALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVE 542

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
           +  TPNV+TY  +I G C +   + A+KL+  M  KGCSP+ V+Y  ++  L K      
Sbjct: 543 SSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGK------ 596

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                             G+++ + +L  QMS  GC P+ VTY  ++N  C  G LD+A 
Sbjct: 597 -----------------SGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAH 639

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            +L +M           Y + + G   + K + +  ++   E     P A  Y +++   
Sbjct: 640 SLLSEMKQTYWPKYLQGYCSVVQGF--SKKFIASLGLLEELESHGTVPIAPVYGLLIDNF 697

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINL---LIQSLCREGKMDGAKKFMQECLNKGCA 476
            + G+L EA ++ +EM++          ++   LIQ+LC   +++ A +   E   KG  
Sbjct: 698 SKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVV 757

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSL 501
             +  F  LI+G  +     EAL L
Sbjct: 758 PELSVFVCLIKGLIKVNKWNEALQL 782



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 141/311 (45%), Gaps = 13/311 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I+Y  +++   K      A+ V   M++ G       ++ L+ A  +  +L  AM VLS 
Sbjct: 480 IIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQ 539

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +++  PN++     I  L    +  KAL+ L  M+  G +PNV+TY  LI G     +
Sbjct: 540 MVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGK 599

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG--- 318
           +  +++L  +M  KGC+P+ V+Y  ++ + C    + E   L+ +M       + QG   
Sbjct: 600 VDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCS 659

Query: 319 -------RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                  +   +  L+ ++   G +P    Y  +++ F + G L++A ++ ++M      
Sbjct: 660 VVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSS 719

Query: 372 PNTVS---YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
            N  S   YT+ +  LC   +  +A E+ +    +   P    +  ++ GL +  K +EA
Sbjct: 720 LNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEA 779

Query: 429 CDVVREMVKKG 439
             +   +  +G
Sbjct: 780 LQLCYSICDEG 790



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 17/169 (10%)

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           E+   G+ P+    N L+Q L   G+MD   +  +E    G  ++        +  C++G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 494 DLEEALSLL--DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
              +AL ++  +D  L     DTV  T +I  L +    +EA   + +M     +P VVT
Sbjct: 90  RWSDALVMIEREDFKL-----DTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVT 144

Query: 552 YRTVIHRYC---QVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCS 594
           YRT++  +    Q+G  + ++     M+ K+ C    + +N ++ + C+
Sbjct: 145 YRTLLTGFLKKKQLGWCKRII----NMMMKEGCNPNPSLFNSLVHSYCN 189


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 231/450 (51%), Gaps = 23/450 (5%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           NT +       +LA A R L   +  G   NV+TY  LI GYC   R+ DA++LI  MP+
Sbjct: 128 NTLVAGYCRDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASMPV 186

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEE 322
              +PD  +Y TV+  LC  K+ +E  +LM +M+ +               F   G ++ 
Sbjct: 187 ---APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDR 243

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A +L++QM + GC PDVV Y+ ++NGF   G +DQA  +L  M    CKPNTV Y A L 
Sbjct: 244 AVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALK 300

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC   +  +  E++     +  +PN  T+S+++  L +   +  A +V+ +M K G  P
Sbjct: 301 GLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEP 360

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V  N++I SL   G++D A + +   +   C  + + F ++++GFC+     +A  L+
Sbjct: 361 DTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELI 417

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
             M+        +T+  +ID L +NG V  AT++  +M      P +VTY ++++ + + 
Sbjct: 418 AQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQ 477

Query: 563 GRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           G VE  ++L   M  K     +YN V++ LC     E+AG+++ +++      +  T ++
Sbjct: 478 GLVEVAIQLFRSMPCKPDI-FSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNI 536

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           L+ S   KG+   A +V  +M N    PD+
Sbjct: 537 LINSLCQKGLVDRAIEVLEQMPNYGSTPDI 566



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 235/450 (52%), Gaps = 23/450 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ L+  Y R+G+L +A+ +++ M    VAP+    NT +  L +  K  +A   +  M 
Sbjct: 161 YTALIDGYCRSGRLDDALRLIASM---PVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMI 217

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
                PN +T+   I+ +C    +  A++L+D+MP  GC+PD V Y T++    ++  + 
Sbjct: 218 RNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVD 277

Query: 299 EVRDLMEKMVNDSNLFHDQG---------RIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
           +  DL+  M+   N               R E+  EL+ +M + GC P+  T++ +++  
Sbjct: 278 QALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSL 337

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+   +D A ++L+QM  +GC+P+TV+Y   +N L   G+  +A  ++N+   +   P+A
Sbjct: 338 CQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDA 394

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           + ++ V+ G  R  +  +A +++ +M +       +  N+LI +LC+ G ++ A +  ++
Sbjct: 395 LGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQ 454

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
                C  ++V ++SL+ GF ++G +E A+ L   M  CK  PD  +Y  ++  L +  R
Sbjct: 455 MPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP-CK--PDIFSYNAVLKGLCRAAR 511

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQ 587
            E+A EL+ +M+ K   P  VT+  +I+  CQ G V+  +++LE+M +         YN 
Sbjct: 512 WEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNA 571

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADA 617
           +I      G L++A K+L  +   + K DA
Sbjct: 572 LINGFSEQGRLDDALKLLSTM---SCKPDA 598



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 215/435 (49%), Gaps = 24/435 (5%)

Query: 136 RYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGK 191
           R R  P  + +   +    +  L   A ++L  M R G  C P+   +S L+  +S  G 
Sbjct: 218 RNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYG--CTPDVVIYSTLINGFSEQGH 275

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +  A+ +L+ M      PN +  N A+  L +  +       +  M   G +PN  T++ 
Sbjct: 276 VDQALDLLNTM---LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSM 332

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI   C  + +  A++++++M   GC PD V+Y  ++  L +  R+ +   L+  MV   
Sbjct: 333 LISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKP 392

Query: 312 NL---------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
           +          F    R  +A EL+ QM +  C    +T+  +++  C+ G ++ A ++ 
Sbjct: 393 DALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVF 452

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           +QM  + C P+ V+Y++ LNG    G    A ++  +   +   P+  +Y+ V+ GL R 
Sbjct: 453 EQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRA 509

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            +  +A +++ EMV K   P  V  N+LI SLC++G +D A + +++  N G   ++  +
Sbjct: 510 ARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTY 569

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            +LI GF ++G L++AL LL  M  CK  PD ++Y + +  L +  R ++A EL+ +ML 
Sbjct: 570 NALINGFSEQGRLDDALKLLSTMS-CK--PDAISYNSTLKGLCRAERWQDAEELVAEMLR 626

Query: 543 KGLVPTVVTYRTVIH 557
               P  VT++   H
Sbjct: 627 NKCTPNEVTFKYANH 641



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 141/294 (47%), Gaps = 10/294 (3%)

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           ++   ++   C  G L  A+++L  +       + VS+   + G C +G+  +A  ++  
Sbjct: 91  ISCNILIKKLCATGRLADAERVLDALKAAA-AADAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
           +       N +TY+ ++ G  R G+L    D +R +      P     N +++ LC   K
Sbjct: 150 ARATG-AANVVTYTALIDGYCRSGRLD---DALRLIASMPVAPDTYTYNTVLKGLCIAKK 205

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
            + A++ M E +   C  N V F + IR FCQ G L+ A+ LLD M      PD V Y+T
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK- 578
           +I+  S+ G V++A +L+  ML K   P  V Y   +   C   R ED+ +L+ +M+ K 
Sbjct: 266 LINGFSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 579 -QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
                  ++ +I +LC    ++ A ++L ++ +   + D    ++++ S   +G
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERG 376


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 193/402 (48%), Gaps = 39/402 (9%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GK   A  ++  M +    P+    +  I  L    K+ KA    + M++ G+TP+V TY
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             LI  +C    I+ A  L +EM   GCSP  V+Y  ++    K K++ +  D+  +MV+
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY--- 366
                                   GC P+ VTY A+V+G C+ G + +A ++  ++    
Sbjct: 387 -----------------------AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423

Query: 367 -------------HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
                         H   PN V+Y A ++GLC   K   A E+++        PN I Y 
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++ G  + GK+  A +V  +M K G+ P+      LI  + ++G++D A K + + L  
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
            C  NVV +T++I G C+ G+ E+AL LL  M      P+ VTYT +ID L K G+++ +
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            +L  +M  KG  P  VTYR +I+  C  G ++    LL +M
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 222/460 (48%), Gaps = 43/460 (9%)

Query: 154 TKLCQGAK---RVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVA 208
           T LC   K     L     + +   P+ ++Y  L+ ++ +AG +  A ++   M+    +
Sbjct: 296 TFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS 355

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           P ++     IH  +   ++ +A     RM  AG  PN +TY  L+ G C    I  A ++
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415

Query: 269 IDEM-------------PLK---GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS- 311
             ++             P +     +P+ V+Y  ++  LCK  ++    +L++ M++   
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 312 -----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                      + F   G+I+ A+E+  QM++ G +P V TYT++++   + G LD A K
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L QM    C PN V+YTA ++GLC  G+S +A ++++  EE+  +PN +TY+ ++ GL 
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           + GK+  + D+  +M +KG  P  V   +LI  LC  G +D A+  + E         + 
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            +   I+GF +      +L +L++M      P    Y  +ID  SK GR+E A EL  +M
Sbjct: 656 GYRCAIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713

Query: 541 LSKGLVPTVV-----TYRTVIHRYCQVGRVEDLLKLLEKM 575
           +    VP+ V      Y ++I   C   +VE+  +L  +M
Sbjct: 714 ME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEM 750



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 239/533 (44%), Gaps = 38/533 (7%)

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
           ++++     A     AM  L  M+  +  PN++   T +   +   +L    R +  M  
Sbjct: 111 THMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMT 170

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK- 298
            G  PN   +N L+  YC+      A KL++ M   GC P  V Y   +G +C ++++  
Sbjct: 171 EGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPS 230

Query: 299 -EVRDLMEKM-------------VNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVT 341
            ++ DL EK+             VN +N        G+ ++A +L+ +M + G +PD  T
Sbjct: 231 PDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTST 290

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y+ V+   C   ++++A  + Q+M   G  P+  +YT  ++  C  G   +A+ +     
Sbjct: 291 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 350

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
               +P  +TY+ ++H   +  ++ +A D+   MV  G  P  V    L+  LC+ G + 
Sbjct: 351 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 410

Query: 462 GA---------------KKFMQECLNKGC-AVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
            A                 F   C ++   A NVV + +L+ G C+   ++ A  LLD M
Sbjct: 411 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 470

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                +P+ + Y  +ID   K G+++ A E+ ++M   G +P+V TY ++I R  + GR+
Sbjct: 471 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 530

Query: 566 EDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           +  +K+L +ML K  C      Y  +I+ LC  G  E+A K+L  +       +  T   
Sbjct: 531 DLAMKVLSQML-KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 589

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           L++     G   L+  +  +M  +   P+    + +   L   G  ++A  L+
Sbjct: 590 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL 642



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 223/493 (45%), Gaps = 54/493 (10%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A ++++ M R+G       +S ++     A K+  A  +   M+   V P++      I 
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A    E M+  G +P V+TY  LI  Y    ++  A  +   M   GC P
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 391

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFHDQGRIEEAKELVNQMSQMG 334
           + V+Y  ++  LCK   I +  ++  K++      DS+ +      E+   L        
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP---CEDRHTLA------- 441

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P+VVTY A+V+G C+  ++D A ++L  M   GC+PN + Y A ++G C  GK   A+
Sbjct: 442 --PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E+     +  + P+  TY+ ++  + ++G+L  A  V+ +M+K    P  V    +I  L
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CR G+ + A K +     KGC+ NVV +T+LI G  + G ++ +L L   M      P+ 
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619

Query: 515 VTYTTIIDALSKNGRVEEATELM--MK-------------------------------ML 541
           VTY  +I+ L   G +++A  L+  MK                               M 
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 679

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML----SKQKCRTAYNQVIENLCSFGY 597
           S G VP    Y  +I  + + GR+E  ++L ++M+    S +     Y  +I+ LC    
Sbjct: 680 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQ 739

Query: 598 LEEAGKILGKVLR 610
           +EEA ++  ++ R
Sbjct: 740 VEEAFRLYSEMTR 752



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 136/574 (23%), Positives = 248/574 (43%), Gaps = 50/574 (8%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           + + YR   + Y  ++++LS         RV + M+  G             A  + G+ 
Sbjct: 32  KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRW 91

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            +A   L M+++     + ++C   I  L+  +   +A+ FL RM+     PNV+TY  L
Sbjct: 92  ADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL 148

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           + G+    ++    ++I+ M  +GC+P+   + +++   C EK                 
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY------------- 195

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL------DQAKKMLQQMY 366
                     A +L+N+M+  GC P  V Y   +   C   +L      D A+K+  +M 
Sbjct: 196 ----------AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 245

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
              C  N V+   F   LC  GK  +A ++I     + + P+  TYS V+  L    K+ 
Sbjct: 246 AANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVE 305

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A  + +EM   G  P      +LI S C+ G ++ A+   +E  + GC+  VV +T+LI
Sbjct: 306 KAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 365

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG-- 544
             + +   + +A  +   M      P+ VTY  ++D L K G + +A E+  K++     
Sbjct: 366 HAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS 425

Query: 545 --------------LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQV 588
                         L P VVTY  ++   C+  +V+   +LL+ MLS   +     Y+ +
Sbjct: 426 ADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDAL 485

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I+  C  G ++ A ++  ++ +        T   L++     G   LA KV  +M   + 
Sbjct: 486 IDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC 545

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            P++     + + L   G+SE+A  L+    E+G
Sbjct: 546 TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 579



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 179/401 (44%), Gaps = 37/401 (9%)

Query: 127 FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY 186
           F++  + +     + + Y  +++ L K      A  +L  M   G E     +  L+  +
Sbjct: 430 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 489

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
            +AGK+ +A  V   M K    P++    + I  +    +L  A++ L +M     TPNV
Sbjct: 490 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNV 549

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           +TY  +I G C +   + A+KL+  M  KGCSP+ V+Y  ++  L K             
Sbjct: 550 VTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGK------------- 596

Query: 307 MVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                      G+I+ + +L  QMS+ GC P+ VTY  ++N  C  G LD+A+ +L +M 
Sbjct: 597 ----------AGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 646

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT-PNAITYSVVMHGLRREGKL 425
                     Y   + G     KS  A   I    E + T P A  Y +++    + G+L
Sbjct: 647 QTYWPKYLQGYRCAIQGF---SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRL 703

Query: 426 SEACDVVREMVKKGFFPTPVEIN-----LLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
             A ++ +EM++    P+ V+ +      LIQ+LC   +++ A +   E   +G    + 
Sbjct: 704 EIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELS 760

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            F  LI+G  +    +EAL L     +C +    ++YTT I
Sbjct: 761 VFVCLIKGLVEVKKWDEALQLCYG--ICHEVGLLLSYTTQI 799



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 145/400 (36%), Gaps = 110/400 (27%)

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           + +   G  P  VTY A+V      G++D   ++ ++M   G   +  +   F + LC  
Sbjct: 29  DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88

Query: 388 GKSLEAREMINTSEEEWWT--------------------------------PNAITYSVV 415
           G+  +A +MI   + +  T                                PN +TY  +
Sbjct: 89  GRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL 148

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK---------------- 459
           + G  ++ +L     ++  M+ +G  P P   N L+ S C E                  
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208

Query: 460 -------------------------MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
                                    +D A+K   E L   C +N VN  +  R  C  G 
Sbjct: 209 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 268

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
            ++A  L+ +M      PDT TY+ +I  L    +VE+A  L  +M   G+ P V TY  
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328

Query: 555 VIHRYCQVGRVEDLLKLLEKMLS--------------------KQ--------------K 580
           +I  +C+ G +E    L E+M S                    KQ               
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388

Query: 581 CR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           CR     Y  +++ LC  G + +A ++  K++ T+  AD+
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADS 428


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/498 (29%), Positives = 247/498 (49%), Gaps = 39/498 (7%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L +A  VL  ++ +  A + +  NT +        L  A R LE  + +G   NV+TY 
Sbjct: 134 RLADAERVLEALKTSGAA-DAVSHNTLVAGYCRDGSLWDAERVLEAARASGAA-NVVTYT 191

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI GYC   R+ DA++LI  MP+   +PD  +Y TV+  LC  K+ +E  +LM +M+ +
Sbjct: 192 ALIDGYCRSGRLTDALRLIASMPV---APDTYTYNTVLKGLCFAKQWEEAEELMREMIRN 248

Query: 311 S------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
           +              F   G ++ A EL+ QM + GC+PDVV Y+ +VNGF   G +D A
Sbjct: 249 NCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDA 308

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            K+L  M    C+PNTV Y A L GLC  G+  E  E+I     +   PN  T+S +++ 
Sbjct: 309 LKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINS 365

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L +      A +V+ +M K G+ P  V  N +I     +   D A K +   L   C  +
Sbjct: 366 LCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKPD 422

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT--VTYTTIIDALSKNGRVEEATEL 536
            ++F ++++  C+     +A  L+  M   K+D  T  +T+  +ID+L +NG+V++A E+
Sbjct: 423 TISFNAVLKCLCRAERWYDAAELMAKML--KEDCHTNEMTFNILIDSLCQNGQVKDAIEM 480

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLC 593
              M      P +VTY ++I+ + + G    L K+   +     CR    +YN  ++ LC
Sbjct: 481 FELMPKYRCTPDIVTYSSLINGFSEQG----LDKVAFDLFRSMPCRADIFSYNATLKGLC 536

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
                ++AG+++  ++      +  T ++L+ S   KG+   A +V  +M    + PD+ 
Sbjct: 537 MAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDI- 595

Query: 654 LCKKVSERLILEGKSEEA 671
                +   ++ G SE+ 
Sbjct: 596 ----FTYNALINGYSEQG 609



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 222/474 (46%), Gaps = 38/474 (8%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+RVL   AR         ++ L+  Y R+G+L +A+ +++ M    VAP+    NT + 
Sbjct: 172 AERVLE-AARASGAANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLK 227

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    +  +A   +  M      PN +T+   I+ +C    +  A++L+++MP  GC P
Sbjct: 228 GLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMP 287

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D V Y T++                       N F + GR+++A +L   +S M C P+ 
Sbjct: 288 DVVIYSTLV-----------------------NGFSEHGRVDDALKL---LSTMLCRPNT 321

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           V Y A + G C  G  D+  +++ +M    C PN  +++  +N LC N  +  A E++  
Sbjct: 322 VCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQ 381

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
            ++  + P+ ++Y+ ++     +    +A  ++  M+ K   P  +  N +++ LCR  +
Sbjct: 382 MQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCK---PDTISFNAVLKCLCRAER 438

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
              A + M + L + C  N + F  LI   CQ G +++A+ + + M   +  PD VTY++
Sbjct: 439 WYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSS 498

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +I+  S+ G  + A +L   M  +     + +Y   +   C   R +D  +L+  M++K 
Sbjct: 499 LINGFSEQGLDKVAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTKD 555

Query: 580 --KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
                  +N +I +LC  G +  A ++  ++ +     D  T + L+  Y  +G
Sbjct: 556 CLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQG 609



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 227/462 (49%), Gaps = 26/462 (5%)

Query: 163 VLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
            LRL+A   +   P+ ++Y  ++     A +   A  ++  M +    PN +   T I  
Sbjct: 206 ALRLIASMPVA--PDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRA 263

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
                 L +A+  LE+M   G  P+V+ Y+ L+ G+ +  R+ DA+KL+  M    C P+
Sbjct: 264 FCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTM---LCRPN 320

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMV------ND---SNLFHD--QGRIEE-AKELVN 328
            V Y   +  LC   R  EV +L+ +MV      ND   S L +   Q R+ E A E++ 
Sbjct: 321 TVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLE 380

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           QM + G +PDVV+Y  +++ F      D A K+L  M    CKP+T+S+ A L  LC   
Sbjct: 381 QMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAE 437

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  +A E++    +E    N +T+++++  L + G++ +A ++   M K    P  V  +
Sbjct: 438 RWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYS 497

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            LI     +G    A    +   +  C  ++ ++ + ++G C     ++A  L+ DM   
Sbjct: 498 SLINGFSEQGLDKVAFDLFR---SMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTK 554

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P+ VT+  +I++L + G V  A E+  +M   G+ P + TY  +I+ Y + G ++D 
Sbjct: 555 DCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDA 614

Query: 569 LKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           LK L  M  +     +YN +++ LC     ++A K++ ++LR
Sbjct: 615 LKFLSTMPCEPD-TISYNSILKGLCRAERWKDAEKLVTEMLR 655



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 212/452 (46%), Gaps = 24/452 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  +L+ L   K  + A+ ++R M R         F+  + A+ + G L  A+ +L
Sbjct: 218 DTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELL 277

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M K    P+++I +T ++      ++  AL+ L  M      PN + YN  +KG C  
Sbjct: 278 EQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIA 334

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------ 313
            R  +  +LI EM  K C P+  ++ T++  LC+ +  +   +++E+M     +      
Sbjct: 335 GRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSY 394

Query: 314 ------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                 F +Q   ++A +L+N M    C PD +++ AV+   CR      A +++ +M  
Sbjct: 395 NTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLK 451

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
             C  N +++   ++ LC NG+  +A EM     +   TP+ +TYS +++G   +G    
Sbjct: 452 EDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKV 511

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A D+ R M  +         N  ++ LC   + D A + + + + K C  N V F  LI 
Sbjct: 512 AFDLFRSMPCRADI---FSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILIN 568

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
             CQKG +  A+ + + M      PD  TY  +I+  S+ G +++A + +  M  +   P
Sbjct: 569 SLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPCE---P 625

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
             ++Y +++   C+  R +D  KL+ +ML K 
Sbjct: 626 DTISYNSILKGLCRAERWKDAEKLVTEMLRKN 657



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 146/295 (49%), Gaps = 14/295 (4%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P V+T   ++   C    L  A+++L+ +   G   + VS+   + G C +G   +A  +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +  +       N +TY+ ++ G  R G+L+   D +R +      P     N +++ LC 
Sbjct: 176 LEAARASG-AANVVTYTALIDGYCRSGRLT---DALRLIASMPVAPDTYTYNTVLKGLCF 231

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM--YLCKKDPDT 514
             + + A++ M+E +   C  N V F + IR FCQ G L+ A+ LL+ M  Y C   PD 
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCM--PDV 289

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           V Y+T+++  S++GRV++A +L+  ML +   P  V Y   +   C  GR +++ +L+ +
Sbjct: 290 VIYSTLVNGFSEHGRVDDALKLLSTMLCR---PNTVCYNAALKGLCIAGRWDEVGELIAE 346

Query: 575 MLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           M+ K        ++ +I +LC     E A ++L ++ +     D  + + ++  +
Sbjct: 347 MVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCF 401



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 25/294 (8%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           +++ Y  D + Y  ++   S+      A ++L  M      C+P+  S+  ++    RA 
Sbjct: 383 QKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML-----CKPDTISFNAVLKCLCRAE 437

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +  +A  +++ M K     N +  N  I  L    ++  A+   E M     TP+++TY+
Sbjct: 438 RWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYS 497

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI G+ +    K A  L   MP   C  D  SY   +  LC   R  +  +L+  MV  
Sbjct: 498 SLINGFSEQGLDKVAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTK 554

Query: 311 S------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                        N    +G +  A E+  QM + G  PD+ TY A++NG+   G LD A
Sbjct: 555 DCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDA 614

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
            K L  M    C+P+T+SY + L GLC   +  +A +++     +  TPN +T+
Sbjct: 615 LKFLSTM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 11/169 (6%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           Q  ++VA   F    R    R D   Y   L+ L        A  ++  M  +  +C P 
Sbjct: 506 QGLDKVAFDLF----RSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTK--DCLPN 559

Query: 178 --AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
              F+ L+ +  + G +  A+ V   M K  + P++   N  I+       L  AL+FL 
Sbjct: 560 EVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLS 619

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            M      P+ ++YN ++KG C   R KDA KL+ EM  K C+P++V++
Sbjct: 620 TMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 92/197 (46%), Gaps = 3/197 (1%)

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           V+    LI+  C +  L +A  +L+ +       D V++ T++    ++G + +A  ++ 
Sbjct: 119 VITCNILIKKLCARRRLADAERVLEALKT-SGAADAVSHNTLVAGYCRDGSLWDAERVLE 177

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYL 598
              + G    VVTY  +I  YC+ GR+ D L+L+  M       T YN V++ LC     
Sbjct: 178 AARASG-AANVVTYTALIDGYCRSGRLTDALRLIASMPVAPDTYT-YNTVLKGLCFAKQW 235

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           EEA +++ +++R     +  T    + ++   G+   A ++  +M     +PD+ +   +
Sbjct: 236 EEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTL 295

Query: 659 SERLILEGKSEEADTLM 675
                  G+ ++A  L+
Sbjct: 296 VNGFSEHGRVDDALKLL 312


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 254/555 (45%), Gaps = 33/555 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
            VY  M+  L KT   + A+ +  +MA RG+      ++ L+  + R  KL  A Y  + 
Sbjct: 366 FVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNK 425

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  ++  +   N+ I+      K+  A    + M   G+ P V TY  LI GYC    
Sbjct: 426 MIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGL 485

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +  A KL  EM  KG +P+ V++  ++  LC+              +N         ++ 
Sbjct: 486 VPKAFKLYHEMTGKGIAPNTVTFTALICGLCQ--------------IN---------KMA 522

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA +L ++M ++  +P+ VTY  ++ G CR G   +A ++L +M   G  P+T +Y   +
Sbjct: 523 EASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLI 582

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
            GLC  G+  EA+E IN    +    + + Y+ ++ G  +EG++ EA    +EMV +G  
Sbjct: 583 AGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRG-- 640

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECL----NKGCAVNVVNFTSLIRGFCQKGDLEE 497
              ++++L+  ++   G ++   + + E L     KG   + V +T LI GF + G+L++
Sbjct: 641 ---LQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKK 697

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A      M      P++VTYT +++ L K G V EA  L  +ML    +P  +TY   + 
Sbjct: 698 AFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLD 757

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRT-AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
              + G +E+ L+L   ML      T  YN +I   C  G  +EA K+L  ++      D
Sbjct: 758 HLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPD 817

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
             T    +  Y  +G    A  +   M  R L PD  +   +     L G+ + A  L  
Sbjct: 818 CITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRN 877

Query: 677 RFVERGHIQPKSEEH 691
             + RG    +S  H
Sbjct: 878 DMMLRGLKPTQSTYH 892



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 147/575 (25%), Positives = 267/575 (46%), Gaps = 17/575 (2%)

Query: 128 FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS 187
           F+ + +++++      + M+++   + K       V+ LM   G+       S L+ A +
Sbjct: 143 FFESYKKYKFSSSS-GFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALA 201

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R  K R  + +   +  A V P+  I    +  L       KA   + + +  G + +++
Sbjct: 202 RIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIV 261

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN  I G C   R+ +A+++   +  KG   D V+Y T++  LC+ +  +   ++M++M
Sbjct: 262 TYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEM 321

Query: 308 VN---------DSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           +           S L       G IE A EL+N++ ++G +P++  Y +++N  C+ G+L
Sbjct: 322 IELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKL 381

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           ++A+ +   M   G  PN V+YT  ++G     K   A    N   E   +    +Y+ +
Sbjct: 382 EEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSM 441

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           ++   + GK+  A  + +EMV KG  PT      LI   C++G +  A K   E   KG 
Sbjct: 442 INCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGI 501

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
           A N V FT+LI G CQ   + EA  L D+M   K  P+ VTY  +I+   + G    A E
Sbjct: 502 APNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFE 561

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK--CRTAYNQVIENLC 593
           L+ +M+ KGL P   TYR +I   C  GRV +  + +  +  K +      Y  +++  C
Sbjct: 562 LLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFC 621

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
             G ++EA     +++    + D  +  VL+   LN+   +L +++   M  + + PD  
Sbjct: 622 KEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRIL-FELLREMHGKGMQPDNV 680

Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           +   + +  I  G  ++A       +  G++ P S
Sbjct: 681 IYTILIDGFIKSGNLKKAFEFWYIMIGEGYV-PNS 714



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 157/635 (24%), Positives = 290/635 (45%), Gaps = 40/635 (6%)

Query: 87  LRSAWSPKLEGELRNLLRSLKPRQICAVL-RSQADERVALQFFYWADRQWRYRHDPIVYY 145
           +R   S K+     ++  +++P  +  VL R+  D R+AL+FF +      + H    + 
Sbjct: 48  VRGNQSWKIAFNNSSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFC 107

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIE-----------------CRPEAFSYLMVAYSR 188
           +++  L +  L   A  +L+ +  RG+                       F  L+  Y +
Sbjct: 108 ILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQ 167

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
             ++ + + V+++M+   + P +   +  ++ L    K  + L   + +  AG+ P+   
Sbjct: 168 NKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYI 227

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV----RDLM 304
           Y  ++K  C+L     A ++I++    GCS   V+Y   +  LCK KR+ E     R L 
Sbjct: 228 YTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLG 287

Query: 305 EK-----MVNDSNLFHDQGRIEE---AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
           EK     +V    L     RI+E     E++++M ++G +P     + ++ G  ++G ++
Sbjct: 288 EKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIE 347

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
            A ++L ++   G  PN   Y + +N LC  GK  EA  + +   E    PN +TY++++
Sbjct: 348 GAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILI 407

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            G  R  KL  A     +M++ G   T    N +I   C+ GKM  A+   +E ++KG  
Sbjct: 408 DGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLK 467

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
             V  +TSLI G+C+ G + +A  L  +M      P+TVT+T +I  L +  ++ EA++L
Sbjct: 468 PTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKL 527

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN--QVIENLCS 594
             +M+   ++P  VTY  +I  +C+ G      +LL++M+ K      Y    +I  LCS
Sbjct: 528 FDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCS 587

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            G + EA + +  +     + D      L++ +  +G    A      M  R L  DL  
Sbjct: 588 TGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDL-- 645

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERGH---IQP 686
              VS  +++ G   + D ++   +   H   +QP
Sbjct: 646 ---VSYAVLISGALNQNDRILFELLREMHGKGMQP 677



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 206/452 (45%), Gaps = 47/452 (10%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+ + + M  +G++     ++ L+  Y + G +  A  +   M    +APN +     I 
Sbjct: 454 AELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALIC 513

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L   NK+A+A +  + M    I PN +TYN LI+G+C       A +L+DEM  KG SP
Sbjct: 514 GLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSP 573

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAK--- 324
           D  +Y  ++  LC   R+ E ++ +  + +                F  +GRI+EA    
Sbjct: 574 DTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVAR 633

Query: 325 -------------------------------ELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
                                          EL+ +M   G  PD V YT +++GF + G
Sbjct: 634 QEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSG 693

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            L +A +    M   G  PN+V+YTA +NGL   G   EA+ +          PN ITY 
Sbjct: 694 NLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYG 753

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
             +  L +EG +  A  +   M++ G F   V  N+LI+  C+ GK   A K +   +  
Sbjct: 754 CFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGI 812

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   + + +++ I  +C++G+++ A+ + + M      PD V +  +I A   NG ++ A
Sbjct: 813 GMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRA 872

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
            +L   M+ +GL PT  TY +++ +  Q  R+
Sbjct: 873 LQLRNDMMLRGLKPTQSTYHSLMVQLAQRARL 904



 Score = 39.7 bits (91), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 4/116 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           + + Y +++    +    Q A ++L +M   GI   P+  +Y   +  Y + G +  AM 
Sbjct: 782 NTVTYNILIRGYCQIGKFQEAAKLLDVMI--GIGMVPDCITYSTFIYEYCKRGNVDAAMD 839

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
           +   M +  + P+ ++ N  IH   +  +L +AL+    M L G+ P   TY+ L+
Sbjct: 840 MWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 237/486 (48%), Gaps = 15/486 (3%)

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
           + LM  Y + G L +A+ +   M +  + PN +     I        + KA     +M+ 
Sbjct: 333 TTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN 392

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
             I+P V   N LI+GY      ++A KL DE    G + +  +Y +++ +LCKE ++ E
Sbjct: 393 KDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSE 451

Query: 300 VRDLMEKMV-----------NDSNLFH-DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
              + EKMV           N+  L H  QG ++ A  +  +M + G  P+++TY+ +++
Sbjct: 452 ACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMD 511

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G+ + G+ + A  +  +M      P+  +    +NGLC  G++ E+++ +    +E + P
Sbjct: 512 GYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIP 571

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
             +TY+ ++ G  +EG ++ A  V  EM K G  P       LI   C+   MD A K M
Sbjct: 572 TCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVM 631

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            E  NKG  ++V  + +LI GFC+KGD+  A  LL ++      P+ V Y+++I    K 
Sbjct: 632 DEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKL 691

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAY 585
             +E A  L  +M+++G+   +  Y T+I    + G++    +L  +ML+K        Y
Sbjct: 692 QNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITY 751

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           + +I  LC+ G LE A KIL  + R          + L+  +  +G    A+++   M +
Sbjct: 752 SVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLD 811

Query: 646 RNLIPD 651
           + L+PD
Sbjct: 812 KGLVPD 817



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 152/578 (26%), Positives = 256/578 (44%), Gaps = 89/578 (15%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++E + K      A  +LR M  +G       F+ ++    + GK+  A+ V 
Sbjct: 258 DARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVK 317

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY---------- 249
             M       N+++  T +        L  AL   ++M   GI PN +TY          
Sbjct: 318 GEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKN 377

Query: 250 -------------------------NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
                                    N LI+GY      ++A KL DE    G + +  +Y
Sbjct: 378 GNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTY 436

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMV-----------NDSNLFH-DQGRIEEAKELVNQMSQ 332
            +++ +LCKE ++ E   + EKMV           N+  L H  QG ++ A  +  +M +
Sbjct: 437 NSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLE 496

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G  P+++TY+ +++G+ + G+ + A  +  +M      P+  +    +NGLC  G++ E
Sbjct: 497 KGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSE 556

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           +++ +    +E + P  +TY+ ++ G  +EG ++ A  V  EM K G  P       LI 
Sbjct: 557 SQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLIN 616

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
             C+   MD A K M E  NKG  ++V  + +LI GFC+KGD+  A  LL ++      P
Sbjct: 617 GFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSP 676

Query: 513 DTVT-----------------------------------YTTIIDALSKNGRVEEATELM 537
           + V                                    YTT+I  L K G++  A+EL 
Sbjct: 677 NKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELY 736

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA----YNQVIENLC 593
            +ML+KG++P ++TY  +IH  C  G++E+  K+LE M   +KC T     YN +I    
Sbjct: 737 AEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDM--DRKCMTPTVFIYNTLITGHF 794

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
             G L+EA ++  ++L      D +T  +LV   +  G
Sbjct: 795 KEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDG 832



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 184/401 (45%), Gaps = 49/401 (12%)

Query: 179 FSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           F+Y  L+    + GK+  A  +   M +  V P+++  N  I        +  A      
Sbjct: 434 FTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVE 493

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M   G+ PN++TY+ L+ GY      + A  L D M  +  +P   +   ++  LCK  R
Sbjct: 494 MLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGR 553

Query: 297 IKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
             E +D ++K+V +  +            F  +G +  A  +  +M ++G  P+V TYT 
Sbjct: 554 TSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTN 613

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++NGFC+   +D A K++ +M + G + +   Y A ++G C  G  + A ++++  +E  
Sbjct: 614 LINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVG 673

Query: 405 WTPNAITYSVVMHGLR-----------------------------------REGKLSEAC 429
            +PN + YS ++ G R                                   +EGKL  A 
Sbjct: 674 LSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFAS 733

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           ++  EM+ KG  P  +  ++LI  LC +G+++ A+K +++   K     V  + +LI G 
Sbjct: 734 ELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGH 793

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
            ++G+L+EA  L ++M      PD  TY  +++   K+G +
Sbjct: 794 FKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 188/452 (41%), Gaps = 54/452 (11%)

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           +N L+  Y    RI DA+   + +  K   P        +  L K   I+E RD+  KM 
Sbjct: 157 FNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMA 216

Query: 309 NDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
           +                   +G++EEA+    +    G   D   Y+ V+   C+  +  
Sbjct: 217 SKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSV 276

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA----REMINTSEEEWWTPNAITY 412
            A  +L++M   G  P+ V +T  +      GK LEA     EM++  +      N +  
Sbjct: 277 AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPM----NVVVA 332

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           + +M G  ++G L  A ++  +M + G  P  V   ++I+  C+ G MD A +   +  N
Sbjct: 333 TTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN 392

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           K  +  V N  SLIRG+ +    EEA  L D+   C    +  TY +++  L K G++ E
Sbjct: 393 KDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSE 451

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENL 592
           A  +  KM+ KG+ P+VV+Y  +I  +CQ G                             
Sbjct: 452 ACSIWEKMVRKGVRPSVVSYNNMILGHCQQGD---------------------------- 483

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
                ++ A  +  ++L    K +  T  VL++ Y  KG    A+ +  RM   N+ P  
Sbjct: 484 -----MDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSD 538

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
             C  +   L   G++ E+   + + V+ G I
Sbjct: 539 FTCNIIINGLCKAGRTSESQDRLKKLVQEGFI 570



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 131/265 (49%), Gaps = 16/265 (6%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P   +Y  ++  + + G + +A+ V + M K  V+PN+      I+     N +  AL+ 
Sbjct: 571 PTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKV 630

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           ++ M+  GI  +V  Y  LI G+C    + +A +L+ E+   G SP+KV Y +++    K
Sbjct: 631 MDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRK 690

Query: 294 EKRIKEVRDLMEKMVND-------------SNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
            + ++    L ++M+N+             S L   +G++  A EL  +M   G +PD++
Sbjct: 691 LQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLK-EGKLLFASELYAEMLAKGIMPDLI 749

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TY+ +++G C  G+L+ A+K+L+ M      P    Y   + G    G   EA  + N  
Sbjct: 750 TYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEM 809

Query: 401 EEEWWTPNAITYSVVMHGLRREGKL 425
            ++   P+  TY ++++G  ++G L
Sbjct: 810 LDKGLVPDDTTYDILVNGKVKDGNL 834


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 241/488 (49%), Gaps = 16/488 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ A ++  K    + +   MQ+  +   L   N  I+     ++++ AL  L +M 
Sbjct: 50  FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 109

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+++T + L+ GYC   RI DA+ L+D+M   G  PD +++ T++  L    +  
Sbjct: 110 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 169

Query: 299 EVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           E   L+++MV               N    +G  + A  L+N+M       DVV +  ++
Sbjct: 170 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 229

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C+   +D A  + ++M   G +PN V+Y++ ++ LC  G+  +A ++++   E+   
Sbjct: 230 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 289

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN +T++ ++    +EGK  EA  +  +M+K+   P     N L+   C   ++D AK+ 
Sbjct: 290 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 349

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +  ++K C  +VV + +LI+GFC+   +E+   L  +M       DTVTYTT+I  L  
Sbjct: 350 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 409

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--- 583
           +G  + A ++  +M+S G+ P ++TY  ++   C  G++E  L++ + M  K + +    
Sbjct: 410 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIY 468

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            Y  +IE +C  G +++   +   +     K +  T + ++    +K +   AY +  +M
Sbjct: 469 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 528

Query: 644 FNRNLIPD 651
                +P+
Sbjct: 529 KEDGPLPN 536



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 222/449 (49%), Gaps = 12/449 (2%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           H    Y +++    +      A  +L  M + G E      S L+  Y    ++ +A+ +
Sbjct: 80  HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 139

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +  M +    P+ +   T IH L + NK ++A+  ++RM   G  PN++TY  ++ G C 
Sbjct: 140 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 199

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VN 309
                 A+ L+++M       D V + T++  LCK + + +  +L ++M         V 
Sbjct: 200 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 259

Query: 310 DSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            S+L       GR  +A +L++ M +    P++VT+ A+++ F + G+  +A+K+   M 
Sbjct: 260 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 319

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                P+  +Y + +NG C + +  +A++M      +   P+ +TY+ ++ G  +  ++ 
Sbjct: 320 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 379

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +  ++ REM  +G     V    LIQ L  +G  D A+K  ++ ++ G   +++ ++ L+
Sbjct: 380 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 439

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C  G LE+AL + D M   +   D   YTT+I+ + K G+V++  +L   +  KG+ 
Sbjct: 440 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 499

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           P VVTY T+I   C    +++   LL+KM
Sbjct: 500 PNVVTYNTMISGLCSKRLLQEAYALLKKM 528



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 209/443 (47%), Gaps = 25/443 (5%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           KL +A+ +   M K+   P+++  N  +  +    K    +   E+MQ   I   + TYN
Sbjct: 27  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI  +C   +I  A+ L+ +M   G  P  V+  +++   C  KRI             
Sbjct: 87  ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI------------- 133

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                      +A  LV+QM +MG  PD +T+T +++G     +  +A  ++ +M   GC
Sbjct: 134 ----------SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 183

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +PN V+Y   +NGLC  G +  A  ++N  E      + + ++ ++  L +   + +A +
Sbjct: 184 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 243

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           + +EM  KG  P  V  + LI  LC  G+   A + + + + K    N+V F +LI  F 
Sbjct: 244 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 303

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           ++G   EA  L DDM     DPD  TY ++++    + R+++A ++   M+SK   P VV
Sbjct: 304 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 363

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKV 608
           TY T+I  +C+  RVED  +L  +M  +        Y  +I+ L   G  + A K+  ++
Sbjct: 364 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 423

Query: 609 LRTASKADASTCHVLVESYLNKG 631
           +      D  T  +L++   N G
Sbjct: 424 VSDGVPPDIMTYSILLDGLCNNG 446



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 207/422 (49%), Gaps = 20/422 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           YR D I +  ++  L        A  ++  M +RG  C+P   +Y +V     + G    
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDTDL 205

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +L+ M+ A +  +++I NT I  L     +  AL   + M+  GI PNV+TY+ LI 
Sbjct: 206 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 265

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DS 311
             C   R  DA +L+ +M  K  +P+ V++  ++    KE +  E   L + M+    D 
Sbjct: 266 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 325

Query: 312 NLF-----------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
           ++F           HD  R+++AK++   M    C PDVVTY  ++ GFC+   ++   +
Sbjct: 326 DIFTYNSLVNGFCMHD--RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 383

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           + ++M H G   +TV+YT  + GL H+G    A+++      +   P+ +TYS+++ GL 
Sbjct: 384 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 443

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
             GKL +A +V   M K            +I+ +C+ GK+D           KG   NVV
Sbjct: 444 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 503

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + ++I G C K  L+EA +LL  M      P++ TY T+I A  ++G    + EL+ +M
Sbjct: 504 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 563

Query: 541 LS 542
            S
Sbjct: 564 RS 565



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 207/430 (48%), Gaps = 18/430 (4%)

Query: 259 LHRIK--DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
           LH +K  DAI L   M      P  V +  ++  + K K+   V  L EKM         
Sbjct: 23  LHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 82

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  N F  + +I  A  L+ +M ++G  P +VT ++++NG+C    +  A  ++ Q
Sbjct: 83  YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 142

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G +P+T+++T  ++GL  + K+ EA  +++   +    PN +TY VV++GL + G 
Sbjct: 143 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 202

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
              A +++ +M         V  N +I SLC+   +D A    +E   KG   NVV ++S
Sbjct: 203 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 262

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI   C  G   +A  LL DM   K +P+ VT+  +IDA  K G+  EA +L   M+ + 
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 322

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEA 601
           + P + TY ++++ +C   R++   ++ E M+SK  C      YN +I+  C    +E+ 
Sbjct: 323 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD-CFPDVVTYNTLIKGFCKSKRVEDG 381

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
            ++  ++       D  T   L++   + G    A KV  +M +  + PD+     + + 
Sbjct: 382 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 441

Query: 662 LILEGKSEEA 671
           L   GK E+A
Sbjct: 442 LCNNGKLEKA 451



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 162/336 (48%), Gaps = 13/336 (3%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + + Y  ++  L        A ++L  M  + I      F+ L+ A+ + GK   A  
Sbjct: 254 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 313

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M K ++ P++   N+ ++   + ++L KA +  E M      P+V+TYN LIKG+C
Sbjct: 314 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 373

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              R++D  +L  EM  +G   D V+Y T++  L  +      + + ++MV+D       
Sbjct: 374 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 433

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 +   + G++E+A E+ + M +     D+  YT ++ G C+ G++D    +   +
Sbjct: 434 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 493

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G KPN V+Y   ++GLC      EA  ++   +E+   PN+ TY+ ++    R+G  
Sbjct: 494 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 553

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           + + +++REM    F      I  L+ ++  +G++D
Sbjct: 554 AASAELIREMRSCRFVGDASTIG-LVANMLHDGRLD 588



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 145/307 (47%), Gaps = 4/307 (1%)

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           NGL H+ K  +A  +     +    P+ + ++ ++  + +  K      +  +M +    
Sbjct: 21  NGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIV 79

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
                 N+LI   CR  ++  A   + + +  G   ++V  +SL+ G+C    + +A++L
Sbjct: 80  HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 139

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           +D M      PDT+T+TT+I  L  + +  EA  L+ +M+ +G  P +VTY  V++  C+
Sbjct: 140 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 199

Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G  +  L LL KM +   +     +N +I++LC + ++++A  +  ++     + +  T
Sbjct: 200 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 259

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
              L+    + G    A ++   M  + + P+L     + +  + EGK  EA+ L    +
Sbjct: 260 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 319

Query: 680 ERGHIQP 686
           +R  I P
Sbjct: 320 KRS-IDP 325



 Score = 42.7 bits (99), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 7/195 (3%)

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
           ++  ++R       L++A+ L   M   +  P  V +  ++ A++K  + +    L  KM
Sbjct: 14  DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 73

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYL 598
               +V  + TY  +I+ +C+  ++   L LL KM  L  +      + ++   C    +
Sbjct: 74  QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 133

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
            +A  ++ +++    + D  T   L+           A  +  RM  R   P+L     V
Sbjct: 134 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL-----V 188

Query: 659 SERLILEGKSEEADT 673
           +  +++ G  +  DT
Sbjct: 189 TYGVVVNGLCKRGDT 203


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/545 (25%), Positives = 251/545 (46%), Gaps = 37/545 (6%)

Query: 88  RSAWSPKLEGELRNLLRSLKPRQICA-VLRSQADERVALQFFYWADRQWRYRHDPIVYYM 146
           +  WS     +L+ +++   P  +   +  S+A   + L +F W  +++   H+   +  
Sbjct: 58  KQHWS-----KLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCR 112

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV-----------------AYSRA 189
           +L +L+  K     + +L   A+         F  L V                 AY + 
Sbjct: 113 LLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKN 172

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G++  A+             + L CN  +  LV   ++       + M    I  NV+T+
Sbjct: 173 GEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTF 232

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           + +I G C + + + A  ++++M   G SP  ++Y T++   CK  ++ +   L+++MV 
Sbjct: 233 DVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVA 292

Query: 310 DS--------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                     N+  D       +  AK++  +M + G  P+VVTY +++NG C  G+LD+
Sbjct: 293 KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDE 352

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  +  +M   G KPN V+Y A +NG C      EAREM++   +    PN IT++ ++ 
Sbjct: 353 ALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLID 412

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
              + G++ +A  +   M+  G  P     N LI   CREG +  A+K  +E    G   
Sbjct: 413 AYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKA 472

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           ++V +  L+   C+KG+  +A+ LLD+M+    +P  +TY  +ID   + G    A  + 
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVR 532

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSF 595
             M  KG    +VTY  +I  +C  G++E+  +LL +ML K     RT Y+ + + +   
Sbjct: 533 TLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEK 592

Query: 596 GYLEE 600
           G++ +
Sbjct: 593 GFIPD 597



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 198/406 (48%), Gaps = 23/406 (5%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           V + M RR I      F  ++    + GK + A  V+  M+    +P+++  NT I    
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYC 275

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              K+ KA   L+ M    I PN +T+N LI G+C    +  A K+ +EM  +G  P+ V
Sbjct: 276 KAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVV 335

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           +Y +++  LC                         G+++EA  L ++MS MG  P+VVTY
Sbjct: 336 TYNSLINGLC-----------------------SNGKLDEALGLQDKMSGMGLKPNVVTY 372

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
            A++NGFC+   L +A++ML  +   G  PN +++   ++     G+  +A  + +   +
Sbjct: 373 NALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLD 432

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               PN  TY+ ++ G  REG + EA  + +EM   G     V  N+L+ +LC++G+   
Sbjct: 433 TGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRK 492

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A + + E    G   + + + +LI G+ ++G+   AL++   M    +  + VTY  +I 
Sbjct: 493 AVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIK 552

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
                G++EEA  L+ +ML KGL+P   TY  +     + G + D+
Sbjct: 553 GFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDI 598



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 193/383 (50%), Gaps = 2/383 (0%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +GRI   + +  +M +     +VVT+  V+NG C+VG+  +A  +++ M   G  P+ ++
Sbjct: 207 EGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVIT 266

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   ++G C  GK  +A  ++     +   PN IT+++++ G  R+  ++ A  V  EM 
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           ++G  P  V  N LI  LC  GK+D A     +    G   NVV + +LI GFC+K  L+
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           EA  +LDD+      P+ +T+ T+IDA  K GR+++A  L   ML  G+ P V TY  +I
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446

Query: 557 HRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
             +C+ G V++  KL ++M     +     YN +++ LC  G   +A ++L ++      
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLN 506

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
               T + L++ Y  +G    A  V   M  +    ++     + +    +GK EEA+ L
Sbjct: 507 PSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRL 566

Query: 675 MLRFVERGHIQPKSEEHLQRQRV 697
           +   +E+G I  ++   + R  +
Sbjct: 567 LNEMLEKGLIPNRTTYDILRDEM 589



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 179/361 (49%), Gaps = 12/361 (3%)

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           ++S + C P +V+         + G +   + + ++M       N V++   +NGLC  G
Sbjct: 191 RLSALSCNPMLVS-------LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVG 243

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K  +A +++   +   ++P+ ITY+ ++ G  + GK+ +A  +++EMV K   P  +  N
Sbjct: 244 KFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFN 303

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           +LI   CR+  +  AKK  +E   +G   NVV + SLI G C  G L+EAL L D M   
Sbjct: 304 ILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM 363

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P+ VTY  +I+   K   ++EA E++  +  +GL P V+T+ T+I  Y + GR++D 
Sbjct: 364 GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423

Query: 569 LKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
             L   ML    C   + YN +I   C  G ++EA K+  ++     KAD  T ++LV++
Sbjct: 424 FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA---DTLMLRFVERGH 683
              KG    A ++   MF   L P       + +    EG S  A    TLM +   R +
Sbjct: 484 LCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRAN 543

Query: 684 I 684
           I
Sbjct: 544 I 544



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 152/308 (49%), Gaps = 3/308 (0%)

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           GC  N++     +     NG+   A E  + + +  +  +A++ + ++  L +EG++   
Sbjct: 155 GC-ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVV 213

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             V +EM+++      V  +++I  LC+ GK   A   +++    G + +V+ + ++I G
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +C+ G + +A +LL +M   +  P+ +T+  +ID   ++  V  A ++  +M  +GL P 
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPN 333

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILG 606
           VVTY ++I+  C  G++++ L L +KM  +  +     YN +I   C    L+EA ++L 
Sbjct: 334 VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
            + +     +  T + L+++Y   G    A+ +   M +  + P++     +      EG
Sbjct: 394 DIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREG 453

Query: 667 KSEEADTL 674
             +EA  L
Sbjct: 454 NVKEARKL 461



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 2/252 (0%)

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
            W   N+I   +++    + G++  A +        GF  + +  N ++ SL +EG++  
Sbjct: 153 SWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGV 212

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
            +   +E + +   VNVV F  +I G C+ G  ++A  +++DM      P  +TY TIID
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QK 580
              K G++ +A  L+ +M++K + P  +T+  +I  +C+   V    K+ E+M  +  Q 
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               YN +I  LCS G L+EA  +  K+     K +  T + L+  +  K +   A ++ 
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 641 CRMFNRNLIPDL 652
             +  R L P++
Sbjct: 393 DDIGKRGLAPNV 404


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 227/473 (47%), Gaps = 31/473 (6%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L +A  R+G+L   ++      +   APN+   N  I  L    +LA+A     RM+  G
Sbjct: 165 LRLARDRSGRLVRRLF------EQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMG 218

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             P+V+T+N LI GY     + +  +L++EM   GC  D V+Y  ++   CK        
Sbjct: 219 CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK-------- 270

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                           GR+E A      M + G + +VVT++  V+ FC+ G + +A K+
Sbjct: 271 ---------------FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKL 315

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             QM   G   N  +YT  ++G C  G+  +A  +++    +    N +TY+V++ GL +
Sbjct: 316 FAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCK 375

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           E K++EA DV+R M K G     +    LI         + A   + E  NKG  +++  
Sbjct: 376 ERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISL 435

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           + +LI+G C    L+EA SLL  M     +P+ + YTT++DA  K+G+V EA  ++ K+L
Sbjct: 436 YGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKIL 495

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLE 599
             G  P V+TY  +I   C+ G +++ +    KM  L       AY  +++ LC  G L 
Sbjct: 496 DSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLN 555

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           EA ++  +++      D      L++ YL +G    A+ +  +M +  L  DL
Sbjct: 556 EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDL 608



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 210/421 (49%), Gaps = 12/421 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R G +     ++ L+  + + G++  A    + M++  V  N++  +T +        
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +A++   +M++ G+  N  TY CLI G C   R+ DAI L+DEM  +G   + V+Y  
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368

Query: 287 VMGYLCKEKRIKEVRD---LMEKMVNDSN------LFHDQ---GRIEEAKELVNQMSQMG 334
           ++  LCKE+++ E  D   +MEK    +N      L H        E+A  L+++M   G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
              D+  Y A++ G C V +LD+AK +L +M   G +PN + YT  ++    +GK  EA 
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            M+    +  + PN ITY  ++ GL + G + EA     +M   G  P       L+  L
Sbjct: 489 AMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGL 548

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G ++ A +   E ++KG +++ V +T+L+ G+ ++G+L +A +L   M       D 
Sbjct: 549 CKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDL 608

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
             YT  I        + EA E+  +M+  G+ P    Y  +I +Y ++G +E+ + L ++
Sbjct: 609 FCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDE 668

Query: 575 M 575
           M
Sbjct: 669 M 669



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 226/472 (47%), Gaps = 16/472 (3%)

Query: 176 PEAFSYLMVA--YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P  F++ +V     + G+L  A  + S M++    P+++  N+ I       +L +  + 
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           +E M+ +G   +V+TYN LI  +C   R++ A      M  +G   + V++ T +   CK
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 294 EKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKELVNQMSQMGCIPDVVT 341
           E  ++E   L  +M       ++             GR+++A  L+++M + G   +VVT
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           YT +V+G C+  ++ +A+ +L+ M   G + N + YT  ++G   N  S +A  +++  +
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
            +    +   Y  ++ GL    KL EA  ++ +M + G  P  +    ++ +  + GK+ 
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A   +Q+ L+ G   NV+ + +LI G C+ G ++EA+S  + M     DP+   YT ++
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--Q 579
           D L KNG + EA +L  +M+ KG+    V Y  ++  Y + G + D   L  KM+    Q
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
                Y   I   C+   + EA ++  +++      D +  + L+  Y   G
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLG 657



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 137/549 (24%), Positives = 251/549 (45%), Gaps = 33/549 (6%)

Query: 149 EILSKTKLCQGAKRVL-RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV 207
            +L++ +L   ++RVL RL+A R    RP       +A S    L  A   L   + A  
Sbjct: 73  HLLARDRLYAHSRRVLSRLVALR----RPH------LAASLVDLLHRAALALGPRRSALA 122

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
           +    + +T + VL     L  A+R + R++   + PN  T N ++         +   +
Sbjct: 123 S----VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRR 178

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHDQG 318
           L +++P    +P+  ++  V+ +LCKE  + E R L  +M         V  ++L    G
Sbjct: 179 LFEQLP----APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYG 234

Query: 319 R---IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
           +   ++E ++LV +M + GC  DVVTY A++N FC+ G ++ A      M   G   N V
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVV 294

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +++ F++  C  G   EA ++           N  TY+ ++ G  + G+L +A  ++ EM
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           V++G     V   +L+  LC+E K+  A+  ++     G   N + +T+LI G     + 
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           E+AL LL +M     + D   Y  +I  L    +++EA  L+ KM   GL P  + Y T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +    + G+V + + +L+K+L    Q     Y  +I+ LC  G ++EA     K+     
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             +      LV+     G    A ++   M ++ +  D  +   + +  + +G   +A  
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594

Query: 674 LMLRFVERG 682
           L  + ++ G
Sbjct: 595 LKAKMIDSG 603



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 23/298 (7%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + ++Y  ++      K  + A  +L  M  +G+E     +  L+       KL  A  
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L+ M ++ + PN +I  T +       K+ +A+  L+++  +G  PNV+TY  LI G C
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               I +AI   ++M   G  P+  +Y  ++  LCK                        
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK-----------------------N 551

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G + EA +L N+M   G   D V YTA+++G+ + G L  A  +  +M   G + +   Y
Sbjct: 552 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCY 611

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           T F++G C+     EARE+ +        P+   Y+ ++   ++ G L EA  +  EM
Sbjct: 612 TCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score = 46.6 bits (109), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 34/171 (19%), Positives = 77/171 (45%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           ++ + I Y  +++ L K      A      M   G++   +A++ L+    + G L  A+
Sbjct: 499 FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAV 558

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            + + M    ++ + ++    +   +    L  A     +M  +G+  ++  Y C I G+
Sbjct: 559 QLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGF 618

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           C+L+ + +A ++  EM   G +PD+  Y  ++    K   ++E   L ++M
Sbjct: 619 CNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 231/450 (51%), Gaps = 23/450 (5%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           NT +       +LA A R L   +  G   NV+TY  LI GYC   R+ DA++LI  MP+
Sbjct: 128 NTLVAGYCRDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASMPV 186

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEE 322
              +PD  +Y TV+  LC  K+ +E  +LM +M+ +               F   G ++ 
Sbjct: 187 ---APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDR 243

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A +L++QM + GC PDVV Y+ ++NGF   G +DQA  +L  M    CKPNTV Y A L 
Sbjct: 244 AVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALK 300

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC   +  +  E++     +  +PN  T+S+++  L +   +  A +V+ +M K G  P
Sbjct: 301 GLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEP 360

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V  N++I SL   G++D A + +   +   C  + + F ++++GFC+     +A  L+
Sbjct: 361 DTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELI 417

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
             M+        +T+  +ID L +NG V  AT++  +M      P +VTY ++++ + + 
Sbjct: 418 AQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQ 477

Query: 563 GRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           G VE  ++L   M  K     +YN V++ LC     E+AG+++ +++      +  T ++
Sbjct: 478 GLVEVAIQLFRSMPCKPDI-FSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNI 536

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           L+ S   KG+   A +V  +M N    PD+
Sbjct: 537 LINSLCQKGLVDRAIEVLEQMPNYGSTPDI 566



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 234/450 (52%), Gaps = 23/450 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ L+  Y R+G+L +A+ +++ M    VAP+    NT +  L +  K  +A   +  M 
Sbjct: 161 YTALIDGYCRSGRLDDALRLIASM---PVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMI 217

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
                PN +T+   I+ +C    +  A++L+D+MP  GC+PD V Y T++    ++  + 
Sbjct: 218 RNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVD 277

Query: 299 EVRDLMEKMVNDSNLFHDQG---------RIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
           +  DL+  M+   N               R E+  EL+ +M + GC P+  T++ +++  
Sbjct: 278 QALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSL 337

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+   +D A ++L+QM  +GC+P+TV+Y   +N L   G+  +A  ++N+   +   P+A
Sbjct: 338 CQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDA 394

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           + ++ V+ G  R  +  +A +++ +M +       +  N+LI  LC+ G ++ A +  ++
Sbjct: 395 LGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQ 454

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
                C  ++V ++SL+ GF ++G +E A+ L   M  CK  PD  +Y  ++  L +  R
Sbjct: 455 MPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP-CK--PDIFSYNAVLKGLCRAAR 511

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQ 587
            E+A EL+ +M+ K   P  VT+  +I+  CQ G V+  +++LE+M +         YN 
Sbjct: 512 WEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNA 571

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADA 617
           +I      G L++A K+L  +   + K DA
Sbjct: 572 LINGFSEQGRLDDALKLLSTM---SCKPDA 598



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 215/435 (49%), Gaps = 24/435 (5%)

Query: 136 RYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGK 191
           R R  P  + +   +    +  L   A ++L  M R G  C P+   +S L+  +S  G 
Sbjct: 218 RNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYG--CTPDVVIYSTLINGFSEQGH 275

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +  A+ +L+ M      PN +  N A+  L +  +       +  M   G +PN  T++ 
Sbjct: 276 VDQALDLLNTM---LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSM 332

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI   C  + +  A++++++M   GC PD V+Y  ++  L +  R+ +   L+  MV   
Sbjct: 333 LISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKP 392

Query: 312 NL---------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
           +          F    R  +A EL+ QM +  C    +T+  +++  C+ G ++ A ++ 
Sbjct: 393 DALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVF 452

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           +QM  + C P+ V+Y++ LNG    G    A ++  +   +   P+  +Y+ V+ GL R 
Sbjct: 453 EQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRA 509

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            +  +A +++ EMV K   P  V  N+LI SLC++G +D A + +++  N G   ++  +
Sbjct: 510 ARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTY 569

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            +LI GF ++G L++AL LL  M  CK  PD ++Y + +  L +  R ++A EL+ +ML 
Sbjct: 570 NALINGFSEQGRLDDALKLLSTMS-CK--PDAISYNSTLKGLCRAERWQDAEELVAEMLR 626

Query: 543 KGLVPTVVTYRTVIH 557
               P  VT++   H
Sbjct: 627 NKCTPNEVTFKYANH 641



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 9/259 (3%)

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           VS+   + G C +G+  +A  ++  +       N +TY+ ++ G  R G+L    D +R 
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGAARATG-AANVVTYTALIDGYCRSGRLD---DALRL 180

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           +      P     N +++ LC   K + A++ M E +   C  N V F + IR FCQ G 
Sbjct: 181 IASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           L+ A+ LLD M      PD V Y+T+I+  S+ G V++A +L+  ML K   P  V Y  
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYNA 297

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
            +   C   R ED+ +L+ +M+ K        ++ +I +LC    ++ A ++L ++ +  
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 613 SKADASTCHVLVESYLNKG 631
            + D    ++++ S   +G
Sbjct: 358 CEPDTVNYNIIINSLSERG 376


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 228/489 (46%), Gaps = 19/489 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +LR M R G    P AFSY  ++    RAG+  +A+ V   M + AV PN +  NT 
Sbjct: 179 AVGMLRRMGRDGAP-PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 237

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I   + G  L       ++M   G+ PN +TYN L+ G C   R+ +   L+DEM  +  
Sbjct: 238 IDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 297

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKE 325
            PD  +Y  +   L +    K +  L  K + +     D             G++  A+E
Sbjct: 298 VPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEE 357

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++  +   G +P  V Y  ++NG+C+ GEL+ A     QM     KP+ ++Y A +NGLC
Sbjct: 358 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 417

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
              +   A++++   ++    P   T++ ++    R G+L +   V+ EM + G  P  V
Sbjct: 418 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 477

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               ++ + C+ GK+  A   + +  +K    N   + ++I  + + G  ++A  L++ M
Sbjct: 478 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 537

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P  VTY  +I  L    ++ EA E++  + +  L+P  V+Y T+I   C  G +
Sbjct: 538 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 597

Query: 566 EDLLKLLEKMLS---KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           +  L L ++M     K   RT Y+Q+I  L   G L E   +  K+++       +  ++
Sbjct: 598 DKALDLQQRMHKYGIKSTVRT-YHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNI 656

Query: 623 LVESYLNKG 631
           +VE+Y   G
Sbjct: 657 MVEAYSKYG 665



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 222/477 (46%), Gaps = 33/477 (6%)

Query: 195 AMYVLSMMQKAAVAP--NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
           A+ +LS +   A AP  +L  CN  +  L+   + A   R    +  AG  P+   +N  
Sbjct: 107 ALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKA 166

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSP-DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           ++       + +A+ ++  M   G  P +  SY  V+  + +                  
Sbjct: 167 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRA----------------- 209

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 GR  +A E+ ++M++   +P+ +TY  +++G  + G+L+    +  QM  HG K
Sbjct: 210 ------GRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLK 263

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN ++Y   L+GLC  G+  E   +++    +   P+  TYS++  GL R G       +
Sbjct: 264 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSL 323

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             + +K G        ++L+  LC++GK+  A++ +Q  +N G     V + +LI G+CQ
Sbjct: 324 FGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 383

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G+LE A S    M      PD +TY  +I+ L K  R+  A +L+M+M   G+ PTV T
Sbjct: 384 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 443

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           + T+I  Y + G++E    +L +M     +    +Y  ++   C  G + EA  IL  + 
Sbjct: 444 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 503

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
                 +A   + ++++Y+  G    A+ +  +M +  + P +     V+  L+++G
Sbjct: 504 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI-----VTYNLLIKG 555



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 164/372 (44%), Gaps = 51/372 (13%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           + + I Y ++L  L +         +L  MA +  +  P+ F+Y  L    SR G  +  
Sbjct: 263 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQ--KMVPDGFTYSILFDGLSRNGDSKAM 320

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + +     K  V      C+  ++ L    K++ A   L+ +  AG+ P  + YN LI G
Sbjct: 321 LSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 380

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---- 311
           YC    ++ A     +M  +   PD ++Y  ++  LCK +RI   +DL+ +M ++     
Sbjct: 381 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 440

Query: 312 --------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   + +   G++E+   ++++M + G  P+VV+Y ++VN FC+ G++ +A  +L 
Sbjct: 441 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 500

Query: 364 QMYH-----------------------------------HGCKPNTVSYTAFLNGLCHNG 388
            M+H                                   +G  P+ V+Y   + GLC+  
Sbjct: 501 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 560

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EA E+IN+       P+A++Y+ ++      G + +A D+ + M K G   T    +
Sbjct: 561 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 620

Query: 449 LLIQSLCREGKM 460
            LI  L   G++
Sbjct: 621 QLISGLGGAGRL 632



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 144/308 (46%), Gaps = 26/308 (8%)

Query: 134 QWRYRH---DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
           Q + RH   D I Y  ++  L K +    A+ +L  M   G+    E F+ L+ AY R G
Sbjct: 396 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 455

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L     VLS MQ+  + PN++   + ++      K+ +A+  L+ M    + PN   YN
Sbjct: 456 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 515

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            +I  Y +      A  L+++M   G SP  V+Y  ++  LC                  
Sbjct: 516 AIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC------------------ 557

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                +Q +I EA+E++N +S    IPD V+Y  +++  C  G +D+A  + Q+M+ +G 
Sbjct: 558 -----NQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 612

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           K    +Y   ++GL   G+ +E   +     +    P+   +++++    + G   +A D
Sbjct: 613 KSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAED 672

Query: 431 VVREMVKK 438
           + +EM++K
Sbjct: 673 LRKEMLQK 680


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 241/488 (49%), Gaps = 16/488 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ A ++  K    + +   MQ+  +   L   N  I+     ++++ AL  L +M 
Sbjct: 88  FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+++T + L+ GYC   RI DA+ L+D+M   G  PD +++ T++  L    +  
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207

Query: 299 EVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           E   L+++MV               N    +G  + A  L+N+M       DVV +  ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C+   +D A  + ++M   G +PN V+Y++ ++ LC  G+  +A ++++   E+   
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN +T++ ++    +EGK  EA  +  +M+K+   P     N L+   C   ++D AK+ 
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +  ++K C  +VV + +LI+GFC+   +E+   L  +M       DTVTYTT+I  L  
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--- 583
           +G  + A ++  +M+S G+ P ++TY  ++   C  G++E  L++ + M  K + +    
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIY 506

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            Y  +IE +C  G +++   +   +     K +  T + ++    +K +   AY +  +M
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566

Query: 644 FNRNLIPD 651
                +P+
Sbjct: 567 KEDGPLPN 574



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 222/449 (49%), Gaps = 12/449 (2%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           H    Y +++    +      A  +L  M + G E      S L+  Y    ++ +A+ +
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +  M +    P+ +   T IH L + NK ++A+  ++RM   G  PN++TY  ++ G C 
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VN 309
                 A+ L+++M       D V + T++  LCK + + +  +L ++M         V 
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297

Query: 310 DSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            S+L       GR  +A +L++ M +    P++VT+ A+++ F + G+  +A+K+   M 
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                P+  +Y + +NG C + +  +A++M      +   P+ +TY+ ++ G  +  ++ 
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +  ++ REM  +G     V    LIQ L  +G  D A+K  ++ ++ G   +++ ++ L+
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C  G LE+AL + D M   +   D   YTT+I+ + K G+V++  +L   +  KG+ 
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           P VVTY T+I   C    +++   LL+KM
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKM 566



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 209/443 (47%), Gaps = 25/443 (5%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           KL +A+ +   M K+   P+++  N  +  +    K    +   E+MQ   I   + TYN
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI  +C   +I  A+ L+ +M   G  P  V+  +++   C  KRI             
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI------------- 171

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                      +A  LV+QM +MG  PD +T+T +++G     +  +A  ++ +M   GC
Sbjct: 172 ----------SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +PN V+Y   +NGLC  G +  A  ++N  E      + + ++ ++  L +   + +A +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           + +EM  KG  P  V  + LI  LC  G+   A + + + + K    N+V F +LI  F 
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           ++G   EA  L DDM     DPD  TY ++++    + R+++A ++   M+SK   P VV
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKV 608
           TY T+I  +C+  RVED  +L  +M  +        Y  +I+ L   G  + A K+  ++
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461

Query: 609 LRTASKADASTCHVLVESYLNKG 631
           +      D  T  +L++   N G
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNG 484



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 207/422 (49%), Gaps = 20/422 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           YR D I +  ++  L        A  ++  M +RG  C+P   +Y +V     + G    
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDTDL 243

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +L+ M+ A +  +++I NT I  L     +  AL   + M+  GI PNV+TY+ LI 
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DS 311
             C   R  DA +L+ +M  K  +P+ V++  ++    KE +  E   L + M+    D 
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363

Query: 312 NLF-----------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
           ++F           HD  R+++AK++   M    C PDVVTY  ++ GFC+   ++   +
Sbjct: 364 DIFTYNSLVNGFCMHD--RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           + ++M H G   +TV+YT  + GL H+G    A+++      +   P+ +TYS+++ GL 
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
             GKL +A +V   M K            +I+ +C+ GK+D           KG   NVV
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + ++I G C K  L+EA +LL  M      P++ TY T+I A  ++G    + EL+ +M
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601

Query: 541 LS 542
            S
Sbjct: 602 RS 603



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 207/430 (48%), Gaps = 18/430 (4%)

Query: 259 LHRIK--DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
           LH +K  DAI L   M      P  V +  ++  + K K+   V  L EKM         
Sbjct: 61  LHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 120

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  N F  + +I  A  L+ +M ++G  P +VT ++++NG+C    +  A  ++ Q
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G +P+T+++T  ++GL  + K+ EA  +++   +    PN +TY VV++GL + G 
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
              A +++ +M         V  N +I SLC+   +D A    +E   KG   NVV ++S
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI   C  G   +A  LL DM   K +P+ VT+  +IDA  K G+  EA +L   M+ + 
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEA 601
           + P + TY ++++ +C   R++   ++ E M+SK  C      YN +I+  C    +E+ 
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD-CFPDVVTYNTLIKGFCKSKRVEDG 419

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
            ++  ++       D  T   L++   + G    A KV  +M +  + PD+     + + 
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479

Query: 662 LILEGKSEEA 671
           L   GK E+A
Sbjct: 480 LCNNGKLEKA 489



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 165/343 (48%), Gaps = 15/343 (4%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + + Y  ++  L        A ++L  M  + I      F+ L+ A+ + GK   A  
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M K ++ P++   N+ ++   + ++L KA +  E M      P+V+TYN LIKG+C
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              R++D  +L  EM  +G   D V+Y T++  L  +      + + ++MV+D       
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 +   + G++E+A E+ + M +     D+  YT ++ G C+ G++D    +   +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G KPN V+Y   ++GLC      EA  ++   +E+   PN+ TY+ ++    R+G  
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 591

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
           + + +++REM    F      I  L+ ++  +G++D  K F+ 
Sbjct: 592 AASAELIREMRSCRFVGDASTIG-LVANMLHDGRLD--KSFLD 631



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 145/307 (47%), Gaps = 4/307 (1%)

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           NGL H+ K  +A  +     +    P+ + ++ ++  + +  K      +  +M +    
Sbjct: 59  NGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIV 117

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
                 N+LI   CR  ++  A   + + +  G   ++V  +SL+ G+C    + +A++L
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           +D M      PDT+T+TT+I  L  + +  EA  L+ +M+ +G  P +VTY  V++  C+
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237

Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G  +  L LL KM +   +     +N +I++LC + ++++A  +  ++     + +  T
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
              L+    + G    A ++   M  + + P+L     + +  + EGK  EA+ L    +
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357

Query: 680 ERGHIQP 686
           +R  I P
Sbjct: 358 KRS-IDP 363



 Score = 42.7 bits (99), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 7/195 (3%)

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
           ++  ++R       L++A+ L   M   +  P  V +  ++ A++K  + +    L  KM
Sbjct: 52  DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 111

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYL 598
               +V  + TY  +I+ +C+  ++   L LL KM  L  +      + ++   C    +
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
            +A  ++ +++    + D  T   L+           A  +  RM  R   P+L     V
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL-----V 226

Query: 659 SERLILEGKSEEADT 673
           +  +++ G  +  DT
Sbjct: 227 TYGVVVNGLCKRGDT 241


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 246/521 (47%), Gaps = 31/521 (5%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +LEI  ++ L   A+ V   M+ RG+     +F  +++   R GK++ A   LS M +  
Sbjct: 211 VLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRG 270

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
             P+   C   +  L     + +A+ +  +M   G  PN++ +  LI G C    IK A 
Sbjct: 271 FIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAF 330

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH----------- 315
           ++++EM   G  P+  ++  ++  LCK    ++   L  K+V  S+++            
Sbjct: 331 EMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR-SDIYKPNVHTYTSMIG 389

Query: 316 ---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
               + ++  A+ L ++M + G  P+V TYT ++NG C+ G  D+A +++  M   G +P
Sbjct: 390 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRP 449

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N  +Y A ++ LC   ++ EA E++N +       + +TY++++    ++  + +A    
Sbjct: 450 NIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFF 509

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             M K GF       N+LI + CR+ KM  +++  Q  ++ G       +TS+I G+C++
Sbjct: 510 CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKE 569

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           GD + AL    +M      PD+ TY ++I  L K   V+EA +L   M+ +GL P  VT 
Sbjct: 570 GDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTR 629

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
            T+ + YC+       + +LE +  K   RT    ++  LCS   +  A     K+L   
Sbjct: 630 VTLAYEYCKRNDSASAMIVLEPLDKKLWIRTV-RTLVRKLCSEKKVGVAALFFQKLLEKD 688

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNR-NLIPDL 652
           S AD  T              L A+  AC    + NL+ DL
Sbjct: 689 SSADRVT--------------LAAFTTACSESGKNNLVADL 715



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 144/585 (24%), Positives = 244/585 (41%), Gaps = 86/585 (14%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           + A L S++   VAL FFYWA    ++RH   +Y +  + L      Q A  V+R M R 
Sbjct: 120 VVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLIANGNLQKAHEVMRCMLRN 179

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
                          +S  G+L  A+ ++  MQ                           
Sbjct: 180 ---------------FSEIGRLNEAVGMVMDMQNQ------------------------- 199

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
                     G++P+ +T NC+++   +   I  A  + DEM ++G  PD  S+  ++  
Sbjct: 200 ----------GLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMV-- 247

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
                 I   RD               G+I+EA   ++ M Q G IPD  T T +++  C
Sbjct: 248 ------IGCFRD---------------GKIQEADRWLSGMIQRGFIPDNATCTLILSALC 286

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
             G +++A    ++M   G KPN +++T+ ++GLC  G   +A EM+       W PN  
Sbjct: 287 ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 346

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFF-PTPVEINLLIQSLCREGKMDGAKKFMQE 469
           T++ ++ GL + G   +A  +  ++V+   + P       +I   C+E K++ A+     
Sbjct: 347 THTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 406

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              +G   NV  +T+LI G C+ G+ + A  L++ M      P+  TY  +ID+L K  R
Sbjct: 407 MKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSR 466

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY---- 585
             EA EL+ K  S GL    VTY  +I   C+   ++  L    +M      +T +    
Sbjct: 467 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRM-----NKTGFEADM 521

Query: 586 ---NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
              N +I   C    ++E+ ++   V+         T   ++  Y  +G   LA K    
Sbjct: 522 RLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHN 581

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
           M     +PD      +   L  +   +EA  L    ++RG   P+
Sbjct: 582 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 626


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 166/655 (25%), Positives = 275/655 (41%), Gaps = 71/655 (10%)

Query: 85  IELRSAWSPKLEGELRNLLRSLKPRQICAVLRS-QADERVALQFFYWADRQWRYRHDPIV 143
           I L+  W  +       L+ SL P  + ++  +       AL FF W   Q  + H    
Sbjct: 48  ILLQPQW--RKNPSFNTLIPSLTPTHLSSLFNNPNLHPLTALNFFKWIHYQHGFIHTVHS 105

Query: 144 YYMMLEILSKTKLCQGAKRV-----------------LRLMARRGIECRPEAFSYLMVAY 186
           Y  +L IL +    + A+ V                 L L+          +++ L +  
Sbjct: 106 YQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTSYNRLFMVL 165

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV-VGNKLAKALRFLERMQLAGITPN 245
           SR G +     +   M    V PNL+  NT ++    +GN +     F   M+  G   +
Sbjct: 166 SRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKF-GFCCD 224

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
             TY  LI GYC +H + DA K+ + MP +GC  ++VSY  ++   C+  +I E  +L  
Sbjct: 225 SFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFF 284

Query: 306 KMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
           +M  D               F + G+  EA +   +M + G  P+V TYT +++ FC+VG
Sbjct: 285 QMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVG 344

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG------------------------- 388
           ++D+  +ML  M   G   + V + A ++G C  G                         
Sbjct: 345 KMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYN 404

Query: 389 ---------KSLE-AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
                    KS++ A  ++N   E   +PN +TY+ ++HGL +   +  A  +   M+K 
Sbjct: 405 ELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKD 464

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           GF P        I  LC+ GK++ A +  +    K    N   +T+LI G+C+     +A
Sbjct: 465 GFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDA 524

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             L   M      P+++T+  ++D L K G+VE+A  L+  M      PTV TY  +I  
Sbjct: 525 HLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEE 584

Query: 559 YCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
             +    +     L++M+S   Q     Y   I+  C  G L EA +++ K+       D
Sbjct: 585 ILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLD 644

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           +    VLV +Y   G    A+ V  RMF+    P  +    + + LI E  ++E 
Sbjct: 645 SFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEG 699



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 98/441 (22%), Positives = 176/441 (39%), Gaps = 58/441 (13%)

Query: 131 ADRQWRYRH---------DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
            D  WR  H         D   +   ++ L K    + A +V   +  +  E     ++ 
Sbjct: 451 VDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTA 510

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+  Y +A K  +A  +   M      PN +  N  +  L    K+  A+  ++ M    
Sbjct: 511 LIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFD 570

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             P V TY  LI+          A   +D+M   GC P+ V+Y   +   C+        
Sbjct: 571 AKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCR-------- 622

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                          QGR+ EA+E+V ++ + G + D   Y  +VN +  +G+LD A  +
Sbjct: 623 ---------------QGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGV 667

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM------INTSEEEWW---------- 405
           L +M+  GC+P+  +Y+  L  L     + E   +      I+      W          
Sbjct: 668 LIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITM 727

Query: 406 ----------TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
                      PN  TYS ++ GL +   LS A  +   M + G  P+    N L+ S C
Sbjct: 728 LFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCC 787

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + G  + A + +   +      ++ ++  L+ G  ++G+ E+A  +   +  C  + D V
Sbjct: 788 KLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEV 847

Query: 516 TYTTIIDALSKNGRVEEATEL 536
            +  ++D L + G V+E ++L
Sbjct: 848 VWKVLLDGLVRKGYVDECSQL 868



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/389 (22%), Positives = 167/389 (42%), Gaps = 48/389 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRNAMY 197
           +  +Y  +++   K +    A  + + M   G  C P +  F+ L+    + GK+ +AM 
Sbjct: 504 NEFLYTALIDGYCKAEKFSDAHLLFKRMLFEG--CFPNSITFNVLLDGLRKEGKVEDAMS 561

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           ++ +M K    P +      I  ++  +   +A  FL++M  +G  PNV+TY   IK YC
Sbjct: 562 LVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYC 621

Query: 258 DLHRIKDA----IKLIDEMPL-------------------------------KGCSPDKV 282
              R+ +A    +K+ +E  L                                GC P + 
Sbjct: 622 RQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQ 681

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE------LVNQMSQMGCI 336
           +Y  ++ +L  EK  KE   L    +N +N+  D   I +  +      L  +M + GC+
Sbjct: 682 TYSILLKHLIFEKYNKEGMGLD---LNSTNISVDNANIWKIADFEIITMLFEKMVEQGCV 738

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P+V TY+ ++ G C+V  L  A ++   M   G  P+   + + L+  C  G   EA  +
Sbjct: 739 PNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRL 798

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +++  E     +  +Y +++ GL  +G   +A ++ R ++  G+    V   +L+  L R
Sbjct: 799 LDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVR 858

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
           +G +D   +        GC ++    T L
Sbjct: 859 KGYVDECSQLRDIMEKTGCRLHSDTHTML 887


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 216/436 (49%), Gaps = 14/436 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS L+    +AG L  A  +           ++    T +  L    K+ +A+  +E++ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G TP + TYN L+ G C + R+++AI L+ ++   GC+PD V+Y +++  L K+KR  
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 299 EVRDLMEKMVN-----DSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           E   L ++M +     D+  +          G+I +A  +   M+  GC+PDVVT + ++
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C+ G +  A ++ + M   G  PN V Y+A ++GLC   K   A EM+   ++ + T
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 241

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ ITY++++ GL + G ++ A     EM++ G  P     N+LI   C+ G  D A   
Sbjct: 242 PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 301

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
             +  +  C+ NVV + +LI G C++  L +A      M      PD+  Y++++D L K
Sbjct: 302 FDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCK 361

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-AY 585
           +G++E    L  +M   G+  +    R + H  C+  RV++ + L   +  +      AY
Sbjct: 362 SGKLEGGCMLFDEMERSGVANSQTRTRLIFH-LCKANRVDEAVSLFNAIRKEGMPHPYAY 420

Query: 586 NQVIENLCSFGYLEEA 601
           N +I  L   G + E 
Sbjct: 421 NSIISALIKSGKVNEG 436



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 172/349 (49%), Gaps = 27/349 (7%)

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           T++ LI G      +  A  L  E    GC+ D  +Y T++ +L K K+I+E   LMEK+
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
             +                       GC P + TY A++NG C++G L++A  +L+++  
Sbjct: 61  TAN-----------------------GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 97

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +GC P+ V+YT+ ++GL    +S EA ++           + + Y+ ++ GL + GK+ +
Sbjct: 98  NGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQ 157

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  V + M  +G  P  V ++ +I  LC+ G++  A +  +    +G A N V +++LI 
Sbjct: 158 ASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 217

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C+   ++ AL +L  M      PDT+TY  +ID L K+G V  A     +ML  G  P
Sbjct: 218 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKP 277

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLC 593
            V TY  +I  +C+ G  +    + + M S  +C      Y  +I  LC
Sbjct: 278 DVYTYNILISGFCKAGNTDAACGVFDDM-SSSRCSPNVVTYGTLISGLC 325



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 195/438 (44%), Gaps = 29/438 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  +++ L+K K  Q A  ++  +   G  C P   +Y  L+    + G+L  A+ 
Sbjct: 33  DIHTYTTIVDWLAKNKKIQEAVALMEKITANG--CTPTIATYNALLNGLCKMGRLEEAID 90

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  +      P+++   + I  L    +  +A +  + M   G+  + + Y  LI+G  
Sbjct: 91  LLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLL 150

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              +I  A  +   M  +GC PD V+  T++  LCK                        
Sbjct: 151 QAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCK-----------------------A 187

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GRI  A  +   M   G  P+ V Y+A+++G C+  ++D A +ML QM    C P+T++Y
Sbjct: 188 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 247

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              ++GLC +G    AR   +   E    P+  TY++++ G  + G    AC V  +M  
Sbjct: 248 NILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSS 307

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
               P  V    LI  LC+  ++  A  + Q    +GC  +   ++SL+ G C+ G LE 
Sbjct: 308 SRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEG 367

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
              L D+M       ++ T T +I  L K  RV+EA  L   +  +G+ P    Y ++I 
Sbjct: 368 GCMLFDEMER-SGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIIS 425

Query: 558 RYCQVGRVEDLLKLLEKM 575
              + G+V +   + ++M
Sbjct: 426 ALIKSGKVNEGQAVYQEM 443



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 83/204 (40%), Gaps = 33/204 (16%)

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            F+ LI G  + G L +A SL  +        D  TYTTI+D L+KN +++EA  LM K+
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEE 600
            + G  PT+ TY                                 N ++  LC  G LEE
Sbjct: 61  TANGCTPTIATY---------------------------------NALLNGLCKMGRLEE 87

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           A  +L K++      D  T   L++    K     AYK+   M +R L  D      +  
Sbjct: 88  AIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIR 147

Query: 661 RLILEGKSEEADTLMLRFVERGHI 684
            L+  GK  +A ++      +G +
Sbjct: 148 GLLQAGKIPQASSVYKTMTSQGCV 171


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 154/644 (23%), Positives = 281/644 (43%), Gaps = 56/644 (8%)

Query: 95  LEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKT 154
           +E  L  L   L    +  V+R Q    +  +FF W  R+  +R   + + +++++L+K 
Sbjct: 51  MEDALEKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSFR-SWVTHNLVIDMLAKD 109

Query: 155 KLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
                  ++L  +    I+  P  FS L+ AY+++G    A+     M+     P++   
Sbjct: 110 DGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTY 169

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N+ +HV+V       AL    +M      PN  T+  L+ G C   +  DA+K+ DEM  
Sbjct: 170 NSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQ 229

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDS-------NLFHDQGRIEE 322
           KG  P+ + Y  ++  LC+ KR  +V  L+  M       DS       + F   G+I+E
Sbjct: 230 KGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDE 289

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A  L+    + G +  +  Y+++++G  R    D+ ++  ++M+  G +P+ V YT  + 
Sbjct: 290 AFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIR 349

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           G C  G    A  M+N   +   +P+   Y+ ++ G    G L +A  +  E+ K   FP
Sbjct: 350 GFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFP 409

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
           T     +LI  +CR G +D A++   +  N GC+ +++ F +LI G C+ G+LEEA  L 
Sbjct: 410 TSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLF 469

Query: 503 DDMYLCKKDPDTVTYTTIIDAL--SKNG-----RVEEATELMMKMLSKGLVPTVVTYRTV 555
             M + K     +  +   D +  + NG     R E+A  ++ +M+  G  P+   Y+ +
Sbjct: 470 YKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCL 529

Query: 556 IHRYCQVGRV------------------EDLLKLLEKMLSKQKCRTAYNQVIE------- 590
           +   C+ G++                  ++ LKL E+   K +   A   ++E       
Sbjct: 530 MTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNN 589

Query: 591 -----------NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                       LC     EEA KI   +       +  +C +L+      G   +A  +
Sbjct: 590 FEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDI 649

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
                 +  +   ++C ++   LIL+ K + A  L+ R    G+
Sbjct: 650 FLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGY 693


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 193/402 (48%), Gaps = 39/402 (9%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GK   A  ++  M +    P+    +  I  L    K+ KA    + M++ G+TP+V TY
Sbjct: 202 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 261

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             LI  +C    I+ A  L +EM   GCSP  V+Y  ++    K K++ +  D+  +MV+
Sbjct: 262 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 321

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY--- 366
                                   GC P+ VTY A+V+G C+ G + +A ++  ++    
Sbjct: 322 -----------------------AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 358

Query: 367 -------------HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
                         H   PN V+Y A ++GLC   K   A E+++        PN I Y 
Sbjct: 359 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 418

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++ G  + GK+  A +V  +M K G+ P+      LI  + ++G++D A K + + L  
Sbjct: 419 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 478

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
            C  NVV +T++I G C+ G+ E+AL LL  M      P+ VTYT +ID L K G+++ +
Sbjct: 479 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 538

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            +L  +M  KG  P  VTYR +I+  C  G ++    LL +M
Sbjct: 539 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 580



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 239/533 (44%), Gaps = 38/533 (7%)

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
           ++++     A     AM  L  M+  +  PN++   T +   +   +L    R +  M  
Sbjct: 46  THMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMT 105

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI-- 297
            G  PN   +N L+  YC+      A KL++ M   GC P  V Y   +G +C ++++  
Sbjct: 106 EGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPS 165

Query: 298 KEVRDLMEKM-------------VNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVT 341
            ++ DL EK+             VN +N        G+ ++A +L+ +M + G +PD  T
Sbjct: 166 PDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTST 225

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y+ V+   C   ++++A  + Q+M   G  P+  +YT  ++  C  G   +A+ +     
Sbjct: 226 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 285

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
               +P  +TY+ ++H   +  ++ +A D+   MV  G  P  V    L+  LC+ G + 
Sbjct: 286 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 345

Query: 462 GA---------------KKFMQECLNKGC-AVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
            A                 F   C ++   A NVV + +L+ G C+   ++ A  LLD M
Sbjct: 346 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 405

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                +P+ + Y  +ID   K G+++ A E+ ++M   G +P+V TY ++I R  + GR+
Sbjct: 406 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 465

Query: 566 EDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           +  +K+L +ML K  C      Y  +I+ LC  G  E+A K+L  +       +  T   
Sbjct: 466 DLAMKVLSQML-KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 524

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           L++     G   L+  +  +M  +   P+    + +   L   G  ++A  L+
Sbjct: 525 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLL 577



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 222/460 (48%), Gaps = 43/460 (9%)

Query: 154 TKLCQGAK---RVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVA 208
           T LC   K     L     + +   P+ ++Y  L+ ++ +AG +  A ++   M+    +
Sbjct: 231 TFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS 290

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           P ++     IH  +   ++ +A     RM  AG  PN +TY  L+ G C    I  A ++
Sbjct: 291 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 350

Query: 269 IDEM-------------PLK---GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS- 311
             ++             P +     +P+ V+Y  ++  LCK  ++    +L++ M++   
Sbjct: 351 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 410

Query: 312 -----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                      + F   G+I+ A+E+  QM++ G +P V TYT++++   + G LD A K
Sbjct: 411 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 470

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L QM    C PN V+YTA ++GLC  G+S +A ++++  EE+  +PN +TY+ ++ GL 
Sbjct: 471 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 530

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           + GK+  + D+  +M +KG  P  V   +LI  LC  G +D A+  + E         + 
Sbjct: 531 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 590

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            +   I+GF +      +L +L++M      P    Y  +ID  SK GR+E A EL  +M
Sbjct: 591 GYRCAIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 648

Query: 541 LSKGLVPTVV-----TYRTVIHRYCQVGRVEDLLKLLEKM 575
           +    VP+ V      Y ++I   C   +VE+  +L  +M
Sbjct: 649 ME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEM 685



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 223/493 (45%), Gaps = 54/493 (10%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A ++++ M R+G       +S ++     A K+  A  +   M+   V P++      I 
Sbjct: 207 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 266

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A    E M+  G +P V+TY  LI  Y    ++  A  +   M   GC P
Sbjct: 267 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 326

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFHDQGRIEEAKELVNQMSQMG 334
           + V+Y  ++  LCK   I +  ++  K++      DS+ +      E+   L        
Sbjct: 327 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP---CEDRHTLA------- 376

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P+VVTY A+V+G C+  ++D A ++L  M   GC+PN + Y A ++G C  GK   A+
Sbjct: 377 --PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 434

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E+     +  + P+  TY+ ++  + ++G+L  A  V+ +M+K    P  V    +I  L
Sbjct: 435 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 494

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CR G+ + A K +     KGC+ NVV +T+LI G  + G ++ +L L   M      P+ 
Sbjct: 495 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 554

Query: 515 VTYTTIIDALSKNGRVEEATELM--MK-------------------------------ML 541
           VTY  +I+ L   G +++A  L+  MK                               M 
Sbjct: 555 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 614

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML----SKQKCRTAYNQVIENLCSFGY 597
           S G VP    Y  +I  + + GR+E  ++L ++M+    S +     Y  +I+ LC    
Sbjct: 615 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQ 674

Query: 598 LEEAGKILGKVLR 610
           +EEA ++  ++ R
Sbjct: 675 VEEAFRLYSEMTR 687



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 205/472 (43%), Gaps = 69/472 (14%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y ++++   K  L + A+ +   M  R + C P   +Y  L+ AY +A ++  A  
Sbjct: 257 DVYTYTILIDSFCKAGLIEQAQWLFEEM--RSVGCSPTVVTYTALIHAYLKAKQVPQAND 314

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG---------------- 241
           +   M  A   PN +     +  L     ++KA     ++                    
Sbjct: 315 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 374

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + PNV+TY  L+ G C  H++  A +L+D M   GC P+ + Y  ++   CK  +I   +
Sbjct: 375 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 434

Query: 302 DLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
           ++  +M     L             F D GR++ A ++++QM +  C P+VVTYTA+++G
Sbjct: 435 EVFLQMTKCGYLPSVHTYTSLIDRMFKD-GRLDLAMKVLSQMLKDSCTPNVVTYTAMIDG 493

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
            CR+GE ++A K+L  M   GC PN V+YTA ++GL   GK   + ++      +  +PN
Sbjct: 494 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPN 553

Query: 409 AITYSVVMHGLRREGKLSEA---------------------------------CDVVREM 435
            +TY V+++ L   G L +A                                   ++ EM
Sbjct: 554 YVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEM 613

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN--FTSLIRGFCQKG 493
              G  P      +LI    + G+++ A +  +E +    +V   N  + SLI+  C   
Sbjct: 614 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 673

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
            +EEA  L  +M      P+   +  +I  L +  + +EA +L   +  +G+
Sbjct: 674 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 170/381 (44%), Gaps = 35/381 (9%)

Query: 127 FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY 186
           F++  + +     + + Y  +++ L K      A  +L  M   G E     +  L+  +
Sbjct: 365 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 424

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
            +AGK+ +A  V   M K    P++    + I  +    +L  A++ L +M     TPNV
Sbjct: 425 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNV 484

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           +TY  +I G C +   + A+KL+  M  KGCSP+ V+Y  ++  L K             
Sbjct: 485 VTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGK------------- 531

Query: 307 MVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                      G+I+ + +L  QMS+ GC P+ VTY  ++N  C  G LD+A+ +L +M 
Sbjct: 532 ----------AGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 581

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT-PNAITYSVVMHGLRREGKL 425
                     Y   + G     KS  A   I    E + T P A  Y +++    + G+L
Sbjct: 582 QTYWPKYLQGYRCAIQGF---SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRL 638

Query: 426 SEACDVVREMVKKGFFPTPVEIN-----LLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
             A ++ +EM++    P+ V+ +      LIQ+LC   +++ A +   E   +G    + 
Sbjct: 639 EIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELS 695

Query: 481 NFTSLIRGFCQKGDLEEALSL 501
            F  LI+G  +    +EAL L
Sbjct: 696 VFVCLIKGLVEVKKWDEALQL 716


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 253/528 (47%), Gaps = 36/528 (6%)

Query: 167 MARRGIE-CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           MAR G +   P   +Y  L+      G L  A   L  + K  +  N +     +  L  
Sbjct: 1   MARAGSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCA 60

Query: 224 GNKLAKALRFLERMQLA-GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG--CSPD 280
             + + A+  + R     G TP+V +Y  L+KG CD  + ++A+ LI  M   G  C P+
Sbjct: 61  EKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPN 120

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVN--------DSNLFHDQ----GRIEEAKELVN 328
            VSY TV+    KE  + +   L  +M++          N   D       +++A+E++ 
Sbjct: 121 VVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLR 180

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           QM     +PD  TY ++V+G+   G+L +A ++L+QM  HG  PN V+Y+  ++ LC  G
Sbjct: 181 QMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFG 240

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              EARE++N+  +    PN  TY  ++HG   +G L E  +++  MV+ G  P     N
Sbjct: 241 GHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFN 300

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           + I +  + G++D A     +   +G   +++++ ++I G C+ G L+ A+S    M   
Sbjct: 301 IQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDD 360

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD V +T +I   S  G+ E+A EL  +M+ +G+ PTVV + T+I +  + G+V + 
Sbjct: 361 GLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEA 420

Query: 569 LKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
             L + M   S +    +YN +I      G L+E  K+L  +L    K +A T + L++ 
Sbjct: 421 KTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDD 480

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            L+ G                L PD+  C  + +    +G+ E+  TL
Sbjct: 481 MLSMG----------------LKPDVATCNTLIDSCCEDGRIEDVLTL 512



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 223/498 (44%), Gaps = 39/498 (7%)

Query: 89  SAWSPKLEGELRNLLRSLKP--RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYM 146
           +A    ++  LR    S  P  R +CA  R+     + ++   W  +      D   Y +
Sbjct: 34  AALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNIVIR---WTPK-LGCTPDVFSYTV 89

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQK 204
           +L+ L   K C+ A  ++ +MA  G  C P   SY  V   + +  ++  A  +   M  
Sbjct: 90  LLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLD 149

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
             + P+++ CN+ I  L     + KA   L +M    I P+  TYN L+ GY    ++K+
Sbjct: 150 RGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKE 209

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFH 315
           A++++ +M   G  P+ V+Y  ++  LCK     E R+++  M+             L H
Sbjct: 210 AVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLH 269

Query: 316 D---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
               +G + E   L++ M Q G  PD   +   +  + + G LD+A     +M   G  P
Sbjct: 270 GYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMP 329

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           + +SY   ++GLC  G+   A        ++  +P+ + ++ ++HG    GK  +A ++ 
Sbjct: 330 DIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELF 389

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            EM+ +G  PT V    +I  L +EGK+  AK             NVV++ ++I G+   
Sbjct: 390 YEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLA 449

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTY-------------------TTIIDALSKNGRVEEA 533
           G L+E L LLDDM      P+ VT+                    T+ID+  ++GR+E+ 
Sbjct: 450 GKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDV 509

Query: 534 TELMMKMLSKGLVPTVVT 551
             L  +MLSK      VT
Sbjct: 510 LTLFREMLSKAAKTDTVT 527



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 177/374 (47%), Gaps = 6/374 (1%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM-LQQMYHHGCKPNTVS 376
           G +  A   + Q+ + G   + +++T ++   C       A  + ++     GC P+  S
Sbjct: 27  GCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNIVIRWTPKLGCTPDVFS 86

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEW--WTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           YT  L GLC   K  EA ++I+   E+     PN ++Y+ V+HG  +E ++ +A  +  E
Sbjct: 87  YTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCE 146

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M+ +G  P  V  N +I  LC+   MD A++ +++  +K    +   + SL+ G+   G 
Sbjct: 147 MLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQ 206

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           L+EA+ +L  M    + P+ VTY+ +ID L K G   EA E++  M+     P V TY  
Sbjct: 207 LKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGG 266

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           ++H Y   G + ++  L++ M+    +     +N  I      G L+EA     K+ +  
Sbjct: 267 LLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQG 326

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
              D  +   +++     G    A    C+M +  L PD+ +   +     + GK E+A+
Sbjct: 327 LMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAE 386

Query: 673 TLMLRFVERGHIQP 686
            L    ++RG I+P
Sbjct: 387 ELFYEMMDRG-IRP 399


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 243/514 (47%), Gaps = 62/514 (12%)

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
           +A  +LS M ++   PN L     IH L       +A+  L++M     T  V+ YN +I
Sbjct: 221 DAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEII 280

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
               +L R+++A+ L D+MP   C PD  SY TVM  LC++                   
Sbjct: 281 SCLAELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRD------------------- 318

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
               GR E+A  L+  M +  C PD VT+  V++  C  G +D A ++++QM  +GCKP+
Sbjct: 319 ----GRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPD 374

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             +Y+A +N L   G   +A E++ T     W PN + Y  V+ GL R  +  +   +V 
Sbjct: 375 NFTYSALVNALSERGCVDDALELLRTIP---WKPNTVCYRSVLKGLCRADRWDDVGKLVA 431

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM++       V   L+I  LC++G +D   + ++E    GC+ +++ + SLI GF + G
Sbjct: 432 EMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENG 491

Query: 494 DLEEALSLLDDMY--------------LCKKD------------------PDTVTYTTII 521
            +++AL L  +M               LC+ +                  P+ VT++T+I
Sbjct: 492 SVDDALELFKNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLI 551

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
             L + G VE A E+  KM     +P V+ Y T+I+       V+D LKLL  M  K   
Sbjct: 552 SYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMPCKPD- 610

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              Y+  ++ LC     E+AG+++ +++R     D  T  +L+ +  +KG    A +V+ 
Sbjct: 611 TICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSE 670

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
            M     +P++ +   +      + ++E+A  L+
Sbjct: 671 LMLKYECMPNVFIYSSLINGFAEQYRAEDALQLL 704



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 246/497 (49%), Gaps = 24/497 (4%)

Query: 172 IECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           + C+P+ FSY  +M    R G+  +A  +++ M +    P+ +  NT I  L     +  
Sbjct: 299 MPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDC 358

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A+  +E+M   G  P+  TY+ L+    +   + DA++L+  +P K   P+ V Y +V+ 
Sbjct: 359 AMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPWK---PNTVCYRSVLK 415

Query: 290 YLCKEKRIKEVRDLMEKMV-NDSNL-----------FHDQGRIEEAKELVNQMSQMGCIP 337
            LC+  R  +V  L+ +M+ N  NL              +G ++   E++ +M++ GC P
Sbjct: 416 GLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSP 475

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D++ Y +++NGF   G +D A ++ + M    CK N V+Y   L GLC   +  +A +++
Sbjct: 476 DIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNYMLKGLCRAEQWEDAGKLV 532

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
               ++   PN +T+S ++  L ++G +  A +V  +M K    P  +  + LI  L  +
Sbjct: 533 AEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQ 592

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
             +D A K + +     C  + + +++ ++G C+    E+A  L+ +M      PD VT+
Sbjct: 593 ECVDDALKLLND---MPCKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTF 649

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           + +I+ L   G +E ATE+   ML    +P V  Y ++I+ + +  R ED L+LL  M  
Sbjct: 650 SILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMPC 709

Query: 578 KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
           +      Y+  ++ LC     E+A +++ ++ R     D +T  +L+ S    G+  +A 
Sbjct: 710 EPD-TICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMAT 768

Query: 638 KVACRMFNRNLIPDLKL 654
           +V  +M      P+ K+
Sbjct: 769 EVFEQMSVYGCSPNRKI 785



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 224/509 (44%), Gaps = 94/509 (18%)

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH-RIKDAIK 267
           P  + C   I  L    +L  A R L   + AG T + +T N L+ GYC    R+ DA +
Sbjct: 100 PAAVPCTLLIKKLCAAGRLDDAERVLGASERAG-TADAVTRNTLVAGYCRAGGRLADAER 158

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELV 327
           ++  + L G S D V+Y T++   C+E                       GR+ +A+ LV
Sbjct: 159 MLASLALSG-SADVVTYNTLVAGYCRE-----------------------GRLNDARRLV 194

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
              + M   P+  T + ++ G C   E D A+++L +M   GC PN +++   ++ LC N
Sbjct: 195 ---ADMPFAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQN 251

Query: 388 GKSLEA--------------------------------REMINTSEEEWWTPNAITYSVV 415
           G +  A                                 E ++  ++    P+  +Y+ V
Sbjct: 252 GLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMPCKPDIFSYNTV 311

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           M GL R+G+  +A  ++  MV+K   P  V  N +I  LC  G +D A + +++    GC
Sbjct: 312 MKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGC 371

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMY--------------LCKKDP--------- 512
             +   +++L+    ++G +++AL LL  +               LC+ D          
Sbjct: 372 KPDNFTYSALVNALSERGCVDDALELLRTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVA 431

Query: 513 ---------DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
                    D VT+  IID L + G V+   E++ +M   G  P ++ Y ++I+ + + G
Sbjct: 432 EMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENG 491

Query: 564 RVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
            V+D L+L + M  K+   T YN +++ LC     E+AGK++ ++++     +  T   L
Sbjct: 492 SVDDALELFKNMSCKRNVVT-YNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTL 550

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           +     KG    A +V  +M   N +P++
Sbjct: 551 ISYLCQKGFVECAIEVFEKMPKYNCMPNV 579



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 214/443 (48%), Gaps = 32/443 (7%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R   ++ + + Y  +L+ L +        +++  M R  +      F  ++    + G +
Sbjct: 399 RTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLV 458

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
                VL  M K   +P+++I N+ I+       +  AL   + M       NV+TYN +
Sbjct: 459 DYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKR---NVVTYNYM 515

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           +KG C   + +DA KL+ EM    C P++V++ T++ YLC+                   
Sbjct: 516 LKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQ------------------- 556

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
               +G +E A E+  +M +  C+P+V+ Y+ ++NG      +D A K+L  M    CKP
Sbjct: 557 ----KGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDM---PCKP 609

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           +T+ Y+A L GLC   +  +A E+I     +   P+ +T+S++++ L  +G L  A +V 
Sbjct: 610 DTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVS 669

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             M+K    P     + LI     + + + A + ++   N  C  + + +++ ++G C+ 
Sbjct: 670 ELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLR---NMPCEPDTICYSAALKGLCRA 726

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
              E+A  L+ +M+  +   D  T++ +I +L +NG V+ ATE+  +M   G  P    +
Sbjct: 727 KRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIH 786

Query: 553 RTVIHRYCQVGRVEDLLKLLEKM 575
            ++++ Y +  RV++ LKLL  M
Sbjct: 787 SSLVNGYSEQRRVDEGLKLLSSM 809



 Score = 39.3 bits (90), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 4/116 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A+  L+L+  R + C P+   Y   +    RA +  +A  +++ M +     +    +  
Sbjct: 697 AEDALQLL--RNMPCEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSML 754

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           I  L     +  A    E+M + G +PN   ++ L+ GY +  R+ + +KL+  MP
Sbjct: 755 IGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSMP 810


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 221/456 (48%), Gaps = 67/456 (14%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAG----ITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           N+ ++V++      + L F + +  +     I+PN L++N +IK  C L  +  AI++  
Sbjct: 152 NSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFR 211

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQM 330
            MP K C PD  +Y T+M  LCKE+RI                       +EA  L+++M
Sbjct: 212 GMPEKKCLPDGYTYCTLMDGLCKEERI-----------------------DEAVLLLDEM 248

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK- 389
              GC P  V Y  +++G C+ G+L +  K++  M+  GC PN V+Y   ++GLC  GK 
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKL 308

Query: 390 ----------------------------------SLEAREMINTSEEEWWTPNAITYSVV 415
                                             +++   ++ + EE  +  N   YSV+
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVL 368

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + GL +EGK  EA  + ++M +KG  P  V  + +I  LCREGK + AK+ +   ++ GC
Sbjct: 369 ISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGC 428

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             NV  ++SL++GF + G  EEA+ +  +M       +   Y+ +ID L   GRV+EA  
Sbjct: 429 LPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMM 488

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-----AYNQVIE 590
           +  KML+ G+ P  V Y ++I   C +G ++  LKL  +ML +++ ++      YN +++
Sbjct: 489 VWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLD 548

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            LC    +  A  +L  +L      D  TC+  + +
Sbjct: 549 GLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNT 584



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 230/484 (47%), Gaps = 45/484 (9%)

Query: 124 ALQFF-YWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
            L+F+ Y  +        P  + + ++++ L K      A  V R M  +  +C P+ ++
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEK--KCLPDGYT 224

Query: 181 Y--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           Y  LM    +  ++  A+ +L  MQ    +P+ +I N  I  L     L++  + ++ M 
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMF 284

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
           L G  PN +TYN LI G C   ++  A+ L++ M    C P+ V+Y T++  L K++R  
Sbjct: 285 LKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAM 344

Query: 299 EVRDLMEKM-------------VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
           +   L+  M             V  S LF  +G+ EEA  L  +M++ GC P++V Y+AV
Sbjct: 345 DGARLLISMEERGYRLNQHIYSVLISGLFK-EGKAEEAMTLWKKMAEKGCRPNIVVYSAV 403

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G CR G+ ++AK++L  M   GC PN  +Y++ + G    G S EA ++    +E   
Sbjct: 404 IDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGC 463

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           + N   YSV++ GL   G++ EA  V  +M+  G  P  V  + +I+ LC  G MD A K
Sbjct: 464 SRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALK 523

Query: 466 FMQECL---NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
              E L         +VV +  L+ G C + D+  A+ LL+ M     DPD +T  T ++
Sbjct: 524 LYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLN 583

Query: 523 ALS---------------------KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            LS                     K  RV  A +++  ML K L P   T+  ++   C+
Sbjct: 584 TLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICK 643

Query: 562 VGRV 565
             ++
Sbjct: 644 PKKI 647



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 147/346 (42%), Gaps = 47/346 (13%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K +      R+L  M  RG       +S L+    + GK   AM +   
Sbjct: 328 VTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKK 387

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +    PN+++ +  I  L    K  +A   L  M  +G  PNV TY+ L+KG+     
Sbjct: 388 MAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGL 447

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            ++AI++  EM   GCS ++  Y  ++  LC                         GR++
Sbjct: 448 SEEAIQVWREMDETGCSRNEFCYSVLIDGLC-----------------------GVGRVK 484

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY---HHGCKPNTVSYT 378
           EA  + ++M  +G  PD V Y++++ G C +G +D A K+  +M        +P+ V+Y 
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG--------------- 423
             L+GLC       A +++N   +    P+ IT +  ++ L  +                
Sbjct: 545 ILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVA 604

Query: 424 ------KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
                 ++S AC +V  M+ K   P      +++  +C+  K++ A
Sbjct: 605 RLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKINAA 650


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/534 (23%), Positives = 252/534 (47%), Gaps = 45/534 (8%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           AK    +M + G+   P+ +SY  L+     AG +  A+   + M+   V P+++  N  
Sbjct: 289 AKSFFCMMIKYGL--LPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNIL 346

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
            +   +   ++ A + ++RM L G+ P+++TY  LI G+C +  I+++ KL ++M  +G 
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFHDQGRIEEAKELVNQMSQM 333
               V+Y  ++  LCK  RI E   L+ +M    +    L + +G +EEA EL  +M   
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSK 466

Query: 334 GCIPD-----------------------------------VVTYTAVVNGFCRVGELDQA 358
              P+                                   ++ Y  +++G+ ++G + +A
Sbjct: 467 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEA 526

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            +  +Q+   G  P  V++ + + G C  GK  EA ++++T +     P ++TY+ +M+G
Sbjct: 527 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNG 586

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
              EG +    D++ EM  K   PT +   ++++ LC+EG++  + + ++    +G   +
Sbjct: 587 YCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPD 646

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            + + ++I+ FC+  DL++A  L + M      P  VTY  +I+ L   G +++A  L++
Sbjct: 647 QITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLV 706

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
            +  + +  T V Y T+I  +C  G V++ L    +M+ +  +     Y+ VI  LC   
Sbjct: 707 TLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRN 766

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            + +A      +L      D   C V++ ++   G P   +++   M    L+P
Sbjct: 767 LITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 147/620 (23%), Positives = 268/620 (43%), Gaps = 70/620 (11%)

Query: 78  VREVCRLIELRSAWSPK-LEGE----LRNLLRSLKPRQICAVLRSQADERVALQFFYWAD 132
           VR++  LI LRS  + K L G     L ++L + +  QI   LR    +  AL  F    
Sbjct: 50  VRQI--LIGLRSFGASKFLWGHHFQTLASVLNTHQVDQILLSLRVDNSDS-ALFLFDLLR 106

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
            ++ +RH  + ++++  ++++    +  +RVL  M          +   L+    R   L
Sbjct: 107 NEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDL 166

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            N ++            ++L C  +   +V       AL  L +M++  +  ++ TYN L
Sbjct: 167 NNVVW------------DMLACAYSRAEMV-----HDALFVLAKMKVLNLQVSIATYNSL 209

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           +    +L        + +E+   G   ++ +   ++  LC++ R+++    +        
Sbjct: 210 LY---NLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLR------- 259

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                   E   E      + G  P VV++ A+++GFC++G +D AK     M  +G  P
Sbjct: 260 --------ETGGE------EFG--PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLP 303

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           +  SY   L+GLC  G   EA E  N  E     P+ +TY+++ +G R  G +S A  VV
Sbjct: 304 DVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVV 363

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           + M+  G  P  V   +LI   C+ G ++ + K  ++ L++G  +++V +T L+   C+ 
Sbjct: 364 QRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKS 423

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G ++EA+ LL +M +    PD +TY+         G VEEA EL  +M SK + P     
Sbjct: 424 GRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSKRIYPNSFVC 475

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLR 610
             +I    + G + +     + +           YN +I+     G + EA +   +++ 
Sbjct: 476 SAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIE 535

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                   T + L+  +  KG    A K+   +    L+P       V+   ++ G  EE
Sbjct: 536 KGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVP-----TSVTYTTLMNGYCEE 590

Query: 671 ADTL----MLRFVERGHIQP 686
            D      ML  +E   I+P
Sbjct: 591 GDMHSMFDMLHEMEAKAIKP 610


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 238/473 (50%), Gaps = 14/473 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI       + ++  + R  K   A  VL  + K    P+    NT I+ L + +K
Sbjct: 91  MELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESK 150

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++A+  + RM   G  PNV+TYN ++ G C       A+ L+ +M  +    D  +Y T
Sbjct: 151 VSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYST 210

Query: 287 VMGYLCKEKRIKEVRDLMEKM----VNDSNLFHDQ--------GRIEEAKELVNQMSQMG 334
           ++  LC++  I     L ++M    +  S + ++         G+  +  +L+  M+   
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            IP+V+T+  +++ F + G+L +A ++ ++M   G  PNT++Y + ++G C   +  EA 
Sbjct: 271 IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEAN 330

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            M++       +P+ +T++ ++ G  +  ++ E   + R++ K+G     V  ++L+Q  
Sbjct: 331 NMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGF 390

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ GK++ A++  QE ++ G   +V+ +  L+ G C  G LE+AL + +D+   K + D 
Sbjct: 391 CQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDI 450

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           V YT II+ + K G+VE+A  L   +  KG+ P V+TY  +I   C+ G + +   LL K
Sbjct: 451 VMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 510

Query: 575 ML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           M     +     YN +I      G L  + K++ ++      ADAS+  ++++
Sbjct: 511 MEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 563



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 224/456 (49%), Gaps = 25/456 (5%)

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
            L F ++M+L GI  N+ T N +I  +C   +   A  ++ ++   G  PD  ++ T++ 
Sbjct: 84  VLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 143

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            LC E ++                        EA  LV +M + GC P+VVTY ++VNG 
Sbjct: 144 GLCLESKV-----------------------SEAVVLVARMVENGCQPNVVTYNSIVNGI 180

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G+   A  +L++M     K +  +Y+  ++ LC +G    A  +    E +    + 
Sbjct: 181 CKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSL 240

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           +TY+ ++ GL + GK ++   ++++M  +   P  +  N+LI    +EGK+  A +  +E
Sbjct: 241 VTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKE 300

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            + KG + N + + SL+ G+C +  L EA ++LD M      PD VT+T++I    K  R
Sbjct: 301 MITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKR 360

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQ 587
           V+E  +L  K+  +GLV   VTY  ++  +CQ G++E   +L ++M+S         Y  
Sbjct: 361 VDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGI 420

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +++ LC  G LE+A +I   + ++    D     +++E     G    A+ + C +  + 
Sbjct: 421 LLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKG 480

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           + P++     +   L  +G   EA+ L+ +  E G+
Sbjct: 481 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 516



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 210/430 (48%), Gaps = 12/430 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  + + G E     F+ L+       K+  A+ +++ M +    PN++  N+ ++
Sbjct: 119 AYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVN 178

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            +      + AL  L +M    +  +V TY+ +I   C    I  AI L  EM  KG   
Sbjct: 179 GICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 238

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
             V+Y +++G LCK  +  +   L++ M +              ++F  +G+++EA EL 
Sbjct: 239 SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELY 298

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M   G  P+ +TY ++++G+C    L +A  ML  M  + C P+ V++T+ + G C  
Sbjct: 299 KEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKV 358

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            +  E  ++     +     N +TYS+++ G  + GKL  A ++ +EMV  G  P  +  
Sbjct: 359 KRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTY 418

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            +L+  LC  GK++ A +  ++       +++V +T +I G C+ G +E+A +L   +  
Sbjct: 419 GILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPC 478

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ +TYT +I  L K G + EA  L+ KM   G  P   TY T+I  + + G +  
Sbjct: 479 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTA 538

Query: 568 LLKLLEKMLS 577
             KL+E+M S
Sbjct: 539 SAKLIEEMKS 548



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 200/408 (49%), Gaps = 24/408 (5%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
             D  +AL      D +   + D   Y  +++ L +      A  + + M  +GI+    
Sbjct: 183 SGDTSLALDLLRKMDER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLV 241

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            ++ L+    +AGK  + + +L  M    + PN++  N  I V V   KL +A    + M
Sbjct: 242 TYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEM 301

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              GI+PN +TYN L+ GYC  +R+ +A  ++D M    CSPD V++ +++   CK KR+
Sbjct: 302 ITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRV 361

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                                  +E  +L  ++S+ G + + VTY+ +V GFC+ G+L+ 
Sbjct: 362 -----------------------DEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEI 398

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A+++ Q+M   G  P+ ++Y   L+GLC NGK  +A E+    ++     + + Y++++ 
Sbjct: 399 AEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIE 458

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G+ + GK+ +A ++   +  KG  P  +   ++I  LC++G +  A   +++    G   
Sbjct: 459 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEP 518

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
           N   + +LIR   + GDL  +  L+++M  C    D  +   +ID LS
Sbjct: 519 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLS 566



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/369 (21%), Positives = 172/369 (46%), Gaps = 12/369 (3%)

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           ++A +L  +M +   +P +V ++   +G     + +      ++M  +G   N  +    
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           +N  C   K+  A  ++    +  + P+  T++ +++GL  E K+SEA  +V  MV+ G 
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  V  N ++  +C+ G    A   +++   +    +V  ++++I   C+ G ++ A+S
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L  +M         VTY +++  L K G+  +  +L+  M S+ ++P V+T+  +I  + 
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286

Query: 561 QVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           + G++++  +L ++M++K        YN +++  C    L EA  +L  ++R     D  
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIV 346

Query: 619 TCHVLVESY-----LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
           T   L++ Y     +++G+ L       ++  R L+ +      + +     GK E A+ 
Sbjct: 347 TFTSLIKGYCKVKRVDEGMKLFR-----KISKRGLVANTVTYSILVQGFCQSGKLEIAEE 401

Query: 674 LMLRFVERG 682
           L    V  G
Sbjct: 402 LFQEMVSLG 410



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 136/295 (46%), Gaps = 18/295 (6%)

Query: 406 TPNAITYSVVMHGLR-REG----KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           T + I+   V +G R R G    K  +A D+ +EM++    P+ V+ +     +    + 
Sbjct: 22  TISGISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQF 81

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           +    F ++    G A N+     +I  FC+      A S+L  +     +PDT T+ T+
Sbjct: 82  NLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL 141

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-- 578
           I+ L    +V EA  L+ +M+  G  P VVTY ++++  C+ G     L LL KM  +  
Sbjct: 142 INGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNV 201

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY-----LNKGIP 633
           +     Y+ +I++LC  G ++ A  +  ++     K+   T + LV         N G+ 
Sbjct: 202 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQ 261

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           LL       M +R +IP++     + +  + EGK +EA+ L    + +G I P +
Sbjct: 262 LLK-----DMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKG-ISPNT 310


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 172/632 (27%), Positives = 277/632 (43%), Gaps = 109/632 (17%)

Query: 161 KRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
           KRVL +M   G    P+ F+ L+ AY  +G    A  +L  M K    P  ++ N  I  
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416

Query: 221 LVVGNK-------LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
            + G+K       L  A +    M  AG+  N +  +   +  C   + + A  +I EM 
Sbjct: 417 -ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDS-------NLFHDQGRIE 321
            +G  PD  +Y  V+ YLC   +++    L E+M     V D        + F   G IE
Sbjct: 476 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC----------- 370
           +A++  N+M ++GC P+VVTYTA+++ + +  ++  A ++ + M   GC           
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595

Query: 371 ----------------------------------------KPNTVSYTAFLNGLCHNGKS 390
                                                   +PN V+Y A L+G C + + 
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 655

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EAR++++    E   PN I Y  ++ GL + GKL EA +V  EM + GF  T    + L
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSL 715

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I    +  + D A K + + L   CA NVV +T +I G C+ G  +EA  L+  M     
Sbjct: 716 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC 775

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P+ VTYT +ID     G++E   EL+ +M SKG+ P  VTYR +I   C+ G ++    
Sbjct: 776 QPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHN 835

Query: 571 LLEKM-LSKQKCRTA-YNQVIENLC-----SFGYLEEAGK------------ILGKVLR- 610
           LLE+M  +     TA Y +VIE        S G L+E G+            ++  +++ 
Sbjct: 836 LLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895

Query: 611 ----------------TASKAD-ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
                           +A+  D +ST + L+ES         A+++   M  + +IP+++
Sbjct: 896 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 955

Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERGHIQ 685
               + + L    K  EA  L+L F+    IQ
Sbjct: 956 SFCSLIKGLFRNSKISEA-LLLLDFISHMEIQ 986



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 157/660 (23%), Positives = 277/660 (41%), Gaps = 77/660 (11%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           LR     L    +  VLR  A     + FF WA RQ  Y+H   VY  +++++ +    +
Sbjct: 123 LRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEK 182

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
             +  L+ +     E   E  + L+  + R G    A+  L  ++     P+    N  I
Sbjct: 183 VPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLI 242

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
              +  ++L  A      M LA +  +  T  C     C + + ++A+ L++    +   
Sbjct: 243 QAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFV 299

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH------------DQGRIEEAKEL 326
           PD V Y  ++  LC+    +E  D + +M   S L +            ++ ++   K +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           +N M   GC P    + ++V+ +C  G+   A K+L++M   G  P  V Y   +  +C 
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419

Query: 387 NGKSLEAREMINTSEEEWW-------TPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
           +  SL   ++++ +E+ +          N I  S     L   GK  +A  V+REM+ +G
Sbjct: 420 DKDSLNC-DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           F P     + ++  LC   KM+ A    +E    G   +V  +T ++  FC+ G +E+A 
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
              ++M      P+ VTYT +I A  K  +V  A EL   MLS+G +P +VTY  +I  +
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598

Query: 560 CQVGRVEDLLKLLEKM-------------------------------------------- 575
           C+ G+VE   ++ E+M                                            
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658

Query: 576 ------LSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
                 +S + C   +  Y+ +I+ LC  G L+EA ++  ++      A   T   L++ 
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           Y       LA KV  +M   +  P++ +  ++ + L   GK++EA  LM    E+G  QP
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG-CQP 777



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 221/489 (45%), Gaps = 82/489 (16%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y +M++   K  L + A++    M  R + C P   +Y  L+ AY +A K+  A  
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTALIHAYLKAKKVSYANE 574

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM----QLAGIT---------- 243
           +   M      PN++  +  I       ++ KA +  ERM     +  +           
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634

Query: 244 --PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             PNV+TY  L+ G+C  HR+++A KL+D M ++GC P+++ Y  ++  LCK        
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK-------- 686

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                           G+++EA+E+  +MS+ G    + TY+++++ + +V   D A K+
Sbjct: 687 ---------------VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L +M  + C PN V YT  ++GLC  GK+ EA +++   EE+   PN +TY+ ++ G   
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            GK+    +++  M  KG  P  V   +LI   C+ G +D A   ++E        +   
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDP----------------------------- 512
           +  +I GF    +  E+L LLD++      P                             
Sbjct: 852 YRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909

Query: 513 --------DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
                    + TY ++I++L    +VE A +L  +M  KG++P + ++ ++I    +  +
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 969

Query: 565 VEDLLKLLE 573
           + + L LL+
Sbjct: 970 ISEALLLLD 978



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 163/370 (44%), Gaps = 31/370 (8%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + + Y  +L+   K+   + A+++L  M+  G E     +  L+    + GKL  A  
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V + M +      L   ++ I       +   A + L +M      PNV+ Y  +I G C
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
            + +  +A KL+  M  KGC P+ V+Y  ++                       + F   
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI-----------------------DGFGMI 792

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G+IE   EL+ +M   G  P+ VTY  +++  C+ G LD A  +L++M       +T  Y
Sbjct: 793 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY 852

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              + G   N + +E+  +++   ++   P    Y +++  L +  +L  A  ++ E+  
Sbjct: 853 RKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910

Query: 438 KGFFPTPVE----INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
             F  T V+     N LI+SLC   K++ A +   E   KG    + +F SLI+G  +  
Sbjct: 911 --FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968

Query: 494 DLEEALSLLD 503
            + EAL LLD
Sbjct: 969 KISEALLLLD 978


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 246/500 (49%), Gaps = 29/500 (5%)

Query: 137 YRHDPIV----YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           ++++PI     +  +L  L K K  Q A  + + M   GI+      + LM  +S+ G +
Sbjct: 50  HKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHI 109

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
           + +  V + + K    P+ +     I  L +  ++ KAL F +++   G   + ++Y  L
Sbjct: 110 KFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTL 169

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I G C +   K A++L+  +  K   P+ V Y T++  +CK+K + +  DL  +MV+   
Sbjct: 170 INGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSK-- 227

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                 RI                PDVVTY+++++GFC VG+L  A  +  +M      P
Sbjct: 228 ------RIS---------------PDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINP 266

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N  +++  ++G C  GK  EA+ ++    ++    + +TY+ +M G     ++++A  + 
Sbjct: 267 NVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLF 326

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             M ++G  P     +++I   C+   +D A K  +E   K    NVV + SL+ G C+ 
Sbjct: 327 NVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKS 386

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G    AL L+D+M+   +  + +TY +I+DA+ KN  V++A  L+ K+  KG+ P + TY
Sbjct: 387 GRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTY 446

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLR 610
             +I+  C+VGR++D  K+ E +L K        Y  +I   C+ G+ +E   +L K+  
Sbjct: 447 TVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKD 506

Query: 611 TASKADASTCHVLVESYLNK 630
                +A T  +L+ S   K
Sbjct: 507 NGCIPNAITYEILIHSLFEK 526



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 217/420 (51%), Gaps = 25/420 (5%)

Query: 129 YWADR--QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY 186
           Y+ D+     ++ D + Y  ++  L +    + A ++LR +  + +      +S ++ + 
Sbjct: 149 YFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSM 208

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
            +   + +A  +   M    ++P+++  ++ I    V  KL  A+    RM    I PNV
Sbjct: 209 CKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNV 268

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
            T++ LI G+C   ++++A  ++  M  K    D V+Y ++M   C  K           
Sbjct: 269 YTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVK----------- 317

Query: 307 MVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                       ++ +AK L N M+Q G  PDV +Y+ ++NGFC++  +D+A K+ ++M+
Sbjct: 318 ------------QVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMH 365

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                PN V+Y + ++GLC +G++  A E+++   +     N ITY+ ++  + +   + 
Sbjct: 366 CKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVD 425

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A  ++ ++ +KG  P      +LI  LC+ G++D A+K  ++ L KG + N+  +TSLI
Sbjct: 426 KAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLI 485

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            GFC KG  +E L++L  M      P+ +TY  +I +L +    ++A +L+ +M+++GL+
Sbjct: 486 NGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/506 (23%), Positives = 239/506 (47%), Gaps = 25/506 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F  ++ +  +A + + A+ +   M+   + P+ + CN  ++       +  +     ++ 
Sbjct: 61  FGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKIL 120

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+ +T+  LIKG C    +  A+   D++  +G   D+VSY T++  LC+    K
Sbjct: 121 KKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETK 180

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
               L+ ++          G++                P+VV Y+ +++  C+   ++ A
Sbjct: 181 AAVQLLRRV---------DGKLVR--------------PNVVMYSTIIDSMCKDKLVNDA 217

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +  +M      P+ V+Y++ ++G C  GK   A ++ N    +   PN  T+S+++ G
Sbjct: 218 FDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDG 277

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
             +EGK+ EA +V+  M+KK      V  N L+   C   +++ AK        +G   +
Sbjct: 278 FCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPD 337

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           V +++ +I GFC+   ++EA+ L ++M+  +  P+ VTY +++D L K+GR   A EL+ 
Sbjct: 338 VWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVD 397

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
           +M  +G    ++TY +++   C+   V+  + LL K+  K  Q     Y  +I  LC  G
Sbjct: 398 EMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVG 457

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            L++A K+   +L      +  T   L+  + NKG       +  +M +   IP+    +
Sbjct: 458 RLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYE 517

Query: 657 KVSERLILEGKSEEADTLMLRFVERG 682
            +   L  + ++++A+ L+   + RG
Sbjct: 518 ILIHSLFEKDENDKAEKLLREMIARG 543



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 145/288 (50%), Gaps = 12/288 (4%)

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P  + +   L  L    +   A  +    E     P+ IT +++M+   + G +  +  V
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             +++KKG+ P  V   +LI+ LC +G++  A  F  + + +G  ++ V++ +LI G C+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G+ + A+ LL  +      P+ V Y+TIID++ K+  V +A +L  +M+SK + P VVT
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVL 609
           Y ++I  +C VG+++  + L  +M+S       Y  + +I+  C  G + EA  +L  ++
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 610 RTASKADASTCHVLVESY-----LNKGIPLLAYKVACRMFNRNLIPDL 652
           +   K D  T + L++ Y     +NK   L        M  R + PD+
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNV-----MAQRGVTPDV 338



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/355 (21%), Positives = 165/355 (46%), Gaps = 4/355 (1%)

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           IP  + +  ++    +  +   A  + QQM  +G KP+ ++    +N     G    +  
Sbjct: 55  IPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFS 114

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +     ++ + P+A+T+++++ GL  +G++ +A     ++V +GF    V    LI  LC
Sbjct: 115 VFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLC 174

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           R G+   A + ++    K    NVV ++++I   C+   + +A  L  +M   +  PD V
Sbjct: 175 RVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVV 234

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY+++I      G+++ A +L  +M+S  + P V T+  +I  +C+ G+V +   +L  M
Sbjct: 235 TYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVM 294

Query: 576 LSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           + K  +     YN +++  C    + +A  +   + +     D  +  +++  +    + 
Sbjct: 295 MKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMV 354

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
             A K+   M  + + P++     + + L   G++  A  L+    +RG  QP +
Sbjct: 355 DEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG--QPSN 407


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 250/546 (45%), Gaps = 49/546 (8%)

Query: 123 VALQFFYWADRQWRYRHDPIVYYMML--EILSKTKLCQGAKRVLRLMARR--------GI 172
           +AL+F  W  +Q     + + + + +   +L K +L   AK +L+ +A++        G+
Sbjct: 34  LALKFLKWVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLFGV 93

Query: 173 --------ECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
                      P  F  L+  Y R G + +A+   S M      P++  CN  +  +V  
Sbjct: 94  LMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKN 153

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            +      F ++M  + + PNV ++N LI   C   ++K A+ ++  M   G  P  VSY
Sbjct: 154 CRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSY 213

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            T++ + CK                       +GR + A  L++ M   G   DV TY  
Sbjct: 214 NTLLSWCCK-----------------------KGRFKFALVLIHHMECKGIQADVCTYNM 250

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
            ++  CR     Q   +L++M +    PN VSY   +NG    GK   A  + N   E  
Sbjct: 251 FIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELN 310

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
            +PN ITY+++++G    G   EA  V+  M      P  V I  L+  L +  K D A+
Sbjct: 311 LSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVAR 370

Query: 465 KFMQE-CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTII 521
             ++  C+N+  ++N ++ T +I G C+ G L+EA  LL +M  CK    PD +T++ +I
Sbjct: 371 NILERYCINR-TSLNCISHTVMIDGLCRNGLLDEAFQLLIEM--CKDGVHPDIITFSVLI 427

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-LSKQK 580
           +   K G + +A E+M K+  +G VP  V + T+I+  C+VG V + +K    M L+ Q 
Sbjct: 428 NGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQN 487

Query: 581 CRT-AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                 N ++ +LC  G L EA + L  + R     ++ T   ++  Y N G    A+ V
Sbjct: 488 ADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSV 547

Query: 640 ACRMFN 645
             RM +
Sbjct: 548 FDRMIS 553



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 135/565 (23%), Positives = 256/565 (45%), Gaps = 51/565 (9%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGI 172
           +VL  Q   + A+      +R   Y    + Y  +L    K    + A  ++  M  +GI
Sbjct: 183 SVLCVQGKLKKAVNILTMMERNG-YVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGI 241

Query: 173 ECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           +     ++  + +  R  +      VL  M+   + PN +  NT I+  V   K+  A R
Sbjct: 242 QADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATR 301

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
               M    ++PN++TYN LI GYC     ++A++++D M      P++V+  T++  L 
Sbjct: 302 VFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLY 361

Query: 293 KEKRIKEVRDLMEKM-VNDSNL-----------FHDQGRIEEAKELVNQMSQMGCIPDVV 340
           K  +    R+++E+  +N ++L               G ++EA +L+ +M + G  PD++
Sbjct: 362 KSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDII 421

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF-------------------- 380
           T++ ++NGFC+VG +++AK+++ ++Y  G  PN V ++                      
Sbjct: 422 TFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAM 481

Query: 381 -LNG--------------LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
            LNG              LC NGK +EA E ++        PN++T+  +++G    G  
Sbjct: 482 NLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDG 541

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
           S A  V   M+  G  P+P     L++ LC+      A+K +++      AV+ +++ +L
Sbjct: 542 SGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTL 601

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I    + G+L EA+ L ++M      PD+ TYT I+  L + GR+  A   + +++ K +
Sbjct: 602 IVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEI 661

Query: 546 VP-TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAG 602
           +    + Y   I    + G+ +  L L ++M  K       A N + +     G +  A 
Sbjct: 662 LTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSAS 721

Query: 603 KILGKVLRTASKADASTCHVLVESY 627
            ++ K        + +T ++L+  Y
Sbjct: 722 SLISKTRNKNVIPNLTTFNILLHGY 746



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 134/541 (24%), Positives = 229/541 (42%), Gaps = 50/541 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I + +++    K      AK V+  + R G       FS L+    + G +  AM   
Sbjct: 419 DIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFY 478

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M       +   CN+ +  L    KL +A  FL  +   G+ PN +T++C+I GY ++
Sbjct: 479 AAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANV 538

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VND 310
                A  + D M   G  P   +Y +++  LCK +   E R L++K+         ++ 
Sbjct: 539 GDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISY 598

Query: 311 SNLF---HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ-MY 366
           + L       G + EA  L  +M Q   +PD  TYT +++G  R G L  A   L + M 
Sbjct: 599 NTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQ 658

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKS-----------------------------------L 391
                 N++ YT F++GL   G+S                                    
Sbjct: 659 KEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVF 718

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
            A  +I+ +  +   PN  T+++++HG  R   +     +   M + GFFP  +  + LI
Sbjct: 719 SASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLI 778

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LC  G ++   K ++  + +   ++ + F  LIR  C+  DL++ + L  +M + +  
Sbjct: 779 LGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVS 838

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
            D  T   + D L +    +     M +ML KG +PT   Y T++ R C+VG ++   KL
Sbjct: 839 LDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKL 898

Query: 572 LEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
            ++M  L       A   ++  L   G +EEA  IL ++LR       ST   L+  +  
Sbjct: 899 KDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCK 958

Query: 630 K 630
           K
Sbjct: 959 K 959



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/491 (23%), Positives = 211/491 (42%), Gaps = 63/491 (12%)

Query: 128  FYWADRQWRYRH--DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA 185
            F   DR     H   P  Y  +L++L K +    A+++L+ +    +     +++ L+V 
Sbjct: 545  FSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVE 604

Query: 186  YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER-MQLAGITP 244
             S++G L  A+ +   M +  + P+       +  L+   +L  A  FL R MQ   +T 
Sbjct: 605  ISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTL 664

Query: 245  NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
            N + Y C I G     + K A+ L  EM  KG S D ++             +  + D  
Sbjct: 665  NSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIA-------------LNSITDGY 711

Query: 305  EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
             +M          G++  A  L+++      IP++ T+  +++G+ R  ++    K+   
Sbjct: 712  SRM----------GKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNL 761

Query: 365  MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM------HG 418
            M   G  PN ++Y + + GLC++G      +M+     E  T + +T+++++      + 
Sbjct: 762  MRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEIND 821

Query: 419  LRREGKLSEACDVVR-----------------------------EMVKKGFFPTPVEINL 449
            L +   L+   +V R                             EM+KKGF PT  +   
Sbjct: 822  LDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCT 881

Query: 450  LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
            +++ +CR G + GA K   + +  G +++     +++RG    G +EEA+ +L  M   K
Sbjct: 882  MMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMK 941

Query: 510  KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
            K P T T+TT++    K    +EA  L + M    +   +V Y  +I   C  G V   L
Sbjct: 942  KIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITAL 1001

Query: 570  KLLEKMLSKQK 580
               E++  KQK
Sbjct: 1002 DFYEEI--KQK 1010



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 92/419 (21%), Positives = 167/419 (39%), Gaps = 47/419 (11%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            + IVY   ++ L K    + A  + + M  +G+     A + +   YSR GK+ +A  ++
Sbjct: 665  NSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLI 724

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            S  +   V PNL   N  +H    G  +    +    M+ +G  PN LTY+ LI G C+ 
Sbjct: 725  SKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNH 784

Query: 260  HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-VNDSNLFHDQG 318
              ++  IK++     +  + D +++  ++   C+   + +V DL   M V   +L  D  
Sbjct: 785  GMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQ 844

Query: 319  RIEE---AKELVNQ--------MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
            +       + +V+Q        M + G IP    Y  ++   CRVG++  A K+  QM  
Sbjct: 845  KAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVA 904

Query: 368  HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
             G   +  +  A + GL   GK           EE  W                      
Sbjct: 905  LGISLDDAAECAMVRGLALCGKI----------EEAMW---------------------- 932

Query: 428  ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
               +++ M++    PT      L+   C++     A        +    +++V +  LI 
Sbjct: 933  ---ILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLIS 989

Query: 488  GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
              C  GD+  AL   +++      P+  TY  ++ A+S    V     ++  +  +GLV
Sbjct: 990  ACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLV 1048



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 85/199 (42%), Gaps = 7/199 (3%)

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           C+ N   F  LIR + ++G +  A++    M +    P   T   I+ ++ KN R     
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVW 160

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENL 592
               +ML+  + P V ++  +I   C  G+++  + +L  M       T  +YN ++   
Sbjct: 161 SFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWC 220

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G  + A  ++  +     +AD  T ++ ++S          Y V  +M N+ + P+ 
Sbjct: 221 CKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPN- 279

Query: 653 KLCKKVSERLILEGKSEEA 671
               +VS   ++ G  +E 
Sbjct: 280 ----EVSYNTLINGFVKEG 294


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 147/569 (25%), Positives = 261/569 (45%), Gaps = 101/569 (17%)

Query: 134 QWRYRH------DPIVYYMMLEI--LSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LM 183
            W Y+        P  Y + L I  L  +   + A+ V   M  +G  CRP  FS+  L+
Sbjct: 136 SWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKG--CRPNEFSFGILV 193

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             Y RAG    A+ +L  M    V PN +I NT I       +  +A R +ERM+  G+ 
Sbjct: 194 RGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLF 253

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEM----PLKGCSPDKVSYYTVMGYLCKEKRIKE 299
           P+V+T+N  I   C   +I +A ++  +M     L    P+  ++  ++   CKE     
Sbjct: 254 PDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKE----- 308

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                             G +EEAK LV  M + G + ++ +Y   + G  R G+L +A+
Sbjct: 309 ------------------GMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQ 350

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
             L++M   G +PN  S+   ++GLC NG   +AR ++         P+ +TYS ++HG 
Sbjct: 351 LALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGC 410

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
              GK+ +A +++ EM+++G  P     N+L+ SL +EG++  A+K +Q+   +   ++ 
Sbjct: 411 CSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDN 470

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD-----------------------PDTVT 516
           V    +I G C+ G L+EA+ +++ M++                           PD +T
Sbjct: 471 VTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLIT 530

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y+ II+ L K GR++EA +  ++M+ K L P  + Y T IH +C+ G++    ++L+ M 
Sbjct: 531 YSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDM- 589

Query: 577 SKQKCRTA--------------------------------------YNQVIENLCSFGYL 598
            K+ C  +                                      YN +I  LC  G +
Sbjct: 590 EKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRI 649

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESY 627
           ++A  +L ++L+     + S+  +L++++
Sbjct: 650 KDATSLLDEMLQKGISPNISSFRLLIKAF 678



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 250/544 (45%), Gaps = 71/544 (13%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R +   + +MLE   K  + + AK ++  M R G     E+++  ++   R GKL  A  
Sbjct: 292 RPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQL 351

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            L  M    + PN+   NT +  L     ++ A   +  M  +GI P+ +TY+ L+ G C
Sbjct: 352 ALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCC 411

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              ++  A  ++ EM  +GCSP+  +   ++  L KE                       
Sbjct: 412 STGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKE----------------------- 448

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GRI EA++L+ +M++     D VT   V++G C+ G+LD+A ++++ M+ HG        
Sbjct: 449 GRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHG-------- 500

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +A L  L ++   L    + ++S  +   P+ ITYS++++GL + G+L EA     EMV 
Sbjct: 501 SAALGNLGNSFIGL----VDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVG 556

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           K   P  +  +  I S C+ GK+  A + +++   +GC  ++  + SLI G   K  + E
Sbjct: 557 KSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFE 616

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
              LLDDM      P+  TY  +I  L + GR+++AT L+ +ML KG+ P + ++R +I 
Sbjct: 617 IYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIK 676

Query: 558 RYCQV----------------------------------GRVEDLLKLLEKMLSK--QKC 581
            +C+                                   G V +  +L +  L +     
Sbjct: 677 AFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLG 736

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              YN +IE LC    LE A  IL K++    + D ++   +++    +G    A ++A 
Sbjct: 737 NFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAE 796

Query: 642 RMFN 645
           RM +
Sbjct: 797 RMMD 800



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 205/413 (49%), Gaps = 37/413 (8%)

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
           Q  A  P + + N  +   +  +K+       + M +AG++P   T N LI G CD  R 
Sbjct: 108 QVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRF 167

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
           +DA ++ D+M +KGC P++ S+  ++   C+                        G    
Sbjct: 168 EDAREVFDKMGVKGCRPNEFSFGILVRGYCR-----------------------AGLSMR 204

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A EL++ M   G  P+ V Y  +++ FCR G  ++A++++++M   G  P+ V++ + ++
Sbjct: 205 ALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRIS 264

Query: 383 GLCHNGKSLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
            LC  GK LEA    R+M    E     PN  T+++++ G  +EG L EA  +V  M + 
Sbjct: 265 ALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRN 324

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G        N+ +  L R GK+  A+  ++E ++KG   N+ +F +++ G C+ G + +A
Sbjct: 325 GNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDA 384

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             ++  M      PDTVTY+T++      G+V +A  ++ +M+ +G  P   T   ++H 
Sbjct: 385 RMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHS 444

Query: 559 YCQVGRVEDLLKLLEKM------LSKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
             + GR+ +  KLL+KM      L    C    N VI+ LC  G L+EA +I+
Sbjct: 445 LWKEGRIFEAEKLLQKMNERSYDLDNVTC----NIVIDGLCKSGKLDEAVEIV 493


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 235/520 (45%), Gaps = 78/520 (15%)

Query: 161 KRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
           KRVL +M   G    P+ F+ L+ AY  +G    A  +L  M K    P  ++ N  I  
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416

Query: 221 LVVGNK-------LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
            + G+K       L  A +    M  AG+  N +  +   +  C   + + A  +I EM 
Sbjct: 417 -ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDS-------NLFHDQGRIE 321
            +G  PD  +Y  V+ YLC   +++    L E+M     V D        + F   G IE
Sbjct: 476 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC----------- 370
           +A++  N+M ++GC P+VVTYTA+++ + +  ++  A ++ + M   GC           
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595

Query: 371 ----------------------------------------KPNTVSYTAFLNGLCHNGKS 390
                                                   +PN V+Y A L+G C + + 
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 655

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EAR++++    E   PN I Y  ++ GL + GKL EA +V  EM + GF  T    + L
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSL 715

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I    +  + D A K + + L   CA NVV +T +I G C+ G  +EA  L+  M     
Sbjct: 716 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC 775

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P+ VTYT +ID     G++E   EL+ +M SKG+ P  VTYR +I   C+ G ++    
Sbjct: 776 QPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHN 835

Query: 571 LLEKM-LSKQKCRTA-YNQVIENLC-----SFGYLEEAGK 603
           LLE+M  +     TA Y +VIE        S G L+E G+
Sbjct: 836 LLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQ 875



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 157/660 (23%), Positives = 277/660 (41%), Gaps = 77/660 (11%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           LR     L    +  VLR  A     + FF WA RQ  Y+H   VY  +++++ +    +
Sbjct: 123 LRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEK 182

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
             +  L+ +     E   E  + L+  + R G    A+  L  ++     P+    N  I
Sbjct: 183 VPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLI 242

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
              +  ++L  A      M LA +  +  T  C     C + + ++A+ L++    +   
Sbjct: 243 QAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFV 299

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH------------DQGRIEEAKEL 326
           PD V Y  ++  LC+    +E  D + +M   S L +            ++ ++   K +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           +N M   GC P    + ++V+ +C  G+   A K+L++M   G  P  V Y   +  +C 
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419

Query: 387 NGKSLEAREMINTSEEEWW-------TPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
           +  SL   ++++ +E+ +          N I  S     L   GK  +A  V+REM+ +G
Sbjct: 420 DKDSLNC-DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           F P     + ++  LC   KM+ A    +E    G   +V  +T ++  FC+ G +E+A 
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
              ++M      P+ VTYT +I A  K  +V  A EL   MLS+G +P +VTY  +I  +
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598

Query: 560 CQVGRVEDLLKLLEKM-------------------------------------------- 575
           C+ G+VE   ++ E+M                                            
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658

Query: 576 ------LSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
                 +S + C   +  Y+ +I+ LC  G L+EA ++  ++      A   T   L++ 
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           Y       LA KV  +M   +  P++ +  ++ + L   GK++EA  LM    E+G  QP
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG-CQP 777



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 221/489 (45%), Gaps = 82/489 (16%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y +M++   K  L + A++    M  R + C P   +Y  L+ AY +A K+  A  
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTALIHAYLKAKKVSYANE 574

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM----QLAGIT---------- 243
           +   M      PN++  +  I       ++ KA +  ERM     +  +           
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634

Query: 244 --PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             PNV+TY  L+ G+C  HR+++A KL+D M ++GC P+++ Y  ++  LCK        
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK-------- 686

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                           G+++EA+E+  +MS+ G    + TY+++++ + +V   D A K+
Sbjct: 687 ---------------VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L +M  + C PN V YT  ++GLC  GK+ EA +++   EE+   PN +TY+ ++ G   
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            GK+    +++  M  KG  P  V   +LI   C+ G +D A   ++E        +   
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDP----------------------------- 512
           +  +I GF    +  E+L LLD++      P                             
Sbjct: 852 YRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909

Query: 513 --------DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
                    + TY ++I++L    +VE A +L  +M  KG++P + ++ ++I    +  +
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 969

Query: 565 VEDLLKLLE 573
           + + L LL+
Sbjct: 970 ISEALLLLD 978



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 163/370 (44%), Gaps = 31/370 (8%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + + Y  +L+   K+   + A+++L  M+  G E     +  L+    + GKL  A  
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V + M +      L   ++ I       +   A + L +M      PNV+ Y  +I G C
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
            + +  +A KL+  M  KGC P+ V+Y  ++                       + F   
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI-----------------------DGFGMI 792

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G+IE   EL+ +M   G  P+ VTY  +++  C+ G LD A  +L++M       +T  Y
Sbjct: 793 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY 852

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              + G   N + +E+  +++   ++   P    Y +++  L +  +L  A  ++ E+  
Sbjct: 853 RKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910

Query: 438 KGFFPTPVE----INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
             F  T V+     N LI+SLC   K++ A +   E   KG    + +F SLI+G  +  
Sbjct: 911 --FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968

Query: 494 DLEEALSLLD 503
            + EAL LLD
Sbjct: 969 KISEALLLLD 978



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 145/310 (46%), Gaps = 15/310 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           IVY  +++ L K      A+ V   M+  G       +S L+  Y +  +   A  VLS 
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M + + APN++I    I  L    K  +A + ++ M+  G  PNV+TY  +I G+  + +
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR-- 319
           I+  ++L++ M  KG +P+ V+Y  ++ + CK   +    +L+E+M       H  G   
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854

Query: 320 -IE-------EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM--YHHG 369
            IE       E+  L++++ Q    P +  Y  +++   +   L+ A ++L+++  +   
Sbjct: 855 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA- 428
               + +Y + +  LC   K   A ++ +   ++   P   ++  ++ GL R  K+SEA 
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974

Query: 429 --CDVVREMV 436
              D +  MV
Sbjct: 975 LLLDFISHMV 984


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 235/520 (45%), Gaps = 78/520 (15%)

Query: 161 KRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
           KRVL +M   G    P+ F+ L+ AY  +G    A  +L  M K    P  ++ N  I  
Sbjct: 316 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 375

Query: 221 LVVGNK-------LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
            + G+K       L  A +    M  AG+  N +  +   +  C   + + A  +I EM 
Sbjct: 376 -ICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 434

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDS-------NLFHDQGRIE 321
            +G  PD  +Y  V+ YLC   +++    L E+M     V D        + F   G IE
Sbjct: 435 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 494

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC----------- 370
           +A++  N+M ++GC P+VVTYTA+++ + +  ++  A ++ + M   GC           
Sbjct: 495 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 554

Query: 371 ----------------------------------------KPNTVSYTAFLNGLCHNGKS 390
                                                   +PN V+Y A L+G C + + 
Sbjct: 555 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 614

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EAR++++    E   PN I Y  ++ GL + GKL EA +V  EM + GF  T    + L
Sbjct: 615 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSL 674

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I    +  + D A K + + L   CA NVV +T +I G C+ G  +EA  L+  M     
Sbjct: 675 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC 734

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P+ VTYT +ID     G++E   EL+ +M SKG+ P  VTYR +I   C+ G ++    
Sbjct: 735 QPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHN 794

Query: 571 LLEKM-LSKQKCRTA-YNQVIENLC-----SFGYLEEAGK 603
           LLE+M  +     TA Y +VIE        S G L+E G+
Sbjct: 795 LLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQ 834



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 156/660 (23%), Positives = 277/660 (41%), Gaps = 77/660 (11%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           LR     L    +  VLR  A     + FF WA RQ  Y+H   VY  +++++ +    +
Sbjct: 82  LRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEK 141

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
             +  L+ +     E   +  + L+  + R G    A+  L  ++     P+    N  I
Sbjct: 142 VPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLI 201

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
              +  ++L  A      M LA +  +  T  C     C + + ++A+ L++    +   
Sbjct: 202 QAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFV 258

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH------------DQGRIEEAKEL 326
           PD V Y  ++  LC+    +E  D + +M   S L +            ++ ++   K +
Sbjct: 259 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 318

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           +N M   GC P    + ++V+ +C  G+   A K+L++M   G  P  V Y   +  +C 
Sbjct: 319 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 378

Query: 387 NGKSLEAREMINTSEEEWW-------TPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
           +  SL   ++++ +E+ +          N I  S     L   GK  +A  V+REM+ +G
Sbjct: 379 DKDSLNF-DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 437

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           F P     + ++  LC   KM+ A    +E    G   +V  +T ++  FC+ G +E+A 
Sbjct: 438 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 497

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
              ++M      P+ VTYT +I A  K  +V  A EL   MLS+G +P +VTY  +I  +
Sbjct: 498 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 557

Query: 560 CQVGRVEDLLKLLEKM-------------------------------------------- 575
           C+ G+VE   ++ E+M                                            
Sbjct: 558 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 617

Query: 576 ------LSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
                 +S + C   +  Y+ +I+ LC  G L+EA ++  ++      A   T   L++ 
Sbjct: 618 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 677

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           Y       LA KV  +M   +  P++ +  ++ + L   GK++EA  LM    E+G  QP
Sbjct: 678 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG-CQP 736



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 221/489 (45%), Gaps = 82/489 (16%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y +M++   K  L + A++    M  R + C P   +Y  L+ AY +A K+  A  
Sbjct: 476 DVYTYTIMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTALIHAYLKAKKVSYANE 533

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM----QLAGIT---------- 243
           +   M      PN++  +  I       ++ KA +  ERM     +  +           
Sbjct: 534 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 593

Query: 244 --PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             PNV+TY  L+ G+C  HR+++A KL+D M ++GC P+++ Y  ++  LCK        
Sbjct: 594 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK-------- 645

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                           G+++EA+E+  +MS+ G    + TY+++++ + +V   D A K+
Sbjct: 646 ---------------VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 690

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L +M  + C PN V YT  ++GLC  GK+ EA +++   EE+   PN +TY+ ++ G   
Sbjct: 691 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 750

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            GK+    +++  M  KG  P  V   +LI   C+ G +D A   ++E        +   
Sbjct: 751 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 810

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDP----------------------------- 512
           +  +I GF    +  E+L LLD++      P                             
Sbjct: 811 YRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 868

Query: 513 --------DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
                    + TY ++I++L    +VE A +L  +M  KG++P + ++ ++I    +  +
Sbjct: 869 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 928

Query: 565 VEDLLKLLE 573
           + + L LL+
Sbjct: 929 ISEALLLLD 937



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 163/370 (44%), Gaps = 31/370 (8%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + + Y  +L+   K+   + A+++L  M+  G E     +  L+    + GKL  A  
Sbjct: 595 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 654

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V + M +      L   ++ I       +   A + L +M      PNV+ Y  +I G C
Sbjct: 655 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 714

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
            + +  +A KL+  M  KGC P+ V+Y  ++                       + F   
Sbjct: 715 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI-----------------------DGFGMI 751

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G+IE   EL+ +M   G  P+ VTY  +++  C+ G LD A  +L++M       +T  Y
Sbjct: 752 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY 811

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              + G   N + +E+  +++   ++   P    Y +++  L +  +L  A  ++ E+  
Sbjct: 812 RKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 869

Query: 438 KGFFPTPVE----INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
             F  T V+     N LI+SLC   K++ A +   E   KG    + +F SLI+G  +  
Sbjct: 870 --FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 927

Query: 494 DLEEALSLLD 503
            + EAL LLD
Sbjct: 928 KISEALLLLD 937



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 145/310 (46%), Gaps = 15/310 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           IVY  +++ L K      A+ V   M+  G       +S L+  Y +  +   A  VLS 
Sbjct: 634 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 693

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M + + APN++I    I  L    K  +A + ++ M+  G  PNV+TY  +I G+  + +
Sbjct: 694 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 753

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR-- 319
           I+  ++L++ M  KG +P+ V+Y  ++ + CK   +    +L+E+M       H  G   
Sbjct: 754 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 813

Query: 320 -IE-------EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM--YHHG 369
            IE       E+  L++++ Q    P +  Y  +++   +   L+ A ++L+++  +   
Sbjct: 814 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 873

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA- 428
               + +Y + +  LC   K   A ++ +   ++   P   ++  ++ GL R  K+SEA 
Sbjct: 874 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 933

Query: 429 --CDVVREMV 436
              D +  MV
Sbjct: 934 LLLDFISHMV 943


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 227/473 (47%), Gaps = 31/473 (6%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L +A  R+G+L   ++      +   APN+   N  I  L    +LA+A     RM+  G
Sbjct: 165 LRLARDRSGRLVRRLF------EQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMG 218

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             P+V+T+N LI GY     + +  +L++EM   GC  D V+Y  ++   CK        
Sbjct: 219 CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK-------- 270

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                           GR+E A      M + G + +VVT++  V+ FC+ G + +A K+
Sbjct: 271 ---------------FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKL 315

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             QM   G   N  +YT  ++G C  G+  +A  +++    +    N +TY+V++ GL +
Sbjct: 316 FAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCK 375

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           E K++EA DV+R M K G     +    LI         + A   + E  NKG  +++  
Sbjct: 376 ERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISL 435

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           + +LI+G C    L+EA SLL  M     +P+ + YTT++DA  K+G+V EA  ++ K+L
Sbjct: 436 YGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKIL 495

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLE 599
             G  P V+TY  +I   C+ G +++ +    KM  L       AY  +++ LC  G L 
Sbjct: 496 DSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLN 555

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           EA ++  +++      D      L++ YL +G    A+ +  +M +  L  DL
Sbjct: 556 EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDL 608



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 210/421 (49%), Gaps = 12/421 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R G +     ++ L+  + + G++  A    + M++  V  N++  +T +        
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +A++   +M++ G+  N  TY CLI G C   R+ DAI L+DEM  +G   + V+Y  
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368

Query: 287 VMGYLCKEKRIKEVRDLMEKM------VND---SNLFHDQ---GRIEEAKELVNQMSQMG 334
           ++  LCKE+++ E  D++  M       N+   + L H        E+A  L+++M   G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
              D+  Y A++ G C V +LD+AK +L +M   G +PN + YT  ++    +GK  EA 
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            M+    +  + PN ITY  ++ GL + G + EA     +M   G  P       L+  L
Sbjct: 489 AMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGL 548

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G ++ A +   E ++KG +++ V +T+L+ G+ ++G+L +A +L   M       D 
Sbjct: 549 CKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDL 608

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
             YT  I        + EA E+  +M+  G+ P    Y  +I +Y ++G +E+ + L ++
Sbjct: 609 FCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDE 668

Query: 575 M 575
           M
Sbjct: 669 M 669



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 226/472 (47%), Gaps = 16/472 (3%)

Query: 176 PEAFSYLMVA--YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P  F++ +V     + G+L  A  + S M++    P+++  N+ I       +L +  + 
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           +E M+ +G   +V+TYN LI  +C   R++ A      M  +G   + V++ T +   CK
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 294 EKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKELVNQMSQMGCIPDVVT 341
           E  ++E   L  +M       ++             GR+++A  L+++M + G   +VVT
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           YT +V+G C+  ++ +A+ +L+ M   G + N + YT  ++G   N  S +A  +++  +
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
            +    +   Y  ++ GL    KL EA  ++ +M + G  P  +    ++ +  + GK+ 
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A   +Q+ L+ G   NV+ + +LI G C+ G ++EA+S  + M     DP+   YT ++
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--Q 579
           D L KNG + EA +L  +M+ KG+    V Y  ++  Y + G + D   L  KM+    Q
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
                Y   I   C+   + EA ++  +++      D +  + L+  Y   G
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLG 657



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 137/549 (24%), Positives = 251/549 (45%), Gaps = 33/549 (6%)

Query: 149 EILSKTKLCQGAKRVL-RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV 207
            +L++ +L   ++RVL RL+A R    RP       +A S    L  A   L   + A  
Sbjct: 73  HLLARDRLYAHSRRVLSRLVALR----RPH------LAASLVDLLHRAALALGPRRSALA 122

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
           +    + +T + VL     L  A+R + R++   + PN  T N ++         +   +
Sbjct: 123 S----VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRR 178

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHDQG 318
           L +++P    +P+  ++  V+ +LCKE  + E R L  +M         V  ++L    G
Sbjct: 179 LFEQLP----APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYG 234

Query: 319 R---IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
           +   ++E ++LV +M + GC  DVVTY A++N FC+ G ++ A      M   G   N V
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVV 294

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +++ F++  C  G   EA ++           N  TY+ ++ G  + G+L +A  ++ EM
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           V++G     V   +L+  LC+E K+  A+  ++     G   N + +T+LI G     + 
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           E+AL LL +M     + D   Y  +I  L    +++EA  L+ KM   GL P  + Y T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +    + G+V + + +L+K+L    Q     Y  +I+ LC  G ++EA     K+     
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             +      LV+     G    A ++   M ++ +  D  +   + +  + +G   +A  
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594

Query: 674 LMLRFVERG 682
           L  + ++ G
Sbjct: 595 LKAKMIDSG 603



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 23/298 (7%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + ++Y  ++      K  + A  +L  M  +G+E     +  L+       KL  A  
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L+ M ++ + PN +I  T +       K+ +A+  L+++  +G  PNV+TY  LI G C
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               I +AI   ++M   G  P+  +Y  ++  LCK                        
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK-----------------------N 551

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G + EA +L N+M   G   D V YTA+++G+ + G L  A  +  +M   G + +   Y
Sbjct: 552 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCY 611

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           T F++G C+     EARE+ +        P+   Y+ ++   ++ G L EA  +  EM
Sbjct: 612 TCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/207 (20%), Positives = 94/207 (45%), Gaps = 8/207 (3%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           ++ + I Y  +++ L K      A      M   G++   +A++ L+    + G L  A+
Sbjct: 499 FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAV 558

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            + + M    ++ + ++    +   +    L  A     +M  +G+  ++  Y C I G+
Sbjct: 559 QLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGF 618

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEKMV---ND 310
           C+L+ + +A ++  EM   G +PD+  Y  ++    K   ++E   ++D ME+++    D
Sbjct: 619 CNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTD 678

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIP 337
           S+   D G +   K +  Q+  +G  P
Sbjct: 679 SDTATDAGSVCTTKCIRCQI--LGSTP 703


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 234/494 (47%), Gaps = 25/494 (5%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +L  M R G       +S  +    R G + +A+  +  +  A    N+   N  IH
Sbjct: 274 ATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIH 333

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    +L +AL+ LE M+  GI+P+V TY+ LI G+C    ++  + LI+EM      P
Sbjct: 334 GLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEP 393

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
             VSY ++   LCK KR+ ++           ++F D G               G   D 
Sbjct: 394 SLVSYSSLFHGLCK-KRLSDI---------SLDIFRDLG-------------AAGYKYDQ 430

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
             Y+ ++ GFC  G+LD A K++++M  +   P+  ++ + ++G C  G  + A E  N 
Sbjct: 431 TAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNM 490

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             E    P+  T +V++    REG++ EA +++ EM  +G FP     N +I  LC+E K
Sbjct: 491 MLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERK 550

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
            + A +     L +    +VV +++LI GF ++ + ++AL L   M      PD V YT 
Sbjct: 551 SERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTI 610

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +I+ L    R+ EA  L  KM   G+ P  ++Y +VI  +C++G +     L  +ML + 
Sbjct: 611 LINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRG 670

Query: 580 KCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
              T   Y  +++  C    ++ A  ++ ++ R     D  T +VL+ ++  +G    A 
Sbjct: 671 HLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKAL 730

Query: 638 KVACRMFNRNLIPD 651
           ++   M    ++PD
Sbjct: 731 EMLNEMKENGVLPD 744



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 228/515 (44%), Gaps = 31/515 (6%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            F  L+  ++    L NA+ V    +K  +  +   CN  +  L   N+        E M
Sbjct: 181 VFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEM 240

Query: 238 QLAGITPNVLTYNCLIKGYCDLH------RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
           +  G  PNV TY  ++  YC  +        + A ++++EM   G SP  V+Y T +  L
Sbjct: 241 KSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGL 300

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           C+                        G +E A + V  +     + +V  Y A+++G C+
Sbjct: 301 CR-----------------------VGYVESALDFVRSLISANGLVNVYCYNAIIHGLCK 337

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            GELD+A K+L++M   G  P+  +Y+  ++G C  G   +   +I   +     P+ ++
Sbjct: 338 KGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVS 397

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           YS + HGL ++     + D+ R++   G+       ++LI+  C +G +D A K M+E +
Sbjct: 398 YSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMV 457

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
               A +  NF SL+ GFC+ G    AL   + M      P   T   IIDA  + GRVE
Sbjct: 458 RNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVE 517

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVI 589
           EA  LM +M ++G+ P + TY  VI+R C+  + E  L+L   ML +    +   Y+ +I
Sbjct: 518 EALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLI 577

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           +        ++A  +  ++L+     D     +L+    ++     AY +  +M    + 
Sbjct: 578 DGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMT 637

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           PD      V       G   +A  L    ++RGH+
Sbjct: 638 PDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHL 672



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 193/405 (47%), Gaps = 12/405 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A +VL  M   GI      +S L+  + + G +   +Y++  M+ + + P+L+  ++  H
Sbjct: 344 ALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFH 403

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L        +L     +  AG   +   Y+ LIKG+C    +  A KL++EM     +P
Sbjct: 404 GLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAP 463

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDSNLFHD----QGRIEEAKELV 327
           D  ++ +++   CK        +    M        +   N+  D    +GR+EEA  L+
Sbjct: 464 DPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLM 523

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           N+M   G  P++ TY AV+N  C+  + ++A ++   M      P+ V Y+  ++G    
Sbjct: 524 NEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQ 583

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
             S +A  +     +   TP+ + Y+++++ L    ++ EA ++ ++M + G  P  +  
Sbjct: 584 SNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISY 643

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             +I   CR G M  A     E L +G    VV +TSL+ G+C+   ++ A  L+D+M  
Sbjct: 644 TSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKR 703

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
               PD VTY  +I A  + G +++A E++ +M   G++P  +TY
Sbjct: 704 KGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY 748



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 176/376 (46%), Gaps = 23/376 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +   L K +L   +  + R +   G +    A+S L+  +   G L +A  ++  
Sbjct: 396 VSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEE 455

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  +AP+     + +H          AL F   M   GI P++ T N +I  +C   R
Sbjct: 456 MVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGR 515

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +++A+ L++EM  +G  P+  +Y  V+  LCKE+                       + E
Sbjct: 516 VEEALNLMNEMQTQGIFPNLFTYNAVINRLCKER-----------------------KSE 552

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A EL   M +   +P VV Y+ +++GF +     +A  +  +M   G  P+ V+YT  +
Sbjct: 553 RALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILI 612

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           N LCH  +  EA  +     E   TP+ I+Y+ V+ G  R G + +A  +  EM+++G  
Sbjct: 613 NILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHL 672

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           PT V    L+   C+  ++D A   + E   KG   +VV +  LI    ++G+L++AL +
Sbjct: 673 PTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEM 732

Query: 502 LDDMYLCKKDPDTVTY 517
           L++M      PD +TY
Sbjct: 733 LNEMKENGVLPDHMTY 748



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 155/318 (48%), Gaps = 12/318 (3%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y++D   Y ++++          A +++  M R  +   P  F  L+  + + G   NA+
Sbjct: 426 YKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNAL 485

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
              +MM +  + P++  CN  I       ++ +AL  +  MQ  GI PN+ TYN +I   
Sbjct: 486 EFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRL 545

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
           C   + + A++L   M  +   P  V Y T++    K+   ++   L  +M+        
Sbjct: 546 CKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDM 605

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  N+   + R+ EA  L  +M++ G  PD ++YT+V+ GFCR+G++ +A  +  +
Sbjct: 606 VAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNE 665

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G  P  V+YT+ ++G C   +   A  +I+  + +  TP+ +TY+V++   RR G 
Sbjct: 666 MLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGN 725

Query: 425 LSEACDVVREMVKKGFFP 442
           L +A +++ EM + G  P
Sbjct: 726 LDKALEMLNEMKENGVLP 743



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 165/346 (47%), Gaps = 10/346 (2%)

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V+ +  ++  F     L+ A  +  Q    G + +T S    L  L    +    R +  
Sbjct: 179 VIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFE 238

Query: 399 TSEEEWWTPNAITYSVVMH----GLRREGKLS--EACDVVREMVKKGFFPTPVEINLLIQ 452
             +     PN  TY+++M+    G   E  +   +A +++ EM + G  PT V  +  I 
Sbjct: 239 EMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIY 298

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LCR G ++ A  F++  ++    VNV  + ++I G C+KG+L+EAL +L++M  C   P
Sbjct: 299 GLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISP 358

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D  TY+ +I    K G VE+   L+ +M    + P++V+Y ++ H  C+  R+ D+   +
Sbjct: 359 DVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCK-KRLSDISLDI 417

Query: 573 EKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
            + L     +   TAY+ +I+  C  G L+ A K++ +++R     D S    LV  +  
Sbjct: 418 FRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCK 477

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
            G+ + A +    M    ++P +  C  + +    EG+ EEA  LM
Sbjct: 478 MGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLM 523


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 243/482 (50%), Gaps = 26/482 (5%)

Query: 174 CRPEAFS----YLMVAYSRAG----KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
           CR  AFS    Y      R G    +L +A+ +  +M ++   P+++  +  +  +   N
Sbjct: 33  CRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMN 92

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           K    + F E+M++ GI+ N+ TYN LI  +C   R+  A+ L+ +M   G  PD V+  
Sbjct: 93  KFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLN 152

Query: 286 TVMGYLCKEKRIKEVRDLMEKMV---------NDSNLFHD---QGRIEEAKELVNQMSQM 333
           +++   C   RI +   L+++MV           + L H      +  EA  L+++M Q 
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR 212

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           GC PD+VTY AVVNG C+ G+ D A  +L +M     + N V Y+  ++ LC      +A
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
             +    E +   PN ITYS ++  L   G+ S+A  ++ +M+++   P  V  + LI +
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD-- 511
             ++GK+  A+K  +E + +    N+  ++SLI GFC    L EA  +L+ M   +KD  
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM--IRKDCL 390

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P+ VTY T+I+   K  RV++  EL  +M  +GLV   VTY T+IH + Q    ++   +
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450

Query: 572 LEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
            ++M+S         YN +++ LC  G L +A  +   + R+  + D  T ++++E    
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510

Query: 630 KG 631
            G
Sbjct: 511 AG 512



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 233/513 (45%), Gaps = 26/513 (5%)

Query: 64  RRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERV 123
           R +V+  +    PL    CR    R A+S K   + R +LR+        +   + D+ +
Sbjct: 15  RSLVVRGNAATFPLSFSFCR----RRAFSGKTSYDYREVLRT-------GLSDIELDDAI 63

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
            L   +    Q R     I +  +L  ++K             M   GI      ++ L+
Sbjct: 64  GL---FGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             + R  +L  A+ +L  M K    P+++  N+ ++    GN+++ A+  +++M   G  
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+ +T+  LI G    ++  +A+ LID M  +GC PD V+Y  V+  LCK        +L
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240

Query: 304 MEKMVN---DSNLFHDQGRIE---------EAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           + KM     ++N+      I+         +A  L  +M   G  P+V+TY+++++  C 
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            G    A ++L  M      PN V+++A ++     GK ++A ++     +    PN  T
Sbjct: 301 YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFT 360

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           YS +++G     +L EA  ++  M++K   P  V  N LI   C+  ++D   +  +E  
Sbjct: 361 YSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMS 420

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            +G   N V +T+LI GF Q  D + A  +   M      P+ +TY  ++D L KNG++ 
Sbjct: 421 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 480

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           +A  +   +    + P + TY  +I   C+ G+
Sbjct: 481 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 182/360 (50%), Gaps = 3/360 (0%)

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +M ++G  PD+VT  +++NGFC    +  A  ++ QM   G KP+TV++T  ++GL  + 
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K+ EA  +I+   +    P+ +TY  V++GL + G    A +++ +M         V  +
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            +I SLC+    D A     E  NKG   NV+ ++SLI   C  G   +A  LL DM   
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
           K +P+ VT++ +IDA  K G++ +A +L  +M+ + + P + TY ++I+ +C + R+ + 
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377

Query: 569 LKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            ++LE M+ K        YN +I   C    +++  ++  ++ +     +  T   L+  
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           +        A  V  +M +  + P++     + + L   GK  +A  ++  +++R  ++P
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA-MVVFEYLQRSTMEP 496



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 119/265 (44%), Gaps = 3/265 (1%)

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           +L +A  +   M +   FP+ +E + L+ ++ +  K D    F ++    G + N+  + 
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            LI  FC+   L  AL+LL  M     +PD VT  ++++      R+ +A  L+ +M+  
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEA 601
           G  P  VT+ T+IH      +  + + L+++M+ +  Q     Y  V+  LC  G  + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
             +L K+     +A+      +++S         A  +   M N+ + P++     +   
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 662 LILEGKSEEADTLMLRFVERGHIQP 686
           L   G+  +A  L+   +ER  I P
Sbjct: 298 LCNYGRWSDASRLLSDMIER-KINP 321



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 4/141 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           AK++L LM R+  +C P   +Y  L+  + +A ++   M +   M +  +  N +   T 
Sbjct: 377 AKQMLELMIRK--DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           IH          A    ++M   G+ PN+LTYN L+ G C   ++  A+ + + +     
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494

Query: 278 SPDKVSYYTVMGYLCKEKRIK 298
            PD  +Y  ++  +CK  + K
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWK 515


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 212/415 (51%), Gaps = 17/415 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS L+    +AG+L  A+   + M +    PNL   N  +  L    K+ +A+     +Q
Sbjct: 6   FSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGIQ 65

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRI 297
               +P+V+T N LI G+C+L  +  A++L  EM       P+  +Y  ++   CK  R+
Sbjct: 66  ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRL 122

Query: 298 KEVRDLMEK----------MVNDSNLFHDQGRIEEAKELVNQM-SQMGCIPDVVTYTAVV 346
            + R L+E+          + + +  F    R++EA +L+  M  +    PD+V +  ++
Sbjct: 123 DQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVII 182

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN--TSEEEW 404
           +GFC+ G + +A +ML+ +   GC PN V+YT  ++G C +G   EA ++    +S +  
Sbjct: 183 HGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHH 242

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             PN +T++ ++ GL +  +L  A ++V++M  +           L+  LC++G+     
Sbjct: 243 AEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVS 302

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           +  +E L +GC  +VV +T+L+   C+ G L++A  ++  M      PD  TYT +++ L
Sbjct: 303 RVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGL 362

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
            +NG+V  ATE   K+L +   P  V Y  ++   C+   V++ +K   +ML ++
Sbjct: 363 FENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR 417



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 216/441 (48%), Gaps = 17/441 (3%)

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           PN  T++ LI G C   R+ +A++  ++M  + C P+      ++  LC+  ++ +   +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 304 MEKMVNDS---------NLFHDQGRIEEAKELVNQMSQ-MGCIPDVVTYTAVVNGFCRVG 353
              +             N F +   +++A EL ++M +    +P+  TYTA++  +C++ 
Sbjct: 61  FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI-NTSEEEWWTPNAITY 412
            LDQA+++L++     C  + ++ T+   G C   +  EA +++ +  E++   P+ + +
Sbjct: 121 RLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ--EC 470
           +V++HG  + G++ EA +++  +V  G  P  V    LI   C+ G +  A +  +    
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
            +     NVV F +LI G C+   LE A  L+  M       DT TYTT++D L K GR 
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRT 298

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQV 588
            E + +  +ML +G  P+VVTY T++H +C+ G ++D  +++  M++K      T Y  +
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           +E L   G +  A +   K+LR      A     LV       +   A K    M +R L
Sbjct: 359 LEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRL 418

Query: 649 IPDLKLCKKVSERLILEGKSE 669
            PD   CK + E L   G+++
Sbjct: 419 APDPATCKLLVEMLCKRGRTD 439



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 198/402 (49%), Gaps = 23/402 (5%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA- 240
           L+ +  +AGK+  AM +   +Q    +P+++  N  I+       L KAL     M+   
Sbjct: 44  LLASLCQAGKMDQAMAIFRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNF 100

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
            + P   TY  +IK YC + R+  A +L++E     CS D ++  +V    CK +R+ E 
Sbjct: 101 ALVPEATTYTAIIKCYCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEA 158

Query: 301 RDLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
             L+  MV   +              F   GR+ EA E++  +  MGC+P+ VTYT +++
Sbjct: 159 YQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218

Query: 348 GFCRVGELDQAK---KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           GFC+ G L +A    K+L    HH  +PN V++ A ++GLC   +   A E++   +   
Sbjct: 219 GFCKSGNLSEALQLFKVLSSRDHHA-EPNVVTFNALISGLCKADRLEHAFELVKQMKARD 277

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
              +  TY+ +M GL ++G+ SE   V  EM+++G  P+ V    L+ + C+ G +  A+
Sbjct: 278 LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQ 337

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           + ++  + KG   +V  +T L+ G  + G +  A    + +   +  P  V Y+ ++   
Sbjct: 338 QVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGC 397

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
            K   V+EA +  ++ML + L P   T + ++   C+ GR +
Sbjct: 398 CKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 118/278 (42%), Gaps = 38/278 (13%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN  T+SV++ GL + G+L EA +   +M+++   P   +INLL+ SLC+ GKMD A   
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +      C+ +V+    LI GFC+   L++AL L  +                   + K
Sbjct: 61  FR---GIQCSPSVITLNILINGFCELQLLDKALELFHE-------------------MEK 98

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN 586
           N                 LVP   TY  +I  YC++ R++   +LLE+         A  
Sbjct: 99  NF---------------ALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAIT 143

Query: 587 QVIENLCSFGYLEEAGKIL-GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
            V    C    ++EA ++L   V + ++K D    +V++  +   G    AY++   + +
Sbjct: 144 SVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVS 203

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
              +P+      + +     G   EA  L      R H
Sbjct: 204 MGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDH 241



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 4/161 (2%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           R D   Y  +++ L K        RV   M R G  C P   +Y  L+ A+ +AG L++A
Sbjct: 279 RADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREG--CNPSVVTYTTLVHAHCKAGSLQDA 336

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             V+  M    + P++      +  L    K+  A  F E++      P  + Y+ L++G
Sbjct: 337 QQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRG 396

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
            C    + +A+K   EM  +  +PD  +   ++  LCK  R
Sbjct: 397 CCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 5/179 (2%)

Query: 124 ALQFF-YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY- 181
           ALQ F   + R      + + +  ++  L K    + A  +++ M  R +  R + F+Y 
Sbjct: 229 ALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDL--RADTFTYT 286

Query: 182 -LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
            LM    + G+      V   M +    P+++   T +H       L  A + +  M   
Sbjct: 287 TLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAK 346

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
           GI P+V TY  L++G  +  +++ A +  +++  + C P  V Y  ++   CK   + E
Sbjct: 347 GIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDE 405


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 180/700 (25%), Positives = 321/700 (45%), Gaps = 87/700 (12%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLR---SQADERVALQFFYWADR 133
           +V E+ R++  R  W+       + L  S+    +  + R   S  D   AL FF    R
Sbjct: 22  IVAELGRVLSTRR-WNKG--SAYKRLSPSVTAAHVADLFRAPVSPLDPATALAFFECVAR 78

Query: 134 QWRYRHDPIVYYMMLEILSKTKL-------------CQG----------AKRVLRLMARR 170
           +  +RH    +  +L++L++ +              C G          A + +R +  +
Sbjct: 79  RPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGK 138

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
            +   P+ ++  + +  R         + S + +  + P+ +  NT I        LA A
Sbjct: 139 RLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIA 198

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
            R+   ++ +G+  +  T N L+ GYC    ++ A  L+  MPL GC  ++ SY  ++  
Sbjct: 199 HRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQG 258

Query: 291 LCKEKRIKEVRDLMEKMVNDS---NLFH---------DQGRIEEAKELVNQMSQMGCIPD 338
           LC+ + ++E   L+  MV+D    NL            +GRI +A+ L+++M   G +P 
Sbjct: 259 LCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPS 318

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V TY A+++G+C+ G +  A  +   M  +GC P+  +Y + + GLC  GK  EA E++N
Sbjct: 319 VWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLN 377

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
            +    +TP  IT++ +++G  +  ++ +A  V   M+            +LI  L ++ 
Sbjct: 378 GAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKC 437

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           ++  AK+ + E    G A NVV +TS+I G+C+ G +  AL +   M      P+  TY 
Sbjct: 438 RLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYG 497

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           ++I  L ++ ++ +A  L+ KM   G+ P V+TY T+I   C+    ++  +L E M  +
Sbjct: 498 SLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMM--E 555

Query: 579 QKCRT----AYNQVIENLCSFGYLEEA-------GKILGKVLRTA-----SKA-DASTCH 621
           Q   T    AYN + + LC  G  EEA       G +L KV  T+     SKA +     
Sbjct: 556 QNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAA 615

Query: 622 VLVESYLNKG--IPLLAYKV-------------ACRMFNRNLIPDLKLCKKVSERLIL-- 664
           VL+E  +N+G    L  Y V             A  + ++  +  +K C  V+  +I+  
Sbjct: 616 VLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVK-CNIVAYTIIISE 674

Query: 665 ---EGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVFLNS 701
              EGK + A +L    +  GH +P +  +     VF++S
Sbjct: 675 MIKEGKHDHAKSLFNEMISSGH-KPSATTY----TVFISS 709



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 248/542 (45%), Gaps = 55/542 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  M+    K      A R   L+   G++      + L++ Y R   LR A ++L
Sbjct: 178 DTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLL 237

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            MM       N       I  L     + +AL  +  M   G + N+ TY  LIKG C  
Sbjct: 238 MMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKE 297

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEKM-VNDSNLFH 315
            RI DA  L+DEMPL+G  P   +Y  ++   CK  R+K+   ++ LME+   N  +  +
Sbjct: 298 GRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTY 357

Query: 316 DQ-------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD------------ 356
           +        G+++EA+EL+N     G  P V+T+T ++NG+C+   +D            
Sbjct: 358 NSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISS 417

Query: 357 -----------------------QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
                                  +AK+ L +M+ +G  PN V+YT+ ++G C  G    A
Sbjct: 418 NCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAA 477

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            E+    E E   PNA TY  +++GL ++ KL +A  ++ +M + G  P  +    LIQ 
Sbjct: 478 LEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQG 537

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL--DDMYLCKKD 511
            C++ + D A +  +     G   +   +  L    C+ G  EEA S L    + L K  
Sbjct: 538 QCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTK-- 595

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
              VTYT+++D  SK G  + A  L+ KM+++G    + TY  ++   C+  ++ + L +
Sbjct: 596 ---VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSI 652

Query: 572 LEKM-LSKQKCR-TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
           L++M +S  KC   AY  +I  +   G  + A  +  +++ +  K  A+T  V + SY  
Sbjct: 653 LDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCK 712

Query: 630 KG 631
            G
Sbjct: 713 IG 714



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 225/510 (44%), Gaps = 44/510 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++ +L K    + AK  L  M   G+      ++ ++  Y + G +  A+ V 
Sbjct: 422 DLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVF 481

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M+     PN     + I+ L+   KL KA+  + +MQ  GITP V+TY  LI+G C  
Sbjct: 482 KLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKK 541

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           H   +A +L + M   G +PD+ +Y  +   LCK                        GR
Sbjct: 542 HEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCK-----------------------SGR 578

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            EEA      + + G +   VTYT++V+GF + G  D A  ++++M + GCK +  +Y+ 
Sbjct: 579 AEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSV 635

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L  LC   K  EA  +++         N + Y++++  + +EGK   A  +  EM+  G
Sbjct: 636 LLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSG 695

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P+     + I S C+ G+++ A+  + E    G   +VV +   I G    G ++ A 
Sbjct: 696 HKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAF 755

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE----------------ATELMMKMLSK 543
           S L  M     +P+  TY  ++    K   +                    +L+ +M+  
Sbjct: 756 STLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKH 815

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEA 601
           GL PTVVTY ++I  +C+  R+E+   LL+ ML K        Y  +I+  C      +A
Sbjct: 816 GLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKA 875

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKG 631
              +  ++    +    + H L+    ++G
Sbjct: 876 VSFVTDMIEFGFQPQLESYHYLIVGLCDEG 905



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 92/402 (22%), Positives = 166/402 (41%), Gaps = 45/402 (11%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++  SK      A  ++  M   G +     +S L+ A  +  KL  A+ +L  
Sbjct: 596 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQ 655

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M  + V  N++     I  ++   K   A      M  +G  P+  TY   I  YC + R
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGR 715

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           I++A  LI EM   G +PD V+Y   +                       N     G I+
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYNIFI-----------------------NGCGHMGYID 752

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG----------------ELDQAKKMLQQM 365
            A   + +M    C P+  TY  ++  F ++                 EL+   ++L++M
Sbjct: 753 RAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERM 812

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
             HG  P  V+Y++ + G C   +  EA  +++    +  +PN   Y++++         
Sbjct: 813 MKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLF 872

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A   V +M++ GF P     + LI  LC EG  D AK    + L      N V +  L
Sbjct: 873 GKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKIL 932

Query: 486 IRGFCQKGDLE---EALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             G  + G ++   + L+ +D+ + C+ D +  +Y+ + D++
Sbjct: 933 NDGLLKAGHVDFCSQLLAAMDNRH-CRIDSE--SYSMLTDSI 971



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/348 (21%), Positives = 148/348 (42%), Gaps = 7/348 (2%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D   Y ++L+ L K K    A  +L  M   G++C   A++ ++    + GK  +A  
Sbjct: 627 KADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKS 686

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           + + M  +   P+       I       ++ +A   +  M+  G+TP+V+TYN  I G  
Sbjct: 687 LFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCG 746

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
            +  I  A   +  M    C P+  +Y+ ++ +  K         L+     D++   + 
Sbjct: 747 HMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLK-------MSLINAHYVDTSGMWNW 799

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
             +    +L+ +M + G  P VVTY++++ GFC+   L++A  +L  M      PN   Y
Sbjct: 800 IELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIY 859

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T  +   C      +A   +    E  + P   +Y  ++ GL  EG    A  +  +++ 
Sbjct: 860 TMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLG 919

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             +    V   +L   L + G +D   + +    N+ C ++  +++ L
Sbjct: 920 MDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/307 (19%), Positives = 127/307 (41%), Gaps = 28/307 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y +++  + K      AK +   M   G +     ++  + +Y + G++  A +++  
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGE 725

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M++  V P+++  N  I+       + +A   L+RM  A   PN  TY  L+K +  +  
Sbjct: 726 MERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSL 785

Query: 262 IKD----------------AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           I                    +L++ M   G +P  V+Y +++   CK  R++E   L++
Sbjct: 786 INAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLD 845

Query: 306 KMVN-----DSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
            M+      +  ++        D     +A   V  M + G  P + +Y  ++ G C  G
Sbjct: 846 HMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEG 905

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           + D+AK +   +       N V++    +GL   G      +++   +      ++ +YS
Sbjct: 906 DYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYS 965

Query: 414 VVMHGLR 420
           ++   +R
Sbjct: 966 MLTDSIR 972


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 227/515 (44%), Gaps = 25/515 (4%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI       + L+ ++    +L  A  VL+ + K    P+    NT I  L V  K
Sbjct: 176 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 235

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +AL   ++    G  P+V+TY  L+ G C +     AI+L+  M  K C P+ ++Y T
Sbjct: 236 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 295

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LCK++++                        EA  L ++M   G  PD+ TY +++
Sbjct: 296 IIDSLCKDRQVT-----------------------EAFNLFSEMITKGISPDIFTYNSLI 332

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C + E      +L +M +    PN V ++  ++ LC  G    A ++++   +    
Sbjct: 333 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 392

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ +TY+ +M G     ++ EA  V   MV KG  P     N+LI   C+  +MD A   
Sbjct: 393 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 452

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           +++   +G   + V + +LI G C  G L+ A++L  +M    + PD VTY  ++D L K
Sbjct: 453 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 512

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTA 584
           N  + EA  L+  +    L   ++ Y   I   C+ G +E    L   + SK  Q     
Sbjct: 513 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRT 572

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN +I  LC  G L+EA K+  K+       D    + ++  +L       A ++   M 
Sbjct: 573 YNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEML 632

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
                 D+     + E L  +G  +  + L LR V
Sbjct: 633 AEGFSADVSTTTLIVEMLSDDGLDQSFERLRLRGV 667



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 218/457 (47%), Gaps = 25/457 (5%)

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           +  L    +M   GI P+V T N LI  +C L R+  A  ++ ++   GC PD  ++ T+
Sbjct: 167 STVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTL 226

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +  LC E +I E   L +K + +                       G  PDVVTY  ++N
Sbjct: 227 IRGLCVEGKIGEALHLFDKTIGE-----------------------GFQPDVVTYGTLMN 263

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G C+VG    A ++L+ M    C+PN ++Y   ++ LC + +  EA  + +    +  +P
Sbjct: 264 GLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISP 323

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           +  TY+ ++H L    +      ++ EMV     P  V  + ++ +LC+EG +  A   +
Sbjct: 324 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 383

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
              + +G   +VV +T+L+ G C + +++EA+ + D M      P+  +Y  +I+   + 
Sbjct: 384 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 443

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAY 585
            R+++A  L+ +M  +GL+   VTY T+IH  C VGR++  + L  +M++  +      Y
Sbjct: 444 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 503

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
             +++ LC   +L EA  +L  +  +   AD    ++ ++     G    A  +   + +
Sbjct: 504 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 563

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           + L PD++    +   L   G  +EA+ L  +  E G
Sbjct: 564 KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENG 600



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 186/406 (45%), Gaps = 16/406 (3%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           ++ D + Y  ++  L K      A R+LR M ++   CRP   +Y  ++ +  +  ++  
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK--NCRPNVIAYNTIIDSLCKDRQVTE 308

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  + S M    ++P++   N+ IH L    +       L  M  + I PNV+ ++ ++ 
Sbjct: 309 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 368

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
             C    I  A  ++D M  +G  PD V+Y  +M   C    + E   + + MV+     
Sbjct: 369 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 428

Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                    N +    R+++A  L+ QMS  G I D VTY  +++G C VG L  A  + 
Sbjct: 429 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 488

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            +M   G  P+ V+Y   L+ LC N    EA  ++   E      + + Y++ + G+ R 
Sbjct: 489 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 548

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G+L  A D+   +  KG  P     N++I  LC+ G +D A K  ++    GC+ +   +
Sbjct: 549 GELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIY 608

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
            ++IRGF +  +   A  LL +M       D  T T I++ LS +G
Sbjct: 609 NTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG 654



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 144/301 (47%), Gaps = 2/301 (0%)

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           LD A     +M H    P+TV +T  L  +           +    +     P+  T ++
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           +++      +L  A  V+ +++K G  P     N LI+ LC EGK+  A     + + +G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              +VV + +L+ G C+ G+   A+ LL  M      P+ + Y TIID+L K+ +V EA 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENL 592
            L  +M++KG+ P + TY ++IH  C +   + +  LL +M++ +       ++ V++ L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G +  A  ++  +++   + D  T   L++ +  +     A KV   M ++  +P++
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 653 K 653
           +
Sbjct: 431 R 431


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 223/472 (47%), Gaps = 22/472 (4%)

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG----NKLAKALR 232
             ++ L+ AY  AG L  A   LS + +A +AP+    + A    V+G       A A R
Sbjct: 75  HTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPD----SHAYTSFVLGYCRTGLFAHACR 130

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
               M   G      TY  L++G C    +++A+ +   M   GC+PD   Y  ++  LC
Sbjct: 131 LFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLC 190

Query: 293 KEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVV 340
              R  E   L+   +    +            +   G +E A ++   M   GC+P+V 
Sbjct: 191 GAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVR 250

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TYT ++ GFC+ G++++A  +  +M   G  PN V+YT  + G C  G    A  ++++ 
Sbjct: 251 TYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSM 310

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           E     PN  T  V++  L + G++ EA   +  +V+KG     V    +I +LC+ GK 
Sbjct: 311 EACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKF 370

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           DGA   MQ+ + +G   +   ++SLI G C++  L EA+SLL+DM       + V +T +
Sbjct: 371 DGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTIL 430

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-- 578
           ID   +  R +    +  +M + G+ P VVTY   I  YCQ GR+ED   ++ +M+    
Sbjct: 431 IDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGV 490

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           +   T YN +I+   + G + +A   L  ++    K +  +  VL+   L K
Sbjct: 491 RPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKK 542



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 243/555 (43%), Gaps = 34/555 (6%)

Query: 153 KTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
           +T L   A R+  LM +RG    P  ++ L+     AG +R AM V + M     AP+  
Sbjct: 121 RTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSH 180

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
           + +  +H L    +  +A+  L      G  PNV  YN LI GYC    ++ AI +   M
Sbjct: 181 VYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGM 240

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHDQ---GRI 320
             KGC P+  +Y  ++   CK  +++    L  +M         V  + L   Q   G +
Sbjct: 241 QSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHL 300

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           E A  L++ M   G  P+  T   +++  C+ G +++A++ L  +   G K N V YT+ 
Sbjct: 301 EHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSM 360

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++ LC +GK   A  ++     E + P+A  YS ++ GL RE KL EA  ++ +M++ G 
Sbjct: 361 IDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGV 420

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
               V   +LI    RE + D  K         G   +VV +T  IR +CQ G +E+A S
Sbjct: 421 QANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAES 480

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           ++  M      P+  TY T+I   +  G V +A   +  M+  G  P   +Y  ++    
Sbjct: 481 MMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLL 540

Query: 561 QVGRVEDL------------LKLLEKMLS---KQKCRTA---YNQVIENLCSFGYLEEAG 602
           +     DL            +K+LE++L    K +C +A   Y+  I  L     LEEA 
Sbjct: 541 KKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAK 600

Query: 603 KIL--GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
             L   +        D  TC  ++E      +   A +    M  RN +P L+  + +  
Sbjct: 601 SFLVGMQSANLTPSEDVYTC--MIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIIC 658

Query: 661 RLILEGKSEEADTLM 675
            L  EG    A ++ 
Sbjct: 659 ALCEEGSFHTAKSIF 673



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 174/371 (46%), Gaps = 12/371 (3%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            G + + + L  +M     + ++ TYT ++N +C  G+L  AK+ L  +   G  P++ +
Sbjct: 56  HGMLSDMESLAARMP----VRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHA 111

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YT+F+ G C  G    A  +     +        TY+ ++ GL   G + EA  V   M 
Sbjct: 112 YTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMW 171

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
             G  P     ++++  LC  G+   A   + + + KG   NV  + +LI G+C  GDLE
Sbjct: 172 PDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLE 231

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            A+ +   M      P+  TYT +I    K+G+VE A  L  +M+  GL P VVTY T+I
Sbjct: 232 LAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLI 291

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQ-----VIENLCSFGYLEEAGKILGKVLRT 611
              C  G +E   +LL  M   + C  A N+     +I+ LC  G +EEA + LG +++ 
Sbjct: 292 QGQCSEGHLEHAFRLLHSM---EACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQK 348

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
             K +      ++++    G    A+ +  ++     +PD  +   + + L  E K  EA
Sbjct: 349 GIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEA 408

Query: 672 DTLMLRFVERG 682
            +L+   +E G
Sbjct: 409 ISLLNDMIESG 419



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/551 (22%), Positives = 238/551 (43%), Gaps = 45/551 (8%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
           VY  +++    T   + A  + + M  +G  C P   +Y  L+  + ++GK+  AM + S
Sbjct: 216 VYNALIDGYCSTGDLELAIDIFKGMQSKG--CLPNVRTYTQLICGFCKSGKVERAMVLYS 273

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M +A +APN++   T I        L  A R L  M+  G+ PN  T   LI   C   
Sbjct: 274 RMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHG 333

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
           RI++A + +  +  KG   ++V Y +++  LCK  +     +LM+K++ +          
Sbjct: 334 RIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITE---------- 383

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
                        G +PD   Y+++++G CR  +L +A  +L  M   G + N V +T  
Sbjct: 384 -------------GFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTIL 430

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++      +S   + + +        P+ +TY+V +    ++G++ +A  ++ +M+  G 
Sbjct: 431 IDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGV 490

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P     N LI+     G +  A   ++  ++ GC  N  ++T L+    +K    + ++
Sbjct: 491 RPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVA 550

Query: 501 ----------------LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
                           LL+++   +    +  Y   I  LSK  R+EEA   ++ M S  
Sbjct: 551 DSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSAN 610

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAG 602
           L P+   Y  +I    ++  +++ L+ L+ M+ +       +Y  +I  LC  G    A 
Sbjct: 611 LTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAK 670

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
            I G +L      D     +L++  L KG      ++   M  +N  P   +  +++  +
Sbjct: 671 SIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEI 730

Query: 663 ILEGKSEEADT 673
            +  +++E  T
Sbjct: 731 TVTSEAQEIAT 741


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 170/659 (25%), Positives = 284/659 (43%), Gaps = 66/659 (10%)

Query: 78  VREVCRLIELRS--AWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQW 135
           VR++ +++E  S   +S K  G+L         R +  +L    +   A+ FF WA  + 
Sbjct: 32  VRQLLQIVESSSRLGFSMKWNGQLSQ-------RLVGVILHMVKNGESAMVFFGWAGTRQ 84

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLR 193
            +RH    Y    E L +T  C+ A R+ +   +   E  P++ +Y  L+      GKL+
Sbjct: 85  DFRHTVHTYNCFYEALIRTGQCEEAYRLFK--EKWPQELIPDSITYGILIRGLCNFGKLK 142

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ-----------LAGI 242
            A  +   M    + P +L C   ++ L     L  ALR+ E+M            + G+
Sbjct: 143 LACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGL 202

Query: 243 --------------------TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
                                PN  TY  +I G     ++ +A +++ EMP+    P   
Sbjct: 203 FRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPV----PTLA 258

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHDQGRIEE---AKELVNQM 330
           +Y +V+G  CK   + +   L+E M         +  + L H   R++E   A EL+ +M
Sbjct: 259 NYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEM 318

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH-GCKPNTVSYTAFLNGLCHNGK 389
                +PD+ TY  ++ G CR   L +A+ +L  + +   C PN VSY   ++G     +
Sbjct: 319 KSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAAR 378

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A ++          P+ +TYS ++ GL   G+ SEA   + EMV K   P     + 
Sbjct: 379 VNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSS 438

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           +I  LCR G++D A       +  GC  N+  + SLI G C+ G L +A   + +M    
Sbjct: 439 VISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERG 498

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             PD VTY T+I  L +  R +EA +L ++ L +G+  +  +   VI     +  +E   
Sbjct: 499 CSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVI---ASLRCLEQAQ 555

Query: 570 KLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           ++L  +L+     TA  Y  VIE+LC    L EA ++L  ++    K D ST   LV + 
Sbjct: 556 RVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAM 615

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
             +   ++A      M      P +     +   L   GK  EA  ++ R +      P
Sbjct: 616 CRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFP 674



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 146/589 (24%), Positives = 257/589 (43%), Gaps = 90/589 (15%)

Query: 176 PEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P  ++Y +V     +AGK+  A  VL  M      P L    + I        + KA   
Sbjct: 224 PNNWTYTVVINGLVKAGKVAEAERVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHL 279

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           LE M+  G   + LTYN LI G+C L  I  A +L++EM      PD  +Y  ++  LC+
Sbjct: 280 LEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCR 339

Query: 294 EKRIKEVRDLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQMGCIPDVV 340
            KR+ E RDL+  + N+ +              F    R+ +A +L  +M   G  PDVV
Sbjct: 340 AKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVV 399

Query: 341 TYT-----------------------------------AVVNGFCRVGELDQAKKMLQQM 365
           TY+                                   +V++G CR GELD A  +   M
Sbjct: 400 TYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSM 459

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
             +GC+PN   Y + + GLC  G+  +A+  +    E   +P+ +TY  ++ GL R  + 
Sbjct: 460 VANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRT 519

Query: 426 SEACD--------------------------------VVREMVKKGFFPTPVEINLLIQS 453
            EACD                                V+R ++  G  PT      +I+S
Sbjct: 520 DEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIES 579

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           LC+E  +  A++ +++ +  G   +     +L+   C++     A++ L++M      P 
Sbjct: 580 LCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPS 639

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLS-KGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
             TY+T+++AL K G+  EA  ++ +++S     P  + Y  +I  Y    +VE+   +L
Sbjct: 640 VGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVL 699

Query: 573 EKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           +++ SK   ++  AYN +++ L     L+   ++L ++ R     + +T ++L++ +   
Sbjct: 700 QELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRL 759

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
           G    A +V   M  + L P   + K + + L    + +E+  L+ R V
Sbjct: 760 GQTDRAVRVLSEM-KKVLTPSAAIIKFLVDELARAEREQESKDLVKRPV 807


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 146/608 (24%), Positives = 267/608 (43%), Gaps = 53/608 (8%)

Query: 102 LLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVY----------------- 144
           LL SL P +   V         AL+F  +  R+  +++ P  +                 
Sbjct: 98  LLASLTPEKAAFVAARCLVPVRALEFLLFLSREHSHKYGPDTFAKVAMRLLESRDRPAAV 157

Query: 145 -----YMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
                +M+    +K ++ Q A   L + ++RG +     ++ L++  ++       M   
Sbjct: 158 GRARIHMIKSCSNKAEMTQ-ALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRY 216

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + +  + PNLLI N+ I+ L     +  A   + ++  +G+ P+  TY  +I GYC  
Sbjct: 217 HQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRN 276

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             +  A ++ + M  +GC P+  +Y T++  LC                       + GR
Sbjct: 277 RDLDSAFEIFNRMDEEGCEPNAATYSTLINGLC-----------------------NSGR 313

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           + EA + +++M++ G +P V T+TA +   C +G ++ A K+   M   GCKPN  +YT+
Sbjct: 314 VNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTS 373

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G      S  A  + +    +   PN +TY+ +M+ L    ++  A  V   M K G
Sbjct: 374 LISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHG 430

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     N LI+  C  G  + A   +   L       +V +  +I+G+C  GD + A+
Sbjct: 431 CLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAI 490

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +L+ M      PD  +YT +I    K  ++E A+ +  +M+ +GL P  VTY  +I  Y
Sbjct: 491 RVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGY 550

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           C+  +++   ++LE+M  +  CR     YN +I  L        A ++   +L      D
Sbjct: 551 CKDEKLDCAARMLERM-KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPD 609

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
             T   ++    N G   LA ++  +M     +P+L     + + L  EG+ EEA+ +  
Sbjct: 610 VVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFS 669

Query: 677 RFVERGHI 684
              ++G I
Sbjct: 670 ELKKQGLI 677



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 233/502 (46%), Gaps = 56/502 (11%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           ++Y  ++  L K    + A+ ++  + + G+  +P+ F+Y  +++ Y R   L +A  + 
Sbjct: 229 LIYNSVINALCKDGNVRDAESIINKVFKSGM--KPDTFTYTSMILGYCRNRDLDSAFEIF 286

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M +    PN    +T I+ L    ++ +AL F+  M   G+ P V T+   I   CD+
Sbjct: 287 NRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDM 346

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            RI+DA K+  +M  KGC P+    YT    +  ++  +    L  +M  D         
Sbjct: 347 GRIEDAWKIFIDMKKKGCKPN---VYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTY 403

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPD----------------------------- 338
               N+  +   I+ A  + N M + GC+P+                             
Sbjct: 404 NALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLK 463

Query: 339 ------VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
                 +VTY  ++ G+C  G+ D A ++L+ M  +GC+P+  SYT  ++G C   K   
Sbjct: 464 GRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMEL 523

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A  M N   +    PN +TY+ ++ G  ++ KL  A  ++  M + G  P     N+LI 
Sbjct: 524 ASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIH 583

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            L ++    GA++  +  L +  + +VV ++++I G C  G +  AL + + M      P
Sbjct: 584 GLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLP 643

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           +  TY+++I AL + GRVEEA E+  ++  +GL+P  VTY  +I      G+V+     L
Sbjct: 644 NLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFL 703

Query: 573 EKMLSK--QKCRTAYNQVIENL 592
            +M++   Q     Y+ +I+ L
Sbjct: 704 GEMINAGCQPTLQTYDVLIKGL 725



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 150/560 (26%), Positives = 240/560 (42%), Gaps = 89/560 (15%)

Query: 145 YMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQK 204
           Y    ++S  ++ + A  +   M+R G+      ++ LM       ++ +A+ V +MM K
Sbjct: 369 YTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGK 428

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
               PN    N  I          KA+  L  M     TP ++TYN +IKGYCD      
Sbjct: 429 HGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDV 488

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAK 324
           AI++++ M   GC PD+ SY  ++   CK                         ++E A 
Sbjct: 489 AIRVLELMKANGCQPDEWSYTELISGFCK-----------------------ISKMELAS 525

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT---------- 374
            + N+M   G  P+ VTYTA+++G+C+  +LD A +ML++M   GC+PN           
Sbjct: 526 GMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGL 585

Query: 375 -------------------------VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
                                    V+Y+  +NGLC+NG    A EM N   +    PN 
Sbjct: 586 TKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNL 645

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            TYS ++  L +EG++ EA ++  E+ K+G  P  V    +I+     GK+D A  F+ E
Sbjct: 646 HTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGE 705

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD-------DMYLCKKDPDTVT------ 516
            +N GC   +  +  LI+G   +    + ++L +       D  +  KD  +V       
Sbjct: 706 MINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAE 765

Query: 517 ---------YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
                    Y  ++  LS++GR  EA  L   M+S+   P   TY+  +    +  +V D
Sbjct: 766 LDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKV-D 824

Query: 568 LLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           L   + K +S Q+C    T Y ++I  LC     +EA  +  K+L  A  AD     +L+
Sbjct: 825 LAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILI 884

Query: 625 ESYLNKGIPLLAYKVACRMF 644
              L  G     YK  C  F
Sbjct: 885 NGLLGAG-----YKDLCMEF 899



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 190/435 (43%), Gaps = 39/435 (8%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A RVL LM   G  C+P+ +SY  L+  + +  K+  A  + + M    + PN +     
Sbjct: 489 AIRVLELMKANG--CQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTAL 546

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I       KL  A R LERM+ +G  PNV TYN LI G    +    A +L   M  +  
Sbjct: 547 ISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKI 606

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKE 325
           SPD V+Y TV+  LC    I    ++  KMV    L               +GR+EEA+E
Sbjct: 607 SPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEE 666

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL- 384
           + +++ + G IPD VTY  ++      G++D+A   L +M + GC+P   +Y   + GL 
Sbjct: 667 MFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQ 726

Query: 385 ----CHNGKSLEAREMINTSEEEWWTPNAIT-----------------YSVVMHGLRREG 423
                H   +L      +T +++    + I+                 Y  ++  L R G
Sbjct: 727 NEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSG 786

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           +  EA ++ R MV +   P        + SL R  K+D A    +   ++ C +++  + 
Sbjct: 787 RWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYK 846

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            LI   CQ    +EA  + + M     + D + +T +I+ L   G  +   E +  M + 
Sbjct: 847 ELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETN 906

Query: 544 GLVPTVVTYRTVIHR 558
              P+    RT++ R
Sbjct: 907 RRNPSSHA-RTILAR 920



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/310 (19%), Positives = 120/310 (38%), Gaps = 34/310 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++  L        A  +   M + G       +S L+ A  + G++  A  + 
Sbjct: 609 DVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMF 668

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD- 258
           S ++K  + P+ +     I V V+  K+ +A  FL  M  AG  P + TY+ LIKG  + 
Sbjct: 669 SELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNE 728

Query: 259 --LHRI------------------KDAIKLID-EMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              H++                  KD I ++  ++        +  Y  ++  L +  R 
Sbjct: 729 MVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRW 788

Query: 298 KEVRDLMEKMVNDSNLFHDQG------------RIEEAKELVNQMSQMGCIPDVVTYTAV 345
            E  +L   MV+ S   +               +++ A ++   MS   C   +  Y  +
Sbjct: 789 FEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKEL 848

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           +   C++    +A+ + ++M       + + +T  +NGL   G      E ++  E    
Sbjct: 849 ICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRR 908

Query: 406 TPNAITYSVV 415
            P++   +++
Sbjct: 909 NPSSHARTIL 918


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 229/481 (47%), Gaps = 27/481 (5%)

Query: 173 ECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           E  P+ F+  ++   +   G++  A   +S + K    PN +  NT +  L +  K+ +A
Sbjct: 88  EVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEA 147

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           LRF +++   G   + ++Y  LI G C +   + AI+L+  +      P+ V Y  ++  
Sbjct: 148 LRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDR 207

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LCK+  + E  DL  +MV                         G  PDVVTY+ +V+GFC
Sbjct: 208 LCKDTLVDEAYDLYTEMVGK-----------------------GISPDVVTYSILVSGFC 244

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
            VG+L++A  +L +M      P+  +YT  ++ LC  GK  EA  ++    +     + +
Sbjct: 245 IVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVV 304

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            YS +M G     +++ A  V   M + G  P     +++I  LC+  ++D A    +E 
Sbjct: 305 VYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEI 364

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
             K    + V +TSLI   C+ G +     L D+M    + PD +TY  +IDAL KNG +
Sbjct: 365 HQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHL 424

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQV 588
           + A  L  KM  + + P V T+  ++   C+VGR+++ L+  + +L+K  C     Y  +
Sbjct: 425 DRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVM 484

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I  LC  G L+EA  +  ++      +DA T  +++ ++ +K     A K+   M  R L
Sbjct: 485 INGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544

Query: 649 I 649
           +
Sbjct: 545 L 545



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 203/413 (49%), Gaps = 29/413 (7%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA--YSRAGKLRN 194
           +R   I Y +++  + K    + A R+LR + R  I  RP    Y M+     +   +  
Sbjct: 159 FRLSGISYGILINGVCKIGETRAAIRLLRRIERWSI--RPNVVIYSMIIDRLCKDTLVDE 216

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  + + M    ++P+++  +  +    +  +L +A+  L  M L  I P++ TY  L+ 
Sbjct: 217 AYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVD 276

Query: 255 GYCDLHRIKDAIKLIDEMPLKGC-SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
             C   ++K+A  ++  M +K C + D V Y T+M   C              +VN+ N 
Sbjct: 277 ALCKEGKVKEAENVLAVM-VKACVNLDVVVYSTLMDGYC--------------LVNEVN- 320

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                    AK +   M+QMG  PDV  Y+ ++NG C++  +D+A  + ++++     P+
Sbjct: 321 --------NAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPD 372

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
           TV+YT+ ++ LC +G+     ++ +   +    P+ ITY+ ++  L + G L  A  +  
Sbjct: 373 TVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFN 432

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           +M  +   P      +L+  LC+ G++  A +F Q+ L KG  +NV  +T +I G C++G
Sbjct: 433 KMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEG 492

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            L+EAL+L   M       D VT+  +I A       ++A +L+ +M+++GL+
Sbjct: 493 LLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/490 (23%), Positives = 225/490 (45%), Gaps = 51/490 (10%)

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
           TP+   +N ++    ++ R   AI L  +M L    PD  +   ++   C   ++     
Sbjct: 55  TPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFS 114

Query: 303 LMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            + K+         +  + L      +G+++EA    +++   G     ++Y  ++NG C
Sbjct: 115 GVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVC 174

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           ++GE   A ++L+++     +PN V Y+  ++ LC +    EA ++      +  +P+ +
Sbjct: 175 KIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVV 234

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM--- 467
           TYS+++ G    G+L+ A D++ EMV +   P      +L+ +LC+EGK+  A+  +   
Sbjct: 235 TYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVM 294

Query: 468 -QECLNKG-----------CAVNVVN--------------------FTSLIRGFCQKGDL 495
            + C+N             C VN VN                    ++ +I G C+   +
Sbjct: 295 VKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRV 354

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           +EAL+L ++++     PDTVTYT++ID L K+GR+    +L  +ML +G  P V+TY  +
Sbjct: 355 DEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNL 414

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           I   C+ G ++  + L  KM   Q  R     +  +++ LC  G L+ A +    +L   
Sbjct: 415 IDALCKNGHLDRAIALFNKM-KDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKG 473

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
              +  T  V++     +G+   A  +  RM +   I D    + +      + ++++A+
Sbjct: 474 YCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAE 533

Query: 673 TLMLRFVERG 682
            L+   + RG
Sbjct: 534 KLVREMIARG 543



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 181/387 (46%), Gaps = 24/387 (6%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            + R A++     +R W  R + ++Y M+++ L K  L   A  +   M  +GI      
Sbjct: 177 GETRAAIRLLRRIER-WSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           +S L+  +   G+L  A+ +L+ M    + P++      +  L    K+ +A   L  M 
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
            A +  +V+ Y+ L+ GYC ++ + +A ++   M   G +PD   Y  ++  LCK KR+ 
Sbjct: 296 KACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVD 355

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
           E  +L E                       ++ Q   +PD VTYT++++  C+ G +   
Sbjct: 356 EALNLFE-----------------------EIHQKNMVPDTVTYTSLIDCLCKSGRISYV 392

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +  +M   G  P+ ++Y   ++ LC NG    A  + N  +++   PN  T+++++ G
Sbjct: 393 WDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDG 452

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L + G+L  A +  ++++ KG+        ++I  LC+EG +D A        + GC  +
Sbjct: 453 LCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISD 512

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDM 505
            V F  +IR F  K + ++A  L+ +M
Sbjct: 513 AVTFEIMIRAFFDKDENDKAEKLVREM 539



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 183/405 (45%), Gaps = 9/405 (2%)

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQ 332
           PL   + D VS +  M ++           ++  +VN         R   A  L  QM  
Sbjct: 34  PLTHNADDAVSQFNHMFHVHPTPHTFHFNKILISLVN-------VKRYPTAISLYKQMEL 86

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
               PD  T   ++N FC  G++  A   + ++   G +PNT++    + GLC  GK  E
Sbjct: 87  SEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKE 146

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A    +    + +  + I+Y ++++G+ + G+   A  ++R + +    P  V  +++I 
Sbjct: 147 ALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIID 206

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC++  +D A     E + KG + +VV ++ L+ GFC  G L  A+ LL++M L   +P
Sbjct: 207 RLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINP 266

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D  TYT ++DAL K G+V+EA  ++  M+   +   VV Y T++  YC V  V +  ++ 
Sbjct: 267 DIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVF 326

Query: 573 EKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
             M  +        Y+ +I  LC    ++EA  +  ++ +     D  T   L++     
Sbjct: 327 YTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKS 386

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           G     + +   M +R   PD+     + + L   G  + A  L 
Sbjct: 387 GRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALF 431


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 138/544 (25%), Positives = 247/544 (45%), Gaps = 75/544 (13%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+L  M    ++     ++ ++  Y + G++  A  +L  M    V P+    N+ + 
Sbjct: 368 AARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVD 427

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + KA      M   G     LTYN L+KG+C L  I DA++L   M  KG +P
Sbjct: 428 GYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAP 487

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEK-----MVNDSNLFHD--QG-----RIEEAKELV 327
           +++S  T++    K  + ++  +L ++     +  ++  F+    G     R+ EA+ELV
Sbjct: 488 NEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELV 547

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ----------------------- 364
           ++M Q  C PD++TY  + +G+C++G++D+A ++L +                       
Sbjct: 548 DKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIA 607

Query: 365 ------------MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
                       M + G  PNTV+Y A + G C  G    A  +     E+   PN    
Sbjct: 608 KQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFIC 667

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFP--------------------------TPVE 446
           S ++    R+GK  EA  V++ +V     P                            + 
Sbjct: 668 SSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIM 727

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            N++I  LC+ G+++ AK  + +  +KG   +   ++SLI G    G ++ A  L D M 
Sbjct: 728 WNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTML 787

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                P+ VTY ++I  L K+G +  A  L  K+ +KG+ P  +TY T+I ++C+ G + 
Sbjct: 788 SVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYIT 847

Query: 567 DLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           +  KL ++M+ +    T   Y+ +I  LC+ GY+EEA K+L +++      +  T   L+
Sbjct: 848 EAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLI 907

Query: 625 ESYL 628
           + Y+
Sbjct: 908 QGYV 911



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/554 (24%), Positives = 257/554 (46%), Gaps = 24/554 (4%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           ++L  L+      GA +V   M   G      + + ++   ++ G L   + V   MQ+A
Sbjct: 178 LLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRA 237

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
              P+                +  AL F+E M   G+  N++ Y+ ++ GYC++ +  DA
Sbjct: 238 GALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDA 297

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
            +++D +P +G SP+ V+Y  ++   C EK ++E   ++++             I + K+
Sbjct: 298 RRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQE-------------IRKNKQ 344

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           LV          D   + AV+NG+C++G ++ A ++L +M     + N   Y   +NG C
Sbjct: 345 LV---------VDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYC 395

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G+ +EA  +++        P+  +Y+ ++ G  ++G +++A +    M++ GF  T +
Sbjct: 396 KLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTL 455

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N L++  C  G +D A +     L KG A N ++ ++L+ GF + G  E+AL+L  + 
Sbjct: 456 TYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKET 515

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                  +T T+ T+I+ L K  R+ EA EL+ KM      P ++TYRT+   YC++G +
Sbjct: 516 LARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDM 575

Query: 566 EDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           +   ++L ++  L        +N +I          +   IL ++       +      L
Sbjct: 576 DRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGAL 635

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +  +  +G    AY +   M  + L+P+L +C  +      +GK +EA+ ++   V    
Sbjct: 636 IAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDM 695

Query: 684 IQPKSEEHLQRQRV 697
           I   S   L+  +V
Sbjct: 696 IPDISAPRLEIGKV 709



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 217/480 (45%), Gaps = 44/480 (9%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D   Y  +++   K  L   A      M R G       ++ L+  +   G + +A+ 
Sbjct: 416 RPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALR 475

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +  +M K  +APN + C+T +       K  KAL   +     G+  N  T+N +I G C
Sbjct: 476 LWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLC 535

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK-------EKRIKEVRDL------- 303
            + R+ +A +L+D+M    C PD ++Y T+    CK        + + E+ +L       
Sbjct: 536 KIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIE 595

Query: 304 -MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
               ++    +    G++    +++ +MS  G  P+ V Y A++ G+C+ G+L  A  + 
Sbjct: 596 FFNSLITGHFIAKQHGKV---NDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLY 652

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR--------------------------EM 396
            +M   G  PN    ++ ++     GK  EA                             
Sbjct: 653 LEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANF 712

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           I+T          I +++V+ GL + G++ +A +++ ++  KGF       + LI     
Sbjct: 713 IDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSA 772

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            G +D A       L+ G   N+V + SLI G C+ G+L  A+SL   ++     P+ +T
Sbjct: 773 SGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAIT 832

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y T+ID   K+G + EA +L  +M+ +G+ PTV TY  +I+  C  G +E+ +KLL++M+
Sbjct: 833 YNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMI 892



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/597 (21%), Positives = 249/597 (41%), Gaps = 56/597 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D     +M +   K K    A   +  M + G+E    A+  +M  Y   G+  +A  +L
Sbjct: 242 DKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRML 301

Query: 200 SMMQKAAVAPNL-------------------------------LICNTAIHVLVVG---- 224
             +     +PN+                               L+ + A+   V+     
Sbjct: 302 DSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQ 361

Query: 225 -NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
             ++  A R L  M  + +  N+  YN +I GYC L R+ +A  ++ EM   G  PD  S
Sbjct: 362 MGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYS 421

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMS 331
           Y +++   CK+  + +  +    M+ +               F   G I++A  L   M 
Sbjct: 422 YNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLML 481

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
           + G  P+ ++ + +++GF + G+ ++A  + ++    G   NT ++   +NGLC   +  
Sbjct: 482 KKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMP 541

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           EA E+++  ++    P+ ITY  +  G  + G +  A  ++ E+   GF PT    N LI
Sbjct: 542 EAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLI 601

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
                  +       + E  N+G + N V + +LI G+C++GDL  A +L  +M      
Sbjct: 602 TGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLV 661

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P+    ++++    + G+ +EA  ++  ++   ++P +   R       ++G+V + +  
Sbjct: 662 PNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPR------LEIGKVANFIDT 715

Query: 572 LEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +    +    +  +N VI  LC  G +E+A  +L  +      AD  T   L+      G
Sbjct: 716 VAGG-NHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASG 774

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
              +A+ +   M +  L P++     +   L   G+   A +L  +   +G I P +
Sbjct: 775 FVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKG-ISPNA 830



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/403 (22%), Positives = 163/403 (40%), Gaps = 75/403 (18%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +QWR   D I Y  +                                      Y + G +
Sbjct: 551 KQWRCPPDIITYRTLFS-----------------------------------GYCKIGDM 575

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A  +L+ ++    AP +   N+ I    +  +  K    L  M   G++PN + Y  L
Sbjct: 576 DRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGAL 635

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I G+C    +  A  L  EM  KG  P+     +++    ++ +  E   +++ +V    
Sbjct: 636 IAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDM 695

Query: 313 L---------------FHDQ-----------------------GRIEEAKELVNQMSQMG 334
           +               F D                        GRIE+AK L+  +   G
Sbjct: 696 IPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKG 755

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            + D  TY+++++G    G +D A  +   M   G  PN V+Y + + GLC +G+   A 
Sbjct: 756 FVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAV 815

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            +      +  +PNAITY+ ++    ++G ++EA  + + M+++G  PT    ++LI  L
Sbjct: 816 SLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGL 875

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF--CQKGDL 495
           C +G M+ A K + + +      N V + +LI+G+  C+  D+
Sbjct: 876 CTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDV 918



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 38/254 (14%)

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           V K F  +    +LL+++L   G++DGA +   E    GC +++ +  S++    Q GDL
Sbjct: 165 VYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDL 224

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
              +++ + M      PD  T   +  A  K   V  A E + +M   G+   +V Y  V
Sbjct: 225 GATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAV 284

Query: 556 IHRYCQVGRVEDLLKLLEK--------------MLSKQKCR------------------- 582
           ++ YC+VG+  D  ++L+               +L K  C                    
Sbjct: 285 MNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQ 344

Query: 583 -----TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
                  +  VI   C  G +E+A ++L +++ +  + +    ++++  Y   G  + A+
Sbjct: 345 LVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAH 404

Query: 638 KVACRMFNRNLIPD 651
            +   M    + PD
Sbjct: 405 NILHEMTGVGVRPD 418


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 222/497 (44%), Gaps = 28/497 (5%)

Query: 137 YRHDP---IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           + H P   + +  +L  ++K K       + R M   GI       + L+ ++    ++ 
Sbjct: 67  HMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVN 126

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  VL+ + K    P+     T I  L +  ++ +AL   ++M   G  P+V+ Y  LI
Sbjct: 127 FAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLI 186

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            G C       AI+L+  M    C PD V Y T++  LCK+++  +  +L  +M+     
Sbjct: 187 NGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITK--- 243

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                               G  P++VT  ++V   C +GE      +L +M      PN
Sbjct: 244 --------------------GISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPN 283

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            +S T  ++ LC  G   +A ++++   +    P+ +TY+ ++ G     ++ EA  V  
Sbjct: 284 AISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFD 343

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            MV KG  P     N LI   C+  +MD A    +E   +    N V + +LI G C  G
Sbjct: 344 MMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVG 403

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            L++A++L  +M  C + PD VTY  ++D L KN  +++A  L+  +    L P +  Y 
Sbjct: 404 RLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYT 463

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            VI   C+ G +ED   L   + SK  +     YN +   LC  G L+EA K+  ++   
Sbjct: 464 IVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDEN 523

Query: 612 ASKADASTCHVLVESYL 628
           A  AD  T + + + +L
Sbjct: 524 ACSADGCTYNTITQGFL 540



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 205/420 (48%), Gaps = 16/420 (3%)

Query: 174 CRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C+P+  +F+ L+      G++  A+++   M      P+++I  T I+ L      + A+
Sbjct: 140 CQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAI 199

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
           R L  M+     P+V+ Y  LI   C   +   A  L  EM  KG SP+ V+  +++  L
Sbjct: 200 RLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYAL 259

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPD 338
           C     K V  L+ +MV DS +  +             +G + +A ++V+ M Q G  PD
Sbjct: 260 CNLGEWKHVNTLLNEMV-DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPD 318

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           VVTYTA+++G C   E+D+A K+   M H GC PN  SY   +NG C   +  +A  +  
Sbjct: 319 VVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFE 378

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
               +   PN +TY+ ++HGL   G+L +A  + REMV  G  P  V   +L+  LC+  
Sbjct: 379 EMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNC 438

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
            +D A   ++         ++  +T +I G C+ G+LE+A  L  ++      P+  TY 
Sbjct: 439 HLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYN 498

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            +   L K G ++EAT+L M+M          TY T+   + +       ++LLE+ML++
Sbjct: 499 IMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLAR 558



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 224/472 (47%), Gaps = 16/472 (3%)

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           + +  L    +M   GI  NV T N LI  +C L+R+  A  ++ ++   GC PD  S+ 
Sbjct: 89  RYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFT 148

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQM 333
           T++  LC E +I E   L +KM+ +             N     G    A  L+  M + 
Sbjct: 149 TLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKG 208

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
            C PDVV Y  +++  C+  +  QA  +  +M   G  PN V+  + +  LC+ G+    
Sbjct: 209 NCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHV 268

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
             ++N   +    PNAI+ + V+  L +EG +++A DVV  M + G  P  V    LI  
Sbjct: 269 NTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDG 328

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C   +MD A K     ++KGCA NV ++ +LI G+C+   +++A+ L ++M   K  P+
Sbjct: 329 HCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPN 388

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH---RYCQVGRVEDLLK 570
           TVTY T+I  L   GR+++A  L  +M++ G +P +VTYR ++    + C + +   LLK
Sbjct: 389 TVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLK 448

Query: 571 LLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
            +E        +  Y  VI+ +C  G LE+A  +   +     K +  T +++      +
Sbjct: 449 AIEGSNLDPDIQI-YTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKR 507

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           G+   A K+   M       D      +++  +   ++  A  L+   + RG
Sbjct: 508 GLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARG 559



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 219/458 (47%), Gaps = 30/458 (6%)

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           L +N     Y   + + DA+   + M      P  V +  ++  + K KR   V  L  K
Sbjct: 40  LLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRK 99

Query: 307 MVNDS--------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           M  DS              N F    R+  A  ++ ++ ++GC PD  ++T ++ G C  
Sbjct: 100 M--DSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLE 157

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
           G++ +A  +  +M   G +P+ V Y   +NGLC  G +  A  ++ + E+    P+ + Y
Sbjct: 158 GQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVY 217

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
             ++H L ++ + ++A ++  EM+ KG  P  V  N L+ +LC  G+       + E ++
Sbjct: 218 GTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVD 277

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
                N ++ T+++   C++G + +A  ++D M+    +PD VTYT +ID       ++E
Sbjct: 278 SKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDE 337

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVI 589
           A ++   M+ KG  P V +Y T+I+ YC++ R++  + L E+M  +QK       YN +I
Sbjct: 338 AVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEM-CRQKLIPNTVTYNTLI 396

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE-----SYLNKGIPLLAYKVACRMF 644
             LC  G L++A  +  +++      D  T  +L++      +L+K + LL       + 
Sbjct: 397 HGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLK-----AIE 451

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             NL PD+++   V + +   G+ E+A  L      +G
Sbjct: 452 GSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKG 489



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 182/389 (46%), Gaps = 23/389 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D +VY  ++  L K +    A  +   M  +GI       + L+ A    G+ ++   +L
Sbjct: 213 DVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLL 272

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M  + + PN +   T +  L     +A+A   ++ M  +G+ P+V+TY  LI G+C  
Sbjct: 273 NEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLR 332

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             + +A+K+ D M  KGC+P+  SY T++   CK +R+                      
Sbjct: 333 SEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERM---------------------- 370

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            ++A  L  +M +   IP+ VTY  +++G C VG L  A  + ++M   G  P+ V+Y  
Sbjct: 371 -DKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRI 429

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L+ LC N    +A  ++   E     P+   Y++V+ G+ R G+L +A D+   +  KG
Sbjct: 430 LLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKG 489

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     N++   LC+ G +D A K   E     C+ +   + ++ +GF +  +   A+
Sbjct: 490 LKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAI 549

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
            LL++M       D  T T ++  LS +G
Sbjct: 550 QLLEEMLARGFSCDVSTTTLLVGMLSDDG 578


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 210/430 (48%), Gaps = 16/430 (3%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           VL  + + G +     F+ L+      GK+  A+++   M      PN +   T IH L 
Sbjct: 131 VLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLC 190

Query: 223 -VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
            VGN  A A+R L  M      PNV+TYN +I       ++ +A+ +  EM  KG SP+ 
Sbjct: 191 KVGNSRA-AIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNV 249

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVN 328
            +Y +++  LCK    K V  LM +MV DS +  +             +G +  A ++V+
Sbjct: 250 STYNSIIHGLCKFSEWKHVATLMNEMV-DSKIMPNVVIFTTLVDALCKEGMVTIAHDVVD 308

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            M Q G  PDVVTYTA+++G C   E+D+A K+   M   GC PN +SY+  +NG C   
Sbjct: 309 VMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQ 368

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  +A  +     +    PN +TY+ ++HGL   G+L +A  +  EMV  G  P  V   
Sbjct: 369 RIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYR 428

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           +L+  LC+   +D A   ++       A ++ ++  +I G C+ G+LE A  L   +   
Sbjct: 429 ILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSK 488

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD  TYT +I+ L   G + EAT+L  +M + G  P   TY  +   + +       
Sbjct: 489 GLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSA 548

Query: 569 LKLLEKMLSK 578
           ++LL++ML +
Sbjct: 549 IQLLQEMLGR 558



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 226/471 (47%), Gaps = 18/471 (3%)

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           +  L   ++M   GI  +V T   +I  +C L+R+     ++ ++   G  PD  ++ T+
Sbjct: 91  STVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTL 150

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDS---------NLFHD---QGRIEEAKELVNQMSQMGC 335
           +  LC E +I E   L +KMV +           L H     G    A  L+  M Q  C
Sbjct: 151 IRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNC 210

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            P+V+TY  +++   +  ++++A  +  +M   G  PN  +Y + ++GLC   +      
Sbjct: 211 EPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVAT 270

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           ++N   +    PN + ++ ++  L +EG ++ A DVV  M+++G  P  V    L+   C
Sbjct: 271 LMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHC 330

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD--PD 513
              +MD A K     + KGCA NV+++++LI G+C+   +++A+ L ++M  C+++  P+
Sbjct: 331 LRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEM--CQRELVPN 388

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VTY T+I  L   GR+ +A  L  +M++ G +P +VTYR ++   C+   ++  + +L+
Sbjct: 389 IVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLK 448

Query: 574 KMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            +          +YN VI+ +C  G LE AG +   +       D  T  +++     +G
Sbjct: 449 AIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQG 508

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +   A K+   M      PD      ++   +   ++  A  L+   + RG
Sbjct: 509 LLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRG 559



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 220/484 (45%), Gaps = 20/484 (4%)

Query: 212 LICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
           ++ N+  H+    N++      L ++   G  P+  T+  LI+G C   +I +A+ L D+
Sbjct: 114 IVINSFCHL----NRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDK 169

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------------NLFHDQG 318
           M  +G  P+ V+Y T++  LCK    +    L+  MV  +              LF D+ 
Sbjct: 170 MVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDR- 228

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           ++ EA  + ++M   G  P+V TY ++++G C+  E      ++ +M      PN V +T
Sbjct: 229 QVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFT 288

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++ LC  G    A ++++   +    P+ +TY+ +M G     ++ EA  V   MV+K
Sbjct: 289 TLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRK 348

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  +  + LI   C+  ++D A    +E   +    N+V + +LI G C  G L +A
Sbjct: 349 GCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDA 408

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           ++L  +M    + PD VTY  ++D L K   +++A  ++  +    L P + +Y  VI  
Sbjct: 409 IALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDG 468

Query: 559 YCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            C+VG +E    L   + SK        Y  +I  LC  G L EA K+  ++       D
Sbjct: 469 MCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPD 528

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
             T +++   +L     L A ++   M  R    D      + E L  +G  +    ++ 
Sbjct: 529 DCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILH 588

Query: 677 RFVE 680
            FV+
Sbjct: 589 EFVQ 592



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 196/424 (46%), Gaps = 16/424 (3%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   G +     +  L+    + G  R A+ +L  M +    PN++  NT I  L    +
Sbjct: 170 MVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQ 229

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +AL     M   GI+PNV TYN +I G C     K    L++EM      P+ V + T
Sbjct: 230 VNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTT 289

Query: 287 VMGYLCKEKRIKEVRDLMEKMVN--------------DSNLFHDQGRIEEAKELVNQMSQ 332
           ++  LCKE  +    D+++ M+               D +    +  ++EA ++ + M +
Sbjct: 290 LVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSE--MDEADKVFDTMVR 347

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            GC P+V++Y+ ++NG+C++  +D+A  + ++M      PN V+Y   ++GLCH G+  +
Sbjct: 348 KGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRD 407

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A  + +        P+ +TY +++  L +   L +A  +++ +      P     N++I 
Sbjct: 408 AIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVID 467

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            +CR G+++ A        +KG   +V  +T +I G C +G L EA  L  +M      P
Sbjct: 468 GMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSP 527

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D  TY  I     +N     A +L+ +ML +G      T   ++      G  + + ++L
Sbjct: 528 DDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQIL 587

Query: 573 EKML 576
            + +
Sbjct: 588 HEFV 591



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 183/396 (46%), Gaps = 23/396 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  +++ L K +    A  +   M  +GI      ++ ++    +  + ++   +++ 
Sbjct: 215 ITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNE 274

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M  + + PN++I  T +  L     +  A   ++ M   G+ P+V+TY  L+ G+C    
Sbjct: 275 MVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSE 334

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A K+ D M  KGC+P+ +SY T++   CK +                       RI+
Sbjct: 335 MDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQ-----------------------RID 371

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +A  L  +M Q   +P++VTY  +++G C VG L  A  +  +M   G  P+ V+Y   L
Sbjct: 372 KAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILL 431

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           + LC      +A  M+   E     P+  +Y++V+ G+ R G+L  A D+   +  KG  
Sbjct: 432 DYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLH 491

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P      ++I  LC +G +  A K  +E    GC+ +   +  + RGF +  +   A+ L
Sbjct: 492 PDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQL 551

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           L +M       D  T T I++ LS +G  +   +++
Sbjct: 552 LQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQIL 587



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 159/328 (48%), Gaps = 23/328 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +++  +++ L K  +   A  V+ +M +RG+E     ++ LM  +    ++  A  V   
Sbjct: 285 VIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDT 344

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +   APN++  +T I+      ++ KA+   E M    + PN++TYN LI G C + R
Sbjct: 345 MVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGR 404

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           ++DAI L  EM   G  PD V+Y  ++ YLCK + + +   ++ K +  SNL        
Sbjct: 405 LRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAML-KAIEGSNL-------- 455

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
                          PD+ +Y  V++G CRVGEL+ A  +   +   G  P+  +YT  +
Sbjct: 456 --------------APDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMI 501

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           NGLC  G   EA ++      +  +P+  TY+++  G  R  +   A  +++EM+ +GF 
Sbjct: 502 NGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFS 561

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQE 469
                I L+++ L  +G     K+ + E
Sbjct: 562 ADASTITLIVEMLSDDGLDQSVKQILHE 589



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/440 (22%), Positives = 180/440 (40%), Gaps = 82/440 (18%)

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           I+EA    N+M  M   P VV +  ++     +        + +QM   G   +  +   
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 380 FLNGLCH-----------------------------------NGKSLEAREMINTSEEEW 404
            +N  CH                                    GK  EA  + +    E 
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
           + PN +TY  ++HGL + G    A  ++R MV+K   P  +  N +I  L ++ +++ A 
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
               E + KG + NV  + S+I G C+  + +   +L+++M   K  P+ V +TT++DAL
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 525 SKNGRV-----------------------------------EEATELMMKMLSKGLVPTV 549
            K G V                                   +EA ++   M+ KG  P V
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGK 607
           ++Y T+I+ YC++ R++  + L E+M  ++       YN +I  LC  G L +A  +  +
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHE 414

Query: 608 VLRTASKADASTCHVLVE-----SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           ++ +    D  T  +L++      +L++ + +L       +   NL PD++    V + +
Sbjct: 415 MVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLK-----AIEGSNLAPDIQSYNIVIDGM 469

Query: 663 ILEGKSEEADTLMLRFVERG 682
              G+ E A  L      +G
Sbjct: 470 CRVGELEAAGDLFSSLSSKG 489


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 224/441 (50%), Gaps = 22/441 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ A  +  K    + +   M+   +  +L   N  I+      +++ AL  L +M 
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+ +T   L+ G+C  +R+ DA+ L+D+M   G  PD V+Y  ++  LCK KR+ 
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207

Query: 299 EVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           +  D  +++                N   +  R  +A  L++ M +    P+V+TY+A++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           + F + G++ +AK++ ++M      P+ V+Y++ +NGLC + +  EA +M +    +   
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            + ++Y+ +++G  +  ++ +   + REM ++G     V  N LIQ   + G +D A++F
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
             +    G + ++  +  L+ G C  G+LE+AL + +DM   + D D VTYTT+I  + K
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----LSKQKCR 582
            G+VEEA  L   +  KGL P +VTY T++   C  G + ++  L  KM    L K  C 
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507

Query: 583 ------TAYNQVIENLCSFGY 597
                 T   ++I+ + S GY
Sbjct: 508 LSDGDITLSAELIKKMLSCGY 528



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 222/447 (49%), Gaps = 25/447 (5%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R  KL +A+ + S M K+   P+++  N  +  +V   K    +   ++M++ GI  ++ 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           T+N +I  +C   ++  A+ ++ +M   G  PD+V+  +++   C+              
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR-------------- 167

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    + R+ +A  LV++M ++G  PD+V Y A+++  C+   ++ A    +++  
Sbjct: 168 ---------RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G +PN V+YTA +NGLC++ +  +A  +++   ++  TPN ITYS ++    + GK+ E
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A ++  EMV+    P  V  + LI  LC   ++D A +     ++KGC  +VV++ +LI 
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC+   +E+ + L  +M       +TVTY T+I    + G V++A E   +M   G+ P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKIL 605
            + TY  ++   C  G +E  L + E M  ++       Y  VI  +C  G +EEA  + 
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458

Query: 606 GKVLRTASKADASTCHVLVESYLNKGI 632
             +     K D  T   ++     KG+
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGL 485



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 198/418 (47%), Gaps = 31/418 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +L  M + G E        L+  + R  ++ +A+ ++  M +    P+++  N  I 
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    ++  A  F + ++  GI PNV+TY  L+ G C+  R  DA +L+ +M  K  +P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           + ++Y  ++                       + F   G++ EAKEL  +M +M   PD+
Sbjct: 259 NVITYSALL-----------------------DAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           VTY++++NG C    +D+A +M   M   GC  + VSY   +NG C   +  +  ++   
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             +     N +TY+ ++ G  + G + +A +   +M   G  P     N+L+  LC  G+
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           ++ A    ++   +   +++V +T++IRG C+ G +EEA SL   + L    PD VTYTT
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           ++  L   G + E   L  KM  +GL+    T           G +    +L++KMLS
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLS 525



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 203/439 (46%), Gaps = 14/439 (3%)

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----ND----- 310
           ++ DAI L  +M      P  V +  ++  + K K+   V  L +KM      ND     
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 311 --SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
              N F    ++  A  ++ +M ++G  PD VT  ++VNGFCR   +  A  ++ +M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G KP+ V+Y A ++ LC   +  +A +     E +   PN +TY+ +++GL    + S+A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             ++ +M+KK   P  +  + L+ +  + GK+  AK+  +E +      ++V ++SLI G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C    ++EA  + D M       D V+Y T+I+   K  RVE+  +L  +M  +GLV  
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILG 606
            VTY T+I  + Q G V+   +   +M           YN ++  LC  G LE+A  I  
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
            + +     D  T   ++      G    A+ + C +  + L PD+     +   L  +G
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484

Query: 667 KSEEADTLMLRFVERGHIQ 685
              E + L  +  + G ++
Sbjct: 485 LLHEVEALYTKMKQEGLMK 503



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 156/324 (48%), Gaps = 27/324 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y+ D + Y  +++ L KTK    A    + + R+GI  RP   +Y  L+     + +  +
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI--RPNVVTYTALVNGLCNSSRWSD 243

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +LS M K  + PN++  +  +   V   K+ +A    E M    I P+++TY+ LI 
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G C   RI +A ++ D M  KGC  D VSY T++   CK K                   
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK------------------- 344

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
               R+E+  +L  +MSQ G + + VTY  ++ GF + G++D+A++   QM   G  P+ 
Sbjct: 345 ----RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +Y   L GLC NG+  +A  +    ++     + +TY+ V+ G+ + GK+ EA  +   
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460

Query: 435 MVKKGFFPTPVEINLLIQSLCREG 458
           +  KG  P  V    ++  LC +G
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKG 484



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 124/264 (46%), Gaps = 2/264 (0%)

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           R+ KL++A D+  +MVK   FP+ V+ N L+ ++ +  K D      ++    G   ++ 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            F  +I  FC    +  ALS+L  M     +PD VT  ++++   +  RV +A  L+ KM
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYL 598
           +  G  P +V Y  +I   C+  RV D     +++  K  +     Y  ++  LC+    
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
            +A ++L  +++     +  T   L+++++  G  L A ++   M   ++ PD+     +
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 659 SERLILEGKSEEADTLMLRFVERG 682
              L L  + +EA+ +    V +G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKG 325


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 150/580 (25%), Positives = 254/580 (43%), Gaps = 64/580 (11%)

Query: 80  EVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRH 139
           EV  +I+  +   P LE     ++  L P+ + +++++  + ++  +FF WA    R+R 
Sbjct: 35  EVFTVIKTMNPMEPALE----PMVPFLSPKIVTSIIQNPPNPQLGFRFFIWASNFKRFRA 90

Query: 140 --------DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGK 191
                   D ++    LE+  +T         L  +   GI+   +AF  L+  Y + G 
Sbjct: 91  WESCDLITDLLINQNGLELYCQT---------LEALKNGGIKVHNDAFFVLIKVYLKMGL 141

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
              AM     M+     P++   N  + VL+  N L  AL    RM      PNV T++ 
Sbjct: 142 TDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSI 201

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI G C    +KDA+ L DEM  +G  PD  +Y  V+  LC+ KR+              
Sbjct: 202 LIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRV-------------- 247

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                    ++A  L ++M   G  PD VT  A++NGFC +  +D+A  +L+     G  
Sbjct: 248 ---------DDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYV 298

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            +   Y+  + GL    +  + + +     E+   P+   Y+++M GL   GK+ +A ++
Sbjct: 299 LDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALEL 358

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           + EM + G  P  V  N+LI+  C  G +  A+    E     C  NV  ++ LI G C+
Sbjct: 359 LNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCR 418

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G   +A  + ++M      P  VT+ ++ID L K G++E+A  L  KM           
Sbjct: 419 NGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM----------- 467

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
                    ++GR   L   L +  S      +  +++E LC  G + +A +IL ++  +
Sbjct: 468 ---------EIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADS 518

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
                  T ++LV  +   G    AYK+   M  + L PD
Sbjct: 519 GDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPD 558



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 225/451 (49%), Gaps = 33/451 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
           D   Y M+L++L +      A  V   M +  + C P    FS L+    ++G +++A++
Sbjct: 160 DVYTYNMILDVLIQKNFLLLALTVYTRMMK--LNCLPNVATFSILIDGLCKSGNVKDALH 217

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  + P+       I  L    ++  A R  ++M+ +G+ P+ +T N L+ G+C
Sbjct: 218 LFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFC 277

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
            L R+ +A  L+      G   D   Y  ++  L + KR ++V+ L  KM+ D+      
Sbjct: 278 MLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVY 337

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                     + G++ +A EL+N+M++ G +PD V Y  ++ GFC +G L +A+ +  ++
Sbjct: 338 LYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEI 397

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
             H C PN  +Y+  ++G+C NG + +A+E+ N  E+    P+A+T++ ++ GL + G+L
Sbjct: 398 SRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQL 457

Query: 426 SEACDVVREM-----------VKKGFFPTPV----EINLLIQSLCREGKMDGAKKFMQEC 470
            +A  +  +M           + +G  P+ V     +  +++ LC  G +  A + + + 
Sbjct: 458 EKAHLLFYKMEIGRNPSLFLRLSQG--PSHVLDSASLQKMVEQLCDSGLIHKAYRILMQL 515

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
            + G A  +  +  L+ GFC+ G+   A  L  +M      PDTVTY T+I+ L +  R 
Sbjct: 516 ADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQRE 575

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           E+A ++  +M   G  P    YRT++   C+
Sbjct: 576 EDAYKVFDQMEKNGCTPDAAVYRTMMTWMCR 606



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 146/300 (48%), Gaps = 31/300 (10%)

Query: 160 AKRV--LRLMARRGIE--CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI 213
           AKR   ++L+ R+ IE   +P+ + Y  +M   + AGK+R+A+ +L+ M ++ V P+ + 
Sbjct: 314 AKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVC 373

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
            N  I        L++A      +      PNV TY+ LI G C     +DA ++ +EM 
Sbjct: 374 YNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEME 433

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------------------VNDSNLFH 315
             GC P  V++ +++  LCK  ++++   L  KM                  V DS    
Sbjct: 434 KLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQ 493

Query: 316 -------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                  D G I +A  ++ Q++  G  P + TY  +VNGFC++G  + A K+ ++M   
Sbjct: 494 KMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFK 553

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G  P+TV+Y   +NGL    +  +A ++ +  E+   TP+A  Y  +M  + R  +L  A
Sbjct: 554 GLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRA 613



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 152/377 (40%), Gaps = 79/377 (20%)

Query: 138 RHD--PIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGK 191
           RHD  P V  Y +++  + +  L + A+ +   M + G  C P A  F+ L+    + G+
Sbjct: 399 RHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLG--CYPSAVTFNSLIDGLCKTGQ 456

Query: 192 LRNAMYVL---------SMMQKAAVAPNLLICNTAIHVLVV----GNKLAKALRFLERMQ 238
           L  A  +          S+  + +  P+ ++ + ++  +V        + KA R L ++ 
Sbjct: 457 LEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLA 516

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
            +G  P + TYN L+ G+C L     A KL  EM  KG SPD V+Y T++  L + +R  
Sbjct: 517 DSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQRE- 575

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                                 E+A ++ +QM + GC PD   Y  ++   CR  EL +A
Sbjct: 576 ----------------------EDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRA 613

Query: 359 -------------------------------KKMLQQMYHHGCKPNTVS---YTAFLNGL 384
                                          +K ++ +     K N      Y  +L GL
Sbjct: 614 FSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGL 673

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C   +  EA ++    EE            +++ L +EG L  A DV    ++KG+    
Sbjct: 674 CQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKGYLLRR 733

Query: 445 VEINLLIQSLC-REGKM 460
              N ++  L  R+G+M
Sbjct: 734 RVANRILTKLVRRKGEM 750


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 221/454 (48%), Gaps = 29/454 (6%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI     + + L+  + R   +     VL  + K  + PN++  +T I+   +  K
Sbjct: 117 MEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGK 176

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +A+   + M   G  PNV +Y+ +IKG C + +  + IKL++ M + GC PD V Y T
Sbjct: 177 IGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNT 236

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LCK++           +VN            EA  +  +M   G +P VVTYT+++
Sbjct: 237 IVDRLCKDR-----------LVN------------EAVHIFCKMKGTGILPTVVTYTSLI 273

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G   +G   +A  +L +M      P+ V+++  ++ +C  G+  EAR ++ T  E    
Sbjct: 274 HGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVE 333

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+  TY+ +M+G     ++ EA  V   M+ KG  P     ++L+   C+  ++D AK+ 
Sbjct: 334 PDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQL 393

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
             E  ++G   + V++ +LI G CQ     EA  L  DM+     P+ VTY+ ++D LSK
Sbjct: 394 FDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSK 453

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTA 584
            G +++A  L   M + GL P +VTY  +I   C+ G+ +D  +L  ++  K  Q     
Sbjct: 454 QGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWV 513

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
               I+ +C  G L+EA     K  R   K D S
Sbjct: 514 CTPTIDGVCKGGLLDEA----HKAFRQMEKDDCS 543



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 177/351 (50%), Gaps = 12/351 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +  +M  RG +    ++S ++    R GK    + +L  M+     P+++I NT + 
Sbjct: 180 AIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVD 239

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L     + +A+    +M+  GI P V+TY  LI G  +L R K+A  L++EM      P
Sbjct: 240 RLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMP 299

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
           D V++  ++  +CKE  + E R +++ M                N +  +  + EA+++ 
Sbjct: 300 DLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVF 359

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
             M   G +PDV +++ +VNG+C+   +D+AK++  +M H G  P+TVSY   ++GLC  
Sbjct: 360 EVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQA 419

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            + LEA E+        + PN +TYS+++  L ++G L +A  + R M   G  P  V  
Sbjct: 420 RRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTY 479

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           N++I  +C+ GK   A++   E   KG   N    T  I G C+ G L+EA
Sbjct: 480 NIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEA 530



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 185/388 (47%), Gaps = 6/388 (1%)

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVN---QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
           +  +V    LF    R++  K +V+   QM   G   DV++ T ++N FCR+  +D    
Sbjct: 88  LPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFS 147

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L ++   G +PN ++++  +NG C  GK   A E+ +      + PN  +YS+++ GL 
Sbjct: 148 VLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLC 207

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           R GK +E   ++  M   G  P  V  N ++  LC++  ++ A     +    G    VV
Sbjct: 208 RVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVV 267

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            +TSLI G    G  +EA  LL++M      PD V ++ +ID + K G V EA  ++  M
Sbjct: 268 TYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYL 598
              G+ P V TY T+++ YC    V +  K+ E M+SK +     +++ ++   C    +
Sbjct: 328 TEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRI 387

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           +EA ++  ++       D  + + L+        PL A ++   M +    P+L     +
Sbjct: 388 DEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSIL 447

Query: 659 SERLILEGKSEEADTLMLRFVERGHIQP 686
            + L  +G  ++A  L  R +E   ++P
Sbjct: 448 LDCLSKQGYLDQAMGL-FRAMENSGLKP 474



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/479 (22%), Positives = 211/479 (44%), Gaps = 60/479 (12%)

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           AL     M      P+++ +  L      +   K  + L  +M + G S D +S   ++ 
Sbjct: 75  ALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILIN 134

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
             C+                   L H    ++    ++ ++ ++G  P+V+T++ ++NGF
Sbjct: 135 CFCR-------------------LCH----VDYGFSVLGKIIKLGLEPNVITFSTLINGF 171

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI------------ 397
           C  G++ +A ++   M   G KPN  SY+  + GLC  GK+ E  +++            
Sbjct: 172 CIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDV 231

Query: 398 ---NTSEEEW--------------------WTPNAITYSVVMHGLRREGKLSEACDVVRE 434
              NT  +                        P  +TY+ ++HGLR  G+  EA  ++ E
Sbjct: 232 VIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNE 291

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M      P  V  ++LI  +C+EG++  A+  ++     G   +V  + +L+ G+C + +
Sbjct: 292 MKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRME 351

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           + EA  + + M    + PD  +++ +++   K  R++EA +L  +M  +GL+P  V+Y T
Sbjct: 352 VVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNT 411

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I   CQ  R  +  +L + M S         Y+ +++ L   GYL++A  +   +  + 
Sbjct: 412 LISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSG 471

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
            K D  T +++++     G    A ++   +  + L P+  +C    + +   G  +EA
Sbjct: 472 LKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEA 530



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 162/337 (48%), Gaps = 23/337 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D ++Y  +++ L K +L   A  +   M   GI      ++ L+      G+ + A  +L
Sbjct: 230 DVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLL 289

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M+   + P+L+  +  I ++    ++++A   L+ M   G+ P+V TYN L+ GYC  
Sbjct: 290 NEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLR 349

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             + +A K+ + M  KG  PD  S+  ++   CK K                       R
Sbjct: 350 MEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAK-----------------------R 386

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           I+EAK+L ++M+  G IPD V+Y  +++G C+     +A+++ + M+ +G  PN V+Y+ 
Sbjct: 387 IDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSI 446

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L+ L   G   +A  +    E     P+ +TY++++ G+ + GK  +A ++  E+  KG
Sbjct: 447 LLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKG 506

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
             P        I  +C+ G +D A K  ++     C+
Sbjct: 507 LQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCS 543


>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 232/492 (47%), Gaps = 37/492 (7%)

Query: 92  SPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWR----YRHDPIVYYMM 147
           SP     L      L P  +  V++SQ +   AL FF WA         Y H  + Y  +
Sbjct: 98  SPTSISPLSQFAPFLNPXLVIQVIKSQKNPYHALFFFNWASNPNPNPNNYSHSHLCYVAI 157

Query: 148 LEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV 207
            ++L    L   A  +L+   R        A +  + AY   G +R A++     +K   
Sbjct: 158 TDLLISHGLFSTASSLLQSHHR----LSDFAAAKFVKAYGDRGDIRGAIHWFHRAKKMES 213

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT-PNVLTYNCLIKGYCDLHRIKDAI 266
              L   N  + V V  N++  A    +++   G+  P+V TY  +I+GYC +  I++A 
Sbjct: 214 GRCLFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAK 273

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKEL 326
            + DEM   GC P+ V+Y T++   CK                       +G +E A ++
Sbjct: 274 NVFDEM---GCKPNLVTYNTMINGFCK-----------------------KGLMESAMKI 307

Query: 327 VNQMSQM-GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           V+QM++   C+PD VTYT +++G+C+ GEL++A K +++M    C+PN ++Y A + GLC
Sbjct: 308 VDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLC 367

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            NG   EA+ M+          N  T++ ++ GL   GKL +A   ++EMV  G      
Sbjct: 368 LNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAK 427

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
              +++   C+ GK D A   ++E  ++G   +V +F ++ R   + G  ++A  +L  M
Sbjct: 428 AYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQM 487

Query: 506 YLCKKDPDTVTYTTIIDALSK-NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
                 P+ ++Y+T+ID L K  GR+ E  E +  M   G       Y  ++  YC+ G 
Sbjct: 488 KQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGN 547

Query: 565 VEDLLKLLEKML 576
            +  ++L  +ML
Sbjct: 548 ADMAMRLFCEML 559



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 178/348 (51%), Gaps = 10/348 (2%)

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            +F    RI  A+ + +Q+ + G + PDV TYT ++ G+C++G ++ AK +  +M   GC
Sbjct: 225 GVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GC 281

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINT-SEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
           KPN V+Y   +NG C  G    A ++++  +E E   P+ +TY+ ++ G  + G+L EA 
Sbjct: 282 KPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAM 341

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
             + EMV +   P  +  N +I  LC  G +D AK+ M      G   NV   TS+++G 
Sbjct: 342 KYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGL 401

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C  G L++A   L +M     + D   Y  +++   K G+ ++A  L+ +M S+G+ P+V
Sbjct: 402 CVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSV 461

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLC-SFGYLEEAGKIL 605
            ++  V     + G+  D   L+ + + +  C     +Y+ VI+ LC + G + E  + +
Sbjct: 462 SSFNAVFRILVESGKT-DKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFV 520

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
             + R     DAS    LV+ Y   G   +A ++ C M +   + +L+
Sbjct: 521 DDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLE 568



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 212/454 (46%), Gaps = 31/454 (6%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           + D R A+ +F+ A +    R     Y  +L +  K      A+ V   + + G+  +P+
Sbjct: 195 RGDIRGAIHWFHRAKKMESGRC-LFSYNAILGVFVKANRIMLARAVFDQIVKEGV-VKPD 252

Query: 178 AFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
             +Y  +   Y + G + NA  V   M      PNL+  NT I+       +  A++ ++
Sbjct: 253 VSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAMKIVD 309

Query: 236 RM-QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
           +M +     P+ +TY  LI GYC    +++A+K ++EM  + C P+ ++Y  ++  LC  
Sbjct: 310 QMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLN 369

Query: 295 KRIKEVRDLMEKM----VNDSNLFHDQ--------GRIEEAKELVNQMSQMGCIPDVVTY 342
             + E + +M +M    + D+   H          G++++A   + +M  +G   D   Y
Sbjct: 370 GNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAY 429

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             VVN +C++G+ D A  +L++M   G  P+  S+ A    L  +GK+ +A  ++   ++
Sbjct: 430 GVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQ 489

Query: 403 EWWTPNAITYSVVMHGL-RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
              TPN ++YS V+ GL + +G++ E  + V +M + G        + L++  C +G  D
Sbjct: 490 LGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNAD 549

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A +   E L+ G  +N+ +F + ++G   K    E     ++M       D   Y  I+
Sbjct: 550 MAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRIL 609

Query: 522 DA-LSK---NGRVEEATELMMKMLSKGLVPTVVT 551
           D  L K   NGR E          +KG+  T+V+
Sbjct: 610 DEHLCKNLGNGRREHQQN------TKGVPKTLVS 637



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 145/277 (52%), Gaps = 7/277 (2%)

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFF-PTPVEINLLIQSLCREGKMDGAKKFMQ 468
            +Y+ ++    +  ++  A  V  ++VK+G   P       +I+  C+ G ++ AK    
Sbjct: 218 FSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFD 277

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK-DPDTVTYTTIIDALSKN 527
           E    GC  N+V + ++I GFC+KG +E A+ ++D M   +   PDTVTYTT+ID   K 
Sbjct: 278 E---MGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKR 334

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-LSKQKCRTA-Y 585
           G +EEA + M +M+S+   P V+TY  +I+  C  G V++  +++ +M L+  K   A +
Sbjct: 335 GELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATH 394

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
             +++ LC  G L++A + L +++    +ADA    V+V  Y   G    A  +   M +
Sbjct: 395 TSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKS 454

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           R + P +     V   L+  GK+++A  ++ +  + G
Sbjct: 455 RGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLG 491


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 146/573 (25%), Positives = 265/573 (46%), Gaps = 52/573 (9%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  V  L+AR+G     +  ++ + +  +A +      V  +M + A  P++      I+
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGA-CPDVFSFTNVIN 228

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L  G K+  A+    +M+  GI+PNV+TYNC+I G C   R+ +A +L ++M +KG  P
Sbjct: 229 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 288

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNL---FHDQGRIEEAKELV 327
           +  +Y  ++  L K     +V  ++++M+           +NL   +   G IE A ++ 
Sbjct: 289 NLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIK 348

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG---------------CK- 371
           + M      P  VT  +++ GFC+  +++ A+  L+++   G               CK 
Sbjct: 349 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 408

Query: 372 -------------------PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
                              P+ +  T  + GLC +GK LEA E+     E+    + +T 
Sbjct: 409 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 468

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           + ++HGL   GKL EA  +V+EM+++G     +  N LI   C EGK++G  +  +E   
Sbjct: 469 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 528

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +G   ++  +  L+RG C  G L++A+ L D+        +  TY  +++   K  R+E+
Sbjct: 529 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 588

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK---QKCRTAYNQVI 589
              L  ++LSK +    + Y  +I  +CQ G V   L+LLE M SK     C T Y+ +I
Sbjct: 589 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCAT-YSSLI 647

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
             +C+ G +E+A  ++ ++ +     +      L+  Y   G    A      M + N+ 
Sbjct: 648 HGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIH 707

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           P+      + +     G  E+A+ L+++  E G
Sbjct: 708 PNKFTYTVMIDGYCKLGNMEKANNLLIKMKESG 740



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 215/454 (47%), Gaps = 12/454 (2%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  + +V+  +++   K    +GA ++  +M  + I         LM  + ++ ++ +A 
Sbjct: 321 FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAE 380

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             L  +  + ++ +   C + +H L    +   A RF + M      P+ L    L+ G 
Sbjct: 381 NALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGL 440

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE----VRDLMEKMVNDSN 312
           C   +  +A +L   +  KG    KV+   ++  LC   ++ E    V++++E+ +    
Sbjct: 441 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDR 500

Query: 313 L--------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           +        F ++G++E    L  +M++ G  PD+ TY  ++ G C VG+LD A K+  +
Sbjct: 501 ITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDE 560

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
               G   N  +Y   + G C   +  +   + N    +    N+I Y++++    + G 
Sbjct: 561 FKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGN 620

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           ++ A  ++  M  KG  P     + LI  +C  G ++ AK  + E   +G   NVV +T+
Sbjct: 621 VAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTA 680

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G+C+ G ++ A S   +M      P+  TYT +ID   K G +E+A  L++KM   G
Sbjct: 681 LIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESG 740

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           +VP VVTY  + + +C+   +++  K+ ++M ++
Sbjct: 741 IVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATE 774



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 193/415 (46%), Gaps = 23/415 (5%)

Query: 145 YMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQK 204
           Y ++  L K      A R  ++M  R         + L+    + GK   A  +   + +
Sbjct: 399 YSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLE 458

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
                + +  N  IH L    KL +A R ++ M   G+  + +TYN LI G+C+  +++ 
Sbjct: 459 KGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEG 518

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAK 324
             +L +EM  +G  PD  +Y  ++  LC                       + G++++A 
Sbjct: 519 CFRLREEMTKRGIQPDIYTYNFLLRGLC-----------------------NVGKLDDAI 555

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +L ++    G I ++ TY  ++ G+C+   ++  + +  ++     + N++ Y   +   
Sbjct: 556 KLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 615

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C NG    A +++   + +   PN  TYS ++HG+   G + +A  ++ EM K+GF P  
Sbjct: 616 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 675

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V    LI   C+ G+MD A+    E ++     N   +T +I G+C+ G++E+A +LL  
Sbjct: 676 VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIK 735

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
           M      PD VTY  + +   K   ++ A ++  +M ++GL    +TY T++H +
Sbjct: 736 MKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 68/146 (46%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  ++  +    L + AK ++  M + G       ++ L+  Y + G++  A      M
Sbjct: 642 TYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 701

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
               + PN       I        + KA   L +M+ +GI P+V+TYN L  G+C  + +
Sbjct: 702 ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDM 761

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVM 288
            +A K+ D+M  +G   D+++Y T++
Sbjct: 762 DNAFKVCDQMATEGLPVDEITYTTLV 787


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 232/484 (47%), Gaps = 15/484 (3%)

Query: 164 LRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           L LM R G+E     F+ ++ A  R G +  A  +   +Q   +APN  I NT +     
Sbjct: 305 LHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFK 364

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
             ++A+A    E M+  G++P+ +T+N L+ G+    RI+D+ +L+ ++ + G   D   
Sbjct: 365 AREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSL 424

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMS 331
           Y  ++  LC   R+ E   L+++++                 +   G  ++A E    M 
Sbjct: 425 YDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMV 484

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
           + G  P   T  +++ G CR G L +A+ +L +M   G   N V+YT  L+G        
Sbjct: 485 RCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLE 544

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
            A+ +    +E    P+A+ ++ ++ GL + G + EA +V  EM   GF P     N LI
Sbjct: 545 GAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLI 604

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
           + LC  G++  A K  +E   KG   +   F  +I GFC++G ++ A+    DM      
Sbjct: 605 RGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLL 664

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD  T+  +I    K   +  A E++ KM S GL P + TY T +H YC++ ++   + +
Sbjct: 665 PDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVII 724

Query: 572 LEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
           L++++S         YN ++  +CS   L+ A  +  K+L+     +  T ++L+  +  
Sbjct: 725 LDQLISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIPNVITTNMLLSHFCK 783

Query: 630 KGIP 633
           +G+P
Sbjct: 784 QGMP 787



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 231/520 (44%), Gaps = 49/520 (9%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+  +   G    A+ VL MM+   V P L      + +L+         +  + M   G
Sbjct: 183 LLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKG 242

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             P+ LT+N +I G+C  HR+     L+  MP   CSPD V++  ++   C   R     
Sbjct: 243 PRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAI 302

Query: 302 DLMEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
           D +  MV           + + H    +G + EA++L + +  MG  P+   Y  +++G+
Sbjct: 303 DWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGY 362

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG-------------------------- 383
            +  E+ QA  + ++M   G  P+ V++   + G                          
Sbjct: 363 FKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDS 422

Query: 384 ---------LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
                    LC  G+  EA +++    E+  T + + ++ ++    R G   +A +  R 
Sbjct: 423 SLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRI 482

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MV+ GF P+    N L+  LCR+G +  A+  +   L KG  +N V +T L+ G+ +  +
Sbjct: 483 MVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNN 542

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           LE A  L  +M      PD V +T +ID LSK G VEEA E+ ++M + G VP    Y +
Sbjct: 543 LEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNS 602

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I   C  GRV + LKL ++M  K        +N +I+  C  G ++ A +    + R  
Sbjct: 603 LIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIG 662

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
              D  T ++L+  Y      + A ++  +M++  L PD+
Sbjct: 663 LLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDI 702



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 206/447 (46%), Gaps = 41/447 (9%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           + R+L+ +   G+      +  ++ +   AG+L  AM +L  + +  +  +++  N+ I 
Sbjct: 406 SDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIG 465

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                    KA      M   G TP+  T N L+ G C    +++A  L+  M  KG   
Sbjct: 466 AYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPI 525

Query: 280 DKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPD 338
           +KV+Y  ++ GY               KM N          +E A+ L  +M + G  PD
Sbjct: 526 NKVAYTVLLDGYF--------------KMNN----------LEGAQFLWKEMKERGIYPD 561

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            V +TA+++G  + G +++A ++  +M   G  PN  +Y + + GLC  G+  EA ++  
Sbjct: 562 AVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEK 621

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
              ++    +  T+++++ G  R G++  A +   +M + G  P     N+LI   C+  
Sbjct: 622 EMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAF 681

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
            M GA + + +  + G   ++  + + + G+C+   + +A+ +LD +      PDTVTY 
Sbjct: 682 DMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYN 741

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           T++  +  +  ++ A  L  K+L  G +P V+T   ++  +C+ G  E      + ++  
Sbjct: 742 TMLSGICSD-ILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPE------KALIWG 794

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKIL 605
           QK R           SFG+ E + +IL
Sbjct: 795 QKLRE---------ISFGFDEISYRIL 812



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 174/372 (46%), Gaps = 13/372 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  +Y +M+  L        A ++L+ +  +G+     AF+ L+ AYSRAG    A    
Sbjct: 421 DSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAY 480

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +    P+   CN+ +  L     L +A   L RM   G   N + Y  L+ GY  +
Sbjct: 481 RIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKM 540

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLF 314
           + ++ A  L  EM  +G  PD V++  ++  L K   ++E  ++  +M     V ++  +
Sbjct: 541 NNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAY 600

Query: 315 H-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +       D GR+ EA +L  +M Q G + D  T+  +++GFCR G++  A +    M  
Sbjct: 601 NSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQR 660

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+  ++   + G C     + A E++N        P+  TY+  MHG  R  K+++
Sbjct: 661 IGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQ 720

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++ +++  G  P  V  N ++  +C +  +D A     + L  G   NV+    L+ 
Sbjct: 721 AVIILDQLISAGIVPDTVTYNTMLSGICSD-ILDRAMILTAKLLKMGFIPNVITTNMLLS 779

Query: 488 GFCQKGDLEEAL 499
            FC++G  E+AL
Sbjct: 780 HFCKQGMPEKAL 791



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/377 (22%), Positives = 169/377 (44%), Gaps = 28/377 (7%)

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           L +    Q A+ +L  M  +G      A++ L+  Y +   L  A ++   M++  + P+
Sbjct: 502 LCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPD 561

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
            +     I  L     + +A      M   G  PN   YN LI+G CD  R+ +A+KL  
Sbjct: 562 AVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEK 621

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQM 330
           EM  KG   D  ++  ++   C+                       +G+++ A E    M
Sbjct: 622 EMRQKGLLSDTFTFNIIIDGFCR-----------------------RGQMKFAIETFLDM 658

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            ++G +PD+ T+  ++ G+C+  ++  A +++ +MY  G  P+  +Y  +++G C   K 
Sbjct: 659 QRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKM 718

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            +A  +++        P+ +TY+ ++ G+  +  L  A  +  +++K GF P  +  N+L
Sbjct: 719 NQAVIILDQLISAGIVPDTVTYNTMLSGICSD-ILDRAMILTAKLLKMGFIPNVITTNML 777

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           +   C++G  + A  + Q+        + +++  L + +C    +++ + L+   Y    
Sbjct: 778 LSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYCL---MQDDVELVRGTYEKHL 834

Query: 511 DPDTVTYTTIIDALSKN 527
             D + Y T  D  S+N
Sbjct: 835 FMDFLMYIT-FDYFSRN 850



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 179/382 (46%), Gaps = 13/382 (3%)

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           F + G   EA E++  M  +G  P + + T ++    R+G+     K+ + M   G +P+
Sbjct: 187 FLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPS 246

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            +++ A + G C   + +    +++   +   +P+ +T++++++     G+   A D + 
Sbjct: 247 NLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLH 306

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            MV+ G  P+      ++ +LCREG +  A+K      + G A N   + +L+ G+ +  
Sbjct: 307 LMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAR 366

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           ++ +A  L ++M      PD VT+  ++    K GR+E++  L+  ++  GL      Y 
Sbjct: 367 EVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYD 426

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRT 611
            ++   C  GR+++ +KLL+++L K    +  A+N +I      G  ++A +    ++R 
Sbjct: 427 VMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRC 486

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG----- 666
                +STC+ L+     KG    A  +  RM  +   P      KV+  ++L+G     
Sbjct: 487 GFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGF-P----INKVAYTVLLDGYFKMN 541

Query: 667 KSEEADTLMLRFVERGHIQPKS 688
             E A  L     ERG I P +
Sbjct: 542 NLEGAQFLWKEMKERG-IYPDA 562



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 12/277 (4%)

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           + ++ G    G   EA +V+R M   G  P    I +L++ L R G      K  ++ + 
Sbjct: 181 NTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIF 240

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM--YLCKKDPDTVTYTTIIDALSKNGRV 530
           KG   + + F ++I GFC++  +    SLL  M  ++C   PD VT+  +I+A    GR 
Sbjct: 241 KGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCS--PDVVTFNILINACCIGGRT 298

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIE 590
             A + +  M+  G+ P+V T+ T++H  C+ G V +  KL + +   Q    A N  I 
Sbjct: 299 WVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGI---QDMGIAPNAAIY 355

Query: 591 NLCSFGYLE-----EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           N    GY +     +A  +  ++  T    D  T ++LV  +   G    + ++   +  
Sbjct: 356 NTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIV 415

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             L  D  L   +   L   G+ +EA  L+   +E+G
Sbjct: 416 SGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKG 452


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 216/423 (51%), Gaps = 12/423 (2%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           R M   GI       S L+  +S+ G+   +  VL+ + K    PN++   T I  L + 
Sbjct: 96  RQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLK 155

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            ++ +AL+F +++   G   N ++Y  LI G C + +   A++L+  +  K   P+ V Y
Sbjct: 156 GQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMY 215

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
            T++  +CK K + E  DL  +MV+              + F   G++++A +L N+M  
Sbjct: 216 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIF 275

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
               P+V T+  +V+GFC+   L +AK +L  M   G KP+  +Y + ++  C   +  +
Sbjct: 276 ENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNK 335

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A+ + NT  +    PN  +YS+++HG  +  K+ EA ++ +EM      P  V  N LI 
Sbjct: 336 AKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLID 395

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+ GK+  A K + E  ++G   + + + S++   C+   +++A++LL  M      P
Sbjct: 396 GLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP 455

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D  TYTT++D L KNGR+E+A  +   +L KG +  V  Y  +I  +C  G  ++ L LL
Sbjct: 456 DICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLL 515

Query: 573 EKM 575
            KM
Sbjct: 516 SKM 518



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/520 (23%), Positives = 247/520 (47%), Gaps = 25/520 (4%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           RL+ ++  +     F  ++ +  ++      + +   M+   +  +L+I +  I+     
Sbjct: 61  RLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQL 120

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            +   +   L ++   G  PNV+T   LIKG C   +I  A++  D++   G   +KVSY
Sbjct: 121 GQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSY 180

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            T++  LCK                        G+   A +L+ ++      P+VV Y  
Sbjct: 181 GTLINGLCK-----------------------VGQTSAALQLLRRVDGKLVQPNVVMYNT 217

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++  C+V  +++A  +  +M   G  P+ V+Y A ++G C  GK  +A ++ N    E 
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             PN  T+++++ G  +E +L EA +V+  M+K+G  P     N L+   C   +++ AK
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAK 337

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
                   +G   N+ +++ +I GFC+   ++EA++L  +M+     PD VTY ++ID L
Sbjct: 338 HIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGL 397

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCR 582
            K G++  A +L+ +M  +G+    +TY +++   C+  +V+  + LL KM  +  Q   
Sbjct: 398 CKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDI 457

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             Y  +++ LC  G LE+A  +   +L      D +    +++ + + G+   +  +  +
Sbjct: 458 CTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSK 517

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           M     IP+    + +   L  + ++++A+ L+   + RG
Sbjct: 518 MEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 207/409 (50%), Gaps = 23/409 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  + + Y  ++  L K      A ++LR +  + ++     ++ ++ +  +   +  A 
Sbjct: 173 FHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAF 232

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            + S M    ++P+++  N  I    +  K+  A     +M    I PNV T+N L+ G+
Sbjct: 233 DLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGF 292

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   R+K+A  ++  M  +G  PD  +Y ++M   C    +KEV                
Sbjct: 293 CKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYC---LVKEV---------------- 333

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
                +AK + N +SQ G  P++ +Y+ +++GFC++ ++D+A  + ++M+ +   P+ V+
Sbjct: 334 ----NKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVT 389

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y + ++GLC  GK   A ++++   +     + ITY+ ++  L +  ++ +A  ++ +M 
Sbjct: 390 YNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 449

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            +G  P       L+  LC+ G+++ A+   ++ L KG  ++V  +T++I+GFC  G  +
Sbjct: 450 DEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFD 509

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           E+L LL  M      P+ VTY  II +L      ++A +L+ +M+++GL
Sbjct: 510 ESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 198/429 (46%), Gaps = 24/429 (5%)

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEE 322
           K   P    +  ++G L K      V  L  +M  +             N F   G+   
Sbjct: 66  KNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPL 125

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           +  ++ ++ +MG  P+V+T T ++ G C  G++ QA +   ++   G   N VSY   +N
Sbjct: 126 SFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLIN 185

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC  G++  A +++   + +   PN + Y+ ++  + +   ++EA D+  EMV KG  P
Sbjct: 186 GLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 245

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V  N LI   C  GKM  A     + + +    NV  F  L+ GFC++  L+EA ++L
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
             M      PD  TY +++D       V +A  +   +  +G+ P + +Y  +IH +C++
Sbjct: 306 AMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKI 365

Query: 563 GRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
            +V++ + L ++M           YN +I+ LC  G +  A K++ ++       D  T 
Sbjct: 366 KKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITY 425

Query: 621 HVLVESY-----LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           + ++++      ++K I LL      +M +  + PD+     + + L   G+ E+A  + 
Sbjct: 426 NSILDALCKNHQVDKAIALLT-----KMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVF 480

Query: 676 LRFVERGHI 684
              + +G+I
Sbjct: 481 EDLLVKGYI 489



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 159/306 (51%), Gaps = 29/306 (9%)

Query: 140 DPIVYY--MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           +P VY   ++++   K +  + AK VL +M ++GI  +P+ F+Y  LM  Y    ++  A
Sbjct: 279 NPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGI--KPDVFTYNSLMDRYCLVKEVNKA 336

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
            ++ + + +  V PN+   +  IH      K+ +A+   + M    I P+V+TYN LI G
Sbjct: 337 KHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDG 396

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
            C L +I  A+KL+DEM  +G   DK++Y +++  LCK  ++                  
Sbjct: 397 LCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQV------------------ 438

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
                ++A  L+ +M   G  PD+ TYT +V+G C+ G L+ A+ + + +   G   +  
Sbjct: 439 -----DKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVN 493

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            YTA + G C +G   E+ ++++  EE    PNA+TY +++  L  + +  +A  ++REM
Sbjct: 494 IYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553

Query: 436 VKKGFF 441
           + +G F
Sbjct: 554 ITRGLF 559



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 175/361 (48%), Gaps = 5/361 (1%)

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           QM   G   D+V  + ++N F ++G+   +  +L ++   G +PN ++ T  + GLC  G
Sbjct: 97  QMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKG 156

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  +A +  +      +  N ++Y  +++GL + G+ S A  ++R +  K   P  V  N
Sbjct: 157 QIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYN 216

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            +I S+C+   ++ A     E ++KG + +VV + +LI GFC  G +++A  L + M   
Sbjct: 217 TIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFE 276

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
             +P+  T+  ++D   K  R++EA  ++  M+ +G+ P V TY +++ RYC V  V   
Sbjct: 277 NINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNK- 335

Query: 569 LKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            K +   +S++       +Y+ +I   C    ++EA  +  ++       D  T + L++
Sbjct: 336 AKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLID 395

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ 685
                G    A K+   M +R +  D      + + L    + ++A  L+ +  + G IQ
Sbjct: 396 GLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG-IQ 454

Query: 686 P 686
           P
Sbjct: 455 P 455


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 246/503 (48%), Gaps = 27/503 (5%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           +R  R R  P  I +  +L  L KTK       + + M   GI+      + L+ +Y   
Sbjct: 38  NRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHL 97

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
            ++ +A  V + + K    P+++   T I  L +  ++ ++L F +R+   GI  + ++Y
Sbjct: 98  RQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSY 157

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             LI G C + +   A++L+ ++  + C PD V Y T++  LCK+K +++  DL  +M  
Sbjct: 158 GTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMF- 216

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                  + R+                P+VVTYT+++ GFC VG+LD+A  +L +M    
Sbjct: 217 -------EKRV---------------FPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKN 254

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PN  ++   ++GLC  GK  EA+ ++    +E   P+  TY+ +M G     +  +A 
Sbjct: 255 VNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAK 314

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           +V   M + G        +++I  L +   +D A    +   N+    +VV ++SLI G 
Sbjct: 315 NVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGL 374

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ G +  AL  +D+M+   + P+ +TYT++IDAL K+ +V++A  L+ K+  +G+   +
Sbjct: 375 CKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANM 434

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGK 607
            TY  ++   C+ GR+ D  K+ + +L K        Y+ +I  LC     +EA  +L K
Sbjct: 435 YTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSK 494

Query: 608 VLRTASKADASTCHVLVESYLNK 630
           +       DA     ++ ++  K
Sbjct: 495 MEDKGCVPDAIAYETIINAFFEK 517



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 133/531 (25%), Positives = 245/531 (46%), Gaps = 70/531 (13%)

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           L +A+   + M +    P ++     +  LV        +   +RM+L GI  N +T N 
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI  YC L +I  A  +  ++   G  PD ++Y T++  LC   ++KE  +         
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLN--------- 140

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
             FHD+        LV+Q    G   D V+Y  ++NG C++G+   A ++L+++    C+
Sbjct: 141 --FHDR--------LVSQ----GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICR 186

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+ V Y   ++GLC +    +A ++     E+   PN +TY+ +++G    G+L +A  +
Sbjct: 187 PDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGL 246

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF-- 489
           + EMV K   P     N L+  LC+EGKM  AK  +   + +G   +V  + +L+ G+  
Sbjct: 247 LNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFL 306

Query: 490 --------------CQKGD-------------------LEEALSLLDDMYLCKKDPDTVT 516
                          Q G                    L+EA+ L + M      PD V 
Sbjct: 307 VKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVA 366

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y+++ID L K+GR+  A + + +M  +G  P V+TY ++I   C+  +V+  + LL+K+ 
Sbjct: 367 YSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIK 426

Query: 577 SK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV-----ESYLN 629
            +  Q     YN +++ LC  G L +A K+   +L      D  T  +++     ES  +
Sbjct: 427 DQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFD 486

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
           + + LL+     +M ++  +PD    + +      +  +++A+ L+   ++
Sbjct: 487 EALTLLS-----KMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 200/392 (51%), Gaps = 19/392 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  ++  L K      A R+LR +   G  CRP+   Y  ++    +   +R+A  
Sbjct: 153 DHVSYGTLINGLCKIGQTGPALRLLRKI--EGEICRPDVVMYNTIIDGLCKDKLVRDAFD 210

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  V PN++   + I+   +  +L KA   L  M L  + PNV T+N L+ G C
Sbjct: 211 LYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLC 270

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GY-LCKEK-RIKEVRDLMEKMVNDSNL- 313
              ++++A  L+  M  +G  PD  +Y  +M GY L KE  + K V ++M +M    ++ 
Sbjct: 271 KEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVH 330

Query: 314 --------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                         ++EA +L   M     IPDVV Y+++++G C+ G ++ A K + +M
Sbjct: 331 SYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEM 390

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
           +  G  PN ++YT+ ++ LC + +  +A  ++   +++    N  TY++++ GL ++G+L
Sbjct: 391 HDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRL 450

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
           ++A  V ++++ KG     V  +++I  LC+E   D A   + +  +KGC  + + + ++
Sbjct: 451 TDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETI 510

Query: 486 IRGFCQKGDLEEALSLLDDMYLC---KKDPDT 514
           I  F +K   ++A  LL +M  C   K + DT
Sbjct: 511 INAFFEKDMNDKAEKLLREMIDCVDYKDNGDT 542



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 121/499 (24%), Positives = 216/499 (43%), Gaps = 56/499 (11%)

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLH---RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
           R +   I PN    + L+  +   H    + DAI   + M      P  + +  ++G L 
Sbjct: 5   RFRFHSIIPN----STLLLSHTHFHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLV 60

Query: 293 KEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
           K K    V  L ++M                N +    +I  A  +  ++ ++G  PD++
Sbjct: 61  KTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDII 120

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TYT ++ G C  G++ ++     ++   G K + VSY   +NGLC  G++  A  ++   
Sbjct: 121 TYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKI 180

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           E E   P+ + Y+ ++ GL ++  + +A D+  EM +K  FP  V    LI   C  G++
Sbjct: 181 EGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQL 240

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D A   + E + K    NV  F +L+ G C++G + EA SL+  M      PD  TY  +
Sbjct: 241 DKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNAL 300

Query: 521 ID-----------------------------------ALSKNGRVEEATELMMKMLSKGL 545
           +D                                    LSK   ++EA +L   M ++ +
Sbjct: 301 MDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENV 360

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGK 603
           +P VV Y ++I   C+ GR+   LK +++M  + +      Y  +I+ LC    +++A  
Sbjct: 361 IPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIA 420

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           +L K+     +A+  T ++LV+     G    A KV   +  +    D+     +   L 
Sbjct: 421 LLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLC 480

Query: 664 LEGKSEEADTLMLRFVERG 682
            E   +EA TL+ +  ++G
Sbjct: 481 KESLFDEALTLLSKMEDKG 499


>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
 gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 147/617 (23%), Positives = 286/617 (46%), Gaps = 41/617 (6%)

Query: 81  VCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHD 140
           + RLI  +  WS +LE  L +L  S+       VLR  A    A +FF WA R   + HD
Sbjct: 1   MARLINSK-PWSTELESSLFSLSPSISKTTFFQVLRFIASPPKAFEFFNWASRNG-FAHD 58

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRG---IECRPEAFSYLMVAYSRAGKLRNAMY 197
              Y+MML+IL +      A+  L  + RR    ++      + L+ +Y  AG    A+ 
Sbjct: 59  SRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIK 118

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM-QLAGITPNVLTYNCLIKGY 256
           + S+M+ + V+P+++  N+ + +L+   +   A    + M    G+TP+  T+N LI+G+
Sbjct: 119 LFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGF 178

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C    + +  +   EM    C PD V+Y T++  LC+  +++   ++++ MV        
Sbjct: 179 CKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMV-------- 230

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
               ++ K+L          PDVVTYT +V G+C   E+D+A  + ++M   G KPN ++
Sbjct: 231 ----KKMKDLS---------PDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDIT 277

Query: 377 YTAFLNGLCHNGKSLEAREMINTS-EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           Y   + GLC   K  + +E++  +     + P+  TY+ +M+     G   EA  + ++M
Sbjct: 278 YNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKM 337

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK-------GCAVNVVNFTSLIRG 488
            +    P     ++LI++LC+ G  + A++   +  ++       GC   V  +  +   
Sbjct: 338 KELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDF 397

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C+ G   +A  +   + + K   D  +Y T+I    K G  E   +L++ ML +  VP 
Sbjct: 398 LCKNGKTHKAERVFRQL-MKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPD 456

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILG 606
             TY  +I+ + Q G      K LE+ML        + ++ ++  L    +  E+   + 
Sbjct: 457 FETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASFVV 516

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
            ++    + + +     +      G+ + A+++   +++   + D+   +++   +   G
Sbjct: 517 LMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNGYMVDM---EELIGFICQNG 573

Query: 667 KSEEADTLMLRFVERGH 683
           K  +A  ++   +E+GH
Sbjct: 574 KLLDAQKMLSFCLEKGH 590



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 108/480 (22%), Positives = 189/480 (39%), Gaps = 62/480 (12%)

Query: 117 SQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP 176
           S  DE    +FF    R +    D + Y  +++ L +    + A  V++ M ++  +  P
Sbjct: 182 SMVDE--GFRFFKEMSR-FNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSP 238

Query: 177 EAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL------------- 221
           +  +Y  L+  Y    ++  A+ V   M    + PN +  NT I  L             
Sbjct: 239 DVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEIL 298

Query: 222 --VVGNK---------------------LAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
              VG +                       +AL+  ++M+   + P+  TY+ LI+  C 
Sbjct: 299 GGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQ 358

Query: 259 LHRIKDAIKLIDEMPLK-------GCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKM 307
               + A +L D++  +       GC+P   +Y  +  +LCK  +  +     R LM+K 
Sbjct: 359 RGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKG 418

Query: 308 VNDSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
             D   +         +G  E   +L+  M +   +PD  TY  ++NGF + GE   A K
Sbjct: 419 TQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYK 478

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
            L++M      P T  + + L+ L  N  + E+   +    +     N    +  M  L 
Sbjct: 479 TLERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLF 538

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
             G   +A  +V  +   G+    V++  LI  +C+ GK+  A+K +  CL KG  V++ 
Sbjct: 539 GSGLRIKAFQIVELLYDNGYM---VDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDIN 595

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
               +I G C+     EA  L   +              +  AL   GR EEA  +  +M
Sbjct: 596 VCNVVIEGLCKMKRPLEAFGLYYMLVEKSNHQQLSCLEGLRTALEAGGRSEEAKFVSKRM 655


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 161/643 (25%), Positives = 283/643 (44%), Gaps = 94/643 (14%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA-DERVALQFFYWADRQW 135
           LV++  R+I+  + W   LE  +R      +  +I   +  Q  D R+ L FF WA +Q 
Sbjct: 31  LVKDTIRIIKTETLWQEALE--IRFSETDTRVSEIAHFVFDQIHDPRLGLNFFEWASKQS 88

Query: 136 RYRH--DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
              +  D  V   +L++L++ ++ +  + +L  M  + +    EA S+++ AY+ +G ++
Sbjct: 89  TLSNSLDGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVK 148

Query: 194 NAMYVL-SMMQKAAVAPNLLICNTAIHVLV---------------------VGN------ 225
            A+ +  +++      P++  CN+ +++LV                     V N      
Sbjct: 149 EALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIV 208

Query: 226 --------KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
                   K+ +    +E+    G  PN++ YN LI GYC    I+ A  L  E+ +KG 
Sbjct: 209 TKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGF 268

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------------VNDSNLFHDQGRIEEA 323
            P   +Y  ++   CK+ + + V  L+ +M              + D+   H  G   EA
Sbjct: 269 LPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKH--GCEIEA 326

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
            + V  M + GC PD+ TY  ++NG C  G++ +A+++L+     G  PN  SYT  ++ 
Sbjct: 327 ADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHA 386

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
              NG+ + A E++    E   T + I Y  ++HGL   G++  A  V  +M+++G  P 
Sbjct: 387 FSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPD 446

Query: 444 PVEINLLIQSLC-----------------------------------REGKMDGAKKFMQ 468
               N+L+  LC                                   R G +D AKK  Q
Sbjct: 447 ANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQ 506

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
             + +G   +VV   ++I+G+C+ G + +AL     M+     PD  TY+TIID   K  
Sbjct: 507 LTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQN 566

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS--KQKCRTAYN 586
            +  A  +   ML K   P VVT+ ++I+ +C+ G +    K+ E+M S   +     Y 
Sbjct: 567 DLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYT 626

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
            +I   C  G L +A     ++L      + +T + LV    N
Sbjct: 627 ILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTN 669



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 220/492 (44%), Gaps = 33/492 (6%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  M+    K    +   ++L  M  RG+    + F+ ++ A  + G    A   +  M
Sbjct: 274 TYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWM 333

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            ++   P++   NT I+      K+ +A   LE     G+ PN  +Y  LI  +      
Sbjct: 334 IESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEY 393

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK---EVRD-LMEK-MVNDSNLFH-- 315
             A +L+ EM  +G + D ++Y  ++  L     +     VRD +ME+ ++ D+N+++  
Sbjct: 394 VRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVL 453

Query: 316 -----DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                 +GR   AK+L+ +M      PD      +V+GF R G LD+AKK+ Q     G 
Sbjct: 454 MSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGI 513

Query: 371 KPNTVSYTAFLNGLCHNGKSLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             + V   A + G C  G   +A    + M N       +P+  TYS ++ G  ++  L 
Sbjct: 514 DTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVH----SPDEFTYSTIIDGYVKQNDLR 569

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
            A  +   M+KK   P  V    LI   CR G ++ A+K  +E  + G   NVV +T LI
Sbjct: 570 GALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILI 629

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT-----------E 535
             FC++G L +A    + M + K  P+  T+  +++ L+ N  +  ++           E
Sbjct: 630 GYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLE 689

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
               M+S G    +  Y +++   CQ   V+  L+L +KM+SK       ++  ++  LC
Sbjct: 690 FFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLC 749

Query: 594 SFGYLEEAGKIL 605
             G L++   ++
Sbjct: 750 LEGRLQDWNNVI 761



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 198/446 (44%), Gaps = 27/446 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A+ +L    RRG+   P  FSY  L+ A+S+ G+   A  +L  M +     +L+     
Sbjct: 361 AEELLEHAIRRGL--FPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGAL 418

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +H LVV  ++  AL   ++M   GI P+   YN L+ G C   R   A +L+ EM  +  
Sbjct: 419 VHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNV 478

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDL----MEKMVNDSNL--------FHDQGRIEEAKE 325
           +PD     T++    +   + E + L    +E+ ++ S +        +   G + +A  
Sbjct: 479 TPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALL 538

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
              +M      PD  TY+ +++G+ +  +L  A +M   M    CKPN V++T+ +NG C
Sbjct: 539 CFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFC 598

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            NG    A ++        + PN +TY++++    +EGKL++AC    +M+     P   
Sbjct: 599 RNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDA 658

Query: 446 EINLLIQSLCREGKMDGAKK-----------FMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
             N L+  L     +  + K           F    ++ G    +  + S++   CQ   
Sbjct: 659 TFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKM 718

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           ++ AL L D M      PD V++  ++  L   GR+++   ++    ++  +   V Y  
Sbjct: 719 VKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVIPCNFNERQLQIAVKYSE 778

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQK 580
            + ++   G   D   LL+ ++ K K
Sbjct: 779 KLDQFLSEGLTSDASLLLQTLVEKFK 804



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 187/412 (45%), Gaps = 15/412 (3%)

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQM 333
           +++  L + +  KE+ +L+E M +              + +   G ++EA EL N +  +
Sbjct: 101 SLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDV 160

Query: 334 -GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
             C+PDV    +++N     G+++ A+K+  +M       +  +      GLC  GK  E
Sbjct: 161 HNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEE 220

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
            R +I     +   PN + Y+ ++ G  + G +  A  + +E+  KGF PT      +I 
Sbjct: 221 GRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMIN 280

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           + C++GK +   K + E   +G AV++  F  +I    + G   EA   +  M     +P
Sbjct: 281 AFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEP 340

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D  TY T+I+     G+V EA EL+   + +GL P   +Y  +IH + + G      +LL
Sbjct: 341 DMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELL 400

Query: 573 EKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
            +M  +       AY  ++  L   G ++ A  +  K++      DA+  +VL+     K
Sbjct: 401 IEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKK 460

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           G    A ++   M ++N+ PD  +   + +  I  G  +EA  L    +ERG
Sbjct: 461 GRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERG 512



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/334 (23%), Positives = 149/334 (44%), Gaps = 38/334 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF--SYLMVAYSRAGKLRNAMY 197
           D  +Y +++  L K      AK++L  M  + +   P+AF  + L+  + R G L  A  
Sbjct: 446 DANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVT--PDAFVNATLVDGFIRHGNLDEAKK 503

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +  +  +  +  +++ CN  I        +  AL   +RM     +P+  TY+ +I GY 
Sbjct: 504 LFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYV 563

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
             + ++ A+++   M  K C P+ V++ +++   C+                        
Sbjct: 564 KQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCR-----------------------N 600

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G +  A+++  +M   G  P+VVTYT ++  FC+ G+L +A    +QM  + C PN  ++
Sbjct: 601 GDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATF 660

Query: 378 TAFLNGLC-HNGKSLEAR----------EMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
              +NGL  +NG ++ ++          E       + W      Y+ ++  L +   + 
Sbjct: 661 NYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVK 720

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
            A  +  +M+ KGF P PV    L+  LC EG++
Sbjct: 721 PALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRL 754


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 157/627 (25%), Positives = 272/627 (43%), Gaps = 52/627 (8%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGI 172
             L+S +D   AL +F    +     H P     MLE L      +    V  LM ++ I
Sbjct: 94  GALKSISDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVI 153

Query: 173 ECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
              P  +  +  A S  G +R A + L  M++A    N    N  I+ L+      +AL+
Sbjct: 154 NRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALK 213

Query: 233 -----------------------------------FLERMQLAGITPNVLTYNCLIKGYC 257
                                               LE M+  G+ PN+ TY   I+   
Sbjct: 214 VYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLG 273

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL---- 313
              RI DA  ++  M  +GC PD V+Y  ++  LC   ++ + ++L  KM   S+     
Sbjct: 274 RAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLV 333

Query: 314 --------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                   F + G +E  K   ++M   G  PDVVTYT +V   C+ G++DQA  ML  M
Sbjct: 334 TYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVM 393

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  PN  +Y   ++GL +  +  EA E+ N  E     P A +Y + +    + G  
Sbjct: 394 RVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDP 453

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A D   +M K+G  P+    N  + SL   G++  AK    +  N G + + V +  +
Sbjct: 454 EKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMM 513

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           ++ + + G +++A  LL +M     +PD +   ++ID L K GRV+EA ++  ++    L
Sbjct: 514 MKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKL 573

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAG 602
            PTVVTY  +I    + G++   L L   M  +  C      +N +++ LC    ++ A 
Sbjct: 574 APTVVTYNILITGLGKEGKLLKALDLFGSM-KESGCPPNTVTFNALLDCLCKNDAVDLAL 632

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           K+  ++       D  T + ++   + +G    A+    +M  + L PD      +   +
Sbjct: 633 KMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGV 691

Query: 663 ILEGKSEEADTLMLRFVERGHIQPKSE 689
           + +G+ E+A  +++ FV +  +Q  ++
Sbjct: 692 VKDGRVEDAIKIVMEFVHQSGLQTSNQ 718



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 121/517 (23%), Positives = 226/517 (43%), Gaps = 52/517 (10%)

Query: 178  AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
             ++ L+    + GKL  A+ +   M+++   PN +  N  +  L   + +  AL+   RM
Sbjct: 579  TYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRM 638

Query: 238  QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
             +   +P+VLTYN +I G     R   A     +M  K  SPD V+ YT++  + K+ R+
Sbjct: 639  TIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPDHVTLYTLLPGVVKDGRV 697

Query: 298  KEVRDLMEKMVNDSNLFHD-------------QGRIEEA--------------------- 323
            ++   ++ + V+ S L                +  IEEA                     
Sbjct: 698  EDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILP 757

Query: 324  --------------KELVNQMSQ-MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                          K+L ++ ++ +G  P   +Y  +++G       + A K+  +M + 
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817

Query: 369  GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
            GC PN  +Y   L+    + +  E  E+ N        PN IT+++++  L +   +++A
Sbjct: 818  GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877

Query: 429  CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             D+  E++   F PTP     LI  L + G+ + A K  +E  +  C  N   +  LI G
Sbjct: 878  LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILING 937

Query: 489  FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            F + G++  A  L   M      PD  +YT +++ L   GRV++A     ++   GL P 
Sbjct: 938  FGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPD 997

Query: 549  VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILG 606
             V+Y  +I+   +  R+E+ L L  +M ++        YN +I +  + G +++AGK+  
Sbjct: 998  TVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFE 1057

Query: 607  KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            ++     + +  T + L+  +   G    A+ V  +M
Sbjct: 1058 ELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKM 1094



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/467 (23%), Positives = 206/467 (44%), Gaps = 45/467 (9%)

Query: 122  RVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGA-KRVLRLMARRGIECRPEAFS 180
            R    F+++   +     D +  Y +L  + K    + A K V+  + + G++   + + 
Sbjct: 662  RAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVW- 720

Query: 181  YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA----------IHVLVVGNKLAKA 230
                     G+L   + + + +++A      L+CN+           I VL    K   A
Sbjct: 721  ---------GELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDA 771

Query: 231  LRFLERMQLA-GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
             +  ++   + G  P   +YNCL+ G    +  + A+KL  EM   GC P+  +Y  ++ 
Sbjct: 772  KKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLD 831

Query: 290  YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
               K KRI E             LF          EL N+M   GC P+++T+  +++  
Sbjct: 832  AHGKSKRIDE-------------LF----------ELYNEMLCRGCKPNIITHNIIISAL 868

Query: 350  CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
             +   +++A  +  ++      P   +Y   + GL   G+S EA ++     +    PN 
Sbjct: 869  VKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNC 928

Query: 410  ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
              Y+++++G  + G ++ ACD+ + M+K+G  P      +L++ L   G++D A  + +E
Sbjct: 929  AIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEE 988

Query: 470  CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
                G   + V++  +I G  +   LEEALSL  +M      P+  TY  +I      G 
Sbjct: 989  LKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGM 1048

Query: 530  VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
            V++A ++  ++   GL P V TY  +I  + + G  +    + +KM+
Sbjct: 1049 VDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMM 1095



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 142/308 (46%), Gaps = 12/308 (3%)

Query: 225  NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            N    AL+    M+ AG  PN+ TYN L+  +    RI +  +L +EM  +GC P+ +++
Sbjct: 802  NITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITH 861

Query: 285  YTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
              ++  L K   I +  DL  ++++                    GR EEA ++  +M  
Sbjct: 862  NIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPD 921

Query: 333  MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
              C P+   Y  ++NGF + G ++ A  + ++M   G +P+  SYT  +  L   G+  +
Sbjct: 922  YQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDD 981

Query: 393  AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
            A       +     P+ ++Y+++++GL +  +L EA  +  EM  +G  P     N LI 
Sbjct: 982  AVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALIL 1041

Query: 453  SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
                 G +D A K  +E    G   NV  + +LIRG  + G+ + A S+   M +    P
Sbjct: 1042 HFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSP 1101

Query: 513  DTVTYTTI 520
            +  T+  +
Sbjct: 1102 NAGTFAQL 1109



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 12/219 (5%)

Query: 176  PEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
            P  +  L+    +AG+   AM +   M      PN  I N  I+       +  A    +
Sbjct: 893  PCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFK 952

Query: 236  RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            RM   GI P++ +Y  L++      R+ DA+   +E+ L G  PD VSY  ++  L K +
Sbjct: 953  RMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSR 1012

Query: 296  RIKEVRDLMEKMVN----------DSNLFH--DQGRIEEAKELVNQMSQMGCIPDVVTYT 343
            R++E   L  +M N          ++ + H  + G +++A ++  ++  MG  P+V TY 
Sbjct: 1013 RLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYN 1072

Query: 344  AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
            A++ G  + G  D+A  + ++M   GC PN  ++    N
Sbjct: 1073 ALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 224/441 (50%), Gaps = 22/441 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ A  +  K    + +   M+   +  +L   N  I+      +++ AL  L +M 
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+ +T   L+ G+C  +R+ DA+ L+D+M   G  PD V+Y  ++  LCK KR+ 
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207

Query: 299 EVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           +  D  +++                N   +  R  +A  L++ M +    P+V+TY+A++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           + F + G++ +AK++ ++M      P+ V+Y++ +NGLC + +  EA +M +    +   
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            + ++Y+ +++G  +  ++ +   + REM ++G     V  N LIQ   + G +D A++F
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
             +    G + ++  +  L+ G C  G+LE+AL + +DM   + D D VTYTT+I  + K
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----LSKQKCR 582
            G+VEEA  L   +  KGL P +VTY T++   C  G + ++  L  KM    L K  C 
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507

Query: 583 ------TAYNQVIENLCSFGY 597
                 T   ++I+ + S GY
Sbjct: 508 LSDGDITLSAELIKKMLSCGY 528



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 222/447 (49%), Gaps = 25/447 (5%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R  KL +A+ + S M K+   P+++  N  +  +V   K    +   ++M++ GI  ++ 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           T+N +I  +C   ++  A+ ++ +M   G  PD+V+  +++   C+              
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR-------------- 167

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    + R+ +A  LV++M ++G  PD+V Y A+++  C+   ++ A    +++  
Sbjct: 168 ---------RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G +PN V+YTA +NGLC++ +  +A  +++   ++  TPN ITYS ++    + GK+ E
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A ++  EMV+    P  V  + L+  LC   ++D A +     ++KGC  +VV++ +LI 
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC+   +E+ + L  +M       +TVTY T+I    + G V++A E   +M   G+ P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKIL 605
            + TY  ++   C  G +E  L + E M  ++       Y  VI  +C  G +EEA  + 
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458

Query: 606 GKVLRTASKADASTCHVLVESYLNKGI 632
             +     K D  T   ++     KG+
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGL 485



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 198/418 (47%), Gaps = 31/418 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +L  M + G E        L+  + R  ++ +A+ ++  M +    P+++  N  I 
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    ++  A  F + ++  GI PNV+TY  L+ G C+  R  DA +L+ +M  K  +P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           + ++Y  ++                       + F   G++ EAKEL  +M +M   PD+
Sbjct: 259 NVITYSALL-----------------------DAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           VTY+++VNG C    +D+A +M   M   GC  + VSY   +NG C   +  +  ++   
Sbjct: 296 VTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             +     N +TY+ ++ G  + G + +A +   +M   G  P     N+L+  LC  G+
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           ++ A    ++   +   +++V +T++IRG C+ G +EEA SL   + L    PD VTYTT
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           ++  L   G + E   L  KM  +GL+    T           G +    +L++KMLS
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLS 525



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 203/439 (46%), Gaps = 14/439 (3%)

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----ND----- 310
           ++ DAI L  +M      P  V +  ++  + K K+   V  L +KM      ND     
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 311 --SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
              N F    ++  A  ++ +M ++G  PD VT  ++VNGFCR   +  A  ++ +M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G KP+ V+Y A ++ LC   +  +A +     E +   PN +TY+ +++GL    + S+A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             ++ +M+KK   P  +  + L+ +  + GK+  AK+  +E +      ++V ++SL+ G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C    ++EA  + D M       D V+Y T+I+   K  RVE+  +L  +M  +GLV  
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILG 606
            VTY T+I  + Q G V+   +   +M           YN ++  LC  G LE+A  I  
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
            + +     D  T   ++      G    A+ + C +  + L PD+     +   L  +G
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484

Query: 667 KSEEADTLMLRFVERGHIQ 685
              E + L  +  + G ++
Sbjct: 485 LLHEVEALYTKMKQEGLMK 503



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 156/324 (48%), Gaps = 27/324 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y+ D + Y  +++ L KTK    A    + + R+GI  RP   +Y  L+     + +  +
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI--RPNVVTYTALVNGLCNSSRWSD 243

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +LS M K  + PN++  +  +   V   K+ +A    E M    I P+++TY+ L+ 
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVN 303

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G C   RI +A ++ D M  KGC  D VSY T++   CK K                   
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK------------------- 344

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
               R+E+  +L  +MSQ G + + VTY  ++ GF + G++D+A++   QM   G  P+ 
Sbjct: 345 ----RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +Y   L GLC NG+  +A  +    ++     + +TY+ V+ G+ + GK+ EA  +   
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460

Query: 435 MVKKGFFPTPVEINLLIQSLCREG 458
           +  KG  P  V    ++  LC +G
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKG 484



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 124/264 (46%), Gaps = 2/264 (0%)

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           R+ KL++A D+  +MVK   FP+ V+ N L+ ++ +  K D      ++    G   ++ 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            F  +I  FC    +  ALS+L  M     +PD VT  ++++   +  RV +A  L+ KM
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYL 598
           +  G  P +V Y  +I   C+  RV D     +++  K  +     Y  ++  LC+    
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
            +A ++L  +++     +  T   L+++++  G  L A ++   M   ++ PD+     +
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 659 SERLILEGKSEEADTLMLRFVERG 682
              L L  + +EA+ +    V +G
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKG 325


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 228/446 (51%), Gaps = 24/446 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
             Y +M++ L K    + A+ +   M   G       ++ L+  + + G L   + +   
Sbjct: 57  FTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQ 116

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+ A   P+++  N  I+      ++ KA  FL  M+  G+ PNV+TY+  I  +C    
Sbjct: 117 MKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 176

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH------ 315
           +++AIK   +M     +P++ +Y +++   CK   + E   L+E+++      +      
Sbjct: 177 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 236

Query: 316 ------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                 ++GR++EA+E+   M   G  P+  TYTA+V+GF +  E++ AK +L++M    
Sbjct: 237 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 296

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            KP+ + Y   L GLC+  +  EA+ +I   +E     NA+ Y+ +M    + G+ +EA 
Sbjct: 297 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 356

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            ++ EM+             L+  LC+    + AKK   E L+KG   + + +T+LI G 
Sbjct: 357 TLLEEMLD------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGN 404

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
            + G+L+EAL+L D M     + D   YT +I  LS +G+V++A  L+ +M+ KG++P  
Sbjct: 405 MKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDE 464

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKM 575
           V Y  +I +Y  +G+V++ L+L  +M
Sbjct: 465 VVYMCLIKKYYALGKVDEALELQNEM 490



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 235/492 (47%), Gaps = 26/492 (5%)

Query: 175 RPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
           +P + + L+   S+ G+   +      M  A +  ++   N  I  L     L  A    
Sbjct: 20  KPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLF 79

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
            +M+ AG TP+++TYN LI G+  L  + + I + ++M    C PD ++Y  ++   CK 
Sbjct: 80  TQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKF 139

Query: 295 KRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           +R+ +  + + +M  +             + F  +G ++EA +    M ++   P+  TY
Sbjct: 140 ERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTY 199

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           T++++  C+ G L +A K+++++   G K N V+YTA L+GLC  G+  EA E+      
Sbjct: 200 TSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN 259

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               PN  TY+ ++HG  +  ++  A D+++EM +K   P  +    ++  LC E +++ 
Sbjct: 260 AGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEE 319

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           AK  + E    G   N V +T+L+  + + G   EAL+LL++M              ++D
Sbjct: 320 AKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML------------DLVD 367

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQK 580
            L KN   E A +L  +ML KG++P  + Y  +I    + G +++ L L ++M  +  + 
Sbjct: 368 GLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMEL 427

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
              AY  +I  L   G +++A  +L +++      D      L++ Y   G    A ++ 
Sbjct: 428 DLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQ 487

Query: 641 CRMFNRNLIPDL 652
             M  R +I  L
Sbjct: 488 NEMAKRGMITGL 499



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/513 (26%), Positives = 229/513 (44%), Gaps = 48/513 (9%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+K  V P    CN  +H L    +   + +F + M  AGI  +V TYN +I   C    
Sbjct: 12  MRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGD 71

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           ++ A  L  +M   G +PD V+Y +++             D   K+          G ++
Sbjct: 72  LEMARSLFTQMKEAGFTPDIVTYNSLI-------------DGHGKL----------GLLD 108

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           E   +  QM    C PDV+TY A++N FC+   + +A + L +M  +G KPN V+Y+ F+
Sbjct: 109 ECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFI 168

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +  C  G   EA +          TPN  TY+ ++    + G L+EA  +V E+++ G  
Sbjct: 169 DAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIK 228

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
              V    L+  LC EG+M  A++  +  LN G A N   +T+L+ GF +  ++E A  +
Sbjct: 229 LNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDI 288

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L +M      PD + Y TI+  L    R+EEA  L+ ++   G+    V Y T++  Y +
Sbjct: 289 LKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFK 348

Query: 562 VGRVEDLLKLLEKMLS------KQKC-------------------RTAYNQVIENLCSFG 596
            G+  + L LLE+ML       K  C                   + AY  +I+     G
Sbjct: 349 SGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHG 408

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            L+EA  +  +++    + D      L+    + G    A  +   M  + ++PD  +  
Sbjct: 409 NLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYM 468

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
            + ++    GK +EA  L     +RG I   S+
Sbjct: 469 CLIKKYYALGKVDEALELQNEMAKRGMITGLSD 501



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 179/378 (47%), Gaps = 24/378 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  ++    K +    A   L  M   G++     +S  + A+ + G L+ A+   
Sbjct: 125 DVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFF 184

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++ A+ PN     + I        LA+AL+ +E +  AGI  NV+TY  L+ G C+ 
Sbjct: 185 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 244

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM----EKMVNDSNLFH 315
            R+K+A ++   M   G +P++ +Y  ++    K K ++  +D++    EK +    L +
Sbjct: 245 GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLY 304

Query: 316 --------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                   ++ R+EEAK L+ ++ + G   + V YT +++ + + G+  +A  +L++M  
Sbjct: 305 GTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD 364

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
                        ++GLC N     A+++ +   ++   P+ I Y+ ++ G  + G L E
Sbjct: 365 ------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQE 412

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A ++   M++ G          LI  L   G++  A+  + E + KG   + V +  LI+
Sbjct: 413 ALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK 472

Query: 488 GFCQKGDLEEALSLLDDM 505
            +   G ++EAL L ++M
Sbjct: 473 KYYALGKVDEALELQNEM 490



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 64/130 (49%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +++ L K    + AK++   M  +G+     A++ L+    + G L+ A+ +   M +  
Sbjct: 365 LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 424

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           +  +L      I  L    ++ KA   L+ M   G+ P+ + Y CLIK Y  L ++ +A+
Sbjct: 425 MELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEAL 484

Query: 267 KLIDEMPLKG 276
           +L +EM  +G
Sbjct: 485 ELQNEMAKRG 494


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 214/447 (47%), Gaps = 18/447 (4%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMYVLSMMQK 204
           +L  ++KTK       + R M   GI   P+ ++  +V  S     ++  A   L+ + K
Sbjct: 51  LLTSIAKTKHHSTLLSLSRQMDSFGIP--PDVYTLAIVINSLCHLNRVDFAFSALAKILK 108

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
               P+     T I  L V  K+ +AL   ++M   G  PNV+TY  LI G C   ++ +
Sbjct: 109 LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTE 168

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------- 316
           A  +  EM  KG SP+ V+Y +++  LCK    K V  LM +MV DS +  D        
Sbjct: 169 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV-DSKIMPDVFTLNTVV 227

Query: 317 -----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                +G + EA ++V+ M   G  P+VVTY A+++G C   E+D A K+   M H  C 
Sbjct: 228 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 287

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            N +SY   +NG C      +A  +      +  TPN +TY+ ++HGL   G+L +A  +
Sbjct: 288 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 347

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             EMV +G  P  V    L   LC+   +D A   ++         ++  +T+++ G C+
Sbjct: 348 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 407

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G+LE+A  L  ++      P+  TY  +I  L K G + EA++L  +M   G  P   T
Sbjct: 408 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 467

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           Y  +   + +       ++LLE+ML++
Sbjct: 468 YNLITRGFLRNNEALRTIELLEEMLAR 494



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 235/481 (48%), Gaps = 20/481 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ + ++       + +   M    + P++      I+ L   N++  A   L ++ 
Sbjct: 48  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 107

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+  T+  LI+G C   +I +A+ L D+M  +G  P+ V+Y T++  LCK++++ 
Sbjct: 108 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVT 167

Query: 299 EVRDLMEKMVND---------SNLFHDQGRIEEAKE---LVNQMSQMGCIPDVVTYTAVV 346
           E  ++  +M+           ++L H   ++ E K    L+N+M     +PDV T   VV
Sbjct: 168 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 227

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C+ G + +A  ++  M H G +PN V+Y A ++G C   +   A ++ +T   +   
Sbjct: 228 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 287

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            N I+Y+ +++G  +   + +A  +  EM ++   P  V  N LI  LC  G++  A   
Sbjct: 288 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 347

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
             E + +G   ++V + +L    C+   L++A++LL  +     DPD   YTTI+D + +
Sbjct: 348 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 407

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN 586
            G +E+A +L   + SKGL P V TY  +IH  C+ G + +  KL  +M +K  C  + N
Sbjct: 408 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM-NKNGC--SPN 464

Query: 587 QVIENLCSFGYLEE-----AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
               NL + G+L         ++L ++L      D ST  +LV    + G+     ++ C
Sbjct: 465 DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILC 524

Query: 642 R 642
           +
Sbjct: 525 K 525



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 206/419 (49%), Gaps = 26/419 (6%)

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           L    +M   GI P+V T   +I   C L+R+  A   + ++   G  PD  ++ T++  
Sbjct: 65  LSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRG 124

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LC E +I E   L +KM+ +                       G  P+VVTY  ++NG C
Sbjct: 125 LCVEGKIGEALHLFDKMIGE-----------------------GFQPNVVTYGTLINGLC 161

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +  ++ +A  +  +M   G  PN V+Y + ++GLC   +      ++N   +    P+  
Sbjct: 162 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVF 221

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           T + V+  L +EG ++EA DVV  M+ +G  P  V  N L+   C   ++D A K     
Sbjct: 222 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 281

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           ++K C  NV+++ +LI G+C+   +++A+ L ++M   +  P+TVTY T+I  L   GR+
Sbjct: 282 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 341

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQV 588
           ++A  L  +M+++G +P +VTYRT+    C+   ++  + LL+ +           Y  +
Sbjct: 342 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTI 401

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           ++ +C  G LE+A  +   +     + +  T ++++     +G+   A K+   M N+N
Sbjct: 402 LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM-NKN 459



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 139/628 (22%), Positives = 267/628 (42%), Gaps = 82/628 (13%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           ++ + + Y  ++  L K +    A  +   M  +GI      ++ L+    +  + ++  
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +++ M  + + P++   NT +  L     +A+A   ++ M   G+ PNV+TYN L+ G+
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------- 307
           C  + +  A+K+ D M  K C  + +SY T++   CK + + +   L E+M         
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 308 VNDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           V  + L H     GR+++A  L ++M   G IPD+VTY  + +  C+   LD+A  +L+ 
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 385

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           +      P+   YT  L+G+C  G+  +AR++ +    +   PN  TY++++HGL ++G 
Sbjct: 386 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 445

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L+EA  +  EM K G  P     NL+ +   R  +     + ++E L +G +V+V   T 
Sbjct: 446 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTL 505

Query: 485 LIRGFCQKG----------------------------------------------DLEEA 498
           L+      G                                               L++A
Sbjct: 506 LVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDA 565

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           LS  + M      P TV +T ++ +++K         L  +M S G+ P V T   +I+ 
Sbjct: 566 LSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINS 625

Query: 559 YCQVGRVEDLLKLLEKMLS--------------KQKCRT----------AYNQVIENLCS 594
           +C + R+     +L K+L                  C+            YN +I  LC+
Sbjct: 626 FCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCN 685

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
               +    +L +++ +    +      +V++   +G+  +A+ V   M  R + PD+  
Sbjct: 686 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 745

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERG 682
              + +   L  + +EA  +    V +G
Sbjct: 746 YTALMDGHCLRSEMDEAVKVFDTMVHKG 773



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 195/425 (45%), Gaps = 14/425 (3%)

Query: 141 PIVYYMMLEILSKTKL--CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           P VY + + I S   L     A   L  + + G +     F+ L+      GK+  A+++
Sbjct: 78  PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL 137

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
              M      PN++   T I+ L    ++ +A      M   GI+PN++TYN LI G C 
Sbjct: 138 FDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK 197

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
           L   K    L++EM      PD  +  TV+  LCKE  + E  D+++ M++         
Sbjct: 198 LCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 257

Query: 312 -NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            N   D    +  ++ A ++ + M    C+ +V++Y  ++NG+C++  +D+A  + ++M 
Sbjct: 258 YNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMS 317

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                PNTV+Y   ++GLCH G+  +A  + +        P+ +TY  +   L +   L 
Sbjct: 318 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 377

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A  +++ +    + P       ++  +CR G+++ A+       +KG   NV  +  +I
Sbjct: 378 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 437

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C++G L EA  L  +M      P+  TY  I     +N       EL+ +ML++G  
Sbjct: 438 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS 497

Query: 547 PTVVT 551
             V T
Sbjct: 498 VDVST 502



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 169/383 (44%), Gaps = 38/383 (9%)

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           +  L    +M   GI P+V T N LI  +C L R+  A  ++ ++   G  PD V+Y T+
Sbjct: 598 STVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTL 657

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           M  LCK                                    M   G  PD+ TY ++++
Sbjct: 658 MNGLCK------------------------------------MITKGISPDIFTYNSLIH 681

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
             C + E      +L +M +    PN V ++  ++ LC  G    A ++++   +    P
Sbjct: 682 ALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 741

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           + +TY+ +M G     ++ EA  V   MV KG  P     N+LI   C+  +MD A   +
Sbjct: 742 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLL 801

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
           ++   +G   + V + +LI G C  G L+ A++L  +M    + PD VTY  ++D L KN
Sbjct: 802 EQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKN 861

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAY 585
             + EA  L+  +    L   ++ Y   I   C+ G +E    L   + SK  Q     Y
Sbjct: 862 HHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTY 921

Query: 586 NQVIENLCSFGYLEEAGKILGKV 608
           N +I  LC  G L+EA K+  K+
Sbjct: 922 NIMIHGLCKRGLLDEANKLFRKM 944



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 125/552 (22%), Positives = 227/552 (41%), Gaps = 77/552 (13%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
           +Y  +L+ + +    + A+ +   ++ +G++     ++ ++    + G L  A  + S M
Sbjct: 397 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 456

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD---- 258
            K   +PN    N      +  N+  + +  LE M   G + +V T   L+    D    
Sbjct: 457 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLD 516

Query: 259 ------------------------------------------LHRIKDAIKLIDEMPLKG 276
                                                      + + DA+   + M    
Sbjct: 517 QSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMH 576

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------------NLFHDQGRIEE 322
             P  V +  ++  + K K    V  L  +M  DS              N F    R+  
Sbjct: 577 PPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM--DSFGIPPDVYTLNILINSFCHLRRLGY 634

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A  ++ ++ ++G  PDVVTY  ++NG C+             M   G  P+  +Y + ++
Sbjct: 635 AFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIH 681

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
            LC+  +      ++N        PN + +S V+  L +EG ++ A DVV  M+K+G  P
Sbjct: 682 ALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 741

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V    L+   C   +MD A K     ++KGC  NV ++  LI G+CQ   +++A+ LL
Sbjct: 742 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLL 801

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           + M L     DTVTY T+I  L   GR++ A  L  +M++ G +P +VTYR ++   C+ 
Sbjct: 802 EQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKN 861

Query: 563 GRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
             + + + LL+ +           YN  I+ +C  G LE A  +   +     + D  T 
Sbjct: 862 HHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTY 921

Query: 621 HVLVESYLNKGI 632
           ++++     +G+
Sbjct: 922 NIMIHGLCKRGL 933



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 145/305 (47%), Gaps = 27/305 (8%)

Query: 167 MARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           M  +GI   P+ F+Y  L+ A     + ++   +L+ M  + + PN+++ +T +  L   
Sbjct: 664 MITKGIS--PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 721

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             +A A   ++ M   G+ P+V+TY  L+ G+C    + +A+K+ D M  KGC P+  SY
Sbjct: 722 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 781

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
             ++   C+ +R+ +   L+E                       QMS  G I D VTY  
Sbjct: 782 NILINGYCQIQRMDKAMGLLE-----------------------QMSLQGLIADTVTYNT 818

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++G C VG L  A  +  +M   G  P+ V+Y   L+ LC N    EA  ++   E   
Sbjct: 819 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 878

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
              + + Y++ + G+ R G+L  A D+   +  KG  P     N++I  LC+ G +D A 
Sbjct: 879 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 938

Query: 465 KFMQE 469
           K  ++
Sbjct: 939 KLFRK 943



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 124/248 (50%), Gaps = 14/248 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +V+  +++ L K  +   A  V+ +M +RG+E     ++ LM  +    ++  A+ V   
Sbjct: 709 VVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDT 768

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M      PN+   N  I+      ++ KA+  LE+M L G+  + +TYN LI G C + R
Sbjct: 769 MVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGR 828

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD----- 316
           ++ AI L  EM   G  PD V+Y  ++ YLCK   + E   L+ K +  SNL  D     
Sbjct: 829 LQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLL-KAIEGSNLDADILVYN 887

Query: 317 --------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                    G +E A++L + +S  G  PDV TY  +++G C+ G LD+A K+ ++M  +
Sbjct: 888 IAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEN 947

Query: 369 GCKPNTVS 376
               N+ S
Sbjct: 948 DIWSNSTS 955



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 152/319 (47%), Gaps = 11/319 (3%)

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           S+  F +   H     EA    N    +   P+ + ++ ++  + +    S    + R+M
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              G  P    + ++I SLC   ++D A   + + L  G   +   FT+LIRG C +G +
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            EAL L D M      P+ VTY T+I+ L K+ +V EA  +  +M++KG+ P +VTY ++
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTAS 613
           IH  C++   + +  L+ +M+  +     +  N V++ LC  G + EA  ++  ++    
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG--KSEEA 671
           + +  T + L++ +  +    +A KV   M +++ + ++     +S   ++ G  K +  
Sbjct: 252 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV-----ISYNTLINGYCKIQSV 306

Query: 672 DTLMLRFVE--RGHIQPKS 688
           D  M  F E  R  + P +
Sbjct: 307 DKAMYLFEEMSRQELTPNT 325


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 151/575 (26%), Positives = 255/575 (44%), Gaps = 36/575 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMY 197
           D I Y  +++ L +    Q A  +L  M ++   C P   +Y  V +   R G++  A  
Sbjct: 189 DTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACN 248

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  V P+++   + I  L     + KA   L +M   G  PN +TYNC+I GY 
Sbjct: 249 LFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYS 308

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------V 308
              + K+   +  EM  +G  P+ V+  + M  LCK  + KE  +  + M         V
Sbjct: 309 ISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLV 368

Query: 309 NDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             S L H    +G   +   L N M   G + D   +  V++ + + G +D+   +  QM
Sbjct: 369 TYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQM 428

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  P+  +Y   +      G+  +A +  N        P  I Y  ++ G    G L
Sbjct: 429 QEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNL 488

Query: 426 SEACDVVREMVKKGFF-PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
            +A ++V EM+ +G   P  V  N +I SLC+EG++  A       ++ G   +V+ F S
Sbjct: 489 VKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNS 548

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G+   G +E+A  +LD M     +PD V+Y T+ID   +NGR+++   L  +MLSKG
Sbjct: 549 LIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKG 608

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAG 602
           + PT +TY  ++H     GR     K+  +M+        +    ++  LC     +EA 
Sbjct: 609 VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAI 668

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV-----ACRMFNR----NLIPDLK 653
            +  K+     K + +  + ++++          YKV     A  +F+      L+P+  
Sbjct: 669 AMFKKLGAMNVKFNIAIINTMIDAM---------YKVRKREEAKELFDSISATGLVPNAS 719

Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
               + + L+ EG  EEAD  M   +E+    P S
Sbjct: 720 TYGVMIKNLLKEGSVEEADN-MFSLMEKSGCAPSS 753



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/543 (24%), Positives = 235/543 (43%), Gaps = 52/543 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K +    A+ VLR M   G +     ++ ++  YS +G+ +    + 
Sbjct: 261 DVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMF 320

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    + PN++ CN+ +  L    K  +A  F + M   G  PN++TY+ L+ GY   
Sbjct: 321 REMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATE 380

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------ 313
               D + L + M   G   D+  +  V+    K   + E   +  +M     +      
Sbjct: 381 GCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTY 440

Query: 314 ------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                 F   GR+ +A +  NQM  MG  P+ + Y +++ GFC  G L +AK+++ +M  
Sbjct: 441 GIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMS 500

Query: 368 HGC-KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
            G  +PN V + + +N LC  G+ +EA ++ +        P+ IT++ ++ G    GK+ 
Sbjct: 501 RGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIE 560

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD------------------------- 461
           +A  V+  M+  G  P  V  N LI   CR G++D                         
Sbjct: 561 KAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIIL 620

Query: 462 ----------GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
                     GAKK   E +  G  +++     ++ G C+    +EA+++   +      
Sbjct: 621 HGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVK 680

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE---DL 568
            +     T+IDA+ K  + EEA EL   + + GLVP   TY  +I    + G VE   ++
Sbjct: 681 FNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNM 740

Query: 569 LKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
             L+EK       R   N +I  L   G + +AG  + KV       +AST  +L+  + 
Sbjct: 741 FSLMEKSGCAPSSRL-LNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFS 799

Query: 629 NKG 631
            +G
Sbjct: 800 REG 802



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 220/498 (44%), Gaps = 98/498 (19%)

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK--GCSPDKVSYYTVMGY 290
            L RM   G+ P+ ++YN ++K  C+  R + A+ L+  M  K  GCSP+ V+Y TV+  
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           L +E  + +            NLFH             +M Q G +PDVVTYT++++  C
Sbjct: 237 LFREGEVSKA----------CNLFH-------------EMMQQGVVPDVVTYTSIIDALC 273

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG--------------------------- 383
           +   +D+A+ +L+QM  +G +PN V+Y   ++G                           
Sbjct: 274 KARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIV 333

Query: 384 --------LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE------------- 422
                   LC +GKS EA E  ++   +   PN +TYSV++HG   E             
Sbjct: 334 TCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSM 393

Query: 423 ----------------------GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
                                 G + E   +  +M ++G  P      ++I +  R G++
Sbjct: 394 EGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRL 453

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL-CKKDPDTVTYTT 519
             A     + +  G     + + SLI+GFC  G+L +A  L+ +M       P+ V + +
Sbjct: 454 ADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNS 513

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK- 578
           II++L K GRV EA ++   ++  G  P V+T+ ++I  Y  VG++E    +L+ M+S  
Sbjct: 514 IINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAG 573

Query: 579 -QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
            +    +YN +I+  C  G +++   + G++L    K    T  +++    N G  + A 
Sbjct: 574 IEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633

Query: 638 KVACRMFNRNLIPDLKLC 655
           K+   M       D+  C
Sbjct: 634 KMCHEMIESGTTMDISTC 651



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 170/353 (48%), Gaps = 18/353 (5%)

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT--SEEEWWTPNAITYS 413
           D    +L +M   G +P+T+SY   +  LC + +S  A ++++T   +    +PN +TY+
Sbjct: 172 DVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYN 231

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            V+HGL REG++S+AC++  EM+++G  P  V    +I +LC+   MD A+  +++ ++ 
Sbjct: 232 TVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISN 291

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   N V +  +I G+   G  +E   +  +M      P+ VT  + + +L K+G+ +EA
Sbjct: 292 GFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEA 351

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-----LSKQKCRTAYNQV 588
            E    M +KG  P +VTY  ++H Y   G   D+L L   M     ++ Q+    +N V
Sbjct: 352 AEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQR---VFNIV 408

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I+     G ++E   I  ++       DA T  +++ ++   G    A     +M    L
Sbjct: 409 IDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGL 468

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVFLNS 701
            P+  +   + +   + G   +A  L+   + RG  +P          VF NS
Sbjct: 469 KPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNI--------VFFNS 513



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 119/524 (22%), Positives = 206/524 (39%), Gaps = 106/524 (20%)

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P V TYN L+   C   R      L       G   D +    ++  L   KR  +V +L
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC------------- 350
                                 L+++M ++G  PD ++Y  VV   C             
Sbjct: 177 ----------------------LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLH 214

Query: 351 ------------------------RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
                                   R GE+ +A  +  +M   G  P+ V+YT+ ++ LC 
Sbjct: 215 TMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCK 274

Query: 387 ----NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
               +   L  R+MI+      + PN +TY+ ++HG    G+  E   + REM  +G  P
Sbjct: 275 ARAMDKAELVLRQMISNG----FQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMP 330

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V  N  + SLC+ GK   A +F      KG   N+V ++ L+ G+  +G   + L+L 
Sbjct: 331 NIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLF 390

Query: 503 DDM-----------------YLCKKD------------------PDTVTYTTIIDALSKN 527
           + M                    K+                   PD  TY  +I A S+ 
Sbjct: 391 NSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRM 450

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TA 584
           GR+ +A +   +M++ GL P  + Y ++I  +C  G +    +L+ +M+S+   R     
Sbjct: 451 GRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVF 510

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           +N +I +LC  G + EA  I   V+    + D  T + L++ Y   G    A+ V   M 
Sbjct: 511 FNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMI 570

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           +  + PD+     + +     G+ ++   L    + +G ++P +
Sbjct: 571 SAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKG-VKPTT 613



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 168/367 (45%), Gaps = 26/367 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRNAMYVL 199
           IVY+ +++          AK ++  M  RGI  RP    F+ ++ +  + G++  A  + 
Sbjct: 473 IVYHSLIQGFCMHGNLVKAKELVSEMMSRGIP-RPNIVFFNSIINSLCKEGRVVEAHDIF 531

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +      P+++  N+ I    +  K+ KA   L+ M  AGI P+V++YN LI GYC  
Sbjct: 532 DFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRN 591

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            RI D + L  EM  KG  P  ++Y  ++                        LF+D GR
Sbjct: 592 GRIDDGLILFGEMLSKGVKPTTITYGIIL----------------------HGLFND-GR 628

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
              AK++ ++M + G   D+ T   ++ G CR    D+A  M +++     K N      
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINT 688

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++ +    K  EA+E+ ++       PNA TY V++  L +EG + EA ++   M K G
Sbjct: 689 MIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSG 748

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P+   +N +I+ L  +G++  A  +M +   K  ++     + L+  F ++G   E +
Sbjct: 749 CAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDV 808

Query: 500 SLLDDMY 506
            LL   Y
Sbjct: 809 KLLPAKY 815



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 123/304 (40%), Gaps = 25/304 (8%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D I +  +++        + A  VL  M   GIE    +++ L+  Y R G++ + + 
Sbjct: 540 RPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLI 599

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M    V P  +     +H L    +   A +    M  +G T ++ T   ++ G C
Sbjct: 600 LFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLC 659

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
                              C  + ++ +  +G +  +  I  +  +++ M       +  
Sbjct: 660 R----------------NNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAM-------YKV 696

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            + EEAKEL + +S  G +P+  TY  ++    + G +++A  M   M   GC P++   
Sbjct: 697 RKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLL 756

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              +  L   G+ ++A   +   + +  +  A T S++M    REGK  E  DV     K
Sbjct: 757 NYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWE--DVKLLPAK 814

Query: 438 KGFF 441
             FF
Sbjct: 815 YQFF 818


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 154/607 (25%), Positives = 270/607 (44%), Gaps = 58/607 (9%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADR-QW 135
           LV+++  ++   + W   L+         L       VL    D  + L+FF W  R Q+
Sbjct: 30  LVKDILEVLHTHNQWEENLQTRFSES-EVLASDVAHLVLDRIRDVELGLKFFDWVSRGQY 88

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
               +   Y  +L++L+++++    + VL  M    +    EA S ++ AYS +G +  A
Sbjct: 89  SGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKA 148

Query: 196 MYVLSMMQKA-AVAPNLLICNTAIHVLV-------------------------VGN---- 225
           + +   + K     P+++ CN+ +++LV                         V N    
Sbjct: 149 LELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTC 208

Query: 226 ----------KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
                     KL +  + +E     G  PN++ YN LI GYC    ++ A  L  E+ LK
Sbjct: 209 IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK 268

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDSNLFHD----QGRIEEA 323
           G  P   +Y  ++   CK+   K +  L+ +M        V   N   D     G I +A
Sbjct: 269 GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKA 328

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
            E +  M + GC PD+VTY  +++G CR G++ +A ++L+Q    G  PN  SYT  ++ 
Sbjct: 329 VETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHA 388

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
            C  G    A   +    E    P+ +TY  ++HGL   G++  A  +  +M+++G FP 
Sbjct: 389 YCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPD 448

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
               N+L+  LC++ K+  AK  + E L++    +   + +L+ GF + G+L+EA  L +
Sbjct: 449 AGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFE 508

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
                  +P  V Y  +I    K G +++A   + +M  + L P   TY TVI  Y +  
Sbjct: 509 LTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQH 568

Query: 564 RVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
            ++   K+  +M+ K KC+     Y  +I   C  G L  + KI  ++       +  T 
Sbjct: 569 DLDGAQKMFREMV-KMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTY 627

Query: 621 HVLVESY 627
            +L+ S+
Sbjct: 628 SILIGSF 634



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 202/444 (45%), Gaps = 28/444 (6%)

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           R+L  M  RG+    + ++ ++ A  + G +  A+  +  M +    P+++  NT I   
Sbjct: 295 RLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGS 354

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
               K+++A + LE+    G+ PN  +Y  LI  YC       A   + EM  +G  PD 
Sbjct: 355 CRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDL 414

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG-------------RIEEAKELVN 328
           V+Y  ++  L     +     + EKM+ +  +F D G             ++  AK L+ 
Sbjct: 415 VTYGALVHGLVVAGEVDVALTIREKML-ERGVFPDAGIYNILMSGLCKKFKLPAAKLLLA 473

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +M     +PD   Y  +V+GF R G LD+A+K+ +     G  P  V Y A + G C  G
Sbjct: 474 EMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFG 533

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              +A   IN  ++    P+  TYS V+ G  ++  L  A  + REMVK    P  V   
Sbjct: 534 MMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYT 593

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            LI   CR+G +  + K  +E    G   NVV ++ LI  FC++  L +A S  ++M + 
Sbjct: 594 SLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMN 653

Query: 509 KKDPDTVTYTTIIDALSKNG---------RVEEATELMM-----KMLSKGLVPTVVTYRT 554
           K  P+ VT+  +++  SKNG           +E  + M      +M+S G  P    Y +
Sbjct: 654 KCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNS 713

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK 578
           ++   CQ G     L+L  KM SK
Sbjct: 714 ILICLCQYGMFRTALQLSNKMTSK 737



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 213/476 (44%), Gaps = 28/476 (5%)

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           +G     E +  ++  + + G  +    +L  M    +  N+ + NT I        + K
Sbjct: 268 KGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVK 327

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A+  +E M   G  P+++TYN LI G C   ++ +A +L+++   KG  P+K SY  ++ 
Sbjct: 328 AVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIH 387

Query: 290 YLCKEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIP 337
             CK+       + + +M         V    L H     G ++ A  +  +M + G  P
Sbjct: 388 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFP 447

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D   Y  +++G C+  +L  AK +L +M      P+   Y   ++G   NG   EAR++ 
Sbjct: 448 DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLF 507

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
             + E+   P  + Y+ ++ G  + G + +A   +  M K+   P     + +I    ++
Sbjct: 508 ELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQ 567

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
             +DGA+K  +E +   C  NVV +TSLI GFC+KGDL  +L +  +M  C   P+ VTY
Sbjct: 568 HDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTY 627

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG-------------- 563
           + +I +  K  ++ +A     +ML    VP  VT+  +++ + + G              
Sbjct: 628 SILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQEN 687

Query: 564 RVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           +    L    +M+S        AYN ++  LC +G    A ++  K+       D+
Sbjct: 688 KQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDS 743



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 217/477 (45%), Gaps = 36/477 (7%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P  FSY  L+ AY + G    A   L  M +    P+L+     +H LVV  ++  AL  
Sbjct: 377 PNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTI 436

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
            E+M   G+ P+   YN L+ G C   ++  A  L+ EM  +   PD   Y T++    +
Sbjct: 437 REKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIR 496

Query: 294 EKRIKEVRDL----MEKMVNDSNLFHDQ--------GRIEEAKELVNQMSQMGCIPDVVT 341
              + E R L    +EK +N   + ++         G +++A   +N+M +    PD  T
Sbjct: 497 NGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFT 556

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y+ V++G+ +  +LD A+KM ++M    CKPN V+YT+ +NG C  G    + ++    +
Sbjct: 557 YSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQ 616

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                PN +TYS+++    +E KL +A     EM+     P  V  N L+    + G   
Sbjct: 617 ACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRA 676

Query: 462 GAKK--------------FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            ++K              F    ++ G A     + S++   CQ G    AL L + M  
Sbjct: 677 ISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTS 736

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD+V++  ++  +   GR +E   ++   L++  +   V Y +++ +Y   G  E 
Sbjct: 737 KGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQGTSEA 796

Query: 568 LLKLLEKMLSKQKCRTAYNQVIENL-CSFG---YLEEAGKILGKVLRTASKADASTC 620
            + +L+ M   ++C++ +++V +N+  SF    YL +    +  +LR    +    C
Sbjct: 797 SV-ILQTMF--EECQS-HSKVGDNIQVSFSNQLYLHDTKAGVTLLLRNGLDSSEDHC 849



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 182/389 (46%), Gaps = 38/389 (9%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  RG+      ++ LM    +  KL  A  +L+ M   +V P+  +  T +   +    
Sbjct: 440 MLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGN 499

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L +A +  E     G+ P ++ YN +IKGYC    +KDA+  I+ M  +  +PD+ +Y T
Sbjct: 500 LDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYST 559

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           V+    K+                    HD   ++ A+++  +M +M C P+VVTYT+++
Sbjct: 560 VIDGYVKQ--------------------HD---LDGAQKMFREMVKMKCKPNVVTYTSLI 596

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           NGFCR G+L ++ K+ ++M   G  PN V+Y+  +   C   K ++A             
Sbjct: 597 NGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCV 656

Query: 407 PNAITYSVVMHGLRREGK--LSEACDVVRE------------MVKKGFFPTPVEINLLIQ 452
           PN +T++ +++G  + G   +SE  +  +E            M+  G+ P     N ++ 
Sbjct: 657 PNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILI 716

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+ G    A +   +  +KGC  + V+F +L+ G C +G  +E  +++      ++  
Sbjct: 717 CLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQ 776

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKML 541
             V Y++I+D     G   EA+ ++  M 
Sbjct: 777 IAVNYSSILDQYLPQG-TSEASVILQTMF 804



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 192/406 (47%), Gaps = 9/406 (2%)

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVN-QMSQMGCIPDVVTYT 343
           ++ M  + +  R++E+    E M      + D G +E+A EL    +      PDV+   
Sbjct: 110 FSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACN 169

Query: 344 AVVNGFCRVGELDQAKKMLQQMYH-HGCKPNTV---SYTAFLNGLCHNGKSLEAREMINT 399
           +++N   ++G ++ A+K+  +M    G     V   S    + GLC  GK  E R++I  
Sbjct: 170 SLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIED 229

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
              +   PN I Y+ ++ G  ++G +  A  +  E+  KGF PT      +I   C++G 
Sbjct: 230 RWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGD 289

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
                + + E  ++G  VNV  + ++I    + G + +A+  ++ M  C   PD VTY T
Sbjct: 290 FKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNT 349

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK- 578
           +I    ++G+V EA +L+ + L KGL+P   +Y  +IH YC+ G  +     L +M  + 
Sbjct: 350 LISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERG 409

Query: 579 -QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
            +     Y  ++  L   G ++ A  I  K+L      DA   ++L+ S L K   L A 
Sbjct: 410 HKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILM-SGLCKKFKLPAA 468

Query: 638 KVA-CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           K+    M +++++PD  +   + +  I  G  +EA  L    +E+G
Sbjct: 469 KLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 514



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 151/328 (46%), Gaps = 33/328 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  VY  +++   +      A+++  L   +G+      ++ ++  Y + G +++AM  +
Sbjct: 483 DAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACI 542

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC-- 257
           + M+K  +AP+    +T I   V  + L  A +    M      PNV+TY  LI G+C  
Sbjct: 543 NRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRK 602

Query: 258 -DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV------ND 310
            DLHR   ++K+  EM   G  P+ V+Y  ++G  CKE ++ +     E+M+      ND
Sbjct: 603 GDLHR---SLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPND 659

Query: 311 ------SNLFHDQG---------RIEEAKE-----LVNQMSQMGCIPDVVTYTAVVNGFC 350
                  N F   G           +E K+        +M   G  P    Y +++   C
Sbjct: 660 VTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLC 719

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           + G    A ++  +M   GC P++VS+ A L+G+C  G+S E + +++ +  E     A+
Sbjct: 720 QYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAV 779

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKK 438
            YS ++     +G  SEA  +++ M ++
Sbjct: 780 NYSSILDQYLPQGT-SEASVILQTMFEE 806


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 213/394 (54%), Gaps = 13/394 (3%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           +L+A+ GI+    ++  L+    + G  R A+ ++  +      PN+ + NT I  L   
Sbjct: 154 KLLAQ-GIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKY 212

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             +++A      M   GI+ +V+TY  LI G+C   ++K+AI L++EM LK  +P+  +Y
Sbjct: 213 QLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTY 272

Query: 285 YTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHDQGRIEE---AKELVNQMSQ 332
             ++  LCKE ++KE ++++  M         +  S L      + E   A+ + N MS 
Sbjct: 273 NILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSL 332

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           MG  PDV +YT ++NGFC+   +D+A  + ++M+     P  V+Y++ ++GLC +G+   
Sbjct: 333 MGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISY 392

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
             ++I+   +     N ITY+ ++ GL + G L  A  +  +M  +G  P      +L+ 
Sbjct: 393 VWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLD 452

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+ G++  A++  Q+ L KG  ++V  +  +I G C++G LEEAL++L  M      P
Sbjct: 453 GLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVP 512

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           + VT+  II+AL K    ++A +L+ +M+ +GL+
Sbjct: 513 NAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 228/503 (45%), Gaps = 27/503 (5%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           +R    RH P  I +  +L+  +K K    A  +   +  +GI+      + L+  +   
Sbjct: 48  NRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHM 107

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G++     VL+ + K    P+ +   T I  L +  ++ KAL F +++   GI  + ++Y
Sbjct: 108 GQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSY 167

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             LI G C +   + AIKL+ ++  +   P+   Y T++  LCK + +            
Sbjct: 168 GTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLV------------ 215

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                       EA  L ++M+  G   DVVTYT ++ GFC   +L +A  +L +M    
Sbjct: 216 -----------SEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKT 264

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PN  +Y   ++ LC  GK  EA+ ++    +    P+ ITYS +M G     +L +A 
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQ 324

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            V   M   G  P      +LI   C+   +D A    +E   K     +V ++SLI G 
Sbjct: 325 HVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ G +     L+D+M       + +TY ++ID L KNG ++ A  L  KM  +G+ P  
Sbjct: 385 CKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCS 444

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGK 607
            T+  ++   C+ GR++D  +  + +L+K      Y  N +I   C  G LEEA  +L K
Sbjct: 445 FTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSK 504

Query: 608 VLRTASKADASTCHVLVESYLNK 630
           +       +A T  +++ +   K
Sbjct: 505 MEENGCVPNAVTFDIIINALFKK 527



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/492 (23%), Positives = 228/492 (46%), Gaps = 60/492 (12%)

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           + A+    R++L GI P+++T N LI  +C + +I     ++ ++  +G  P  +++ T+
Sbjct: 76  STAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTL 135

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +  LC           ++  VN +  FHD+            +   G   D V+Y  ++N
Sbjct: 136 IKGLC-----------LKGQVNKALHFHDK------------LLAQGIKFDQVSYGTLIN 172

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G C++G+   A K+++++     KPN   Y   ++ LC      EA  + +    +  + 
Sbjct: 173 GVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISA 232

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           + +TY+ +++G     KL EA  ++ EMV K   P     N+L+ +LC+EGK+  AK  +
Sbjct: 233 DVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVL 292

Query: 468 -------------------------------QECLNK----GCAVNVVNFTSLIRGFCQK 492
                                          Q   N     G   +V ++T LI GFC+ 
Sbjct: 293 AVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKN 352

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
             ++EAL+L  +M+     P  VTY+++ID L K+GR+    +L+ +M  +G+   V+TY
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITY 412

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
            ++I   C+ G ++  + L  KM  +  + C   +  +++ LC  G L++A +    +L 
Sbjct: 413 NSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLT 472

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                D    +V++  +  +G+   A  +  +M     +P+      +   L  + ++++
Sbjct: 473 KGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDK 532

Query: 671 ADTLMLRFVERG 682
           A+ L+ + + RG
Sbjct: 533 AEKLLRQMICRG 544



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 178/344 (51%), Gaps = 12/344 (3%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
           +Y  +++ L K +L   A  +   M  +GI      ++ L+  +  A KL+ A+ +L+ M
Sbjct: 201 MYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEM 260

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
               + PN+   N  +  L    K+ +A   L  M  A + P+V+TY+ L+ GY  ++ +
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYEL 320

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNL 313
           K A  + + M L G +PD  SY  ++   CK K + E  +L ++M         V  S+L
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380

Query: 314 FHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                  GRI    +L+++M   G   +V+TY ++++G C+ G LD+A  +  +M   G 
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGI 440

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P + ++T  L+GLC  G+  +A+E       + +  +   Y+V+++G  ++G L EA  
Sbjct: 441 RPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALT 500

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ +M + G  P  V  +++I +L ++ + D A+K +++ + +G
Sbjct: 501 MLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/375 (20%), Positives = 169/375 (45%), Gaps = 6/375 (1%)

Query: 314 FHDQG-RIEEAKELVNQMSQMGCI---PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           FH Q   I+   + V+Q ++M C+   P ++ +  +++ F ++     A  +  ++   G
Sbjct: 30  FHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKG 89

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            +P+ ++    +N  CH G+      ++    +  + P+ IT++ ++ GL  +G++++A 
Sbjct: 90  IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKAL 149

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
               +++ +G     V    LI  +C+ G   GA K +++   +    NV  + ++I   
Sbjct: 150 HFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDAL 209

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+   + EA  L  +M       D VTYTT+I       +++EA  L+ +M+ K + P V
Sbjct: 210 CKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNV 269

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
            TY  ++   C+ G+V++   +L  ML    +     Y+ +++       L++A  +   
Sbjct: 270 YTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNA 329

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +       D  +  +L+  +    +   A  +   M  +N++P +     + + L   G+
Sbjct: 330 MSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 668 SEEADTLMLRFVERG 682
                 L+    +RG
Sbjct: 390 ISYVWDLIDEMRDRG 404


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 246/504 (48%), Gaps = 16/504 (3%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  ++   ++    + A +V+  M   G E     ++ L +   +AGK+  A  +   M
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEM 339

Query: 203 QKAAVA-PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           ++   A P+++  NT +         + ALR LE M+  G+ P ++T+N ++K  C   +
Sbjct: 340 ERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN----------DS 311
           +++A+  ++++  +G +PD ++Y T++   CK   + +   LM++MV           ++
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459

Query: 312 NLFH--DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
            L++     R E+A+EL++   Q G +PD V+Y  V+  + +    + A ++  QM    
Sbjct: 460 VLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             P+  +Y   + GLC   +  EA + +N   E+   P+  TY++++H   +EG L  A 
Sbjct: 520 LIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAF 579

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
               +MV+  F P  V  N L+  LC  GK+D A K  +  + KG  V+V+ + +LI+  
Sbjct: 580 RFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSM 639

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ GD++ AL   DDM +    PD  TY  ++ ALS+ GR EEA  ++ K+   G +   
Sbjct: 640 CKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQS 699

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILG 606
                +         V++     E   S++    A   Y + +  LC+ G L+EA  +L 
Sbjct: 700 FACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLD 759

Query: 607 KVLRTASKADASTCHVLVESYLNK 630
           ++++     D ST   L+E  + +
Sbjct: 760 EMMQKGMPVDCSTYITLMEGLIKR 783



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 250/537 (46%), Gaps = 26/537 (4%)

Query: 152 SKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNL 211
           S + L Q +  V R +    +      F+ L+  +   G L +A+  LS MQ   ++P+ 
Sbjct: 184 SPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDA 243

Query: 212 LICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
           +  NT ++       L +A   L RM+  GI P   TYN L+  +  L  IK A K+++ 
Sbjct: 244 VTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVES 303

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMS 331
           M   G  PD  +Y  +   LC+                        G+++EA  L ++M 
Sbjct: 304 MTAYGFEPDLRTYNVLAMGLCQ-----------------------AGKVDEAFRLKDEME 340

Query: 332 QMG-CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
           ++G  +PDVVTY  +V+   +      A ++L++M   G KP  V++   +  LC  GK 
Sbjct: 341 RLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKL 400

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA   +    EE   P+ ITY+ ++    + G +++A  ++ EMV KG       +N +
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTV 460

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           + +LC+  + + A++ +     +G   + V++ +++  + ++ + E AL L D M   K 
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P   TY T+I  L +  R++EA + + + + KGLVP   TY  +IH YC+ G +E+  +
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580

Query: 571 LLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
              KM+  S +      N ++  LC  G L++A K+    +    K D  T + L++S  
Sbjct: 581 FHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMC 640

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ 685
             G    A      M  + L PD      V   L   G+SEEA  ++ +  + G + 
Sbjct: 641 KVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLS 697



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 203/432 (46%), Gaps = 17/432 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMY 197
           D + Y  +++   K +    A R+L  M  +G+  +P   ++ +V  S  + GKL  A+ 
Sbjct: 348 DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGV--KPTLVTHNIVVKSLCKEGKLEEALG 405

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            L  + +  +AP+++  NT I        +AKA   ++ M   G+  +  T N ++   C
Sbjct: 406 KLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC 465

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND------- 310
            + R +DA +L+   P +G  PD+VSY TVM    KE   +    L ++M+         
Sbjct: 466 KMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS 525

Query: 311 --SNLFHDQGRIEEAKELVNQMSQM---GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             + L     R+E  KE ++++++    G +PD  TY  +++ +C+ G+L+ A +   +M
Sbjct: 526 TYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKM 585

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
             +  KP+ V+    +NGLC +GK  +A ++  +  E+    + ITY+ ++  + + G +
Sbjct: 586 VENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDV 645

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             A     +M  KG  P     N+++ +L   G+ + A   + +  + G          L
Sbjct: 646 DTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLL 705

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTV-TYTTIIDALSKNGRVEEATELMMKMLSKG 544
                 + D++E     +     K   + + TY   ++ L   G+++EA  ++ +M+ KG
Sbjct: 706 KPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKG 765

Query: 545 LVPTVVTYRTVI 556
           +     TY T++
Sbjct: 766 MPVDCSTYITLM 777



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 152/358 (42%), Gaps = 44/358 (12%)

Query: 334 GCIPDVVTYTAVVNGFCRV------GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           G  P +    AV++   R         LD  + +++   H    PN  ++   ++  C  
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLH----PNHYTFNLLVHTHCSK 221

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G   +A   ++T +    +P+A+TY+ +++   R+G L EA  ++  M + G  PT    
Sbjct: 222 GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTY 281

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM-Y 506
           N L+ +  R G +  A K ++     G   ++  +  L  G CQ G ++EA  L D+M  
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMER 341

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
           L    PD VTY T++DA  K     +A  L+ +M  KG+ PT+VT+              
Sbjct: 342 LGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTH-------------- 387

Query: 567 DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
                              N V+++LC  G LEEA   L K+       D  T + L+++
Sbjct: 388 -------------------NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           Y   G    A+ +   M  + L  D      V   L    + E+A+ L+    +RG +
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFV 486


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 225/453 (49%), Gaps = 38/453 (8%)

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           + YN ++ GYC   ++  A +L+ EMP++   PD  +Y T++  LC              
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCG------------- 44

Query: 307 MVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                     +GR   A  ++++M +  C+PDVVTYT ++   C+     QA K+L +M 
Sbjct: 45  ----------RGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 94

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             GC P+ V+Y   +NG+C  G+  +A E +         PN ++Y++V+ GL    +  
Sbjct: 95  DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 154

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A +++ EM +KG  P  V  N+LI  LCR+G ++ A + +++    GC  N +++  L+
Sbjct: 155 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 214

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
             FC++  +++A++ LD M      PD V+Y T++ AL ++G V+ A EL+ ++  KG  
Sbjct: 215 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 274

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKI 604
           P +++Y TVI    + G+ ++ L+LL +M+SK  Q     Y+ +   LC    +E+A + 
Sbjct: 275 PVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRA 334

Query: 605 LGKVLRTASKADASTCHVLVESYLNK-----GIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
            GKV     + +    + ++     +      I L AY     M     +P+      + 
Sbjct: 335 FGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY-----MIGNGCMPNESTYTILI 389

Query: 660 ERLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
           E L  EG  +EA  L+     R   +   + HL
Sbjct: 390 EGLAYEGLIKEARDLLDELCSRAGEEILLDVHL 422



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 207/394 (52%), Gaps = 16/394 (4%)

Query: 165 RLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           RL+A   +E  P+A++Y  L+      G+  NA+ VL  M +    P+++     +    
Sbjct: 21  RLVAEMPVE--PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATC 78

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
             +   +A++ L+ M+  G TP+++TYN ++ G C   R+ DAI+ +  +P  GC P+ V
Sbjct: 79  KRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 138

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQM 330
           SY  V+  LC  +R ++  +LM +M                +    +G +E A E++ Q+
Sbjct: 139 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 198

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            + GC P+ ++Y  +++ FC+  ++D+A   L  M   GC P+ VSY   L  LC +G+ 
Sbjct: 199 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 258

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             A E+++  +++   P  I+Y+ V+ GL + GK  EA +++ EMV KG  P  +  + +
Sbjct: 259 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 318

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
              LCRE +++ A +   +  + G   N V + ++I G C++ +   A+ L   M     
Sbjct: 319 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 378

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
            P+  TYT +I+ L+  G ++EA +L+ ++ S+ 
Sbjct: 379 MPNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 242/500 (48%), Gaps = 52/500 (10%)

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           E F+ L+  Y R G++  A+ +L  M+    AP+++  NT ++       L  A + +  
Sbjct: 18  EHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGE 77

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           + L  + PNV+TY  LI  YC    ++DA+ + DEM +K   PD V+Y  +M  LCK  +
Sbjct: 78  ISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGK 137

Query: 297 IKEVRDL---MEKMVNDSNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
           ++E + +   ME++    N F           +G + EA  L  +M   G   DVV YTA
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++G  + G  + A+ M Q +      PN V+Y+A ++G C  G   +   ++   EE+ 
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV------------------- 445
             PN I YS ++ G  ++G L+EA DV+R+MV++   P                      
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317

Query: 446 ------------EINLLIQS----LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
                       E N +I S    L R G+M+ A +  ++ +++G   + VN+TS++ GF
Sbjct: 318 DLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE-EATELMMKMLSKGLVPT 548
            + G   +A ++  +M       D V Y  +I+ L K G+ E E+    M+ L  GL P 
Sbjct: 378 FKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL--GLAPD 435

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
             T+ T+I+ YC+ G + + LKLL +M S   +      N +++ LC+ G +E+   +L 
Sbjct: 436 SATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLN 495

Query: 607 KVLRTASKADASTCHVLVES 626
            +L        +T   ++++
Sbjct: 496 DMLVMGFHPTPTTHKAVLDA 515



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 201/414 (48%), Gaps = 25/414 (6%)

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
           R L   Q   I  +V  +N LI GYC    I  A++L++ M  +G +PD V+Y T+M   
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           CK      + DL                   AK+L+ ++S +   P+V+TYT +++ +C+
Sbjct: 63  CK------IGDLFT-----------------AKKLMGEISLVNLEPNVITYTTLIDAYCK 99

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
              L+ A  M  +M      P+ V+YT  +NGLC +GK  EA+ +    EE    PN  +
Sbjct: 100 SQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFS 159

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+ ++  L +EG ++EA  +   MV +G     V    L+  L + G  + A+   Q  L
Sbjct: 160 YATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLL 219

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            +    N V +++LI G C+ GD+ +   LL +M      P+ + Y++I+D  +K G + 
Sbjct: 220 EESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLN 279

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVI 589
           EA ++M KM+ + ++P V  Y T+I  Y +  +    L L ++M S+  ++     +  +
Sbjct: 280 EAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFV 339

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            NL   G +EEA ++   ++      D      +++ +   G    A+ +A  M
Sbjct: 340 NNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/608 (21%), Positives = 267/608 (43%), Gaps = 64/608 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D +VY  +++ L K  +   A+ + +++    +      +S L+  + + G +     +L
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++  + PN+++ ++ +        L +A+  + +M    I PNV  Y  LI GY   
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VND 310
            +   A+ L  EM  +G   +     + +  L +  R++E  +L + M         VN 
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 311 SNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +++   F   G+  +A  +  +M++     DVV Y  ++NG  ++G+  +++     M  
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQ 429

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P++ ++   +N  C  G    A +++N  +     PN+IT ++++  L   G++ +
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 428 ACDVVREMVKKGFFPTPV-----------------------------------EINLLIQ 452
             D++ +M+  GF PTP                                      N LI 
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLIS 549

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           + CR G +  A    ++ + KG   +++ + +LI G+C    L++A ++   M      P
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           +  TY  ++  LS    ++EA  L+ +M  +GLVP   TY  ++  + ++G +++ +KL 
Sbjct: 610 NVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLY 669

Query: 573 EKMLSK---QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV----- 624
            +M++K    K RT YN +I        + +A +++ ++       ++ST  +L+     
Sbjct: 670 CEMITKGFVPKTRT-YNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYK 728

Query: 625 ---ESYLNKGIPLLAYKVACRMF----NRNLIPDLKLCKKVSERLILEGKSEEADTLMLR 677
              +  LNK +       A R+F     +  IP       +S  L   GK  +A  ++ +
Sbjct: 729 LSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNK 788

Query: 678 FVERGHIQ 685
             ++  +Q
Sbjct: 789 LYKKKTVQ 796



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 159/665 (23%), Positives = 286/665 (43%), Gaps = 64/665 (9%)

Query: 43  SDDHFMVLDSFDKYRVNREEIRRV-VLEEDEFRHP---------LVREVCRLIELRSAWS 92
           S +HF VL   D Y  N E  R V +LE  +   P         L+   C++ +L +A  
Sbjct: 16  SVEHFNVL--IDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA-- 71

Query: 93  PKLEGELRNLLRSLKPRQIC------AVLRSQADERVALQFFYWADRQWRYRHDPIVYYM 146
            KL GE+   L +L+P  I       A  +SQ  E     + Y          D + Y  
Sbjct: 72  KKLMGEIS--LVNLEPNVITYTTLIDAYCKSQCLEDAL--YMYDEMTVKSLVPDVVTYTC 127

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQK 204
           ++  L K+   + AK V R M   G+   P  FSY  L+ +  + G +  A  +   M  
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGV--VPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV 185

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
             +  ++++    +  L        A    + +    + PN +TY+ LI G+C L  +  
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNK 245

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAK 324
              L+ EM  K   P+ + Y +++    K+  + E  D+M KMV                
Sbjct: 246 GELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV---------------- 289

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
                  Q   +P+V  Y  +++G+ +  +   A  + ++M   G + N     +F+N L
Sbjct: 290 -------QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNL 342

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             +G+  EA E+          P+ + Y+ +M G  + GK S+A ++ +EM +K      
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N+LI  L + GK + ++ F       G A +   F ++I  +C++G+L  AL LL++
Sbjct: 403 VAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE 461

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      P+++T   ++  L   G +E+  +L+  ML  G  PT  T++ V+    +  R
Sbjct: 462 MKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR 521

Query: 565 VEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
            + +L   +++  +  +   + YN +I   C  G +  A  +   ++     AD  T + 
Sbjct: 522 ADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNA 581

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS-----EEADTLMLR 677
           L+  Y        A+ V  +M    + P+++     +  ++L G S     +EA  L+ +
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVE-----TYNILLGGLSAARLIKEAAGLVNQ 636

Query: 678 FVERG 682
             ERG
Sbjct: 637 MKERG 641


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 227/480 (47%), Gaps = 14/480 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A++V   M R G+      F  L+V   R GK+     +L+ M +   + +   C   + 
Sbjct: 57  ARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 116

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    +      F  RM   G  PNV+ Y   I G C    +K A  +++EM  +G  P
Sbjct: 117 SLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 176

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-------------FHDQGRIEEAKEL 326
           +  ++ T++  LCK    +    L  K++  S+              +  +G++  A+ L
Sbjct: 177 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 236

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           + +M + G  P+  TYT ++ G C+ G  D+A +++ +M   G  PN  +Y A ++G C 
Sbjct: 237 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 296

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            GK  EA +++  +  +    + ITY++++    ++G ++ A D+   MV+ G  P    
Sbjct: 297 KGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEA 356

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
              LI + C++ +M+ ++KF  +CL  G       +TS+I G+C+ G    AL + + M 
Sbjct: 357 YTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMV 416

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                 D++TY  +I  L K  R+EEA  L   ML K LVP  VT  T+   YC+  +  
Sbjct: 417 QNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTS 476

Query: 567 DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
             + +L+++  +Q+  T  + V+  L + G ++ A   L KVL      D +T    + S
Sbjct: 477 IAVSVLDRLDKRQQVHTV-DVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINS 535



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 211/441 (47%), Gaps = 17/441 (3%)

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           E    ++ A+  AG+L  A  ++  M+   +   +   N  + V +       A +  + 
Sbjct: 4   EVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDG 63

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M  AG++P    +  L+   C   ++++   L+  M   G S D  +   V+  LC++ R
Sbjct: 64  MTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 123

Query: 297 IKEVRDLMEKMVNDS---NLFHDQGRIE---------EAKELVNQMSQMGCIPDVVTYTA 344
            K+V +   +M+      N+ +    I+         +A  ++ +M   G  P+V T+T 
Sbjct: 124 FKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 183

Query: 345 VVNGFCRVGELDQAKKM-LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
           +++G C++G  ++A ++ L+ +     KPN  +YT  + G C  GK   A  ++    E+
Sbjct: 184 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 243

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              PN  TY+ ++ G  + G    A +++ +M ++GF P     N +I   C++GK+  A
Sbjct: 244 GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 303

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            K ++   ++G   + + +T LI   C++G +  AL L D M      PD   YT++I  
Sbjct: 304 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIST 363

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC-- 581
             +  ++EE+ +   K L  GL+PT  TY ++I  YC+VGR    L++ E+M+ +  C  
Sbjct: 364 YCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMV-QNGCFA 422

Query: 582 -RTAYNQVIENLCSFGYLEEA 601
               Y  +I  LC    LEEA
Sbjct: 423 DSITYGALISGLCKESRLEEA 443



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 152/345 (44%), Gaps = 7/345 (2%)

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           F + GR+ EA ++V +M   G    V T   V+      G    A+K+   M   G  P 
Sbjct: 13  FGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPM 72

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
              + A +   C  GK  E   ++       ++ +  T +VV+  L  +G+  +  +  R
Sbjct: 73  NRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFR 132

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            M++ G  P  V     I  LC+   +  A   ++E + +G   NV   T+LI G C+ G
Sbjct: 133 RMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIG 192

Query: 494 DLEEALSLLDDMYLCKKD---PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
             E A  L   + L K     P+  TYT +I    + G++  A  L+++M+ +GL P   
Sbjct: 193 WTERAFRLF--LKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTN 250

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKV 608
           TY T+I  +C+ G  +   +L+ KM  +        YN VI+  C  G ++EA K+L   
Sbjct: 251 TYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMA 310

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
                K D  T  +L+  +  +G    A  +  RM      PD++
Sbjct: 311 TSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIE 355



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/367 (21%), Positives = 166/367 (45%), Gaps = 36/367 (9%)

Query: 130 WADRQWR----------YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF 179
           W +R +R          Y+ +   Y +M+    +      A+ +L  M  +G++     +
Sbjct: 193 WTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTY 252

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
           + L+  + + G    A  +++ M++    PN+   N  I       K+ +A + L     
Sbjct: 253 TTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 312

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
            G+  + +TY  LI  +C    I  A+ L D M   GC PD  +Y +++   C+++    
Sbjct: 313 QGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQR---- 368

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                              ++EE+++  ++   +G +P   TYT+++ G+C+VG    A 
Sbjct: 369 -------------------QMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLAL 409

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++ ++M  +GC  ++++Y A ++GLC   +  EA+ +     ++   P  +T   +    
Sbjct: 410 RVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEY 469

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            R  K S A  V+  + K+    T   ++++++ L   G +D A  F+++ L++  AV+ 
Sbjct: 470 CRREKTSIAVSVLDRLDKRQQVHT---VDVVVRKLSALGDVDAASLFLKKVLDEDYAVDH 526

Query: 480 VNFTSLI 486
             +T  I
Sbjct: 527 ATYTGFI 533



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 3/252 (1%)

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G    A  V   M + G  P       L+   CREGK++     +      G +++    
Sbjct: 52  GSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATC 111

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           T ++R  C+KG  ++       M      P+ V YT  ID L K   V++A  ++ +M+ 
Sbjct: 112 TVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVG 171

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLE 599
           +GL P V T+ T+I   C++G  E   +L  K++     +     Y  +I   C  G L 
Sbjct: 172 RGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLA 231

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
            A  +L +++    K + +T   L+  +   G    A+++  +M     +P++     V 
Sbjct: 232 RAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVI 291

Query: 660 ERLILEGKSEEA 671
           +    +GK +EA
Sbjct: 292 DGFCKKGKIQEA 303



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 9/263 (3%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  +++   K    Q A +VLR+   +G++     ++ L+  + + G +  A+ +   M
Sbjct: 286 TYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRM 345

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            +    P++    + I       ++ ++ +F ++  + G+ P   TY  +I GYC + R 
Sbjct: 346 VENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRS 405

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNL 313
             A+++ + M   GC  D ++Y  ++  LCKE R++E + L E M         V    L
Sbjct: 406 TLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTL 465

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
             +  R E+    V+ + ++     V T   VV     +G++D A   L+++       +
Sbjct: 466 TFEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVD 525

Query: 374 TVSYTAFLNGLCHNGKSLEAREM 396
             +YT F+N    N +   A EM
Sbjct: 526 HATYTGFINSCYENNRYALASEM 548


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 162/632 (25%), Positives = 289/632 (45%), Gaps = 49/632 (7%)

Query: 77  LVREVCRLI--------ELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADER---VAL 125
           +VR +C L+         +R    PKL   L +   SL   Q   V+ S ADE    VAL
Sbjct: 62  VVRTICSLVCQSYYQQTHVRFT-PPKLHLPLDS--ESLTHDQAITVVASLADEAGSMVAL 118

Query: 126 QFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA 185
            F YWA    ++RH     +M L I+S T L          +  + +E   E    +++ 
Sbjct: 119 SFLYWAIGFPKFRH-----FMRLYIVSATAL----------IGNKNLERANEVMQCMVMN 163

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
           ++  GKL+ A+ ++  MQ   + P+    N  + V V    +  A      M   G++P+
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
            +++  ++   C++ R+ +A + ++ M  +G   D  +   ++   C++  +  V     
Sbjct: 224 CVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW 283

Query: 306 KMV---------NDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
           KMV         N + L +    QG I++A EL+ +M + G  P+V T+T +++G C+ G
Sbjct: 284 KMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKG 343

Query: 354 ELDQAKKM-LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
             ++A ++ L+ +   G KPN  +YTA +NG C   K   A  +++  +E+   PN  TY
Sbjct: 344 WTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTY 403

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           + ++ G  + G    A +++  M K+GF P     N +I  LC++G +D A + + +   
Sbjct: 404 TTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSV 463

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            G   + V +T L+   C++ D   +L   + M      PD  +YTT+I    +  +++E
Sbjct: 464 HGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKE 523

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVI 589
           +  L  + +S GL+PT  TY ++I  YC+ G     +KL ++M S   C      Y  +I
Sbjct: 524 SERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM-SNHGCAPDSITYGALI 582

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
             LC    L++A  +   ++         T   L   Y  K     A  V  R+  R  I
Sbjct: 583 SGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWI 642

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
              +    +  +L  EGK + A     + +++
Sbjct: 643 ---RTVNTLVRKLCSEGKLDMAALFFHKLLDK 671



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 193/403 (47%), Gaps = 12/403 (2%)

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           L   K ++   ++M+ MV +   F + G+++EA  +V +M   G +P   T   V++   
Sbjct: 144 LIGNKNLERANEVMQCMVMN---FAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAV 200

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
            +G ++ A+ M  +M   G  P+ VS+   +   C+ G+ LEA   +N   E  +  +  
Sbjct: 201 GMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNA 260

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           T ++++    ++G ++       +MV+ G  P  +    LI  LC++G +  A + ++E 
Sbjct: 261 TCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEM 320

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD---PDTVTYTTIIDALSKN 527
           + +G   NV   T+LI G C+KG  E+A  L   + L + D   P+  TYT +I+   K 
Sbjct: 321 VRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLF--LKLVRSDGYKPNVHTYTAMINGYCKE 378

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG---RVEDLLKLLEKMLSKQKCRTA 584
            ++  A  L+ +M  +GLVP   TY T+I  +C+VG   R  +L+ L+ K        T 
Sbjct: 379 DKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYT- 437

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN +I+ LC  G L+EA ++L KV     +AD  T  +L+  +  +     +     +M 
Sbjct: 438 YNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
                PD+     +      + + +E++ L    V  G I  K
Sbjct: 498 KVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTK 540



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 169/363 (46%), Gaps = 26/363 (7%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A + F    R   Y+ +   Y  M+    K      A+ +L  M  +G+      ++ L+
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             + + G    A  ++ +M K   +PN+   N  I  L     L +A R L ++ + G+ 
Sbjct: 408 DGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQ 467

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
            + +TY  L+  +C       ++   ++M   G +PD  SY T++   C++K++KE   L
Sbjct: 468 ADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERL 527

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            E+ V+                       +G IP   TYT+++ G+CR G    A K+ Q
Sbjct: 528 FEEAVS-----------------------LGLIPTKKTYTSMICGYCRYGNTSLAVKLFQ 564

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M +HGC P++++Y A ++GLC   K  +AR + +   ++  +P  +T   + +   ++ 
Sbjct: 565 RMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKD 624

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
             S A +V+  + K+ +  T   +N L++ LC EGK+D A  F  + L+K   VN V   
Sbjct: 625 DSSTAINVLDRLEKRQWIRT---VNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLL 681

Query: 484 SLI 486
             +
Sbjct: 682 GFM 684



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 9/249 (3%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  +++ L K      A R+L  ++  G++     ++ LM  + R      ++   + M
Sbjct: 437 TYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM 496

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            K    P++    T I       ++ ++ R  E     G+ P   TY  +I GYC     
Sbjct: 497 LKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNT 556

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------NL 313
             A+KL   M   GC+PD ++Y  ++  LCKE ++ + R+L + M++            L
Sbjct: 557 SLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTL 616

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
            ++  + +++   +N + ++     + T   +V   C  G+LD A     ++       N
Sbjct: 617 AYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVN 676

Query: 374 TVSYTAFLN 382
            V+   F+N
Sbjct: 677 RVTLLGFMN 685


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 242/500 (48%), Gaps = 52/500 (10%)

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           E F+ L+  Y R G++  A+ +L  M+    AP+++  NT ++       L  A + +  
Sbjct: 18  EHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGE 77

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           + L  + PNV+TY  LI  YC    ++DA+ + DEM +K   PD V+Y  +M  LCK  +
Sbjct: 78  ISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGK 137

Query: 297 IKEVRDL---MEKMVNDSNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
           ++E + +   ME++    N F           +G + EA  L  +M   G   DVV YTA
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++G  + G  + A+ M Q +      PN V+Y+A ++G C  G   +   ++   EE+ 
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV------------------- 445
             PN I YS ++ G  ++G L+EA DV+R+MV++   P                      
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317

Query: 446 ------------EINLLIQS----LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
                       E N +I S    L R G+M+ A +  ++ +++G   + VN+TS++ GF
Sbjct: 318 DLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE-EATELMMKMLSKGLVPT 548
            + G   +A ++  +M       D V Y  +I+ L K G+ E E+    M+ L  GL P 
Sbjct: 378 FKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL--GLAPD 435

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
             T+ T+I+ YC+ G + + LKLL +M S   +      N +++ LC+ G +E+   +L 
Sbjct: 436 SATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLN 495

Query: 607 KVLRTASKADASTCHVLVES 626
            +L        +T   ++++
Sbjct: 496 DMLVMGFHPTPTTHKAVLDA 515



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 200/414 (48%), Gaps = 25/414 (6%)

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
           R L   Q   I  +V  +N LI GYC    I  A++L++ M  +G +PD V+Y T+M   
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           CK                        G +  AK+L+ ++S +   P+V+TYT +++ +C+
Sbjct: 63  CK-----------------------IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCK 99

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
              L+ A  M  +M      P+ V+YT  +NGLC +GK  EA+ +    EE    PN  +
Sbjct: 100 SQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFS 159

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+ ++  L +EG ++EA  +   MV +G     V    L+  L + G  + A+   Q  L
Sbjct: 160 YATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLL 219

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            +    N V +++LI G C+ GD+ +   LL +M      P+ + Y++I+D  +K G + 
Sbjct: 220 EESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLN 279

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVI 589
           EA ++M KM+ + ++P V  Y T+I  Y +  +    L L ++M S+  ++     +  +
Sbjct: 280 EAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFV 339

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            NL   G +EEA ++   ++      D      +++ +   G    A+ +A  M
Sbjct: 340 NNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 123/554 (22%), Positives = 238/554 (42%), Gaps = 27/554 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D +VY  +++ L K  +   A+ + +++    +      +S L+  + + G +     +L
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++  + PN+++ ++ +        L +A+  + +M    I PNV  Y  LI GY   
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            +   A+ L  EM                    K + ++E   +++  VN+       GR
Sbjct: 311 DQRGIALDLFKEM--------------------KSRGLEENNFVIDSFVNN---LKRSGR 347

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +EEA EL   M   G +PD V YT++++GF + G+   A  + Q+M       + V+Y  
Sbjct: 348 MEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNV 407

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +NGL   GK  E+        +    P++ T++ +++   +EG L  A  ++ EM   G
Sbjct: 408 LINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  +  N+L+Q LC  G+++     + + L  G         +++    +    +  L
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVIL 526

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            + D +       D  TY T+I    + G +  AT +   M+ KG++  ++TY  +IH Y
Sbjct: 527 HMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGY 586

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C    ++    +  +ML++        YN ++  L +   ++EA  ++ ++       +A
Sbjct: 587 CISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNA 646

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLR 677
           +T  +LV  +   G      K+ C M  +  +P  +    +        K  +A  LM  
Sbjct: 647 TTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQE 706

Query: 678 FVERGHIQPKSEEH 691
              RG I P S  +
Sbjct: 707 MQVRG-IPPNSSTY 719



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 159/665 (23%), Positives = 287/665 (43%), Gaps = 64/665 (9%)

Query: 43  SDDHFMVLDSFDKYRVNREEIRRV-VLEEDEFRHP---------LVREVCRLIELRSAWS 92
           S +HF VL   D Y  N E  R V +LE  +   P         L+   C++ +L +A  
Sbjct: 16  SVEHFNVL--IDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA-- 71

Query: 93  PKLEGELRNLLRSLKPRQIC------AVLRSQADERVALQFFYWADRQWRYRHDPIVYYM 146
            KL GE+   L +L+P  I       A  +SQ  E     + Y          D + Y  
Sbjct: 72  KKLMGEIS--LVNLEPNVITYTTLIDAYCKSQCLEDAL--YMYDEMTVKSLVPDVVTYTC 127

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQK 204
           ++  L K+   + AK V R M   G+   P  FSY  L+ +  + G +  A  +   M  
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGV--VPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV 185

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
             +  ++++    +  L        A    + +    + PN +TY+ LI G+C L  +  
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNK 245

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAK 324
              L+ EM  K   P+ + Y +++    K+  + E  D+M KMV                
Sbjct: 246 GELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV---------------- 289

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
                  Q   +P+V  Y  +++G+ +  +   A  + ++M   G + N     +F+N L
Sbjct: 290 -------QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNL 342

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             +G+  EA E+          P+ + Y+ +M G  + GK S+A ++ +EM +K      
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N+LI  L + GK + ++ F       G A +   F ++I  +C++G+L  AL LL++
Sbjct: 403 VAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE 461

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      P+++T   ++  L   G +E+  +L+  ML  G  PT  T++ V+    +  R
Sbjct: 462 MKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR 521

Query: 565 VEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
            + +L + +++  +  +   + YN +I   C  G +  A  +   ++     AD  T + 
Sbjct: 522 ADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNA 581

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS-----EEADTLMLR 677
           L+  Y        A+ V  +M    + P+++     +  ++L G S     +EA  L+ +
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVE-----TYNILLGGLSAARLIKEAAGLVNQ 636

Query: 678 FVERG 682
             ERG
Sbjct: 637 MKERG 641



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 188/455 (41%), Gaps = 36/455 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  M++   K      A  + + M  +       A++ L+    + GK  +  +  
Sbjct: 366 DRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT 425

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            M Q   +AP+    NT I+       L  AL+ L  M+  G+ PN +T N L++  C  
Sbjct: 426 GMRQ-LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAA 484

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
             I+  + L+++M + G  P   ++  V+    K +R   +  + +++V           
Sbjct: 485 GEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTY 544

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               + F   G I  A  +   M   G + D++TY A+++G+C    L +A  +  QM  
Sbjct: 545 NTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLT 604

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN  +Y   L GL       EA  ++N  +E    PNA TY +++ G  + G + E
Sbjct: 605 EGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKE 664

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
              +  EM+ KGF P     N+LI    +  KM  AK+ MQE   +G   N   +  LI 
Sbjct: 665 CVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILIC 724

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G+                Y   K P+       ++   K     EA  L  +M  KG +P
Sbjct: 725 GW----------------YKLSKQPE-------LNKSLKRSYQAEAKRLFEEMNEKGFIP 761

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
              T   +     + G+  D  ++L K+  K+  +
Sbjct: 762 CENTLACISFTLAKPGKKADAQRILNKLYKKKTVQ 796


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 230/481 (47%), Gaps = 15/481 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+ + + M  +G+      +S L+ ++ R G++ NA+  L  M KA++   +   N+ I+
Sbjct: 211 AELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLIN 270

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                   + A  + + M   G+TP V+TY  LI GYC+      A K+ +EM  KG SP
Sbjct: 271 GYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISP 330

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLM----EKMVNDSNLFHD--------QGRIEEAKELV 327
           +  ++  ++  LC+   + E   L     E+ +  S + ++         G I EA  L+
Sbjct: 331 NTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLL 390

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           ++M   G +PD  TY  +++G C VG + +AK+ +  ++    K N + Y+A ++G C  
Sbjct: 391 DEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKE 450

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G+  +A        E     + + Y++++ G  RE        +++EM   G  P  V  
Sbjct: 451 GRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIY 510

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             +I    + G +  A       +++GC  NVV +T+LI G C+ G +++A  L  +  +
Sbjct: 511 TNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLV 570

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ +TY   +D L++ G +E+A +L   ML KG + T V+Y  +I  +C++G++E+
Sbjct: 571 SDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEE 629

Query: 568 LLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
             KLL  M           Y+ +I   C    L+EA K+   +L    K D      LV 
Sbjct: 630 ATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVH 689

Query: 626 S 626
            
Sbjct: 690 G 690



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 207/433 (47%), Gaps = 13/433 (3%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
             AK     M  +G+      ++ L+  Y   G+   A  V + M    ++PN       
Sbjct: 279 SAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAI 338

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I  L   N +A+A+R    M+   I P+ +TYN +I+G+C    I +A  L+DEM  KG 
Sbjct: 339 ISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGF 398

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKE 325
            PD  +Y  ++  LC   R+ E ++ ++ +  D         S L H    +GR ++A  
Sbjct: 399 VPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVS 458

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
               M + G   D+V Y  +++G  R  +      +L++M++HG +P+ V YT  ++   
Sbjct: 459 ACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHS 518

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   EA  + +   +E   PN +TY+ +++GL + G + +A  + +E +     P  +
Sbjct: 519 KAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHI 578

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
                +  L R G M+ A +     L KG     V++  LIRGFC+ G +EEA  LL  M
Sbjct: 579 TYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGM 637

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 PD +TY+TII    K   ++EA +L   ML KGL P  + Y  ++H  C  G +
Sbjct: 638 TDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGEL 697

Query: 566 EDLLKLLEKMLSK 578
           E   +L ++M+ +
Sbjct: 698 EKAFELRDEMIRR 710



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/480 (23%), Positives = 210/480 (43%), Gaps = 46/480 (9%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           RLM    +       S L+    R  +  + + +   +  A V P++ I +  +  L   
Sbjct: 85  RLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCEL 144

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
               KA   +  M+      +++ YN LI G C   RI +A+++ + +  KG   + V+Y
Sbjct: 145 KDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY 204

Query: 285 YTVMG---YLCKEKRIKEV--RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           Y        L KE   K +    +   ++ DS  F  +G ++ A   +++M++      V
Sbjct: 205 YGKFNEAELLFKEMGEKGLCANHITYSILIDS--FCRRGEMDNAIGFLDKMTKASIEFTV 262

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
             Y +++NG+C++G    AK    +M   G  P  V+YT+ ++G C+ G+  +A ++ N 
Sbjct: 263 YPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNE 322

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
              +  +PN  T++ ++ GL R   ++EA  +  EM ++   P+ V  N++I+  CR G 
Sbjct: 323 MTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGN 382

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +  A   + E + KG   +   +  LI G C  G + EA   +DD++      + + Y+ 
Sbjct: 383 ISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSA 442

Query: 520 IIDALSKNGRVEEATE-----------------------------------LMMKMLSKG 544
           ++    K GR ++A                                     L+ +M + G
Sbjct: 443 LVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHG 502

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEA 601
           L P  V Y  +I R+ + G +++   L + M+  + C      Y  +I  LC  G +++A
Sbjct: 503 LRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVD-EGCLPNVVTYTALINGLCKAGLMDKA 561



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 123/264 (46%), Gaps = 32/264 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y ++++  ++    +    +L+ M   G+  RP+A  Y  ++  +S+AG L+ A  
Sbjct: 471 DLVCYAILIDGTAREHDTRALFGLLKEMHNHGL--RPDAVIYTNMIDRHSKAGNLKEAFG 528

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +  +M      PN++     I+ L     + KA    +   ++ +TPN +TY C +    
Sbjct: 529 LWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLT 588

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               ++ A++L   M LKG     VSY  ++   C+                        
Sbjct: 589 RGGNMEKAVQLHHAM-LKGFLATTVSYNILIRGFCR-----------------------L 624

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G+IEEA +L++ M+    +PD +TY+ ++   C+   L +A K+   M   G KP+T++Y
Sbjct: 625 GKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAY 684

Query: 378 TAFLNGLCHNG---KSLEAR-EMI 397
           +  ++G C  G   K+ E R EMI
Sbjct: 685 SFLVHGCCIAGELEKAFELRDEMI 708



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 28/241 (11%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           R D ++Y  M++  SK    + A  +  +M   G  C P   +Y  L+    +AG +  A
Sbjct: 504 RPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEG--CLPNVVTYTALINGLCKAGLMDKA 561

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +      + V PN +     +  L  G  + KA++ L    L G     ++YN LI+G
Sbjct: 562 ELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQ-LHHAMLKGFLATTVSYNILIRG 620

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           +C L +I++A KL+  M      PD ++Y T++   CK                 SNL  
Sbjct: 621 FCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKR----------------SNL-- 662

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
                +EA +L + M   G  PD + Y+ +V+G C  GEL++A ++  +M   G + N V
Sbjct: 663 -----QEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHV 717

Query: 376 S 376
           +
Sbjct: 718 T 718



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 11/247 (4%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P   T S +++GL R  + ++   +  ++V     P     + +++SLC     + AK+ 
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           +       C +++V +  LI G C+   + EAL + + +     + + VTY         
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY-------- 205

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTA 584
            G+  EA  L  +M  KGL    +TY  +I  +C+ G +++ +  L+KM   S +     
Sbjct: 206 -GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP 264

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN +I   C  G    A     +++         T   L+  Y N+G    A+KV   M 
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324

Query: 645 NRNLIPD 651
            + + P+
Sbjct: 325 AKGISPN 331


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 203/428 (47%), Gaps = 28/428 (6%)

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           V P     NT         +L +     + M  AG T     Y  LI   C +    +A 
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKEL 326
           KL+  M LK      ++Y T++ +LCK                         R+EEA+EL
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCK-----------------------LNRVEEAREL 102

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           + +M++    PD +TY  +V   C+   +D A   +++M   G KP+   Y   L+GLC 
Sbjct: 103 IEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQ 161

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
             K  EAR +     ++   PN +TY+ +++GL +  ++  A ++ +EM  KG+ PT V 
Sbjct: 162 EEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVS 221

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            N LI   C++  +  AK    + +   C  NVV +T+LI G  + G ++ A  +LD M 
Sbjct: 222 YNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMV 281

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                P+  TY+ +ID   K  RV+EA +L+ +M+++G+ PTVVTY  +++  C+  ++E
Sbjct: 282 KKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLE 341

Query: 567 DLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           D  KL   M ++++C      YN ++  LC    L+ A ++  +++      DA T   L
Sbjct: 342 DAFKLFRGM-AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL 400

Query: 624 VESYLNKG 631
                  G
Sbjct: 401 AWGLTRAG 408



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 206/425 (48%), Gaps = 24/425 (5%)

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
            +K    +  K V + M   G   R   +  L+    + G    A  +L  M+       
Sbjct: 20  FAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRK 79

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
            +  +T I+ L   N++ +A   +E+M      P+ LTY  +++  C   RI DA+  ++
Sbjct: 80  AIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVE 138

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQM 330
           EM  +G  PD   Y  V+  LC+E++++E R L EKMV               K+ +N  
Sbjct: 139 EMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV---------------KQRIN-- 181

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
                 P+VVTY  ++NG C+   ++ A ++ ++M   G  P  VSY   ++G C     
Sbjct: 182 ------PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDL 235

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
           + A+++ +        PN +TY+ ++ GL + GK+  A +V+  MVKKG  P     + L
Sbjct: 236 VAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCL 295

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I   C+  ++D A K +++ + +G A  VV +  L+   C+   LE+A  L   M   + 
Sbjct: 296 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 355

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P  VTY T++ AL  + +++ A  L  +M++KG  P  +TY T+     + G+V +  +
Sbjct: 356 HPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQE 415

Query: 571 LLEKM 575
           L+EKM
Sbjct: 416 LMEKM 420



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 190/382 (49%), Gaps = 28/382 (7%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           R  R++   I Y  ++  L K    + A+ ++  MAR      P+A +Y  ++    +  
Sbjct: 72  RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA---PPDALTYGPIVERLCKTK 128

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           ++ +A+  +  M    + P+  I N  +  L    K+ +A    E+M    I PNV+TYN
Sbjct: 129 RIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYN 188

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI G C   RI+ A +L  EM  KG  P +VSY T++   CK+K +   +D+ +KMV  
Sbjct: 189 TLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS 248

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
           +                       C+P+VVTYT +++G  + G++  A ++L  M   G 
Sbjct: 249 N-----------------------CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 285

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PN  +Y+  ++G C   +  EA +++     +   P  +TY+++++ L R  KL +A  
Sbjct: 286 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 345

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           + R M ++   PT V  N L+++LC   ++DGA +   E + KGC  + + + +L  G  
Sbjct: 346 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLT 405

Query: 491 QKGDLEEALSLLDDMYLCKKDP 512
           + G + EA  L++ M L K++P
Sbjct: 406 RAGKVHEAQELMEKMKLTKRNP 427



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 171/367 (46%), Gaps = 46/367 (12%)

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG------------R 319
           M L+   P   ++ TV     K  R+++V+++ + MV         G             
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            +EA +L++ M         + Y+ ++N  C++  +++A++++++M  +   P+ ++Y  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +  LC   +  +A   +         P+A  Y+ V+ GL +E K+ EA  +  +MVK+ 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  V  N LI  LC+  +++ A +  +E   KG     V++ +LI GFC+K DL  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            + D M      P+ VTYTT+ID LSK+G+V+ A E++  M+ KG+ P V TY  +I  +
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
           C+V RV+                                 EA K+L +++         T
Sbjct: 300 CKVRRVD---------------------------------EAHKLLEQMVTQGIAPTVVT 326

Query: 620 CHVLVES 626
            ++L+ S
Sbjct: 327 YNILLNS 333



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 5/279 (1%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P A T++ V  G  + G+L +  +V + MV+ G+        +LI  LC+ G  D A K 
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           +     K      + ++++I   C+   +EEA  L++ M      PD +TY  I++ L K
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR-YAPPDALTYGPIVERLCK 126

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---T 583
             R+++A   + +M ++G+ P    Y  V+   CQ  +VE+   L EKM+ KQ+      
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV-KQRINPNVV 185

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            YN +I  LC    +E A ++  ++          + + L++ +  K   + A  V  +M
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              N +P++     + + L   GK + A  ++   V++G
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 284



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 8/240 (3%)

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M  +   P     N +     + G+++  K+  Q  +  G  +    +  LI   C+ G+
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
            +EA  LL  M L +     + Y+TII+ L K  RVEEA EL+ KM ++   P  +TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTA 612
           ++ R C+  R++D L  +E+M ++     A  YN V+  LC    +EEA  +  K+++  
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
              +  T + L+           AY++   M  +  +P      +VS   +++G  ++ D
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPT-----EVSYNTLIDGFCKKKD 234


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 242/500 (48%), Gaps = 52/500 (10%)

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           E F+ L+  Y R G++  A+ +L  M+    AP+++  NT ++       L  A + +  
Sbjct: 18  EHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGE 77

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           + L  + PNV+TY  LI  YC    ++DA+ + DEM +K   PD V+Y  +M  LCK  +
Sbjct: 78  ISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGK 137

Query: 297 IKEVRDL---MEKMVNDSNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
           ++E + +   ME++    N F           +G + EA  L  +M   G   DVV YTA
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++G  + G  + A+ M Q +      PN V+Y+A ++G C  G   +   ++   EE+ 
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV------------------- 445
             PN I YS ++ G  ++G L+EA DV+R+MV++   P                      
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317

Query: 446 ------------EINLLIQS----LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
                       E N +I S    L R G+M+ A +  ++ +++G   + VN+TS++ GF
Sbjct: 318 DLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE-EATELMMKMLSKGLVPT 548
            + G   +A ++  +M       D V Y  +I+ L K G+ E E+    M+ L  GL P 
Sbjct: 378 FKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL--GLAPD 435

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
             T+ T+I+ YC+ G + + LKLL +M S   +      N +++ LC+ G +E+   +L 
Sbjct: 436 SATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLN 495

Query: 607 KVLRTASKADASTCHVLVES 626
            +L        +T   ++++
Sbjct: 496 DMLVMGFHPTPTTHKAVLDA 515



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 200/414 (48%), Gaps = 25/414 (6%)

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
           R L   Q   I  +V  +N LI GYC    I  A++L++ M  +G +PD V+Y T+M   
Sbjct: 3   RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           CK                        G +  AK+L+ ++S +   P+V+TYT +++ +C+
Sbjct: 63  CK-----------------------IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCK 99

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
              L+ A  M  +M      P+ V+YT  +NGLC +GK  EA+ +    EE    PN  +
Sbjct: 100 SQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFS 159

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+ ++  L +EG ++EA  +   MV +G     V    L+  L + G  + A+   Q  L
Sbjct: 160 YATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLL 219

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            +    N V +++LI G C+ GD+ +   LL +M      P+ + Y++I+D  +K G + 
Sbjct: 220 EESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLN 279

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVI 589
           EA ++M KM+ + ++P V  Y T+I  Y +  +    L L ++M S+  ++     +  +
Sbjct: 280 EAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFV 339

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            NL   G +EEA ++   ++      D      +++ +   G    A+ +A  M
Sbjct: 340 NNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 159/667 (23%), Positives = 288/667 (43%), Gaps = 64/667 (9%)

Query: 43  SDDHFMVLDSFDKYRVNREEIRRV-VLEEDEFRHP---------LVREVCRLIELRSAWS 92
           S +HF VL   D Y  N E  R V +LE  +   P         L+   C++ +L +A  
Sbjct: 16  SVEHFNVL--IDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA-- 71

Query: 93  PKLEGELRNLLRSLKPRQIC------AVLRSQADERVALQFFYWADRQWRYRHDPIVYYM 146
            KL GE+   L +L+P  I       A  +SQ  E     + Y          D + Y  
Sbjct: 72  KKLMGEIS--LVNLEPNVITYTTLIDAYCKSQCLEDAL--YMYDEMTVKSLVPDVVTYTC 127

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQK 204
           ++  L K+   + AK V R M   G+   P  FSY  L+ +  + G +  A  +   M  
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGV--VPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV 185

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
             +  ++++    +  L        A    + +    + PN +TY+ LI G+C L  +  
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNK 245

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAK 324
              L+ EM  K   P+ + Y +++    K+  + E  D+M KMV                
Sbjct: 246 GELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV---------------- 289

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
                  Q   +P+V  Y  +++G+ +  +   A  + ++M   G + N     +F+N L
Sbjct: 290 -------QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNL 342

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             +G+  EA E+          P+ + Y+ +M G  + GK S+A ++ +EM +K      
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N+LI  L + GK + ++ F       G A +   F ++I  +C++G+L  AL LL++
Sbjct: 403 VAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE 461

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      P+++T   ++  L   G +E+  +L+  ML  G  PT  T++ V+    +  R
Sbjct: 462 MKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR 521

Query: 565 VEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
            + +L + +++  +  +   + YN +I   C  G +  A  +   ++     AD  T + 
Sbjct: 522 ADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNA 581

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS-----EEADTLMLR 677
           L+  Y        A+ V  +M    + P+++     +  ++L G S     +EA  L+ +
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVE-----TYNILLGGLSAARLIKEAAGLVNQ 636

Query: 678 FVERGHI 684
             ERG +
Sbjct: 637 MKERGLV 643



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/554 (22%), Positives = 238/554 (42%), Gaps = 27/554 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D +VY  +++ L K  +   A+ + +++    +      +S L+  + + G +     +L
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++  + PN+++ ++ +        L +A+  + +M    I PNV  Y  LI GY   
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            +   A+ L  EM                    K + ++E   +++  VN+       GR
Sbjct: 311 DQRGIALDLFKEM--------------------KSRGLEENNFVIDSFVNN---LKRSGR 347

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +EEA EL   M   G +PD V YT++++GF + G+   A  + Q+M       + V+Y  
Sbjct: 348 MEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNV 407

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +NGL   GK  E+        +    P++ T++ +++   +EG L  A  ++ EM   G
Sbjct: 408 LINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  +  N+L+Q LC  G+++     + + L  G         +++    +    +  L
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVIL 526

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            + D +       D  TY T+I    + G +  AT +   M+ KG++  ++TY  +IH Y
Sbjct: 527 HMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGY 586

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C    ++    +  +ML++        YN ++  L +   ++EA  ++ ++       +A
Sbjct: 587 CISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNA 646

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLR 677
           +T  +LV  +   G      K+ C M  +  +P  +    +        K  +A  LM  
Sbjct: 647 TTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQE 706

Query: 678 FVERGHIQPKSEEH 691
              RG I P S  +
Sbjct: 707 MQVRG-IPPNSSTY 719



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 187/452 (41%), Gaps = 36/452 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  M++   K      A  + + M  +       A++ L+    + GK  +  +  
Sbjct: 366 DRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT 425

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            M Q   +AP+    NT I+       L  AL+ L  M+  G+ PN +T N L++  C  
Sbjct: 426 GMRQ-LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAA 484

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
             I+  + L+++M + G  P   ++  V+    K +R   +  + +++V           
Sbjct: 485 GEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTY 544

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               + F   G I  A  +   M   G + D++TY A+++G+C    L +A  +  QM  
Sbjct: 545 NTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLT 604

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN  +Y   L GL       EA  ++N  +E    PNA TY +++ G  + G + E
Sbjct: 605 EGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKE 664

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
              +  EM+ KGF P     N+LI    +  KM  AK+ MQE   +G   N   +  LI 
Sbjct: 665 CVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILIC 724

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G+                Y   K P+       ++   K     EA  L  +M  KG +P
Sbjct: 725 GW----------------YKLSKQPE-------LNKSLKRSYQAEAKRLFEEMNEKGFIP 761

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
              T   +     + G+  D  ++L K+  K+
Sbjct: 762 CENTLACISFTLAKPGKKADAQRILNKLYKKK 793


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 227/475 (47%), Gaps = 24/475 (5%)

Query: 167 MARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           M R G   RP+A+++  L+V Y R  ++  A  +   M     A +++   T I  L   
Sbjct: 1   MVRSGW--RPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEA 58

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            ++ +A+     M      P++  Y  L+KG C+  R ++ + ++  M   G  P   +Y
Sbjct: 59  GRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAY 114

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
             V+ + C+E++ KE  +++++M                N +  +GR+ +A  ++  M  
Sbjct: 115 AAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKL 174

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            GC P+V TY A+V GFC  G++ +A  +L +M   G  P+ V+Y   + G C +G    
Sbjct: 175 RGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIES 234

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A  ++   E +    +  TY+ +++ L ++G+  +AC +   +  +G  P  V  N LI 
Sbjct: 235 AFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLIN 294

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+ GK D A KF+++ ++ GC  +   ++S I   C+    +E LS + +M      P
Sbjct: 295 GLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 354

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
            TV YT +I  L K            +M+S G  P VVTY T +  YC  GR+ +   +L
Sbjct: 355 STVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVL 414

Query: 573 EKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
            +M SK        AYN +++   S G  + A  IL ++   AS  +  T  +L+
Sbjct: 415 MEM-SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 468



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 240/533 (45%), Gaps = 42/533 (7%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           +LR M   G      A++ ++    R  K + A  +L  M +  +AP ++ C   I+   
Sbjct: 98  MLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYC 157

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              +++ ALR LE M+L G  PNV TYN L++G+C+  ++  A+ L+++M   G +PD V
Sbjct: 158 KEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAV 217

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           +Y  ++   C +                       G IE A  L+  M   G I D  TY
Sbjct: 218 TYNLLIRGQCID-----------------------GHIESAFRLLRLMEGDGLIADQYTY 254

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
            A++N  C+ G  DQA  +   +   G KPN V++ + +NGLC +GK+  A + +     
Sbjct: 255 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVS 314

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
              TP+  TYS  +  L +     E    + EM++K   P+ V   ++I  L +E     
Sbjct: 315 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL 374

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
             +   E ++ GC  +VV +T+ +R +C +G L EA ++L +M       DT+ Y T++D
Sbjct: 375 VARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMD 434

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
             +  G+ + A  ++ +M S   VP   TY  ++    ++  VED+L L    + K    
Sbjct: 435 GHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIEL 494

Query: 583 T-------------------AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           T                    Y+ ++E     G  EEA  ++  +   +   +      L
Sbjct: 495 TDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTAL 554

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
           V  +      L A+ + C M     IP L   + +   LI EG++++A  + +
Sbjct: 555 VTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFM 607



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 216/451 (47%), Gaps = 35/451 (7%)

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M  +G  P+  T+N LI GYC  +++  A  L D+MPL+G + D VSY T++  LC    
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLC---- 56

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                              + GRI+EA EL  +M Q    PD+  Y A+V G C     +
Sbjct: 57  -------------------EAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGE 93

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +   ML++M   G +P+T +Y A ++  C   K+ EA EM+    E+   P  +T + V+
Sbjct: 94  EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 153

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
           +   +EG++S+A  V+  M  +G  P     N L+Q  C EGK+  A   + +   + C 
Sbjct: 154 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM--RACG 211

Query: 477 VN--VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           VN   V +  LIRG C  G +E A  LL  M       D  TY  +I+AL K+GR ++A 
Sbjct: 212 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 271

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIEN 591
            L   + ++G+ P  VT+ ++I+  C+ G+ +   K LEKM+S   C      Y+  IE+
Sbjct: 272 SLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSA-GCTPDTYTYSSFIEH 330

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC     +E    +G++L+   K       +++   L +    L  +    M +    PD
Sbjct: 331 LCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPD 390

Query: 652 LKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +           +EG+  EA+ +++   + G
Sbjct: 391 VVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 421



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/442 (22%), Positives = 189/442 (42%), Gaps = 29/442 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y +++         + A R+LRLM   G+      ++ L+ A  + G+   A  + 
Sbjct: 215 DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLF 274

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             ++   + PN +  N+ I+ L    K   A +FLE+M  AG TP+  TY+  I+  C +
Sbjct: 275 DSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 334

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
              ++ +  I EM  K   P  V+Y  V+  L KE+    V     +MV+          
Sbjct: 335 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 394

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                 +  +GR+ EA+ ++ +MS+ G   D + Y  +++G   +G+ D A  +L+QM  
Sbjct: 395 TTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTS 454

Query: 368 HGCKPNTVSYTAFLNGLCHN--------------GKSLEARE---MINTSEEEWWTPNAI 410
               PN  +Y   L  L                  K++E  +   + +  ++  + PN+ 
Sbjct: 455 VASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSG 514

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TYS ++ G   +G+  EA  +V  M +            L+   C+  +   A   +   
Sbjct: 515 TYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSM 574

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           +  G    ++++  L+ G   +G  ++A  +  +       PD + +  IID L K G  
Sbjct: 575 IQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHS 634

Query: 531 EEATELMMKMLSKGLVPTVVTY 552
           + + E+++ +      P+  TY
Sbjct: 635 DISREMIIMLERMNCRPSHQTY 656


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 239/498 (47%), Gaps = 30/498 (6%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +   A+ + S M ++   P+++     ++V+    K    +   + +Q+ G++ ++ T N
Sbjct: 51  QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCN 110

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            L+  +C   +   A   + ++   G  PD  ++ +++   C   RI             
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRI------------- 157

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                     EEA  +VNQM +MG  PDVV YT +++  C+ G +D A  +  QM ++G 
Sbjct: 158 ----------EEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGI 207

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P+ V YT+ +NGLC++G+  +A  ++    +    P+ IT++ ++    +EGKL +A +
Sbjct: 208 RPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKE 267

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +  EM++    P       LI  LC EG++D A++       KGC  +VV +TSLI GFC
Sbjct: 268 LYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFC 327

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +   +E+A+ +  +M       +T+TYTT+I      G+   A E+   M+S+G+ P + 
Sbjct: 328 KCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIR 387

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQ------KCRTAYNQVIENLCSFGYLEEAGKI 604
           TY  ++H  C  G+V   L + E M  ++        RT YN ++  LC  G LE+A  +
Sbjct: 388 TYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRT-YNVLLHGLCYNGKLEKALMV 446

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
            G + +        T  ++++     G    A  + C + ++ + P++     +   L  
Sbjct: 447 FGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFR 506

Query: 665 EGKSEEADTLMLRFVERG 682
           EG   EA  L  +  E G
Sbjct: 507 EGLMLEAHVLFRKMKEDG 524



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 216/458 (47%), Gaps = 54/458 (11%)

Query: 172 IECRPEA----FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           +E RP      F+ L+   ++  K    + +   +Q   V+ +L  CN  ++     ++ 
Sbjct: 63  VESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQP 122

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
             A  FL ++   G  P++ T+  LI G+C  +RI++A+ ++++M   G  PD V Y T+
Sbjct: 123 CLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTI 182

Query: 288 MGYLCKEKRIKEVRDLMEKMVN------------------------DSNL---------- 313
           +  LCK   +     L  +M N                        D++L          
Sbjct: 183 IDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKI 242

Query: 314 -------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                        F  +G++ +AKEL N+M QM   P++ TYT+++NG C  G LD+A++
Sbjct: 243 KPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQ 302

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           M   M   GC P+ V+YT+ +NG C   K  +A ++     ++  T N ITY+ ++ G  
Sbjct: 303 MFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFG 362

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK---GCAV 477
             GK + A +V   MV +G  P     N+L+  LC  GK++ A    ++   +   G   
Sbjct: 363 LVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPP 422

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           N+  +  L+ G C  G LE+AL +  DM     D   +TYT II  + K G+V++A  L 
Sbjct: 423 NIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLF 482

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
             + SKG+ P VVTY T+I    + G + +   L  KM
Sbjct: 483 CSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKM 520



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 176/373 (47%), Gaps = 30/373 (8%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           + D ++Y  +++ L K      A  +   M   GI  RP+   Y  L+     +G+ R+A
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGI--RPDVVMYTSLVNGLCNSGRWRDA 230

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +L  M K  + P+++  N  I   V   KL  A      M    I PN+ TY  LI G
Sbjct: 231 DLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLING 290

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
            C   R+ +A ++   M  KGC PD V+Y +++   CK K                    
Sbjct: 291 LCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCK-------------------- 330

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
              ++E+A ++  +MSQ G   + +TYT ++ GF  VG+ + A+++   M   G  PN  
Sbjct: 331 ---KVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIR 387

Query: 376 SYTAFLNGLCHNG---KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           +Y   L+ LC+NG   K+L   E +   E +   PN  TY+V++HGL   GKL +A  V 
Sbjct: 388 TYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVF 447

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            +M K+      +   ++IQ +C+ GK+  A        +KG   NVV +T++I G  ++
Sbjct: 448 GDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFRE 507

Query: 493 GDLEEALSLLDDM 505
           G + EA  L   M
Sbjct: 508 GLMLEAHVLFRKM 520



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 164/340 (48%), Gaps = 27/340 (7%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           AL  F   +  +  R D ++Y  ++  L  +   + A  +LR M +R I+     F+ L+
Sbjct: 195 ALSLFNQME-NYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALI 253

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
            A+ + GKL +A  + + M + ++APN+    + I+ L +  +L +A +    M+  G  
Sbjct: 254 DAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCF 313

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+V+ Y  LI G+C   +++DA+K+  EM  KG + + ++Y T++               
Sbjct: 314 PDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLI--------------- 358

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                     F   G+   A+E+   M   G  P++ TY  +++  C  G++++A  + +
Sbjct: 359 --------QGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFE 410

Query: 364 QMYHH---GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
            M      G  PN  +Y   L+GLC+NGK  +A  +    ++       ITY++++ G+ 
Sbjct: 411 DMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMC 470

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           + GK+ +A ++   +  KG  P  V    +I  L REG M
Sbjct: 471 KAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLM 510



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 34/290 (11%)

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           NGL H+ +  EA ++ +   E    P+ I ++ +++ + +  K     ++ + +   G  
Sbjct: 45  NGL-HSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVS 103

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
                 NLL+   C+  +   A  F+ + +  G   ++  FTSLI GFC    +EEA+S+
Sbjct: 104 NDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSM 163

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           ++ M      PD V YTTIID+L KNG V+ A  L  +M + G+ P VV Y ++++  C 
Sbjct: 164 VNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCN 223

Query: 562 VGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
            GR  D   LL  M+ ++                                  K D  T +
Sbjct: 224 SGRWRDADLLLRGMMKRK---------------------------------IKPDVITFN 250

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
            L+++++ +G  L A ++   M   ++ P++     +   L +EG+ +EA
Sbjct: 251 ALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEA 300


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 156/654 (23%), Positives = 291/654 (44%), Gaps = 79/654 (12%)

Query: 69  EEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADE-RVALQF 127
           EE++ R   V  +C ++  + +W  K+     ++  +L+P  +  VL +  D+ ++AL+F
Sbjct: 34  EENDCR--FVSLLCDIVRGKQSW--KVAFNDASISSTLRPHHVEQVLMNTLDDAKLALRF 89

Query: 128 FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE-AFSYLMVAY 186
           F +        H    Y +M+  L  ++L   A  +L  +  R  E  P+  FS+ + +Y
Sbjct: 90  FNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLR--ESHPKCVFSHFLDSY 147

Query: 187 SR------------------AGKLRNAMYVLSMM-------------------------- 202
            R                  + ++ +A+ ++ +M                          
Sbjct: 148 KRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFI 207

Query: 203 ---------QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
                      A V P+   C+  +  +       +A   +  M+  G   +++TYN LI
Sbjct: 208 TVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLI 267

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-- 311
            G C   R+ +A+++   +  KG + D V+Y T++   C+ ++ +    LM++MV     
Sbjct: 268 HGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFS 327

Query: 312 ----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                     +    QG+I++A ELV ++ + G +P++  Y A++N  C+ G+LD+A+ +
Sbjct: 328 PTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELL 387

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
              M     +PN ++Y+  ++  C +G+   A    +   ++        Y+ +++G  +
Sbjct: 388 YSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCK 447

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            G LS A  +  EM  KG  PT      LI   C++ ++  A K   + ++ G   NV  
Sbjct: 448 FGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYT 507

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           FT+LI G C    + EA  L D++   K  P  VTY  +I+   ++G++++A EL+  M 
Sbjct: 508 FTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMH 567

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYL 598
            KGLVP   TYR +I   C  GRV      ++  L KQ  +     Y+ ++   C  G L
Sbjct: 568 QKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDD-LHKQNVKLNEMCYSALLHGYCQEGRL 626

Query: 599 EEAGKILGKVLRTASKADASTCH-VLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            EA     ++++     D   CH VL++  L +      + +   M ++ L PD
Sbjct: 627 MEALSASCEMIQRGINMDL-VCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPD 679



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 153/630 (24%), Positives = 266/630 (42%), Gaps = 95/630 (15%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++    + +  +   +++  M   G      A S L+    + GK+ +A  ++
Sbjct: 294 DVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELV 353

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + +    PNL + N  I+ L  G  L KA      M L  + PN +TY+ LI  +C  
Sbjct: 354 VKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRS 413

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R+  AI   D M   G      +Y +++   CK                        G 
Sbjct: 414 GRLDVAISYFDRMIQDGIGETVYAYNSLINGQCK-----------------------FGD 450

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +  A+ L  +M+  G  P   T+T++++G+C+  ++ +A K+  +M  +G  PN  ++TA
Sbjct: 451 LSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTA 510

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++GLC   K  EA E+ +   E    P  +TY+V++ G  R+GK+ +A +++ +M +KG
Sbjct: 511 LISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKG 570

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P       LI  LC  G++  AK F+ +   +   +N + +++L+ G+CQ+G L EAL
Sbjct: 571 LVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEAL 630

Query: 500 S-----------------------------------LLDDMYLCKKDPDTVTYTTIIDAL 524
           S                                   LL DM+     PD V YT++ID  
Sbjct: 631 SASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTY 690

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--------- 575
           SK G  ++A E    M+++   P VVTY  +++  C+ G ++    L ++M         
Sbjct: 691 SKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNS 750

Query: 576 ---------LSKQ------------------KCRTAYNQVIENLCSFGYLEEAGKILGKV 608
                    L+K+                       +N +I   C  G   EA K+L ++
Sbjct: 751 ITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEM 810

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
                  D  T   L+  Y   G    + K+   M NR L PDL     +     + G+ 
Sbjct: 811 TENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGEL 870

Query: 669 EEADTLMLRFVERGHIQPKSEEHLQRQRVF 698
           ++A  L    + RG I P ++   ++  +F
Sbjct: 871 DKAFELRDDMLRRG-IIPDNKYLQKKGTIF 899



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 239/523 (45%), Gaps = 28/523 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + I Y ++++   ++     A      M + GI     A++ L+    + G L  A  
Sbjct: 397 RPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAES 456

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M    V P      + I       ++ KA +   +M   GITPNV T+  LI G C
Sbjct: 457 LFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLC 516

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
             +++ +A +L DE+  +   P +V+Y  ++   C++                       
Sbjct: 517 STNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRD----------------------- 553

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G+I++A EL+  M Q G +PD  TY  +++G C  G + +AK  +  ++    K N + Y
Sbjct: 554 GKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCY 613

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +A L+G C  G+ +EA        +     + + ++V++ G  ++       D++++M  
Sbjct: 614 SALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHD 673

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P  V    +I +  +EG    A +     + + C  NVV +T+L+ G C+ G+++ 
Sbjct: 674 QGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDR 733

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A  L   M      P+++TY   +D L+K G ++EA  L   ML KGL+   VT+  +I 
Sbjct: 734 AGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIR 792

Query: 558 RYCQVGRVEDLLKLLEKMLSK---QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
            +C++GR  +  K+L +M        C T Y+ +I   C  G +  + K+   +L    +
Sbjct: 793 GFCKLGRFHEATKVLSEMTENGIFPDCVT-YSTLIYEYCRSGNVGASVKLWDTMLNRGLE 851

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
            D    ++L+      G    A+++   M  R +IPD K  +K
Sbjct: 852 PDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNKYLQK 894



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 190/409 (46%), Gaps = 22/409 (5%)

Query: 141 PIVYYM--MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           P VY    ++  L  T     A  +   +  R I+     ++ L+  Y R GK+  A  +
Sbjct: 503 PNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFEL 562

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L  M +  + P+       I  L    +++KA  F++ +    +  N + Y+ L+ GYC 
Sbjct: 563 LEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQ 622

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
             R+ +A+    EM  +G + D V +  ++    K+   K   DL++ M +         
Sbjct: 623 EGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVI 682

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                + +  +G  ++A E  + M    C P+VVTYTA++NG C+ GE+D+A  + ++M 
Sbjct: 683 YTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQ 742

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                PN+++Y  FL+ L   G   EA  + + +  +    N +T+++++ G  + G+  
Sbjct: 743 AANVPPNSITYGCFLDNLTKEGNMKEAIGL-HHAMLKGLLANTVTHNIIIRGFCKLGRFH 801

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA  V+ EM + G FP  V  + LI   CR G +  + K     LN+G   ++V +  LI
Sbjct: 802 EATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLI 861

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
            G C  G+L++A  L DDM      PD          L K G + EAT 
Sbjct: 862 YGCCVNGELDKAFELRDDMLRRGIIPDN-------KYLQKKGTIFEATH 903



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 116/496 (23%), Positives = 218/496 (43%), Gaps = 63/496 (12%)

Query: 215 NTAIHVLVVGNKLAKAL--RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
           N+ +H L++     K +   FL+  +    + + L +N L++ Y    RI DA+ ++  M
Sbjct: 123 NSLLHTLLLRESHPKCVFSHFLDSYKRCKFS-STLGFNLLVQNYVLSSRIFDAVVIVKLM 181

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQ 332
                 P+  +   ++  L K ++   V +L ++ VN                       
Sbjct: 182 FANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVN----------------------- 218

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G  PD  T +AVV   C + +  +AK+ ++ M  +G   + V+Y   ++GLC   +  E
Sbjct: 219 AGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSE 278

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A E+  +   +    + +TY  ++ G  R  +      ++ EMV+ GF PT   ++ L+ 
Sbjct: 279 AVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVD 338

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            L ++GK+D A + + +    G   N+  + +LI   C+ GDL++A  L  +M L    P
Sbjct: 339 GLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRP 398

Query: 513 DTVTYTTIIDALSKNGRVE-----------------------------------EATELM 537
           + +TY+ +ID+  ++GR++                                    A  L 
Sbjct: 399 NGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLF 458

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSF 595
           ++M +KG+ PT  T+ ++I  YC+  +V+   KL  KM+        Y    +I  LCS 
Sbjct: 459 IEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCST 518

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
             + EA ++  +++    K    T +VL+E Y   G    A+++   M  + L+PD    
Sbjct: 519 NKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTY 578

Query: 656 KKVSERLILEGKSEEA 671
           + +   L   G+  +A
Sbjct: 579 RPLISGLCSTGRVSKA 594


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 237/503 (47%), Gaps = 27/503 (5%)

Query: 127 FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY 186
           F +   R+  +  +   Y  ++ +L ++ LC+ A  + R M   G++   + FS LMVA 
Sbjct: 180 FAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVAT 239

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
            +         +L  M+   + PN+      I VL    ++ +A R ++RM+  G  P+V
Sbjct: 240 GKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDV 299

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           +TY  LI   C   ++ DA++L  +M      PD+V+Y T++                  
Sbjct: 300 VTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITML------------------ 341

Query: 307 MVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                + F D G +   KE  ++M   G  PDV+T+T +VN  C+ G +D+A  +L  M 
Sbjct: 342 -----DKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMR 396

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  PN  +Y   ++GL    +  +A ++ N  E     P A TY + +    + G+  
Sbjct: 397 KQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSD 456

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A +   +M  +G  P  V  N  + SL   G++  AK       + G A + V +  ++
Sbjct: 457 KALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMM 516

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           + + + G ++EA+ LL DM   + +PD +   ++I+ L K GRV+EA ++  ++    L 
Sbjct: 517 KCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLA 576

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGK 603
           PTVVTY T+I    + G+V+  ++L   M +   C      +N +++ LC    ++ A K
Sbjct: 577 PTVVTYNTLIAGLGKEGQVQRAMELFASM-TGNGCPPNTITFNTILDCLCKNDEVDLALK 635

Query: 604 ILGKVLRTASKADASTCHVLVES 626
           +L K+       D  T + ++  
Sbjct: 636 MLYKMTTMNCMPDVLTFNTIIHG 658



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 233/529 (44%), Gaps = 54/529 (10%)

Query: 176  PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
            P   +Y  L+    + G+++ AM + + M      PN +  NT +  L   +++  AL+ 
Sbjct: 577  PTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKM 636

Query: 234  LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
            L +M      P+VLT+N +I G     R+ DAI L  +M  K  +PD V+  T++  + K
Sbjct: 637  LYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVK 695

Query: 294  EKRIKEV--------------------RDLMEKMVNDSN-----LFHDQ---GRI----- 320
               +++                      DLM  ++  +      LF D+   GR+     
Sbjct: 696  NGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGS 755

Query: 321  ----------EEAKELVNQ------MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                      +  + LV Q        ++G  P + +Y  ++ GF  V   + A  +  +
Sbjct: 756  VLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTE 815

Query: 365  MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
            M + GC P+  +Y   L+    +GK  E  E+          PN IT+++++  L +   
Sbjct: 816  MKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNS 875

Query: 425  LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
            L +A D+  ++V   F PTP     L+  L + G+++ AK+  +E ++ GC  N   +  
Sbjct: 876  LDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNI 935

Query: 485  LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
            LI GF + GD+  A  L   M      PD  +YT+++  L + GRV++A     K+   G
Sbjct: 936  LINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTG 995

Query: 545  LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAG 602
            L    + Y  +I    +  R+E+ L L ++M S+        YN +I NL   G +E+AG
Sbjct: 996  LYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAG 1055

Query: 603  KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            K+  ++     + +  T + L+  Y   G    AY V  RM      P+
Sbjct: 1056 KLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPN 1104



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 137/616 (22%), Positives = 252/616 (40%), Gaps = 84/616 (13%)

Query: 105 SLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           +L  +++ AVL S  D   A  +F                  M  ++  T+ C     +L
Sbjct: 88  ALSSKEVMAVLNSILDPTDAFSYFNSVAE-------------MPFVVHTTETCNHMLEIL 134

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           R+  R G                      + + V ++MQ   +  +L         L + 
Sbjct: 135 RIHRRVG----------------------DMVVVFNLMQNQIIKRDLNTYLIIFKGLFIR 172

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             L +      +M+ AG   N  +YN LI         ++A+++   M L+G  P   ++
Sbjct: 173 GGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTF 232

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVN---DSNLF---------HDQGRIEEAKELVNQMSQ 332
             +M    K +  + V+ L+E+M +     N++            GRI+EA  ++ +M  
Sbjct: 233 SALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMED 292

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQA---------------------------------- 358
            GC PDVVTYT +++  C  G+LD A                                  
Sbjct: 293 DGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGR 352

Query: 359 -KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
            K+   +M   G  P+ +++T  +N LC  G   EA  +++   ++   PN  TY+ ++ 
Sbjct: 353 VKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLIS 412

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           GL R  +L +A D+   M   G  PT     L I    + G+ D A +  ++   +G A 
Sbjct: 413 GLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAP 472

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           N+V   + +    + G L EA  + + +      PD+VTY  ++   SK G+V+EA EL+
Sbjct: 473 NIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELL 532

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSF 595
             M      P ++   ++I+   + GRV++  K+  ++   +   T   YN +I  L   
Sbjct: 533 SDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKE 592

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
           G ++ A ++   +       +  T + +++         LA K+  +M   N +PD+   
Sbjct: 593 GQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTF 652

Query: 656 KKVSERLILEGKSEEA 671
             +   L++E +  +A
Sbjct: 653 NTIIHGLVIEKRVSDA 668



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 120/529 (22%), Positives = 231/529 (43%), Gaps = 52/529 (9%)

Query: 142  IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
            + Y  ++  L K    Q A  +   M   G       F+ ++    +  ++  A+ +L  
Sbjct: 580  VTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYK 639

Query: 202  MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
            M      P++L  NT IH LV+  +++ A+    +M+   +TP+ +T   L+ G      
Sbjct: 640  MTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGL 698

Query: 262  IKDAIKLIDEMPLK-GCSPDKVSYYTVMG------------------------------- 289
            ++DA K+ ++   + G   D+  +  +MG                               
Sbjct: 699  MEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLM 758

Query: 290  ----YLCKEKR--------IKEVRDLMEKMVNDSNLFHDQGRI-----EEAKELVNQMSQ 332
                 LCK K+        I+  ++L  K   +S  F  +G +     E A  L  +M  
Sbjct: 759  PIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKN 818

Query: 333  MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
             GC PDV TY  +++   + G++++  ++ +QM    CKPNT+++   +  L  +    +
Sbjct: 819  AGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDK 878

Query: 393  AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
            A ++        ++P   TY  ++ GL + G+L EA ++  EMV  G  P     N+LI 
Sbjct: 879  ALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILIN 938

Query: 453  SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
               + G ++ A +  +  + +G   ++ ++TSL+   C+ G +++AL   + +       
Sbjct: 939  GFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYL 998

Query: 513  DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
            D++ Y  +ID L ++ R+EEA  L  +M S+G+ P + TY ++I      G VE   KL 
Sbjct: 999  DSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLY 1058

Query: 573  EKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            E++  +  +     YN +I      G  + A  +  +++      +  T
Sbjct: 1059 EELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGT 1107



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 155/330 (46%), Gaps = 12/330 (3%)

Query: 203  QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            ++  V P L   N  I   +  +    A      M+ AG  P+V TYN L+  +    +I
Sbjct: 782  KELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKI 841

Query: 263  KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----------- 311
             +  +L ++M    C P+ +++  ++  L K   + +  DL   +V+             
Sbjct: 842  NELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPL 901

Query: 312  -NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
             +     GR+EEAKEL  +M   GC P+   Y  ++NGF + G+++ A ++ ++M   G 
Sbjct: 902  LDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI 961

Query: 371  KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            +P+  SYT+ +  LC  G+  +A       ++     ++I Y++++ GL R  ++ EA  
Sbjct: 962  RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021

Query: 431  VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
            +  EM  +G  P     N LI +L   G ++ A K  +E    G   NV  + +LIRG+ 
Sbjct: 1022 LYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYS 1081

Query: 491  QKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
              G+ + A ++   M +    P+T T+  +
Sbjct: 1082 MSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 128/585 (21%), Positives = 243/585 (41%), Gaps = 73/585 (12%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
            D + Y MM++  SK      A  +L  M+    +C P+    + L+    +AG++  A  
Sbjct: 508  DSVTYNMMMKCYSKAGQVDEAIELLSDMSEN--QCEPDIIVINSLINTLYKAGRVDEAWK 565

Query: 198  VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            +   ++   +AP ++  NT I  L    ++ +A+     M   G  PN +T+N ++   C
Sbjct: 566  MFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLC 625

Query: 258  DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
                +  A+K++ +M    C PD +++ T++  L  EK                      
Sbjct: 626  KNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEK---------------------- 663

Query: 318  GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH---------- 367
             R+ +A  L +QM +M   PD VT   ++ G  + G ++ A K+ +   H          
Sbjct: 664  -RVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRF 721

Query: 368  ---------------------------HGCKPNTVSYTAFLNGLCHNGKSLEAREM-INT 399
                                         CK  +V     +  LC + ++L A+ + I  
Sbjct: 722  WEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSV-LMPIIKVLCKHKQALVAQSVFIRF 780

Query: 400  SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
            ++E    P   +Y+ ++ G         A ++  EM   G  P     NLL+ +  + GK
Sbjct: 781  TKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGK 840

Query: 460  MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
            ++   +  ++ +   C  N +    +I    +   L++AL L  D+      P   TY  
Sbjct: 841  INELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGP 900

Query: 520  IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
            ++D L K+GR+EEA EL  +M+  G  P    Y  +I+ + + G V    +L ++M+ ++
Sbjct: 901  LLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMV-RE 959

Query: 580  KCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
              R    +Y  ++  LC  G +++A     K+ +T    D+   +++++          A
Sbjct: 960  GIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEA 1019

Query: 637  YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM--LRFV 679
              +   M +R + PDL     +   L + G  E+A  L   L+F+
Sbjct: 1020 LTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFI 1064



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 178/415 (42%), Gaps = 38/415 (9%)

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
           RDL   ++    LF  +G + +      +M + G   +  +Y  +++   + G   +A +
Sbjct: 157 RDLNTYLIIFKGLFI-RGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALE 215

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           M ++M   G KP+  +++A +        +   + ++   E     PN  TY++ +  L 
Sbjct: 216 MYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLG 275

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA----------------- 463
           R G++ EAC +++ M   G  P  V   +LI +LC  GK+D A                 
Sbjct: 276 RAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRV 335

Query: 464 ------------------KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
                             K+F  E    G A +V+ FT L+   C+ G+++EA  LLD M
Sbjct: 336 TYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVM 395

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P+  TY T+I  L +  R+++A +L   M + G+VPT  TY   I  Y + GR 
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRS 455

Query: 566 EDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           +  L+  EKM  +       A N  + +L   G L EA  I  ++       D+ T +++
Sbjct: 456 DKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMM 515

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           ++ Y   G    A ++   M      PD+ +   +   L   G+ +EA  +  R 
Sbjct: 516 MKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRL 570



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 159/375 (42%), Gaps = 9/375 (2%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           R+ +   + N M       D+ TY  +  G    G L Q      +M   G   N  SY 
Sbjct: 139 RVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYN 198

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM--HGLRREGKLSEACDVVREMV 436
             ++ L  +G   EA EM      E   P+  T+S +M   G RR+ +  ++  ++ EM 
Sbjct: 199 GLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKS--LLEEME 256

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
             G  P      + I+ L R G++D A + M+   + GC  +VV +T LI   C  G L+
Sbjct: 257 SLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLD 316

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +A+ L   M      PD VTY T++D  S  G +    E   +M + G  P V+T+  ++
Sbjct: 317 DAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILV 376

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +  C+ G +++   LL+ M  KQ        YN +I  L     L++A  +   +     
Sbjct: 377 NALCKAGNIDEAFHLLDVM-RKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGV 435

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
              A T  + ++ Y   G    A +   +M  R + P++  C      L   G+  EA  
Sbjct: 436 VPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKV 495

Query: 674 LMLRFVERGHIQPKS 688
           +  R    G + P S
Sbjct: 496 IFNRLKSNG-LAPDS 509



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 125/274 (45%), Gaps = 29/274 (10%)

Query: 111  ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
            I  +++S + ++ AL  FY       +   P  Y  +L+ L K+   + AK +   M   
Sbjct: 867  IANLVKSNSLDK-ALDLFYDL-VSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDY 924

Query: 171  GIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
            G  CRP    ++ L+  + + G +  A  +   M +  + P+L    + +  L    ++ 
Sbjct: 925  G--CRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVD 982

Query: 229  KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
             AL + E+++  G+  + + YN +I G    HRI++A+ L DEM  +G +PD  +Y +++
Sbjct: 983  DALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLI 1042

Query: 289  GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
              L                          G +E+A +L  ++  +G  P+V TY A++ G
Sbjct: 1043 LNLGV-----------------------AGMVEQAGKLYEELQFIGLEPNVFTYNALIRG 1079

Query: 349  FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
            +   G  D A  + ++M   GC PNT ++    N
Sbjct: 1080 YSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/525 (27%), Positives = 248/525 (47%), Gaps = 59/525 (11%)

Query: 167 MARRGI-ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           MAR G  +  P   +Y  L+    RAG+L      L  + K     + +     +  L  
Sbjct: 80  MARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCA 139

Query: 224 GNKLAKALRF-LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP---LKGCSP 279
             + + A+   L RM   G  P+V +YN L+KG CD +R ++A++L+  M      G  P
Sbjct: 140 DKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPP 199

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D VSY TV+    KE        +  K+   +        +++A E++N M + G +PD 
Sbjct: 200 DVVSYNTVLNGFFKE-------GIQTKLTAQA--------MDKAMEVLNTMVKNGVMPDC 244

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           +TY ++++G+C  G+  +A   L++M   G +PN V+Y++ +N LC NG+S EAR++ ++
Sbjct: 245 MTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS 304

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             +    P+  TY  ++ G  +EG++ E+  +   MV+ G  P  +  N LI   C  GK
Sbjct: 305 MTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 364

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           MD A K +   ++ G   ++V + +LI G+C+   +++AL+L  +M      P+ +TY  
Sbjct: 365 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 424

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-LSK 578
           I+  L    R   A EL + +   G    + TY  ++H  C+    ++ L++ + + L+ 
Sbjct: 425 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 484

Query: 579 QKCRT-AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
            +  T  +N +I  L   G ++EA     K L  A  A+                     
Sbjct: 485 LQLETRTFNIMIGALLKCGRMDEA-----KDLFAAHSANG-------------------- 519

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                     L+PD++    ++E LI +G  EE D L L   E G
Sbjct: 520 ----------LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 554



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 197/421 (46%), Gaps = 31/421 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMAR-RGIECRPEAFSYLMV--AYSRAG------ 190
           D   Y  +L+ L      Q A  +L +MA  RG    P+  SY  V   + + G      
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLT 221

Query: 191 --KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
              +  AM VL+ M K  V P+ +  N+ +H      +  +A+  L++M+  G+ PNV+T
Sbjct: 222 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 281

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           Y+ L+   C   R  +A K+ D M  +G  PD  +Y T++   CKE R+ E   L + MV
Sbjct: 282 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMV 341

Query: 309 NDS--------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                      N   D     G+++EA +L+  M  +G  PD+VTY  ++NG+CRV  +D
Sbjct: 342 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 401

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
            A  + ++M   G  PN ++Y   L GL H  ++  A+E+  +  +        TY++++
Sbjct: 402 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 461

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
           HGL +     EA  + + +            N++I +L + G+MD AK         G  
Sbjct: 462 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 521

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD----PDTVTYTTIIDALSKNGRVEE 532
            +V  ++ +     ++G LEE    LDD++L  ++     D+    +I+  L + G +  
Sbjct: 522 PDVRTYSLMAENLIEQGSLEE----LDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITR 577

Query: 533 A 533
           A
Sbjct: 578 A 578



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 156/318 (49%), Gaps = 19/318 (5%)

Query: 328 NQMSQMGC---IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           N+M++ G     P V TY  ++   CR G LD     L  +   G + + +++T  L GL
Sbjct: 78  NRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGL 137

Query: 385 CHNGKSLEAREMI-NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK---GF 440
           C + ++ +A +++     E    P+  +Y+ ++ GL  E +  EA +++  M      G 
Sbjct: 138 CADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGS 197

Query: 441 FPTPVEINLLIQSLCREG--------KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            P  V  N ++    +EG         MD A + +   +  G   + + + S++ G+C  
Sbjct: 198 PPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 257

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G  +EA+  L  M     +P+ VTY+++++ L KNGR  EA ++   M  +GL P + TY
Sbjct: 258 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATY 317

Query: 553 RTVIHRYCQVGRV---EDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           RT++  +C+ GRV   E L  L+ ++  K    T YN +I+  C  G ++EA K+L  ++
Sbjct: 318 RTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIIT-YNTLIDGCCLAGKMDEATKLLASMV 376

Query: 610 RTASKADASTCHVLVESY 627
               K D  T   L+  Y
Sbjct: 377 SVGVKPDIVTYGTLINGY 394



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 148/326 (45%), Gaps = 23/326 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K      A+++   M +RG+E     +  L+  + + G++  +  +  +
Sbjct: 280 VTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDL 339

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  V P+++  NT I    +  K+ +A + L  M   G+ P+++TY  LI GYC + R
Sbjct: 340 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 399

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + DA+ L  EM   G SP+ ++Y  ++                        LFH + R  
Sbjct: 400 MDDALALFKEMVSSGVSPNIITYNIIL----------------------QGLFHTR-RTA 436

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            AKEL   +++ G   ++ TY  +++G C+    D+A +M Q +     +  T ++   +
Sbjct: 437 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 496

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
             L   G+  EA+++          P+  TYS++   L  +G L E  D+   M + G  
Sbjct: 497 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 556

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFM 467
                +N +++ L + G +  A  ++
Sbjct: 557 ADSRMLNSIVRKLLQRGDITRAGTYL 582


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/536 (24%), Positives = 244/536 (45%), Gaps = 30/536 (5%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR-RGIECRPEAFSYL 182
           A     W   ++    + + Y  +++        + A  +L +MA  +G+ C P+  SY 
Sbjct: 249 ATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYN 308

Query: 183 MV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
            V   + R G++  A  +   M    + P+++  NT I  L     + +A    ++M   
Sbjct: 309 TVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDK 368

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G+ P+  TYNCLI GY    + K+ ++L++EM      PD   Y  ++ YLCK  R  E 
Sbjct: 369 GVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEA 428

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD---- 356
           R++ + ++           I+EA  + ++M Q G  P+VV Y A+++  C++G +D    
Sbjct: 429 RNIFDSVIRKG--IKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAIL 486

Query: 357 -------------------QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
                              +A++++ +M   G + + V +   +  LC  G+ +EA+ +I
Sbjct: 487 KFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLI 546

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
                    P+ I+Y+ ++ G    G+  EA  ++  MV  G  P     N L+   C+ 
Sbjct: 547 ELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKA 606

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
            ++D A   ++E L  G   +VV + +++ G  Q G   EA  L  +M   +   D  TY
Sbjct: 607 RRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTY 666

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
             I++ L KN  V+EA ++   + SKGL   ++T+  +I    + G+ ED + L   + +
Sbjct: 667 NIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISA 726

Query: 578 KQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
                    Y  + ENL   G LEE G +   +    +  ++   + LV  +L++G
Sbjct: 727 YGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRG 782



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 155/611 (25%), Positives = 261/611 (42%), Gaps = 106/611 (17%)

Query: 178 AFSYLMVAYSRAGKLRNAM---YVLSMMQKAA------VAPNLLICNTAIHVLVVGNKLA 228
           AF++L+ A SRA    + +     +S+  +        VAP+    +  I       +L 
Sbjct: 153 AFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLE 212

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK-LIDEMPLKGCSPDKVSYYTV 287
                   +   G   N + +N L+KG CD  R+ +A   L+  MP  GC+P+ VSY T+
Sbjct: 213 HGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTL 272

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNL---------------FHDQGRIEEAKELVNQMSQ 332
           +   C E R +E  +L+  M +D  L               F  +G++++A  L  QM  
Sbjct: 273 VKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMID 332

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG--------- 383
            G  PDVVTY  V++G C+   +D+AK + QQM   G KP+  +Y   ++G         
Sbjct: 333 RGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKE 392

Query: 384 --------------------------LCHNGKSLEAREMINTS----------------- 400
                                     LC NG+  EAR + ++                  
Sbjct: 393 VVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCI 452

Query: 401 ----EEEWWTPNAITYSVVMHGLRREGKLSEAC-----------------------DVVR 433
                ++  +PN + Y  ++  L + G++ +A                        ++V 
Sbjct: 453 FDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVF 512

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM+ +G     V  N L+  LCREG++  A++ ++  L  G   +V+++ +L+ G C  G
Sbjct: 513 EMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTG 572

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
             +EA  LLD M      P+  TY T++    K  R+++A  L+ +ML  G  P VVTY 
Sbjct: 573 RTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYN 632

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           T++H   Q GR  +  +L   M++   Q     YN ++  LC    ++EA K+   +   
Sbjct: 633 TILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSK 692

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
             +    T ++++ + L  G    A  +   +    L+PD++    ++E LI EG  EE 
Sbjct: 693 GLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEEL 752

Query: 672 DTLMLRFVERG 682
             L     E G
Sbjct: 753 GVLFSAMEENG 763



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 208/484 (42%), Gaps = 67/484 (13%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K ++   AK V + M  +G++     ++ L+  Y   GK +  + +L
Sbjct: 338 DVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLL 397

Query: 200 SMMQKAAVAPNLLI-------------CNTAIH----VLVVGNK----LAKALRFLERMQ 238
             M    + P+  I             C  A +    V+  G K    + +A+   ++M+
Sbjct: 398 EEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMR 457

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAI-----------------------KLIDEMPLK 275
             G++PNV+ Y  LI   C L R+ DAI                       +L+ EM  +
Sbjct: 458 QQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQ 517

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
           G   D V + T+M  LC+E                       GR+ EA+ L+  M ++G 
Sbjct: 518 GIRLDVVVFNTLMCDLCRE-----------------------GRVMEAQRLIELMLRVGV 554

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PDV++Y  +V+G C  G  D+A K+L  M   G KPN  +Y   L+G C   +  +A  
Sbjct: 555 RPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYS 614

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           ++        TP+ +TY+ ++HGL + G+ SEA ++   M+           N+++  LC
Sbjct: 615 LLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLC 674

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           +   +D A K  Q   +KG  ++++ F  +I    + G  E+A+ L   +      PD  
Sbjct: 675 KNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVE 734

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY  I + L K G +EE   L   M   G  P       ++ R+   G +      L K+
Sbjct: 735 TYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKL 794

Query: 576 LSKQ 579
             K 
Sbjct: 795 DEKN 798



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 152/340 (44%), Gaps = 24/340 (7%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  +GI      F+ LM    R G++  A  ++ +M +  V P+++  NT +    +  +
Sbjct: 514 MLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGR 573

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
             +A + L+ M   G+ PN  TYN L+ GYC   RI DA  L+ EM + G +PD V+Y T
Sbjct: 574 TDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNT 633

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  L +  R  E ++L   M+N    +                       D+ TY  ++
Sbjct: 634 ILHGLFQTGRFSEAKELYLNMINSRTQW-----------------------DMYTYNIIL 670

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           NG C+   +D+A KM Q +   G + + +++   +  L   GK  +A ++  T       
Sbjct: 671 NGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLV 730

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+  TY ++   L +EG L E   +   M + G  P    +N L++     G +  A  +
Sbjct: 731 PDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAY 790

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           + +   K  ++     + LI  +  +G+ ++    L + Y
Sbjct: 791 LSKLDEKNFSLEASTASMLISLY-SRGEYQQLAKSLPEKY 829


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 211/415 (50%), Gaps = 17/415 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS L+    +AG+L  A+   + M +    PNL   N  +  L     + +A+     +Q
Sbjct: 6   FSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGIQ 65

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRI 297
               +P+V+T N LI G+C+L  +  A++L  EM       P+  +Y  ++   CK  R+
Sbjct: 66  ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRL 122

Query: 298 KEVRDLMEK----------MVNDSNLFHDQGRIEEAKELVNQM-SQMGCIPDVVTYTAVV 346
            + R L+E+          + + +  F    R++EA +L+  M  +    PD+V +  ++
Sbjct: 123 DQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVII 182

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN--TSEEEW 404
           +GFC+ G + +A +ML+ +   GC PN V+YT  ++G C +G   EA ++    +S +  
Sbjct: 183 HGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHH 242

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             PN +T++ ++ GL +  +L  A ++V++M  +           L+  LC++G+     
Sbjct: 243 AEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVS 302

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           +  +E L +GC  +VV +T+L+   C+ G L++A  ++  M      PD  TYT +++ L
Sbjct: 303 RVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGL 362

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
            +NG+V  ATE   K+L +   P  V Y  ++   C+   V++ +K   +ML ++
Sbjct: 363 FENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR 417



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 215/441 (48%), Gaps = 17/441 (3%)

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           PN  T++ LI G C   R+ +A++  ++M  + C P+      ++  LC+   + +   +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 304 MEKMVNDS---------NLFHDQGRIEEAKELVNQMSQ-MGCIPDVVTYTAVVNGFCRVG 353
              +             N F +   +++A EL ++M +    +P+  TYTA++  +C++ 
Sbjct: 61  FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI-NTSEEEWWTPNAITY 412
            LDQA+++L++     C  + ++ T+   G C   +  EA +++ +  E++   P+ + +
Sbjct: 121 RLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ--EC 470
           +V++HG  + G++ EA +++  +V  G  P  V    LI   C+ G +  A +  +    
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
            +     NVV F +LI G C+   LE A  L+  M       DT TYTT++D L K GR 
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRT 298

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQV 588
            E + +  +ML +G  P+VVTY T++H +C+ G ++D  +++  M++K      T Y  +
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           +E L   G +  A +   K+LR      A     LV       +   A K    M +R L
Sbjct: 359 LEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRL 418

Query: 649 IPDLKLCKKVSERLILEGKSE 669
            PD   CK + E L   G+++
Sbjct: 419 APDPATCKLLVEMLCKRGRTD 439



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 197/402 (49%), Gaps = 23/402 (5%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA- 240
           L+ +  +AG +  AM +   +Q    +P+++  N  I+       L KAL     M+   
Sbjct: 44  LLASLCQAGTMDQAMAIFRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNF 100

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
            + P   TY  +IK YC + R+  A +L++E     CS D ++  +V    CK +R+ E 
Sbjct: 101 ALVPEATTYTAIIKCYCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEA 158

Query: 301 RDLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
             L+  MV   +              F   GR+ EA E++  +  MGC+P+ VTYT +++
Sbjct: 159 YQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218

Query: 348 GFCRVGELDQAK---KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           GFC+ G L +A    K+L    HH  +PN V++ A ++GLC   +   A E++   +   
Sbjct: 219 GFCKSGNLSEALQLFKVLSSRDHHA-EPNVVTFNALISGLCKADRLEHAFELVKQMKARD 277

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
              +  TY+ +M GL ++G+ SE   V  EM+++G  P+ V    L+ + C+ G +  A+
Sbjct: 278 LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQ 337

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           + ++  + KG   +V  +T L+ G  + G +  A    + +   +  P  V Y+ ++   
Sbjct: 338 QVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGC 397

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
            K   V+EA +  ++ML + L P   T + ++   C+ GR +
Sbjct: 398 CKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 117/278 (42%), Gaps = 38/278 (13%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN  T+SV++ GL + G+L EA +   +M+++   P   +INLL+ SLC+ G MD A   
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +      C+ +V+    LI GFC+   L++AL L  +                   + K
Sbjct: 61  FR---GIQCSPSVITLNILINGFCELQLLDKALELFHE-------------------MEK 98

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN 586
           N                 LVP   TY  +I  YC++ R++   +LLE+         A  
Sbjct: 99  NF---------------ALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAIT 143

Query: 587 QVIENLCSFGYLEEAGKIL-GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
            V    C    ++EA ++L   V + ++K D    +V++  +   G    AY++   + +
Sbjct: 144 SVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVS 203

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
              +P+      + +     G   EA  L      R H
Sbjct: 204 MGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDH 241



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 4/161 (2%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           R D   Y  +++ L K        RV   M R G  C P   +Y  L+ A+ +AG L++A
Sbjct: 279 RADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREG--CNPSVVTYTTLVHAHCKAGSLQDA 336

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             V+  M    + P++      +  L    K+  A  F E++      P  + Y+ L++G
Sbjct: 337 QQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRG 396

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
            C    + +A+K   EM  +  +PD  +   ++  LCK  R
Sbjct: 397 CCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 5/179 (2%)

Query: 124 ALQFF-YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY- 181
           ALQ F   + R      + + +  ++  L K    + A  +++ M  R +  R + F+Y 
Sbjct: 229 ALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDL--RADTFTYT 286

Query: 182 -LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
            LM    + G+      V   M +    P+++   T +H       L  A + +  M   
Sbjct: 287 TLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAK 346

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
           GI P+V TY  L++G  +  +++ A +  +++  + C P  V Y  ++   CK   + E
Sbjct: 347 GIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDE 405


>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/563 (23%), Positives = 251/563 (44%), Gaps = 32/563 (5%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWR 136
           +V+ V  +   R  W   L  +  +    L P  +   +  Q +  ++L+FF+W   Q  
Sbjct: 97  IVKRVSDITRTRPRWEQTLLSDFPSF-NFLDPTFLSHFVEHQKNALISLRFFHWLSSQSG 155

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  D     ++ + L +   C  AK  L          +P +    +    + G +  A+
Sbjct: 156 FSPDSSSCNVLFDALVEAGACNAAKSFLD---STNFNPKPASLEAYIRCLCKGGLVEEAI 212

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            V   ++   V  ++   N+ +   V   ++         M  + +  +V T   L++ +
Sbjct: 213 SVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQAF 272

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           CD +RI D   L+  +   G  P   ++  ++   CK+K    V DL+  M+  +     
Sbjct: 273 CDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNR---- 328

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
                               PD+ TY  VVNG C+ G+  +  ++ + +   G  P+ V 
Sbjct: 329 -------------------APDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVM 369

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YT  ++GLC      +AR++     ++ + PN  TY+ ++HG  + G L EA  + REM 
Sbjct: 370 YTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMC 429

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            KG+    V  N++I+ LC  GK+  A    +E  +KG   N + + +L+RGFC++G + 
Sbjct: 430 DKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIV 489

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           E  +LL ++      P   +Y  +ID L + G ++ A  L   M ++G+ P V T+  +I
Sbjct: 490 EGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMI 549

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
             +C+ G   + ++ L  ML + K R    ++  +I+ L     L++A  +L  +L+   
Sbjct: 550 TGFCKQGCAMEGMEWLTTML-RSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGF 608

Query: 614 KADASTCHVLVESYLNK-GIPLL 635
           +   S C+ LV     K  +P+L
Sbjct: 609 RLSISICNSLVTKLCEKNSLPIL 631



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/357 (21%), Positives = 154/357 (43%), Gaps = 3/357 (0%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P   +  A +   C+ G +++A  +  Q+   G   +  ++ + L G    G+     E+
Sbjct: 190 PKPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWEL 249

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
                E     +  T   ++     E ++S+  +++R +++ G  P     N LI   C+
Sbjct: 250 YGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCK 309

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           +         +   + +  A ++  +  ++ G C+ G   E   +  D+      PD V 
Sbjct: 310 DKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVM 369

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           YTT+I  L +   + +A +L  +M+ KG +P   TY  +IH Y ++G +E+  K+  +M 
Sbjct: 370 YTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMC 429

Query: 577 SKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
            K   +   +YN +I+ LCS G ++EA  +  ++       +  T + LV  +  +G  +
Sbjct: 430 DKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIV 489

Query: 635 LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
               +   + ++ + P       + ++L  EG  + A  L      RG ++P    H
Sbjct: 490 EGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRG-MEPAVCTH 545



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 97/250 (38%), Gaps = 42/250 (16%)

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC-LNKGCAVNVVNFTSLIRGFCQKGDL 495
           + GF P     N+L  +L   G  + AK F+     N   A    +  + IR  C+ G +
Sbjct: 153 QSGFSPDSSSCNVLFDALVEAGACNAAKSFLDSTNFNPKPA----SLEAYIRCLCKGGLV 208

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           EEA+S+   +          T+ +++    + GR++   EL  +M+   +V  V T   +
Sbjct: 209 EEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYL 268

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +  +C   R+ D   LL ++L         A+N++I   C         K  G+V     
Sbjct: 269 VQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCK-------DKAYGRV----- 316

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
            +D      L+ S                M  RN  PD+   ++V   L   GK  E   
Sbjct: 317 -SD------LLHS----------------MIARNRAPDIFTYQEVVNGLCKGGKGPEGFR 353

Query: 674 LMLRFVERGH 683
           +     +RG+
Sbjct: 354 VFKDLKDRGY 363


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 252/540 (46%), Gaps = 36/540 (6%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADR-QW 135
           LV+++  ++   + W   L+         L       VL    D  + L+FF W  R Q+
Sbjct: 30  LVKDILEVLHTHNQWEENLQTRFSES-EVLASDVAHLVLDRIRDVELGLKFFDWVSRGQY 88

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
               +   Y  +L++L+++++    + VL  M    +    EA S ++ AYS +G +  A
Sbjct: 89  SGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKA 148

Query: 196 MYVLSMMQKA-AVAPNLLICNTAIHVLV-VG-------------------NKLAKALRFL 234
           + +   + K     P+++ CN+ +++LV +G                    KL +  + +
Sbjct: 149 LELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLI 208

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
           E     G  PN++ YN LI GYC    ++ A  L  E+ LKG  P   +Y  ++   CK+
Sbjct: 209 EDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKK 268

Query: 295 KRIKEVRDLMEKM--------VNDSNLFHD----QGRIEEAKELVNQMSQMGCIPDVVTY 342
              K +  L+ +M        V   N   D     G I +A E +  M + GC PD+VTY
Sbjct: 269 GDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTY 328

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             +++G CR G++ +A ++L+Q    G  PN  SYT  ++  C  G    A   +    E
Sbjct: 329 NTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTE 388

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               P+ +TY  ++HGL   G++  A  +  +M+++G FP     N+L+  LC++ K+  
Sbjct: 389 RGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPA 448

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           AK  + E L++    +   + +L+ GF + G+L+EA  L +       +P  V Y  +I 
Sbjct: 449 AKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIK 508

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
              K G +++A   + +M  + L P   TY TVI  Y +   ++   K+  +M+ K KC+
Sbjct: 509 GYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMV-KMKCK 567



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 197/422 (46%), Gaps = 8/422 (1%)

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS--PDKVSYYTVMGYL 291
           LE M++  ++P     + +I+ Y D   ++ A++L     LK  +  PD ++  +++  L
Sbjct: 117 LENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY-YFVLKTYTYFPDVIACNSLLNML 175

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
            K  RI+  R     MV        +G++EE ++L+      GCIP+++ Y  +++G+C+
Sbjct: 176 VKLGRIEIARKFTCIMVKG---LCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCK 232

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            G+++ A  +  ++   G  P   +Y A +NG C  G       ++        T N   
Sbjct: 233 KGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQV 292

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+ ++    + G + +A + +  M++ G  P  V  N LI   CR+GK+  A + +++ L
Sbjct: 293 YNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQAL 352

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            KG   N  ++T LI  +C++G  + A + L +M      PD VTY  ++  L   G V+
Sbjct: 353 GKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVD 412

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVI 589
            A  +  KML +G+ P    Y  ++   C+  ++     LL +ML +     A  Y  ++
Sbjct: 413 VALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLV 472

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           +     G L+EA K+    +           + +++ Y   G+   A     RM  R+L 
Sbjct: 473 DGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLA 532

Query: 650 PD 651
           PD
Sbjct: 533 PD 534



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 187/402 (46%), Gaps = 20/402 (4%)

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVN-QMSQMGCIPDVVTYT 343
           ++ M  + +  R++E+    E M      + D G +E+A EL    +      PDV+   
Sbjct: 110 FSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACN 169

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
           +++N   ++G ++ A+K    M               + GLC  GK  E R++I     +
Sbjct: 170 SLLNMLVKLGRIEIARKFTCIM---------------VKGLCKEGKLEEGRKLIEDRWGQ 214

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              PN I Y+ ++ G  ++G +  A  +  E+  KGF PT      +I   C++G     
Sbjct: 215 GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAI 274

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            + + E  ++G  VNV  + ++I    + G + +A+  ++ M  C   PD VTY T+I  
Sbjct: 275 DRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISG 334

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKC 581
             ++G+V EA +L+ + L KGL+P   +Y  +IH YC+ G  +     L +M  +  +  
Sbjct: 335 SCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPD 394

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA- 640
              Y  ++  L   G ++ A  I  K+L      DA   ++L+ S L K   L A K+  
Sbjct: 395 LVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILM-SGLCKKFKLPAAKLLL 453

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             M +++++PD  +   + +  I  G  +EA  L    +E+G
Sbjct: 454 AEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 495



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 171/425 (40%), Gaps = 67/425 (15%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA--------------- 168
           AL+ +Y+  + + Y  D I    +L +L K    + A++   +M                
Sbjct: 148 ALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKL 207

Query: 169 ---RRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
              R G  C P    Y  L+  Y + G +  A  +   ++     P +      I+    
Sbjct: 208 IEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCK 267

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
                   R L  M   G+T NV  YN +I        I  A++ I+ M   GC PD V+
Sbjct: 268 KGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVT 327

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFH---DQGRIEEAKELVNQMS 331
           Y T++   C++ ++ E   L+E+ +           + L H    QG  + A   + +M+
Sbjct: 328 YNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMT 387

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
           + G  PD+VTY A+V+G    GE+D A  + ++M   G  P+   Y   ++GLC   K  
Sbjct: 388 ERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLP 447

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
            A+ ++    ++   P+A  Y+ ++ G  R G L EA  +    ++KG  P  V  N +I
Sbjct: 448 AAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMI 507

Query: 452 QSLCREGKM-----------------------------------DGAKKFMQECLNKGCA 476
           +  C+ G M                                   DGA+K  +E +   C 
Sbjct: 508 KGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCK 567

Query: 477 VNVVN 481
            NV++
Sbjct: 568 PNVMD 572


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 238/493 (48%), Gaps = 23/493 (4%)

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           P ++  NT I  L   +K+ +A +F   M   G  P+V+ +  LI G+C   + +   KL
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE--VRDLMEKMVNDSNLF-------HDQGR 319
           +++  LK   PD   Y +V+   CK   +     R +  K   D   +        D  R
Sbjct: 65  LNQA-LKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKR 123

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           I+EA EL  ++   GC P+VV YTAV++G  + G ++   K  ++M    C P   +YT 
Sbjct: 124 IDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTV 183

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++GLC      +A ++     ++   P+ ITY+ ++ G  +  K+ EA  ++  M+ KG
Sbjct: 184 VIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 243

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             PT V    ++   C+   ++ AK+ + +   +GC   +  FTSL+  +  KG  EEA 
Sbjct: 244 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 303

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +L +M      PD + YT++ID L   GRV EA  +   M+ KG  P  +TY T+I  +
Sbjct: 304 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 363

Query: 560 CQVGRVE---DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            ++G VE   ++L+L+ K      C  AYN +++       +++A  +  +++ +  K +
Sbjct: 364 SKIGNVEAAGEILELMAKSGVGPDC-FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 422

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE--GKSEEADTL 674
           A T +VL+      G    A+ +   M  +  +P       VS  ++++  GK+      
Sbjct: 423 AVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPP----TLVSYTILIDGLGKAGRVSEA 478

Query: 675 MLRF---VERGHI 684
            L+F   ++RG I
Sbjct: 479 FLQFQEMIDRGII 491



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 227/497 (45%), Gaps = 30/497 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D I Y  +++ L+ +K    A  +   +   G  C P   +Y  V     +AG++ + + 
Sbjct: 107 DVISYTTVIKGLADSKRIDEACELFEELKTAG--CSPNVVAYTAVIDGLLKAGRIEDGLK 164

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
               M  ++  P        I  L     L  A +  E+M   G  P+ +TY  LI G+ 
Sbjct: 165 NFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFS 224

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              ++ +A KL+D M  KG  P  V+Y +++   CK             M+N        
Sbjct: 225 KASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCK-----------LDMIN-------- 265

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
               EAKE++ QM + GC P +  +T++++ +   G  ++A ++L +M   GC P+ + Y
Sbjct: 266 ----EAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILY 321

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T+ ++ L   G+  EAR + ++  E+   P+A+TY  ++    + G +  A +++  M K
Sbjct: 322 TSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 381

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G  P     N L+    +  ++D A       +  G   N V F  L+ G  + G  + 
Sbjct: 382 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 441

Query: 498 ALSLLDDMYLCKKDPDT-VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           A SL  +M   ++ P T V+YT +ID L K GRV EA     +M+ +G++P   TY ++I
Sbjct: 442 AFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLI 501

Query: 557 HRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           +   + GR+ +  KL+E M  L       AY+ +I  L     ++ A  +  ++++    
Sbjct: 502 YSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 561

Query: 615 ADASTCHVLVESYLNKG 631
            +  T  VL   +   G
Sbjct: 562 PNEVTYKVLRRGFRAAG 578



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 212/456 (46%), Gaps = 10/456 (2%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G  P +++YN +I G   + ++ +A K  + M   GC PD +++ T++   CK  + +  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 301 RDLMEKMVND--------SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
             L+ + +          +++ H   +  +      +        DV++YT V+ G    
Sbjct: 62  HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADS 121

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
             +D+A ++ +++   GC PN V+YTA ++GL   G+  +  +           P   TY
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           +VV+ GL +   L +AC V  +MV+KG  P  +    LI    +  KMD A+K +   L 
Sbjct: 182 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 241

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           KG     V + S++ GFC+   + EA  ++  M     +P    +T+++      GR EE
Sbjct: 242 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 301

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIE 590
           A +++ +M ++G  P V+ Y ++I      GRV +   + + M+ K     A  Y  +I+
Sbjct: 302 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQ 361

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
           N    G +E AG+IL  + ++    D    + L++ Y+       A+ V  RM    + P
Sbjct: 362 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 421

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           +      +   L  +GK++ A +L    +E+  + P
Sbjct: 422 NAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPP 457



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 200/413 (48%), Gaps = 15/413 (3%)

Query: 171 GIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
           G  C P   +Y +V     +A  L +A  V   M +    P+ +   T I      +K+ 
Sbjct: 171 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 230

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           +A + L+ M   G  P  +TY  ++ G+C L  I +A ++I +M  +GC P    + +++
Sbjct: 231 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 290

Query: 289 GYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCI 336
            Y   + R +E   ++ +M                +L    GR+ EA+ + + M + GC 
Sbjct: 291 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 350

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PD +TY  ++  F ++G ++ A ++L+ M   G  P+  +Y + ++G     +  +A  +
Sbjct: 351 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 410

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG-FFPTPVEINLLIQSLC 455
            +        PNA+T++V+MHGL ++GK   A  + +EM++K    PT V   +LI  L 
Sbjct: 411 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLG 470

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + G++  A    QE +++G       +TSLI    + G + EA  L++DM     +PD  
Sbjct: 471 KAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQ 530

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
            Y+ +I  L  +  V+ A ++  +M+ +G  P  VTY+ +   +   GR  DL
Sbjct: 531 AYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDL 583



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 175/352 (49%), Gaps = 6/352 (1%)

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           MGC P +V+Y  V++G   + ++D+A K    M  +GC+P+ +++T  ++G C  G+   
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
             +++N + + +  P+   Y+ V+HG  + G L       R +  K      +    +I+
Sbjct: 61  GHKLLNQALKRFR-PDVFLYTSVIHGYCKAGDLDTG--YFRAVTPKASLDV-ISYTTVIK 116

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            L    ++D A +  +E    GC+ NVV +T++I G  + G +E+ L   ++M      P
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
              TYT +ID L K   + +A ++  +M+ KG VP  +TY T+I  + +  ++++  KLL
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236

Query: 573 EKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           + ML+K    TA  Y  ++   C    + EA +++ ++     +        L+  YL+K
Sbjct: 237 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 296

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           G    AY+V   M  R   PD+ L   + + L   G+  EA  +    +E+G
Sbjct: 297 GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG 348


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 178/699 (25%), Positives = 318/699 (45%), Gaps = 85/699 (12%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLR---SQADERVALQFFYWADR 133
           +V E+ R++  R  W+       + L  S+    +  + R   S  D   AL FF W  R
Sbjct: 22  IVAELGRVLSTRR-WNKG--SAYKRLSPSVTAAHVADLFRAPVSPLDPATALAFFEWVAR 78

Query: 134 QWRYRHDPIVYYMMLEILSKTKL-------------CQG----------AKRVLRLMARR 170
           +  +RH    +  +L++L++ +              C G          A + +R +  +
Sbjct: 79  RPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGK 138

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
            +   P+ ++  + +  R         + S + +  + P+ +  NT I        LA A
Sbjct: 139 RLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIA 198

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
            R+   ++ +G+  +  T N L+ GYC    ++ A  L+  MPL GC  ++ SY  ++  
Sbjct: 199 HRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQG 258

Query: 291 LCKEKRIKEVRDLMEKMVNDS---NLFH---------DQGRIEEAKELVNQMSQMGCIPD 338
           L + + ++E   L+  MV D    NL            +GRI +A+ L+++M   G +P 
Sbjct: 259 LYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPS 318

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V TY A+++G+C+ G +  A  +   M  +GC P+  +Y + + GLC  GK  EA E++N
Sbjct: 319 VWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLN 377

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
            +    +TP  IT++ +++G  +  ++ +A  V   M+            +LI  L ++ 
Sbjct: 378 GAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKC 437

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           ++  AK+ + E    G A NVV +TS+I G+C+ G +  AL +   M      P+  TY 
Sbjct: 438 RLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYG 497

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           ++I  L ++ ++ +A  L+ KM   G+ P V+ Y T+I   C+    ++  +L E M+ K
Sbjct: 498 SLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFE-MMEK 556

Query: 579 QKC---RTAYNQVIENLCSFGYLEEA-------GKILGKVLRTA-----SKA-DASTCHV 622
                   AYN + + LC  G  EEA       G +L KV  T+     SKA +     V
Sbjct: 557 NGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAV 616

Query: 623 LVESYLNKG--IPLLAYKV-------------ACRMFNRNLIPDLKLCKKVSERLIL--- 664
           L+E  +N+G    L  Y V             A  + ++  +  +K C  V+  +I+   
Sbjct: 617 LIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVK-CNIVAYTIIISEM 675

Query: 665 --EGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVFLNS 701
             EGK + A +L    +  GH +P +  +     VF++S
Sbjct: 676 IKEGKHDHAKSLFNEMISSGH-KPSATTY----TVFISS 709



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 246/542 (45%), Gaps = 55/542 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  M+    K      A R   L+   G++      + L++ Y R   LR A ++L
Sbjct: 178 DTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLL 237

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            MM       N       I  L     + +AL  +  M   G + N+  Y  LIKG C  
Sbjct: 238 MMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKE 297

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEKM-VNDSNLFH 315
            RI DA  L+DEMPL+G  P   +Y  ++   CK  R+K+   ++ LME+   N  +  +
Sbjct: 298 GRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTY 357

Query: 316 DQ-------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD------------ 356
           +        G+++EA+EL+N     G  P V+T+T ++NG+C+   +D            
Sbjct: 358 NSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISS 417

Query: 357 -----------------------QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
                                  +AK+ L +M+ +G  PN V YT+ ++G C  G    A
Sbjct: 418 NCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAA 477

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            E+    E E   PNA TY  +++GL ++ KL +A  ++ +M + G  P  +    LIQ 
Sbjct: 478 LEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQG 537

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL--DDMYLCKKD 511
            C++ + D A +  +     G   +   +  L    C+ G  EEA S L    + L K  
Sbjct: 538 QCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTK-- 595

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
              VTYT+++D  SK G  + A  L+ KM+++G    + TY  ++   C+  ++ + L +
Sbjct: 596 ---VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSI 652

Query: 572 LEKM-LSKQKCR-TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
           L++M +S  KC   AY  +I  +   G  + A  +  +++ +  K  A+T  V + SY  
Sbjct: 653 LDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCK 712

Query: 630 KG 631
            G
Sbjct: 713 IG 714



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 208/455 (45%), Gaps = 42/455 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++ +L K    + AK  L  M   G+      ++ ++  Y + G +  A+ V 
Sbjct: 422 DLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVF 481

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M+     PN     + I+ L+   KL KA+  + +MQ  GITP V+ Y  LI+G C  
Sbjct: 482 KLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKK 541

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           H   +A +L + M   G +PD+ +Y  +   LCK                        GR
Sbjct: 542 HEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCK-----------------------SGR 578

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            EEA      + + G +   VTYT++V+GF + G  D A  ++++M + GCK +  +Y+ 
Sbjct: 579 AEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSV 635

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L  LC   K  EA  +++         N + Y++++  + +EGK   A  +  EM+  G
Sbjct: 636 LLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSG 695

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P+     + I S C+ G+++ A+  + E    G   +VV +   I G    G ++ A 
Sbjct: 696 HKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAF 755

Query: 500 SLLDDMYLCKKDPDTVTYTTI--------------IDALSKNGRVEEAT--ELMMKMLSK 543
           S L  M     +P+  TY  +              ID       +E  T  +L+ +M+  
Sbjct: 756 STLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKH 815

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           GL PTVVTY ++I  +C+  R+E+   LL+ ML K
Sbjct: 816 GLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGK 850



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/402 (22%), Positives = 166/402 (41%), Gaps = 45/402 (11%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++  SK      A  ++  M   G +     +S L+ A  +  KL  A+ +L  
Sbjct: 596 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQ 655

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M  + V  N++     I  ++   K   A      M  +G  P+  TY   I  YC + +
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQ 715

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           I++A  LI EM   G +PD V+Y+  +                       N     G ++
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYHIFI-----------------------NGCGHMGYMD 752

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG----------------ELDQAKKMLQQM 365
            A   + +M    C P+  TY  ++  F ++                 EL+   ++L++M
Sbjct: 753 RAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERM 812

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
             HG  P  V+Y++ + G C   +  EA  +++    +  +PN   Y++++         
Sbjct: 813 MKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLF 872

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +    V +M++ GF P     + LI  LC EG  D AK    + L      N V +  L
Sbjct: 873 GKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKIL 932

Query: 486 IRGFCQKGDLE---EALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             G  + G ++   + L+ +D+ + C+ D +  +Y+ + D++
Sbjct: 933 NDGLLKAGHVDFCSQLLAAMDNRH-CRIDSE--SYSMLTDSI 971



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/348 (20%), Positives = 147/348 (42%), Gaps = 7/348 (2%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D   Y ++L+ L K K    A  +L  M   G++C   A++ ++    + GK  +A  
Sbjct: 627 KADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKS 686

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           + + M  +   P+       I       ++ +A   +  M+  G+TP+V+TY+  I G  
Sbjct: 687 LFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCG 746

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
            +  +  A   +  M    C P+  +Y+ ++ +  K         L+     D++   + 
Sbjct: 747 HMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLK-------MSLINAHYIDTSGMWNW 799

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
             +    +L+ +M + G  P VVTY++++ GFC+   L++A  +L  M      PN   Y
Sbjct: 800 IELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIY 859

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T  +   C      +    +    E  + P   +Y  ++ GL  EG    A  +  +++ 
Sbjct: 860 TMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLG 919

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             +    V   +L   L + G +D   + +    N+ C ++  +++ L
Sbjct: 920 MDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/311 (18%), Positives = 127/311 (40%), Gaps = 36/311 (11%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y +++  + K      AK +   M   G +     ++  + +Y + G++  A +++  
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGE 725

Query: 202 MQKAAVAPNLLICNTAIHVLVVG----NKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           M++  V P+++      H+ + G      + +A   L+RM  A   PN  TY  L+K + 
Sbjct: 726 MERDGVTPDVV----TYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFL 781

Query: 258 DLHRIK----------------DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
            +  I                    +L++ M   G +P  V+Y +++   CK  R++E  
Sbjct: 782 KMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEAC 841

Query: 302 DLMEKMVNDSNLFHDQGRIEEAK------------ELVNQMSQMGCIPDVVTYTAVVNGF 349
            L++ M+  +   +++      K              V  M + G  P + +Y  ++ G 
Sbjct: 842 VLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGL 901

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C  G+ D+AK +   +       N V++    +GL   G      +++   +      ++
Sbjct: 902 CDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDS 961

Query: 410 ITYSVVMHGLR 420
            +YS++   +R
Sbjct: 962 ESYSMLTDSIR 972


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 236/507 (46%), Gaps = 44/507 (8%)

Query: 161 KRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
           KR+L +M   G       F+ L+ AY ++     A  +L  M+K    P  ++ N  I  
Sbjct: 363 KRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGS 422

Query: 221 LVVGNKLAKALRF------LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           +  G +L   + F         M  AG   N +      +  C   + + A K+I EM  
Sbjct: 423 ICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMG 482

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEE 322
            G  PD  +Y  V+G+LC   R++    L ++M                + F   G I++
Sbjct: 483 NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQ 542

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A   +++M + GC P VVTYT +++ + +  ++  A ++ + M   GC PN ++YTA ++
Sbjct: 543 AHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALID 602

Query: 383 GLCHNGKSLEAREMI--------------------NTSEEEWWTPNAITYSVVMHGLRRE 422
           G C +G   +A ++                     N +E+    PN +TY  ++ GL + 
Sbjct: 603 GYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK----PNVVTYGALVDGLCKA 658

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            K+ +A D++  M   G  P  +  + LI   C+  K+D A++   + + +G   NV  +
Sbjct: 659 HKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTY 718

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           +SLI    +   L+  L +L  M      P+ V YT +ID LSK  + +EA +LM+ M  
Sbjct: 719 SSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEE 778

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
           KG  P VVTY  +I  + + G+V+  L+L  +M SK        Y  +I + C+ G+L+E
Sbjct: 779 KGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDE 838

Query: 601 AGKILGKVLRTASKADASTCHVLVESY 627
           A  +L ++ +T      S+   ++E Y
Sbjct: 839 AYALLEEMKQTYWPKHVSSYCKVIEGY 865



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 239/505 (47%), Gaps = 45/505 (8%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           + A +V+  M   G       +S ++     A ++ NA ++   M+   V P++      
Sbjct: 471 EKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTIL 530

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I        + +A  +L+ M   G  P V+TY  LI  Y    ++  A +L + M  KGC
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
            P+ ++Y  ++   CK   I++   +  +M  D+    D   ++   ++ N +++    P
Sbjct: 591 FPNVITYTALIDGYCKSGNIEKACQIYARMRGDA----DIPDVDMYFKIKNNVAEK---P 643

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           +VVTY A+V+G C+  ++  A+ +L+ M+  GC+PNT+ Y A ++G C   K  EA+E+ 
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +   E  + PN  TYS ++  L ++ +L     V+ +M++    P  V    +I  L + 
Sbjct: 704 HKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKV 763

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
            K D A K M     KGC  NVV +T++I GF + G +++ L L  +M      P+ VTY
Sbjct: 764 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 823

Query: 518 TTIIDALSKNGRVEEATELMMKM------------------------LSKGLV------- 546
           T +I+     G ++EA  L+ +M                        LS GL+       
Sbjct: 824 TVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNG 883

Query: 547 --PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLC-SFGY---LEE 600
             PT++ Y+ +I  + + GR+E  L+L ++++S     TA   +  +L  SF Y   ++ 
Sbjct: 884 SAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDH 943

Query: 601 AGKILGKVLRTASKADAST-CHVLV 624
           A ++   ++R     D  T  H+L+
Sbjct: 944 AFELFYDMIRDGVIPDLGTFVHLLM 968



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/601 (22%), Positives = 254/601 (42%), Gaps = 39/601 (6%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           LR   + L P  +  +L       + ++FF WA RQ  Y H P VY  +L++  +    +
Sbjct: 129 LRQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDR 188

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
             +  LR +     E   +  + L+    R G    A+  L  ++     P  +  N  +
Sbjct: 189 VPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALV 248

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
            V +  +KL  A      M   G++ +  T     +  C + + ++A+ LI++   +   
Sbjct: 249 QVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFV 305

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG------------RIEEAKEL 326
           P+ + Y  ++  LC+    +E  D + +M + S + + Q             ++   K +
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRI 365

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           ++ M   GC P    + ++V+ +C+  +   A K+L++M    CKP  V Y   +  +C 
Sbjct: 366 LSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICS 425

Query: 387 NGK--SLEAREMINTSEEEWWTPNAITYSVVMHGLRR----EGKLSEACDVVREMVKKGF 440
            G+       E+   +  E  +   +   V +    R     GK  +A  V+ EM+  GF
Sbjct: 426 GGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGF 485

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P     + +I  LC   +++ A    +E    G   +V  +T LI  F + G +++A +
Sbjct: 486 VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHN 545

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
            LD+M     +P  VTYTT+I A  K  +V  A EL   M++KG  P V+TY  +I  YC
Sbjct: 546 WLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYC 605

Query: 561 QVGRVEDLLKLLEKM------------------LSKQKCRTAYNQVIENLCSFGYLEEAG 602
           + G +E   ++  +M                  ++++     Y  +++ LC    +++A 
Sbjct: 606 KSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
            +L  +     + +      L++ +        A +V  +M  R   P++     + +RL
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRL 725

Query: 663 I 663
            
Sbjct: 726 F 726



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 227/478 (47%), Gaps = 56/478 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++  SK  + + A   L  M R G E     ++ L+ AY +A K+  A  + 
Sbjct: 523 DVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELF 582

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL-AGIT--------------- 243
            +M      PN++     I        + KA +   RM+  A I                
Sbjct: 583 ELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK 642

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           PNV+TY  L+ G C  H++KDA  L++ M + GC P+ + Y  ++   CK  ++ E +++
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702

Query: 304 MEKMVNDS-------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
             KMV                 LF D+ R++   +++++M +  C P++V YT +++G  
Sbjct: 703 FHKMVERGYNPNVYTYSSLIDRLFKDK-RLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +V + D+A K++  M   GCKPN V+YTA ++G    GK  +  E+      +   PN +
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK----- 465
           TY+V+++     G L EA  ++ EM K+ ++P  V       S C+   ++G K+     
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEM-KQTYWPKHV------SSYCK--VIEGYKREFILS 872

Query: 466 --FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY------LCKKDPDTVTY 517
              ++E    G A  ++ +  LI  F + G LE AL L  ++         KK+     Y
Sbjct: 873 LGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKN----LY 928

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           T++I + S   +++ A EL   M+  G++P + T+  ++    +V R E+ L+L + +
Sbjct: 929 TSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/570 (22%), Positives = 245/570 (42%), Gaps = 42/570 (7%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           + + Y+   + Y  ++++  +      A+ V R M+  G+        +   A  + GK 
Sbjct: 233 KDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKW 292

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
           R A   LS+++K    PN ++ N  I  L   +   +A+ FL RM+     PNV TY  L
Sbjct: 293 REA---LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRIL 349

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----- 307
           + G  +  ++    +++  M  +GC P    + +++   CK         L++KM     
Sbjct: 350 LCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCEC 409

Query: 308 -------------VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
                        +            E A++  N+M   G + + V   +     C  G+
Sbjct: 410 KPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGK 469

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
            ++A K++ +M  +G  P+T +Y+  +  LC+  +   A  +    +     P+  TY++
Sbjct: 470 FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTI 529

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++    + G + +A + + EMV+ G  PT V    LI +  +  K+  A +  +  + KG
Sbjct: 530 LIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           C  NV+ +T+LI G+C+ G++E+A  +   M      PD   Y  I     KN   E+  
Sbjct: 590 CFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKI-----KNNVAEK-- 642

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
                       P VVTY  ++   C+  +V+D   LLE M     +     Y+ +I+  
Sbjct: 643 ------------PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGF 690

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C    L+EA ++  K++      +  T   L++         L  KV  +M   +  P++
Sbjct: 691 CKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNI 750

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +  ++ + L    K++EA  LML   E+G
Sbjct: 751 VIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 180/432 (41%), Gaps = 63/432 (14%)

Query: 107 KPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRL 166
           K  QI A +R  AD      +F   +     + + + Y  +++ L K    + A+ +L  
Sbjct: 612 KACQIYARMRGDADIPDVDMYFKIKNNVAE-KPNVVTYGALVDGLCKAHKVKDARDLLET 670

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   G E     +  L+  + +A KL  A  V   M +    PN+   ++ I  L    +
Sbjct: 671 MFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKR 730

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L   L+ L +M      PN++ Y  +I G   + +  +A KL+  M  KGC P+ V+Y  
Sbjct: 731 LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTA 790

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++                       + F   G++++  EL  +M   GC P+ VTYT ++
Sbjct: 791 MI-----------------------DGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 827

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           N  C  G LD+A  +L++M                                   ++ +W 
Sbjct: 828 NHCCATGHLDEAYALLEEM-----------------------------------KQTYWP 852

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            +  +Y  V+ G +RE  LS    ++ E+ K G  PT +   +LI +  + G+++ A + 
Sbjct: 853 KHVSSYCKVIEGYKREFILSLG--LLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALEL 910

Query: 467 MQECLNKGCAVNVVN--FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
            +E ++   ++      +TSLI  F     ++ A  L  DM      PD  T+  ++  L
Sbjct: 911 HKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGL 970

Query: 525 SKNGRVEEATEL 536
            +  R EEA +L
Sbjct: 971 IRVRRWEEALQL 982


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 236/480 (49%), Gaps = 33/480 (6%)

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
            +F++L+   ++        Y+ + M+ + ++P+    N  ++ L   N++ + L  +  
Sbjct: 97  SSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAG 156

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           +   G  P+++TY  LIKG C  HRI  A  L   M   GC+P+ ++Y T+M  LC+   
Sbjct: 157 ILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGN 216

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
           I     L ++M+NDS+L+    +                 P V++Y+ +++  C+    D
Sbjct: 217 ISIALKLHQEMLNDSSLYGINFK-----------------PVVISYSIIIDALCKDRRED 259

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A+ + ++M   G  P  +SYT+ +          EA+ + N    +   PN +T++V++
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLI 311

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
             L +EGK+ EA D++  M+++G  P  +  N LI+  C  G ++ A++      +KGC 
Sbjct: 312 DVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCE 371

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            +V+ +T LI G+C+   +EEA+ L + M    K PD  TY  ++  L + G+V +A +L
Sbjct: 372 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 431

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ-----KCRTAYNQVIEN 591
              M   G+   +  Y   ++  C+ G + + ++L  K+ S       +C   +N +I+ 
Sbjct: 432 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIEC---FNCLIDG 488

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC  G LE A ++  K+ +   + D  T ++++  +   G  + A  +  +M      PD
Sbjct: 489 LCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPD 548



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 222/463 (47%), Gaps = 13/463 (2%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYM-MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYL 182
           A QFF+     +     P+  +  +L  L+K K       +   M   GI       + L
Sbjct: 80  AFQFFHLM--MYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNIL 137

Query: 183 MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
           +       ++   + V++ + +    P+++   T I  L + ++++KA     RMQ  G 
Sbjct: 138 LNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGC 197

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEM----PLKGCS--PDKVSYYTVMGYLCKEKR 296
           TPN +TY  L+KG C    I  A+KL  EM     L G +  P  +SY  ++  LCK++R
Sbjct: 198 TPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRR 257

Query: 297 IKEVRDLMEKM----VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
             E RDL E+M    +  + + +     EEAK L N+M   G  P+VVT+  +++  C+ 
Sbjct: 258 EDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKE 317

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
           G++ +AK +L+ M   G  PN ++Y + + G C  G    ARE+  +   +   P+ I Y
Sbjct: 318 GKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICY 377

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           +V+++G  +  K+ EA  +   M++ G  P       L+  L + GK+  AKK       
Sbjct: 378 TVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKV 437

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            G   ++  +   + G C+ G L EA+ L + +       D   +  +ID L K G++E 
Sbjct: 438 YGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLET 497

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           A EL  K+  + L P VVTY  +IH +C+ G+V     L +KM
Sbjct: 498 AWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKM 540



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 219/486 (45%), Gaps = 29/486 (5%)

Query: 218 IHVLVVGNKLA-KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
           +H    GN  A +A +F   M  +  TP + ++  L+ G   +        L ++M L G
Sbjct: 67  LHNCKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSG 126

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSNLFHD---QGRIEEAK 324
            SPD  +   ++  LC   R+ E          R  +  +V  + L      + RI +A 
Sbjct: 127 ISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAA 186

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM------YHHGCKPNTVSYT 378
            L  +M ++GC P+ +TY  ++ G CR G +  A K+ Q+M      Y    KP  +SY+
Sbjct: 187 LLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYS 246

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++ LC + +  EAR++    + +  TP  I+Y+ +M          EA  +  EMV +
Sbjct: 247 IIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQ 298

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  V  N+LI  LC+EGK+  AK  ++  + +G   N++ + SLI GFC  GDL  A
Sbjct: 299 GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSA 358

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             L   M     +PD + YT +I+   K  +VEEA +L   ML  G  P V TY  ++  
Sbjct: 359 RELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTG 418

Query: 559 YCQVGRVEDLLKLLE--KMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
             Q G+V D  KL    K+         Y   +  LC  G L EA ++  K+     K D
Sbjct: 419 LFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLD 478

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
               + L++     G    A+++  ++    L PD+     +       G+  +A+ L  
Sbjct: 479 IECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQ 538

Query: 677 RFVERG 682
           +  + G
Sbjct: 539 KMEKNG 544



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 12/269 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + + +++++L K      AK +L +M +RGI      ++ L+  +   G L +A  +   
Sbjct: 305 VTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVS 364

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M      P+++     I+     +K+ +A++    M   G  P+V TY  L+ G     +
Sbjct: 365 MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 424

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFH- 315
           + DA KL   M + G   D   Y   +  LCK   + E  +L  K+ +     D   F+ 
Sbjct: 425 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 484

Query: 316 ------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                   G++E A EL  ++ Q    PDVVTY  +++ FCR G++ +A  + Q+M  +G
Sbjct: 485 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 544

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           C P+ ++Y   + G   + K  +  E+++
Sbjct: 545 CTPDKITYATLIRGFFESKKLEKVVELLH 573



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/226 (21%), Positives = 101/226 (44%), Gaps = 23/226 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y +++    KT   + A ++   M + G     + +  L+    + GK+ +A  + 
Sbjct: 373 DVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLF 432

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M+   +  +L I    ++ L     L +A+    +++   I  ++  +NCLI G C  
Sbjct: 433 GVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKA 492

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            +++ A +L +++P +   PD V+Y  ++   C+                        G+
Sbjct: 493 GKLETAWELFEKLPQEELQPDVVTYNIMIHEFCR-----------------------GGQ 529

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
           + +A  L  +M + GC PD +TY  ++ GF    +L++  ++L  M
Sbjct: 530 VVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 575



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 3/192 (1%)

Query: 117 SQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP 176
           S+ +E + L   Y    Q   R D   Y  +L  L +      AK++  +M   GI    
Sbjct: 388 SKVEEAMKL---YNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDL 444

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
             +   +    + G L  AM + + ++   +  ++   N  I  L    KL  A    E+
Sbjct: 445 YIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEK 504

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           +    + P+V+TYN +I  +C   ++  A  L  +M   GC+PDK++Y T++    + K+
Sbjct: 505 LPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKK 564

Query: 297 IKEVRDLMEKMV 308
           +++V +L+  MV
Sbjct: 565 LEKVVELLHMMV 576


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 253/552 (45%), Gaps = 39/552 (7%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D ++Y  ++  L K KL   A  +   M  +GI      ++ L+  +   G L+ A  
Sbjct: 200 KPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFS 259

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L+ M+   + P++   NT I  L    K+  A   L  M  A I P+V+TYN LI GY 
Sbjct: 260 LLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYF 319

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD- 316
            L+++K+A  +   M   G +P+  +Y T++  LCKEK + E   L E+M    N+  D 
Sbjct: 320 FLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEM-KYKNMIPDI 378

Query: 317 ------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                          +E A  L  +M + G  PDV +YT +++  C+ G L+ AK+  Q+
Sbjct: 379 VTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQR 438

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           +   G   N  +Y   +NGLC      EA ++ +  E +   P+AIT+  ++  L  + +
Sbjct: 439 LLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDE 498

Query: 425 LSEACDVVREMVKKGFF-----------------------PTPVEINLLIQSLCREGKMD 461
             +A  ++REM+ +G                         P  V    L+       ++ 
Sbjct: 499 NDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELK 558

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            AK         G   NV  +T +I G C+K  ++EA+SL ++M      P+ VTYT++I
Sbjct: 559 HAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLI 618

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--Q 579
           DAL KN  +E A  L+ +M   G+ P V +Y  ++   C+ GR+E   ++ +++L K   
Sbjct: 619 DALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYH 678

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                Y  +I  LC  G  +EA  +  K+       DA T  +++ +   K     A K+
Sbjct: 679 LNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKI 738

Query: 640 ACRMFNRNLIPD 651
              M  R L+ +
Sbjct: 739 LXEMIARGLMKE 750



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/557 (24%), Positives = 256/557 (45%), Gaps = 51/557 (9%)

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           +G +    ++  L+    + G+ +    +L  ++  +V P++++ NT IH L     L  
Sbjct: 162 QGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGD 221

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A      M + GI+PNV+TYN L+ G+C +  +K+A  L++EM LK  +PD  ++ T++ 
Sbjct: 222 ACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLID 281

Query: 290 YLCKEKRIKEVRDLMEKMVN--------------DSNLFHDQGRIEEAKELVNQMSQMGC 335
            L KE ++K  + ++  M+               D   F +  +++ AK +   M+Q G 
Sbjct: 282 ALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLN--KVKNAKYVFYSMAQSGV 339

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            P+V TYT +++G C+   +D+A  + ++M +    P+ V+YT+ ++GLC N     A  
Sbjct: 340 TPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIA 399

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +    +E+   P+  +Y++++  L + G+L  A +  + ++ KG+       N++I  LC
Sbjct: 400 LCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLC 459

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY--------- 506
           +      A     +   KGC  + + F ++I    +K + ++A  +L +M          
Sbjct: 460 KADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARK 519

Query: 507 ---------------LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
                           C K PD VTY T++D       ++ A  +   M   G+ P V  
Sbjct: 520 VRLKEAKIVLAVMTKACIK-PDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQC 578

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y  +I   C+   V++ + L E+M  K        Y  +I+ LC   +LE A  +L ++ 
Sbjct: 579 YTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMK 638

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE---- 665
               + D  +  +L++     G      + A  +F R L+    L  +V   +I E    
Sbjct: 639 EHGIQPDVYSYTILLDGLCKSG----RLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKA 694

Query: 666 GKSEEADTLMLRFVERG 682
           G  +EA  L  +  ++G
Sbjct: 695 GLFDEALDLQXKMEDKG 711



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 205/472 (43%), Gaps = 25/472 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+Y++ +          + +    +     P+L   N  ++       +  A   L  + 
Sbjct: 66  FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  PN +T N LIKG C    IK A+   D++  +G   ++VSY T++  LCK    K
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
            V  L+ K+   S                         PDVV Y  +++  C+   L  A
Sbjct: 186 AVARLLRKLEGHS-----------------------VKPDVVMYNTIIHSLCKNKLLGDA 222

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +  +M   G  PN V+Y A + G C  G   EA  ++N  + +   P+  T++ ++  
Sbjct: 223 CDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDA 282

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L +EGK+  A  V+  M+K    P  V  N LI       K+  AK         G   N
Sbjct: 283 LGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPN 342

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           V  +T++I G C++  ++EA+SL ++M      PD VTYT++ID L KN  +E A  L  
Sbjct: 343 VRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCK 402

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
           KM  +G+ P V +Y  ++   C+ GR+E+  +  +++L K        YN +I  LC   
Sbjct: 403 KMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKAD 462

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
              EA  +  K+       DA T   ++ +   K     A K+   M  R L
Sbjct: 463 LFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL 514



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 136/566 (24%), Positives = 250/566 (44%), Gaps = 47/566 (8%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  + +RG        + L+      G+++ A+Y    +       N +   T I+
Sbjct: 117 AFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLIN 176

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    +     R L +++   + P+V+ YN +I   C    + DA  L  EM +KG SP
Sbjct: 177 GLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISP 236

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDSNLFHD----QGRIEEAKELV 327
           + V+Y  ++   C    +KE   L+ +M        V   N   D    +G+++ AK ++
Sbjct: 237 NVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVL 296

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
             M +    PDVVTY ++++G+  + ++  AK +   M   G  PN  +YT  ++GLC  
Sbjct: 297 AVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKE 356

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
               EA  +    + +   P+ +TY+ ++ GL +   L  A  + ++M ++G  P     
Sbjct: 357 KMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSY 416

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            +L+ +LC+ G+++ AK+F Q  L KG  +NV  +  +I G C+     EA+ L   M  
Sbjct: 417 TILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEG 476

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV--------------------- 546
               PD +T+ TII AL +    ++A +++ +M+++GL                      
Sbjct: 477 KGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKAC 536

Query: 547 --PTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAG 602
             P VVTY T++  Y  V  ++    +   M  +        Y  +I+ LC    ++EA 
Sbjct: 537 IKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAM 596

Query: 603 KILGKVLRTASKADASTCHVLVES-----YLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
            +  ++       +  T   L+++     +L + I LL       M    + PD+     
Sbjct: 597 SLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLK-----EMKEHGIQPDVYSYTI 651

Query: 658 VSERLILEGKSEEADTLMLRFVERGH 683
           + + L   G+ E A  +  R + +G+
Sbjct: 652 LLDGLCKSGRLEGAKEIFQRLLVKGY 677



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 135/265 (50%), Gaps = 8/265 (3%)

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P T  +   L+ L +N        +    E    TP+  T +++M+       ++ A  V
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           +  ++K+G+ P  + +N LI+ LC  G++  A  F  + + +G  +N V++ +LI G C+
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G+ +    LL  +      PD V Y TII +L KN  + +A +L  +M+ KG+ P VVT
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKM----LSKQKCRTAYNQVIENLCSFGYLEEAGKILGK 607
           Y  +++ +C +G +++   LL +M    ++   C   +N +I+ L   G ++ A  +L  
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVC--TFNTLIDALGKEGKMKAAKIVLAV 298

Query: 608 VLRTASKADASTCHVLVESY--LNK 630
           +++   K D  T + L++ Y  LNK
Sbjct: 299 MMKACIKPDVVTYNSLIDGYFFLNK 323


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/557 (25%), Positives = 260/557 (46%), Gaps = 47/557 (8%)

Query: 173 ECRPEAFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           +C P   +Y ++ ++   +G+   A+ + S M++    PN+      I+ +    KL + 
Sbjct: 69  DCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEG 128

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
            R L+ M   G+ P+V TYN LI GYC    ++ A +++D M    C+P++ +Y  ++  
Sbjct: 129 RRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICG 188

Query: 291 LCKEKRIKEVRDLMEKM---------VNDSNLFHDQ---GRIEEAKELVNQMSQMGCIPD 338
            C++K +     L+ KM         V  ++L H Q   G ++ A  L+N M++ G +PD
Sbjct: 189 FCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPD 248

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
             TY+  ++  C+ G +++A  +   +   G K N V YTA ++G C  GK  +A  +++
Sbjct: 249 QWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLD 308

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
               E   PN+ TY+ ++ GL +E K+ EA  ++  M++KG   T     +LI ++ +EG
Sbjct: 309 RMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEG 368

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
             D A + + + ++ G   +V  +T+ I  FC +G+++EA  ++  M+     PD +TYT
Sbjct: 369 DFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYT 428

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI---------HRYCQVG------ 563
            +IDA    G +  A +++ +M   G  P+  TY  +I          +Y  V       
Sbjct: 429 LVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIP 488

Query: 564 --------------RVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILG 606
                         + E  L+L EKML +  C      Y ++I  LC  G L  A K+  
Sbjct: 489 NVFFADVADVWKMMKFETALELFEKML-EHGCSPNINTYAKLIIGLCKVGRLGVAQKLFD 547

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
            +         +  + L+      GI   A ++   M     +P L+    +   L  EG
Sbjct: 548 HMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEG 607

Query: 667 KSEEADTLMLRFVERGH 683
             E+A  +    ++ G+
Sbjct: 608 SKEKAKVVFSNLLQCGY 624



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 226/461 (49%), Gaps = 25/461 (5%)

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           + +A  V +MM K     N +     IH L    ++ + +   ++M+     P V TY  
Sbjct: 20  VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           ++    +  R  +AI L  EM  +GC P+  +Y  ++  +CKE +++E R ++++MV   
Sbjct: 80  IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV--- 136

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                               + G +P V TY A+++G+C+ G ++ A+++L  M+ + C 
Sbjct: 137 --------------------EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCN 176

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN  +Y   + G C       A  +++   E   TP+ +TY+ ++HG  + G L  A  +
Sbjct: 177 PNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRL 236

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           +  M + G  P     ++ I +LC++G+++ A         KG   N V +T+LI G+C+
Sbjct: 237 LNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCK 296

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G +++A SLLD M      P++ TY  +ID L K  +V+EA  LM  M+ KGL  TV T
Sbjct: 297 AGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPT 356

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y  +I    + G  +   ++L++M+S   Q     Y   I   C+ G ++EA  ++  + 
Sbjct: 357 YTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF 416

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
                 DA T  +++++Y   G+   A+ V  RMF+    P
Sbjct: 417 ERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDP 457



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 206/431 (47%), Gaps = 16/431 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  V  +M ++G  CR    SY  L+      G++   + +   M++    P +      
Sbjct: 23  AFSVFNMMPKKG--CRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVI 80

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +H L    +  +A+     M+  G  PN+ TY  +I   C   ++++  +++DEM  KG 
Sbjct: 81  VHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGL 140

Query: 278 SPDKVSYYTVMGYLCKEKRI---KEVRDLMEKMVNDSN---------LFHDQGRIEEAKE 325
            P   +Y  ++   CKE  +   +E+ DLM     + N          F  +  +  A  
Sbjct: 141 VPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMA 200

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+++M +    P VVTY ++++G C++G LD A ++L  M  +G  P+  +Y+ F++ LC
Sbjct: 201 LLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLC 260

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G+  EA  + N+ +E+    N + Y+ ++ G  + GK+ +A  ++  M+ +   P   
Sbjct: 261 KKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSS 320

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N LI  LC+E K+  A   M+  + KG    V  +T LI    ++GD + A  +LD M
Sbjct: 321 TYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQM 380

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 PD   YT  I A    G ++EA ++M  M  +G++P  +TY  VI  Y  +G +
Sbjct: 381 VSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLL 440

Query: 566 EDLLKLLEKML 576
                +L++M 
Sbjct: 441 NPAFDVLKRMF 451



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 217/498 (43%), Gaps = 54/498 (10%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y +M+  + K    +  +R+L  M  +G+      ++ L+  Y + G +  A  +L +M
Sbjct: 111 TYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLM 170

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
              +  PN    N  I        + +A+  L +M  + +TP+V+TYN LI G C +  +
Sbjct: 171 HSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYL 230

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
             A +L++ M   G  PD+ +Y   +  LCK                       +GRIEE
Sbjct: 231 DSAYRLLNLMNENGVVPDQWTYSVFIDTLCK-----------------------KGRIEE 267

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A  L N + + G   + V YTA+++G+C+ G++D A  +L +M    C PN+ +Y A ++
Sbjct: 268 ANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALID 327

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC   K  EA  ++ +  ++       TY++++  + +EG    A  ++ +MV  G+ P
Sbjct: 328 GLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQP 387

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
                   I + C  G +  A+  M     +G   + + +T +I  +   G L  A  +L
Sbjct: 388 DVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVL 447

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNG-----------------------------RVEEA 533
             M+    DP   TY+ +I  L K                               + E A
Sbjct: 448 KRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETA 507

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIEN 591
            EL  KML  G  P + TY  +I   C+VGR+    KL + M  +        YN ++  
Sbjct: 508 LELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNC 567

Query: 592 LCSFGYLEEAGKILGKVL 609
            C  G   +A +++G ++
Sbjct: 568 CCELGIYGDAVRLVGAMM 585



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 172/349 (49%), Gaps = 11/349 (3%)

Query: 345 VVNGFCRVGEL---------DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           +VNG+C++G L         + A  +   M   GC+ N VSYT  ++GLC  G+  E   
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +     E+   P   TY+V++H L   G+  EA ++  EM ++G  P      ++I ++C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           +E K++  ++ + E + KG   +V  + +LI G+C++G +E A  +LD M+    +P+  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY  +I    +   V  A  L+ KML   L P+VVTY ++IH  C++G ++   +LL  M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 576 LSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
                   +  Y+  I+ LC  G +EEA  +   +     KA+      L++ Y   G  
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             A  +  RM   + +P+      + + L  E K +EA  LM   +++G
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKG 349



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 118/527 (22%), Positives = 211/527 (40%), Gaps = 115/527 (21%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
            Y  +++   K  + + A+ +L LM      C P   +Y  L+  + R   +  AM +LS
Sbjct: 146 TYNALIDGYCKEGMVEAAQEILDLMHSN--SCNPNERTYNELICGFCRKKNVHRAMALLS 203

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP---------------- 244
            M ++ + P+++  N+ IH       L  A R L  M   G+ P                
Sbjct: 204 KMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKG 263

Query: 245 -------------------NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
                              N + Y  LI GYC   ++ DA  L+D M  + C P+  +Y 
Sbjct: 264 RIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYN 323

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDS---------------------------------- 311
            ++  LCKE++++E   LME M+                                     
Sbjct: 324 ALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSS 383

Query: 312 -------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                        + F  +G I+EA+++++ M + G +PD +TYT V++ +  +G L+ A
Sbjct: 384 GYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPA 443

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLN--------------GLCHNGKSL------------- 391
             +L++M+  GC P+  +Y+  +                LC +  ++             
Sbjct: 444 FDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMK 503

Query: 392 --EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
              A E+     E   +PN  TY+ ++ GL + G+L  A  +   M ++G  P+    N 
Sbjct: 504 FETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNS 563

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L+   C  G    A + +   +  G    + +   L  G  ++G  E+A  +  ++  C 
Sbjct: 564 LLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCG 623

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            + D V +  +ID L KNG  +  +EL+  M ++G      TYR +I
Sbjct: 624 YNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLI 670



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 157/353 (44%), Gaps = 6/353 (1%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  +++ L K +  Q A  ++  M ++G++C    ++ L+VA  + G    A  +L  M
Sbjct: 321 TYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQM 380

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
             +   P++ I    IH       + +A   +  M   G+ P+ LTY  +I  Y  L  +
Sbjct: 381 VSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLL 440

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG---- 318
             A  ++  M   GC P   +Y  ++ +L KE+  K+ +++       +  F D      
Sbjct: 441 NPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWK 500

Query: 319 --RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
             + E A EL  +M + GC P++ TY  ++ G C+VG L  A+K+   M   G  P+   
Sbjct: 501 MMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAI 560

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y + LN  C  G   +A  ++    E    P   + +V+  GL  EG   +A  V   ++
Sbjct: 561 YNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLL 620

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           + G+    V   +LI  L + G  DG  + +     +GC ++   +  LI G 
Sbjct: 621 QCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 119/291 (40%), Gaps = 45/291 (15%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           Y+ D  +Y   +         + A+ ++ +M  RG+   P+A +Y +V  AY   G L  
Sbjct: 385 YQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGV--MPDALTYTLVIDAYGGLGLLNP 442

Query: 195 AMYVLSMMQKAAVAP----------------------NLLICNTAIHVLVVG-------N 225
           A  VL  M      P                      N+ +C++  +V            
Sbjct: 443 AFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMM 502

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           K   AL   E+M   G +PN+ TY  LI G C + R+  A KL D M  +G SP +  Y 
Sbjct: 503 KFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYN 562

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQM 333
           +++   C+     +   L+  M+   +L             +++G  E+AK + + + Q 
Sbjct: 563 SLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQC 622

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           G   D V +  +++G  + G  D   ++L  M   GC+ +  +Y   + GL
Sbjct: 623 GYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/588 (24%), Positives = 264/588 (44%), Gaps = 57/588 (9%)

Query: 120 DERVALQFFYWAD-RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
           D  + L+FF WA  R +    D + +  +L++L+  ++    + VL  M  + ++   EA
Sbjct: 73  DAELGLKFFDWASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREA 132

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAA-VAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           FS L++AY+ +G L  A+ +   +++     P  +  N  ++ LV   K+  AL+  ++M
Sbjct: 133 FSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKM 192

Query: 238 ------------------------QLAGI---------------TPNVLTYNCLIKGYCD 258
                                    L  I                P+V+ YN +I GYC 
Sbjct: 193 LQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCK 252

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV---------- 308
              ++ A + ++E+ +KG  P   +Y  ++   CK    + V  L+ +M           
Sbjct: 253 KGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKV 312

Query: 309 --NDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
             N  +  +  G + EA E++ +M++MGC PD+ TY  ++N  C+ G +++A ++L++  
Sbjct: 313 FNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAK 372

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  PN  SYT  ++  C  G  ++A  M+    E     + ++Y   +HG+   G++ 
Sbjct: 373 ERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEID 432

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
            A  V  +M++KG FP     N+L+  LC++G++   K  + E L++    +V  F +LI
Sbjct: 433 VALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLI 492

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            GF + G+L+EA+ +   +     DP  V Y  +I    K G++ +A   + +M S    
Sbjct: 493 DGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHA 552

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGK 603
           P   TY TVI  Y +   +   LK+  +M+ K K +     Y  +I   C    +  A K
Sbjct: 553 PDEYTYSTVIDGYVKQHDMSSALKMFGQMM-KHKFKPNVITYTSLINGFCKKADMIRAEK 611

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           +   +       +  T   LV  +   G P  A  +   M     +P+
Sbjct: 612 VFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPN 659



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 225/522 (43%), Gaps = 36/522 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y M+++   K    Q A R L  +  +G+    E +  L+  + +AG+      +L+ 
Sbjct: 241 VFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTE 300

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    +  N+ + N  I        + +A   L RM   G  P++ TYN +I   C   R
Sbjct: 301 MAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGR 360

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK----------RIKEVRDLMEKMVNDS 311
           I++A +L+++   +G  P+K SY  +M   CK+           RI E+ +    +V+  
Sbjct: 361 IEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGE-KSDLVSYG 419

Query: 312 NLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
              H     G I+ A  +  +M + G  PD   Y  +++G C+ G +   K +L +M   
Sbjct: 420 AFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDR 479

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
             +P+   +   ++G   NG+  EA ++      +   P  + Y+ ++ G  + GK+++A
Sbjct: 480 NVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDA 539

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
              + EM      P     + +I    ++  M  A K   + +      NV+ +TSLI G
Sbjct: 540 LSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLING 599

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           FC+K D+  A  +   M      P+ VTYTT++    K G+ E AT +   ML  G +P 
Sbjct: 600 FCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPN 659

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-------------------AYNQVI 589
             T+  +I+             L+E+  SK+  R+                   AYN VI
Sbjct: 660 DATFHYLINGLTNTATSP---VLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVI 716

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
             LC  G ++ A  +L K+L      D+     L+    +KG
Sbjct: 717 VCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKG 758



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 114/469 (24%), Positives = 204/469 (43%), Gaps = 30/469 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y +M+    K    + A  +L     RG+   P  FSY  LM AY + G    A  
Sbjct: 344 DITTYNIMINFSCKGGRIEEADELLEKAKERGL--LPNKFSYTPLMHAYCKKGDYVKASG 401

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  + +     +L+     IH +VV  ++  AL   E+M   G+ P+   YN L+ G C
Sbjct: 402 MLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLC 461

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK----EKRIKEVRDLMEKMVNDSNL 313
              RI     L+ EM  +   PD   + T++    +    ++ IK  + ++ K V+   +
Sbjct: 462 KKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIV 521

Query: 314 FHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            ++         G++ +A   +N+M+ +   PD  TY+ V++G+ +  ++  A KM  QM
Sbjct: 522 GYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQM 581

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
             H  KPN ++YT+ +NG C     + A ++ +  +     PN +TY+ ++ G  + GK 
Sbjct: 582 MKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKP 641

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLC--------------REGKMDGAKKFMQECL 471
             A  +   M+  G  P     + LI  L               +E +      F    L
Sbjct: 642 ERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMML 701

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
             G    +  + S+I   C+ G ++ A  LL  M       D+V +T ++  L   G+ +
Sbjct: 702 LDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSK 761

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           E   ++   L+K  + T V Y   + +Y   GR+ +   +L+ ++   K
Sbjct: 762 EWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTLVEDSK 810



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 165/390 (42%), Gaps = 37/390 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  +Y +++  L K       K +L  M  R ++     F+ L+  + R G+L  A+ + 
Sbjct: 449 DAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIF 508

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            ++ +  V P ++  N  I       K+  AL  L  M      P+  TY+ +I GY   
Sbjct: 509 KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQ 568

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           H +  A+K+  +M      P+ ++Y +++   CK+       D++               
Sbjct: 569 HDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKA------DMI--------------- 607

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
              A+++ + M     +P+VVTYT +V GF + G+ ++A  + + M  +GC PN  ++  
Sbjct: 608 --RAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHY 665

Query: 380 FLNGLCHNGKSLEAREMINTSEEE--------------WWTPNAITYSVVMHGLRREGKL 425
            +NGL +   S    E  ++ E E               W      Y+ V+  L + G +
Sbjct: 666 LINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTV 725

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             A  ++ +M+ KGF    V    L+  LC +GK    +  +   LNK      V ++  
Sbjct: 726 DTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLT 785

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           +  +  +G L EA  +L  +    K  D V
Sbjct: 786 LDKYLYQGRLSEASVILQTLVEDSKFSDQV 815



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 154/336 (45%), Gaps = 26/336 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  V+  +++   +      A ++ +++ R+G++     ++ ++  + + GK+ +A+  L
Sbjct: 484 DVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCL 543

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M     AP+    +T I   V  + ++ AL+   +M      PNV+TY  LI G+C  
Sbjct: 544 NEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKK 603

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV------NDSN- 312
             +  A K+   M      P+ V+Y T++G   K  + +    + E M+      ND+  
Sbjct: 604 ADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATF 663

Query: 313 ---------------LFHDQGRIEEAKELVNQMSQM----GCIPDVVTYTAVVNGFCRVG 353
                          L  ++   E  + L+     M    G    +  Y +V+   C+ G
Sbjct: 664 HYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHG 723

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            +D A+ +L +M   G   ++V +TA L+GLCH GKS E R +I+    +     A+ YS
Sbjct: 724 TVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYS 783

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
           + +     +G+LSEA  +++ +V+   F   VE +L
Sbjct: 784 LTLDKYLYQGRLSEASVILQTLVEDSKFSDQVEKDL 819


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 243/492 (49%), Gaps = 28/492 (5%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A +   LM R  I     +F+ L+ A ++         +   M  A ++PN    N  I+
Sbjct: 80  ALQFFDLMMRSII-----SFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILIN 134

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L   N++ + L  +  +   G  P+V+TY  LIKG C  HRI +A +L   M   GC P
Sbjct: 135 CLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWP 194

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------------NLFHDQ----GRIE 321
           + V+Y T++  LC+   I     L ++M+N +              N+  D+    G+ +
Sbjct: 195 NVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWK 254

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EAK L N+M   G  PDVVT++A+++  C+ G + +AKK L+ M   G  P+  ++T+ +
Sbjct: 255 EAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLI 314

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
            G C  G    A+E+  +   + + P+ I+Y+V+++G  +   + EA  +  EM++ G +
Sbjct: 315 EGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKW 374

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P      +L++ L   GK+  AKK            N+   +  + G C+ G L EA+ L
Sbjct: 375 PDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMEL 434

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            +++       D  ++  +ID L K  ++E A EL  K+  +GL P VVTY  +I+ +C+
Sbjct: 435 FNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCK 494

Query: 562 VGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
            G+V++   +L +M+ +  C      Y+ ++        LEE  K+L K+++      AS
Sbjct: 495 NGQVDN-ANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAAS 553

Query: 619 TCHVLVESYLNK 630
             + +VE  ++K
Sbjct: 554 I-YTIVEDMVSK 564



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 230/475 (48%), Gaps = 28/475 (5%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           ALQFF   D   R     I + ++L  L+K K       + + M   G+       + L+
Sbjct: 80  ALQFF---DLMMR---SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILI 133

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
                  ++R  +  ++ + +    P+++   + I  L + +++++A R   RMQ  G  
Sbjct: 134 NCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCW 193

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG-------CSPDKVSYYTVMGYLCKEKR 296
           PNV+TY  LIKG C    I  A+KL  EM L G       C P+  SY  ++  LCK  +
Sbjct: 194 PNVVTYGTLIKGLCRTGNINLALKLHQEM-LNGTSPYAINCKPNIFSYNIIIDELCKIGK 252

Query: 297 IKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            KE + L  +MV+              +    +G + EAK+ +  M   G +PD+ T+T+
Sbjct: 253 WKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTS 312

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++ GFC VG+LD AK++   M   G +P+ +SYT  + G C      EA ++ N      
Sbjct: 313 LIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVG 372

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI-NLLIQSLCREGKMDGA 463
             P+  T+ V++ GL   GK+ +A  +   +VK    P  + I ++ +  LC+ G +  A
Sbjct: 373 KWPDMKTFCVLLKGLFLAGKVGDAKKLFG-VVKPHAVPKNLYICSVFLDGLCKNGCLFEA 431

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            +   E  +    +++ +F  LI G C+   LE A  L + +      PD VTY  +I+ 
Sbjct: 432 MELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMING 491

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
             KNG+V+ A  L   M   G  P ++TY  ++H + +  ++E+++KLL KM+ K
Sbjct: 492 FCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQK 546



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 214/445 (48%), Gaps = 36/445 (8%)

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+    +M ++ ++ NLL+       L      ++     ++M LAG++PN  T N LI 
Sbjct: 80  ALQFFDLMMRSIISFNLLL-----GALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILIN 134

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
             C+++R+++ +  +  +  +G  PD V+Y +++  LC E                    
Sbjct: 135 CLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEH------------------- 175

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM------YHH 368
               RI EA  L  +M ++GC P+VVTY  ++ G CR G ++ A K+ Q+M      Y  
Sbjct: 176 ----RISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAI 231

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
            CKPN  SY   ++ LC  GK  EA+ + N   ++   P+ +T+S ++  L +EG + EA
Sbjct: 232 NCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEA 291

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
              +  M+ +G  P       LI+  C  G +D AK+      +KG   +V+++T LI G
Sbjct: 292 KKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYG 351

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +C+  ++EEA+ L ++M    K PD  T+  ++  L   G+V +A +L   +    +   
Sbjct: 352 YCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKN 411

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILG 606
           +      +   C+ G + + ++L  ++ S        ++N +I+ LC    LE A ++  
Sbjct: 412 LYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFE 471

Query: 607 KVLRTASKADASTCHVLVESYLNKG 631
           K+ +   + D  T  +++  +   G
Sbjct: 472 KLSQEGLQPDVVTYCIMINGFCKNG 496



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 146/337 (43%), Gaps = 47/337 (13%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y ++++ L K    + AKR+   M  +G+      FS L+    + G +  A   L  M 
Sbjct: 240 YNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMM 299

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
              + P+L    + I    +   L  A      M   G  P+V++Y  LI GYC    ++
Sbjct: 300 LRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVE 359

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVM----------------------------------- 288
           +A+KL +EM   G  PD  ++  ++                                   
Sbjct: 360 EAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFL 419

Query: 289 GYLCKEKRIKEVRDLMEKM--------VNDSNLFHD----QGRIEEAKELVNQMSQMGCI 336
             LCK   + E  +L  ++        +   N   D      ++E A EL  ++SQ G  
Sbjct: 420 DGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQ 479

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PDVVTY  ++NGFC+ G++D A  + Q M  +GC PN ++Y+A L+G   N K  E  ++
Sbjct: 480 PDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKL 539

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
           ++   ++  +  A  Y++V   + ++ K  E  D+++
Sbjct: 540 LHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQ 576



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 8/247 (3%)

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           +  NLL+ +L +           ++    G + N      LI   C    + E LS +  
Sbjct: 92  ISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAG 151

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           +      PD VTYT++I  L    R+ EAT L ++M   G  P VVTY T+I   C+ G 
Sbjct: 152 IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN 211

Query: 565 VEDLLKLLEKMLSKQ-----KCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           +   LKL ++ML+        C+    +YN +I+ LC  G  +EA ++  +++    + D
Sbjct: 212 INLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPD 271

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
             T   L+++   +G+ + A K    M  R ++PDL     + E   L G  + A  L L
Sbjct: 272 VVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFL 331

Query: 677 RFVERGH 683
               +G+
Sbjct: 332 SMPSKGY 338


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 218/464 (46%), Gaps = 39/464 (8%)

Query: 149 EILSKTKLCQGAKRVLRL-----MARRGIECRPEA----FSYLMVAYSRAGKLRNAMYVL 199
           E LSKT+L     R ++L     + R  ++ RP      F+ L+ A  +  K    + + 
Sbjct: 54  ERLSKTRL-----RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLG 108

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+   +  +L   N  I+      +++ AL  L +M   G  P+ +T   L+ G+C  
Sbjct: 109 KKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRR 168

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           +R+ DA+ L+D+M   G  PD V+Y  ++  LCK +R+ +  D           F + GR
Sbjct: 169 NRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDF----------FKEIGR 218

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                         G  P+VVTYTA+VNG C  G  + A ++L+ M      PN ++Y+A
Sbjct: 219 -------------KGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSA 265

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L+    NGK LEA+E+          P+ +TYS +++GL    ++ EA  +   MV KG
Sbjct: 266 LLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
            FP  V  N LI   C+  +++   K  ++   +G   N V + +LI+GF Q GD+++A 
Sbjct: 326 CFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQ 385

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
                M      PD  TY  ++  L  NG +E+A  +   M    +   +VTY TVI   
Sbjct: 386 EFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGM 445

Query: 560 CQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEA 601
           C+ G+VED   L   +  K  +     Y  ++  LC+ G   E 
Sbjct: 446 CKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEV 489



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 210/442 (47%), Gaps = 14/442 (3%)

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VND----- 310
           ++ DAI L  EM      P  V +  ++  + K K+   V  L +KM      ND     
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 311 --SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
              N F    ++  A  ++ +M ++G  PD VT  ++VNGFCR   +  A  ++ +M   
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G +P+ V+Y A ++ LC   +  +A +       +   PN +TY+ +++GL   G+ ++A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             ++R+M+K+   P  +  + L+ +  + GK+  AK+  +E +      ++V ++SLI G
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C    ++EA  + D M      PD V+Y T+I+   K  RVE+  +L  KM  +GLV  
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILG 606
            VTY T+I  + QVG V+   +   +M S         YN ++  LC  G LE+A  I  
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFE 424

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
            + ++    D  T   +++     G    A+ + C +  + L PD+     +   L  +G
Sbjct: 425 DMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484

Query: 667 KSEEADTLMLRFVERGHIQPKS 688
              E + L  +  + G ++  S
Sbjct: 485 LQHEVEALYTKMKQEGLMKNDS 506



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 157/324 (48%), Gaps = 27/324 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           YR D + Y  +++ L KT+    A    + + R+GI  RP   +Y  L+     +G+  +
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGI--RPNVVTYTALVNGLCNSGRWND 243

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +L  M K  + PN++  +  +   V   K+ +A    E M    I P+++TY+ LI 
Sbjct: 244 AARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLIN 303

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G C   RI +A ++ D M  KGC PD VSY T++   CK K                   
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAK------------------- 344

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
               R+E+  +L  +MSQ G + + VTY  ++ GF +VG++D+A++   QM   G  P+ 
Sbjct: 345 ----RVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDI 400

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +Y   L GLC NG   +A  +    ++     + +TY+ V+ G+ + GK+ +A  +   
Sbjct: 401 WTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCS 460

Query: 435 MVKKGFFPTPVEINLLIQSLCREG 458
           +  KG  P  V    ++  LC +G
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKG 484



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 4/265 (1%)

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           R+ KL +A ++ REMVK   FP+ V+ N L+ ++ +  K D      ++    G   ++ 
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            F  +I  FC    +  ALS+L  M     +PD VT  ++++   +  RV +A  L+ KM
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGY 597
           +  G  P +V Y  +I   C+  RV D L    K + ++  R     Y  ++  LC+ G 
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFF-KEIGRKGIRPNVVTYTALVNGLCNSGR 240

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
             +A ++L  +++     +  T   L+++++  G  L A ++   M   ++ PD+     
Sbjct: 241 WNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSS 300

Query: 658 VSERLILEGKSEEADTLMLRFVERG 682
           +   L L  + +EA+ +    V +G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKG 325



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 6/207 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++    K K  +   ++ R M++RG+      ++ L+  + + G +  A    
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFF 388

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S M    V+P++   N  +  L     L KAL   E MQ + +  +++TY  +I+G C  
Sbjct: 389 SQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKT 448

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK------MVNDSNL 313
            +++DA  L   + LKG  PD V+Y T+M  LC +    EV  L  K      M NDS L
Sbjct: 449 GKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSML 508

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVV 340
               G I  + EL+ +M   G  P ++
Sbjct: 509 CLGDGDITISAELIKKMLSCGYAPSLL 535


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 239/500 (47%), Gaps = 62/500 (12%)

Query: 167 MARRGIECRPE----AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           +A+R  E  P     +F  L   Y RAG+  +A+ VL  M       NL++CNT +    
Sbjct: 163 LAQRVFEAMPVRNEFSFGILARGYCRAGRSVDALKVLDGMPSM----NLVVCNTVVAGFC 218

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP---LKGCS- 278
               + +A R +ERM++ G+ PNV+T+N  I   C   R+ DA ++  +M      G   
Sbjct: 219 KEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPR 278

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPD 338
           PD+V++  ++   C                       D G ++EA+ LV+ M   G +  
Sbjct: 279 PDQVTFDVMLSGFC-----------------------DAGFVDEARVLVDIMRCGGFLRR 315

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V +Y   ++G  R G + +A ++L++M H    PN+ +Y   ++GLC  GK+ +AR + N
Sbjct: 316 VESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVEN 375

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                  +P+ +TY+ ++H    +G ++ A  ++ EM +KG  P     N+L+QSL R G
Sbjct: 376 FIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAG 435

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD------- 511
           +   A++ ++    KG +++      +I G C+   L+ A+ ++D M+            
Sbjct: 436 RTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGN 495

Query: 512 ----------------PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
                           PD +TY+ +I AL K GR +EA + +++M+ K + P  V Y T 
Sbjct: 496 SFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTF 555

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTA 612
           IH YC+ G+    +K+L  M  K+ C  +   YN +I         +E  K++ ++    
Sbjct: 556 IHGYCKHGKTSLAIKVLRDM-EKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKG 614

Query: 613 SKADASTCHVLVESYLNKGI 632
              +  T + L++S+  +G+
Sbjct: 615 VSPNVLTYNSLIKSFCQQGM 634



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 201/438 (45%), Gaps = 50/438 (11%)

Query: 153 KTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQK----AAVA 208
           K  L + A+R++  M  +G+      F+  + A  +AG++ +A  +   MQ+        
Sbjct: 219 KEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPR 278

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           P+ +  +  +        + +A   ++ M+  G    V +YN  + G     R+ +A +L
Sbjct: 279 PDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHEL 338

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVN 328
           + EM  +   P+  +Y  ++  LCKE                       G+  +A+ + N
Sbjct: 339 LREMAHERIHPNSYTYNIIVSGLCKE-----------------------GKAFDARRVEN 375

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            +      PDVVTYT++++ +C  G +  A ++L +M   GC PN+ +Y   L  L   G
Sbjct: 376 FIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAG 435

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF-------- 440
           ++ EA  ++    E+ ++ +    ++++ GL R  KL  A  +V  M ++G         
Sbjct: 436 RTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGN 495

Query: 441 ---------------FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
                           P  +  ++LI +LC+EG+ D AKK + E + K  + + V + + 
Sbjct: 496 SFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTF 555

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G+C+ G    A+ +L DM     +P T TY  +I    +  + +E  +LM +M  KG+
Sbjct: 556 IHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGV 615

Query: 546 VPTVVTYRTVIHRYCQVG 563
            P V+TY ++I  +CQ G
Sbjct: 616 SPNVLTYNSLIKSFCQQG 633



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 176/398 (44%), Gaps = 49/398 (12%)

Query: 124 ALQFFYWADRQWRY---RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
           A + F      W++   R D + + +ML           A+ ++ +M   G   R E+++
Sbjct: 261 AYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYN 320

Query: 181 YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
             +    R G++  A  +L  M    + PN    N  +  L    K   A R    ++  
Sbjct: 321 RWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSG 380

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
            ++P+V+TY  L+  YC    I  A +++DEM  KGC+P+  +Y  ++  L +       
Sbjct: 381 VMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWR------- 433

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                            GR  EA+ L+ +MS+ G   D      +++G CR  +LD A  
Sbjct: 434 ----------------AGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMG 477

Query: 361 MLQQMYHHG-----------------------CKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           ++  M+  G                       C P+ ++Y+  ++ LC  G+  EA++ +
Sbjct: 478 IVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKL 537

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
                +  +P+++ Y   +HG  + GK S A  V+R+M KKG  P+    NLLI+    +
Sbjct: 538 LEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEK 597

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            K D   K M E   KG + NV+ + SLI+ FCQ+G L
Sbjct: 598 HKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGML 635



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 137/305 (44%), Gaps = 35/305 (11%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +LR MA   I      ++ ++    + GK  +A  V + ++   ++P+++   + +H
Sbjct: 335 AHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLH 394

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  +A A R L+ M   G  PN  TYN L++      R  +A +L++ M  KG S 
Sbjct: 395 AYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSL 454

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM------------------VNDSNLFH------ 315
           D      ++  LC+  ++     +++ M                  V+DS++        
Sbjct: 455 DTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDR 514

Query: 316 -----------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                       +GR +EAK+ + +M      PD V Y   ++G+C+ G+   A K+L+ 
Sbjct: 515 ITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRD 574

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   GC P+T +Y   + G     KS E  ++++  EE+  +PN +TY+ ++    ++G 
Sbjct: 575 MEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGM 634

Query: 425 LSEAC 429
           L+  C
Sbjct: 635 LTRPC 639



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 156/371 (42%), Gaps = 45/371 (12%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           + R++  + L   +   G  PDV T   ++   C  G ++ A+++ + M       N  S
Sbjct: 123 ESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRVFEAMPVR----NEFS 178

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           +     G C  G+S++A ++++       + N +  + V+ G  +EG + EA  +V  M 
Sbjct: 179 FGILARGYCRAGRSVDALKVLDGMP----SMNLVVCNTVVAGFCKEGLVEEAERLVERMR 234

Query: 437 KKGFFPTPVEINLLIQSLCREGK-MDGAKKF--MQECLNKGCA-VNVVNFTSLIRGFCQK 492
            +G  P  V  N  I +LC+ G+ +D  + F  MQE    G    + V F  ++ GFC  
Sbjct: 235 VQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDA 294

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G ++EA  L+D M          +Y   +  L +NGRV EA EL+ +M  + + P   TY
Sbjct: 295 GFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTY 354

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
                                            N ++  LC  G   +A ++   +    
Sbjct: 355 ---------------------------------NIIVSGLCKEGKAFDARRVENFIRSGV 381

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
              D  T   L+ +Y +KG    A ++   M  +   P+      + + L   G++ EA+
Sbjct: 382 MSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAE 441

Query: 673 TLMLRFVERGH 683
            L+ R  E+G+
Sbjct: 442 RLLERMSEKGY 452


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 161/657 (24%), Positives = 291/657 (44%), Gaps = 70/657 (10%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQ--ICAVLRSQADERVALQFFYWADRQ 134
           +V++   +I+    W   LE    + L +  P     C +     D  + L+FF+WA +Q
Sbjct: 1   MVKDAIYIIKTDPEWQESLE---THFLDTEIPASDIACHMFDQIHDPEMGLEFFHWASKQ 57

Query: 135 ---WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGK 191
                Y ++     ++  +  +    +  + +L++M  + +    EAFS ++  ++  G 
Sbjct: 58  SNCGNYLNEFSCSSLLRLLARRRLFSE-VESLLKIMKSKDLMPTREAFSLVISVFADCGL 116

Query: 192 LRNAM-YVLSMMQKAAVAPNLLICNTAIHVLV---------------------VGN---- 225
           +  A+ +  + ++     P++  CN+ ++VLV                     V N    
Sbjct: 117 VDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVC 176

Query: 226 ----------KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
                     K+    + +E+    G  PN++ YN LI GYC     + A  L  E+ +K
Sbjct: 177 IMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMK 236

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------------VNDSNLFHDQGRIE 321
           G  P   +Y  ++   CK+ + + V  L+ +M              + D+   H  G   
Sbjct: 237 GFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKH--GCRI 294

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA + V  M + GC PD+ TY  ++ G C  GE+ +A+++L+Q    G  PN VSYT  +
Sbjct: 295 EAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLI 354

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +  C  G+ L A +++    E    P+ +TY+ ++HGL   G++  A  V  +MV+KG  
Sbjct: 355 HNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVL 414

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P     N+L+  LC++G++  AK  + E L++  A +     +L+ GF + GD EEA  L
Sbjct: 415 PDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKL 474

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            +       DP  V Y  +I    K G +++A     +M+     P   TY T+I  Y +
Sbjct: 475 FELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIK 534

Query: 562 VGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           +  +   L++   M+ K  C+     Y  +I   C  G +  A K   ++L    K +  
Sbjct: 535 MNDLHGALRMFGLMV-KGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVV 593

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           T  +L+  +  KG+ L     AC  F + L+    L   V+   ++ G +   D ++
Sbjct: 594 TYTILIGCFC-KGVNLTK---ACSFFEQMLMEKC-LPNDVTYNYLMNGLTNNVDFVI 645



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 129/582 (22%), Positives = 247/582 (42%), Gaps = 41/582 (7%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDP-IVYY-MMLEILSKTKLCQGAKRVLRLMA 168
           +C +++    E      +   +++W     P IV+Y  +++   K    + A  + + + 
Sbjct: 175 VCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELK 234

Query: 169 RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
            +G     + +  ++  + + GK      +L  M +  +  ++ I N  I          
Sbjct: 235 MKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRI 294

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           +A   +  M  +G  P++ TYN LI G C    +  A +L+++   +G  P+KVSY  ++
Sbjct: 295 EAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLI 354

Query: 289 GYLCKEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCI 336
              CK+       DL+ KM         V  + L H     G ++ A  + N+M + G +
Sbjct: 355 HNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVL 414

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PD   Y  +++G C+ G L  AK +L +M      P+       ++G   +G   EA+++
Sbjct: 415 PDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKL 474

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
              + E+   P  + Y+ ++ G  + G + +A    + M++    P     + +I    +
Sbjct: 475 FELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIK 534

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
              + GA +     +   C  NVV +T LI GFC  GD+  A      M   +  P+ VT
Sbjct: 535 MNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVT 594

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           YT +I    K   + +A     +ML +  +P  VTY  +++          L   ++ ++
Sbjct: 595 YTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMN---------GLTNNVDFVI 645

Query: 577 SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC---HVLVESYLNKGIP 633
           S Q+     N ++  L SFG +       G   R AS      C   H +V+  L+    
Sbjct: 646 SNQRSEQTENSLV--LESFGMMISD----GWDRRAASYNSILICLCQHKMVKHALH---- 695

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
                +  +M ++  +PD      +   L LEG+S++ + ++
Sbjct: 696 -----LRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVI 732


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 163/685 (23%), Positives = 281/685 (41%), Gaps = 89/685 (12%)

Query: 78  VREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRY 137
           V ++C ++E    W P  E  L  L    +P  +  VLR   D   A+++F W +R+   
Sbjct: 36  VNDICNVLE-TGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTEL 94

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
            H P  Y  +L ++++ +      ++L  M+  G          +++   +A KLR    
Sbjct: 95  PHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYD 154

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V+ MM+K    P      T I      N     L   ++MQ  G  P V  +  LI+G+ 
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214

Query: 258 DLHRIKDAIKLIDEMP-----------------------------------LKGCSPDKV 282
              R+  A+ L+DEM                                      G  PD+V
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQM 330
           +Y +++G LCK  R+ E  ++ E +  +  +            +   G+ +EA  L+ + 
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              G IP V+ Y  ++    ++G++D+A K+ ++M      PN  +Y   ++ LC  GK 
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKL 393

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             A E+ ++ ++    PN  T ++++  L +  KL EAC +  EM  K   P  +    L
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY--LC 508
           I  L + G++D A K  ++ L+  C  N + +TSLI+ F   G  E+   +  DM    C
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513

Query: 509 KKD---------------------------------PDTVTYTTIIDALSKNGRVEEATE 535
             D                                 PD  +Y+ +I  L K G   E  E
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
           L   M  +G V     Y  VI  +C+ G+V    +LLE+M +K  +     Y  VI+ L 
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
               L+EA  +  +      + +      L++ +   G    AY +   +  + L P+L 
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693

Query: 654 LCKKVSERLILEGKSEEADTLMLRF 678
               + + L+   K+EE +  ++ F
Sbjct: 694 TWNSLLDALV---KAEEINEALVCF 715



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 234/493 (47%), Gaps = 17/493 (3%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           A++ ++    + GK+  A+ V   M+K A APNL   N  I +L    KL  A    + M
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSM 403

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           Q AG+ PNV T N ++   C   ++ +A  + +EM  K C+PD++++ +++  L K  R+
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463

Query: 298 KEVRDLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            +   + EKM+ DS+              F + GR E+  ++   M    C PD+     
Sbjct: 464 DDAYKVYEKML-DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
            ++   + GE ++ + M +++      P+  SY+  ++GL   G + E  E+  + +E+ 
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
              +   Y++V+ G  + GK+++A  ++ EM  KGF PT V    +I  L +  ++D A 
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
              +E  +K   +NVV ++SLI GF + G ++EA  +L+++      P+  T+ +++DAL
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCR 582
            K   + EA      M      P  VTY  +I+  C+V +        ++M  +  +   
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
            +Y  +I  L   G + EAG +  +        D++  + ++E   N    + A+ +   
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822

Query: 643 MFNRNLIPDLKLC 655
              R L    K C
Sbjct: 823 TRRRGLPIHNKTC 835



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 223/529 (42%), Gaps = 63/529 (11%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           I Y  +L  L K      A +V   M +   +  P   +Y  L+    RAGKL  A  + 
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMKK---DAAPNLSTYNILIDMLCRAGKLDTAFELR 400

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             MQKA + PN+   N  +  L    KL +A    E M     TP+ +T+  LI G   +
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKV 460

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R+ DA K+ ++M    C  + + Y +++       R ++   + + M+N +        
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520

Query: 312 NLFHD---------------------------------------QGRIEEAKELVNQMSQ 332
           N + D                                        G   E  EL   M +
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            GC+ D   Y  V++GFC+ G++++A ++L++M   G +P  V+Y + ++GL    +  E
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A  +   ++ +    N + YS ++ G  + G++ EA  ++ E+++KG  P     N L+ 
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           +L +  +++ A    Q      C  N V +  LI G C+     +A     +M      P
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
            T++YTT+I  L+K G + EA  L  +  + G VP    Y  +I       R  D   L 
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820

Query: 573 EKM------LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
           E+       +  + C    + + +N C    LE+A  I+G VLR   KA
Sbjct: 821 EETRRRGLPIHNKTCVVLLDTLHKNDC----LEQAA-IVGAVLRETGKA 864



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/292 (19%), Positives = 124/292 (42%), Gaps = 23/292 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++   K      A ++L  M  +G E     +  ++   ++  +L  A  + 
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
              +   +  N++I ++ I       ++ +A   LE +   G+TPN+ T+N L+      
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             I +A+     M    C+P++V+Y  ++  LCK ++            N + +F     
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF-----------NKAFVFW---- 750

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                    +M + G  P  ++YT +++G  + G + +A  +  +   +G  P++  Y A
Sbjct: 751 --------QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            + GL +  ++++A  +   +       +  T  V++  L +   L +A  V
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIV 854


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 247/518 (47%), Gaps = 31/518 (5%)

Query: 150  ILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA-MYVLSMMQKAAVA 208
            + ++ +L + A  V   M+ RG+      + Y++V Y R G +  A  ++  MM++  V 
Sbjct: 805  VAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVV 864

Query: 209  PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
             N  +    I      + + +A+ F  ++   G++PN++ Y+ +I G C    +K A +L
Sbjct: 865  DNATL-TLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFEL 923

Query: 269  IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-------------FH 315
            ++EM   G  P+  ++ +++  LCK+   +    L  K++   N              + 
Sbjct: 924  LEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYC 983

Query: 316  DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             + ++  A+ L  +M + G +P+  TYT +++G C+ G   +A ++++ M + G  PNT 
Sbjct: 984  KEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTC 1043

Query: 376  SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            +Y + ++GLC  G++ EA +++NT  +     + +TY++++    +   +++A   + +M
Sbjct: 1044 TYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKM 1103

Query: 436  VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
             K GF P       LI + CR+  M  ++K   E +  G A     +TS+I G+C++  +
Sbjct: 1104 FKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKV 1163

Query: 496  EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
              A+     M      PD+++Y  +I  L K  R++EA +L   M+ KGL P  VT  T+
Sbjct: 1164 SLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTL 1223

Query: 556  IHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
             + YC+       + +LE++  K   RT +  +I  LC    +  A     K+L      
Sbjct: 1224 TYEYCKTEDFASAMVILERLNKKLWIRTVHT-LIRKLCCEKKVALAALFFHKLLDKEVNV 1282

Query: 616  DASTCHVLVESYLNKGIPLLAYKVACRMFNR-NLIPDL 652
            D  T              L A+  AC   N+  L+ DL
Sbjct: 1283 DRVT--------------LAAFNTACIESNKYALVSDL 1306



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/574 (22%), Positives = 238/574 (41%), Gaps = 78/574 (13%)

Query: 113  AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGI 172
            A+L S+    VAL FFYWA    ++R     Y+M L I+            + L+ +  +
Sbjct: 713  ALLASEEGSMVALSFFYWAVGFPKFR-----YFMRLYIVC----------TMSLVGKCNL 757

Query: 173  ECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
            E   E    ++  ++  GKL+ A+ ++  M+   +     + N  I V       A  +R
Sbjct: 758  ERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILV-------AAEMR 810

Query: 233  FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY-YTVMGYL 291
             +E                             A  + DEM  +G  PD  +Y Y ++GY 
Sbjct: 811  LVEY----------------------------AGNVFDEMSARGVYPDSCTYKYIIVGY- 841

Query: 292  CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
            C+                        G + EA   + +M + G + D  T T ++  FC 
Sbjct: 842  CR-----------------------NGNVLEADRWICEMMERGFVVDNATLTLIITAFCE 878

Query: 352  VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
               +++A     ++   G  PN ++Y++ ++GLC  G   +A E++    +  W PN  T
Sbjct: 879  KSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYT 938

Query: 412  YSVVMHGLRREGKLSEACDVVREMVKK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            ++ ++HGL ++G    A  +  ++++   + P       +I   C+E K+  A+   +  
Sbjct: 939  HTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERM 998

Query: 471  LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
              +G   N   +T+LI G C+ G+  +A  L++ M      P+T TY +I+D L K GR 
Sbjct: 999  KEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRA 1058

Query: 531  EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQV 588
            EEA +L+       +    VTY  +I   C+   +   L  L KM  +  Q     Y  +
Sbjct: 1059 EEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTL 1118

Query: 589  IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
            I   C    ++++ K+  +V++        T   ++  Y  +    LA K   +M +   
Sbjct: 1119 IAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGC 1178

Query: 649  IPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             PD      +   L  E + +EA  L    +++G
Sbjct: 1179 APDSISYGALISGLCKESRLDEARQLYDTMIDKG 1212


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 223/468 (47%), Gaps = 26/468 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI      +S  +  + R  +L  A+ +L  M K    P+++  N+ ++    GN+
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +++A+  +++M   G  P+ +T+  L+ G    ++  +A+ L++ M +KGC PD V+Y  
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           V+  LCK        +L+ KM        ++G+IE                DVV Y  ++
Sbjct: 221 VINGLCKRGEPDLALNLLNKM--------EKGKIE---------------ADVVIYNTII 257

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C+   +D A  +  +M   G KP+  +Y   ++ LC+ G+  +A  +++   E+   
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVK-KGFFPTPVEINLLIQSLCREGKMDGAKK 465
           P+ + ++ ++    +EGKL EA  +  EMVK K  FP  V  N LI+  C+  +++   +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             +E   +G   N V +T+LI GF Q  D + A  +   M      PD +TY  ++D L 
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
            NG VE A  +   M  + +   +VTY T+I   C+ G+VED   L   +  K  +    
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            Y  ++   C  G  EEA  +  ++       ++ T + L+ + L  G
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 242/512 (47%), Gaps = 29/512 (5%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           KL +A+ +   M K+   P+++  +  +  +   NK    +   E+MQ  GI+ N+ TY+
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
             I  +C   ++  A+ ++ +M   G  P  V+  +++   C   RI             
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI------------- 161

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                      EA  LV+QM +MG  PD VT+T +V+G  +  +  +A  ++++M   GC
Sbjct: 162 ----------SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 211

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P+ V+Y A +NGLC  G+   A  ++N  E+     + + Y+ ++ GL +   + +A D
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +  +M  KG  P     N LI  LC  G+   A + + + L K    ++V F +LI  F 
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331

Query: 491 QKGDLEEALSLLDDMYLCKK-DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           ++G L EA  L D+M   K   PD V Y T+I    K  RVEE  E+  +M  +GLV   
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
           VTY T+IH + Q    ++   + ++M+S         YN +++ LC+ G +E A  +   
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEY 451

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           + +   K D  T   ++E+    G     + + C +  + + P++     +      +G 
Sbjct: 452 MQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 511

Query: 668 SEEADTLMLRFVERGHIQPKSEEH--LQRQRV 697
            EEAD L +   E G + P S  +  L R R+
Sbjct: 512 KEEADALFVEMKEDGPL-PNSGTYNTLIRARL 542



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 208/452 (46%), Gaps = 13/452 (2%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           H+   Y + +    +      A  +L  M + G        + L+  +    ++  A+ +
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +  M +    P+ +   T +H L   NK ++A+  +ERM + G  P+++TY  +I G C 
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH 315
                 A+ L+++M       D V Y T++  LCK K + +  DL  KM       ++F 
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287

Query: 316 ---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                    + GR  +A  L++ M +    PD+V + A+++ F + G+L +A+K+  +M 
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347

Query: 367 HHG-CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
               C P+ V+Y   + G C   +  E  E+     +     N +TY+ ++HG  +    
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             A  V ++MV  G  P  +  N+L+  LC  G ++ A    +    +   +++V +T++
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I   C+ G +E+   L   + L    P+ VTYTT++    + G  EEA  L ++M   G 
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           +P   TY T+I    + G      +L+++M S
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 200/424 (47%), Gaps = 28/424 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           Y+ D + +  ++  L +      A  ++  M  +G  C+P+  +Y  V     + G+   
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG--CQPDLVTYGAVINGLCKRGEPDL 233

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ +L+ M+K  +  +++I NT I  L     +  A     +M+  GI P+V TYN LI 
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
             C+  R  DA +L+ +M  K  +PD V +  ++    KE ++ E   L ++MV   +  
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH-- 351

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
                               C PDVV Y  ++ GFC+   +++  ++ ++M   G   NT
Sbjct: 352 --------------------CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+YT  ++G         A+ +      +   P+ +TY++++ GL   G +  A  V   
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEY 451

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKM-DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           M K+      V    +I++LC+ GK+ DG   F    L KG   NVV +T+++ GFC+KG
Sbjct: 452 MQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL-KGVKPNVVTYTTMMSGFCRKG 510

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
             EEA +L  +M      P++ TY T+I A  ++G    + EL+ +M S G      T+ 
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570

Query: 554 TVIH 557
            V +
Sbjct: 571 LVTN 574



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 3/204 (1%)

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           +L R   Q   L++A+ L  DM   +  P  V ++ ++ A++K  + +    L  +M + 
Sbjct: 45  NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEA 601
           G+   + TY   I+ +C+  ++   L +L KM  L         N ++   C    + EA
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
             ++ +++    + D  T   LV           A  +  RM  +   PDL     V   
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224

Query: 662 LILEGKSEEADTLMLRFVERGHIQ 685
           L   G+ + A  L+ + +E+G I+
Sbjct: 225 LCKRGEPDLALNLLNK-MEKGKIE 247


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 241/492 (48%), Gaps = 28/492 (5%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
             R L  M  +G      A + L+  + + G+ +NA  ++ +++++    +    N  I+
Sbjct: 88  GSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLIN 147

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                 ++ +ALR L+   +A   PN  TY+ ++   CD  ++K A++++D      C P
Sbjct: 148 AYCKSGEIEEALRVLDHTSVA---PNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYP 204

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D V+   ++   CKE  + +                       A +L N+M   GC PDV
Sbjct: 205 DVVTCTVLIDATCKESGVGQ-----------------------AMKLFNEMRGKGCKPDV 241

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           VTY  ++ GFC+ G LD+A   L+++  +GC+ + +S+   L  LC  G+ ++A +++ T
Sbjct: 242 VTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLAT 301

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
              +   P+ +T++++++ L ++G L +A +V+  M K G  P     N LIQ  C    
Sbjct: 302 MLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKG 361

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +D A + ++  +++GC  ++V +  L+   C+ G +++A+ +L  +      P  ++Y T
Sbjct: 362 IDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNT 421

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE--KMLS 577
           +ID L K G+ E A EL+ +M  KGL P ++T  +V+    + G+V + +K     K   
Sbjct: 422 VIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFG 481

Query: 578 KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
            +     YN ++  LC       A   L  ++    K   ++   L++    +G+   A 
Sbjct: 482 IKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEAS 541

Query: 638 KVACRMFNRNLI 649
           K++  +++R L+
Sbjct: 542 KLSNELYSRGLV 553



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 228/476 (47%), Gaps = 11/476 (2%)

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
           L+   +L +  RFLE M   G  P+V+    LI+ +C + R K+A +++  +   G   D
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL---------FHDQGRIEEAKELVNQMS 331
             SY  ++   CK   I+E   +++      N            D+G++++A +++++  
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQL 198

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
           Q  C PDVVT T +++  C+   + QA K+  +M   GCKP+ V+Y   + G C  G+  
Sbjct: 199 QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLD 258

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           EA   +          + I++++++  L   G+  +A  ++  M++KG FP+ V  N+LI
Sbjct: 259 EAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILI 318

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LC++G +  A   ++     G   N  +F  LI+GFC +  ++ A+  L+ M      
Sbjct: 319 NFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCY 378

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD VTY  ++ AL K+G+V++A  ++ ++ SKG  P++++Y TVI    +VG+ E  ++L
Sbjct: 379 PDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVEL 438

Query: 572 LEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
           LE+M  K  +        V+  L   G + EA K    +     K +A   + ++     
Sbjct: 439 LEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCK 498

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ 685
                LA      M      P       + + +  EG +EEA  L      RG ++
Sbjct: 499 AQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVK 554



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 170/339 (50%), Gaps = 27/339 (7%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNA 195
           + D + Y ++++   K      A   L+ +   G  C+ +  S+ M+  S    G+  +A
Sbjct: 238 KPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYG--CQSDVISHNMILRSLCSGGRWMDA 295

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           M +L+ M +    P+++  N  I+ L     L KAL  LE M   G TPN  ++N LI+G
Sbjct: 296 MKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQG 355

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           +C+   I  AI+ ++ M  +GC PD V+Y  ++  LCK+                     
Sbjct: 356 FCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKD--------------------- 394

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G++++A  +++Q+S  GC P +++Y  V++G  +VG+ + A ++L++M + G KP+ +
Sbjct: 395 --GKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLI 452

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           + T+ + GL   GK  EA +  +  +     PNA  Y+ +M GL +  + S A D + +M
Sbjct: 453 TCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDM 512

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           V  G  PT      LI+ +  EG  + A K   E  ++G
Sbjct: 513 VANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRG 551


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 230/489 (47%), Gaps = 37/489 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I++  M+    + ++   A     LM  +G + + E  ++++   SR  ++ NA    + 
Sbjct: 157 ILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYAD 216

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  +  N+   N  I+VL    KL KA  FL  M+  GI P ++TYN L++GY    R
Sbjct: 217 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGR 276

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           I+ A  +I EM  KG  PD  +Y  ++ ++C E R                         
Sbjct: 277 IEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR------------------------- 311

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A E++ +M  +G +PD V+Y  ++ G    G+L+ A     +M   G  P   +Y   +
Sbjct: 312 -ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLI 370

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +GL    K   A  +I    E+    +++TY++V++G  + G   +A  +  EM+  G  
Sbjct: 371 HGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIK 430

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           PT      LI  LCR  K   A +  ++ + KG   ++V   +L+ G C  G+++ A SL
Sbjct: 431 PTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSL 490

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L +M     DPD VTY  ++  L   G+ EEA ELM +M  +G+ P  ++Y T+I  Y +
Sbjct: 491 LKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 550

Query: 562 VGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKA---- 615
            G  +    + ++MLS     T   YN +++ L       + G++  ++LR         
Sbjct: 551 KGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSK----NQDGELAEELLREMKSEGIVP 606

Query: 616 -DASTCHVL 623
            D+S C V+
Sbjct: 607 NDSSFCSVI 615



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 219/445 (49%), Gaps = 24/445 (5%)

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
           T + + ++ +++ YC L  + +AI+    M  KG  P   +   ++  L +  RI+    
Sbjct: 153 TKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWV 212

Query: 303 L---MEKMVNDSNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
               M +M   SN++           +G++++AK  +  M   G  P +VTY  +V G+ 
Sbjct: 213 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYS 272

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA-REMINTSEEEWWTPNA 409
             G ++ A+ ++ +M   G +P+  +Y   L+ +C+ G++ E  REM          P++
Sbjct: 273 LRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIG----LVPDS 328

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           ++Y++++ G    G L  A     EMVK+G  PT    N LI  L  E K++ A+  ++E
Sbjct: 329 VSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 388

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              KG  ++ V +  +I G+CQ GD ++A +L D+M      P   TYT++I  L +  +
Sbjct: 389 IREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNK 448

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQ 587
             EA EL  K++ KG+ P +V   T++  +C  G ++    LL++M  ++       YN 
Sbjct: 449 TREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNC 508

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           ++  LC  G  EEA +++G++ R   K D  + + L+  Y  KG    A+ V   M +  
Sbjct: 509 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLG 568

Query: 648 LIPDLKLCKKVSERLILEGKSEEAD 672
             P L     ++   +L+G S+  D
Sbjct: 569 FNPTL-----LTYNALLKGLSKNQD 588



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 167/369 (45%), Gaps = 6/369 (1%)

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++EA E    M + G  P   T   +++   R+  ++ A      MY    K N  ++  
Sbjct: 172 VDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 231

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +N LC  GK  +A+  +   E     P  +TY+ ++ G    G++  A  ++ EM  KG
Sbjct: 232 MINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKG 291

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           F P     N ++  +C EG+   A + ++E    G   + V++  LIRG    GDLE A 
Sbjct: 292 FQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAF 348

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
           +  D+M      P   TY T+I  L    ++E A  L+ ++  KG+V   VTY  VI+ Y
Sbjct: 349 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGY 408

Query: 560 CQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           CQ G  +    L ++M++   +  +  Y  +I  LC      EA ++  KV+    K D 
Sbjct: 409 CQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDL 468

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLR 677
              + L++ +   G    A+ +   M   N+ PD      +   L  EGK EEA  LM  
Sbjct: 469 VMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGE 528

Query: 678 FVERGHIQP 686
              RG I+P
Sbjct: 529 MKRRG-IKP 536



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 153/313 (48%), Gaps = 20/313 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  VLR M  +GI   P++ SY  L+   S  G L  A      M K  + P     NT 
Sbjct: 312 ASEVLREM--KGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTL 369

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           IH L + NK+  A   +  ++  GI  + +TYN +I GYC     K A  L DEM   G 
Sbjct: 370 IHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGI 429

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NLFHD----QGRIEEAKE 325
            P + +Y +++  LC+  + +E  +L EK+V           N   D     G ++ A  
Sbjct: 430 KPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFS 489

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+ +M +M   PD VTY  ++ G C  G+ ++A++++ +M   G KP+ +SY   ++G  
Sbjct: 490 LLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYS 549

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR--EGKLSEACDVVREMVKKGFFPT 443
             G +  A  + +      + P  +TY+ ++ GL +  +G+L+E  +++REM  +G  P 
Sbjct: 550 KKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAE--ELLREMKSEGIVPN 607

Query: 444 PVEINLLIQSLCR 456
                 +I+++ +
Sbjct: 608 DSSFCSVIEAMSK 620


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 149/543 (27%), Positives = 249/543 (45%), Gaps = 58/543 (10%)

Query: 109 RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA 168
           R +CA  R   D  V L   + + R+ +   D I Y  ++  L+K      A  +L  M 
Sbjct: 166 RSLCA--RGDLDRAVTL---FDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMP 220

Query: 169 RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVA-PNLLICNTAIHVLVVGNKL 227
           R G++     ++ L+    +AG+    M V   + K   A PNL   N  +  L    + 
Sbjct: 221 RSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRF 280

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
            +     ERM    + P+V+TY  LI G C    +  A ++  E+   G   D   Y ++
Sbjct: 281 KEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSL 340

Query: 288 MGYLCKEKRIKE------------VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQ-MG 334
           +   C+  R++E            +R+L    +    LF D G ++EA EL + + + + 
Sbjct: 341 VKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLF-DSGMVDEAIELWDLLEKDVA 399

Query: 335 CIPDVVT-----------------------------------YTAVVNGFCRVGELDQAK 359
           CIPD VT                                   Y++++NG C VG L  A 
Sbjct: 400 CIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAV 459

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           K+ ++M   GCKPN+  Y A ++G C   ++ +A  + +   +   +P  ITY+ ++ GL
Sbjct: 460 KVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGL 519

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            +  K  EA  V REMV+ GF P       LI+ L  + K+D A    ++ L KG  V+V
Sbjct: 520 CKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDV 579

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKK-DPDTVTYTTIIDALSKNGRVEEATELMM 538
           +    LI G C  G ++EAL +  DM   K   P+ VTY T++D L + G +++A  L  
Sbjct: 580 MMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWT 639

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFG 596
            +   GL P +++Y T I   C   R+ + ++LL+++LS+    T   +N ++  +  +G
Sbjct: 640 SITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699

Query: 597 YLE 599
            ++
Sbjct: 700 PIQ 702



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 143/574 (24%), Positives = 252/574 (43%), Gaps = 29/574 (5%)

Query: 136 RYRHDP----IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRA 189
           R RH P        ++L   S+  +   A    R +    + C P   S+  L+ A+ RA
Sbjct: 74  RLRHRPRFSESAALVVLSAFSRAIMPDAALDAFRALPSI-LGCNPGIRSHNALLDAFVRA 132

Query: 190 GKLRNAMYVLSMMQKAA----VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
            +  +A    + +   A    +APNL   N  +  L     L +A+   + ++   + P+
Sbjct: 133 RRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPD 192

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
            +TY+ L+ G     R+  A+ L+DEMP  G  PD V Y  ++G   K    ++V  + +
Sbjct: 193 CITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWD 252

Query: 306 KMVNDS---------NLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           K+V D          N+  D     GR +E  E+  +M      PDV+TY  +++G CR 
Sbjct: 253 KLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRS 312

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
           G++D A ++  ++   G   +   Y + + G C  G+  EA +  +++       N  TY
Sbjct: 313 GDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTY 371

Query: 413 SVVMHGLRREGKLSEACDVVREMVKK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           ++++ GL   G + EA ++   + K     P  V    LI  LC+ G  + A    +E  
Sbjct: 372 NIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEAR 431

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
             G  ++V +++S+I G C  G L +A+ + + M      P++  Y  +I    +  R  
Sbjct: 432 VSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTS 491

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVI 589
           +A  +  KM   G  PTV+TY T+I   C+  + ++   +  +M+        T Y  +I
Sbjct: 492 DAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLI 551

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF-NRNL 648
             L S   +++A  I  ++L    K D    ++L+    + G    A  V   M   +N 
Sbjct: 552 RGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNC 611

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            P+L     + + L   G  ++A TL     E G
Sbjct: 612 PPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG 645


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 239/511 (46%), Gaps = 33/511 (6%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           A S L+    + GK+  A+ ++  + +  V+PN+ + N  I  L  G    +A    +RM
Sbjct: 334 AVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRM 393

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G+ PN +TY+ LI  +C   ++  A+  + EM   G  P    Y +++   CK   I
Sbjct: 394 GKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDI 453

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                LM +M+N         ++E               P VVTYT+++ G+C  G++++
Sbjct: 454 SAAESLMAEMINK--------KLE---------------PTVVTYTSLMGGYCSKGKINK 490

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A ++  +M   G  P+  ++T  L+GL   G   +A ++     E    PN +TY+V++ 
Sbjct: 491 ALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIE 550

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G   EG +S+A + + EM++KG  P       LI  LC  G+   AK F+       C +
Sbjct: 551 GYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           N + +T L+ GFC++G LEEALS+  DM L   D D V Y  +ID   K+   +    L+
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLL 670

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCS 594
            +M  +GL P  V Y ++I    + G  ++   + + M++ + C      Y  VI  LC 
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN-EGCVPNEVTYTAVINGLCK 729

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN---RNLIPD 651
            G++ EA +IL   +R  +       +      L KG+  +  K A  + N   + L+ +
Sbjct: 730 AGFVNEA-EILCSKMRPGNSVPNQVTYGCFLDILTKGVGDM--KKAVELHNAILKGLLAN 786

Query: 652 LKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                 +      +G+ EEA  L+ R +  G
Sbjct: 787 TATYNMLIRGFCRQGRMEEASELITRMIGDG 817



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 152/602 (25%), Positives = 266/602 (44%), Gaps = 45/602 (7%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADE-RVALQFFYWADRQW 135
            V  V R++  + +W   L  EL +  R LK   +  +L    D+ ++ L+FF +     
Sbjct: 41  FVDSVRRIVRGKRSWEIALSSELVS--RRLKTIHVEEILIGTIDDPKLGLRFFNFLGLHR 98

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
            + H    + +++  L +  L   A  +L+ +  R ++   E F  L   Y +  KL ++
Sbjct: 99  GFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALK-PSEVFDALFSCYEKC-KLSSS 156

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
                ++Q               H +     L   L F   M    + P V T + L+ G
Sbjct: 157 SSFDLLIQ---------------HYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHG 201

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
                    A++L D+M   G  PD   Y  V+  LC      E++DL            
Sbjct: 202 LVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLC------ELKDL------------ 243

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
                  AKE++ QM   GC  ++V Y  +++G C+  ++ +A  + + +     KP+ V
Sbjct: 244 -----SRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVV 298

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y   + GLC   +     EMI+      ++P+    S ++ GLR+ GK+ EA ++V+ +
Sbjct: 299 TYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRV 358

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            + G  P     N LI SLC+    D A+         G   N V ++ LI  FC++G L
Sbjct: 359 AEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKL 418

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           + ALS L +M      P    Y ++I+   K G +  A  LM +M++K L PTVVTY ++
Sbjct: 419 DTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSL 478

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +  YC  G++   L+L  +M  K    + Y    ++  L   G + +A K+  ++     
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNV 538

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
           K +  T +V++E Y  +G    A++    M  + ++PD    + +   L L G++ EA  
Sbjct: 539 KPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598

Query: 674 LM 675
            +
Sbjct: 599 FV 600



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 203/432 (46%), Gaps = 14/432 (3%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
             A+ ++  M  + +E     ++ LM  Y   GK+  A+ +   M    + P++    T 
Sbjct: 454 SAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTL 513

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +  L     +  A++    M    + PN +TYN +I+GYC+   +  A + ++EM  KG 
Sbjct: 514 LSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGI 573

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------VND---SNLFHD---QGRIEEAKE 325
            PD  SY  ++  LC   +  E +  ++ +      +N+   + L H    +G++EEA  
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           +   M   G   D+V Y  +++G  +  +      +L++M+  G KP+ V YT+ ++   
Sbjct: 634 VCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKS 693

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   EA  + +    E   PN +TY+ V++GL + G ++EA  +  +M      P  V
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQV 753

Query: 446 EINLLIQSLCRE-GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
                +  L +  G M  A +     L KG   N   +  LIRGFC++G +EEA  L+  
Sbjct: 754 TYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITR 812

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      PD +TYTT+I  L +   V++A EL   M  KG+ P  V Y T+IH  C  G 
Sbjct: 813 MIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGE 872

Query: 565 VEDLLKLLEKML 576
           +    +L  +ML
Sbjct: 873 MGKATELRNEML 884



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 200/420 (47%), Gaps = 19/420 (4%)

Query: 152 SKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNL 211
           SK K+ + A R+   M  +GI      F+ L+    RAG +R+A+ + + M +  V PN 
Sbjct: 484 SKGKINK-ALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNR 542

Query: 212 LICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
           +  N  I        ++KA  FL  M   GI P+  +Y  LI G C   +  +A   +D 
Sbjct: 543 VTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------------VNDSNLFHDQ 317
           +    C  +++ Y  ++   C+E +++E   + + M              + D +L H  
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKD 662

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            ++     L+ +M   G  PD V YT++++   + G+  +A  +   M + GC PN V+Y
Sbjct: 663 RKVFLG--LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE-GKLSEACDVVREMV 436
           TA +NGLC  G   EA  + +        PN +TY   +  L +  G + +A ++    +
Sbjct: 721 TAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVEL-HNAI 779

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            KG        N+LI+  CR+G+M+ A + +   +  G + + + +T++I   C++ D++
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVK 839

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +A+ L + M      PD V Y T+I      G + +ATEL  +ML +GL P   T  T I
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 176/398 (44%), Gaps = 29/398 (7%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGK 191
           +W  + + + Y +M+E   +      A   L  M  +GI   P+ +SY  L+      G+
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGI--VPDTYSYRPLIHGLCLTGQ 592

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
              A   +  + K     N +     +H      KL +AL   + M L G+  +++ Y  
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGV 652

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI G       K  + L+ EM  +G  PD V Y +++    K    KE   + + M+N+ 
Sbjct: 653 LIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE- 711

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                                 GC+P+ VTYTAV+NG C+ G +++A+ +  +M      
Sbjct: 712 ----------------------GCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSV 749

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN V+Y  FL+ L      ++    ++ +  +    N  TY++++ G  R+G++ EA ++
Sbjct: 750 PNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASEL 809

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           +  M+  G  P  +    +I  LCR   +  A +       KG   + V + +LI G C 
Sbjct: 810 ITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCV 869

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTII--DALSKN 527
            G++ +A  L ++M      P+T T  T I  D+ SK+
Sbjct: 870 AGEMGKATELRNEMLRQGLKPNTETSETTISNDSSSKS 907


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 222/459 (48%), Gaps = 19/459 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRL---MARRGIECRPEAFSYLMV--AYSRAGK 191
           + H P   +   ++L+     +    VL L   M   GI   P+ ++  +V  ++    +
Sbjct: 49  HMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIP--PDVYTLTIVINSFCHLNR 106

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +  A+ VL+ + K    P+     T +  L V  K+ +AL   ++M   G  PNV+TY  
Sbjct: 107 VDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGT 166

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           L+ G C   ++ +A+ L  EM  KG SPD  +Y +++  LC     K V  L+ +MV   
Sbjct: 167 LMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSK 226

Query: 312 --------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                   N+  D    +G++ EA ++V+ M Q G  PDVVTY A+++G C   E+D+A 
Sbjct: 227 IMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAV 286

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           K+   M  +GC  N VSY   +NG C   +  +A  +      +   PN +TYS ++HGL
Sbjct: 287 KVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGL 346

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
              G+L +A  +  EMV  G  P  V  ++L+  LC+  ++  A   ++         +V
Sbjct: 347 CHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDV 406

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
             +   I G C+ GDLE A  L  ++      PD  T+  +I  L K G ++EA++L  +
Sbjct: 407 QVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFRE 466

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           M   G +    TY T+     Q  +    ++LLE+ML++
Sbjct: 467 MDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLAR 505



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/509 (25%), Positives = 232/509 (45%), Gaps = 29/509 (5%)

Query: 176 PEAFSYLMVAYSRAGKLRNAMYVLSM---MQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           P  F +  +  S A K+++   VLS+   M    + P++      I+     N++  AL 
Sbjct: 54  PPIFEFAKLLTSIA-KMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALS 112

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
            L ++   G  P+  T+  L++G C + +I +A+ + D+M  +G  P+ V+Y T+M  LC
Sbjct: 113 VLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLC 172

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           K++++ E  +L  +M+              AK         G  PD+ TY ++++  C +
Sbjct: 173 KDRQLTEALNLFSEMI--------------AK---------GISPDIFTYNSLIHALCNL 209

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
            E      +L +M      PN VS    ++ LC  GK  EA ++++   +    P+ +TY
Sbjct: 210 CEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTY 269

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           + +M G     ++ EA  V   MV+ G     V  N LI   C+  ++D A    +E   
Sbjct: 270 AALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCR 329

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           +    N + +++LI G C  G L++A++L ++M  C + P+ VTY+ ++D L KN R+ E
Sbjct: 330 QELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAE 389

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIE 590
           A  L+  +    L P V  Y   I   C+ G +E    L   +  +  Q     +N +I 
Sbjct: 390 AMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIR 449

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC  G L+EA K+  ++       +  T + + +  L       A ++   M  R    
Sbjct: 450 GLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSA 509

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFV 679
           D+     + + L  +G  +    ++  F+
Sbjct: 510 DVSTTALLVKMLSDDGLDQSVKQILCEFM 538



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 225/459 (49%), Gaps = 29/459 (6%)

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           +  L   ++M   GI P+V T   +I  +C L+R+  A+ ++ ++   G  PD  ++ T+
Sbjct: 73  STVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTL 132

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +  LC   +I E  D+ +KMV +                       G  P+VVTY  ++N
Sbjct: 133 VRGLCVVGKIGEALDVFDKMVGE-----------------------GFQPNVVTYGTLMN 169

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G C+  +L +A  +  +M   G  P+  +Y + ++ LC+  +      ++N   +    P
Sbjct: 170 GLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMP 229

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           N ++ ++V+  L +EGK++EA DVV  M++ G  P  V    L+   C   +MD A K  
Sbjct: 230 NVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVF 289

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALS 525
              +  GC  NVV++ +LI G+C+   +++A+ L ++M  C+++  P+T+TY+T+I  L 
Sbjct: 290 DMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEM--CRQELIPNTMTYSTLIHGLC 347

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRT 583
             GR+++A  L  +M++ G +P +VTY  ++   C+  R+ + + LL+ +          
Sbjct: 348 HVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQ 407

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            YN  I+ +C  G LE A  +   +     + D  T ++++     +G+   A K+   M
Sbjct: 408 VYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREM 467

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                + +      +++ L+   K+  A  L+   + RG
Sbjct: 468 DENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARG 506



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 183/370 (49%), Gaps = 5/370 (1%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L  +M   G  PDV T T V+N FC +  +D A  +L ++   G +P+T ++T  + GL
Sbjct: 77  SLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGL 136

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  GK  EA ++ +    E + PN +TY  +M+GL ++ +L+EA ++  EM+ KG  P  
Sbjct: 137 CVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDI 196

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
              N LI +LC   +       + E +      NVV+   ++   C++G + EA  ++D 
Sbjct: 197 FTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDM 256

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M     +PD VTY  ++D       ++EA ++   M+  G V  VV+Y T+I+ YC++ R
Sbjct: 257 MIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQR 316

Query: 565 VEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           ++  + L E+M  ++       Y+ +I  LC  G L++A  +  +++      +  T  +
Sbjct: 317 IDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSI 376

Query: 623 LVESYLNKGIPLL-AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
           L++ YL K   L  A  +   +   NL PD+++     + +   G  E A  L      R
Sbjct: 377 LLD-YLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPR 435

Query: 682 GHIQPKSEEH 691
           G +QP    H
Sbjct: 436 G-LQPDVWTH 444



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 198/448 (44%), Gaps = 53/448 (11%)

Query: 141 PIVYYMMLEILSKTKL--CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           P VY + + I S   L     A  VL  + + G +     F+ L+      GK+  A+ V
Sbjct: 89  PDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDV 148

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
              M      PN++   T ++ L    +L +AL     M   GI+P++ TYN LI   C+
Sbjct: 149 FDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCN 208

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN--------- 309
           L   K    L++EM      P+ VS   V+  LCKE ++ E  D+++ M+          
Sbjct: 209 LCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVT 268

Query: 310 -----DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                D +    +  ++EA ++ + M + GC+ +VV+Y  ++NG+C++  +D+A  + ++
Sbjct: 269 YAALMDGHCLRSE--MDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEE 326

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH------- 417
           M      PNT++Y+  ++GLCH G+  +A  + N        PN +TYS+++        
Sbjct: 327 MCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHR 386

Query: 418 ----------------------------GLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
                                       G+ R G L  A D+   +  +G  P     N+
Sbjct: 387 LAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNI 446

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           +I+ LC+ G +D A K  +E    GC  N   + ++ +G  Q      A+ LL++M    
Sbjct: 447 MIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARG 506

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELM 537
              D  T   ++  LS +G  +   +++
Sbjct: 507 FSADVSTTALLVKMLSDDGLDQSVKQIL 534



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 2/160 (1%)

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           L++ALS    M      P    +  ++ +++K         L  KM S G+ P V T   
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 555 VIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           VI+ +C + RV+  L +L K+  L  Q     +  ++  LC  G + EA  +  K++   
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
            + +  T   L+           A  +   M  + + PD+
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDI 196


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 228/480 (47%), Gaps = 14/480 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A++V   M R G+     +F  L+V   R GK+     +L+ M +   + +   C   + 
Sbjct: 165 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 224

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    +      F  RM   G  PNV+ Y   I G C    +K A  +++EM  +G  P
Sbjct: 225 SLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 284

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-------------FHDQGRIEEAKEL 326
           +  ++ T++  LCK    +    L  K++  S+              +  +G++  A+ L
Sbjct: 285 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 344

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           + +M + G  P+  TYT ++ G C+ G  D+A +++ +M   G  PN  +Y A ++G C 
Sbjct: 345 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 404

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            GK  EA +++  +  +    + ITY++++    ++G ++ A D+   MV+ G  P    
Sbjct: 405 KGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEA 464

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
              LI + C++ +M+ ++KF  +CL  G       +TS+I G+C+ G    AL + + M 
Sbjct: 465 YTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMV 524

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                 D++TY  +I  L K  R+EEA  L   ML K LVP  VT  T+   YC+  +  
Sbjct: 525 QNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTS 584

Query: 567 DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
             + +L+++  +Q+  T  + V+  L + G ++ A   L KVL      D +T    + S
Sbjct: 585 IAVSVLDRLDKRQQVHTV-DVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINS 643



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 216/452 (47%), Gaps = 17/452 (3%)

Query: 166 LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
            +AR  +    E    ++ A+  AG+L  A  ++  M+   +   +   N  + V +   
Sbjct: 101 FVARGSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETG 160

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
               A +  + M  AG+ P+  ++  L+   C   ++++   L+  M   G S D  +  
Sbjct: 161 SFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCT 220

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDS---NLFHDQGRIE---------EAKELVNQMSQM 333
            V+  LC++ R K+V +   +M+      N+ +    I+         +A  ++ +M   
Sbjct: 221 VVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGR 280

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKM-LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           G  P+V T+T +++G C++G  ++A ++ L+ +     KPN  +YT  + G C  GK   
Sbjct: 281 GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLAR 340

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A  ++    E+   PN  TY+ ++ G  + G    A +++ +M ++GF P     N +I 
Sbjct: 341 AEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 400

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
             C++GK+  A K ++   ++G   + + +T LI   C++G +  AL L D M      P
Sbjct: 401 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP 460

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D   YT++I    +  ++EE+ +   K L  GL+PT  TY ++I  YC+VGR    L++ 
Sbjct: 461 DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVF 520

Query: 573 EKMLSKQKC---RTAYNQVIENLCSFGYLEEA 601
           E+M+ +  C      Y  +I  LC    LEEA
Sbjct: 521 ERMV-QNGCFADSITYGALISGLCKESRLEEA 551



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 162/375 (43%), Gaps = 10/375 (2%)

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           Y T          +    ++M  MV     F + GR+ EA ++V +M   G    V T  
Sbjct: 94  YVTAATAFVARGSLPMAHEVMRGMVA---AFGEAGRLPEAADMVLEMRSHGLPLCVETAN 150

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            V+      G    A+K+   M   G  P+  S+ A +   C  GK  E   ++      
Sbjct: 151 WVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRY 210

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
            ++ +  T +VV+  L  +G+  +  +  R M++ G  P  V     I  LC+   +  A
Sbjct: 211 GFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQA 270

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD---PDTVTYTTI 520
              ++E + +G   NV   T+LI G C+ G  E A  L   + L K     P+  TYT +
Sbjct: 271 FHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLF--LKLIKSSSYKPNVHTYTVM 328

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           I    + G++  A  L+++M+ +GL P   TY T+I  +C+ G  +   +L+ KM  +  
Sbjct: 329 IGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGF 388

Query: 581 CRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
                 YN VI+  C  G ++EA K+L        K D  T  +L+  +  +G    A  
Sbjct: 389 LPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALD 448

Query: 639 VACRMFNRNLIPDLK 653
           +  RM      PD++
Sbjct: 449 LFDRMVENGCCPDIE 463



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/367 (21%), Positives = 166/367 (45%), Gaps = 36/367 (9%)

Query: 130 WADRQWR----------YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF 179
           W +R +R          Y+ +   Y +M+    +      A+ +L  M  +G++     +
Sbjct: 301 WTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTY 360

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
           + L+  + + G    A  +++ M++    PN+   N  I       K+ +A + L     
Sbjct: 361 TTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 420

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
            G+  + +TY  LI  +C    I  A+ L D M   GC PD  +Y +++   C+++    
Sbjct: 421 QGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQR---- 476

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                              ++EE+++  ++   +G +P   TYT+++ G+C+VG    A 
Sbjct: 477 -------------------QMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLAL 517

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++ ++M  +GC  ++++Y A ++GLC   +  EA+ +     ++   P  +T   +    
Sbjct: 518 RVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEY 577

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            R  K S A  V+  + K+    T   ++++++ L   G +D A  F+++ L++  AV+ 
Sbjct: 578 CRREKTSIAVSVLDRLDKRQQVHT---VDVVVRKLSALGDVDAASLFLKKVLDEDYAVDH 634

Query: 480 VNFTSLI 486
             +T  I
Sbjct: 635 ATYTGFI 641



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 145/376 (38%), Gaps = 53/376 (14%)

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
           ++R LM   V  +  F  +G +  A E++  M               V  F   G L +A
Sbjct: 86  DLRRLMRLYVTAATAFVARGSLPMAHEVMRGM---------------VAAFGEAGRLPEA 130

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             M+ +M  HG              LC               E   W        V+  G
Sbjct: 131 ADMVLEMRSHGLP------------LC--------------VETANW--------VLRVG 156

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L   G    A  V   M + G  P       L+   CREGK++     +      G +++
Sbjct: 157 LE-TGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLD 215

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
               T ++R  C+KG  ++       M      P+ V YT  ID L K   V++A  ++ 
Sbjct: 216 NATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLE 275

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSF 595
           +M+ +GL P V T+ T+I   C++G  E   +L  K++     +     Y  +I   C  
Sbjct: 276 EMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCRE 335

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
           G L  A  +L +++    K + +T   L+  +   G    A+++  +M     +P++   
Sbjct: 336 GKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTY 395

Query: 656 KKVSERLILEGKSEEA 671
             V +    +GK +EA
Sbjct: 396 NAVIDGFCKKGKIQEA 411



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 9/263 (3%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  +++   K    Q A +VLR+   +G++     ++ L+  + + G +  A+ +   M
Sbjct: 394 TYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRM 453

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            +    P++    + I       ++ ++ +F ++  + G+ P   TY  +I GYC + R 
Sbjct: 454 VENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRS 513

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNL 313
             A+++ + M   GC  D ++Y  ++  LCKE R++E + L E M         V    L
Sbjct: 514 TLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTL 573

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
             +  R E+    V+ + ++     V T   VV     +G++D A   L+++       +
Sbjct: 574 TFEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVD 633

Query: 374 TVSYTAFLNGLCHNGKSLEAREM 396
             +YT F+N    N +   A EM
Sbjct: 634 HATYTGFINSCYENNRYALASEM 656


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 235/507 (46%), Gaps = 44/507 (8%)

Query: 161 KRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
           KR+L +M   G       F+ L+ AY ++     A  +L  M+K    P  ++ N  I  
Sbjct: 363 KRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGS 422

Query: 221 LVVGNKLAKALRF------LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           +  G +L   + F         M  AG   N +      +  C   + + A K+I EM  
Sbjct: 423 ICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMG 482

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEE 322
            G  PD  +Y  V+G+LC   R++    L ++M                + F   G I++
Sbjct: 483 NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQ 542

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A   +++M + GC P VVTYT +++ + +  ++  A ++ + M   GC PN ++YTA ++
Sbjct: 543 AHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALID 602

Query: 383 GLCHNGKSLEAREMI--------------------NTSEEEWWTPNAITYSVVMHGLRRE 422
           G C +G   +A ++                     N +E+    PN +TY  ++ GL + 
Sbjct: 603 GYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK----PNVVTYGALVDGLCKA 658

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            K+ +A D++  M   G  P  +  + LI   C+  K+D A++   + +  G   NV  +
Sbjct: 659 HKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTY 718

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           +SLI    +   L+  L +L  M      P+ V YT +ID LSK  + +EA +LM+ M  
Sbjct: 719 SSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEE 778

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
           KG  P VVTY  +I  + + G+V+  L+L  +M SK        Y  +I + C+ G+L+E
Sbjct: 779 KGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDE 838

Query: 601 AGKILGKVLRTASKADASTCHVLVESY 627
           A  +L ++ +T      S+   ++E Y
Sbjct: 839 AYALLEEMKQTYWPKHVSSYCKVIEGY 865



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 225/479 (46%), Gaps = 41/479 (8%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           + A +V+  M   G       +S ++     A ++ NA ++   M+   V P++      
Sbjct: 471 EKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTIL 530

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I        + +A  +L+ M   G  P V+TY  LI  Y    ++  A +L + M  KGC
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
            P+ ++Y  ++   CK   I++   +  +M  D+    D   ++   ++ N +++    P
Sbjct: 591 FPNVITYTALIDGYCKSGNIEKACQIYARMRGDA----DIPDVDMYFKIKNNVAEK---P 643

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           +VVTY A+V+G C+  ++  A+ +L+ M+  GC+PNT+ Y A ++G C   K  EA+E+ 
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +   E  + PN  TYS ++  L ++ +L     V+ +M++    P  V    +I  L + 
Sbjct: 704 HKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKV 763

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
            K D A K M     KGC  NVV +T++I GF + G +++ L L  +M      P+ VTY
Sbjct: 764 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 823

Query: 518 TTIIDALSKNGRVEEATELMMKM------------------------LSKGLV------- 546
           T +I+     G ++EA  L+ +M                        LS GL+       
Sbjct: 824 TVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNG 883

Query: 547 --PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLC-SFGYLEEAG 602
             P ++ Y+ +I  + + GR+E  L+L ++++S      A   +  +L  SF Y  + G
Sbjct: 884 SAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIG 942



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 144/655 (21%), Positives = 269/655 (41%), Gaps = 74/655 (11%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           LR   + L P  +  +L       + ++FF WA RQ  Y H P VY  +L++  +    +
Sbjct: 129 LRQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDR 188

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
             +  LR +     E   +  + L+    R G    A+  L  ++     P  +  N  +
Sbjct: 189 VPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALV 248

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
            V +  +KL  A      M   G++ +  T     +  C + + ++A+ LI++   +   
Sbjct: 249 QVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFV 305

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG------------RIEEAKEL 326
           P+ + Y  ++  LC+    +E  D + +M + S + + Q             ++   K +
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRI 365

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           ++ M   GC P    + ++V+ +C+  +   A K+L++M    CKP  V Y   +  +C 
Sbjct: 366 LSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICS 425

Query: 387 NGK--SLEAREMINTSEEEWWTPNAITYSVVMHGLRR----EGKLSEACDVVREMVKKGF 440
            G+       E+   +  E  +   +   V +    R     GK  +A  V+ EM+  GF
Sbjct: 426 GGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGF 485

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P     + +I  LC   +++ A    +E    G   +V  +T LI  F + G +++A +
Sbjct: 486 VPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHN 545

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
            LD+M     +P  VTYTT+I A  K  +V  A EL   M++KG  P V+TY  +I  YC
Sbjct: 546 WLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYC 605

Query: 561 QVGRVEDLLKLLEKM------------------LSKQKCRTAYNQVIENLCSF------- 595
           + G +E   ++  +M                  ++++     Y  +++ LC         
Sbjct: 606 KSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 596 -----------------------GY-----LEEAGKILGKVLRTASKADASTCHVLVESY 627
                                  G+     L+EA ++  K++      +  T   L++  
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRL 725

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                  L  KV  +M   +  P++ +  ++ + L    K++EA  LML   E+G
Sbjct: 726 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 226/478 (47%), Gaps = 56/478 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++  SK  + + A   L  M R G E     ++ L+ AY +A K+  A  + 
Sbjct: 523 DVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELF 582

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL-AGIT--------------- 243
            +M      PN++     I        + KA +   RM+  A I                
Sbjct: 583 ELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK 642

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           PNV+TY  L+ G C  H++KDA  L++ M + GC P+ + Y  ++   CK  ++ E +++
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702

Query: 304 MEKMVNDS-------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
             KMV                 LF D+ R++   +++++M +  C P++V YT +++G  
Sbjct: 703 FHKMVEHGYNPNVYTYSSLIDRLFKDK-RLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +V + D+A K++  M   GCKPN V+YTA ++G    GK  +  E+      +   PN +
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK----- 465
           TY+V+++     G L EA  ++ EM K+ ++P  V       S C+   ++G K+     
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEM-KQTYWPKHV------SSYCK--VIEGYKREFILS 872

Query: 466 --FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY------LCKKDPDTVTY 517
              ++E    G A  ++ +  LI  F + G LE AL L  ++         KK+     Y
Sbjct: 873 LGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKN----LY 928

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           T++I + S   ++  A EL   M+  G++P + T+  ++    +V R E+ L+L + +
Sbjct: 929 TSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/432 (23%), Positives = 178/432 (41%), Gaps = 63/432 (14%)

Query: 107 KPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRL 166
           K  QI A +R  AD    +  ++        + + + Y  +++ L K    + A+ +L  
Sbjct: 612 KACQIYARMRGDADIP-DVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLET 670

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   G E     +  L+  + +A KL  A  V   M +    PN+   ++ I  L    +
Sbjct: 671 MFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKR 730

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L   L+ L +M      PN++ Y  +I G   + +  +A KL+  M  KGC P+ V+Y  
Sbjct: 731 LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTA 790

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++                       + F   G++++  EL  +M   GC P+ VTYT ++
Sbjct: 791 MI-----------------------DGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 827

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           N  C  G LD+A  +L++M                                   ++ +W 
Sbjct: 828 NHCCATGHLDEAYALLEEM-----------------------------------KQTYWP 852

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            +  +Y  V+ G +RE  LS    ++ E+ K G  P  +   +LI +  + G+++ A + 
Sbjct: 853 KHVSSYCKVIEGYKREFILSLG--LLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALEL 910

Query: 467 MQECLNKGCAVNVVN--FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
            +E ++   ++      +TSLI  F     +  A  L  DM      PD  T+  ++  L
Sbjct: 911 HKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGL 970

Query: 525 SKNGRVEEATEL 536
            +  R EEA +L
Sbjct: 971 IRVRRWEEALQL 982


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 237/466 (50%), Gaps = 32/466 (6%)

Query: 151 LSKTKLCQGAKRVLRL-MARR---GIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQK 204
           ++ + L  G  RV RL  ARR   G+   P A++Y  LM A    G++R+A+ +L  M  
Sbjct: 121 VTYSALADGYCRVGRLDEARRVVDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLY 180

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
              AP+++  N  +     G    +A+  ++ M++ G TP  +TYN ++ G C    +  
Sbjct: 181 RGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDY 240

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAK 324
           A +L++ +P  GC+P+ V+Y TV+  L                          GR E+ +
Sbjct: 241 ARELLNSLPSYGCTPNTVNYNTVLKGL-----------------------RTAGRWEDVE 277

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           EL+ +M    C P   T + V++  C+ G   +A ++L++M  H C  N V+Y A ++GL
Sbjct: 278 ELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGL 337

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  G    A  +++  + +   PN  TY++++ GL    +  +A D++ +M +    P  
Sbjct: 338 CEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDI 397

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           +  N +I  LC++G    A +  ++   KGC  N V ++S+I G  + G +E++L LL++
Sbjct: 398 LTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNE 457

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M     +P+ + Y  + + L++  ++ EA +++ K+   G+ P  V Y T++   C+ G+
Sbjct: 458 MGSKGFNPE-INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGK 516

Query: 565 VEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
            +  + +L  M+S       + Y+ +I+ L   GY++EA ++L  +
Sbjct: 517 TDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTL 562



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 237/493 (48%), Gaps = 32/493 (6%)

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            L +++ +   P++ + N  +  L    + A A R +E     G     +TY+ L  GYC
Sbjct: 75  ALRVVESSLCPPDVALANRLVRDLCRRGRPADAARVVEA---CGSAATAVTYSALADGYC 131

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
            + R+ +A +++D MP+    P   +Y  +M  LC                        +
Sbjct: 132 RVGRLDEARRVVDGMPVL---PSAYAYNPLMHALCV-----------------------R 165

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G++ +A  L++ M   GC PDVVTY  ++   C+     QA +++  M   GC P  V+Y
Sbjct: 166 GQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTY 225

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              ++G+C  G    ARE++N+      TPN + Y+ V+ GLR  G+  +  +++ EM  
Sbjct: 226 NVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFS 285

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +   P+   ++++I SLC+EG    A + +++     C  N+V + +++ G C++G ++ 
Sbjct: 286 ENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDG 345

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           AL LL +M      P+  TY  ++  L    R E+A +LM KM     +P ++T+ T+I 
Sbjct: 346 ALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIG 405

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
             CQ G     +++ ++M  K  C  +  Y+ VIE L   G +E++ ++L ++       
Sbjct: 406 FLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNP 465

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           + +  H+L E    +   + A ++  ++ +  + P   L   +   L   GK+++A  ++
Sbjct: 466 EINY-HLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDIL 524

Query: 676 LRFVERGHIQPKS 688
              V  G +  +S
Sbjct: 525 SNMVSDGCMPDES 537



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 189/402 (47%), Gaps = 26/402 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y ++LE   K +  + A  ++ LM   G  C P   +Y  +M    R G +  A  
Sbjct: 186 DVVTYNILLEAACKGRGYRQAMELIDLMRVEG--CTPTNVTYNVIMDGMCREGDVDYARE 243

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L+ +      PN +  NT +  L    +       +  M      P+  T + +I   C
Sbjct: 244 LLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLC 303

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLF 314
                + AI+L+++M    C+ + V+Y  V+  LC++  +     L+  M  D    N+F
Sbjct: 304 QEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIF 363

Query: 315 H---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                     +  R E+A++L+ +MSQ  C+PD++T+  ++   C+ G   QA ++ +QM
Sbjct: 364 TYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQM 423

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              GC PN+V+Y++ + GL   GK  ++ E++N    + + P  I Y ++   L  E KL
Sbjct: 424 PEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE-INYHLLAECLNEEDKL 482

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA  +V ++   G  P  V  N ++  LCR GK D A   +   ++ GC  +   ++ L
Sbjct: 483 VEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSIL 542

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
           I+G   +G ++EA  LL    L  +D        I+D L KN
Sbjct: 543 IQGLAHEGYMKEARELLST--LSSRD-------VIVDNLIKN 575


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 234/458 (51%), Gaps = 14/458 (3%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           +R    RH P  I +  +L+  +K K    A  +   +  +GI+      + L+  +   
Sbjct: 48  NRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHM 107

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G++     VL+ + K    P+ +  NT I  L +  ++ KAL F +++   G   N ++Y
Sbjct: 108 GQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY 167

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-- 307
             LI G C +   + AIKL+ ++  +   P+   Y T++  LCK + + E   L  +M  
Sbjct: 168 ATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTV 227

Query: 308 -------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                  V  S L +    +G+++EA  L+N+M      P+V TY  +V+  C+ G++ +
Sbjct: 228 KGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           AK +L  M     KP+ ++Y+  ++G     +  +A+ + N       TP+  TY+++++
Sbjct: 288 AKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN 347

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  +   + EA ++ +EM +K   P  V  + LI  LC+ G++      + E  ++G   
Sbjct: 348 GFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPA 407

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +V+ ++SLI G C+ G L+ A++L + M   +  P+  T+T ++D L K GR+++A E+ 
Sbjct: 408 DVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVF 467

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
             +L+KG    V TY  +I+ +C+ G +E+ L +L KM
Sbjct: 468 QDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKM 505



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 213/412 (51%), Gaps = 27/412 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           ++ + + Y  ++  + K    +GA ++LR +  R  +   E +S ++ A  +   +  A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            + S M    ++ +++  +T I+   +  KL +A+  L  M L  I PNV TYN L+   
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 257 CDLHRIKDAIKLIDEMPLKGC-SPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLF 314
           C   ++K+A  ++  M LK C  PD ++Y T+M GY      + EV+             
Sbjct: 280 CKEGKVKEAKSVLAVM-LKACVKPDVITYSTLMDGYFL----VYEVK------------- 321

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
                  +A+ + N MS MG  PDV TYT ++NGFC+   +D+A  + ++M+     P  
Sbjct: 322 -------KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y++ ++GLC +G+     ++I+   +     + ITYS ++ GL + G L  A  +  +
Sbjct: 375 VTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNK 434

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M  +   P      +L+  LC+ G++  A++  Q+ L KG  +NV  +  +I G C++G 
Sbjct: 435 MKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGL 494

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           LEEAL++L  M      P+  T+ TII AL K    ++A +L+ +M+++GL+
Sbjct: 495 LEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 205/416 (49%), Gaps = 14/416 (3%)

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A+    RM     TP ++ +N ++  +  +     A+ L   + LKG  PD ++   ++ 
Sbjct: 43  AVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILIN 102

Query: 290 YLCKEKRIKEVRDLMEKMVN-----DSNLFHD-------QGRIEEAKELVNQMSQMGCIP 337
             C   +I     ++ K++      D+   +        +G++++A    +++   G   
Sbjct: 103 CFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL 162

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           + V+Y  ++NG C++G+   A K+L+++     KPN   Y+  ++ LC      EA  + 
Sbjct: 163 NQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLF 222

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +    +  + + +TYS +++G   EGKL EA  ++ EMV K   P     N+L+ +LC+E
Sbjct: 223 SEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           GK+  AK  +   L      +V+ +++L+ G+    ++++A  + + M L    PD  TY
Sbjct: 283 GKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           T +I+   KN  V+EA  L  +M  K +VP +VTY ++I   C+ GR+  +  L+++M  
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRD 402

Query: 578 KQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           + +      Y+ +I+ LC  G+L+ A  +  K+     + +  T  +L++     G
Sbjct: 403 RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGG 458



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/379 (20%), Positives = 173/379 (45%), Gaps = 8/379 (2%)

Query: 314 FHDQG-RIEEAKELVNQMSQMGCI---PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           FH Q   I+   + V+Q ++M C+   P ++ +  +++ F ++     A  +  ++   G
Sbjct: 30  FHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKG 89

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            +P+ ++    +N  CH G+      ++    +  + P+ +T + ++ GL  +G++ +A 
Sbjct: 90  IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKAL 149

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
               +++ +GF    V    LI  +C+ G   GA K +++   +    NV  ++++I   
Sbjct: 150 HFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 209

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+   + EA  L  +M +     D VTY+T+I      G+++EA  L+ +M+ K + P V
Sbjct: 210 CKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNV 269

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
            TY  ++   C+ G+V++   +L  ML    +     Y+ +++       +++A  +   
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +       D  T  +L+  +    +   A  +   M  +N++P +     + + L   G+
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 668 SEEADTLMLRFVERGHIQP 686
                 L+    +RG  QP
Sbjct: 390 IPYVWDLIDEMRDRG--QP 406


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 241/503 (47%), Gaps = 47/503 (9%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G+L  A+ ++   ++    P+   C   I  L    + A+A R L     A   P+V+
Sbjct: 79  RRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVL-----AACGPDVM 129

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            YN ++ GYC   ++  A +   E   +    D  +  T++  LC               
Sbjct: 130 AYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCG-------------- 172

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +GR   A  ++++M +  C+PDVVTYT ++   C+     QA K+L +M  
Sbjct: 173 ---------RGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 223

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+ V+Y   +NG+C  G+  +A E +         PN ++Y++V+ GL    +  +
Sbjct: 224 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 283

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A +++ EM +KG  P  V  N+LI  LCR+G ++ A + +++    GC+ N +++  L+ 
Sbjct: 284 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLH 343

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            FC++  +++A++ LD M      PD V+Y T++ AL ++G V+ A EL+ ++  KG  P
Sbjct: 344 AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP 403

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
            +++Y TVI    + G+ ++ L+LL +M+SK  Q     Y+ +   LC    +E+A +  
Sbjct: 404 VLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF 463

Query: 606 GKVLRTASKADASTCHVLVESYLNK-----GIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           GKV     + +    + ++     +      I L AY     M     +P+      + E
Sbjct: 464 GKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY-----MIGNGCMPNESTYTILIE 518

Query: 661 RLILEGKSEEADTLMLRFVERGH 683
            L  EG  +EA  L+     RG 
Sbjct: 519 GLAYEGLIKEARDLLDELCSRGE 541



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 201/392 (51%), Gaps = 12/392 (3%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           R  A R +E        L+      G+  NA+ VL  M +    P+++     +      
Sbjct: 149 RWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKR 208

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           +   +A++ L+ M+  G TP+++TYN ++ G C   R+ DAI+ +  +P  GC P+ VSY
Sbjct: 209 SGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSY 268

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
             V+  LC  +R ++  +LM +M                +    +G +E A E++ Q+ +
Sbjct: 269 NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 328

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            GC P+ ++Y  +++ FC+  ++D+A   L  M   GC P+ VSY   L  LC +G+   
Sbjct: 329 YGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 388

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A E+++  +++   P  I+Y+ V+ GL + GK  EA +++ EMV KG  P  +  + +  
Sbjct: 389 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 448

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LCRE +++ A +   +  + G   N V + ++I G C++ +   A+ L   M      P
Sbjct: 449 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 508

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +  TYT +I+ L+  G ++EA +L+ ++ S+G
Sbjct: 509 NESTYTILIEGLAYEGLIKEARDLLDELCSRG 540



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 23/298 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y ++L+ L   +  + A+ ++  M ++G       F+ L+    R G +  A+ VL  
Sbjct: 266 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 325

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           + K   +PN L  N  +H      K+ KA+ FL+ M   G  P++++YN L+   C    
Sbjct: 326 IPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 385

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +  A++L+ ++  KGC+P  +SY TV+  L K                        G+ +
Sbjct: 386 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTK-----------------------AGKTK 422

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA EL+N+M   G  PD++TY+ +  G CR   ++ A +   ++   G +PNTV Y A +
Sbjct: 423 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 482

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            GLC   ++  A ++          PN  TY++++ GL  EG + EA D++ E+  +G
Sbjct: 483 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 148/603 (24%), Positives = 277/603 (45%), Gaps = 54/603 (8%)

Query: 102 LLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAK 161
           L + L  RQ+  +L+++   + AL  F  A RQ  Y H P ++ ++L  LS  KL     
Sbjct: 4   LPKPLSARQLFKLLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVT 63

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA-AVAPNLLICNTAIHV 220
           R++ L+  +  +C  +    ++ AY+++     A+     M++     P +   N  ++ 
Sbjct: 64  RIVELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNA 123

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
            +  N L KA  FL   +  GI PN+ TYN LIK      +  +A  L+D M  K   PD
Sbjct: 124 FIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPD 183

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVN 328
             SY TV+  + K   +    ++ ++M                + F  +G   + KE+  
Sbjct: 184 VYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWE 243

Query: 329 QMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           ++ +  C+ P+VVTY  ++NG C++G  D++ +M ++M  + C+ +  +Y++ + GLC  
Sbjct: 244 RLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDV 303

Query: 388 GKSLEA----REMINTSEE-----------------------EWWT-------PNAITYS 413
           G    A    +EM+  S                         E W         N ++Y+
Sbjct: 304 GNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYN 363

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           + + GL    K+ EA  V   + ++G         +LI  LC+ G ++ A K ++E  + 
Sbjct: 364 IFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDG 423

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM--YLCKKDPDTVTYTTIIDALSKNGRVE 531
           G  ++   ++S++ G  ++G ++EAL ++  M  Y C+  P       +I+   +  ++E
Sbjct: 424 GDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVC--NPLINGFVRASKLE 481

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVI 589
           EA     +M +KG  PTVV+Y T+I+  C+  R  D    +++ML K  +     Y+ ++
Sbjct: 482 EAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLM 541

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           + LC    ++ A  +  +VL    + D +  ++L+    + G    A  +   M   N +
Sbjct: 542 DGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCL 601

Query: 650 PDL 652
           P+L
Sbjct: 602 PNL 604



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/544 (24%), Positives = 252/544 (46%), Gaps = 56/544 (10%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLS 200
            Y ++++I  K +    AK +L  M  + +  +P+ +SY  V     ++G L +A+ V  
Sbjct: 151 TYNILIKISVKKRQFVEAKGLLDWMWSKDL--KPDVYSYGTVINGMVKSGDLVSALEVFD 208

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM-QLAGITPNVLTYNCLIKGYCDL 259
            M +  + P+++  N  I          +     ER+ + + + PNV+TYN +I G C +
Sbjct: 209 EMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKM 268

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R  +++++ + M    C  D  +Y +++  LC    +    ++ ++MV  S        
Sbjct: 269 GRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTY 328

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               N F   G+I+E+ EL   M +  C  +VV+Y   + G     ++++A  + + +  
Sbjct: 329 NALLNGFCRAGKIKESFELWVMMGKENC-HNVVSYNIFIRGLFENRKVEEAISVWELLRR 387

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G   ++ +Y   ++GLC NG   +A +++  +++     +A  YS ++ GL ++G++ E
Sbjct: 388 RGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDE 447

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +V +M K G   +P   N LI    R  K++ A  F +E   KGC+  VV++ +LI 
Sbjct: 448 ALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLIN 507

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C+     +A S + +M      PD +TY+ ++D L +  +++ A  L  ++L KGL P
Sbjct: 508 GLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEP 567

Query: 548 TVVTYRTVIHRYCQVGRVEDLL-------------------KLLEKMLSKQKCRTA---- 584
            V  +  ++H  C  G++ED L                    L++ +   ++C  A    
Sbjct: 568 DVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIW 627

Query: 585 --------------YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
                         YN  ++ LCS G + +   +    L+      + T ++LV + L  
Sbjct: 628 ACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKL 687

Query: 631 GIPL 634
           G PL
Sbjct: 688 G-PL 690



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 188/410 (45%), Gaps = 24/410 (5%)

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
           GA  V + M +R +      ++ L+  + RAGK++ +  +  MM K     N++  N  I
Sbjct: 308 GAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKEN-CHNVVSYNIFI 366

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
             L    K+ +A+   E ++  G   +  TY  LI G C    +  A+K++ E    G  
Sbjct: 367 RGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDK 426

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPD 338
            D  +Y +++  L K                       QGR++EA  +V+QM + GC   
Sbjct: 427 LDAFAYSSIVDGLSK-----------------------QGRVDEALGIVHQMDKYGCELS 463

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
                 ++NGF R  +L++A    ++M   GC P  VSY   +NGLC   +  +A   + 
Sbjct: 464 PHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVK 523

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
              E+ W P+ ITYS++M GL +  K+  A ++ R+++ KG  P     N+L+  LC  G
Sbjct: 524 EMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAG 583

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           K++ A           C  N+V   +L+ G  +  + E A  +   M+     PD ++Y 
Sbjct: 584 KIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYN 643

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
             +  L   GR+ +   L    L  G++PT +T+  ++    ++G ++ L
Sbjct: 644 ITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDSL 693



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 146/298 (48%), Gaps = 12/298 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++  L K      A ++L+     G +    A+S ++   S+ G++  A+ ++
Sbjct: 393 DSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIV 452

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M K     +  +CN  I+  V  +KL +A+ F   M+  G +P V++YN LI G C  
Sbjct: 453 HQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKA 512

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL--------MEKMVNDS 311
            R  DA   + EM  K   PD ++Y  +M  LC+ K+I    +L        +E  V   
Sbjct: 513 ERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMH 572

Query: 312 N-LFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N L H     G+IE+A  L + M Q  C+P++VT+  +++G  +  E + A  +   M+ 
Sbjct: 573 NILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFK 632

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
           +G +P+ +SY   L GLC  G+  +   + + + +    P +IT+ +++  + + G L
Sbjct: 633 NGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPL 690



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 162/360 (45%), Gaps = 27/360 (7%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           H+ + Y + +  L + +  + A  V  L+ RRG       +  L+    + G L  A+ +
Sbjct: 357 HNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKI 416

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG--ITPNVLTYNCLIKGY 256
           L   +      +    ++ +  L    ++ +AL  + +M   G  ++P+V   N LI G+
Sbjct: 417 LKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVC--NPLINGF 474

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
               ++++AI    EM  KGCSP  VSY T++  LCK +                     
Sbjct: 475 VRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAE--------------------- 513

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
             R  +A   V +M +    PD++TY+ +++G C+  ++D A  + +Q+   G +P+   
Sbjct: 514 --RFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTM 571

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           +   ++GLC  GK  +A  + +  ++    PN +T++ +M GL +  +   A  +   M 
Sbjct: 572 HNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMF 631

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           K GF P  +  N+ ++ LC  G++        + L  G     + +  L+R   + G L+
Sbjct: 632 KNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLD 691



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 74/152 (48%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           ++ D I Y ++++ L + K    A  + R +  +G+E      + LM     AGK+ +A+
Sbjct: 530 WKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDAL 589

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            + S M+++   PNL+  NT +  L    +   A      M   G  P++++YN  +KG 
Sbjct: 590 LLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGL 649

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           C   RI D I L D+    G  P  +++Y ++
Sbjct: 650 CSCGRISDGIALFDDALKNGILPTSITWYILV 681


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/528 (25%), Positives = 245/528 (46%), Gaps = 22/528 (4%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
            AD R A      A      R D   +  +++          A  +LR M R      P+
Sbjct: 138 HADVRAAFGLLVAAGA----RPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPD 193

Query: 178 AFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
           AFSY  ++    R+GK  +A+ V   M    VAPN +  NT I   V G  L    R  +
Sbjct: 194 AFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRD 253

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
           +M   G  PNV+TYN L+ G C   R+ +   L+DEM      PD  +Y  +   L +  
Sbjct: 254 QMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTG 313

Query: 296 RIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
             + +  L  + +               N     G++ +AK++   +   G +P  V Y 
Sbjct: 314 ESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYN 373

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            ++NG+C+V +L  A  + +QM     +P+ ++Y A +NGLC      +A +++   E+ 
Sbjct: 374 TLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKS 433

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+  T++ ++      G+L +   V+ +M +KG     +    ++++ C+ GK+  A
Sbjct: 434 GVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEA 493

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
              + + + K  A N   + S+I  + + GD E+AL L++ M         VTY  ++  
Sbjct: 494 VAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKG 553

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS---KQK 580
           L ++ +++EA EL+  + ++GL P VV+Y T+I   C  G  +  L+LL++M     +  
Sbjct: 554 LCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPT 613

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
            RT +  ++  L S G + +   +  ++L    +  +S   ++V++Y+
Sbjct: 614 LRTCHT-LVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 660



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 123/521 (23%), Positives = 236/521 (45%), Gaps = 30/521 (5%)

Query: 175 RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKA--AVAPNLLICNTAIHVLVVGNKLAKA 230
           RP+ F++  ++ A   AG L  A+ +L  M ++  A  P+    N  I  L    K + A
Sbjct: 154 RPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDA 213

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           L+  + M   G+ PN +TYN +I G+     ++   +L D+M   G  P+ V+Y  ++  
Sbjct: 214 LKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSG 273

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LC+                        GR++E + L+++M+    +PD  TY+ + +G  
Sbjct: 274 LCR-----------------------TGRMDETRALMDEMASHSMLPDGFTYSILFDGLT 310

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           R GE      +  +    G      + +  LNGLC +GK  +A+++          P  +
Sbjct: 311 RTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTV 370

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            Y+ +++G  +   L  A  +  +M  +   P  +  N LI  LC+   +  A+  + E 
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 430

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
              G   +V  F +LI  +   G LE+  ++L DM       D +++ +++ A  KNG++
Sbjct: 431 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQV 588
            EA  ++  M+ K + P    Y ++I  Y + G  E  L L+EKM +     +   YN +
Sbjct: 491 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLL 550

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           ++ LC    ++EA +++  +     + D  + + ++ +  NKG    A ++   M    +
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
            P L+ C  +   L   G+  + + L  + + + +++P S 
Sbjct: 611 RPTLRTCHTLVSALASAGRVHDMECLYQQMLHK-NVEPSSS 650



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 197/427 (46%), Gaps = 27/427 (6%)

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           P+L  CN  +  L+   + A        +  AG  P+   +N +++       +  A+ +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 269 IDEMPLK--GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKEL 326
           +  M        PD  SY  V+  L +                        G+  +A ++
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWR-----------------------SGKGSDALKV 216

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
            ++M  MG  P+ +TY  +++G  + G+L+   ++  QM H G KPN V+Y   L+GLC 
Sbjct: 217 FDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCR 276

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G+  E R +++        P+  TYS++  GL R G+      +  E +KKG       
Sbjct: 277 TGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYT 336

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            ++L+  LC++GK+  AK+  +  ++ G     V + +LI G+CQ  DL  A  + + M 
Sbjct: 337 CSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMK 396

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                PD +TY  +I+ L K   V +A +L+M+M   G+ P+V T+ T+I  Y   G++E
Sbjct: 397 SRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLE 456

Query: 567 DLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
               +L  M  K  +    ++  V++  C  G + EA  IL  ++      +A   + ++
Sbjct: 457 KCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSII 516

Query: 625 ESYLNKG 631
           ++Y+  G
Sbjct: 517 DAYIESG 523



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/407 (22%), Positives = 175/407 (42%), Gaps = 23/407 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++ + L++T   Q    +     ++G+       S L+    + GK+  A  V 
Sbjct: 298 DGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVF 357

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            M+    + P  +I NT I+       L  A    E+M+   I P+ +TYN LI G C L
Sbjct: 358 EMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL 417

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             +  A  L+ EM   G  P   ++ T++                       + +   G+
Sbjct: 418 EMVTKAEDLVMEMEKSGVDPSVETFNTLI-----------------------DAYGTAGQ 454

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +E+   +++ M Q G   DV+++ +VV  FC+ G++ +A  +L  M +    PN   Y +
Sbjct: 455 LEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNS 514

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++    +G + +A  ++   +    + + +TY++++ GL R  ++ EA +++  +  +G
Sbjct: 515 IIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 574

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  V  N +I + C +G  D A + +QE    G    +    +L+      G + +  
Sbjct: 575 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDME 634

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            L   M     +P +  Y  ++DA  +     +   L  +M  KG+ 
Sbjct: 635 CLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIA 681



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 142/310 (45%), Gaps = 26/310 (8%)

Query: 134 QWRYRH---DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
           Q + RH   D I Y  ++  L K ++   A+ ++  M + G++   E F+ L+ AY  AG
Sbjct: 394 QMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 453

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L     VLS MQ+  +  +++   + +       K+ +A+  L+ M    + PN   YN
Sbjct: 454 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 513

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            +I  Y +    + A+ L+++M   G S   V+Y  ++  LC+                 
Sbjct: 514 SIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSS--------------- 558

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                   +I+EA+EL+  +   G  PDVV+Y  +++  C  G+ D+A ++LQ+M  +G 
Sbjct: 559 --------QIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P   +    ++ L   G+  +   +      +   P++  Y +++    R    S+   
Sbjct: 611 RPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 670

Query: 431 VVREMVKKGF 440
           + +EM +KG 
Sbjct: 671 LKKEMSEKGI 680



 Score = 38.9 bits (89), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 4/141 (2%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y ++L+ L ++     A+ ++  +  +G+  RP+  SY  ++ A    G    A+ +L
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGL--RPDVVSYNTIISACCNKGDTDKALELL 602

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M K  + P L  C+T +  L    ++       ++M    + P+   Y  ++  Y   
Sbjct: 603 QEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRC 662

Query: 260 HRIKDAIKLIDEMPLKGCSPD 280
                   L  EM  KG + D
Sbjct: 663 ENDSKVASLKKEMSEKGIAFD 683


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 145/599 (24%), Positives = 272/599 (45%), Gaps = 52/599 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++  L +      A+ ++  M R G+E     ++  +V Y R   + +A  + 
Sbjct: 208 DVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLY 267

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  V P+++  +  +  L    + ++A      M+  G  PN +TY  LI      
Sbjct: 268 EEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKA 327

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD--- 316
            R  +++ L+ E+  +G   D + Y  +M +LCKE +I E +D+    ++D++  +    
Sbjct: 328 QRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTY 387

Query: 317 ---------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     G ++ A++++++M +    P+VVT+++++NG  + G + +A   +++M  
Sbjct: 388 TVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKE 447

Query: 368 HGCKPNTVSYT-----------------------------------AFLNGLCHNGKSLE 392
            G  PN V+Y                                    + +NGL  NGK  +
Sbjct: 448 RGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEK 507

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A  +     E     + + Y+ ++ GL + G L  A  V +E+ +K   P  V  N+ I 
Sbjct: 508 AEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFIN 567

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC  GK   A+ F++E  + G   + V + ++I    ++G   +AL LL+ M      P
Sbjct: 568 CLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKP 627

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL-LKL 571
           + +TY+T+I  L + G VE+A  L+ +M S G  PT +T+R V+   C  GR  DL L++
Sbjct: 628 NLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQA-CSQGRRSDLILEI 686

Query: 572 LEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
            E M++   C   T YN ++  LC  G   +A  +L ++       D  T + L+  +  
Sbjct: 687 HEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFK 746

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
            G    A+    +M    + P++     +   L   G+  E+D ++    +RG I+P +
Sbjct: 747 SGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRG-IEPSN 804



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/502 (26%), Positives = 241/502 (48%), Gaps = 28/502 (5%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +++ +M  +S  G L     +L+ M K  V  + +  NT +  L    ++ +A    E M
Sbjct: 105 SYNVVMSGFSEQGGLAPEA-LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVM 163

Query: 238 QLAGITP--NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
              G     +V+ +N L+ GYC +  ++ A  + + M  +G   D V Y +++  LC+  
Sbjct: 164 VRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCR-- 221

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                                 G ++ A+++V+ M + G  P+VVTYT  +  +CR   +
Sbjct: 222 ---------------------AGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAV 260

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D A  + ++M   G  P+ V+ +A + GLC +G+  EA  +    E+    PN +TY ++
Sbjct: 261 DDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCML 320

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +  L +  + +E+  ++ E+V +G     +    L+  LC+EGK+D AK   +  L+   
Sbjct: 321 IDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNH 380

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             N V +T LI   C+ G+++ A  +L +M      P+ VT+++II+ L K G V +AT+
Sbjct: 381 TPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATD 440

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
            M +M  +G+ P VVTY TVI    +    E  L +  +ML +  +  +   + ++  L 
Sbjct: 441 YMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLK 500

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
             G +E+A  +  ++       D      L++     G    A+KV   +  +NL+PD  
Sbjct: 501 KNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAV 560

Query: 654 LCKKVSERLILEGKSEEADTLM 675
           +       L + GKS+EA++ +
Sbjct: 561 VYNVFINCLCMLGKSKEAESFL 582



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 140/537 (26%), Positives = 249/537 (46%), Gaps = 17/537 (3%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  +G+      ++ L+    RAG++  A  ++  M++  V PN++     I      N 
Sbjct: 200 MKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNA 259

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +  A    E M   G+ P+V+T + L+ G C   R  +A  L  EM   G +P+ V+Y  
Sbjct: 260 VDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCM 319

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFH------------DQGRIEEAKELVNQMSQMG 334
           ++  L K +R  E   L+ ++V+   +               +G+I+EAK++        
Sbjct: 320 LIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDN 379

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P+ VTYT +++  C+ G +D A+++L +M      PN V++++ +NGL   G   +A 
Sbjct: 380 HTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKAT 439

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           + +   +E    PN +TY  V+ G  +      A DV  EM+ +G       ++ L+  L
Sbjct: 440 DYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGL 499

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            + GK++ A+   +E   +G  ++ VN+T+LI G  + G+L  A  +  ++      PD 
Sbjct: 500 KKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDA 559

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           V Y   I+ L   G+ +EA   + +M S GL P  VTY T+I    + G+    LKLL  
Sbjct: 560 VVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNG 619

Query: 575 M--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG- 631
           M   S +     Y+ +I  L   G +E+A  +L + + ++  +  S  H  V    ++G 
Sbjct: 620 MKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNE-MSSSGFSPTSLTHRRVLQACSQGR 678

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
              L  ++   M N  L  D+ +   +   L   G + +A  ++     RG I P +
Sbjct: 679 RSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRG-IAPDT 734



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 128/540 (23%), Positives = 239/540 (44%), Gaps = 55/540 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I+Y  +++ L K      AK + R             ++ L+ A  +AG +  A  VL
Sbjct: 348 DLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVL 407

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG---- 255
           S M++ +++PN++  ++ I+ LV    + KA  ++  M+  GI PNV+TY  +I G    
Sbjct: 408 SEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKC 467

Query: 256 -----YCDLH--------------------------RIKDAIKLIDEMPLKGCSPDKVSY 284
                  D++                          +I+ A  L  EM  +G   D V+Y
Sbjct: 468 LGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNY 527

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ-------------GRIEEAKELVNQMS 331
            T++  L K   +     + +++  + NL  D              G+ +EA+  + +M 
Sbjct: 528 TTLIDGLFKTGNLPAAFKVGQEL-TEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQ 586

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
             G  PD VTY  ++    R G+  +A K+L  M     KPN ++Y+  + GL   G   
Sbjct: 587 STGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVE 646

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE-MVKKGFFPTPVEINLL 450
           +A+ ++N      ++P ++T+  V+     +G+ S+    + E M+  G        N L
Sbjct: 647 KAKYLLNEMSSSGFSPTSLTHRRVLQAC-SQGRRSDLILEIHEWMMNAGLCADITVYNTL 705

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           ++ LC  G    A   ++E   +G A + + F +LI G  + G L+ A S  D M     
Sbjct: 706 VRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGI 765

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P+  T+ T++  L   GR+ E+  ++ +M  +G+ P+ +TY  ++  Y +     + ++
Sbjct: 766 SPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVR 825

Query: 571 LLEKMLSK---QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           L  +M+ K    K  T YN +I +    G + +A ++  ++        + T  +LV  +
Sbjct: 826 LYCEMVGKGFLPKVST-YNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGW 884



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 187/410 (45%), Gaps = 12/410 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L KT     A +V + +  + +      ++  +      GK + A   L
Sbjct: 523 DHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFL 582

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             MQ   + P+ +  NT I       K AKAL+ L  M+ + I PN++TY+ LI G  + 
Sbjct: 583 EEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEA 642

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
             ++ A  L++EM   G SP  +++  V+    + +R   + ++ E M+N     D  ++
Sbjct: 643 GAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVY 702

Query: 315 HD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +         G   +A  ++ +MS  G  PD +T+ A++ G  + G LD A     QM +
Sbjct: 703 NTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLY 762

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           HG  PN  ++   L GL   G+  E+  ++N  ++    P+ +TY +++ G  ++    E
Sbjct: 763 HGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVE 822

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +  EMV KGF P     N LI    + G M  AK+   E  N+G       +  L+ 
Sbjct: 823 AVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVS 882

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           G+ +  +  E    L DM      P   T ++I  A SK G   EA  L+
Sbjct: 883 GWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLL 932



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 102/437 (23%), Positives = 197/437 (45%), Gaps = 12/437 (2%)

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           L K    + A+ + R M  RG+      ++ L+    + G L  A  V   + +  + P+
Sbjct: 499 LKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPD 558

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
            ++ N  I+ L +  K  +A  FLE MQ  G+ P+ +TYN +I       +   A+KL++
Sbjct: 559 AVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLN 618

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND----SNLFH-------DQGR 319
            M      P+ ++Y T++  L +   +++ + L+ +M +     ++L H        QGR
Sbjct: 619 GMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGR 678

Query: 320 IEE-AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
             +   E+   M   G   D+  Y  +V   C  G   +A  +L++M   G  P+T+++ 
Sbjct: 679 RSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFN 738

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           A + G   +G    A    +       +PN  T++ ++ GL   G++ E+  V+ EM K+
Sbjct: 739 ALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKR 798

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P+ +  ++L+    ++     A +   E + KG    V  + +LI  F + G + +A
Sbjct: 799 GIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQA 858

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             L ++M      P + TY  ++   SK     E  + +  M  KG  P+  T  ++   
Sbjct: 859 KELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRA 918

Query: 559 YCQVGRVEDLLKLLEKM 575
           + + G   +  +LL+ +
Sbjct: 919 FSKPGMSWEARRLLKNL 935



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 149/347 (42%), Gaps = 47/347 (13%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D + Y  M+   S+      A ++L  M R  I+     +S L+V    AG +  A Y
Sbjct: 591 KPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKY 650

Query: 198 VLSMMQKAAVAP-----------------------------------NLLICNTAIHVLV 222
           +L+ M  +  +P                                   ++ + NT + VL 
Sbjct: 651 LLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLC 710

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
                 KA+  LE M   GI P+ +T+N LI G+     + +A    D+M   G SP+  
Sbjct: 711 YNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVA 770

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFHD--------QGRIEEAKELVNQM 330
           ++ T++G L    RI E   ++ +M    +  SNL +D        Q    EA  L  +M
Sbjct: 771 TFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEM 830

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              G +P V TY A+++ F +VG + QAK++  +M + G  P + +Y   ++G       
Sbjct: 831 VGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNG 890

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
            E R+ +   +E+ ++P+  T S +     + G   EA  +++ + K
Sbjct: 891 TEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYK 937



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 157/353 (44%), Gaps = 6/353 (1%)

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM- 396
           D V+Y  V++GF   G L   + +L +M   G   + V+    L GLC +G+   A  + 
Sbjct: 102 DTVSYNVVMSGFSEQGGL-APEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 397 -INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
            +          + + ++ ++ G  + G +  A  V   M  +G     V  N L+  LC
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           R G++D A+  +      G   NVV +T  I  +C++  +++A SL ++M      PD V
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           T + ++  L K+GR  EA  L  +M   G  P  VTY  +I    +  R  + L LL ++
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340

Query: 576 LSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           +S+        Y  +++ LC  G ++EA  +    L      +  T  VL+++    G  
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNV 400

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
             A +V   M  +++ P++     +   L+  G   +A   M    ERG I P
Sbjct: 401 DGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERG-IDP 452


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 148/606 (24%), Positives = 270/606 (44%), Gaps = 85/606 (14%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI--------CNT-- 216
           M  +G+      ++ L+  + RAG++  A  VL MM++A V PN+          C T  
Sbjct: 195 MTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKG 254

Query: 217 ---------------------AIHVLVVG----NKLAKALRFLERMQLAGITPNVLTYNC 251
                                 +  LV G     + ++A      M   G  PN +TY  
Sbjct: 255 VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCT 314

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI       R K+ + L+ EM  +G   D V+Y  +M +L K+ +  EV+D +   ++D+
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                       +       ++EA++++ +M +    P+VVT+++V+NGF + G LD+A 
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 360 KMLQQMYHHGCKPNTVSYT-----------------------------------AFLNGL 384
           +  + M   G  PN V+Y                                    + +NGL
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             NGK  EA  +   +     + + + Y+ ++ GL + G +  A    +E++ +   P  
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N+ I  LC  GK   AK F+ E  N G   +   + ++I   C+KG+  +AL LL +
Sbjct: 555 VVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M +    P+ +TY T++  L   G VE+A  L+ +M+S G  P+ +T+R V+    Q  R
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674

Query: 565 VEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           ++ +L + E M++       T YN +++ LC  G   +A  +L ++L +    D  T + 
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNA 734

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L+  +        A+    +M ++N+ P++     +   L   G+  EA T+++  +E+ 
Sbjct: 735 LILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE-MEKS 793

Query: 683 HIQPKS 688
            ++P +
Sbjct: 794 GLEPNN 799



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 129/537 (24%), Positives = 235/537 (43%), Gaps = 49/537 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K       K  LR      +      ++ L+ A  +A  +  A  VL
Sbjct: 343 DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVL 402

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++ +++PN++  ++ I+  V    L KA  +   M+  GI PNV+TY  LI G+   
Sbjct: 403 LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462

Query: 260 H-----------------------------------RIKDAIKLIDEMPLKGCSPDKVSY 284
                                               +I++A+ L  +    G S D V+Y
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 285 YTVMGYLCKE----KRIKEVRDLMEK-MVNDS---NLFHD----QGRIEEAKELVNQMSQ 332
            T++  L K        K  ++LM++ M+ D+   N+F +     G+ +EAK  + +M  
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           MG  PD  TY  ++   CR GE  +A K+L +M     KPN ++Y   + GL   G   +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A+ ++N      ++P+++T+  V+    +  +L    D+   M+  G        N L+Q
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC  G    A   ++E L  G A + + F +LI G C+   L+ A +    M      P
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           +  T+ T++  L   GR+ EA  ++++M   GL P  +TY  +   + +     + ++L 
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY 822

Query: 573 EKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            +M+ K      + YN +I +    G + +A ++   + +      + T  +LV  +
Sbjct: 823 CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 128/540 (23%), Positives = 237/540 (43%), Gaps = 75/540 (13%)

Query: 176 PEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
           P + + L+ ++ R   LR A+ +L   +   VA N+L+   + H        A A   L 
Sbjct: 73  PASLNALLYSHCRLRLLRPAIALLRSSRPTTVAYNILLAALSDH--------AHAPAVLA 124

Query: 236 RMQLAGITPNVLTYNCLIKGYC-------------------------------DLHRIKD 264
            M   G+  + +T N L+ G C                               D+    D
Sbjct: 125 EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGFGD 184

Query: 265 ---AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
              A+ + D M  +G   D V Y T++   C+                        G+++
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCR-----------------------AGQVD 221

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A+ +++ M + G  P+V TYT  +  +CR   +++A  + + M  +G   + V+ +A +
Sbjct: 222 AARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALV 281

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
            GLC +G+  EA  +    ++    PN +TY  ++  L + G+  E   ++ EMV +G  
Sbjct: 282 AGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV 341

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
              V    L+  L ++GK D  K  ++  L+   + N V +T LI   C+  +++EA  +
Sbjct: 342 MDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQV 401

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L +M      P+ VT++++I+   K G +++ATE    M  +G+ P VVTY T+I  + +
Sbjct: 402 LLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFK 461

Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
               +  L++   ML +  +  +   + ++  L   G +EEA  +     + AS +  S 
Sbjct: 462 FQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMAL----FKDASGSGLSL 517

Query: 620 CHV----LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
            HV    L++     G    A+K    + +RN++PD  +       L + GK +EA + +
Sbjct: 518 DHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFL 577



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 163/360 (45%), Gaps = 12/360 (3%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GK + A   L+ M+   + P+    NT I       + AKAL+ L  M+++ I PN++TY
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N L+ G      ++ A  L++EM   G SP  +++  V+    + +R+  + D+ E M+N
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687

Query: 310 -----DSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                D  +++         G   +A  ++ +M   G  PD +T+ A++ G C+   LD 
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDN 747

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A     QM H    PN  ++   L GL   G+  EA  ++   E+    PN +TY ++  
Sbjct: 748 AFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILAT 807

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  ++    EA  +  EMV KGF P     N LI    + G M  AK+  ++   +G   
Sbjct: 808 GHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHP 867

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
               +  L+ G+ +  +  E    L DM      P   T + I  A SK G   +A  L+
Sbjct: 868 TSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 182/412 (44%), Gaps = 24/412 (5%)

Query: 44  DDHFMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLL 103
           D  F   D    ++  +E + R +L +    +  +  +C L + + A S     E+RN+ 
Sbjct: 527 DGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKS--FLTEMRNM- 583

Query: 104 RSLKPRQ------ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
             LKP Q      I +  R + +   AL+  +   +    + + I Y  ++  L  T   
Sbjct: 584 -GLKPDQSTYNTMIVSHCR-KGETAKALKLLHEM-KMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           + AK +L  M   G          ++ A S++ +L   + +   M  A +  ++ + NT 
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           + VL       KA   LE M  +GI P+ +T+N LI G+C    + +A     +M  +  
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFHD--------QGRIEEAKE 325
           SP+  ++ T++G L    RI E   ++ +M    +  +NL +D        Q    EA  
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMR 820

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L  +M   G +P V TY A+++ F + G + QAK++ + M   G  P + +Y   ++G  
Sbjct: 821 LYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWS 880

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
                 E ++ +   +E+ ++P+  T S +     + G   +A  +++ + +
Sbjct: 881 RIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 240/510 (47%), Gaps = 36/510 (7%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLE--------- 149
           L++LL ++ P  + ++     D   ALQF YW  +   ++H+   Y  +L          
Sbjct: 59  LKSLLPAITPSHVSSLFSLNLDPHTALQFSYWISQTPNFKHNVDSYASLLTLIDHHKIVS 118

Query: 150 -----ILSKTKLCQGAKRVL------RLMARRGI-ECRPEAFSYLMVAYSRAGKLRNAMY 197
                I+S  K C  A   L      R M++  I +   + ++ L+   +R G +     
Sbjct: 119 DVPKIIVSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQ 178

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           + + M +  V+ ++   N  I+V      + +A +F+ +M  AG++P+  T    I GYC
Sbjct: 179 LYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYC 238

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---SNLF 314
               +  A ++ +EMP +    ++VSY  ++  LC+  RI E   L  +M +D    N++
Sbjct: 239 RSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVY 294

Query: 315 HDQGRIE--------EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                I+        +A  L+++M +   +PD++TY +++ G CR G LD A ++L  M 
Sbjct: 295 TYTALIKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMK 354

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  P+  +Y  F++ LC + +  EAR + ++  EE  + N I YSV++ G  + GK+ 
Sbjct: 355 ERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVD 414

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA  +  +M+ K   P     N LI  LC  G +  A     + +  G    V  F  LI
Sbjct: 415 EAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILI 474

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
               ++GD ++A   L  M    + P   TY   I+     G+V+EA ++M++M  +G+ 
Sbjct: 475 GRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVP 534

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           P   TY ++I  Y ++G       +L+ M 
Sbjct: 535 PDDFTYTSLIKAYGKLGLTYSAFDVLKSMF 564



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 216/451 (47%), Gaps = 17/451 (3%)

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRI-KDAIKLIDEMPLKGC--SPDKVSYYTVMGYLCKE 294
           Q      NV +Y  L+    D H+I  D  K+I  M +K C  +PD +     +  +C++
Sbjct: 93  QTPNFKHNVDSYASLLT-LIDHHKIVSDVPKIIVSM-IKCCYSAPDAL----FVSDICRK 146

Query: 295 KRIKEVRDLMEKMVNDS-NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
               ++  L  K  N+   L    G ++E  +L  +M +     D+ T+  ++N +C++G
Sbjct: 147 MSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMG 206

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            + +AK+ + +M   G  P+  + T+F+ G C +     A  +     EE    N ++Y+
Sbjct: 207 FVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVF----EEMPNRNEVSYN 262

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++HGL   G++ EA  +   M     +P       LI+ LCR+  +  A   + E L +
Sbjct: 263 QLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLER 321

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
               +++ + SLI G C+ G L+ A  LL  M      PD  TY   ID L K+ RVEEA
Sbjct: 322 NLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEA 381

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIEN 591
             L   +  +G+   V+ Y  +I  YC+VG+V++   L EKMLSK     AY  N +I  
Sbjct: 382 RRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHG 441

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LCS G L+EA  +  ++++   K    T ++L+   L +G    A+K   +M +    P 
Sbjct: 442 LCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPV 501

Query: 652 LKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +      E     GK +EA+ +M++  E G
Sbjct: 502 ARTYNAFIEVYCSAGKVQEAEDMMVQMKEEG 532



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/531 (23%), Positives = 231/531 (43%), Gaps = 54/531 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   + +M+ +  K    + AK+ +  M + G+   P+ F+    ++ Y R+  + +A  
Sbjct: 191 DIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLS--PDYFTSTSFILGYCRSKDVDSAFR 248

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   M       N +  N  IH L    ++ +A+    RM+     PNV TY  LIKG C
Sbjct: 249 VFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLC 304

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               +  A+ L+DEM  +   PD ++Y +++   C+   +     L+  M  +  L  DQ
Sbjct: 305 R-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLM-KERGLVPDQ 362

Query: 318 -------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                         R+EEA+ L + +++ G   +V+ Y+ +++G+C+VG++D+A  + ++
Sbjct: 363 RTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEK 422

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M    C PN  ++ A ++GLC  G   EA  + +   +    P   T+++++  + ++G 
Sbjct: 423 MLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGD 482

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             +A   +++M+  G  P     N  I+  C  GK+  A+  M +   +G   +   +TS
Sbjct: 483 FDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTS 542

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII------------------DALSK 526
           LI+ + + G    A  +L  M+    +P   T+ ++I                  +++S 
Sbjct: 543 LIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSN 602

Query: 527 NGRVEEAT-----------ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            G V  +            EL  +M   G  P    Y  +I   C+V  +   LKLL++M
Sbjct: 603 FGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQM 662

Query: 576 LSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
             +        +N VI   C      EA  I+  ++ +        C  L+
Sbjct: 663 QKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLI 713



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/461 (21%), Positives = 200/461 (43%), Gaps = 78/461 (16%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+  +Y  L+    RAG L +A  +LS+M++  + P+       I  L   N++ +A R 
Sbjct: 325 PDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRL 384

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
            + +   G++ NV+ Y+ LI GYC + ++ +A  L ++M  K CSP+  ++  ++  LC 
Sbjct: 385 FDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCS 444

Query: 294 EKRIKEVRDLMEKMV------------------------NDSN----------------- 312
              +KE   L ++MV                        +D++                 
Sbjct: 445 AGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVART 504

Query: 313 ------LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                 ++   G+++EA++++ QM + G  PD  TYT+++  + ++G    A  +L+ M+
Sbjct: 505 YNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMF 564

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAR-----------------------------EMI 397
              C+P+  ++ + +  L      +E                               E+ 
Sbjct: 565 DADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELF 624

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
              E+   TP++  Y  ++ G+ +   L  A  ++ +M K+G  P+ +  N +I   C+ 
Sbjct: 625 EEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKL 684

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
            K   A   +++ +  G +  + +  +LI G  ++G+ E   S+   +  C  + D + +
Sbjct: 685 QKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAW 744

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             +ID + K G VEE ++L  +M   G   +  TY  +  +
Sbjct: 745 KILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQK 785



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/357 (20%), Positives = 145/357 (40%), Gaps = 43/357 (12%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P A+++  L+     AG L+ A+ +   M K  + P +   N  I  ++       A 
Sbjct: 428 CSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAH 487

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
           + L++M  +G  P   TYN  I+ YC   ++++A  ++ +M  +G  PD  +Y +++   
Sbjct: 488 KCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAY 547

Query: 292 CKEKRIKEVRDLMEKMVNDS-------------NLFHDQGRIEEAKE------------- 325
            K        D+++ M +                LF  +  +E++ E             
Sbjct: 548 GKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVP 607

Query: 326 ---------------LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                          L  +M + GC PD   Y  +++G C+V  L  A K+L QM   G 
Sbjct: 608 GSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGI 667

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            P+ + + A ++  C   K  EA  ++        +P       ++ GL  EG+      
Sbjct: 668 SPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNS 727

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           V +++   G+    +   +LI  + ++G ++   +  +E    GC  +   ++ L +
Sbjct: 728 VFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQ 784



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/329 (20%), Positives = 128/329 (38%), Gaps = 41/329 (12%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M + G++     F+ L+    + G   +A   L  M  +   P     N  I V     K
Sbjct: 458 MVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGK 517

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +A   + +M+  G+ P+  TY  LIK Y  L     A  ++  M    C P   ++ +
Sbjct: 518 VQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLS 577

Query: 287 VMGYLCKEKRIKE-----------------------------VRDLMEKM-----VNDSN 312
           ++  L  ++ + E                             V +L E+M       DS 
Sbjct: 578 LIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSK 637

Query: 313 ----LFHDQGRIEE---AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
               L     ++E    A +L++QM + G  P  + + AV++  C++ +  +A  +++ M
Sbjct: 638 CYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDM 697

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  P        + GL   G++     +        +  + I + +++ G+ ++G +
Sbjct: 698 ICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLV 757

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSL 454
            E   +  EM K G   +P   ++L Q L
Sbjct: 758 EEFSQLFEEMEKNGCNFSPRTYSILTQKL 786


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 229/458 (50%), Gaps = 16/458 (3%)

Query: 150 ILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA-MYVLSMMQKAAVA 208
           + ++ +L + A  V   M+ RG+      + Y++V Y R G +  A  ++  MM++  V 
Sbjct: 218 VAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVV 277

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
            N  +    I      + + +A+ F  ++   G++PN++ Y+ +I G C    +K A +L
Sbjct: 278 DNATL-TLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFEL 336

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-------------FH 315
           ++EM   G  P+  ++ +++  LCK+   +    L  K++   N              + 
Sbjct: 337 LEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYC 396

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
            + ++  A+ L  +M + G +P+  TYT +++G C+ G   +A ++++ M + G  PNT 
Sbjct: 397 KEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTC 456

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y + ++GLC  G++ EA +++NT  +     + +TY++++    +   +++A   + +M
Sbjct: 457 TYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKM 516

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            K GF P       LI + CR+  M  ++K   E +  G A     +TS+I G+C++  +
Sbjct: 517 FKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKV 576

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
             A+     M      PD+++Y  +I  L K  R++EA +L   M+ KGL P  VT  T+
Sbjct: 577 SLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTL 636

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLC 593
            + YC+       + +LE++  K   RT +  +I  LC
Sbjct: 637 TYEYCKTEDFASAMVILERLNKKLWIRTVHT-LIRKLC 673



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 132/574 (22%), Positives = 237/574 (41%), Gaps = 78/574 (13%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGI 172
           A+L S+    VAL FFYWA    ++R     Y+M L I+            + L+ +  +
Sbjct: 126 ALLASEEGSMVALSFFYWAVGFPKFR-----YFMRLYIVC----------TMSLVGKCNL 170

Query: 173 ECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           E   E    ++  ++  GKL+ A+ ++  M+   +     + N  I V       A  +R
Sbjct: 171 ERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILV-------AAEMR 223

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY-YTVMGYL 291
            +E                             A  + DEM  +G  PD  +Y Y ++GY 
Sbjct: 224 LVEY----------------------------AGNVFDEMSARGVYPDSCTYKYIIVGY- 254

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           C+                        G + EA   + +M + G + D  T T ++  FC 
Sbjct: 255 CR-----------------------NGNVLEADRWICEMMERGFVVDNATLTLIITAFCE 291

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
              +++A     ++   G  PN ++Y++ ++GLC  G   +A E++    +  W PN  T
Sbjct: 292 KSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYT 351

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           ++ ++HGL ++G    A  +  ++++   + P       +I   C+E K+  A+   +  
Sbjct: 352 HTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERM 411

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
             +G   N   +T+LI G C+ G+  +A  L++ M      P+T TY +I+D L K GR 
Sbjct: 412 KEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRA 471

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQV 588
           EEA +L+       +    VTY  +I   C+   +   L  L KM     Q     Y  +
Sbjct: 472 EEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTL 531

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I   C    ++++ K+  +V++        T   ++  Y  +    LA K   +M +   
Sbjct: 532 IAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGC 591

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            PD      +   L  E + +EA  L    +++G
Sbjct: 592 APDSISYGALISGLCKESRLDEARQLYDTMIDKG 625



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 181/411 (44%), Gaps = 26/411 (6%)

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           C  +R  EV + M        +F + G+++EA +++  M   G    +V  T V+N    
Sbjct: 168 CNLERAHEVVECM------VGVFAEIGKLKEAVDMILDMRNQG----LVLTTRVMNRIIL 217

Query: 352 VGE----LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           V      ++ A  +  +M   G  P++ +Y   + G C NG  LEA   I    E  +  
Sbjct: 218 VAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVV 277

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           +  T ++++     +  ++ A     ++ K G  P  +  + +I  LC+ G +  A + +
Sbjct: 278 DNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELL 337

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD---PDTVTYTTIIDAL 524
           +E +  G   NV   TSLI G C+KG  E A  L   + L + D   P+  TYT +I   
Sbjct: 338 EEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLF--LKLIRSDNYKPNVHTYTAMISGY 395

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK----QK 580
            K  ++  A  L  +M  +GLVP   TY T+I  +C+ G      +L+E M ++      
Sbjct: 396 CKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNT 455

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
           C   YN +++ LC  G  EEA K+L    +   +AD  T  +L+     +     A    
Sbjct: 456 C--TYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFL 513

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
            +MF     PD+ L   +      +   ++++ L    ++ G + P  E +
Sbjct: 514 NKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLG-LAPTKETY 563


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 148/606 (24%), Positives = 270/606 (44%), Gaps = 85/606 (14%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI--------CNT-- 216
           M  +G+      ++ L+  + RAG++  A  VL MM++A V PN+          C T  
Sbjct: 195 MTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKG 254

Query: 217 ---------------------AIHVLVVG----NKLAKALRFLERMQLAGITPNVLTYNC 251
                                 +  LV G     + ++A      M   G  PN +TY  
Sbjct: 255 VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCT 314

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI       R K+ + L+ EM  +G   D V+Y  +M +L K+ +  EV+D +   ++D+
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                       +       ++EA++++ +M +    P+VVT+++V+NGF + G LD+A 
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 360 KMLQQMYHHGCKPNTVSYT-----------------------------------AFLNGL 384
           +  + M   G  PN V+Y                                    + +NGL
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             NGK  EA  +   +     + + + Y+ ++ GL + G +  A    +E++ +   P  
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N+ I  LC  GK   AK F+ E  N G   +   + ++I   C+KG+  +AL LL +
Sbjct: 555 VVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M +    P+ +TY T++  L   G VE+A  L+ +M+S G  P+ +T+R V+    Q  R
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674

Query: 565 VEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           ++ +L + E M++       T YN +++ LC  G   +A  +L ++L +    D  T + 
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNA 734

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L+  +        A+    +M ++N+ P++     +   L   G+  EA T+++  +E+ 
Sbjct: 735 LILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE-MEKS 793

Query: 683 HIQPKS 688
            ++P +
Sbjct: 794 GLEPNN 799



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 129/537 (24%), Positives = 235/537 (43%), Gaps = 49/537 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K       K  LR      +      ++ L+ A  +A  +  A  VL
Sbjct: 343 DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVL 402

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++ +++PN++  ++ I+  V    L KA  +   M+  GI PNV+TY  LI G+   
Sbjct: 403 LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462

Query: 260 H-----------------------------------RIKDAIKLIDEMPLKGCSPDKVSY 284
                                               +I++A+ L  +    G S D V+Y
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 285 YTVMGYLCKE----KRIKEVRDLMEK-MVNDS---NLFHD----QGRIEEAKELVNQMSQ 332
            T++  L K        K  ++LM++ M+ D+   N+F +     G+ +EAK  + +M  
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           MG  PD  TY  ++   CR GE  +A K+L +M     KPN ++Y   + GL   G   +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A+ ++N      ++P+++T+  V+    +  +L    D+   M+  G        N L+Q
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC  G    A   ++E L  G A + + F +LI G C+   L+ A +    M      P
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           +  T+ T++  L   GR+ EA  ++++M   GL P  +TY  +   + +     + ++L 
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY 822

Query: 573 EKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            +M+ K      + YN +I +    G + +A ++   + +      + T  +LV  +
Sbjct: 823 CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 247/546 (45%), Gaps = 41/546 (7%)

Query: 136 RYR-HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKL 192
           R+R  DP     +L    + +L + A  +LR         RP   +Y  L+ A S     
Sbjct: 67  RFRPADPASLNALLYSHCRLRLLRPAIALLR-------SSRPTTVAYNILLAALSDHA-- 117

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP-NVLTYNC 251
            +A  VL+ M K  V  + +  NT +  L    ++  A    +R    GI   +V+ +N 
Sbjct: 118 -HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRG--GGIHALDVIGWNT 174

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI GYC +     A+ + D M  +G   D V Y T++   C+                  
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRA----------------- 217

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 G+++ A+ +++ M + G  P+V TYT  +  +CR   +++A  + + M  +G  
Sbjct: 218 ------GQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            + V+ +A + GLC +G+  EA  +    ++    PN +TY  ++  L + G+  E   +
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           + EMV +G     V    L+  L ++GK D  K  ++  L+   + N V +T LI   C+
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
             +++EA  +L +M      P+ VT++++I+   K G +++ATE    M  +G+ P VVT
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y T+I  + +    +  L++   ML +  +  +   + ++  L   G +EEA  +     
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
            +    D      L++     G    A+K    + +RN++PD  +       L + GK +
Sbjct: 512 GSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFK 571

Query: 670 EADTLM 675
           EA + +
Sbjct: 572 EAKSFL 577


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 230/449 (51%), Gaps = 12/449 (2%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +V+ ++L    + +    A   L LM    I  + E  + L+    +  K++ A +V   
Sbjct: 148 LVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEE 207

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M K  +  +++  N  I++L    K  KA  F+  M++ G+ PNV+TYN +I GYC   +
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGK 267

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NL 313
            + A K+   M  K   PD  +Y + +  LCKE+RI+E   ++ K++           N 
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327

Query: 314 FHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             D    +G +++A    ++M   G +  V TY  +++       +++A+ M+++M   G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            +P+ V+Y   +NG C  G + +A  + +   E+   P   TY+ ++    +  ++SEA 
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           +  ++ +K+G  P  +  N LI   C  G +D A + ++E  N     + V F +L++G+
Sbjct: 448 EKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGY 507

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C++  +EEA  LLD+M      PD ++Y T+I   SK G +++A E+  +MLS G  PT+
Sbjct: 508 CRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTL 567

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           +TY  +I  Y ++G  +   +LL +M SK
Sbjct: 568 LTYNALIQGYSKIGEADHAEELLREMQSK 596



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 225/461 (48%), Gaps = 15/461 (3%)

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
            L ++ L+  YC   +  +A++ ++ M      P   +  +++  L K  +IK    + E
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 306 KMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
           +MV  +            N+   +G+ ++AK+ +  M   G  P+VVTY  V+NG+C  G
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           + + A K+ + M     KP+  +Y +F++ LC   +  EA  ++    E    PNA+TY+
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++ G   +G L +A     EM+ +G   +    NLLI +L  E +++ A+  ++E   K
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   +VV +   I G+C+ G+ ++ALSL D+M      P   TYT++ID   K  R+ EA
Sbjct: 387 GVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEA 446

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIEN 591
            E   K + +G++P ++ +  +I  +C  G ++   +LL++M + +       +N +++ 
Sbjct: 447 EEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQG 506

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            C    +EEA K+L ++     K D  + + L+  Y  +G    A +V   M +    P 
Sbjct: 507 YCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPT 566

Query: 652 LKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
           L     + +     G+++ A+ L+     +G I P    +L
Sbjct: 567 LLTYNALIQGYSKIGEADHAEELLREMQSKG-ITPDDSTYL 606



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 197/418 (47%), Gaps = 12/418 (2%)

Query: 127 FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY 186
           F Y    +   +   + + +M+ IL +    + AK  +  M   G++     ++ ++  Y
Sbjct: 203 FVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGY 262

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
              GK   A  +   M+   + P+    N+ I  L    ++ +A   L ++  +G+ PN 
Sbjct: 263 CLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNA 322

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           +TYN LI G C+   +  A    DEM  +G      +Y  ++  L  EKRI+E  D++++
Sbjct: 323 VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKE 382

Query: 307 MVN-----DSNLFHDQ-------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
           M       D   ++ Q       G  ++A  L ++M +    P V TYT++++ F +   
Sbjct: 383 MREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNR 442

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           + +A++  ++    G  P+ + + A ++G C NG    A +++   +     P+ +T++ 
Sbjct: 443 MSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNT 502

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           +M G  RE K+ EA  ++ EM ++G  P  +  N LI    + G M  A +   E L+ G
Sbjct: 503 LMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLG 562

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
               ++ + +LI+G+ + G+ + A  LL +M      PD  TY  +I+A+  N  + E
Sbjct: 563 FDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVE 620



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 138/289 (47%), Gaps = 23/289 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
             Y +++  L   K  + A+ +++ M  +G+E     ++  +  Y R G  + A+ +   
Sbjct: 358 FTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDE 417

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  + P +    + I V    N++++A    ++    G+ P+++ +N LI G+C    
Sbjct: 418 MVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGN 477

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           I  A +L+ EM      PD+V++ T+M   C+E+++                       E
Sbjct: 478 IDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKV-----------------------E 514

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EAK+L+++M + G  PD ++Y  +++G+ + G++  A ++  +M   G  P  ++Y A +
Sbjct: 515 EAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALI 574

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            G    G++  A E++   + +  TP+  TY  V+  ++    L E  D
Sbjct: 575 QGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVENDD 623


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/505 (23%), Positives = 249/505 (49%), Gaps = 14/505 (2%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           P+   M+L I S++K+   +  +  LM + G+     + +  + +     +  + + + S
Sbjct: 112 PLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFS 171

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            + ++ + P+  +   AI   V    L +A+  +  M+  G++P V  YN +I G C   
Sbjct: 172 EIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEK 231

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDS 311
           R+KDA KL DEM  +  +P++++Y T++   CK  +++E  ++ E+M         +  +
Sbjct: 232 RMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFN 291

Query: 312 NLFHDQGR---IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
           +L +   R   +EEA+ ++ +M   G +PD  TYT + +G  + G +D +  + ++    
Sbjct: 292 SLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRK 351

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G +    + +  LN LC  G   +A E++    E    P  + ++ +++G  + G +++A
Sbjct: 352 GVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKA 411

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
              + +M   G  P  V  N L++  C    M+ A+K +++ + KG   NV  + +LI G
Sbjct: 412 YTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDG 471

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           + +    +    +L++M      P+ ++Y  +I+ L K+  + EA  ++  M+ +G+VP 
Sbjct: 472 YGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPN 531

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILG 606
              Y  +I   C  G+++D  +  ++M++++   T   YN +I  LC  G + EA  +  
Sbjct: 532 AQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLAS 591

Query: 607 KVLRTASKADASTCHVLVESYLNKG 631
           ++ R     D  T + L+  Y + G
Sbjct: 592 EITRKGLSFDVITYNSLISGYSSAG 616



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 152/574 (26%), Positives = 262/574 (45%), Gaps = 28/574 (4%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNA 195
           R D  +Y   ++   K    + A  ++  M R G+   P  F Y +V     +  ++++A
Sbjct: 179 RPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVS--PGVFVYNVVIGGLCKEKRMKDA 236

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +   M    VAPN +  NT I       +L +A    ERM++  + P ++T+N L+ G
Sbjct: 237 EKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNG 296

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---- 311
            C    +++A ++++EM + G  PD+ +Y T+     K   +     L E+ V       
Sbjct: 297 LCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQIL 356

Query: 312 --------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   N    +G +E+A+E++ +  + G  P  V +  +VNG+C+VG++++A   ++
Sbjct: 357 DYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIE 416

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   G +PN V+Y + +   C      EA + I    E+   PN  TY+ ++ G  R  
Sbjct: 417 KMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSC 476

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
                  ++ EM KKG  P  +    LI  LC++  +  A+  + + +++G   N   + 
Sbjct: 477 LFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYN 536

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            LI G C  G L++A    D+M   +  P  VTY  +I+ L K G+V EA  L  ++  K
Sbjct: 537 MLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRK 596

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEA 601
           GL   V+TY ++I  Y   G V+  L+L E M     +     Y+++I   C    L   
Sbjct: 597 GLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLV 655

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
            KI  ++L+     D    + L+  Y+  G    A  +   M  + + PD    K     
Sbjct: 656 EKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPD----KMTYNC 711

Query: 662 LIL----EGKSEEADTLMLRFVERGHIQPKSEEH 691
           LIL    EG+  +   L+     RG I PK+E +
Sbjct: 712 LILGHFKEGRMHKVKNLVNDMKIRGLI-PKTETY 744



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 235/484 (48%), Gaps = 25/484 (5%)

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           +M+K  V P++   N  +  LV   +    L+    +  +G+ P+   Y   I+    L 
Sbjct: 137 LMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLG 196

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
            +K AI+L+  M   G SP    Y  V+G LCKEKR+K+                     
Sbjct: 197 DLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKD--------------------- 235

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
             A++L ++M      P+ +TY  +++G+C+VG+L++A  + ++M     +P  +++ + 
Sbjct: 236 --AEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSL 293

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           LNGLC      EA+ ++   E   + P+  TY+ +  G  + G +  +  +  E V+KG 
Sbjct: 294 LNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGV 353

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
                  ++L+ +LC+EG M+ A++ +++ L  G A   V F +++ G+CQ GD+ +A +
Sbjct: 354 QILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYT 413

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
            ++ M      P+ VTY +++    +   +EEA + + KM+ KG++P V TY T+I  Y 
Sbjct: 414 TIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYG 473

Query: 561 QVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           +    +   ++LE+M  K  +    +Y  +I  LC    + EA  ILG ++      +A 
Sbjct: 474 RSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQ 533

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
             ++L++     G    A++    M  R ++P L     +   L  +GK  EA+ L    
Sbjct: 534 IYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEI 593

Query: 679 VERG 682
             +G
Sbjct: 594 TRKG 597



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/582 (25%), Positives = 255/582 (43%), Gaps = 50/582 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
            VY +++  L K K  + A+++   M  R +      ++ L+  Y + G+L  A  +   
Sbjct: 218 FVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRER 277

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+   V P ++  N+ ++ L     + +A R LE M++ G  P+  TY  L  G+     
Sbjct: 278 MKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGN 337

Query: 262 IKDAIKLIDEMPLKG-------CS----------------------------PDKVSYYT 286
           +  +I L +E   KG       CS                            P  V + T
Sbjct: 338 VDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNT 397

Query: 287 VMGYLCKEKRIKEVRDLMEKM---------VNDSNL---FHDQGRIEEAKELVNQMSQMG 334
           ++   C+   I +    +EKM         V  ++L   F +   +EEA++ + +M + G
Sbjct: 398 IVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG 457

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            +P+V TY  +++G+ R    D+  ++L++M   G KPN +SY   +N LC +   LEA 
Sbjct: 458 VLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAE 517

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            ++         PNA  Y++++ G    GKL +A     EMV +   PT V  N+LI  L
Sbjct: 518 VILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGL 577

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C++GK+  A+    E   KG + +V+ + SLI G+   G++++AL L + M      P  
Sbjct: 578 CKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTL 637

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            TY  +I    K G V    ++  +ML   LVP  V Y  +IH Y + G V+    L   
Sbjct: 638 NTYHRLIAGCGKEGLVL-VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSA 696

Query: 575 MLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M ++  Q  +  YN +I      G + +   ++  +          T  +L+  +     
Sbjct: 697 MEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKD 756

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
              AY     MF     P + +C  +   L  EG+S +AD +
Sbjct: 757 FDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVI 798



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 199/465 (42%), Gaps = 50/465 (10%)

Query: 168 ARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
            R+G++      S L+ A  + G +  A  VL    +  +AP  +  NT ++       +
Sbjct: 349 VRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDI 408

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
            KA   +E+M+  G+ PN +TYN L+K +C++  +++A K I +M  KG  P+  +Y T+
Sbjct: 409 NKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTL 468

Query: 288 M---GYLCKEKRIKEVRDLMEKMVNDSNLFH---------DQGRIEEAKELVNQMSQMGC 335
           +   G  C   R  ++ + MEK     N+               I EA+ ++  M   G 
Sbjct: 469 IDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGV 528

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           +P+   Y  +++G C  G+L  A +   +M      P  V+Y   +NGLC  GK +EA  
Sbjct: 529 VPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAEN 588

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           + +    +  + + ITY+ ++ G    G + +A ++   M K G  PT    + LI    
Sbjct: 589 LASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCG 648

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           +EG +   +K  QE L      + V + +LI  + + GD+++A SL   M      PD +
Sbjct: 649 KEG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKM 707

Query: 516 TYTTIIDALSKNGRVEEATELM--MK---------------------------------M 540
           TY  +I    K GR+ +   L+  MK                                 M
Sbjct: 708 TYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREM 767

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK--CRT 583
              G  P+V     +I    + GR  D   +  +M  K K  CR 
Sbjct: 768 FENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKGKDDCRA 812



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 179/410 (43%), Gaps = 30/410 (7%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + + Y  +++   + K  + A++ ++ M  +G+    E ++ L+  Y R+        
Sbjct: 424 RPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQ 483

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M+K  + PN++     I+ L     + +A   L  M   G+ PN   YN LI G C
Sbjct: 484 ILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSC 543

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              ++KDA +  DEM  +   P  V+Y  ++  LCK                       +
Sbjct: 544 IAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCK-----------------------K 580

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G++ EA+ L +++++ G   DV+TY ++++G+   G + +A ++ + M   G KP   +Y
Sbjct: 581 GKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTY 640

Query: 378 TAFLNGLCHNGKSLEAR---EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
              + G    G  L  +   EM+  +      P+ + Y+ ++H     G + +AC +   
Sbjct: 641 HRLIAGCGKEGLVLVEKIYQEMLQMN----LVPDRVIYNALIHCYVEHGDVQKACSLHSA 696

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M  +G  P  +  N LI    +EG+M   K  + +   +G       +  LI G C+  D
Sbjct: 697 MEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKD 756

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
            + A     +M+     P       +I  L + GR  +A  +  +M  KG
Sbjct: 757 FDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806


>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 731

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 151/590 (25%), Positives = 265/590 (44%), Gaps = 64/590 (10%)

Query: 63  IRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADER 122
           ++ +++ E   +H L+  VC +I ++  W+  L+ +  + L S    Q+   L+    E 
Sbjct: 1   MKSMLMIETSNKH-LIESVCAII-VKGDWNNLLKPKTASTLTSTTIHQVILHLKQHRYEP 58

Query: 123 VAL-QFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP----- 176
             +  FF WA     Y H     + M+ +L+K +  + A++VL  MA+R I   P     
Sbjct: 59  FFIFHFFKWAQSIPHYTHSLHSSWSMIHMLTKHRHFKTAQQVLDKMAQREILSSPSVLTS 118

Query: 177 ------------EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
                          S++++ Y+++    +A+ V   M    + P+L  C   ++ L+  
Sbjct: 119 LVRIHDDPEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKD 178

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
              +   +  +RM   G+ PN+  YNCLI        ++ A  +++EM +KG  PD  +Y
Sbjct: 179 GITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTY 238

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            T++   CK                       +G   EA  + ++M + G   D+V+Y +
Sbjct: 239 NTLIALYCK-----------------------KGLHYEALSVQDKMEREGINLDIVSYNS 275

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++ GFC+ G++ +A +M  ++      PN V+YT  ++G C   +  EA  +      + 
Sbjct: 276 LIYGFCKEGKMREAMRMFGEI--KDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKG 333

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P  +TY+ ++  L  +G++ +A  ++ EM ++      V  N LI + C+ G ++ A 
Sbjct: 334 LYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSAL 393

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           KF  + L  G   N   + +LI GFC+  +LE A  LL  M      P+  TY+ I+D+ 
Sbjct: 394 KFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSY 453

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA 584
            K    +    L  + LSKG    +  YR +I R C++ R+E   KLL  M  K     +
Sbjct: 454 CKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKG---IS 510

Query: 585 YNQVIENLCSFGY------------LEEAGK----ILGKVLRTASKADAS 618
            + VI    +F Y            LEE  +    I  K+ R  S  DAS
Sbjct: 511 GDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRLMITVKIYRCFSALDAS 560



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 228/525 (43%), Gaps = 45/525 (8%)

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGI--TPNVLT----------YNCLIKGYCDLHRIK 263
           + IH+L        A + L++M    I  +P+VLT           N  +  +  +H  K
Sbjct: 83  SMIHMLTKHRHFKTAQQVLDKMAQREILSSPSVLTSLVRIHDDPEVNSHVLSWIVIHYAK 142

Query: 264 -----DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-------- 310
                DA+++ ++M L    P   +   +M  L K+     V  + ++MV D        
Sbjct: 143 SKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYV 202

Query: 311 -SNLFHDQGR---IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            + L H   +   +E A+ ++N+M   G +PD+ TY  ++  +C+ G   +A  +  +M 
Sbjct: 203 YNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKME 262

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G   + VSY + + G C  GK  EA  M    ++    PN +TY+ ++ G  +  +  
Sbjct: 263 REGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKDA--IPNHVTYTTLIDGYCKANEFE 320

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA  +   MV KG +P  V  N +++ LC +G++  A K + E   +    + V   +LI
Sbjct: 321 EALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLI 380

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
             +C+ GDL  AL     M      P++ TY  +I    K   +E A EL+  ML  G  
Sbjct: 381 NAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFS 440

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKI 604
           P   TY  ++  YC+    + +L L ++ LSK  C   + Y  +I  LC    +E A K+
Sbjct: 441 PNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKL 500

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
           L  +       D+     L  SY   G    A  +   M  R L+  +K+ +  S    L
Sbjct: 501 LYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRLMITVKIYRCFSA---L 557

Query: 665 EGKSEEADTLML-RFVERGHIQPKSEEHLQR--------QRVFLN 700
           +    +   +     VERG +   +   +Q+        QRVFL+
Sbjct: 558 DASQNKVSQMFWDHVVERGLMSRNTMYKIQQMPFISSGYQRVFLH 602


>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 139/561 (24%), Positives = 259/561 (46%), Gaps = 17/561 (3%)

Query: 106 LKPRQ--ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
           L P Q  +C ++  Q     ALQ F WA    ++ H    Y  ++  L   +     K++
Sbjct: 34  LPPTQDHLCQLILDQKTSSEALQTFRWASTFSKFTHSQSTYRTLIHKLCIFRRFDTVKQL 93

Query: 164 LRLMARR-GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           L  M    G     + F  ++   SRAG  R  + VL +  K    P+L I N+ + VLV
Sbjct: 94  LDEMPTSIGANPGEDIFITIVRGLSRAGMTRRVITVLDLAYKFHGTPSLKIFNSILDVLV 153

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
             +       + + M  +G+  +  T+  L+KG C  +RI +  KL+  +   G +P+ V
Sbjct: 154 KEDIDMAREFYRKSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNTV 213

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL--------FHDQGRIEEAKELVNQMSQMG 334
            Y T++  LC+  ++   R LM +MV+ + +        ++ +  + +A  L+ +   + 
Sbjct: 214 IYNTLLHALCRNGKVGRARSLMNEMVDPNEVTFNILISSYYKEENLVQALVLLEKCFALS 273

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            +PDVVT T VV   C  G + +A ++L+++   G   + V+Y   + G C  GK     
Sbjct: 274 LVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGL 333

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
             +   E + + PN  TY+++++G      L  A D+  +M   G     V  + +I+ L
Sbjct: 334 HFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGL 393

Query: 455 CREGKMDGAKKFMQ--ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           C EG+++     ++  E   +G   ++  + S+I G  ++   +EA   L  M   K  P
Sbjct: 394 CSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKM--GKLFP 451

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
             V  +  I    K G +E+A  +  KM+ +G +P+++ Y +++H + Q G + + ++L+
Sbjct: 452 RAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELI 511

Query: 573 EKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
            +M+S       + +N +I   C  G +E A K +  +       +  T   L++    K
Sbjct: 512 NEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRK 571

Query: 631 GIPLLAYKVACRMFNRNLIPD 651
           G    A +V   M  + ++PD
Sbjct: 572 GDIQKALQVFLEMVEKGILPD 592


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 148/606 (24%), Positives = 270/606 (44%), Gaps = 85/606 (14%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI--------CNT-- 216
           M  +G+      ++ L+  + RAG++  A  VL MM++A V PN+          C T  
Sbjct: 195 MTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKG 254

Query: 217 ---------------------AIHVLVVG----NKLAKALRFLERMQLAGITPNVLTYNC 251
                                 +  LV G     + ++A      M   G  PN +TY  
Sbjct: 255 VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCT 314

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI       R K+ + L+ EM  +G   D V+Y  +M +L K+ +  EV+D +   ++D+
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                       +       ++EA++++ +M +    P+VVT+++V+NGF + G LD+A 
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 360 KMLQQMYHHGCKPNTVSYT-----------------------------------AFLNGL 384
           +  + M   G  PN V+Y                                    + +NGL
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             NGK  EA  +   +     + + + Y+ ++ GL + G +  A    +E++ +   P  
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N+ I  LC  GK   AK F+ E  N G   +   + ++I   C+KG+  +AL LL +
Sbjct: 555 VVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M +    P+ +TY T++  L   G VE+A  L+ +M+S G  P+ +T+R V+    Q  R
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674

Query: 565 VEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           ++ +L + E M++       T YN +++ LC  G   +A  +L ++L +    D  T + 
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNA 734

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L+  +        A+    +M ++N+ P++     +   L   G+  EA T+++  +E+ 
Sbjct: 735 LILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE-MEKS 793

Query: 683 HIQPKS 688
            ++P +
Sbjct: 794 GLEPNN 799



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 129/537 (24%), Positives = 235/537 (43%), Gaps = 49/537 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K       K  LR      +      ++ L+ A  +A  +  A  VL
Sbjct: 343 DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVL 402

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++ +++PN++  ++ I+  V    L KA  +   M+  GI PNV+TY  LI G+   
Sbjct: 403 LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462

Query: 260 H-----------------------------------RIKDAIKLIDEMPLKGCSPDKVSY 284
                                               +I++A+ L  +    G S D V+Y
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 285 YTVMGYLCKE----KRIKEVRDLMEK-MVNDS---NLFHD----QGRIEEAKELVNQMSQ 332
            T++  L K        K  ++LM++ M+ D+   N+F +     G+ +EAK  + +M  
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           MG  PD  TY  ++   CR GE  +A K+L +M     KPN ++Y   + GL   G   +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A+ ++N      ++P+++T+  V+    +  +L    D+   M+  G        N L+Q
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC  G    A   ++E L  G A + + F +LI G C+   L+ A +    M      P
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           +  T+ T++  L   GR+ EA  ++++M   GL P  +TY  +   + +     + ++L 
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY 822

Query: 573 EKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            +M+ K      + YN +I +    G + +A ++   + +      + T  +LV  +
Sbjct: 823 CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 252/550 (45%), Gaps = 49/550 (8%)

Query: 136 RYR-HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKL 192
           R+R  DP     +L    + +L + A  +LR         RP   +Y  L+ A S     
Sbjct: 67  RFRPADPASLNALLYSHCRLRLLRPAIALLR-------SSRPTTVAYNILLAALSDHA-- 117

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP-NVLTYNC 251
            +A  VL+ M K  V  + +  NT +  L    ++  A    +R    GI   +V+ +N 
Sbjct: 118 -HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRG--GGIHALDVIGWNT 174

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI GYC +     A+ + D M  +G   D V Y T++   C+                  
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR------------------ 216

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 G+++ A+ +++ M + G  P+V TYT  +  +CR   +++A  + + M  +G  
Sbjct: 217 -----AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            + V+ +A + GLC +G+  EA  +    ++    PN +TY  ++  L + G+  E   +
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           + EMV +G     V    L+  L ++GK D  K  ++  L+   + N V +T LI   C+
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
             +++EA  +L +M      P+ VT++++I+   K G +++ATE    M  +G+ P VVT
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y T+I  + +    +  L++   ML +  +  +   + ++  L   G +EEA  +     
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMAL----F 507

Query: 610 RTASKADASTCHV----LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
           + AS +  S  HV    L++     G    A+K    + +RN++PD  +       L + 
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCML 567

Query: 666 GKSEEADTLM 675
           GK +EA + +
Sbjct: 568 GKFKEAKSFL 577



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 163/360 (45%), Gaps = 12/360 (3%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GK + A   L+ M+   + P+    NT I       + AKAL+ L  M+++ I PN++TY
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N L+ G      ++ A  L++EM   G SP  +++  V+    + +R+  + D+ E M+N
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687

Query: 310 -----DSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                D  +++         G   +A  ++ +M   G  PD +T+ A++ G C+   LD 
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDN 747

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A     QM H    PN  ++   L GL   G+  EA  ++   E+    PN +TY ++  
Sbjct: 748 AFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILAT 807

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  ++    EA  +  EMV KGF P     N LI    + G M  AK+  ++   +G   
Sbjct: 808 GHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHP 867

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
               +  L+ G+ +  +  E    L DM      P   T + I  A SK G   +A  L+
Sbjct: 868 TSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 182/412 (44%), Gaps = 24/412 (5%)

Query: 44  DDHFMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLL 103
           D  F   D    ++  +E + R +L +    +  +  +C L + + A S     E+RN+ 
Sbjct: 527 DGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKS--FLTEMRNM- 583

Query: 104 RSLKPRQ------ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
             LKP Q      I +  R + +   AL+  +   +    + + I Y  ++  L  T   
Sbjct: 584 -GLKPDQSTYNTMIVSHCR-KGETAKALKLLHEM-KMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           + AK +L  M   G          ++ A S++ +L   + +   M  A +  ++ + NT 
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           + VL       KA   LE M  +GI P+ +T+N LI G+C    + +A     +M  +  
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFHD--------QGRIEEAKE 325
           SP+  ++ T++G L    RI E   ++ +M    +  +NL +D        Q    EA  
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMR 820

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L  +M   G +P V TY A+++ F + G + QAK++ + M   G  P + +Y   ++G  
Sbjct: 821 LYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWS 880

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
                 E ++ +   +E+ ++P+  T S +     + G   +A  +++ + +
Sbjct: 881 RIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 144/584 (24%), Positives = 253/584 (43%), Gaps = 53/584 (9%)

Query: 72  EFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWA 131
           E    +V ++C ++E   AW P  E  L  L    +P  +  VLR   D   A+++F W 
Sbjct: 30  EGNRQIVNDICNVLE-TGAWGPSAENALSALNFKPQPEFVIGVLRRLKDVNRAIEYFRWY 88

Query: 132 DRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGK 191
           +R+    H P  Y  +L ++++ +      ++L  M+  G          ++++  +A K
Sbjct: 89  ERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANK 148

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           LR    V+  M+K    P      T I      N     L   ++MQ  G  P V  +  
Sbjct: 149 LREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTT 208

Query: 252 LIKGYCDLHRIKDAIKLIDEMP-----------------------------------LKG 276
           LI+G+    R+  A+ L+DEM                                      G
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAK 324
             PD+V+Y +++G LCK  R+ E  ++ E +  +  +            +   G+ +EA 
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L+ +    G IP V+ Y  ++    ++G++D+A ++ ++M      PN  +Y   ++ L
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDML 387

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  GK   A E+ ++ ++    PN  T ++++  L +  KL EAC +  +M  K   P  
Sbjct: 388 CRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDE 447

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           +    LI  L + G++D A K  ++ L+  C  N + +TSLI+ F   G  E+   +  D
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      PD     T +D + K G  E+   +  ++ S+  VP   +Y  +IH   + G 
Sbjct: 508 MVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGF 567

Query: 565 VEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKIL 605
             +  +L   M  +Q C     AYN VI+  C  G + +A ++L
Sbjct: 568 ANETYELFYSM-KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 230/477 (48%), Gaps = 17/477 (3%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           A++ ++    + GK+  A+ V   M+K A APNL   N  I +L    KL  A    + M
Sbjct: 345 AYNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKLDCAFELRDSM 403

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           Q AG+ PNV T N ++   C   ++ +A  + ++M  K C+PD++++ +++  L K  R+
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRV 463

Query: 298 KEVRDLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            +   + EKM+ DS+              F + GR E+  ++   M    C PD+     
Sbjct: 464 DDAYKIYEKML-DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNT 522

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
            ++   + GE ++ + M +++      P+  SY+  ++GL   G + E  E+  + +E+ 
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
              +   Y++V+ G  + GK+++A  ++ EM  KGF PT V    +I  L +  ++D A 
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
              +E  +K   +NVV ++SLI GF + G ++EA  +L+++      P+  T+ +++DAL
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDAL 702

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCR 582
            K   + EA      M      P  VTY  +I+  C+V +        ++M  +  +   
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
            +Y  +I  L   G + EAG +  +        D++  + ++E   N    + A+ +
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 224/529 (42%), Gaps = 63/529 (11%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           I Y  +L  L K      A RV   M +   +  P   +Y  L+    RAGKL  A  + 
Sbjct: 344 IAYNCILTCLRKMGKVDEALRVFEEMKK---DAAPNLSTYNILIDMLCRAGKLDCAFELR 400

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             MQKA + PN+   N  +  L    KL +A    E+M     TP+ +T+  LI G   +
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKV 460

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R+ DA K+ ++M    C  + + Y +++       R ++   + + MVN +        
Sbjct: 461 GRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLL 520

Query: 312 NLFHD---------------------------------------QGRIEEAKELVNQMSQ 332
           N + D                                        G   E  EL   M +
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            GC+ D   Y  V++GFC+ G++++A ++L++M   G +P  V+Y + ++GL    +  E
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A  +   ++ +    N + YS ++ G  + G++ EA  ++ E+++KG  P     N L+ 
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLD 700

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           +L +  +++ A    Q      C  N V +  LI G C+     +A     +M      P
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
            T++YTT+I  L+K G + EA  L  +  + G VP    Y  +I       R  D   L 
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820

Query: 573 EKM------LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
           E+       +  + C    + + +N C    LE+A  I+G VLR   KA
Sbjct: 821 EETRRRGLHIHNKTCVVLLDTLHKNDC----LEQAA-IVGAVLRETGKA 864



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 142/302 (47%), Gaps = 1/302 (0%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +++ +MS  G  P V T   +V    +  +L +   ++Q M     +P   +YT  +   
Sbjct: 119 QILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAF 178

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
                S     +    +E  + P    ++ ++ G  +EG++  A  ++ EM         
Sbjct: 179 SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N+ I S  + GK+D A KF  E    G   + V +TS+I   C+   L+EA+ + + 
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           +   ++ P T  Y T+I      G+ +EA  L+ +  +KG +P+V+ Y  ++    ++G+
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358

Query: 565 VEDLLKLLEKMLSKQKCR-TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           V++ L++ E+M        + YN +I+ LC  G L+ A ++   + +     +  T +++
Sbjct: 359 VDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIM 418

Query: 624 VE 625
           V+
Sbjct: 419 VD 420



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/292 (19%), Positives = 124/292 (42%), Gaps = 23/292 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y ++++   K      A ++L  M  +G E     +  ++   ++  +L  A  + 
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
              +   +  N++I ++ I       ++ +A   LE +   G+TPNV T+N L+      
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKA 705

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             I +A+     M    C+P++V+Y  ++  LCK ++            N + +F     
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF-----------NKAFVFW---- 750

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                    +M + G  P  ++YT +++G  + G + +A  +  +   +G  P++  Y A
Sbjct: 751 --------QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            + GL +  ++++A  +   +       +  T  V++  L +   L +A  V
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIV 854


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 216/454 (47%), Gaps = 18/454 (3%)

Query: 141 PIVYYMMLEILSKTKL--CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           P VY + + I S   L     A   L  + + G +     F+ L+      GK+  A+++
Sbjct: 103 PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL 162

Query: 199 LSMMQKAAVAPNLLICNTAIHVLV-VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
              M      PN++   T I+ L  VGN  A A+R L  M+     PNV+ ++ LI   C
Sbjct: 163 FDKMIGEGFQPNVVTYGTLINGLCKVGNTSA-AIRLLRSMEQGNCQPNVVVFSTLIDSLC 221

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD- 316
              ++ +A  +  EM  KG SP+ V+Y +++  LCK    K V  LM +MV DS +  D 
Sbjct: 222 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV-DSKIMPDV 280

Query: 317 ------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                       +G + EA ++V+ M   G  P+VVTY A+++G C   E+D A K+   
Sbjct: 281 FTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDT 340

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M H  C  N +SY   +NG C      +A  +      +  TPN +TY+ ++HGL   G+
Sbjct: 341 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 400

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L +A  +  EMV +G  P  V    L   LC+   +D A   ++         ++  +T+
Sbjct: 401 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           ++ G C+ G+LE+A  L  ++      P+  TY  +I  L K G + EA++L  +M   G
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
             P   TY  +   + +       ++LLE+ML++
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 227/471 (48%), Gaps = 26/471 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ + ++       + +   M    + P++      I+ L   N++  A   L ++ 
Sbjct: 73  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+  T+  LI+G C   +I +A+ L D+M  +G  P+ V+Y T++  LCK     
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK----- 187

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                              G    A  L+  M Q  C P+VV ++ +++  C+  ++ +A
Sbjct: 188 ------------------VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +  +M   G  PN V+Y + ++GLC   +      ++N   +    P+  T + V+  
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L +EG ++EA DVV  M+ +G  P  V  N L+   C   ++D A K     ++K C  N
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVAN 349

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           V+++ +LI G+C+   +++A+ L ++M   +  P+TVTY T+I  L   GR+++A  L  
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFG 596
           +M+++G +P +VTYRT+    C+   ++  + LL+ +           Y  +++ +C  G
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 469

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
            LE+A  +   +     + +  T ++++     +G+   A K+   M N+N
Sbjct: 470 ELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM-NKN 519



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 196/422 (46%), Gaps = 12/422 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   G +     +  L+    + G    A+ +L  M++    PN+++ +T I  L    +
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +A      M   GI+PN++TYN LI G C L   K    L++EM      PD  +  T
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDS--------NLFHD----QGRIEEAKELVNQMSQMG 334
           V+  LCKE  + E  D+++ M++          N   D    +  ++ A ++ + M    
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C+ +V++Y  ++NG+C++  +D+A  + ++M      PNTV+Y   ++GLCH G+  +A 
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            + +        P+ +TY  +   L +   L +A  +++ +    + P       ++  +
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CR G+++ A+       +KG   NV  +  +I G C++G L EA  L  +M      P+ 
Sbjct: 466 CRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            TY  I     +N       EL+ +ML++G    V T   ++      G  + + ++L K
Sbjct: 526 CTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 585

Query: 575 ML 576
           ++
Sbjct: 586 IV 587



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 2/279 (0%)

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           S+  F +   H     EA    N    +   P+ + ++ ++  + +    S    + R+M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              G  P    + ++I SLC   ++D A   + + L  G   +   FT+LIRG C +G +
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            EAL L D M      P+ VTY T+I+ L K G    A  L+  M      P VV + T+
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I   C+  +V +   +  +M++K        YN +I  LC     +    ++ +++ +  
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
             D  T + +V++   +G+   A+ V   M +R + P++
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNV 315



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 80/169 (47%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  + + L K +    A  +L+ +     +   + ++ ++    RAG+L +A  + 
Sbjct: 419 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 478

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S +    + PN+   N  IH L     LA+A +    M   G +PN  TYN + +G+   
Sbjct: 479 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 538

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           +     I+L++EM  +G S D  +   ++G L  +   + V+ ++ K+V
Sbjct: 539 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKIV 587


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/624 (23%), Positives = 270/624 (43%), Gaps = 91/624 (14%)

Query: 120 DERVALQFFYWAD-RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
           D  +AL+FF WA  R +    D + +  +L++L+  ++    + VL  M  + ++   EA
Sbjct: 69  DAELALKFFDWASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREA 128

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAA-VAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           FS L++AY  +G L  A+ +   +++     P ++  N+ ++ LV   K+  AL+  ++M
Sbjct: 129 FSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKM 188

Query: 238 QLA---------------------------------------GITPNVLTYNCLIKGYCD 258
                                                     G  P+V+ YN +I GYC 
Sbjct: 189 LQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCK 248

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNL 313
              ++ A + + E+ +KG  P   +Y  ++   CK    + V  L+ +M       +  +
Sbjct: 249 KGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKV 308

Query: 314 FHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
           F++        G + +A E + +M++MGC PD+ TY  ++N  C+ G + +A + L++  
Sbjct: 309 FNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAK 368

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  PN  SYT  ++  C  G  ++A  M+    E    P+ ++Y   +HG+   G++ 
Sbjct: 369 ERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEID 428

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLC------------------------------- 455
            A  V  +M++KG FP     N+L+  LC                               
Sbjct: 429 VALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLM 488

Query: 456 ----REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
               R G++D A K  +  + KG    +V + ++I+GFC+ G + +ALS L+ M      
Sbjct: 489 DGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHA 548

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD  TY+T+ID   K   +  A ++  +M+     P V+TY ++I+ +C+   +    K+
Sbjct: 549 PDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKV 608

Query: 572 LEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
              M S         Y  ++      G  E+A  I   +L      + +T H L+    N
Sbjct: 609 FRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTN 668

Query: 630 KGI-PLLAYKVACRMFNRNLIPDL 652
               P+L  +       R+LI D 
Sbjct: 669 TATSPVLIEEKDSMENERSLILDF 692



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 135/541 (24%), Positives = 233/541 (43%), Gaps = 74/541 (13%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y M+++   K    Q A R L+ +  +G+    E +  L+  + +AG+      +L+ 
Sbjct: 237 VFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTE 296

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    +  N+ + N  I        + KA   + RM   G  P++ TYN +I   C   R
Sbjct: 297 MAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGR 356

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           IK+A + +++   +G  P+K SY  +M   CK                       QG   
Sbjct: 357 IKEADEFLEKAKERGLLPNKFSYTPLMHAYCK-----------------------QGDYV 393

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +A  ++ +++++G  PD+V+Y A ++G    GE+D A  + ++M   G  P+   Y   +
Sbjct: 394 KAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLM 453

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +GLC NG+    + +++   +    P+   ++ +M G  R G+L EA  + + +++KG  
Sbjct: 454 SGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVD 513

Query: 442 PTPVEINLLIQSLCREGKM--------------------------DG---------AKKF 466
           P  V  N +I+  C+ GKM                          DG         A K 
Sbjct: 514 PGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKM 573

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
             + +      NV+ +TSLI GFC+K D+  A  +   M      P+ VTYTT++    K
Sbjct: 574 FGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFK 633

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR----VED----------LLKLL 572
            G+ E+AT +   ML  G  P   T+  +I+           +E+          +L   
Sbjct: 634 AGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFF 693

Query: 573 EKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
             MLS+   +   AYN VI  LC  G ++ A  +L K+L      D+     ++    +K
Sbjct: 694 TMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHK 753

Query: 631 G 631
           G
Sbjct: 754 G 754



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 212/486 (43%), Gaps = 47/486 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  M+    K    + A   L     RG+   P  FSY  LM AY + G    A  
Sbjct: 340 DITTYNTMINFSCKGGRIKEADEFLEKAKERGL--LPNKFSYTPLMHAYCKQGDYVKAAG 397

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  + +    P+L+     IH +VV  ++  AL   E+M   G+ P+   YN L+ G C
Sbjct: 398 MLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLC 457

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK----EKRIKEVRDLMEKMVNDSNL 313
              R      L+ EM  +   PD   + T+M    +    ++ IK  + ++ K V+   +
Sbjct: 458 KNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIV 517

Query: 314 FHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            ++         G++ +A   +N+M  +   PD  TY+ V++G+ +  ++  A KM  QM
Sbjct: 518 GYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQM 577

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
             H  KPN ++YT+ +NG C     + A ++    +     PN +TY+ ++ G  + GK 
Sbjct: 578 MKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKP 637

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A  +   M+  G  P     + LI  L                       N      L
Sbjct: 638 EKATSIFELMLMNGCPPNDATFHYLINGL----------------------TNTATSPVL 675

Query: 486 IRGFCQKGDLEEALSLLDDMY--LCKKDPDTV--TYTTIIDALSKNGRVEEATELMMKML 541
           I    +K  +E   SL+ D +  +  +  D V   Y ++I  L K+G V+ A  L+ KML
Sbjct: 676 IE---EKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKML 732

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLE 599
           +KG +   V +  ++H  C  G+ ++   ++   L+K + +TA  Y+  ++     G L 
Sbjct: 733 TKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLS 792

Query: 600 EAGKIL 605
           EA  IL
Sbjct: 793 EASVIL 798



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 178/403 (44%), Gaps = 46/403 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  +Y +++  L K       K +L  M  R ++     F+ LM  + R G+L  A+ + 
Sbjct: 445 DAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIF 504

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            ++ +  V P ++  N  I       K+  AL  L +M+     P+  TY+ +I GY   
Sbjct: 505 KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQ 564

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           H +  A+K+  +M      P+ ++Y +++   CK+       D++               
Sbjct: 565 HDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKA------DMI--------------- 603

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
              A+++   M     +P+VVTYT +V GF + G+ ++A  + + M  +GC PN  ++  
Sbjct: 604 --RAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHY 661

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +NGL +   S    E  ++ E E                      S   D    M+ +G
Sbjct: 662 LINGLTNTATSPVLIEEKDSMENER---------------------SLILDFFTMMLSEG 700

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           +       N +I  LC+ G +D A+  + + L KG  ++ V FT+++ G C KG  +E  
Sbjct: 701 WDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWR 760

Query: 500 SLLDDMYLCKKDPDT-VTYTTIIDALSKNGRVEEATELMMKML 541
           +++    L K +  T V Y+  +D     GR+ EA+ ++  ++
Sbjct: 761 NII-SCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTLI 802



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 94/245 (38%), Gaps = 39/245 (15%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           Q D   AL+ F    +  +++ + I Y  ++    K      A++V R M  +  +  P 
Sbjct: 564 QHDMSSALKMFGQMMKH-KFKPNVITYTSLINGFCKKADMIRAEKVFRGM--KSFDLVPN 620

Query: 178 AFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG----------- 224
             +Y  L+  + +AGK   A  +  +M      PN    +   H L+ G           
Sbjct: 621 VVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPN----DATFHYLINGLTNTATSPVLI 676

Query: 225 -------NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
                  N+ +  L F   M   G    +  YN +I   C    +  A  L+ +M  KG 
Sbjct: 677 EEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGF 736

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKE 325
             D V +  ++  LC + + KE R+++   +N   L            +  QGR+ EA  
Sbjct: 737 LIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASV 796

Query: 326 LVNQM 330
           ++  +
Sbjct: 797 ILQTL 801


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 162/632 (25%), Positives = 288/632 (45%), Gaps = 49/632 (7%)

Query: 77  LVREVCRLI--------ELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADER---VAL 125
           +VR +C L+         +R    PKL   L +   SL   Q   V+ S ADE    VAL
Sbjct: 62  VVRTICSLVCQSYYQQTHVRFT-PPKLHLPLDS--ESLTHDQAITVVASLADEAGSMVAL 118

Query: 126 QFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA 185
            F YWA    ++RH     +M L I+S T L          +  + +E   E    +++ 
Sbjct: 119 SFLYWAIGFPKFRH-----FMRLYIVSATAL----------IGNKNLERANEVMQCMVMN 163

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
           ++  GKL+ A+ ++  MQ   +  +    N  + V V    +  A      M   G++P+
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
            +++  ++   C++ R+ +A K ++ M  +G   D  +   ++   C++  +  V     
Sbjct: 224 CVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW 283

Query: 306 KMV---------NDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
           KMV         N + L +    QG I++A EL+ +M + G  P+V T+T +++G C+ G
Sbjct: 284 KMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKG 343

Query: 354 ELDQAKKM-LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
             ++A ++ L+ +   G KPN  +YTA +NG C   K   A  +++  +E+   PN  TY
Sbjct: 344 WTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTY 403

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           + ++ G  + G    A +++  M K+GF P     N +I  LC++G +D A + + +   
Sbjct: 404 TTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSV 463

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            G   + V +T L+   C++ D   +L   + M      PD  +YTT+I    +  +++E
Sbjct: 464 HGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKE 523

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVI 589
           +  L  + +S GL+PT  TY ++I  YC+ G     +KL ++M S   C      Y  +I
Sbjct: 524 SERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM-SNHGCAPDSITYGALI 582

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
             LC    L++A  +   ++         T   L   Y  K     A  V  R+  R  I
Sbjct: 583 SGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWI 642

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
              +    +  +L  EGK + A     + +++
Sbjct: 643 ---RTVNTLVRKLCSEGKLDMAALFFHKLLDK 671



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 193/403 (47%), Gaps = 12/403 (2%)

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           L   K ++   ++M+ MV +   F + G+++EA  +V +M   G +    T   V++   
Sbjct: 144 LIGNKNLERANEVMQCMVMN---FAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAV 200

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
            +G ++ A+ M  +M   G  P+ VS+   +   C+ G+ LEA + +N   E  +  +  
Sbjct: 201 GMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNA 260

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           T ++++    ++G ++       +MV+ G  P  +    LI  LC++G +  A + ++E 
Sbjct: 261 TCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEM 320

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD---PDTVTYTTIIDALSKN 527
           + +G   NV   T+LI G C+KG  E+A  L   + L + D   P+  TYT +I+   K 
Sbjct: 321 VRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLF--LKLVRSDGYKPNVHTYTAMINGYCKE 378

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG---RVEDLLKLLEKMLSKQKCRTA 584
            ++  A  L+ +M  +GLVP   TY T+I  +C+VG   R  +L+ L+ K        T 
Sbjct: 379 DKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYT- 437

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN +I+ LC  G L+EA ++L KV     +AD  T  +L+  +  +     +     +M 
Sbjct: 438 YNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
                PD+     +      + + +E++ L    V  G I  K
Sbjct: 498 KVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTK 540



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 169/363 (46%), Gaps = 26/363 (7%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A + F    R   Y+ +   Y  M+    K      A+ +L  M  +G+      ++ L+
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             + + G    A  ++ +M K   +PN+   N  I  L     L +A R L ++ + G+ 
Sbjct: 408 DGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQ 467

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
            + +TY  L+  +C       ++   ++M   G +PD  SY T++   C++K++KE   L
Sbjct: 468 ADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERL 527

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            E+ V+                       +G IP   TYT+++ G+CR G    A K+ Q
Sbjct: 528 FEEAVS-----------------------LGLIPTKKTYTSMICGYCRYGNTSLAVKLFQ 564

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M +HGC P++++Y A ++GLC   K  +AR + +   ++  +P  +T   + +   ++ 
Sbjct: 565 RMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKD 624

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
             S A +V+  + K+ +  T   +N L++ LC EGK+D A  F  + L+K   VN V   
Sbjct: 625 DSSTAINVLDRLEKRQWIRT---VNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLL 681

Query: 484 SLI 486
             +
Sbjct: 682 GFM 684



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 9/249 (3%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  +++ L K      A R+L  ++  G++     ++ LM  + R      ++   + M
Sbjct: 437 TYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM 496

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            K    P++    T I       ++ ++ R  E     G+ P   TY  +I GYC     
Sbjct: 497 LKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNT 556

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------NL 313
             A+KL   M   GC+PD ++Y  ++  LCKE ++ + R+L + M++            L
Sbjct: 557 SLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTL 616

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
            ++  + +++   +N + ++     + T   +V   C  G+LD A     ++       N
Sbjct: 617 AYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVN 676

Query: 374 TVSYTAFLN 382
            V+   F+N
Sbjct: 677 RVTLLGFMN 685


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 239/502 (47%), Gaps = 35/502 (6%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           K   A  V + +      P +   NT +  +    +    +   +RM L G+ P+ +T N
Sbjct: 72  KRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLN 131

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI  YC+L+++   + ++ EM  +G SP+ V++ +++  LC   RI E   L+ KMV  
Sbjct: 132 ILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMV-- 189

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG- 369
                                +MG  P+VVTY  ++NG C  G    A K+ ++M +   
Sbjct: 190 ---------------------RMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNG 228

Query: 370 -----CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
                 KPN V Y   ++ LC +G   + +E+    +    +P+ + YS ++HG+   G+
Sbjct: 229 GFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGR 288

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
              A  +  EMV +G  P  V  N+LI +LC+ GKM+ A   ++  + +G + +   + +
Sbjct: 289 WEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNT 348

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI GFC +G +++A  L   M     + D V+Y  +I+   K+GR+ EA +L  +M+ K 
Sbjct: 349 LIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKE 408

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----LSKQKCRTAYNQVIENLCSFGYLEE 600
           ++PTV+TY T++    + G+V D   L  +M    L+ + C   YN +++ LC   +L E
Sbjct: 409 IMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESC--TYNILLDGLCKNNHLSE 466

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           A ++   +     +      + L++         +A ++  R+ +  L P++     +  
Sbjct: 467 AMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIH 526

Query: 661 RLILEGKSEEADTLMLRFVERG 682
            L   G+ E A  L L   E+G
Sbjct: 527 GLCKSGQLENAKDLFLGMEEKG 548



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 132/526 (25%), Positives = 237/526 (45%), Gaps = 20/526 (3%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +F+ L+ A ++  +  + + +   M    +AP+ +  N  I+     NK+   L  L  M
Sbjct: 94  SFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEM 153

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G +PN +T+  L+KG C   RI +A  L+ +M   G  P+ V+Y T++  LC     
Sbjct: 154 LRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNT 213

Query: 298 KEVRDLMEKMVNDSNLFH------------------DQGRIEEAKELVNQMSQMGCIPDV 339
                L E+M+N +  F                     G I++ KEL  +M   G  PDV
Sbjct: 214 MLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDV 273

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           V Y+++++G C  G  + AK +  +M   G  PN V++   ++ LC  GK  EA  ++  
Sbjct: 274 VAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKL 333

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             +   +P+  TY+ ++ G   EG++ +A D+   M  KG     V  N+LI   C+ G+
Sbjct: 334 MIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGR 393

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           M  AKK  +E + K     V+ + +L+ G  ++G + +A +L  +M +    P++ TY  
Sbjct: 394 MVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNI 453

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK- 578
           ++D L KN  + EA EL   + +    P++  +  +I   C+  ++E   +L  ++  + 
Sbjct: 454 LLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEG 513

Query: 579 -QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
            +     Y  +I  LC  G LE A  +   +       +  T + L+  +          
Sbjct: 514 LEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVV 573

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           ++   M  ++  PD      V + L  + K  E   L+  F  +G 
Sbjct: 574 ELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQGQ 619



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 211/435 (48%), Gaps = 20/435 (4%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           VL  M RRG       F+ L+       ++  A  +L  M +    PN++   T ++ L 
Sbjct: 149 VLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLC 208

Query: 223 VGNKLAKALRFLERMQLAG-------ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
           +      A++  E M L G       I PN++ Y  +I   C    I    +L  EM  +
Sbjct: 209 MTGNTMLAVKLHEEM-LNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGR 267

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NLFHDQ----GRIEEA 323
           G SPD V+Y +++  +C   R +  + L  +MV++         N+  D     G++EEA
Sbjct: 268 GISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEA 327

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
             L+  M Q G  PD  TY  +++GFC  G +D A+ +   M   G + + VSY   +NG
Sbjct: 328 NHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLING 387

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
            C +G+ +EA+++      +   P  ITY+ ++ GL REGK+ +A ++  EM      P 
Sbjct: 388 YCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPE 447

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
               N+L+  LC+   +  A +      N     ++  F  LI G C+   +E A  L +
Sbjct: 448 SCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFN 507

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
            +     +P+ +TYT +I  L K+G++E A +L + M  KG  P +VT+ T++  +CQ  
Sbjct: 508 RLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQND 567

Query: 564 RVEDLLKLLEKMLSK 578
            ++ +++LL++M  K
Sbjct: 568 EMQKVVELLQEMAEK 582



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 187/403 (46%), Gaps = 23/403 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++ L K  L    K +   M  RGI     A+S ++      G+   A  + + 
Sbjct: 239 VCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNE 298

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    V PN++  N  I  L    K+ +A   L+ M   G +P+  TYN LI G+C   R
Sbjct: 299 MVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGR 358

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           I DA  L   M  KG   D VSY  ++   CK                        GR+ 
Sbjct: 359 IDDARDLFVSMESKGIETDAVSYNVLINGYCK-----------------------SGRMV 395

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EAK+L  +M     +P V+TY  ++ G  R G++  A  +  +M  H   P + +Y   L
Sbjct: 396 EAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILL 455

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +GLC N    EA E+ +  E   + P+   ++ ++ GL +  K+  A ++   +  +G  
Sbjct: 456 DGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLE 515

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  +   ++I  LC+ G+++ AK        KGCA N+V F +L+RGFCQ  ++++ + L
Sbjct: 516 PNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVEL 575

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L +M      PD  T + ++D LSK+ +  E   L+    ++G
Sbjct: 576 LQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 211/457 (46%), Gaps = 27/457 (5%)

Query: 156 LCQG-----AKRVLRLMARRGIECRPEAFSY--LMVAYSRAG------KLRNAMYVLSMM 202
           LC G     A  +LR M R G   RP   +Y  L+      G      KL   M   +  
Sbjct: 172 LCLGSRISEATGLLRKMVRMGY--RPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGG 229

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
               + PNL+   T I  L     + K       M+  GI+P+V+ Y+ +I G C   R 
Sbjct: 230 FGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRW 289

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFHD- 316
           + A  L +EM  +G  P+ V++  ++  LCK  +++E   L++ M+      D+  ++  
Sbjct: 290 EGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTL 349

Query: 317 ------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                 +GRI++A++L   M   G   D V+Y  ++NG+C+ G + +AKK+ ++M     
Sbjct: 350 IDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEI 409

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            P  ++Y   L GL   GK  +A  +    +    TP + TY++++ GL +   LSEA +
Sbjct: 410 MPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAME 469

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +   +    F P+    N LI  LC+  K++ A++      ++G   NV+ +T +I G C
Sbjct: 470 LFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC 529

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           + G LE A  L   M      P+ VT+ T++    +N  +++  EL+ +M  K   P   
Sbjct: 530 KSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAS 589

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQ 587
           T   V+    +  +  + L LL    ++ +    Y +
Sbjct: 590 TISIVVDLLSKDEKYREYLHLLPTFPAQGQTGRGYEK 626



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 170/332 (51%), Gaps = 12/332 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++  +  T   +GAK +   M   G+      F+ L+ A  +AGK+  A ++L
Sbjct: 272 DVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLL 331

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +   +P+    NT I    +  ++  A      M+  GI  + ++YN LI GYC  
Sbjct: 332 KLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKS 391

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-VND-------S 311
            R+ +A KL  EM  K   P  ++Y T++  L +E ++++  +L  +M V+D        
Sbjct: 392 GRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTY 451

Query: 312 NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N+  D       + EA EL + +      P +  +  +++G C+  +++ A+++  ++ H
Sbjct: 452 NILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSH 511

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G +PN ++YT  ++GLC +G+   A+++    EE+   PN +T++ +M G  +  ++ +
Sbjct: 512 EGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQK 571

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             ++++EM +K F P    I++++  L ++ K
Sbjct: 572 VVELLQEMAEKDFSPDASTISIVVDLLSKDEK 603



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 45/305 (14%)

Query: 372 PNTVSYTAFLNGLCHNG--KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
           P+      FL   C +G  K  EA  + N   +   TP   +++ ++  + +  +  +  
Sbjct: 53  PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            + + M   G  P  + +N+LI   C   K+D     + E L +G + N V FTSL++G 
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGL 172

Query: 490 CQKGDLEEALSLLDDMY-----------------LCKKD--------------------- 511
           C    + EA  LL  M                  LC                        
Sbjct: 173 CLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGV 232

Query: 512 ---PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P+ V Y TIID+L K+G +++  EL ++M  +G+ P VV Y ++IH  C  GR E  
Sbjct: 233 TIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGA 292

Query: 569 LKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
             L  +M+ +        +N +I+ LC  G +EEA  +L  +++     D  T + L++ 
Sbjct: 293 KGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDG 352

Query: 627 YLNKG 631
           +  +G
Sbjct: 353 FCLEG 357



 Score = 46.2 bits (108), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 26/153 (16%), Positives = 73/153 (47%), Gaps = 1/153 (0%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A++ F++ +    ++    ++  +++ L K +  + A+ +   ++  G+E     ++ ++
Sbjct: 467 AMELFHYLENH-DFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMI 525

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
               ++G+L NA  +   M++   APNL+  NT +      +++ K +  L+ M     +
Sbjct: 526 HGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFS 585

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
           P+  T + ++       + ++ + L+   P +G
Sbjct: 586 PDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 216/454 (47%), Gaps = 18/454 (3%)

Query: 141 PIVYYMMLEILSKTKL--CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           P VY + + I S   L     A   L  + + G +     F+ L+      GK+  A+++
Sbjct: 103 PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL 162

Query: 199 LSMMQKAAVAPNLLICNTAIHVLV-VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
              M      PN++   T I+ L  VGN  A A+R L  M+     PNV+ ++ LI   C
Sbjct: 163 FDKMIGEGFQPNVVTYGTLINGLCKVGNTSA-AIRLLRSMEQGNCQPNVVVFSTLIDSLC 221

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD- 316
              ++ +A  +  EM  KG SP+ V+Y +++  LCK    K V  LM +MV DS +  D 
Sbjct: 222 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV-DSKIMPDV 280

Query: 317 ------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                       +G + EA ++V+ M   G  P+VVTY A+++G C   E+D A K+   
Sbjct: 281 FTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDT 340

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M H  C  N +SY   +NG C      +A  +      +  TPN +TY+ ++HGL   G+
Sbjct: 341 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 400

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L +A  +  EMV +G  P  V    L   LC+   +D A   ++         ++  +T+
Sbjct: 401 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           ++ G C+ G+LE+A  L  ++      P+  TY  +I  L K G + EA++L  +M   G
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
             P   TY  +   + +       ++LLE+ML++
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 129/539 (23%), Positives = 240/539 (44%), Gaps = 60/539 (11%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ + ++       + +   M    + P++      I+ L   N++  A   L ++ 
Sbjct: 73  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+  T+  LI+G C   +I +A+ L D+M  +G  P+ V+Y T++  LCK     
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK----- 187

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                              G    A  L+  M Q  C P+VV ++ +++  C+  ++ +A
Sbjct: 188 ------------------VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +  +M   G  PN V+Y + ++GLC   +      ++N   +    P+  T + V+  
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L +EG ++EA DVV  M+ +G  P  V  N L+   C   ++D A K     ++K C  N
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVAN 349

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           V+++ +LI G+C+   +++A+ L ++M   +  P+TVTY T+I  L   GR+++A  L  
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409

Query: 539 KMLSKGLVPTVVTYRT-----------------------------------VIHRYCQVG 563
           +M+++G +P +VTYRT                                   ++   C+ G
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 469

Query: 564 RVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
            +ED   L   + SK  Q     YN +I  LC  G L EA K+  ++ +     +  T +
Sbjct: 470 ELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 529

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
           ++   +L     L   ++   M  R    D+     +   L  +G  +    ++ ++V+
Sbjct: 530 LITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKYVQ 588



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 185/397 (46%), Gaps = 12/397 (3%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   G +     +  L+    + G    A+ +L  M++    PN+++ +T I  L    +
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +A      M   GI+PN++TYN LI G C L   K    L++EM      PD  +  T
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDS--------NLFHD----QGRIEEAKELVNQMSQMG 334
           V+  LCKE  + E  D+++ M++          N   D    +  ++ A ++ + M    
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C+ +V++Y  ++NG+C++  +D+A  + ++M      PNTV+Y   ++GLCH G+  +A 
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            + +        P+ +TY  +   L +   L +A  +++ +    + P       ++  +
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CR G+++ A+       +KG   NV  +  +I G C++G L EA  L  +M      P+ 
Sbjct: 466 CRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            TY  I     +N       EL+ +ML++G    V T
Sbjct: 526 CTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST 562



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 2/279 (0%)

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           S+  F +   H     EA    N    +   P+ + ++ ++  + +    S    + R+M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              G  P    + ++I SLC   ++D A   + + L  G   +   FT+LIRG C +G +
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            EAL L D M      P+ VTY T+I+ L K G    A  L+  M      P VV + T+
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I   C+  +V +   +  +M++K        YN +I  LC     +    ++ +++ +  
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
             D  T + +V++   +G+   A+ V   M +R + P++
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNV 315



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 79/169 (46%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  + + L K +    A  +L+ +     +   + ++ ++    RAG+L +A  + 
Sbjct: 419 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 478

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S +    + PN+   N  IH L     LA+A +    M   G +PN  TYN + +G+   
Sbjct: 479 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 538

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           +     I+L++EM  +G S D  +   ++G L  +   + V+ ++ K V
Sbjct: 539 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKYV 587


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 241/506 (47%), Gaps = 37/506 (7%)

Query: 177 EAFSY--LMVAYSRAG--KLRNAMYVLSMMQK---AAVAPNLLICNTAIHVLVVGNKLAK 229
           +A SY  ++ A  R G   LR A  +L  M +    A  PN +   T +  L    +  +
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A+  L  MQ +G+  +V+TY  LI+G CD   +  A++L+DEM   G  P+ V Y  ++ 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
             C+  R                 + D G++ E       MS+ G  PDV+ +T +++  
Sbjct: 202 GYCRSGR-----------------WQDVGKVFE------DMSRRGIKPDVIMFTGLIDDL 238

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G+  +A K+   M   G +PN V+Y   +N LC  G   EA  +    +++   P+ 
Sbjct: 239 CKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDV 298

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFF--PTPVEINLLIQSLCREGKMDGAKKFM 467
           +TY+ ++ GL    ++ EA   + EM++      P  V  N +I  LC+ G+M  A K  
Sbjct: 299 VTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVR 358

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
           +    +GC  N+V +  LI GF +   ++ A++L+D++ +   +PD+ TY+ +I+  SK 
Sbjct: 359 EMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKM 418

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTA 584
             V+ A + +  M  +G+   +  Y  ++   CQ G +E  + L  +M   + C     A
Sbjct: 419 WEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM--DKNCGLDAIA 476

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           Y+ +I   C  G ++   +++  +L      DA T  +L+  Y   G    A +V  +M 
Sbjct: 477 YSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMT 536

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEE 670
               +PD+ +   + +    EG++++
Sbjct: 537 ASGFVPDVAVFDSLIKGYSAEGQTDK 562



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 225/471 (47%), Gaps = 27/471 (5%)

Query: 109 RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA 168
           R +CA  R+   E VAL     A      R D + Y  ++  L        A  +L  M 
Sbjct: 131 RGLCASRRT--GEAVALLRSMQASG---VRADVVTYGTLIRGLCDASELDAALELLDEMC 185

Query: 169 RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
             G++     +S L+  Y R+G+ ++   V   M +  + P++++    I  L    K  
Sbjct: 186 GSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTG 245

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           KA +  + M   G+ PNV+TYN LI   C    +++A+ L  EM  KG +PD V+Y T++
Sbjct: 246 KAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLI 305

Query: 289 GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             L     + E    +E+M+    +                       PDVVT+ +V++G
Sbjct: 306 AGLSGVLEMDEAMSFLEEMIQGDTVVE---------------------PDVVTFNSVIHG 344

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
            C++G + QA K+ + M   GC  N V+Y   + G     K   A  +++        P+
Sbjct: 345 LCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPD 404

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
           + TYS++++G  +  ++  A   +  M ++G          L+ ++C++G M+ A     
Sbjct: 405 SFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFN 464

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E ++K C ++ + ++++I G C+ GD++    L+ DM      PD VTY+ +I+  +K G
Sbjct: 465 E-MDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLG 523

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
            +EEA  ++ +M + G VP V  + ++I  Y   G+ + +LKL+ +M +K 
Sbjct: 524 DLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKN 574



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 225/486 (46%), Gaps = 28/486 (5%)

Query: 62  EIRRVVLEEDEFRHPLVR--EVCRLIELRSAWSPKLEGELRNLLRSLKPRQICA------ 113
           + R ++++     HP  R   V     +R   + +  GE   LLRS++   + A      
Sbjct: 103 QARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYG 162

Query: 114 -VLRSQADERVALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARR 170
            ++R   D           D        P  +VY  +L    ++   Q   +V   M+RR
Sbjct: 163 TLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRR 222

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           GI+     F+ L+    + GK   A  V  MM +  + PN++  N  I+ L     + +A
Sbjct: 223 GIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREA 282

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG---CSPDKVSYYTV 287
           L   + M   G+ P+V+TYN LI G   +  + +A+  ++EM ++G     PD V++ +V
Sbjct: 283 LTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEM-IQGDTVVEPDVVTFNSV 341

Query: 288 MGYLCKEKRIKE---VRDLMEK------MVNDSNLFHDQGRIEEAKELVNQMSQM---GC 335
           +  LCK  R+ +   VR++M +      +V  + L     R+ + K  +N M ++   G 
Sbjct: 342 IHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGL 401

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PD  TY+ ++NGF ++ E+D+A+K L  M   G K     Y   L  +C  G    A  
Sbjct: 402 EPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMG 461

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           + N  ++     +AI YS ++HG  + G +     ++++M+ +G  P  V  ++LI    
Sbjct: 462 LFNEMDKNCGL-DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYA 520

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + G ++ A++ +++    G   +V  F SLI+G+  +G  ++ L L+ +M       D  
Sbjct: 521 KLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPK 580

Query: 516 TYTTII 521
             +TII
Sbjct: 581 IISTII 586



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 162/336 (48%), Gaps = 21/336 (6%)

Query: 331 SQMGCIPDV---VTYTAVVNGFCRVG--ELDQAKKMLQQM---YHHGCKPNTVSYTAFLN 382
           S +  +PDV   V+Y  V+   CR G   L QA+ +L  M    H   +PN VSYT  + 
Sbjct: 72  SLLSALPDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMR 131

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC + ++ EA  ++ + +      + +TY  ++ GL    +L  A +++ EM   G  P
Sbjct: 132 GLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQP 191

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V  + L++  CR G+     K  ++   +G   +V+ FT LI   C++G   +A  + 
Sbjct: 192 NVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVK 251

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           D M     +P+ VTY  +I++L K G V EA  L  +M  KG+ P VVTY T+I     V
Sbjct: 252 DMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGV 311

Query: 563 GRVEDLLKLLEKMLSKQKC----RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
             +++ +  LE+M+            +N VI  LC  G + +A K+     R        
Sbjct: 312 LEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKV-----REMMAERGC 366

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            C+++  +YL  G  L  +KV   M   NL+ +L +
Sbjct: 367 MCNLVTYNYLIGGF-LRVHKVKMAM---NLMDELAI 398



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 184/365 (50%), Gaps = 17/365 (4%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D I++  +++ L K      A +V  +M +RG+E     ++ L+ +  + G +R A+ 
Sbjct: 225 KPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALT 284

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT---PNVLTYNCLIK 254
           +   M    VAP+++  NT I  L    ++ +A+ FLE M + G T   P+V+T+N +I 
Sbjct: 285 LRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEM-IQGDTVVEPDVVTFNSVIH 343

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----N 309
           G C + R+  A+K+ + M  +GC  + V+Y  ++G   +  ++K   +LM+++       
Sbjct: 344 GLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEP 403

Query: 310 DS-------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
           DS       N F     ++ A++ +  M Q G   ++  Y  ++   C+ G +++A  + 
Sbjct: 404 DSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLF 463

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            +M    C  + ++Y+  ++G C +G     +++I    +E   P+A+TYS++++   + 
Sbjct: 464 NEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKL 522

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G L EA  V+++M   GF P     + LI+    EG+ D   K + E   K  A +    
Sbjct: 523 GDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKII 582

Query: 483 TSLIR 487
           +++IR
Sbjct: 583 STIIR 587



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 54/248 (21%)

Query: 454 LCREGKMDGA----KKFMQECLNKGCAV--------NVVNFTSLIRGFCQKGD--LEEAL 499
           L R G+ D A    ++     + + C++        + V++ +++   C++G   L +A 
Sbjct: 46  LFRRGRADAAALLNRRLRGAPVTEACSLLSALPDVRDAVSYNTVLAALCRRGGDHLRQAR 105

Query: 500 SLLDDMYL---CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           SLL DM         P+ V+YTT++  L  + R  EA  L+  M + G+   VVTY T+I
Sbjct: 106 SLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLI 165

Query: 557 HRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
              C    ++  L+LL++M     Q     Y+ ++   C  G  ++ GK+   + R    
Sbjct: 166 RGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSR---- 221

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
                                          R + PD+ +   + + L  EGK+ +A  +
Sbjct: 222 -------------------------------RGIKPDVIMFTGLIDDLCKEGKTGKAAKV 250

Query: 675 MLRFVERG 682
               V+RG
Sbjct: 251 KDMMVQRG 258


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 192/376 (51%), Gaps = 25/376 (6%)

Query: 173 ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           EC P+  +Y  L+ A      +  AM +L  M      P+++  N  ++ +    +L +A
Sbjct: 11  ECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEA 70

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           ++FL  M   G  PNV+T+N +++  C   R  DA KL+ EM  KGCSP  V++  ++ +
Sbjct: 71  IKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINF 130

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LC++  +    D++EK                       M   GC P+ ++Y  +++GFC
Sbjct: 131 LCRKGLLGRAIDILEK-----------------------MPTHGCTPNSLSYNPLLHGFC 167

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +  ++D+A + L+ M   GC P+ V+Y   L  LC +GK   A E++N    +  +P  I
Sbjct: 168 KEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLI 227

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY+ V+ GL + GK  +A +++ EM  KG  P  +  + LI  L REGK++ A KF  + 
Sbjct: 228 TYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDV 287

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
              G   N   + S++ G C+    + A+  L  M      P  V+YT +I+ ++  G  
Sbjct: 288 EGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLA 347

Query: 531 EEATELMMKMLSKGLV 546
           +EA EL+ ++ S+G+V
Sbjct: 348 KEALELLNELCSRGVV 363



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 189/370 (51%), Gaps = 23/370 (6%)

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           P+++     I      + + +A++ L+ M   G  P+V+TYN L+ G C   R+ +AIK 
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVN 328
           ++ MP  G  P+ +++  ++  +C                         GR  +A++L+ 
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMC-----------------------STGRWMDAEKLLT 110

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +M + GC P VVT+  ++N  CR G L +A  +L++M  HGC PN++SY   L+G C   
Sbjct: 111 EMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEK 170

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K   A + +         P+ +TY+ ++  L ++GK+  A +++ ++  KG  P  +  N
Sbjct: 171 KMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYN 230

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            +I  L + GK D A + + E   KG   +V+ ++SLI G  ++G +EEA+    D+   
Sbjct: 231 TVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGF 290

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P+  TY +I+  L K  + + A + +  M+SKG  PT V+Y  +I      G  ++ 
Sbjct: 291 GVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEA 350

Query: 569 LKLLEKMLSK 578
           L+LL ++ S+
Sbjct: 351 LELLNELCSR 360



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 200/386 (51%), Gaps = 25/386 (6%)

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
           ++++D    K C PD ++Y  ++   C E  + +                       A +
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQ-----------------------AMK 37

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+++M   GC PDVVTY  +VNG C+ G LD+A K L  M  +G +PN +++   L  +C
Sbjct: 38  LLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMC 97

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G+ ++A +++     +  +P+ +T++++++ L R+G L  A D++ +M   G  P  +
Sbjct: 98  STGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSL 157

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N L+   C+E KMD A ++++  +++GC  ++V + +++   C+ G ++ A+ LL+ +
Sbjct: 158 SYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQL 217

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P  +TY T+ID LSK G+ ++A EL+ +M  KGL P V+TY ++I    + G+V
Sbjct: 218 SSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKV 277

Query: 566 EDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           E+ +K    +     +     YN ++  LC     + A   L  ++    K    +  +L
Sbjct: 278 EEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTIL 337

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLI 649
           +E   N+G+   A ++   + +R ++
Sbjct: 338 IEGIANEGLAKEALELLNELCSRGVV 363



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 185/378 (48%), Gaps = 29/378 (7%)

Query: 132 DRQWRYR--HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYS 187
           DRQ       D I Y +++E          A ++L  M  RG  C+P+  +Y  L+    
Sbjct: 5   DRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRG--CKPDVVTYNVLVNGMC 62

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           + G+L  A+  L+ M      PN++  N  +  +    +   A + L  M   G +P+V+
Sbjct: 63  KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           T+N LI   C    +  AI ++++MP  GC+P+ +SY  ++   CKEK++      +E M
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           V+                        GC PD+VTY  ++   C+ G++D A ++L Q+  
Sbjct: 183 VSR-----------------------GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSS 219

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P  ++Y   ++GL   GK+ +A E+++    +   P+ ITYS ++ GL REGK+ E
Sbjct: 220 KGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEE 279

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A     ++   G  P     N ++  LC+  + D A  F+   ++KGC    V++T LI 
Sbjct: 280 AIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIE 339

Query: 488 GFCQKGDLEEALSLLDDM 505
           G   +G  +EAL LL+++
Sbjct: 340 GIANEGLAKEALELLNEL 357



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 150/314 (47%), Gaps = 37/314 (11%)

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++L +     C P+ ++YT  +   C      +A ++++        P+ +TY+V+++G+
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            +EG+L EA   +  M   G  P  +  N++++S+C  G+   A+K + E + KGC+ +V
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           V F  LI   C+KG L  A+ +L+ M      P++++Y  ++    K  +++ A + +  
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGY 597
           M+S+G  P +VTY T++   C+ G+V+  ++LL ++ SK        YN VI+ L   G 
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
            ++A ++L +                                   M  + L PD+     
Sbjct: 242 TDQAVELLHE-----------------------------------MRGKGLKPDVITYSS 266

Query: 658 VSERLILEGKSEEA 671
           +   L  EGK EEA
Sbjct: 267 LIAGLSREGKVEEA 280


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 243/520 (46%), Gaps = 29/520 (5%)

Query: 147  MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
            +LEI  +  L + A+ V   M+ RG+     ++  +++   R GK++ A   L+ M +  
Sbjct: 789  VLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRG 848

Query: 207  VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
              P+   C   +  L     + +A+ +  +M   G  PN++ +  LI G C    IK A 
Sbjct: 849  FIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAF 908

Query: 267  KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------- 313
            ++++EM   G  P+  ++  ++  LCK    ++   L  K+V                  
Sbjct: 909  EMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGG 968

Query: 314  FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
            +  + ++  A+ L ++M + G  P+V TYT ++NG C+ G   +A +++  M   G  PN
Sbjct: 969  YCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPN 1028

Query: 374  TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
              +Y A ++ LC   ++ EA E++N +       + +TY++++    ++  +++A     
Sbjct: 1029 IYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFC 1088

Query: 434  EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
             M K GF       N+LI + CR+ KM  +++  Q  ++ G       +TS+I  +C++G
Sbjct: 1089 RMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 1148

Query: 494  DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            D++ AL    +M      PD+ TY ++I  L K   V+EA +L   M+ +GL P  VT  
Sbjct: 1149 DIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRV 1208

Query: 554  TVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
            T+ + YC+     + + LLE +  K   RT    ++  LCS   +  A     K+L   S
Sbjct: 1209 TLAYEYCKRNDSANAMILLEPLDKKLWIRTV-RTLVRKLCSEKKVGVAALFFQKLLEKDS 1267

Query: 614  KADASTCHVLVESYLNKGIPLLAYKVACRMFNR-NLIPDL 652
             AD  T              L A+  AC    + NL+ DL
Sbjct: 1268 SADRVT--------------LAAFTTACSESGKNNLVTDL 1293



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 148/585 (25%), Positives = 240/585 (41%), Gaps = 86/585 (14%)

Query: 111  ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
            + A L S++   VAL FFYWA    ++RH   +Y +  + L      Q A  V+R M R 
Sbjct: 698  VVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRN 757

Query: 171  GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
                           +S  G+L  A+ ++  MQ                           
Sbjct: 758  ---------------FSEIGRLNEAVGMVMDMQNQ------------------------- 777

Query: 231  LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
                      G+TP+ +T NC+++   +L  I+ A  + DEM ++G  PD  SY  +M  
Sbjct: 778  ----------GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY-KLMVI 826

Query: 291  LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
             C                     F D G+I+EA   +  M Q G IPD  T T ++   C
Sbjct: 827  GC---------------------FRD-GKIQEADRWLTGMIQRGFIPDNATCTLILTALC 864

Query: 351  RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
              G +++A    ++M   G KPN +++T+ ++GLC  G   +A EM+       W PN  
Sbjct: 865  ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 924

Query: 411  TYSVVMHGLRREGKLSEACDVVREMVKKGFF-PTPVEINLLIQSLCREGKMDGAKKFMQE 469
            T++ ++ GL + G   +A  +  ++V+   + P       +I   C+E K++ A+     
Sbjct: 925  THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 984

Query: 470  CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
               +G   NV  +T+LI G C+ G    A  L++ M      P+  TY   ID+L K  R
Sbjct: 985  MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 1044

Query: 530  VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY---- 585
              EA EL+ K  S GL    VTY  +I   C+   +   L    +M      +T +    
Sbjct: 1045 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM-----NKTGFEADM 1099

Query: 586  ---NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
               N +I   C    ++E+ ++   V+         T   ++  Y  +G   LA K    
Sbjct: 1100 RLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHN 1159

Query: 643  MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
            M     +PD      +   L  +   +EA  L    ++RG   P+
Sbjct: 1160 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 1204



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 68/168 (40%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            D + Y ++++   K      A      M + G E      + L+ A+ R  K++ +  + 
Sbjct: 1063 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 1122

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             ++    + P      + I        +  AL++   M+  G  P+  TY  LI G C  
Sbjct: 1123 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 1182

Query: 260  HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
              + +A KL + M  +G SP +V+  T+    CK         L+E +
Sbjct: 1183 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL 1230


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 242/510 (47%), Gaps = 41/510 (8%)

Query: 99  LRNLLRSLKPRQICAVLRSQA---DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTK 155
           L+ +L SL PR +  ++            L FF     +  +RH    Y  ML  L   +
Sbjct: 74  LKRILPSLTPRHVSKLITLNPLCLPPSSLLSFFNHLASRPPFRHTLHSYCTMLHFLCLHR 133

Query: 156 -LCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR-------AGKLRNAM---YVLSMMQK 204
            L Q    V  L++R+G       FS ++    R        G + +A+   YV S    
Sbjct: 134 MLPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSVGLVFDALISAYVDSGFTP 193

Query: 205 AAVAPNLLICNTAIHVLVVG--NKLAKALR------------FLERMQLAGITPNVLTYN 250
            AV    L+      V + G  N L + +R            +LE +  +G  P +  +N
Sbjct: 194 DAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEVLD-SGYPPKIYFFN 252

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEKM 307
            L+ G+C    + +A  + DE+P +G  P  VS+ T++   CK   ++E   ++ +ME  
Sbjct: 253 VLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESE 312

Query: 308 VNDSNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
               ++F           +GR++E   L ++M   G +P+ VT+T +++G C+ G++D A
Sbjct: 313 GVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLA 372

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            K  Q M   G +P+ V+Y A +NGLC  G   EAR ++N        P+ IT++ ++ G
Sbjct: 373 LKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDG 432

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
             ++G +  A ++ R MV++G     V    LI  LCREG++  A + + + L+ G   +
Sbjct: 433 CCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPD 492

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
              +T +I  FC+KGD++    LL +M      P  VTY  +++ L K G+++ A  L+ 
Sbjct: 493 DPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLD 552

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
            ML+ G+ P  +TY  ++  + + G   D+
Sbjct: 553 AMLNVGVAPNDITYNILLDGHSKHGSSVDV 582



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 201/430 (46%), Gaps = 28/430 (6%)

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           L ++ LI  Y D                 G +PD V  + ++        I+   +L+ +
Sbjct: 177 LVFDALISAYVD----------------SGFTPDAVQCFRLVTKNKFPVPIRGCENLLRR 220

Query: 307 MVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
           +V    +      IE +  L  ++   G  P +  +  +++GFC+ G++  A+ +  ++ 
Sbjct: 221 VVRLRPV-----EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIP 275

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G +P  VS+   ++G C +G   E   +    E E   P+  T+S +++GL +EG+L 
Sbjct: 276 KRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLD 335

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           E   +  EM  +G  P  V    LI   C+ GK+D A K  Q  L +G   ++V + +LI
Sbjct: 336 EGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALI 395

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C+ GDL+EA  L+++M      PD +T+TT+ID   K+G +E A E+  +M+ +G+ 
Sbjct: 396 NGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIE 455

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKI 604
              V +  +I   C+ GRV D  ++L  MLS   +     Y  VI+  C  G ++   K+
Sbjct: 456 LDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKL 515

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
           L ++          T + L+     +G    A  +   M N  + P+      ++  ++L
Sbjct: 516 LKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPN-----DITYNILL 570

Query: 665 EGKSEEADTL 674
           +G S+   ++
Sbjct: 571 DGHSKHGSSV 580



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 4/252 (1%)

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           E++  G+ P     N+L+   C+ G +  A+    E   +G    VV+F +LI G C+ G
Sbjct: 238 EVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSG 297

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           D+EE   L   M      PD  T++ +I+ L K GR++E + L  +M  +GLVP  VT+ 
Sbjct: 298 DVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFT 357

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLR 610
           T+I   C+ G+V+  LK  + ML+ Q  R     YN +I  LC  G L+EA +++ ++  
Sbjct: 358 TLIDGQCKGGKVDLALKNFQMMLA-QGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTA 416

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
           +  K D  T   L++     G    A ++  RM    +  D      +   L  EG+  +
Sbjct: 417 SGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHD 476

Query: 671 ADTLMLRFVERG 682
           A  ++   +  G
Sbjct: 477 AGRMLTDMLSAG 488



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 9/219 (4%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D + Y  ++  L K    + A+R++  M   G++     F+ L+    + G + +A+ 
Sbjct: 385 RPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALE 444

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  +  + +     I  L    ++  A R L  M  AG  P+  TY  +I  +C
Sbjct: 445 IKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFC 504

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-------- 309
               +K   KL+ EM   G  P  V+Y  +M  LCK+ ++K  + L++ M+N        
Sbjct: 505 KKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDI 564

Query: 310 DSNLFHDQGRIEEAKELVNQM-SQMGCIPDVVTYTAVVN 347
             N+  D      +   V+   S+ G + D  +YTA+VN
Sbjct: 565 TYNILLDGHSKHGSSVDVDIFNSEKGLVTDYASYTALVN 603


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/545 (25%), Positives = 246/545 (45%), Gaps = 58/545 (10%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y ++ +VY+++     K+   + A  V R+M   G+      +S LMVA+ +   +   +
Sbjct: 286 YTYNGLVYFLV-----KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 340

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           ++L  M+   V PN+      I VL    +  +A R L +M+  G  P+V+T+  LI+  
Sbjct: 341 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 400

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           CD  RI DA  +  +M      PD+V+Y T++         + V ++   M  D   ++D
Sbjct: 401 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG--YND 458

Query: 317 Q--------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                          GR+ EA E+ ++M Q G +P+  +Y ++++GF +      A ++ 
Sbjct: 459 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 518

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           + M  HG KPN  ++  F+N    +G+S++A +     + +   P+ +  + V+ GL + 
Sbjct: 519 KHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 578

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G+L  A  V  E+   G  P  +   ++I+   +  K D A K   + +   C  +V+  
Sbjct: 579 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAV 638

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            SLI    + G  +EA  +   +     +P   TY T++  L + G+V+E   L+ +M  
Sbjct: 639 NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 698

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVI----------- 589
               P ++TY T++   C+ G V D L +L  M +K      ++YN VI           
Sbjct: 699 SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE 758

Query: 590 ----------------ENLCS-------FGYLEEAGKILGK-VLRTASKADASTCHVLVE 625
                             LC+        G ++EA  I+    L+  SK D S+CH L+E
Sbjct: 759 AFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLME 818

Query: 626 SYLNK 630
             L K
Sbjct: 819 GILKK 823



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/557 (24%), Positives = 239/557 (42%), Gaps = 55/557 (9%)

Query: 147  MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
            +++ L K      A R+   +    +E     ++ L+    R GK++  M++L  M  + 
Sbjct: 641  LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN 700

Query: 207  VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG----------- 255
              PNL+  NT +  L     +  AL  L  M   G  P++ +YN +I G           
Sbjct: 701  YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAF 760

Query: 256  --YCDLHRI---------------------KDAIKLIDEMPLK-GCSPDKVSYYTVMGYL 291
              +C + ++                     K+A+ +I +  L+ G   D+ S +++M  +
Sbjct: 761  SIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGI 820

Query: 292  CKEKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKELVNQMSQMGCIPDV 339
             K+  I++  +  E + +      D            Q +  EA ELV +    G     
Sbjct: 821  LKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKT 880

Query: 340  VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
              Y +++ G      +D A+ +  +M   GC P+  +Y   L+ +   GKS+   EM+  
Sbjct: 881  GLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM---GKSMRIEEMLKV 937

Query: 400  SEE---EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
             EE   + +    +TY+ ++ GL +  +L +A D+   ++ +GF PTP     L+  L +
Sbjct: 938  QEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLK 997

Query: 457  EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
             G+++ A+    E L  GC  N   +  L+ G    G+ E+   L  DM     +PD  +
Sbjct: 998  AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS 1057

Query: 517  YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
            YT IID L K G++ +      ++L  GL P ++TY  +I    +  R+E+ + L  +M 
Sbjct: 1058 YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 1117

Query: 577  SKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
             K        YN +I +L   G   EAGK+  ++L    K +  T + L+  Y   G   
Sbjct: 1118 KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1177

Query: 635  LAYKVACRMFNRNLIPD 651
             AY    RM     +P+
Sbjct: 1178 SAYAAYGRMIVGGCLPN 1194



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 145/628 (23%), Positives = 266/628 (42%), Gaps = 54/628 (8%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           +   LRS      AL+ F  A R+ R          MLE++           V  +M R+
Sbjct: 185 VIHALRSADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ 244

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
            ++     F+ +       G LR+A   L +M++A +  N    N  ++ LV      +A
Sbjct: 245 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREA 304

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           L     M + G+ P+V TY+ L+  +     ++  + L+ EM   G  P+  SY   +  
Sbjct: 305 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 364

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
           L + KR  E   ++ KM N+              +  D GRI +AK++  +M +    PD
Sbjct: 365 LGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 424

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            VTY  +++ F   G+     ++   M   G   N V+YTA ++ LC  G+  EA EM +
Sbjct: 425 RVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFD 484

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE------------------------ 434
             +++   P   +Y+ ++ G  +  +  +A ++ +                         
Sbjct: 485 EMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSG 544

Query: 435 -----------MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
                      M  KG  P  V  N ++  L + G++  AK+   E    G + + + +T
Sbjct: 545 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 604

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            +I+   +    +EA+ +  DM      PD +   ++ID L K GR +EA  +  ++   
Sbjct: 605 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM 664

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEA 601
            L PT  TY T++    + G+V++++ LLE+M           YN +++ LC  G + +A
Sbjct: 665 NLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDA 724

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
             +L  +       D S+ + ++   + +     A+ + C+M  + LIPD      +   
Sbjct: 725 LDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPS 783

Query: 662 LILEGKSEEADTLMLRFVERGHIQPKSE 689
            +  G  +EA    L  ++   +QP S+
Sbjct: 784 FVKIGLMKEA----LHIIKDYFLQPGSK 807


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 237/497 (47%), Gaps = 28/497 (5%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +   A+ + + M ++   P+++     ++V+    K    +   + +Q+ G++ ++ T N
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            L+  +C   +   A   + +M   G  PD V++ +++   C   R+             
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM------------- 158

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                     EEA  +VNQM +MG  PDVV YT +++  C+ G ++ A  +  QM ++G 
Sbjct: 159 ----------EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGI 208

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P+ V YT+ +NGLC++G+  +A  ++    +    P+ IT++ ++    +EGK  +A +
Sbjct: 209 RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEE 268

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +  EM++    P       LI   C EG +D A++       KGC  +VV +TSLI GFC
Sbjct: 269 LYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFC 328

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +   +++A+ +  +M       +T+TYTT+I    + G+   A E+   M+S+G+ P + 
Sbjct: 329 KCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIR 388

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA-----YNQVIENLCSFGYLEEAGKIL 605
           TY  ++H  C  G+V+  L + E M  ++    A     YN ++  LC  G LE+A  + 
Sbjct: 389 TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
             + +        T  ++++     G    A  + C + ++ + P++     +   L  E
Sbjct: 449 EDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508

Query: 666 GKSEEADTLMLRFVERG 682
           G   EA  L  +  E G
Sbjct: 509 GLKHEAHVLFRKMKEDG 525



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 207/419 (49%), Gaps = 26/419 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A   L  M + G E     F+ L+  +    ++  AM +++ M +  + P++++  T I 
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L     +  AL   ++M+  GI P+V+ Y  L+ G C+  R +DA  L+  M  +   P
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D +++  ++    KE                       G+  +A+EL N+M +M   P++
Sbjct: 246 DVITFNALIDAFVKE-----------------------GKFLDAEELYNEMIRMSIAPNI 282

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            TYT+++NGFC  G +D+A++M   M   GC P+ V+YT+ +NG C   K  +A ++   
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             ++  T N ITY+ ++ G  + GK + A +V   MV +G  P     N+L+  LC  GK
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402

Query: 460 MDGAKKFMQECLNK---GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           +  A    ++   +   G A N+  +  L+ G C  G LE+AL + +DM   + D   +T
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           YT II  + K G+V+ A  L   + SKG+ P VVTY T+I    + G   +   L  KM
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 213/470 (45%), Gaps = 32/470 (6%)

Query: 172 IECRPEA----FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           +E RP      F+ L+   ++  K    + +   +Q   V+ +L  CN  ++     ++ 
Sbjct: 64  VESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQP 123

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
             A  FL +M   G  P+++T+  LI G+C  +R+++A+ ++++M   G  PD V Y T+
Sbjct: 124 YLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTI 183

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +  LCK                        G +  A  L +QM   G  PDVV YT++VN
Sbjct: 184 IDSLCK-----------------------NGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G C  G    A  +L+ M     KP+ +++ A ++     GK L+A E+ N        P
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           N  TY+ +++G   EG + EA  +   M  KG FP  V    LI   C+  K+D A K  
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            E   KG   N + +T+LI+GF Q G    A  +   M      P+  TY  ++  L  N
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400

Query: 528 GRVEEAT---ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCR 582
           G+V++A    E M K    G+ P + TY  ++H  C  G++E  L + E M  ++     
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGI 460

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
             Y  +I+ +C  G ++ A  +   +     K +  T   ++     +G+
Sbjct: 461 ITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGL 510



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 175/373 (46%), Gaps = 30/373 (8%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           + D ++Y  +++ L K      A  +   M   GI  RP+   Y  L+     +G+ R+A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGI--RPDVVMYTSLVNGLCNSGRWRDA 231

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +L  M K  + P+++  N  I   V   K   A      M    I PN+ TY  LI G
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           +C    + +A ++   M  KGC PD V+Y +++   CK K                    
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCK-------------------- 331

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
              ++++A ++  +MSQ G   + +TYT ++ GF +VG+ + A+++   M   G  PN  
Sbjct: 332 ---KVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIR 388

Query: 376 SYTAFLNGLCHNG---KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           +Y   L+ LC+NG   K+L   E +   E +   PN  TY+V++HGL   GKL +A  V 
Sbjct: 389 TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            +M K+      +   ++IQ +C+ GK+  A        +KG   NVV +T++I G  ++
Sbjct: 449 EDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508

Query: 493 GDLEEALSLLDDM 505
           G   EA  L   M
Sbjct: 509 GLKHEAHVLFRKM 521



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 132/274 (48%), Gaps = 5/274 (1%)

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           NGL H+ +  EA ++     E    P+ I ++ +++ + +  K     ++   +   G  
Sbjct: 46  NGL-HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVS 104

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
                 NLL+   C+  +   A  F+ + +  G   ++V FTSLI GFC    +EEA+S+
Sbjct: 105 HDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSM 164

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           ++ M      PD V YTTIID+L KNG V  A  L  +M + G+ P VV Y ++++  C 
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224

Query: 562 VGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
            GR  D   LL  M +K+K +     +N +I+     G   +A ++  +++R +   +  
Sbjct: 225 SGRWRDADSLLRGM-TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF 283

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           T   L+  +  +G    A ++   M  +   PD+
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 129/288 (44%), Gaps = 5/288 (1%)

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
           ++GK+L    +++ S   +W      Y  ++       + +EA D+   MV+    P+ +
Sbjct: 17  NSGKALSFSRLLDLS---FWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSII 73

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
           +   L+  + +  K D            G + ++     L+  FCQ      A S L  M
Sbjct: 74  DFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM 133

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                +PD VT+T++I+      R+EEA  ++ +M+  G+ P VV Y T+I   C+ G V
Sbjct: 134 MKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV 193

Query: 566 EDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
              L L ++M     +     Y  ++  LC+ G   +A  +L  + +   K D  T + L
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           +++++ +G  L A ++   M   ++ P++     +     +EG  +EA
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 146/342 (42%), Gaps = 57/342 (16%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
            +  R D ++Y  ++  L  +   + A  +LR M +R I+     F+ L+ A+ + GK  
Sbjct: 205 NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIH-------------------------------VLV 222
           +A  + + M + ++APN+    + I+                                L+
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324

Query: 223 VG----NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
            G     K+  A++    M   G+T N +TY  LI+G+  + +   A ++   M  +G  
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQM-GCIP 337
           P+  +Y  ++  LC   ++K+   + E M                     Q  +M G  P
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDM---------------------QKREMDGVAP 423

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           ++ TY  +++G C  G+L++A  + + M         ++YT  + G+C  GK   A  + 
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +   +   PN +TY+ ++ GL REG   EA  + R+M + G
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 216/441 (48%), Gaps = 32/441 (7%)

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           M ++  M      P+L+     ++ L        A   L +M+   + P VL YN +I G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
            C    + DA+ L  EM  KG  P+ V+Y +++  LC                       
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC----------------------- 97

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
           + GR  +A  L++ M +    PDV T++A+++ F + G+L +A+K+  +M      P+ V
Sbjct: 98  NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 157

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y++ +NG C + +  EA++M      +   P+ +TY+ ++ G  +  ++ E  +V REM
Sbjct: 158 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 217

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            ++G     V  N+LIQ L + G  D A++  +E ++ G   N++ + +L+ G C+ G L
Sbjct: 218 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 277

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           E+A+ + + +   K +P   TY  +I+ + K G+VE+  +L   +  KG+ P VV Y T+
Sbjct: 278 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 337

Query: 556 IHRYCQVGRVEDLLKLLEKM-----LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           I  +C+ G  E+   L ++M     L    C   YN +I      G  E + +++ ++  
Sbjct: 338 ISGFCRKGSKEEADALFKEMKEDGTLPNSGC---YNTLIRARLRDGDREASAELIKEMRS 394

Query: 611 TASKADASTCHVLVESYLNKG 631
                DAST   LV + L+ G
Sbjct: 395 CGFAGDASTIG-LVTNMLHDG 414



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 200/399 (50%), Gaps = 16/399 (4%)

Query: 174 CRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C+P+  +Y +V     + G    A  +L+ M++  + P +LI NT I  L     +  AL
Sbjct: 12  CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 71

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
              + M+  GI PNV+TY+ LI   C+  R  DA +L+ +M  +  +PD  ++  ++   
Sbjct: 72  NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 131

Query: 292 CKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDV 339
            KE ++ E   L ++MV  S            N F    R++EAK++   M    C PDV
Sbjct: 132 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 191

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           VTY  ++ GFC+   +++  ++ ++M   G   NTV+Y   + GL   G    A+E+   
Sbjct: 192 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 251

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
              +   PN +TY+ ++ GL + GKL +A  V   + +    PT    N++I+ +C+ GK
Sbjct: 252 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 311

Query: 460 M-DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           + DG   F    L KG   +VV + ++I GFC+KG  EEA +L  +M      P++  Y 
Sbjct: 312 VEDGWDLFCNLSL-KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 370

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           T+I A  ++G  E + EL+ +M S G      T   V +
Sbjct: 371 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 409



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 178/365 (48%), Gaps = 3/365 (0%)

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+++M   GC PD+VTY  VVNG C+ G+ D A  +L +M     +P  + Y   ++GLC
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
                 +A  +    E +   PN +TYS ++  L   G+ S+A  ++ +M+++   P   
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             + LI +  +EGK+  A+K   E + +    ++V ++SLI GFC    L+EA  + + M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 PD VTY T+I    K  RVEE  E+  +M  +GLV   VTY  +I    Q G  
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 566 EDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           +   ++ ++M+S         YN +++ LC  G LE+A  +   + R+  +    T +++
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +E     G     + + C +  + + PD+     +      +G  EEAD L     E G 
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 684 IQPKS 688
           + P S
Sbjct: 363 L-PNS 366



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 192/409 (46%), Gaps = 27/409 (6%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           Q +     ++Y  +++ L K K    A  + + M  +GI      +S L+      G+  
Sbjct: 44  QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 103

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
           +A  +LS M +  + P++   +  I   V   KL +A +  + M    I P+++TY+ LI
Sbjct: 104 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 163

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            G+C   R+ +A ++ + M  K C PD V+Y T++   CK K                  
Sbjct: 164 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK------------------ 205

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                R+EE  E+  +MSQ G + + VTY  ++ G  + G+ D A+++ ++M   G  PN
Sbjct: 206 -----RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 260

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            ++Y   L+GLC NGK  +A  +    +     P   TY++++ G+ + GK+ +  D+  
Sbjct: 261 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 320

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            +  KG  P  V  N +I   CR+G  + A    +E    G   N   + +LIR   + G
Sbjct: 321 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 380

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           D E +  L+ +M  C    D  T   + + L  +GR++++    + MLS
Sbjct: 381 DREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS---FLDMLS 425


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 221/458 (48%), Gaps = 25/458 (5%)

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           Y    + K    P+ +   T I    +  ++ +AL F +++   G   + ++Y  LI G 
Sbjct: 249 YTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGL 308

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C +   K A++L+     K   PD V Y T++  +CK+K + +  DL  + V+       
Sbjct: 309 CKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSK------ 362

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
             RI                PDV TY A+++GFC VG+L  A  +  +M      P+  +
Sbjct: 363 --RI---------------FPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYT 405

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           ++  ++G C +G   EA+ ++    ++   P+ +TYS +M G     ++++A  +   M 
Sbjct: 406 FSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMS 465

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            +G        N++I   C+   +D A K  +E  +K    +V+ ++SLI G C+ G + 
Sbjct: 466 HRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRIS 525

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            AL L+D+M+   + PD +TY +I+DAL K   V++A  L+ K+  +G+ P + TY  ++
Sbjct: 526 YALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILV 585

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
              CQ G++ED  K+ E +L K       AY  +I+  C  G  +EA  +L K+      
Sbjct: 586 KGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCI 645

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
            DA T  +++ S   K    +A K+   M  R L+  L
Sbjct: 646 PDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVAL 683



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 216/445 (48%), Gaps = 27/445 (6%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G  P+ +T    IKG+C   +I  A+   D++   G   D+VSY T++  LCK    K  
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
            +L+ +  ND  L                       PDVV Y  +++G C+   ++ A  
Sbjct: 318 LELLRR--NDGKLVQ---------------------PDVVMYNTIIDGMCKDKHVNDAFD 354

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +  +       P+  +Y A ++G C  GK  +A ++ N    +   P+  T+S+++ G  
Sbjct: 355 LYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFC 414

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           ++G + EA +V+  M+K+   P  V  + L+   C   +++ A+       ++G   NV 
Sbjct: 415 KDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQ 474

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
           ++  +I GFC+   ++EA+ L  +M+  +  PD +TY+++ID L K+GR+  A EL+ +M
Sbjct: 475 SYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEM 534

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGY 597
             +G  P ++TY +++   C+   V+  + LL K L  Q  R     Y  +++ LC  G 
Sbjct: 535 HYRGQQPDIITYNSILDALCKKHHVDKAITLLTK-LKGQGIRPDMNTYTILVKGLCQSGK 593

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
           LE+A K+   +L      D     V+++ + +KG+   A  +  +M     IPD K  + 
Sbjct: 594 LEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEI 653

Query: 658 VSERLILEGKSEEADTLMLRFVERG 682
           +   L  + +++ A+ L+   + RG
Sbjct: 654 IILSLFEKDENDMAEKLLREMIMRG 678



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 227/499 (45%), Gaps = 45/499 (9%)

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP-----LK 275
           LV        L   ++M+  GI  N L  N LI  +C L  I  A  ++         LK
Sbjct: 120 LVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFCQLGLIPFAFSVLTRGVYWIEILK 179

Query: 276 GCSPDK-------VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVN 328
            C   K       + +  ++ +  K   +K+   L  ++ N  + F  +  IE  K  + 
Sbjct: 180 DCFDRKNLEDFKRLCWIVLILWDFKRLFLKDF--LQSRLFNVLHSF--KILIEYHKTFIK 235

Query: 329 Q-----------------MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           Q                 + + G  PD +T T  + GFC  G++ QA     ++   G  
Sbjct: 236 QKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFH 295

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            + VSY   +NGLC  G++  A E++  ++ +   P+ + Y+ ++ G+ ++  +++A D+
Sbjct: 296 LDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDL 355

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             E V K  FP     N LI   C  GK+  A     +  +K    +V  F+ L+ GFC+
Sbjct: 356 YSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCK 415

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G+++EA ++L  M      PD VTY++++D       V +A  +   M  +G+   V +
Sbjct: 416 DGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQS 475

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y  +I+ +C++  V++ +KL ++M  KQ       Y+ +I+ LC  G +  A +++ ++ 
Sbjct: 476 YNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMH 535

Query: 610 RTASKADASTCHVLVES-----YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
               + D  T + ++++     +++K I LL      ++  + + PD+     + + L  
Sbjct: 536 YRGQQPDIITYNSILDALCKKHHVDKAITLLT-----KLKGQGIRPDMNTYTILVKGLCQ 590

Query: 665 EGKSEEADTLMLRFVERGH 683
            GK E+A  +    + +G+
Sbjct: 591 SGKLEDARKVFEDLLVKGY 609



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 159/315 (50%), Gaps = 23/315 (7%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  + I      FS L+  + + G ++ A  VL+MM K ++ P+++  ++ +    + N+
Sbjct: 394 MTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNE 453

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + KA      M   G+T NV +YN +I G+C +  + +A+KL  EM  K   PD ++Y +
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LCK                        GRI  A ELV++M   G  PD++TY +++
Sbjct: 514 LIDGLCK-----------------------SGRISYALELVDEMHYRGQQPDIITYNSIL 550

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C+   +D+A  +L ++   G +P+  +YT  + GLC +GK  +AR++      + + 
Sbjct: 551 DALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYN 610

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            +   Y+V++ G   +G   EA  ++ +M + G  P      ++I SL  + + D A+K 
Sbjct: 611 LDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKL 670

Query: 467 MQECLNKGCAVNVVN 481
           ++E + +G  V + +
Sbjct: 671 LREMIMRGLLVALTD 685



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 144/300 (48%), Gaps = 23/300 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   + ++++   K    + AK VL +M ++ I+     +S LM  Y    ++  A  + 
Sbjct: 402 DVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIF 461

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M    V  N+   N  I+       + +A++  + M    I P+V+TY+ LI G C  
Sbjct: 462 NTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKS 521

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            RI  A++L+DEM  +G  PD ++Y +++  LCK+                         
Sbjct: 522 GRISYALELVDEMHYRGQQPDIITYNSILDALCKKH-----------------------H 558

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +++A  L+ ++   G  PD+ TYT +V G C+ G+L+ A+K+ + +   G   +  +YT 
Sbjct: 559 VDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTV 618

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            + G C  G   EA  +++  EE    P+A TY +++  L  + +   A  ++REM+ +G
Sbjct: 619 MIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 231/494 (46%), Gaps = 60/494 (12%)

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           N    A+    R++  GITP++ T+N LI  YC +  +  A  ++ ++   G  PD +++
Sbjct: 82  NHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITF 141

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            T++  LC   ++KE              FHD             +  +G   D  +Y  
Sbjct: 142 NTLIKGLCLNGKVKEALH-----------FHDH------------VLALGFHLDQFSYGT 178

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++NG C++GE   A +ML+++     K N V Y   ++ LC +   ++A E+ +    + 
Sbjct: 179 LINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKK 238

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
            +P+ +T+S +++G    G+L EA  + REMV K   P     N+L+ +LC+EG + GAK
Sbjct: 239 ISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAK 298

Query: 465 KFMQECLNKGCAVNVVNFTSL-----------------------------------IRGF 489
             +   + +G   NVV ++SL                                   I GF
Sbjct: 299 NMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGF 358

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+   ++EALSL +DM      PD VTY ++ID L K+GR+  A EL+ +M   G    +
Sbjct: 359 CKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANI 418

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
            TY  +I   C+   V+  + L++K+  +  Q     +N +I  LC  G L+ A  +   
Sbjct: 419 FTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQD 478

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +L      +A T +++V     +G+   A  +  +M +  +IPD    + + + L  + +
Sbjct: 479 LLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDE 538

Query: 668 SEEADTLMLRFVER 681
           +E+A+ L+   + R
Sbjct: 539 NEKAEKLLREMIAR 552



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 224/468 (47%), Gaps = 25/468 (5%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           R +   GI      F+ L+  Y    ++  A  +++ + K    P+ +  NT I  L + 
Sbjct: 92  RRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLN 151

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            K+ +AL F + +   G   +  +Y  LI G C +   + A++++ ++  K    + V Y
Sbjct: 152 GKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMY 211

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            T++  LCK K +                        +A EL +QM      PDVVT++A
Sbjct: 212 NTIIDSLCKHKLVI-----------------------DAYELYSQMIAKKISPDVVTFSA 248

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++ GFC VG+L++A  + ++M      P+  ++   ++ LC  G    A+ M+    +E 
Sbjct: 249 LIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEG 308

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             PN +TYS +M G     ++++A  V+  + + G  P       +I   C+   +D A 
Sbjct: 309 VMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEAL 368

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
               +   KG A + V + SLI G C+ G +  A  L+D+M+   +  +  TY  +IDAL
Sbjct: 369 SLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDAL 428

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA 584
            KN  V++A  L+ K+  +G+ P + T+  +I+  C+VGR+++   + + +LSK     A
Sbjct: 429 CKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNA 488

Query: 585 --YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
             YN ++  LC  G  +EA  +L K+       DA T   L+++  +K
Sbjct: 489 WTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHK 536



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 202/404 (50%), Gaps = 25/404 (6%)

Query: 177 EAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
           + FSY  L+    + G+ R A+ +L  +    V  N+++ NT I  L     +  A    
Sbjct: 172 DQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELY 231

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
            +M    I+P+V+T++ LI G+C + ++++A  L  EM LK  +PD  ++  ++  LCKE
Sbjct: 232 SQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKE 291

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
                                  G ++ AK ++  M + G +P+VVTY+++++G+C V +
Sbjct: 292 -----------------------GNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQ 328

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           +++AK +L  +   G  PN  SY   +NG C      EA  + N  + +   P+ +TY+ 
Sbjct: 329 VNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNS 388

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ GL + G++S A ++V EM   G        N LI +LC+   +D A   +++  ++G
Sbjct: 389 LIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQG 448

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              ++  F  LI G C+ G L+ A  +  D+       +  TY  +++ L K G  +EA 
Sbjct: 449 IQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAE 508

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            L+ KM   G++P  VTY T+I         E   KLL +M+++
Sbjct: 509 ALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIAR 552



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 208/421 (49%), Gaps = 23/421 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +  D   Y  ++  L K    + A ++LR +  + ++     ++ ++ +  +   + +A 
Sbjct: 169 FHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAY 228

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            + S M    ++P+++  +  I+   +  +L +A      M L  I P+  T+N L+   
Sbjct: 229 ELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDAL 288

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C    +K A  ++  M  +G  P+ V+Y ++M   C              +VN       
Sbjct: 289 CKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYC--------------LVN------- 327

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
             ++ +AK ++N +SQMG  P+  +Y  ++NGFC++  +D+A  +   M   G  P+ V+
Sbjct: 328 --QVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVT 385

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y + ++GLC +G+   A E+++   +     N  TY+ ++  L +   + +A  +V+++ 
Sbjct: 386 YNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIK 445

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            +G  P     N+LI  LC+ G++  A+   Q+ L+KG +VN   +  ++ G C++G  +
Sbjct: 446 DQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFD 505

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           EA +LL  M      PD VTY T+I AL      E+A +L+ +M+++ +V  +     V+
Sbjct: 506 EAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEGLEMVL 565

Query: 557 H 557
           H
Sbjct: 566 H 566



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 183/387 (47%), Gaps = 24/387 (6%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            + R ALQ     D +   + + ++Y  +++ L K KL   A  +   M  + I      
Sbjct: 187 GETRTALQMLRKIDGKL-VKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVT 245

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS L+  +   G+L  A  +   M    + P+    N  +  L     L  A   L  M 
Sbjct: 246 FSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMM 305

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G+ PNV+TY+ L+ GYC ++++  A  +++ +   G +P+  SY T++   CK K   
Sbjct: 306 KEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIK--- 362

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                                ++EA  L N M   G  PD VTY ++++G C+ G +  A
Sbjct: 363 --------------------MVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYA 402

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            +++ +M+ +G   N  +Y   ++ LC N    +A  ++   +++   P+  T++++++G
Sbjct: 403 WELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYG 462

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L + G+L  A DV ++++ KG+       N+++  LC+EG  D A+  + +  + G   +
Sbjct: 463 LCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPD 522

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDM 505
            V + +LI+    K + E+A  LL +M
Sbjct: 523 AVTYETLIQALFHKDENEKAEKLLREM 549


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 224/466 (48%), Gaps = 42/466 (9%)

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS--PDKVSYYTVMGYLCKEKRI 297
           A + P+V+TY  L+ G C   R+ DA++++D M  +     PD V+  TV+  LCK    
Sbjct: 166 ASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCK---- 221

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQ-MSQM-GCIPDVVTYTAVVNGFCRVGEL 355
                               GR++EA   V Q MS + GC P+ VTY  +++ FCRVG +
Sbjct: 222 -------------------SGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNI 262

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW--WTPNAITYS 413
             A +++++M + G   N V+    + GLC  G++  A E        W     NA+TYS
Sbjct: 263 SMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYS 322

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++  L     +  A ++  E + +G  P  +    +I  L + G+++ A          
Sbjct: 323 TLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEA 382

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G  ++   +  LI GFC+K  L EA  LL +M      PD  TY T++    K G     
Sbjct: 383 GFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAV 442

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIEN 591
            EL+ KM+  G  P+V+T+ T++H YC+VG++++ L++L  M           YN +I+ 
Sbjct: 443 DELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDF 502

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC  G ++ A ++  ++   +  A+ +T + L++   +K +P  A+++  +M      PD
Sbjct: 503 LCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPD 562

Query: 652 LKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRV 697
                 + E L + G+++     + RF+++G       EH   +R+
Sbjct: 563 YVTVDVLMEWLPVIGETDR----LKRFMQQG-------EHTASKRI 597



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 211/455 (46%), Gaps = 56/455 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   +  +L  L++ +   G  R+  LM +     RP+  +Y  L+    +AG++ +A+ 
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALM-QGCASVRPDVVTYGILVNGLCKAGRVGDALR 193

Query: 198 VLSMM--QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE-RMQ-LAGITPNVLTYNCLI 253
           VL  M  Q   + P+++  NT +  L    ++ +AL F+E RM  + G  PN +TYNCLI
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLI 253

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR-------IKEVRD---- 302
             +C +  I  A +L+++M  +G   + V+  T++G LC+  R        +E R     
Sbjct: 254 DAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPE 313

Query: 303 ----------LMEKMVNDSN------LFHDQ----------------------GRIEEAK 324
                     L+  +++ +N      LFH++                      GR+E+A 
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDAC 373

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            + + M + G   D   Y  ++ GFCR   L +A ++LQ+M   G +P+  +Y   L+G 
Sbjct: 374 SMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGS 433

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  G      E++    ++   P+ IT+  ++HG  + GK+ EA  ++R M + G  P  
Sbjct: 434 CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N LI  LC+ G +D A +   E   K    NV  F +L++G   K   E+A  L+D 
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           M   +  PD VT   +++ L   G  +     M +
Sbjct: 554 MREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 215/483 (44%), Gaps = 71/483 (14%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQK-AAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           AF+ ++ A +R   +     + ++MQ  A+V P+++     ++ L    ++  ALR L+ 
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDG 197

Query: 237 M--QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE--MPLKGCSPDKVSYYTVMGYLC 292
           M  Q   I P+V+T N ++ G C   R+++A+  +++    + GC P+ V+Y  ++   C
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC 257

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           +                        G I  A ELV +M   G   ++VT   +V G CR 
Sbjct: 258 R-----------------------VGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRA 294

Query: 353 GELDQAKKMLQQ---MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           G    A +  ++   ++  G K N V+Y+  +  L H      A E+ +    E  +P+A
Sbjct: 295 GRTGAALEFFREKRTVWPEG-KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDA 353

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           I Y  ++ GL + G+L +AC +   M + GF       N+LI   CR+ ++  A + +QE
Sbjct: 354 IMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQE 413

Query: 470 C-----------------------------------LNKGCAVNVVNFTSLIRGFCQKGD 494
                                               ++ GC  +V+ F +L+ G+C+ G 
Sbjct: 414 MKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGK 473

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           ++EAL +L  M      P+ V Y T+ID L K G V+ A EL  +M  K +   V T+  
Sbjct: 474 IDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNA 533

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV---IENLCSFGYLEEAGKILGKVLRT 611
           ++         E   +L+++M  +++C   Y  V   +E L   G  +   + + +   T
Sbjct: 534 LLKGLRDKNMPEKAFELMDQM-REERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHT 592

Query: 612 ASK 614
           ASK
Sbjct: 593 ASK 595



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 27/241 (11%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           ++  ++ D   Y +++    + K    A  +L+ M   GI  RP+  +Y  L+    +AG
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI--RPDVCTYNTLLSGSCKAG 437

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
                  +L  M      P+++   T +H      K+ +ALR L  M  +GI PN + YN
Sbjct: 438 DFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYN 497

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI   C    +  AI+L DEM  K   P  V+ +  +        +K +R         
Sbjct: 498 TLIDFLCKRGDVDLAIELFDEMKEKSV-PANVTTFNAL--------LKGLR--------- 539

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                D+   E+A EL++QM +  C PD VT   ++     +GE D+ K+ +QQ  H   
Sbjct: 540 -----DKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTAS 594

Query: 371 K 371
           K
Sbjct: 595 K 595


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 211/473 (44%), Gaps = 38/473 (8%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G+     AF+ L+ A+S AG+  +A+   S M +    P   + NT +  LV    +  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           L    RM  AG  PN  TYN L+ G C      DA+K+ DEM  +G  P+   Y  ++  
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LC                       + G+I+EA +L+  M   GC+PD VTY A ++G C
Sbjct: 252 LC-----------------------NAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLC 288

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +VG +++A + L  +   G       Y+  ++GL    +  E      T  E   +P+ +
Sbjct: 289 KVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVV 348

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            Y++++ G    G++ +A   +  M KKGF P     N +++ LC  G ++ A     E 
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           L     ++    T +I G C++G ++EA+ + D+M     DP  +TY  +ID   + GR+
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468

Query: 531 EEATELMMKM-------------LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           EEA  L  KM             L    V    + R ++H  CQ G+V    KLL  ++ 
Sbjct: 469 EEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIID 528

Query: 578 KQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
                    YN +I  LC    L+ A ++  ++       D  T   L++  L
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLL 581



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 214/483 (44%), Gaps = 64/483 (13%)

Query: 172 IECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
            + RP AF Y  ++ A   +G +  A+ + + M  A  APN    N  +  L        
Sbjct: 166 FQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGD 225

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           AL+  + M   GI PNV  Y  L+   C+  +I +A++L+  M  KGC PD+V+Y   + 
Sbjct: 226 ALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLS 285

Query: 290 YLCKEKRIKEV---------------------------------------RDLMEKMVND 310
            LCK  R+ E                                        + ++E+ ++ 
Sbjct: 286 GLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP 345

Query: 311 SNLFH--------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
             + +        + GRIE+A   ++ M + G +PD   Y  V+   C  G+L++A  + 
Sbjct: 346 DVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLR 405

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            +M  +    ++ + T  + GLC  G   EA ++ +   E    P  +TY+ ++ G  RE
Sbjct: 406 SEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYRE 465

Query: 423 GKLSEACDVVREMVKKGFFPTPV--------------EINLLIQSLCREGKMDGAKKFMQ 468
           G+L EA  +  +M + G  P+                 +  L+  +C+ G++  A K ++
Sbjct: 466 GRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLR 524

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
             ++ G   +VV + +LI G C+  +L+ A+ L  ++ L    PD +TY T+ID L +  
Sbjct: 525 SIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAH 584

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV 588
           R  +A  L   +L  G  P++  Y +++   C++ ++   + L    L K+      ++V
Sbjct: 585 RENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEV 644

Query: 589 IEN 591
           + N
Sbjct: 645 LAN 647



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 139/316 (43%), Gaps = 2/316 (0%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR  +A +  ++M +    P    Y  ++      G +  A  +  +M   GC PN  +Y
Sbjct: 151 GRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATY 210

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              ++GLC  G + +A +M +   +    PN   Y+V++  L   GK+ EA  ++  M  
Sbjct: 211 NVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKD 270

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P  V  N  +  LC+ G+++ A + +    + G A+ +  ++ LI G  Q    +E
Sbjct: 271 KGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDE 330

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
                  M      PD V YT +I   ++ GR+E+A   +  M  KG VP    Y TV+ 
Sbjct: 331 GFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLK 390

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIE--NLCSFGYLEEAGKILGKVLRTASKA 615
             C  G +E    L  +ML       +  Q I    LC  G ++EA +I  ++       
Sbjct: 391 VLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDP 450

Query: 616 DASTCHVLVESYLNKG 631
              T + L++ +  +G
Sbjct: 451 TVMTYNALIDGFYREG 466



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 145/337 (43%), Gaps = 2/337 (0%)

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
            + A+V      G    A +   +M     +P    Y   L  L  +G  L A  + N  
Sbjct: 139 AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRM 198

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
                 PN  TY+V+M GL ++G   +A  +  EM+ +G  P      +L+ SLC  GK+
Sbjct: 199 VAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKI 258

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D A + +    +KGC  + V + + + G C+ G + EA   L  +           Y+ +
Sbjct: 259 DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCL 318

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           ID L +  R +E       ML + + P VV Y  +I    + GR+ED L  L+ M  K  
Sbjct: 319 IDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGF 378

Query: 581 CRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
                 YN V++ LC  G LE A  +  ++L+     D++T  +++     +G+   A +
Sbjct: 379 VPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQ 438

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           +   M      P +     + +    EG+ EEA  L 
Sbjct: 439 IFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLF 475



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/447 (21%), Positives = 169/447 (37%), Gaps = 98/447 (21%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           + M  R I      ++ ++   + AG++ +A+  L +M+K    P+    NT + VL   
Sbjct: 336 KTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDH 395

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             L +A      M    +  +  T   +I G C    + +A+++ DEM   GC P  ++Y
Sbjct: 396 GDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTY 455

Query: 285 YTVMGYLCKEKRIKEVRDLMEKM------------------VNDS----NLFHD---QGR 319
             ++    +E R++E R L  KM                  V DS     L HD    G+
Sbjct: 456 NALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQ 515

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML----------------- 362
           + +A +L+  +   G +PDVVTY  ++NG C+   LD A ++                  
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575

Query: 363 ------------------QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA----------- 393
                             Q +   G  P+   Y + +  LC   K  +A           
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK 635

Query: 394 --------------------------REMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
                                     RE+I   ++E+ + ++  Y++ + GL +  +  +
Sbjct: 636 YNFPVESEVLANAHKEIEDGSLDDGVRELIKI-DQEYGSISSNPYTIWLIGLCQVRRTDD 694

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +   + + G   TP    LLI  LC +  ++ A   M   L+K   ++      L+R
Sbjct: 695 ALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLR 754

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDT 514
             C     ++A +L   M+L   D D 
Sbjct: 755 WLCICYRRQDAQALAWRMHLVGYDMDV 781


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 224/418 (53%), Gaps = 5/418 (1%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           +W Y+ D +    +++ L      + A      +  +G      ++  L+    + G+ R
Sbjct: 126 KWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETR 185

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A+ +L  +      PN+++ NT I  L     +++A      M + GI+ NV+TY+ +I
Sbjct: 186 AAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAII 245

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND--- 310
            G+C + ++ +A+  ++EM LK  +PD   Y T++  L KE ++KE ++++  +V     
Sbjct: 246 HGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLK 305

Query: 311 SNLFHDQGRIEE-AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
            N+      I+  AK + N +  MG  PDV +Y  ++N  C++  +++A  + ++M+   
Sbjct: 306 PNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKN 365

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PNTV+Y + ++GLC +G+   A ++I+   +     N ITY+ +++GL + G+L +A 
Sbjct: 366 MVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAI 425

Query: 430 DVVREMVKKGFFPTPVEINLLIQS-LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            ++ +M  +G  P    +N+L+   LC+  ++  A+   Q+ L+KG   NV  +  +I G
Sbjct: 426 ALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYG 485

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            C++G L+EA +L   M      P+ +T+  II AL + G  ++A +L+ +M+++GL+
Sbjct: 486 HCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 239/517 (46%), Gaps = 36/517 (6%)

Query: 138 RHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           RH P  I +  +L+  +K K       + R +  + I+      + L+  +   G++  A
Sbjct: 58  RHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLA 117

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             VLS + K    P+ +   T I  L +  ++ KAL F +++   G   + ++Y  LI G
Sbjct: 118 FSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLING 177

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
            C +   + AI+L+  +  +   P+ V Y T++  LCK K +                  
Sbjct: 178 VCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLV------------------ 219

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
                 EA  L ++MS  G   +VVTY+A+++GFC VG+L +A   L +M      P+  
Sbjct: 220 -----SEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVY 274

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            Y   ++ L   GK  EA+ ++    +    PN ITY+ ++ G  +         V   +
Sbjct: 275 IYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKH--------VFNAV 326

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              G  P     N++I  LC+  +++ A    +E   K    N V + SLI G C+ G +
Sbjct: 327 GLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRI 386

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
             A  L+D+M+      + +TY ++I+ L KNG++++A  L+ KM  +G+ P + T   +
Sbjct: 387 SYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNIL 446

Query: 556 IHRY-CQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +H   C+  R+++   L + +L K        YN +I   C  G L+EA  +  K+  + 
Sbjct: 447 LHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSG 506

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
              +A T  +++ + L KG    A K+ C M  R L+
Sbjct: 507 CSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 180/377 (47%), Gaps = 30/377 (7%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PD  T   ++N FC +G+++ A  +L ++   G +P+TV+ T  + GLC  G+  +A   
Sbjct: 96  PDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHF 155

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
            +    + +  + ++Y  +++G+ + G+   A  ++R +  +   P  V  N +I  LC+
Sbjct: 156 HDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCK 215

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
              +  A     E   KG + NVV ++++I GFC  G L EAL  L++M L   +PD   
Sbjct: 216 RKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYI 275

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV--------------------- 555
           Y T++DAL K G+V+EA  ++  ++   L P V+TY T+                     
Sbjct: 276 YNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDV 335

Query: 556 ------IHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGK 607
                 I+R C++ RVE+ L L ++M  K        YN +I+ LC  G +  A  ++ +
Sbjct: 336 WSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDE 395

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +      A+  T + L+      G    A  +  +M ++ + PD+     +   L+ +GK
Sbjct: 396 MHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGK 455

Query: 668 S-EEADTLMLRFVERGH 683
             + A  L    +++G+
Sbjct: 456 RLKNAQGLFQDLLDKGY 472


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 223/449 (49%), Gaps = 20/449 (4%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR--AGKLRNAMYVL- 199
            Y  +++ L+K  +   A  V   M  +   C P   +Y ++  SR  AG+   A+ +  
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETM--KSESCVPSLVTYNVLINSRCNAGEFGKALDLFQ 69

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           SM ++  V P+    NT I  L        A + L  M+   I  NV TY+ +IK     
Sbjct: 70  SMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKE 129

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
            + +++ K+++EM   GC+PD  ++  VM    +   +++ R++ + MV      D+  +
Sbjct: 130 AKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSY 189

Query: 315 H-------DQGRIEEAKELVNQMS--QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
           H         G+++E+ +++++M+    G +P+V+T++ +++G CR GEL++A ++   M
Sbjct: 190 HILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSM 249

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              GCKPN  +YT  + GLC   K ++ARE+     +    P+A+ Y+ ++ G  + G +
Sbjct: 250 LEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSM 309

Query: 426 SEACDVVREMV-KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
            EA  + REM    G  PT V  N LI   C+ GK+  A + + E   KG A +   +  
Sbjct: 310 DEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRI 369

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G  +   L+EAL +   M   K   D V+  + +  L K G +++A  +       G
Sbjct: 370 LIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSG 429

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VP   T+R +     ++GRVED  KL+E
Sbjct: 430 AVPNPETFRILSESLIKLGRVEDAQKLME 458



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 226/461 (49%), Gaps = 29/461 (6%)

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           +A+ +++ + ++AG L  A+ V   M+  +  P+L+  N  I+      +  KAL   + 
Sbjct: 11  DAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQS 70

Query: 237 MQLAG-ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
           M+    + P+  TYN LI G C     + A KL+ EM  K  + +  +Y +++  L KE 
Sbjct: 71  MKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKE- 129

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                                  + EE+ +++ +M   GC PDV  +  V+ GF R   +
Sbjct: 130 ----------------------AKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNM 167

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN--TSEEEWWTPNAITYS 413
           ++A+++ Q M   G KP+ VSY   ++GL   GK  E+ ++++        + PN IT+S
Sbjct: 168 EKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFS 227

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++HGL R G+L +A +V   M++ G  P       LI  LCR  K+  A++  ++    
Sbjct: 228 TLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQA 287

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK-DPDTVTYTTIIDALSKNGRVEE 532
               + V + SLI G+C++G ++EA  L  +M       P  VT+ T+ID   K G++  
Sbjct: 288 CIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGR 347

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV--IE 590
           A EL+ +M +KGL     TYR +I    +  ++++ L++ ++M  K+      + V  + 
Sbjct: 348 ANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVG 407

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            LC  G +++A  +     ++ +  +  T  +L ES +  G
Sbjct: 408 GLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLG 448



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 161/334 (48%), Gaps = 30/334 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   +  +++  +++   + A+ V + M   G   +P+  SY  L+   ++ GKL  ++ 
Sbjct: 150 DVFAFNGVMQGFARSNNMEKAREVYQHMVESGY--KPDNVSYHILIHGLAKIGKLDESLK 207

Query: 198 VLS--MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           +LS   M+ A   PN++  +T IH L    +L KAL     M  AG  PN  TY  LI G
Sbjct: 208 ILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAG 267

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
            C   ++  A +L ++M      PD V+Y +++   CK                      
Sbjct: 268 LCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK---------------------- 305

Query: 316 DQGRIEEAKELVNQMS-QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
            +G ++EA++L  +MS   G  P +VT+  +++GFC++G+L +A +++ +M   G   +T
Sbjct: 306 -RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADT 364

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +Y   + GL    K  EA E+     E+ +  + ++    + GL + G + +A  V   
Sbjct: 365 CTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEA 424

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
             K G  P P    +L +SL + G+++ A+K M+
Sbjct: 425 TRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 148/327 (45%), Gaps = 5/327 (1%)

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M    C     +Y   +  L   G   +A E+  T + E   P+ +TY+V+++     G+
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 425 LSEACDVVREMVK-KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
             +A D+ + M + K   P     N LI  LC  G  +GA+K + E  +K  A NV  ++
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           S+I+   ++   EE+  +L++M     +PD   +  ++   +++  +E+A E+   M+  
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT----AYNQVIENLCSFGYLE 599
           G  P  V+Y  +IH   ++G++++ LK+L +M  +          ++ +I  LC  G LE
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           +A ++ G +L    K +  T   L+         + A ++  +M    + PD      + 
Sbjct: 241 KALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 300

Query: 660 ERLILEGKSEEADTLMLRFVERGHIQP 686
                 G  +EA+ L         +QP
Sbjct: 301 AGYCKRGSMDEAEKLYREMSGGAGLQP 327



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 17/281 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRN 194
           Y+ D + Y++++  L+K      + ++L  MA R     P    FS L+    R G+L  
Sbjct: 182 YKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEK 241

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ V   M +A   PN     T I  L    K+ +A    E+M  A I P+ + YN LI 
Sbjct: 242 ALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIA 301

Query: 255 GYCDLHRIKDAIKLIDEMPL-KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
           GYC    + +A KL  EM    G  P  V++ T++   CK  ++    +L+ +M     L
Sbjct: 302 GYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEM-GTKGL 360

Query: 314 FHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
             D               +++EA E+  QM +   + D V+  + V G C+ G +DQA  
Sbjct: 361 AADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYA 420

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           + +     G  PN  ++      L   G+  +A++++  ++
Sbjct: 421 VFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAK 461



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 3/180 (1%)

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            Y  ++ +L+K G + +A E+   M S+  VP++VTY  +I+  C  G     L L + M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 576 LSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
             +++    R  YN +I  LCS G  E A K+L ++      A+  T   +++S + +  
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
           P  +YKV   M      PD+     V +        E+A  +    VE G+       H+
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191


>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 245/504 (48%), Gaps = 26/504 (5%)

Query: 48  MVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLK 107
           + +  F ++ V     R  V++  E  + +V+ +C L       +  L+  L    ++L 
Sbjct: 50  IAIAQFHEHAVGISRNRPEVIQNPE--NWIVKVICTL----CVRTHSLDACLDYFSKTLT 103

Query: 108 PRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLM 167
           P     V+R   +  +AL+FF  +       H    Y  +L  LS+    + AK V   M
Sbjct: 104 PSIAFEVVRGLNNPELALKFFQLSRVNLNLCHSFRTYSFLLRSLSEMGFHESAKAVYDCM 163

Query: 168 ARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
              G         +L+ + + AGK   A   +       V  +L++ N  ++ LV GN++
Sbjct: 164 NIDGHSPDASVLGFLVSSATDAGKFNIARTWVD-----GVEFSLVVYNKLLNQLVRGNQV 218

Query: 228 AKALRFL-ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
            +A+ F  E+M L G   +  ++N LI+G C + ++  A +L +EM   GCSPD ++Y T
Sbjct: 219 DEAVCFFREQMGLHGPF-DSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNT 277

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ-------------GRIEEAKELVNQMSQM 333
           ++   C+   +    DL++++++ ++L  D              G++E+A  L N M   
Sbjct: 278 LINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISS 337

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  P+  T+  ++NGF +VG++  A+ M ++M   GC P+ +++T+ ++G C  GK   +
Sbjct: 338 GIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERS 397

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            ++ +       +PN  T++++ + L +E +L EA   +R++  +     P   N +I  
Sbjct: 398 LKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDG 457

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C+ G +D A   + E   K C  + + +T LI G C KG L EA+S+ + M      PD
Sbjct: 458 FCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPD 517

Query: 514 TVTYTTIIDALSKNGRVEEATELM 537
           ++T T++I  L K G   EA  +M
Sbjct: 518 SITMTSLISCLLKAGMPNEAYRIM 541



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 206/432 (47%), Gaps = 33/432 (7%)

Query: 230 ALRF--LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           AL+F  L R+ L  +  +  TY+ L++   ++   + A  + D M + G SPD     +V
Sbjct: 120 ALKFFQLSRVNL-NLCHSFRTYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDA----SV 174

Query: 288 MGYLCKEK----RIKEVRDLME----KMVNDSNLFHDQGRIEEAKELV----NQMSQMGC 335
           +G+L        +    R  ++     +V  + L +   R  +  E V     QM   G 
Sbjct: 175 LGFLVSSATDAGKFNIARTWVDGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGP 234

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH-----NGKS 390
             D  ++  ++ G CR+G++D+A ++  +M   GC P+ ++Y   +NG C       G  
Sbjct: 235 F-DSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHD 293

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
           L  +E+++ ++    +P+ +TY+ ++ G  + GK+ +A  +   M+  G  P     N+L
Sbjct: 294 L-LKELLSKND---LSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNIL 349

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I    + G M  A+   +E L  GC  +++ FTSLI G C+ G +E +L L  ++     
Sbjct: 350 INGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNL 409

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P+  T+  + +AL K  R+ EA   +  +  + +V     Y  VI  +C+ G V++   
Sbjct: 410 SPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANV 469

Query: 571 LLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           +L +M  +++C   +  Y  +I   C  G L EA  I  ++L T    D+ T   L+   
Sbjct: 470 ILAEM-EEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCL 528

Query: 628 LNKGIPLLAYKV 639
           L  G+P  AY++
Sbjct: 529 LKAGMPNEAYRI 540



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+  +Y  ++  Y + GK+  A  + + M  + + PN    N  I+       +  A   
Sbjct: 306 PDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENM 365

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
            E M L G  P+++T+  LI G+C   +++ ++KL  E+  +  SP++ ++  +   LCK
Sbjct: 366 YEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCK 425

Query: 294 EKRIKEVRDLMEKM--------------VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           E R+ E R  +  +              V D   F   G ++EA  ++ +M +  C PD 
Sbjct: 426 ENRLHEARGFLRDLKWRHIVAQPFMYNPVIDG--FCKAGNVDEANVILAEMEEKRCKPDK 483

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           +TYT ++ G C  G L +A  +  +M   GC P++++ T+ ++ L   G   EA  ++  
Sbjct: 484 ITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQI 543

Query: 400 SEEEW 404
           + E++
Sbjct: 544 ASEDF 548



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/174 (21%), Positives = 73/174 (41%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I +  +++   +T   + + ++   +  R +      F+ L  A  +  +L  A   L
Sbjct: 377 DIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFL 436

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             ++   +     + N  I        + +A   L  M+     P+ +TY  LI G+C  
Sbjct: 437 RDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMK 496

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
            R+ +AI + + M   GC+PD ++  +++  L K     E   +M+    D NL
Sbjct: 497 GRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASEDFNL 550


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 224/466 (48%), Gaps = 42/466 (9%)

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS--PDKVSYYTVMGYLCKEKRI 297
           A + P+V+TY  L+ G C   R+ DA++++D M  +     PD V+  TV+  LCK    
Sbjct: 166 ASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCK---- 221

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQ-MSQM-GCIPDVVTYTAVVNGFCRVGEL 355
                               GR++EA   V Q MS + GC P+ VTY  +++ FCRVG +
Sbjct: 222 -------------------SGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNI 262

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW--WTPNAITYS 413
             A +++++M + G   N V+    + GLC  G++  A E        W     NA+TYS
Sbjct: 263 SMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYS 322

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++  L     +  A ++  E + +G  P  +    +I  L + G+++ A          
Sbjct: 323 TLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEA 382

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G  ++   +  LI GFC+K  L EA  LL +M      PD  TY T++    K G     
Sbjct: 383 GFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAV 442

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIEN 591
            EL+ KM+  G  P+V+T+ T++H YC+VG++++ L++L  M           YN +I+ 
Sbjct: 443 DELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDF 502

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC  G ++ A ++  ++   +  A+ +T + L++   +K +P  A+++  +M      PD
Sbjct: 503 LCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPD 562

Query: 652 LKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRV 697
                 + E L + G+++     + RF+++G       EH   +R+
Sbjct: 563 YVTVDVLMEWLPVIGETDR----LKRFMQQG-------EHTASKRI 597



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 211/455 (46%), Gaps = 56/455 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   +  +L  L++ +   G  R+  LM +     RP+  +Y  L+    +AG++ +A+ 
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALM-QGCASVRPDVVTYGILVNGLCKAGRVGDALR 193

Query: 198 VLSMM--QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE-RMQ-LAGITPNVLTYNCLI 253
           VL  M  Q   + P+++  NT +  L    ++ +AL F+E RM  + G  PN +TYNCLI
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLI 253

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR-------IKEVRD---- 302
             +C +  I  A +L+++M  +G   + V+  T++G LC+  R        +E R     
Sbjct: 254 DAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPE 313

Query: 303 ----------LMEKMVNDSN------LFHDQ----------------------GRIEEAK 324
                     L+  +++ +N      LFH++                      GR+E+A 
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDAC 373

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            + + M + G   D   Y  ++ GFCR   L +A ++LQ+M   G +P+  +Y   L+G 
Sbjct: 374 SMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGS 433

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  G      E++    ++   P+ IT+  ++HG  + GK+ EA  ++R M + G  P  
Sbjct: 434 CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N LI  LC+ G +D A +   E   K    NV  F +L++G   K   E+A  L+D 
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           M   +  PD VT   +++ L   G  +     M +
Sbjct: 554 MREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 215/483 (44%), Gaps = 71/483 (14%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQK-AAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           AF+ ++ A +R   +     + ++MQ  A+V P+++     ++ L    ++  ALR L+ 
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDG 197

Query: 237 M--QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE--MPLKGCSPDKVSYYTVMGYLC 292
           M  Q   I P+V+T N ++ G C   R+++A+  +++    + GC P+ V+Y  ++   C
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC 257

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           +                        G I  A ELV +M   G   ++VT   +V G CR 
Sbjct: 258 R-----------------------VGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRA 294

Query: 353 GELDQAKKMLQQ---MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           G    A +  ++   ++  G K N V+Y+  +  L H      A E+ +    E  +P+A
Sbjct: 295 GRTGAALEFFREKRTVWPEG-KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDA 353

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           I Y  ++ GL + G+L +AC +   M + GF       N+LI   CR+ ++  A + +QE
Sbjct: 354 IMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQE 413

Query: 470 C-----------------------------------LNKGCAVNVVNFTSLIRGFCQKGD 494
                                               ++ GC  +V+ F +L+ G+C+ G 
Sbjct: 414 MKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGK 473

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           ++EAL +L  M      P+ V Y T+ID L K G V+ A EL  +M  K +   V T+  
Sbjct: 474 IDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNA 533

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV---IENLCSFGYLEEAGKILGKVLRT 611
           ++         E   +L+++M  +++C   Y  V   +E L   G  +   + + +   T
Sbjct: 534 LLKGLRDKNMPEKAFELMDQM-REERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHT 592

Query: 612 ASK 614
           ASK
Sbjct: 593 ASK 595



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 31/258 (12%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           ++  ++ D   Y +++    + K    A  +L+ M   GI  RP+  +Y  L+    +AG
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI--RPDVCTYNTLLSGSCKAG 437

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
                  +L  M      P+++   T +H      K+ +ALR L  M  +GI PN + YN
Sbjct: 438 DFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYN 497

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI   C    +  AI+L DEM  K   P  V+ +  +        +K +R         
Sbjct: 498 TLIDFLCKRGDVDLAIELFDEMKEKSV-PANVTTFNAL--------LKGLR--------- 539

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                D+   E+A EL++QM +  C PD VT   ++     +GE D+ K+ +QQ  H   
Sbjct: 540 -----DKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTAS 594

Query: 371 K----PNTVSYTAFLNGL 384
           K      T +Y  F  GL
Sbjct: 595 KRIVSDRTSAYFHFATGL 612


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 242/509 (47%), Gaps = 17/509 (3%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           +HD   Y ++  +L+++K+   A  +   +   GI    ++ + L+    +  + R  + 
Sbjct: 480 KHD-FSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTIN 538

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   + ++   P+  +   AI   V  + + K L    RM+   I+P V  YN LI G C
Sbjct: 539 VFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLC 598

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
            + ++KDA +L DEM  +   P  ++Y T++   CK+   ++   + E+M  D+      
Sbjct: 599 KVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLI 658

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                   LF   G +E+A+ ++ +M   G +PD  T++ + +G+    + D A  + + 
Sbjct: 659 TFNTLLKGLFK-AGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYET 717

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
               G K N  + +  LN LC  G+  +A E++     +   PN + Y+ ++ G  R+G 
Sbjct: 718 AVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGD 777

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L  A   +  M K+G  P  +  N LI++ C  G M+ A++ + +   KG + +V  +  
Sbjct: 778 LVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNI 837

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G+ +K + ++   LL +M      P+ V+Y T+I+ L K  ++ EA  +   M  +G
Sbjct: 838 LIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG 897

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAG 602
           + P V  Y  +I   C  G++ED  +  E+M  K  +     YN +I+ L   G L EA 
Sbjct: 898 VSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAE 957

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKG 631
            +L ++ R   K D  T + L+  Y   G
Sbjct: 958 DMLLEISRKGLKPDVFTYNSLISGYRFAG 986



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 220/448 (49%), Gaps = 15/448 (3%)

Query: 176  PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
            P  F Y  L+    +  ++++A  +   M    + P+L+  NT I          K+ + 
Sbjct: 585  PTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKV 644

Query: 234  LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
             ERM+   I P+++T+N L+KG      ++DA  ++ EM  +G  PD  ++  +      
Sbjct: 645  RERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSS 704

Query: 294  EKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
              +      + E  V+              N    +G+IE+A+E++ +    G +P+ V 
Sbjct: 705  NDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVL 764

Query: 342  YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
            Y  +++G+ R G+L  A+  +  M   G KP+ ++Y   +   C  G    A + +N  +
Sbjct: 765  YNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMK 824

Query: 402  EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
             +  +P+  TY++++ G  R+ +  +  D+++EM   G  P  V    LI  LC+  K+ 
Sbjct: 825  LKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLL 884

Query: 462  GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
             A+   ++  ++G + NV  +  LI G C KG +E+A    ++M+    + + VTY T+I
Sbjct: 885  EAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLI 944

Query: 522  DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-LSKQK 580
            D LS NG++ EA ++++++  KGL P V TY ++I  Y   G V+  + L E+M  S  K
Sbjct: 945  DGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIK 1004

Query: 581  CRTAYNQVIENLCSFGYLEEAGKILGKV 608
                   ++ +LC+   +E   KI G++
Sbjct: 1005 PTLKTYHLLISLCTKEGIELTKKIFGEM 1032



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 215/485 (44%), Gaps = 56/485 (11%)

Query: 142  IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
            I +  +L+ L K  + + A+ VL  M  +G       FS L   YS   K   A+ V   
Sbjct: 658  ITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYET 717

Query: 202  MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
               + +  N   C+  ++ L    ++ KA   L R    G+ PN + YN +I GY     
Sbjct: 718  AVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGD 777

Query: 262  IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
            +  A   ID M  +G  PD ++Y  ++   C                       + G +E
Sbjct: 778  LVGARMKIDAMEKQGMKPDHLAYNCLIRTFC-----------------------ELGDME 814

Query: 322  EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
             A++ VN+M   G  P V TY  ++ G+ R  E D+   +L++M  +G  PN VSY   +
Sbjct: 815  NAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLI 874

Query: 382  NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
            N LC   K LEA+ +    E+   +PN   Y++++ G   +GK+ +A     EM KKG  
Sbjct: 875  NCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIE 934

Query: 442  PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
               V  N LI  L   GK+  A+  + E   KG   +V  + SLI G+   G+++  ++L
Sbjct: 935  LNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIAL 994

Query: 502  LDDM----------------YLCKKD---------------PDTVTYTTIIDALSKNGRV 530
             ++M                 LC K+               PD + Y  ++   + +G +
Sbjct: 995  YEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDM 1054

Query: 531  EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQV 588
            ++A  L  +M+ K +     TY ++I    +VG++ ++  L+++M +++    A  Y+ +
Sbjct: 1055 DKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDII 1114

Query: 589  IENLC 593
            ++  C
Sbjct: 1115 VKGHC 1119



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 201/435 (46%), Gaps = 16/435 (3%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            D   + ++ +  S       A  V       G++      S L+ A  + G++  A  +L
Sbjct: 691  DAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEIL 750

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
                   + PN ++ NT I        L  A   ++ M+  G+ P+ L YNCLI+ +C+L
Sbjct: 751  GREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCEL 810

Query: 260  HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
              +++A + +++M LKG SP   +Y  ++G   ++    +  DL+++M ++         
Sbjct: 811  GDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSY 870

Query: 312  ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                N      ++ EA+ +   M   G  P+V  Y  +++G C  G+++ A +  ++M+ 
Sbjct: 871  GTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFK 930

Query: 368  HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
             G + N V+Y   ++GL  NGK  EA +M+     +   P+  TY+ ++ G R  G +  
Sbjct: 931  KGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQR 990

Query: 428  ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
               +  EM   G  PT    +LLI SLC +  ++  KK   E        +++ +  ++ 
Sbjct: 991  CIALYEEMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEM---SLQPDLLVYNGVLH 1046

Query: 488  GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
             +   GD+++A +L   M       D  TY ++I    K G++ E   L+ +M ++ + P
Sbjct: 1047 CYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEP 1106

Query: 548  TVVTYRTVIHRYCQV 562
               TY  ++  +C++
Sbjct: 1107 EADTYDIIVKGHCEM 1121



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 183/399 (45%), Gaps = 45/399 (11%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           EL N+M      P V  Y  +++G C+V ++  A+++  +M      P+ ++Y   ++G 
Sbjct: 573 ELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGY 632

Query: 385 CHNG---KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           C +G   KS + RE +     E   P+ IT++ ++ GL + G + +A +V+ EM  +GF 
Sbjct: 633 CKDGNPEKSFKVRERMKADNIE---PSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFV 689

Query: 442 P--------------------------TPVEINL---------LIQSLCREGKMDGAKKF 466
           P                          T V+  L         L+ +LC+EG+++ A++ 
Sbjct: 690 PDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEI 749

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           +   + KG   N V + ++I G+ +KGDL  A   +D M      PD + Y  +I    +
Sbjct: 750 LGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCE 809

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC---QVGRVEDLLKLLEKMLSKQKCRT 583
            G +E A + + KM  KG+ P+V TY  +I  Y    +  +  DLLK +E   +      
Sbjct: 810 LGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNV-V 868

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
           +Y  +I  LC    L EA  +   +       +    ++L++   +KG    A++ +  M
Sbjct: 869 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEM 928

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           F + +  +L     + + L + GK  EA+ ++L    +G
Sbjct: 929 FKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKG 967



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 89/413 (21%), Positives = 177/413 (42%), Gaps = 27/413 (6%)

Query: 138  RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
            + D + Y  ++    +    + A++ +  M  +G+    E ++ L+  Y R  +      
Sbjct: 794  KPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 853

Query: 198  VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            +L  M+     PN++   T I+ L  G+KL +A      M+  G++PNV  YN LI G C
Sbjct: 854  LLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCC 913

Query: 258  DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               +I+DA +  +EM  KG   + V+Y T++  L                          
Sbjct: 914  SKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSM-----------------------N 950

Query: 318  GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            G++ EA++++ ++S+ G  PDV TY ++++G+   G + +   + ++M   G KP   +Y
Sbjct: 951  GKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTY 1010

Query: 378  TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
               ++     G  L  +     S      P+ + Y+ V+H     G + +A ++ ++M++
Sbjct: 1011 HLLISLCTKEGIELTKKIFGEMS----LQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIE 1066

Query: 438  KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            K         N LI    + GK+   +  + E   +        +  +++G C+  D   
Sbjct: 1067 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMG 1126

Query: 498  ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
            A     +M       D      ++  L +  R +EA  ++ +M  + L   +V
Sbjct: 1127 AYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRKLGDVIV 1179



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 2/175 (1%)

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P + + T ++D L K  +      + + +L     P+   Y   I    ++  V   L+L
Sbjct: 515 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 574

Query: 572 LEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
             +M   +   T   YN +I+ LC    +++A ++  ++L         T + L++ Y  
Sbjct: 575 FNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCK 634

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
            G P  ++KV  RM   N+ P L     + + L   G  E+A+ ++    ++G +
Sbjct: 635 DGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFV 689


>gi|359488082|ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Vitis vinifera]
          Length = 498

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 211/429 (49%), Gaps = 25/429 (5%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GKL NA  ++ +M +    P    C   I  L+      +A R L+ M ++G  P+++TY
Sbjct: 53  GKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIITY 112

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N L+ G C    +K AI+L+DEM L GC PD ++Y T++                     
Sbjct: 113 NMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTIL--------------------- 151

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                 D G  ++A        + GC   ++TYT ++   C+     QA ++L+ M   G
Sbjct: 152 --RCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEG 209

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
           C P+ V+Y + +N  C  GK  +   +I         PN +TY+ ++H L   G   E  
Sbjct: 210 CYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVD 269

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           +++  M      PT V  N+LI  LC+ G +D A  F  + ++  C  +++ + +L+   
Sbjct: 270 EILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAAL 329

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C++G ++EAL LL  +   +  P  +TY  +ID L+K G +E+A EL  +M+ +G  P  
Sbjct: 330 CKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDD 389

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK--CRTAYNQVIENLCSFGYLEEAGKILGK 607
           +T+RT+     ++  VED L +L++M  + +    +A+  VI  LC    ++ A ++L  
Sbjct: 390 ITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEM 449

Query: 608 VLRTASKAD 616
           ++ +  K +
Sbjct: 450 MVSSQCKPN 458



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 194/395 (49%), Gaps = 16/395 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A RVL++M   G    P+  +Y M+     + G L+ A+ +L  M  +   P+ +  NT 
Sbjct: 93  ATRVLKIMVMSG--GIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTI 150

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +  +       +A+ F +     G    ++TY  LI+  C       A++++++M ++GC
Sbjct: 151 LRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGC 210

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKE 325
            PD V+Y +++ Y CK+ + ++   ++  +         V  + L H     G  +E  E
Sbjct: 211 YPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDE 270

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++  M+     P VVTY  ++NG C+ G LD+A     QM  H C P+ ++Y   L  LC
Sbjct: 271 ILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALC 330

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   EA  ++++  +   +P  ITY++V+ GL ++G + +A ++  EM+++GF P  +
Sbjct: 331 KEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDI 390

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               L   L R   ++ A   ++E   +   +    F  +I G C+K  ++ A+ +L+ M
Sbjct: 391 THRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMM 450

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
              +  P+   Y+ II  +   G +EEA +L  K+
Sbjct: 451 VSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKL 485



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 167/338 (49%), Gaps = 4/338 (1%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G++  A  L++ M++   IP   +   ++ G  ++   ++A ++L+ M   G  P+ ++
Sbjct: 52  KGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIIT 111

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   + GLC  G    A E+++        P+AITY+ ++  +   G   +A    ++ +
Sbjct: 112 YNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQL 171

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +KG     +   +LI+ +C+      A + +++   +GC  ++V + SL+   C++G  E
Sbjct: 172 RKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYE 231

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +   ++ ++      P+TVTY T++ +L  +G  +E  E+++ M +    PTVVTY  +I
Sbjct: 232 DTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILI 291

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +  C+ G ++  +   ++M+S   C      YN ++  LC  G ++EA  +L  +  T  
Sbjct: 292 NGLCKYGLLDRAINFFDQMVS-HNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRC 350

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
                T +++++    KG    A ++   M  R   PD
Sbjct: 351 SPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPD 388



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 157/344 (45%), Gaps = 2/344 (0%)

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           T   ++   C  G+L  A +++  M      P   S    + GL     +  A  ++   
Sbjct: 41  TNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIM 100

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
                 P+ ITY++++ GL ++G L  A +++ EM   G  P  +  N +++ +   G  
Sbjct: 101 VMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGF 160

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D A  F ++ L KGC   ++ +T LI   C+     +A+ +L+DM +    PD VTY ++
Sbjct: 161 DQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSL 220

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE--DLLKLLEKMLSK 578
           ++   K G+ E+   ++  +LS G+ P  VTY T++H  C  G  +  D + L+    S+
Sbjct: 221 VNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQ 280

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
                 YN +I  LC +G L+ A     +++      D  T + L+ +   +G+   A  
Sbjct: 281 PPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALH 340

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +   + +    P L     V + L  +G  E+A  L    +ERG
Sbjct: 341 LLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERG 384



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 152/359 (42%), Gaps = 62/359 (17%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY-LMVAYS-RAGKLRNAMYVL 199
           I Y +++E++ K      A  VL  MA  G  C P+  +Y  +V Y+ + GK  +   ++
Sbjct: 180 ITYTVLIELVCKHCGTVQAMEVLEDMAIEG--CYPDIVTYNSLVNYTCKQGKYEDTALII 237

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +    + PN +  NT +H L       +    L  M      P V+TYN LI G C  
Sbjct: 238 YNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKY 297

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             +  AI   D+M    C PD ++Y T++  LCKE                       G 
Sbjct: 298 GLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKE-----------------------GM 334

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++EA  L++ ++   C P ++TY  V++G  + G +++A ++  +M   G  P+ +++  
Sbjct: 335 VDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRT 394

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
                                   +W            GL R   + +A  +++EM K+ 
Sbjct: 395 L-----------------------FW------------GLFRLDLVEDALVILKEMNKRN 419

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
                     +I  LC++ K+D A + ++  ++  C  N   ++++I+G    G +EEA
Sbjct: 420 QRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYSAIIKGVGAAGMIEEA 478


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 239/503 (47%), Gaps = 21/503 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y ++++   K +  + A   LR M   G    P A+S ++ ++ + G +  AM V + 
Sbjct: 45  VSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAE 104

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M      P+++  N  +  L    K+ +A      M   G  P+V+TYN +I G C   +
Sbjct: 105 MPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKK 164

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
           + +A+ L++ M  +  SP  V+Y T++ +LCK  R+++  ++ EKM              
Sbjct: 165 LDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSV 224

Query: 312 --NLFHDQGRIEEAKELVNQMSQMG-CIPDVVTYTAVVNGFCRV-GELDQAKKMLQQMYH 367
             N     G++ EA  + + M +   C+ D  TY+ VV G  ++ G   +A K++ +M  
Sbjct: 225 LFNKLQRAGKLVEASRVYSDMCRKNVCMTD-NTYSLVVLGLSKMDGGNVEAAKLVTEMMG 283

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
               P+  +Y+  +NGLC   +  EA+EM         +P  +TY+ ++ GL    KL +
Sbjct: 284 KKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQD 343

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A ++   M+ +G  P     NL+I+  C  G  + A    Q+ +  G  +N   +  +I 
Sbjct: 344 AMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIV 403

Query: 488 GFCQKGDLEEALSLLDDMYLCKKD----PDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           GF +      A  L   M   K D    P+  TY  +I +L K  +VEEA +L+  M  K
Sbjct: 404 GFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDK 463

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEA 601
           G VP++  +  ++ R  + GR++D  +L ++M  ++ Q+   + N +++ +   G ++EA
Sbjct: 464 GFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEA 523

Query: 602 GKILGKVLRTASKADASTCHVLV 624
              L ++  T    D  T   LV
Sbjct: 524 KDFLKQMTDTGIVPDKFTYDKLV 546



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 229/495 (46%), Gaps = 32/495 (6%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +A + PN ++ N  I  L     LA+A  +L+RM      PNV++YN +I GYC    
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARN 59

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSN 312
           I+ A+  + EM   G  P   +Y +++   CK   + +  D+  +M         VN + 
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 313 LFHDQGR---IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L     R   I EA+EL   M+  GC PDVVTY  ++ G C+  +LD+A  +L++M    
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             P  V+YT  ++ LC   +  +A E+     E         YSV+ + L+R GKL EA 
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDG----AKKFMQECLNKGCAVNVVNFTSL 485
            V  +M +K    T    +L++  L    KMDG    A K + E + K  A +   ++ L
Sbjct: 240 RVYSDMCRKNVCMTDNTYSLVVLGL---SKMDGGNVEAAKLVTEMMGKKIAPDFYAYSIL 296

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G C+     EA  +  +M      P  VTY T+++ L    ++++A EL   ML +G 
Sbjct: 297 INGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGR 356

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEE----A 601
           +P   +Y  +I  +C  G   +   L + M+   K     N    N    G++++    +
Sbjct: 357 LPDTCSYNLMIRGFCANGDTNEAYCLFQDMI---KDGIVLNTWTYNFMIVGFIKDEAWSS 413

Query: 602 GKILGKVLRTASK-----ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
             +L K +++         +  T  +L+ S         A+K+   M ++  +P LK+ +
Sbjct: 414 AWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWE 473

Query: 657 KVSERLILEGKSEEA 671
            +  RL   G+ ++A
Sbjct: 474 VLLSRLARAGRLDDA 488



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/521 (23%), Positives = 225/521 (43%), Gaps = 21/521 (4%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           P  Y  +++   KT     A  V   M  +G E     F+ L+    RA K+  A  +  
Sbjct: 79  PHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFR 138

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M      P+++  NT I  L    KL +A+  LERM+   ++P  +TY  LI   C   
Sbjct: 139 SMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFT 198

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-----NLFH 315
           R++ A ++ ++M    C+  + +Y  +   L +  ++ E   +   M   +     N + 
Sbjct: 199 RLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYS 258

Query: 316 ---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                    D G +E AK LV +M      PD   Y+ ++NG C+     +AK+M Q+M 
Sbjct: 259 LVVLGLSKMDGGNVEAAK-LVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMR 317

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  P  V+Y   L GL    K  +A E+     ++   P+  +Y++++ G    G  +
Sbjct: 318 GRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTN 377

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK---KFMQECLN-KGCAVNVVNF 482
           EA  + ++M+K G        N +I    ++     A    K MQ   N K  A N+  +
Sbjct: 378 EAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTY 437

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
             LI   C+   +EEA  LL  M      P    +  ++  L++ GR+++A EL  +M  
Sbjct: 438 EILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSR 497

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEE 600
                 V +   ++    + G V++    L++M        +  Y++++  LC  G  ++
Sbjct: 498 INCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQ 557

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
           A K++ +++R   + +      L+ +   +G    AY+  C
Sbjct: 558 ARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYC 598



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 168/358 (46%), Gaps = 4/358 (1%)

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M + G  P+ + Y  +++  C+ G L +A+  L++M  H C PN VSY   ++G C    
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 59

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A   +   EE    P    YS ++    + G +S+A DV  EM  KG  P  V  N+
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L+  L R  K+  A++  +   ++GC  +VV + ++I G C+   L+EA+ LL+ M    
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P  VTYTT+ID L K  R+++A E+  KM       T   Y  + ++  + G++ +  
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239

Query: 570 KLLEKMLSKQKCRT--AYNQVIENLCSF-GYLEEAGKILGKVLRTASKADASTCHVLVES 626
           ++   M  K  C T   Y+ V+  L    G   EA K++ +++      D     +L+  
Sbjct: 240 RVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILING 299

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
                 P  A ++   M  R + P +     + E L+   K ++A  L    +++G +
Sbjct: 300 LCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRL 357



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 96/427 (22%), Positives = 173/427 (40%), Gaps = 58/427 (13%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR--AGKLRNAMYVLS 200
            Y ++   L +      A RV   M R+ +      +S +++  S+   G +  A  V  
Sbjct: 221 AYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTE 280

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           MM K  +AP+    +  I+ L    +  +A    + M+  GI+P V+TYN L++G     
Sbjct: 281 MMGKK-IAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTA 339

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------- 311
           +++DA++L   M  +G  PD  SY  ++   C      E   L + M+ D          
Sbjct: 340 KLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYN 399

Query: 312 ---------------------------------NLFHDQ---------GRIEEAKELVNQ 329
                                            N+F  +          ++EEA +L++ 
Sbjct: 400 FMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSA 459

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M   G +P +  +  +++   R G LD A ++ ++M    C+    S    L+G+   G 
Sbjct: 460 MRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGS 519

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             EA++ +    +    P+  TY  ++ GL  +GK  +A  +V E+V+ G  P    +  
Sbjct: 520 VDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQ 579

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L+ +LC +G   GA +F     + G  V +    +L+   C    L   L  LD +   +
Sbjct: 580 LLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCC----LARKLDYLDMIEQRE 635

Query: 510 KDPDTVT 516
             PD + 
Sbjct: 636 GVPDVIV 642


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 230/486 (47%), Gaps = 25/486 (5%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L  L K K    A  + + M   GIE     F+ L+  +S+ G    +  + + + K  
Sbjct: 67  ILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKG 126

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
             P  +  NT I  L +   + +AL F +++   G   + ++Y  LI G C + RI  A+
Sbjct: 127 YHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAAL 186

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKEL 326
           +L+  +  K   P+ V Y  ++  +CK K + +  DL  +MV              AK +
Sbjct: 187 QLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV--------------AKRI 232

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
                     PDV TY A+++GF  V +L+ A  +  +M      PN  ++   ++G C 
Sbjct: 233 C---------PDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCK 283

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            GK  +A+ ++    ++   P+ +TY+ +M G     K+++A D+   M   G       
Sbjct: 284 EGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQI 343

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
              ++   C+   +D A    +E   +    NVV ++SLI G C+ G +  AL L+D+M+
Sbjct: 344 YTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMH 403

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
              + P+ VTY++I+DAL KN  V++A  L+  +  +G+ P + TY  +I   CQ GR+E
Sbjct: 404 DRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLE 463

Query: 567 DLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           D   + E +L K       AY  +I+  C  G+ ++A  +L K+       +A T  +++
Sbjct: 464 DAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVI 523

Query: 625 ESYLNK 630
            S   K
Sbjct: 524 LSLFEK 529



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 236/499 (47%), Gaps = 21/499 (4%)

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           ++ K    P     N  +  LV     + AL   ++M+L GI  +  T+N LI  +  L 
Sbjct: 52  LLHKNPTPPTFQF-NKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLG 110

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH-DQ-- 317
               +  +  ++  KG  P  +++ T++  LC +  I +     +K+V     FH DQ  
Sbjct: 111 LNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQG--FHLDQVS 168

Query: 318 -----------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                      GRI  A +L+ ++      P+ V Y  +++  C+   ++ A  +  QM 
Sbjct: 169 YGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV 228

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                P+  +Y A ++G     K   A ++ N  ++E   PN  T+++++ G  +EGK++
Sbjct: 229 AKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVN 288

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A  V+  M+K    P  V  N L+   C   K++ AK       + G   NV  +T+++
Sbjct: 289 DAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMV 348

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            GFC+   ++EA++L ++M   K  P+ VTY+++ID L K GR+  A +L+ +M  +G  
Sbjct: 349 NGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQP 408

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGK 603
           P +VTY +++   C+   V+  + LL   L  Q  R     Y  +I+ LC  G LE+A  
Sbjct: 409 PNIVTYSSILDALCKNHHVDKAIALLTN-LKDQGIRPDMYTYTILIKGLCQSGRLEDAQN 467

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           +   +L      D     V+++ + +KG    A  +  +M +   IP+ K  + V   L 
Sbjct: 468 VFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLF 527

Query: 664 LEGKSEEADTLMLRFVERG 682
            + +++ A+ L+   + RG
Sbjct: 528 EKDENDTAEKLLREMIVRG 546



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 208/424 (49%), Gaps = 33/424 (7%)

Query: 133 RQWRYRHDPIVYY-MMLEILSKTKLCQGAKRVLRLMAR-------RGIECRPEAFSYLMV 184
            Q  + HD +V     L+ +S   L  G  +V R+ A         G   +P A  Y M+
Sbjct: 148 HQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMI 207

Query: 185 AYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
             +  +A  + +A  + S M    + P++   N  I      +KL  A+    +M+   I
Sbjct: 208 IDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENI 267

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
            PNV T+N L+ G+C   ++ DA  ++  M      PD V+Y ++M   C          
Sbjct: 268 NPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCS--------- 318

Query: 303 LMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                +N         ++ +AK++ + M+  G I +V  YT +VNGFC++  +D+A  + 
Sbjct: 319 -----IN---------KVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLF 364

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           ++M      PN V+Y++ ++GLC  G+   A ++++   +    PN +TYS ++  L + 
Sbjct: 365 EEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKN 424

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
             + +A  ++  +  +G  P      +LI+ LC+ G+++ A+   ++ L KG  ++V  +
Sbjct: 425 HHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAY 484

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           T +I+GFC KG  ++AL+LL  M      P+  TY  +I +L +    + A +L+ +M+ 
Sbjct: 485 TVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIV 544

Query: 543 KGLV 546
           +GL+
Sbjct: 545 RGLL 548



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 97/230 (42%), Gaps = 10/230 (4%)

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAK--------KFMQECLNKGCAVNVVNFTS 484
           R +V   F P P  I L   S+    ++   +         F    L+K        F  
Sbjct: 7   RYVVISNFTPNPNFIGLFPSSIRLFSQLHHKQDEENNLISSFNHLLLHKNPTPPTFQFNK 66

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           ++    +      ALSL   M L   + D  T+  +I+  S+ G    +  +  K+L KG
Sbjct: 67  ILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKG 126

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAG 602
             PT +T+ T+I   C  G +   L   +K++++     + +Y  +I  LC  G +  A 
Sbjct: 127 YHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAAL 186

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           ++L +V     + +A   ++++++     +   A+ +  +M  + + PD+
Sbjct: 187 QLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDV 236


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 229/487 (47%), Gaps = 17/487 (3%)

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
           + LM  Y    ++R A+ +     +  + P  +     I          KA     +M+ 
Sbjct: 286 TTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRD 345

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
            G+ P+   +N +IKG  +    KDA+ L  EM   G  PD  +Y  ++ +LC+ ++I+E
Sbjct: 346 HGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIRE 404

Query: 300 VRDLMEKMVNDSNL------FHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
             +L EKM N++ +      +H         G ++EA +L  +M   G  P+VVTYT ++
Sbjct: 405 ALNLWEKM-NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLM 463

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
            G       D+A  +L +M  +G   N  +Y   +NGLC  G+  E  EM+   E E + 
Sbjct: 464 KGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFV 523

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P A+TY+ +++G  + G +  A  V ++M  KG  P  V     I   C+    D A K 
Sbjct: 524 PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKM 583

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           + +   KG   ++  + SLI GFCQ+G++  AL +L  M      P+   Y + I     
Sbjct: 584 LNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKN 643

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTA 584
              +EEA  L  KM+ +G+     TY T+I  + + G V   LKL  +M++K        
Sbjct: 644 LKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHIT 703

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           +  +   LC  G +++A K+L ++ R   + +    ++L+  YL  G    A+++   M 
Sbjct: 704 FTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEML 763

Query: 645 NRNLIPD 651
            R ++PD
Sbjct: 764 ERKIMPD 770



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 229/474 (48%), Gaps = 14/474 (2%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           Q + R AL  F    R      D + Y +++   ++  + + A  + R M   G+     
Sbjct: 295 QREVRKALDIFEETLRDGLVPTD-VTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            F+ ++         ++A+ +   M  + + P+    N  IH L    K+ +AL   E+M
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKM 412

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G+ P ++TY+ L+  YC    + +A+KL  EMP KG +P+ V+Y T+M     +   
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472

Query: 298 KEVRDLMEKMVNDSNLFHDQ------------GRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            +   L+ +M  +    +D             GR+ E  E++ +    G +P  +TY ++
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           +NGF + G +  A  + QQM   G  PN V+YT+F++G C       A +M+N    +  
Sbjct: 533 INGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGL 592

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+   Y+ ++ G  +EG +S A  V+  M+K G  P     N  I        M+ A +
Sbjct: 593 RPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALR 652

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             ++ + +G  ++   +T+LI GF + G++  AL L  +M      PD +T+T +   L 
Sbjct: 653 LYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLC 712

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +NG +++A +L+ +M    + P V+ Y  +I+ Y + G++++  +L ++ML ++
Sbjct: 713 RNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERK 766



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 209/427 (48%), Gaps = 17/427 (3%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY--SRAGKLRNAMYVLSM 201
           + M+++ L   KL + A  + + MA  GI   P+AF+Y ++ +   +  K+R A+ +   
Sbjct: 355 FNMVIKGLLNDKLWKDAVSLFKEMADSGI---PDAFTYNILIHWLCQRRKIREALNLWEK 411

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  V P ++  ++ +    V   + +A++    M   G TPNV+TY  L+KG+ +   
Sbjct: 412 MNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAA 471

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
              A  L+ EM   G S +  +Y T++  LC   R+ EV +++++   +           
Sbjct: 472 FDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNS 531

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             N F   G +  A  +  QM   G  P++VTYT+ ++G+C+    D A KML  +   G
Sbjct: 532 IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG 591

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            +P+  +Y + + G C  G    A +++    ++   PN   Y+  + G +    + EA 
Sbjct: 592 LRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            +  +M+K+G          LI    ++G +  A K   E + KG   + + FT+L  G 
Sbjct: 652 RLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGL 711

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ GD+++A  LLD+M      P+ + Y  +I+   +NG+++EA  L  +ML + ++P  
Sbjct: 712 CRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDD 771

Query: 550 VTYRTVI 556
            TY  ++
Sbjct: 772 TTYDILV 778



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 151/563 (26%), Positives = 241/563 (42%), Gaps = 123/563 (21%)

Query: 184 VAYSRAGKLRNA---MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
           VA +   KLR+A   + VL  MQ A   P     N+ + VLV G ++ +AL   + +   
Sbjct: 217 VAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLAT 276

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE- 299
           G   +V+    L+ GYC    ++ A+ + +E    G  P  V+ YTV+   C E+ + E 
Sbjct: 277 GKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVT-YTVLIRGCTEEGMPEK 335

Query: 300 -------VRD------------LMEKMVNDS------NLFH---DQG------------- 318
                  +RD            +++ ++ND       +LF    D G             
Sbjct: 336 AYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHW 395

Query: 319 -----RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                +I EA  L  +M++ G  P +VTY +++  +C  G +D+A K+  +M   G  PN
Sbjct: 396 LCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPN 455

Query: 374 TVSYTAFL-----------------------------------NGLCHNGKSLEAREMIN 398
            V+YT  +                                   NGLC  G+  E  EM+ 
Sbjct: 456 VVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLK 515

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
             E E + P A+TY+ +++G  + G +  A  V ++M  KG  P  V     I   C+  
Sbjct: 516 RFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTS 575

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD------------------------ 494
             D A K + +   KG   ++  + SLI GFCQ+G+                        
Sbjct: 576 CCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYN 635

Query: 495 -----------LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
                      +EEAL L + M     D DT TYTT+ID  SK+G V  A +L  +M++K
Sbjct: 636 SFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAK 695

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEA 601
           G +P  +T+  + H  C+ G ++D  KLL++M  L  +     YN +I      G L+EA
Sbjct: 696 GNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEA 755

Query: 602 GKILGKVLRTASKADASTCHVLV 624
            ++  ++L      D +T  +LV
Sbjct: 756 FRLHDEMLERKIMPDDTTYDILV 778



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 129/545 (23%), Positives = 232/545 (42%), Gaps = 48/545 (8%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F  +M A  + G   +A+ +   M  + + P+  +C+ AI  L       +AL  L +MQ
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
            AG  P   T+N ++       R+++A+ + DE+   G     V   T+M   C ++ ++
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 299 EVRDLMEKMVNDSNLFHD------------QGRIEEAKELVNQMSQMGC----------- 335
           +  D+ E+ + D  +  D            +G  E+A EL  QM   G            
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359

Query: 336 -----------------------IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                                  IPD  TY  +++  C+  ++ +A  + ++M   G KP
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKP 419

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
             V+Y + L   C NG   EA ++      + +TPN +TY+ +M G   +    +A  ++
Sbjct: 420 YIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALL 479

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            EM + G        N LI  LC  G++    + ++    +G     + + S+I GF + 
Sbjct: 480 AEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKA 539

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G +  A ++   M      P+ VTYT+ ID   K    + A +++  +  KGL P +  Y
Sbjct: 540 GMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAY 599

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLR 610
            ++I  +CQ G +   L++L  ML        + YN  I    +   +EEA ++  K+++
Sbjct: 600 NSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIK 659

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                D +T   L++ +   G    A K+   M  +  IPD      ++  L   G  ++
Sbjct: 660 EGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDD 719

Query: 671 ADTLM 675
           A  L+
Sbjct: 720 ARKLL 724



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 68/147 (46%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
           VY   +      K+ + A R+   M + GI+     ++ L+  +S+ G +  A+ + S M
Sbjct: 633 VYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEM 692

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
                 P+ +      H L     +  A + L+ M    I PNVL YN LI GY    ++
Sbjct: 693 VAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKL 752

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           ++A +L DEM  +   PD  +Y  ++G
Sbjct: 753 QEAFRLHDEMLERKIMPDDTTYDILVG 779



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 3/220 (1%)

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           +A  + VVM    +EG   +A  +  EM      P     ++ I SLC+    + A   +
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
           ++  + G       F S++    + G +EEAL + D++    K    V  TT++      
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAY 585
             V +A ++  + L  GLVPT VTY  +I    + G  E   +L  +M           +
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           N VI+ L +    ++A  +  K +  +   DA T ++L+ 
Sbjct: 356 NMVIKGLLNDKLWKDAVSLF-KEMADSGIPDAFTYNILIH 394



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 98/219 (44%), Gaps = 8/219 (3%)

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E   KG  ++   F  ++R   ++G  ++A+ L D+M   + +PD    +  I +L K  
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV 588
               A  ++ KM   G VP   T+ +V+    + GR+E+ L + +++L+  K     + V
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGK---KMSVV 283

Query: 589 IENLCSFGY-----LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
           +      GY     + +A  I  + LR        T  VL+     +G+P  AY++  +M
Sbjct: 284 LATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM 343

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +  L+P       V + L+ +   ++A +L     + G
Sbjct: 344 RDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG 382



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 64/143 (44%)

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM  KG        ++++++  +EG  D A +   E        +    +  I   C+  
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           D   AL +L  M      P   T+ +++D L K GR+EEA  +  ++L+ G   +VV   
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 554 TVIHRYCQVGRVEDLLKLLEKML 576
           T++H YC    V   L + E+ L
Sbjct: 287 TLMHGYCLQREVRKALDIFEETL 309


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/545 (25%), Positives = 246/545 (45%), Gaps = 58/545 (10%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y ++ +VY+++     K+   + A  V R+M   G+      +S LMVA+ +   +   +
Sbjct: 161 YTYNGLVYFLV-----KSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 215

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           ++L  M+   V PN+      I VL    +  +A R L +M+  G  P+V+T+  LI+  
Sbjct: 216 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 275

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           CD  RI DA  +  +M      PD+V+Y T++         + V ++   M  D   ++D
Sbjct: 276 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG--YND 333

Query: 317 Q--------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                          GR+ EA E+ ++M Q G +P+  +Y ++++GF +      A ++ 
Sbjct: 334 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 393

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           + M  HG KPN  ++  F+N    +G+S++A +     + +   P+ +  + V+ GL + 
Sbjct: 394 KHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 453

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G+L  A  V  E+   G  P  +   ++I+   +  K D A K   + +   C  +V+  
Sbjct: 454 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAV 513

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            SLI    + G  +EA  +   +     +P   TY T++  L + G+V+E   L+ +M  
Sbjct: 514 NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 573

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVI----------- 589
               P ++TY T++   C+ G V D L +L  M +K      ++YN VI           
Sbjct: 574 SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE 633

Query: 590 ----------------ENLCS-------FGYLEEAGKILGK-VLRTASKADASTCHVLVE 625
                             LC+        G ++EA  I+    L+  SK D S+CH L+E
Sbjct: 634 AFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLME 693

Query: 626 SYLNK 630
             L K
Sbjct: 694 GILKK 698



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 146/628 (23%), Positives = 267/628 (42%), Gaps = 54/628 (8%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           +   LRS      AL+ F  A R+ R  H       MLE++           V  +M R+
Sbjct: 60  VIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ 119

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
            ++     F+ +       G LR+A   L +M++A +  N    N  ++ LV      +A
Sbjct: 120 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREA 179

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           L     M + G+ P+V TY+ L+  +     ++  + L+ EM   G  P+  SY   +  
Sbjct: 180 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 239

Query: 291 LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPD 338
           L + KR  E   ++ KM N+              +  D GRI +AK++  +M +    PD
Sbjct: 240 LGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 299

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            VTY  +++ F   G+     ++   M   G   N V+YTA ++ LC  G+  EA EM +
Sbjct: 300 RVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFD 359

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE------------------------ 434
             +++   P   +Y+ ++ G  +  +  +A ++ +                         
Sbjct: 360 EMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSG 419

Query: 435 -----------MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
                      M  KG  P  V  N ++  L + G++  AK+   E    G + + + +T
Sbjct: 420 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 479

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            +I+   +    +EA+ +  DM      PD +   ++ID L K GR +EA  +  ++   
Sbjct: 480 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM 539

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEA 601
            L PT  TY T++    + G+V++++ LLE+M           YN +++ LC  G + +A
Sbjct: 540 NLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDA 599

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
             +L  +       D S+ + ++   + +     A+ + C+M  + LIPD      +   
Sbjct: 600 LDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPS 658

Query: 662 LILEGKSEEADTLMLRFVERGHIQPKSE 689
            +  G  +EA    L  ++   +QP S+
Sbjct: 659 FVKIGLMKEA----LHIIKDYFLQPGSK 682



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/557 (24%), Positives = 239/557 (42%), Gaps = 55/557 (9%)

Query: 147  MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
            +++ L K      A R+   +    +E     ++ L+    R GK++  M++L  M  + 
Sbjct: 516  LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN 575

Query: 207  VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG----------- 255
              PNL+  NT +  L     +  AL  L  M   G  P++ +YN +I G           
Sbjct: 576  YPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAF 635

Query: 256  --YCDLHRI---------------------KDAIKLIDEMPLK-GCSPDKVSYYTVMGYL 291
              +C + ++                     K+A+ +I +  L+ G   D+ S +++M  +
Sbjct: 636  SIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGI 695

Query: 292  CKEKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKELVNQMSQMGCIPDV 339
             K+  I++  +  E + +      D            Q +  EA ELV +    G     
Sbjct: 696  LKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKT 755

Query: 340  VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
              Y +++ G      +D A+ +  +M   GC P+  +Y   L+ +   GKS+   EM+  
Sbjct: 756  GLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM---GKSMRIEEMLKV 812

Query: 400  SEE---EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
             EE   + +    +TY+ ++ GL +  +L +A D+   ++ +GF PTP     L+  L +
Sbjct: 813  QEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLK 872

Query: 457  EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
             G+++ A+    E L  GC  N   +  L+ G    G+ E+   L  DM     +PD  +
Sbjct: 873  AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKS 932

Query: 517  YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
            YT IID L K G++ +      ++L  GL P ++TY  +I    +  R+E+ + L  +M 
Sbjct: 933  YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 992

Query: 577  SKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
             K        YN +I +L   G   EAGK+  ++L    K +  T + L+  Y   G   
Sbjct: 993  KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1052

Query: 635  LAYKVACRMFNRNLIPD 651
             AY    RM     +P+
Sbjct: 1053 SAYAAYGRMIVGGCLPN 1069



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 150/327 (45%), Gaps = 17/327 (5%)

Query: 210  NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
            N LIC      LV  N +  A      M+  G  P+  TYN L+       RI++ +K+ 
Sbjct: 759  NSLICG-----LVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQ 813

Query: 270  DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQ 317
            +EM  KG     V+Y T++  L K +R+++  DL   +++              +     
Sbjct: 814  EEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKA 873

Query: 318  GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            GRIE+A+ L N+M + GC  +   Y  ++NG    G  ++   + Q M   G  P+  SY
Sbjct: 874  GRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSY 933

Query: 378  TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
            T  ++ LC  G+  +         E    P+ ITY++++ GL +  +L EA  +  EM K
Sbjct: 934  TIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQK 993

Query: 438  KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            KG  P     N LI  L + GK   A K  +E L KG   NV  + +LIRG+   G  + 
Sbjct: 994  KGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDS 1053

Query: 498  ALSLLDDMYLCKKDPDTVTYTTIIDAL 524
            A +    M +    P++ TY  + + L
Sbjct: 1054 AYAAYGRMIVGGCLPNSSTYMQLPNQL 1080



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 154/340 (45%), Gaps = 14/340 (4%)

Query: 226  KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
            K  +A   +++ +  G++     YN LI G  D + I  A  L  EM   GC PD+ +Y 
Sbjct: 735  KALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYN 794

Query: 286  TVMGYLCKEKRIKEVRDLMEKMVND-------------SNLFHDQGRIEEAKELVNQMSQ 332
             ++  + K  RI+E+  + E+M                S L   + R+E+A +L   +  
Sbjct: 795  LLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSR-RLEQAIDLYYNLMS 853

Query: 333  MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
             G  P   TY  +++G  + G ++ A+ +  +M  +GCK N   Y   LNG    G + +
Sbjct: 854  QGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEK 913

Query: 393  AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
               +     ++   P+  +Y++++  L + G+L++     R++++ G  P  +  NLLI 
Sbjct: 914  VCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLID 973

Query: 453  SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
             L +  +++ A     E   KG   N+  + SLI    + G   EA  + +++      P
Sbjct: 974  GLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKP 1033

Query: 513  DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
            +  TY  +I   S +G  + A     +M+  G +P   TY
Sbjct: 1034 NVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 63/141 (44%)

Query: 144  YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
            Y ++++ L K           R +   G+E     ++ L+    ++ +L  A+ + + MQ
Sbjct: 933  YTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQ 992

Query: 204  KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
            K  + PNL   N+ I  L    K A+A +  E +   G  PNV TYN LI+GY       
Sbjct: 993  KKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTD 1052

Query: 264  DAIKLIDEMPLKGCSPDKVSY 284
             A      M + GC P+  +Y
Sbjct: 1053 SAYAAYGRMIVGGCLPNSSTY 1073



 Score = 40.0 bits (92), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 46/110 (41%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            D I Y ++++ L K+K  + A  +   M ++GI      ++ L++   +AGK   A  + 
Sbjct: 964  DLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMY 1023

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
              +      PN+   N  I    V      A     RM + G  PN  TY
Sbjct: 1024 EELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/564 (24%), Positives = 262/564 (46%), Gaps = 17/564 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  +++   K +    A  V+  M  +G+      ++ L+  +  +G    A+ V+
Sbjct: 186 DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVV 245

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+   V PN++     I     G  + +A    E M  +G+ P+V+T + L+ G C  
Sbjct: 246 ERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRD 305

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            +  +A  L  EM   G +P+ V+Y T++  L K +R  E   L+ +MV+          
Sbjct: 306 GQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMY 365

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               +    +G+IEEAK+++         P+ VTYT +V+  CR G +D A+++L QM  
Sbjct: 366 TALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEE 425

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
               PN V++++ +NGL   G   +A + +   ++    PN +TY  ++ G  +      
Sbjct: 426 KSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEA 485

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A DV R+M+ +G       ++ L+  L + G ++GA+   ++   +G  ++ VN+T+L+ 
Sbjct: 486 ALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMD 545

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G  + G++  A  +  ++      PD V Y   I+ L   G+  EA   + +M + GL P
Sbjct: 546 GLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEP 605

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
              TY T+I   C+ G+    LKLL++M   S +     Y  ++  L   G +++A K L
Sbjct: 606 DQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKA-KFL 664

Query: 606 GKVLRTASKADASTCHV-LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
              + +A  A  S  H  ++++      P +  ++   M    L  D+ +   +   L  
Sbjct: 665 LNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCC 724

Query: 665 EGKSEEADTLMLRFVERGHIQPKS 688
            G +  A  ++   + RG I P +
Sbjct: 725 HGMARNATVVLDEMLTRG-IAPDT 747



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 150/576 (26%), Positives = 260/576 (45%), Gaps = 22/576 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y + L  LS+    + A  VL  M +RG+       S  +V   R G +  A  + 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173

Query: 200 SMMQKAAVAPNLLIC--NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            M+ +      L +   N  I        +A AL  +ERM   G+  +V+ YN L+ G+ 
Sbjct: 174 EMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFF 233

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD- 316
                  A+++++ M   G  P+ V+Y  ++G  CK K + E   L E MV  S +  D 
Sbjct: 234 HSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVR-SGVLPDV 292

Query: 317 ------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                        G+  EA  L  +M ++G  P+ VTY  +++   +     ++  +L +
Sbjct: 293 VTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGE 352

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G   + V YTA ++ L   GK  EA++++  ++ +  TPN +TY+V++    R G 
Sbjct: 353 MVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGN 412

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           +  A  V+ +M +K   P  V  + +I  L + G +  A  +M++  + G A NVV + +
Sbjct: 413 IDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGT 472

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI GF +    E AL +  DM     + +     ++++ L KNG +E A  L   M  +G
Sbjct: 473 LIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERG 532

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAG 602
           L+   V Y T++    + G +    K+ ++++ K     A  YN  I  LC+ G   EA 
Sbjct: 533 LLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAK 592

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
             L ++  T  + D +T + ++ +   +G    A K+   M   ++ P+L     +   L
Sbjct: 593 SFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGL 652

Query: 663 ILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVF 698
           +  G  ++A  L+      G   P S  H   QRV 
Sbjct: 653 LEAGVVKKAKFLLNEMASAG-FAPTSLTH---QRVL 684



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 250/551 (45%), Gaps = 65/551 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D ++Y  +++ L K    + AK VLR      I      ++ L+ A+ RAG +  A  VL
Sbjct: 361 DLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVL 420

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY--- 256
             M++ +V PN++  ++ I+ LV    L KA  ++ +M+ +GI PNV+TY  LI G+   
Sbjct: 421 LQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKF 480

Query: 257 ------CDLHR--------------------------IKDAIKLIDEMPLKGCSPDKVSY 284
                  D++R                          I+ A  L  +M  +G   D V+Y
Sbjct: 481 QGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNY 540

Query: 285 YTVMGYLCKEKRI----KEVRDLMEKMVNDSNLFHDQ--------GRIEEAKELVNQMSQ 332
            T+M  L K   +    K  ++LMEK ++   + ++         G+  EAK  + +M  
Sbjct: 541 TTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRN 600

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G  PD  TY  ++   CR G+  +A K+L++M  +  KPN ++YT  + GL   G   +
Sbjct: 601 TGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKK 660

Query: 393 AREMINTSEEEWWTPNAITYSVVMH---GLRREGKLSEACDVVRE----MVKKGFFPTPV 445
           A+ ++N      + P ++T+  V+    G RR        DV+ E    M+  G      
Sbjct: 661 AKFLLNEMASAGFAPTSLTHQRVLQACSGSRRP-------DVILEIHELMMGAGLHADIT 713

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N L+  LC  G    A   + E L +G A + + F +LI G C+   L+ A ++   M
Sbjct: 714 VYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQM 773

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P+  T+ T++  L   GR+ EA  ++  M   GL P  +TY  ++  Y +    
Sbjct: 774 LHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNK 833

Query: 566 EDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
            + L+L  +M+SK     A  YN ++ +    G + +A ++  ++ R      +ST  +L
Sbjct: 834 VEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDIL 893

Query: 624 VESY--LNKGI 632
           +  +  L  GI
Sbjct: 894 LNGWSKLRNGI 904



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 151/668 (22%), Positives = 271/668 (40%), Gaps = 119/668 (17%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++     +     A  V+  M   G+E     ++ L+  Y +   +  A  + 
Sbjct: 221 DVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLY 280

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M ++ V P+++  +  +  L    + ++A      M   G+ PN +TY  LI      
Sbjct: 281 EGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKA 340

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R  +++ L+ EM  +G   D V Y  +M  L KE +I+E +D++    +D+        
Sbjct: 341 RRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTY 400

Query: 312 NLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
            +  D     G I+ A++++ QM +   IP+VVT+++++NG  + G L +A   +++M  
Sbjct: 401 TVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKD 460

Query: 368 HGCKPNTVSYT-----------------------------------AFLNGLCHNGKSLE 392
            G  PN V+Y                                    + +NGL  NG    
Sbjct: 461 SGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEG 520

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A  +    +E     + + Y+ +M GL + G +  A  V +E+++K   P  V  N+ I 
Sbjct: 521 AEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFIN 580

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC  GK   AK F++E  N G   +   + ++I   C++G   +AL LL +M      P
Sbjct: 581 CLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKP 640

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT--------------------- 551
           + +TYTT++  L + G V++A  L+ +M S G  PT +T                     
Sbjct: 641 NLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIH 700

Query: 552 --------------YRTVIHRYCQVGRVEDLLKLLEKMLSKQ--------------KCRT 583
                         Y T++H  C  G   +   +L++ML++                C++
Sbjct: 701 ELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKS 760

Query: 584 A--------YNQVIE-----NLCSF----GYLEEAGKI------LGKVLRTASKADASTC 620
           +        Y Q++      N+ +F    G LE AG+I      L  + +   + +  T 
Sbjct: 761 SHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTY 820

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
            +LV  Y  K   + A ++ C M ++  IP       +       G   +A  L      
Sbjct: 821 DILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKR 880

Query: 681 RGHIQPKS 688
           RG +   S
Sbjct: 881 RGVLHTSS 888



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 183/410 (44%), Gaps = 12/410 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L KT     A +V + +  + +      ++  +      GK   A   L
Sbjct: 536 DHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFL 595

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+   + P+    NT I       K +KAL+ L+ M+   I PN++TY  L+ G  + 
Sbjct: 596 KEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEA 655

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR---IKEVRDLM--EKMVNDSNLF 314
             +K A  L++EM   G +P  +++  V+      +R   I E+ +LM    +  D  ++
Sbjct: 656 GVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVY 715

Query: 315 HD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +         G    A  ++++M   G  PD +T+ A++ G C+   LD A  +  QM H
Sbjct: 716 NTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLH 775

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN  ++   L GL   G+  EA  +++  ++    PN +TY +++ G  ++    E
Sbjct: 776 QGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVE 835

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +  EMV KGF P     N L+    + G M+ AK+   E   +G       +  L+ 
Sbjct: 836 ALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLN 895

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           G+ +  +  E   LL DM      P   T +++  A S+ G   EA  L+
Sbjct: 896 GWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLL 945



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/430 (21%), Positives = 173/430 (40%), Gaps = 66/430 (15%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLI----DEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           +  + LT N +I  YC L  ++ A+ L+            + D VSY   +  L      
Sbjct: 72  VPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALS----- 126

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                             +QG    A  ++++M + G   D VT +  + G CR G + +
Sbjct: 127 ------------------EQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGE 168

Query: 358 AKKM-------------------------------------LQQMYHHGCKPNTVSYTAF 380
           A  +                                     +++M   G   + V Y + 
Sbjct: 169 AAALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSL 228

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           + G  H+G +  A E++   + +   PN +TY+ ++    +   + EA  +   MV+ G 
Sbjct: 229 VAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGV 288

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  V ++ L+  LCR+G+   A    +E    G A N V + +LI    +     E+L 
Sbjct: 289 LPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLG 348

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           LL +M       D V YT ++D L K G++EEA +++    S  + P  VTY  ++  +C
Sbjct: 349 LLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHC 408

Query: 561 QVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           + G ++   ++L +M  K        ++ +I  L   G L +A   + K+  +    +  
Sbjct: 409 RAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVV 468

Query: 619 TCHVLVESYL 628
           T   L++ + 
Sbjct: 469 TYGTLIDGFF 478



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 142/310 (45%), Gaps = 16/310 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN--AMYVL 199
           I Y  ++  L +  + + AK +L  MA  G    P + ++  V  + +G  R    + + 
Sbjct: 643 ITYTTLVVGLLEAGVVKKAKFLLNEMASAGFA--PTSLTHQRVLQACSGSRRPDVILEIH 700

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M  A +  ++ + NT +HVL        A   L+ M   GI P+ +T+N LI G+C  
Sbjct: 701 ELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKS 760

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFH 315
             + +A  +  +M  +G SP+  ++ T++G L    RI E   ++  M    +  +NL +
Sbjct: 761 SHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTY 820

Query: 316 D--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           D        +    EA  L  +M   G IP   TY ++++ F + G ++QAK++  +M  
Sbjct: 821 DILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKR 880

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G    + +Y   LNG       +E R ++   +E  + P+  T S +     R G   E
Sbjct: 881 RGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGE 940

Query: 428 ACDVVREMVK 437
           A  +++ + K
Sbjct: 941 ARRLLKTLFK 950


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 218/458 (47%), Gaps = 18/458 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +LR M R      P+AFSY  ++    R+GK  +A+ V   M    VAPN +  NT 
Sbjct: 177 ALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTM 236

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I   V G  L    R  ++M   G  PNV+TYN L+ G C   R+ +   L+DEM     
Sbjct: 237 IDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSM 296

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
            PD  +Y  +   L +    + +  L  + +               N     G++ +A++
Sbjct: 297 LPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQ 356

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++  +   G +P    Y  ++NG+C+V +L  A  + +QM     +P+ ++Y A +NGLC
Sbjct: 357 VLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLC 416

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
                 EA +++   E+    P+  T++ ++    R G+L +   V+ +M  KG     +
Sbjct: 417 KMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVI 476

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               ++++ C+ GK+  A   + + ++K    N   + S+I  + + G  E+A  L++ M
Sbjct: 477 SFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKM 536

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                     TY  ++  L KN +++EA EL+  + ++GL P VV+Y T+I   C  G  
Sbjct: 537 KSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDT 596

Query: 566 EDLLKLLEKMLS---KQKCRTAYNQVIENLCSFGYLEE 600
           +  L+LL++M     +   RT Y+ ++  L S G + +
Sbjct: 597 DRALELLQEMHKYDIRPTLRT-YHPLLSALGSAGRVHD 633



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/544 (23%), Positives = 237/544 (43%), Gaps = 63/544 (11%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM--QLAGITPNVL 247
           G+  +      ++  A   P+    N A+   V    L +AL  L RM        P+  
Sbjct: 137 GRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAF 196

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           +YN +I G     +  DA+K+ DEM  +G +P++++Y T++     +  +K         
Sbjct: 197 SYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMI-----DGHVK--------- 242

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     G +E    L +QM Q G  P+VVTY  +++G CR G +D+ + ++ +M  
Sbjct: 243 ---------GGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTS 293

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +   P+  +Y+   +GL   G S     +   S ++     A T S++++GL ++GK+++
Sbjct: 294 YSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAK 353

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  V+  +V  G  PT    N LI   C+   + GA    ++  ++    + + + +LI 
Sbjct: 354 AEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALIN 413

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS---------------------- 525
           G C+   + EA  L+ +M     DP   T+ T+IDA                        
Sbjct: 414 GLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKS 473

Query: 526 -------------KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
                        KNG++ EA  ++  M+ K +VP    Y ++I  Y + G  E    L+
Sbjct: 474 NVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLV 533

Query: 573 EKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           EKM S     +   YN +++ LC    ++EA +++  +     + D  + + ++ +  NK
Sbjct: 534 EKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNK 593

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEE 690
           G    A ++   M   ++ P L+    +   L   G+  + + L    V + +++P S  
Sbjct: 594 GDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHK-NVEPSSSI 652

Query: 691 HLQR 694
           +  R
Sbjct: 653 YGTR 656



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 220/488 (45%), Gaps = 47/488 (9%)

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           P+L  CN  +  L+   + A        +  AG  P+   +N  ++       + +A+ +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 269 IDEMPLK--GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKEL 326
           +  M        PD  SY  V+  L +                        G+  +A ++
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWR-----------------------SGKGSDALKV 217

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
            ++M   G  P+ +TY  +++G  + G+L+   ++  QM   G KPN V+Y   L+GLC 
Sbjct: 218 FDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCR 277

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G+  E R +++        P+  TYS++  GL R G       +  E +KKG       
Sbjct: 278 AGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYT 337

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            ++L+  LC++GK+  A++ ++  ++ G       + +LI G+CQ  DL+ A S+ + M 
Sbjct: 338 CSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMK 397

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                PD +TY  +I+ L K   + EA +L+M+M   G+ P+V T+ T+I  Y + G++E
Sbjct: 398 SRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLE 457

Query: 567 DLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
               +L  M  K  +    ++  V++  C  G + EA  IL  ++      +A   + ++
Sbjct: 458 KCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSII 517

Query: 625 ESYLNKGIPLLAY---------KVACRMFNRNLIPDLK-LCKKVSERLILEGKSEEADTL 674
           ++Y+  G    A+          V+  +F  NL+  LK LCK          + +EA+ L
Sbjct: 518 DAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLL--LKGLCKN--------SQIDEAEEL 567

Query: 675 MLRFVERG 682
           +     +G
Sbjct: 568 IYNLTNQG 575



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 179/381 (46%), Gaps = 25/381 (6%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+ F+Y  L    +R G  R  + +     K  V      C+  ++ L    K+AKA + 
Sbjct: 298 PDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQV 357

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           LE +   G+ P    YN LI GYC +  ++ A  + ++M  +   PD ++Y  ++  LCK
Sbjct: 358 LEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCK 417

Query: 294 EKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
                     ME              I EA++LV +M + G  P V T+  +++ + R G
Sbjct: 418 ----------MEM-------------ITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAG 454

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           +L++   +L  M   G K N +S+ + +   C NGK  EA  +++    +   PNA  Y+
Sbjct: 455 QLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYN 514

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++      G   +A  +V +M   G   +    NLL++ LC+  ++D A++ +    N+
Sbjct: 515 SIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQ 574

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   +VV++ ++I   C KGD + AL LL +M+     P   TY  ++ AL   GRV + 
Sbjct: 575 GLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDM 634

Query: 534 TELMMKMLSKGLVPTVVTYRT 554
             L   M+ K + P+   Y T
Sbjct: 635 ECLYQHMVHKNVEPSSSIYGT 655



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 145/319 (45%), Gaps = 32/319 (10%)

Query: 125 LQFFYWADRQWRYRH---DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           LQ  +    Q + RH   D I Y  ++  L K ++   A+ ++  M + G++   E F+ 
Sbjct: 386 LQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNT 445

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+ AY RAG+L     VLS MQ   +  N++   + +       K+ +A+  L+ M    
Sbjct: 446 LIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKD 505

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + PN   YN +I  Y +    + A  L+++M   G S    +Y  ++  LCK        
Sbjct: 506 VVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNS------ 559

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                            +I+EA+EL+  ++  G  PDVV+Y  +++  C  G+ D+A ++
Sbjct: 560 -----------------QIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALEL 602

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           LQ+M+ +  +P   +Y   L+ L   G+  +   +      +   P++  Y     G R 
Sbjct: 603 LQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY-----GTRC 657

Query: 422 EGKLSEACDVVREMVKKGF 440
           E + S+   + +EM +KG 
Sbjct: 658 ENE-SKVASLKKEMSEKGI 675


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 237/514 (46%), Gaps = 38/514 (7%)

Query: 88  RSAWSPKLEGELRNLLRSLKPRQICA-VLRSQADERVALQFFYWADRQWRYRHDPIVYYM 146
           +  WS     +L+ +++   P  +   +  S+A   + L +F W  +++   H+   +  
Sbjct: 58  KQHWS-----KLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCR 112

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV-----------------AYSRA 189
           +L +L+  K     + +L   A+         F  L V                 AY + 
Sbjct: 113 LLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKN 172

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G++  A+             + L CN  +  LV   ++       + M    I  NV+T+
Sbjct: 173 GEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTF 232

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           + +I G C + + + A  ++++M   G SP  ++Y T++   CK  ++ +   L+++MV 
Sbjct: 233 DVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVA 292

Query: 310 DS--------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                     N+  D       +  AK++  +M + G  P+VVTY +++NG C  G+LD+
Sbjct: 293 KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDE 352

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  +  +M   G KPN V+Y A +NG C      EAREM++   +    PN IT++ ++ 
Sbjct: 353 ALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLID 412

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
              + G++ +A  +   M+  G  P     N LI   CREG +  A+K  +E    G   
Sbjct: 413 AYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKA 472

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD---PDTVTYTTIIDALSKNGRVEEAT 534
           ++V +  L+   C+KG+  +A+ LLD+M L +K     + VTY  +I      G++EEA 
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 532

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
            L+ +ML KGL+P   TY  +     + G + D+
Sbjct: 533 RLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDI 566



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 181/340 (53%), Gaps = 5/340 (1%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +GRI   + +  +M +     +VVT+  V+NG C+VG+  +A  +++ M   G  P+ ++
Sbjct: 207 EGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVIT 266

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   ++G C  GK  +A  ++     +   PN IT+++++ G  R+  ++ A  V  EM 
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           ++G  P  V  N LI  LC  GK+D A     +    G   NVV + +LI GFC+K  L+
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           EA  +LDD+      P+ +T+ T+IDA  K GR+++A  L   ML  G+ P V TY  +I
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446

Query: 557 HRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVL---RT 611
             +C+ G V++  KL ++M     +     YN +++ LC  G   +A ++L ++    + 
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKK 506

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
             +A+  T +VL++ + NKG    A ++   M  + LIP+
Sbjct: 507 GRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPN 546



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 190/383 (49%), Gaps = 30/383 (7%)

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           ++S + C P +V+         + G +   + + ++M       N V++   +NGLC  G
Sbjct: 191 RLSALSCNPMLVS-------LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVG 243

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K  +A +++   +   ++P+ ITY+ ++ G  + GK+ +A  +++EMV K   P  +  N
Sbjct: 244 KFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFN 303

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           +LI   CR+  +  AKK  +E   +G   NVV + SLI G C  G L+EAL L D M   
Sbjct: 304 ILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM 363

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P+ VTY  +I+   K   ++EA E++  +  +GL P V+T+ T+I  Y + GR++D 
Sbjct: 364 GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423

Query: 569 LKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
             L   ML    C   + YN +I   C  G ++EA K+  ++     KAD  T ++LV++
Sbjct: 424 FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL------------EGKSEEADTL 674
              KG      + A R     L+ ++ L +K   R  +            +GK EEA+ L
Sbjct: 484 LCKKG----ETRKAVR-----LLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRL 534

Query: 675 MLRFVERGHIQPKSEEHLQRQRV 697
           +   +E+G I  ++   + R  +
Sbjct: 535 LNEMLEKGLIPNRTTYDILRDEM 557



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 152/308 (49%), Gaps = 3/308 (0%)

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           GC  N++     +     NG+   A E  + + +  +  +A++ + ++  L +EG++   
Sbjct: 155 GC-ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVV 213

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             V +EM+++      V  +++I  LC+ GK   A   +++    G + +V+ + ++I G
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +C+ G + +A +LL +M   +  P+ +T+  +ID   ++  V  A ++  +M  +GL P 
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPN 333

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILG 606
           VVTY ++I+  C  G++++ L L +KM  +  +     YN +I   C    L+EA ++L 
Sbjct: 334 VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
            + +     +  T + L+++Y   G    A+ +   M +  + P++     +      EG
Sbjct: 394 DIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREG 453

Query: 667 KSEEADTL 674
             +EA  L
Sbjct: 454 NVKEARKL 461



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 2/252 (0%)

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
            W   N+I   +++    + G++  A +        GF  + +  N ++ SL +EG++  
Sbjct: 153 SWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGV 212

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
            +   +E + +   VNVV F  +I G C+ G  ++A  +++DM      P  +TY TIID
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QK 580
              K G++ +A  L+ +M++K + P  +T+  +I  +C+   V    K+ E+M  +  Q 
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               YN +I  LCS G L+EA  +  K+     K +  T + L+  +  K +   A ++ 
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 641 CRMFNRNLIPDL 652
             +  R L P++
Sbjct: 393 DDIGKRGLAPNV 404


>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
 gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
          Length = 760

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 167/678 (24%), Positives = 307/678 (45%), Gaps = 87/678 (12%)

Query: 61  EEIRRVVLEEDEFRHPLVRE--VCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQ 118
           ++ +R+   + + R P   E  +CR++  R  W+ +L+  +R L+       +  VL   
Sbjct: 67  KQYQRIPRAKQQHRSPEKLEDIICRMMANRD-WTTRLQNSIRALVPEFDHSLVYNVLHGA 125

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAK-RVLRLMARRGIECRPE 177
                ALQFF W +R    +HD   +  +++IL +  +   A+  VL  M ++G E   +
Sbjct: 126 RKPDHALQFFRWVERAGLIQHDRETHMKIIQILGRYSMLNHARCIVLEDMPKKGFELDED 185

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            F  L+ +Y +AG ++ ++ + S M++  V  ++   N    V+V   +   A RF  +M
Sbjct: 186 MFVLLIDSYGKAGIVQESVKMFSKMKELGVERSVKSYNALFKVIVRKGRYMMAKRFFNKM 245

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              GI P   TYN LI G+    R++ A++  ++M ++G SPD V+Y T++         
Sbjct: 246 LDEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVTYNTMI--------- 296

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                         N ++   R+EEA++L  +M      P V++YT ++ G+  V  ++ 
Sbjct: 297 --------------NGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRIND 342

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP--NAITYSVV 415
             ++L++M   G KPN V+YT  L  LC  GK  EA++++         P  N+I +  +
Sbjct: 343 GLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKMTEAKDILKEMVRRRIAPKDNSI-FLKL 401

Query: 416 MHGLRREGKLSEACDVVREMVK------KGFFPTPVE----------------------- 446
           ++   + G L  A DV+  M+K       G +   +E                       
Sbjct: 402 LNSQCKAGDLKAAVDVLDGMIKLSIPSEAGHYGVLIENFCKAEEYDQAVKFVDKLIENDI 461

Query: 447 --------------INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
                          N +IQ LC  G+   A+   ++ L KG   + + F +LI G  ++
Sbjct: 462 ILRPQSTLEMESGAYNPVIQYLCSHGQTGKAEILFRQLLKKGVE-DPLAFNNLICGHAKE 520

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G  + A  +L  M       D   Y  +I++  + G   +A   +  M+  G +P    +
Sbjct: 521 GTPDSAFEILKIMGRKGIPRDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVF 580

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           R+V+    + GRV+   ++++ M+ K  ++      +++E L   G+ EEA   LG++  
Sbjct: 581 RSVMESLYEDGRVQTASRVMKSMVEKGVKENMDLVAKILEALLMRGHEEEA---LGRIDL 637

Query: 611 TASKADASTCHVLVESYLN----KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
             S    S C+V  +S L+    KG  + A K+      R+   D K   KV + L+  G
Sbjct: 638 LMS----SQCNVNFDSLLSILSEKGKTIAALKLLDFGLQRDCDIDFKSYDKVLDALLAAG 693

Query: 667 KSEEADTLMLRFVERGHI 684
           K+  A +++ + +E+G +
Sbjct: 694 KTLNAYSILCKIMEKGGV 711



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 128/555 (23%), Positives = 260/555 (46%), Gaps = 44/555 (7%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y  + +++ +      AKR    M   GI      ++ L+  +  + +LR A+     M+
Sbjct: 222 YNALFKVIVRKGRYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDMK 281

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
              ++P+++  NT I+      ++ +A +    M+   I P V++Y  +IKGY  + RI 
Sbjct: 282 VRGISPDVVTYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRIN 341

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV------NDSNLFH-- 315
           D ++L++EM   G  P+ V+Y T++  LC   ++ E +D++++MV       D+++F   
Sbjct: 342 DGLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKMTEAKDILKEMVRRRIAPKDNSIFLKL 401

Query: 316 -----DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                  G ++ A ++++ M ++    +   Y  ++  FC+  E DQA K          
Sbjct: 402 LNSQCKAGDLKAAVDVLDGMIKLSIPSEAGHYGVLIENFCKAEEYDQAVK---------- 451

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
                    F++ L  N   L  +   +T E E     +  Y+ V+  L   G+  +A  
Sbjct: 452 ---------FVDKLIENDIILRPQ---STLEME-----SGAYNPVIQYLCSHGQTGKAEI 494

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           + R+++KKG    P+  N LI    +EG  D A + ++    KG   +   +  LI  + 
Sbjct: 495 LFRQLLKKG-VEDPLAFNNLICGHAKEGTPDSAFEILKIMGRKGIPRDADAYRLLIESYL 553

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +KG+  +A + LD M      PD+  + +++++L ++GRV+ A+ +M  M+ KG+   + 
Sbjct: 554 RKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKGVKENMD 613

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
               ++      G  E+ L  ++ ++S Q C   ++ ++  L   G    A K+L   L+
Sbjct: 614 LVAKILEALLMRGHEEEALGRIDLLMSSQ-CNVNFDSLLSILSEKGKTIAALKLLDFGLQ 672

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                D  +   ++++ L  G  L AY + C++  +  +   +  + + + L  EG +++
Sbjct: 673 RDCDIDFKSYDKVLDALLAAGKTLNAYSILCKIMEKGGVTSWRSYEDLIKSLNQEGNTKQ 732

Query: 671 ADTL--MLRFVERGH 683
           AD L  M++  ++ H
Sbjct: 733 ADILSRMIKGDDKSH 747



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/409 (21%), Positives = 173/409 (42%), Gaps = 47/409 (11%)

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++  M + G   D   +  +++ + + G + ++ KM  +M   G + +  SY A    + 
Sbjct: 171 VLEDMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKELGVERSVKSYNALFKVIV 230

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G+ + A+   N   +E   P   TY+V++ G     +L  A     +M  +G  P  V
Sbjct: 231 RKGRYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVV 290

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N +I    R  +M+ A+K   E   K  A  V+++T++I+G+     + + L LL++M
Sbjct: 291 TYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRINDGLRLLEEM 350

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT----------------- 548
                 P+ VTYTT++  L   G++ EA +++ +M+ + + P                  
Sbjct: 351 KSVGIKPNNVTYTTLLPDLCDAGKMTEAKDILKEMVRRRIAPKDNSIFLKLLNSQCKAGD 410

Query: 549 -------------------VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK----------Q 579
                                 Y  +I  +C+    +  +K ++K++            +
Sbjct: 411 LKAAVDVLDGMIKLSIPSEAGHYGVLIENFCKAEEYDQAVKFVDKLIENDIILRPQSTLE 470

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
               AYN VI+ LCS G   +A +IL + L      D    + L+  +  +G P  A+++
Sbjct: 471 MESGAYNPVIQYLCSHGQTGKA-EILFRQLLKKGVEDPLAFNNLICGHAKEGTPDSAFEI 529

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
              M  + +  D    + + E  + +G+  +A T +   +E GH+   S
Sbjct: 530 LKIMGRKGIPRDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSS 578


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 211/464 (45%), Gaps = 14/464 (3%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+ A ++PN    N  I+      ++      L +    G+ P ++T+  LI G   + +
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSN 312
              A++L D+M  +GC PD  +Y T++  LCK         L +KM         V  S 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 313 LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L H      R+ EA ++ + M      P + TYT+++ G C      +A  +L +M    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PN V++   ++  C  GK L A  ++ T  E    P+ +TY+ +M+G     ++ EA 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            +   M+ KG  P     ++LI   C+  ++D AK+   E +++G   N V++ +LI G 
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           CQ G L EA  L  +M+     P+  TY  ++D   K G + +A  L   M S  L P +
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGK 607
           V Y  +++  C+ G ++D  +L  ++  +  Q     Y  +I  LC  G L+EA +    
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 420

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           +       D  + +V++  +L       A  +   M +R  I D
Sbjct: 421 MEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 223/485 (45%), Gaps = 45/485 (9%)

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M+LAG++PN  T N LI  +C L R+     ++ +    G  P  V++ T++  L K   
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGK--- 57

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                                G+  +A EL + M   GC PD  TYT ++NG C++GE  
Sbjct: 58  --------------------VGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETA 97

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
            A  + ++M   GC+ N V+Y+  ++ LC   +  EA ++ +  + +  +P   TY+ ++
Sbjct: 98  LAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLI 157

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            GL    +  EA  ++ EM      P  V  N+L+ + C+EGK+  A+  ++     G  
Sbjct: 158 QGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVE 217

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            +VV + SL+ G+    ++ EA  L D M      PD  +Y+ +I+   K  R++EA +L
Sbjct: 218 PDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQL 277

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVI--ENLCS 594
             +M+ +G  P  V+Y T+IH  CQ+GR+ +   L + M +       Y   I  +  C 
Sbjct: 278 FNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCK 337

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            GYL +A ++   +  T  K +    ++LV +    G    A ++   +F   L P++++
Sbjct: 338 QGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQI 397

Query: 655 CKKVSERLILEGKSEEA--------------DTLMLRFVERGHIQPKSEE---HL---QR 694
              +   L  EG  +EA              D      + RG +Q K E    HL    R
Sbjct: 398 YTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMR 457

Query: 695 QRVFL 699
            R F+
Sbjct: 458 DRGFI 462



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 207/420 (49%), Gaps = 25/420 (5%)

Query: 150 ILSKTKLCQGAKRVLRL---------MARRGIECRPEAFSYLMV--AYSRAGKLRNAMYV 198
           I++ T L  G  +V +          M  RG  C+P+ ++Y  +     + G+   A  +
Sbjct: 45  IVTFTTLINGLGKVGKFAQAVELFDDMVARG--CQPDDYTYTTIINGLCKIGETALAAGL 102

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
              M++A    N++  +T IH L    ++ +AL     M+   I+P + TY  LI+G C+
Sbjct: 103 FKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCN 162

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VN 309
             R K+A  L++EM      P+ V++  ++   CKE ++     +++ M         V 
Sbjct: 163 FSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVT 222

Query: 310 DSNLFHDQG---RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            ++L +       + EA++L + M   GC PDV +Y+ ++NG+C+   +D+AK++  +M 
Sbjct: 223 YNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMI 282

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
           H G  PN VSY   ++GLC  G+  EA+++          PN  TY++++ G  ++G L 
Sbjct: 283 HQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLG 342

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A  + R M      P  V  N+L+ ++C+ G +  A++   E    G   NV  +T++I
Sbjct: 343 KAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTII 402

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G C++G L+EAL    +M      PD  +Y  II    ++     A  L+ +M  +G +
Sbjct: 403 NGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFI 462



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 201/411 (48%), Gaps = 12/411 (2%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           VL    + G++     F+ L+    + GK   A+ +   M      P+     T I+ L 
Sbjct: 32  VLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLC 91

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              + A A    ++M+ AG   NV+TY+ LI   C   R+ +A+ +   M  K  SP   
Sbjct: 92  KIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIF 151

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQM 330
           +Y +++  LC   R KE   L+ +M + +            + F  +G++  A+ ++  M
Sbjct: 152 TYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTM 211

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
           ++MG  PDVVTY +++ G+    E+ +A+K+   M   GCKP+  SY+  +NG C   + 
Sbjct: 212 TEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRI 271

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA+++ N    +  TPN ++Y+ ++HGL + G+L EA D+ + M   G  P      +L
Sbjct: 272 DEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAIL 331

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           +   C++G +  A +  +   +     N+V +  L+   C+ G+L++A  L  ++++   
Sbjct: 332 LDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGL 391

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            P+   YTTII+ L K G ++EA E    M   G  P   +Y  +I  + Q
Sbjct: 392 QPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQ 442



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 171/366 (46%), Gaps = 27/366 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y  ++  L K +    A  +   M  + I   P  F+Y  L+       + + A  +L
Sbjct: 116 VTYSTLIHSLCKYRRVNEALDIFSYMKAKDIS--PTIFTYTSLIQGLCNFSRWKEASALL 173

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M    + PN++  N  +       K+  A   L+ M   G+ P+V+TYN L+ GY   
Sbjct: 174 NEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMW 233

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             + +A KL D M  KGC PD  SY  ++   CK K                       R
Sbjct: 234 TEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAK-----------------------R 270

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           I+EAK+L N+M   G  P+ V+Y  +++G C++G L +A+ + + M+ +G  PN  +Y  
Sbjct: 271 IDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAI 330

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L+G C  G   +A  +    +  +  PN + Y+++++ + + G L +A ++  E+   G
Sbjct: 331 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIG 390

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P       +I  LC+EG +D A +  +   + GC  +  ++  +IRGF Q  D   A+
Sbjct: 391 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAV 450

Query: 500 SLLDDM 505
            L+ +M
Sbjct: 451 HLIGEM 456



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 56/318 (17%)

Query: 150 ILSKTKLCQG---------AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           I + T L QG         A  +L  M    I      F+ L+  + + GK+  A  VL 
Sbjct: 150 IFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLK 209

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M +  V P+++  N+ ++   +  ++ +A +  + M   G  P+V +Y+ LI GYC   
Sbjct: 210 TMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAK 269

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------- 313
           RI +A +L +EM  +G +P+ VSY T++  LC+  R++E +DL + M  + NL       
Sbjct: 270 RIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYA 329

Query: 314 -----FHDQG-----------------------------------RIEEAKELVNQMSQM 333
                F  QG                                    +++A+EL +++  +
Sbjct: 330 ILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVI 389

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  P+V  YT ++NG C+ G LD+A +  + M   GC P+  SY   + G   +     A
Sbjct: 390 GLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRA 449

Query: 394 REMINTSEEEWWTPNAIT 411
             +I    +  +  +A T
Sbjct: 450 VHLIGEMRDRGFITDAGT 467


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/528 (24%), Positives = 245/528 (46%), Gaps = 22/528 (4%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
            AD R A      A      R D   +  +++          A  ++R M R      P+
Sbjct: 138 HADVRAAFGLLVAAGA----RPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPD 193

Query: 178 AFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
           AFSY  ++    R+GK  +A+ V   M    V PN +  NT I   V G  L    R  +
Sbjct: 194 AFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRD 253

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
           +M   G  PN++TYN L+ G C   R+ +   L+DEM      PD  +Y  +   L +  
Sbjct: 254 QMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTG 313

Query: 296 RIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
             + +  L  + +               N     G++ +A++++  +   G +P  V Y 
Sbjct: 314 ESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYN 373

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            ++NG+C+V +L  A  + +QM     +P+ ++Y A +NGLC      +A +++   E+ 
Sbjct: 374 TLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKS 433

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+  T++ ++      G+L +   V+ +M +KG     +    ++++ C+ GK+  A
Sbjct: 434 GVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEA 493

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
              + + + K  A N   + S+I  + + GD E+A  L++ M         VTY  ++  
Sbjct: 494 VAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKG 553

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
           L ++ +++EA EL+  + ++GL P VV+Y T+I   C  G  +  L+LL++M +K   R 
Sbjct: 554 LCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM-NKYGIRP 612

Query: 584 ---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
               Y+ ++  L S G + +   +  ++L    +  +S   ++V++Y+
Sbjct: 613 TLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 660



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 223/483 (46%), Gaps = 37/483 (7%)

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           P+L  CN  +  L+   + A        +  AG  P+   +N +++       +  A+ +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 269 IDEMPLK--GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKEL 326
           +  M        PD  SY  V+  L +                        G+  +A ++
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWR-----------------------SGKGSDALKV 216

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
            ++M  MG +P+ +TY  +++G  + G+L+   ++  QM H G KPN V+Y   L+GLC 
Sbjct: 217 FDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCR 276

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G+  E R +++        P+  TYS++  GL R G+      +  E +KKG       
Sbjct: 277 AGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYT 336

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            ++L+  LC++GK+  A++ ++  ++ G     V + +LI G+CQ  DL  A  + + M 
Sbjct: 337 CSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMK 396

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                PD +TY  +I+ L K   V +A +L+M+M   G+ P+V T+ T+I  Y   G++E
Sbjct: 397 SRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLE 456

Query: 567 DLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
               +L  M  K  +    ++  V++  C  G + EA  IL  ++      +A   + ++
Sbjct: 457 KCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSII 516

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG-----KSEEADTLMLRFV 679
           ++Y+  G    A+ +  +M N  +   +     V+  L+L+G     + +EA+ L+    
Sbjct: 517 DAYIESGDTEQAFLLVEKMKNSGVSASI-----VTYNLLLKGLCRSSQIDEAEELIYTLR 571

Query: 680 ERG 682
            +G
Sbjct: 572 NQG 574



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/521 (23%), Positives = 233/521 (44%), Gaps = 30/521 (5%)

Query: 175 RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKA--AVAPNLLICNTAIHVLVVGNKLAKA 230
           RP+ F++  ++ A   AG L  A+ ++  M ++  A  P+    N  I  L    K + A
Sbjct: 154 RPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDA 213

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           L+  + M   G+ PN +TYN +I G+     ++   +L D+M   G  P+ V+Y  ++  
Sbjct: 214 LKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSG 273

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LC+                        GR++E + L+++M+     PD  TY+ + +G  
Sbjct: 274 LCR-----------------------AGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 310

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           R GE      +  +    G      + +  LNGLC +GK  +A +++         P  +
Sbjct: 311 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 370

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            Y+ +++G  +   L  A  +  +M  +   P  +  N LI  LC+   +  A+  + E 
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 430

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
              G   +V  F +LI  +   G LE+  ++L DM       D +++ +++ A  KNG++
Sbjct: 431 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQV 588
            EA  ++  M+ K + P    Y ++I  Y + G  E    L+EKM +     +   YN +
Sbjct: 491 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 550

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           ++ LC    ++EA +++  +     + D  + + ++ +  NKG    A ++   M    +
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
            P L+    +   L   G+  + + L  + + + +++P S 
Sbjct: 611 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHK-NVEPSSS 650



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 163/348 (46%), Gaps = 18/348 (5%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           ++L  L K      A++VL ++   G+      ++ L+  Y +   LR A  +   M+  
Sbjct: 339 ILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            + P+ +  N  I+ L     + KA   +  M+ +G+ P+V T+N LI  Y    +++  
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NL 313
             ++ +M  KG   D +S+ +V+   CK  +I E   +++ M+               + 
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           + + G  E+A  LV +M   G    +VTY  ++ G CR  ++D+A++++  + + G +P+
Sbjct: 519 YIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 578

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            VSY   ++  C+ G + +A E++    +    P   TY  ++  L   G++ +   + +
Sbjct: 579 VVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQ 638

Query: 434 EMVKKGFFPTPVEINLLIQSLCR---EGKMDGAKKFMQECLNKGCAVN 478
           +M+ K   P+     +++ +  R   + K+   KK M E   KG A +
Sbjct: 639 QMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSE---KGIAFD 683



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 142/310 (45%), Gaps = 26/310 (8%)

Query: 134 QWRYRH---DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
           Q + RH   D I Y  ++  L K ++   A+ ++  M + G++   E F+ L+ AY  AG
Sbjct: 394 QMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 453

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L     VLS MQ+  +  +++   + +       K+ +A+  L+ M    + PN   YN
Sbjct: 454 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 513

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            +I  Y +    + A  L+++M   G S   V+Y  ++  LC+                 
Sbjct: 514 SIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSS--------------- 558

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                   +I+EA+EL+  +   G  PDVV+Y  +++  C  G+ D+A ++LQ+M  +G 
Sbjct: 559 --------QIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P   +Y   ++ L   G+  +   +      +   P++  Y +++    R    S+   
Sbjct: 611 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 670

Query: 431 VVREMVKKGF 440
           + +EM +KG 
Sbjct: 671 LKKEMSEKGI 680



 Score = 43.5 bits (101), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 36/177 (20%), Positives = 72/177 (40%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
           VY  +++   ++   + A  ++  M   G+      ++ L+    R+ ++  A  ++  +
Sbjct: 511 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 570

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
           +   + P+++  NT I          KAL  L+ M   GI P + TY+ L+       R+
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRV 630

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            D   L  +M  K   P    Y  ++    + +   +V  L ++M      F D  R
Sbjct: 631 HDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDTKR 687


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 231/537 (43%), Gaps = 38/537 (7%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G+     AF+ L+ A+S AG+  +A+   S M +    P   + NT +  LV    +  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           L    RM  AG  PN  TYN L+ G C      DA+K+ DEM  +G  P+   Y  ++  
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LC                       + G+I+EA +L+  M   GC+PD VTY A ++G C
Sbjct: 252 LC-----------------------NAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLC 288

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +VG +++A + L  +   G       Y+  ++GL    +  E      T  E   +P+ +
Sbjct: 289 KVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVV 348

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            Y++++ G    G++ +A   +  M KKGF P     N +++ LC  G ++ A     E 
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           L     ++    T +I G C++G ++EA+ + D+M     DP  +TY  +ID   + GR+
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468

Query: 531 EEATELMMKM-------------LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           EEA  L  KM             L    V    + R ++H  CQ G+V    KLL  ++ 
Sbjct: 469 EEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIID 528

Query: 578 KQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
                    YN +I  LC    L+ A ++  ++       D  T   L++  L       
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREND 588

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
           A  +   +      P L +   +   L    K  +A  L L ++ + +  P   E L
Sbjct: 589 AMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVL 645



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 214/483 (44%), Gaps = 64/483 (13%)

Query: 172 IECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
            + RP AF Y  ++ A   +G +  A+ + + M  A  APN    N  +  L        
Sbjct: 166 FQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGD 225

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           AL+  + M   GI PNV  Y  L+   C+  +I +A++L+  M  KGC PD+V+Y   + 
Sbjct: 226 ALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLS 285

Query: 290 YLCKEKRIKEV---------------------------------------RDLMEKMVND 310
            LCK  R+ E                                        + ++E+ ++ 
Sbjct: 286 GLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP 345

Query: 311 SNLFH--------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
             + +        + GRIE+A   ++ M + G +PD   Y  V+   C  G+L++A  + 
Sbjct: 346 DVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLR 405

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            +M  +    ++ + T  + GLC  G   EA ++ +   E    P  +TY+ ++ G  RE
Sbjct: 406 SEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYRE 465

Query: 423 GKLSEACDVVREMVKKGFFPTPV--------------EINLLIQSLCREGKMDGAKKFMQ 468
           G+L EA  +  +M + G  P+                 +  L+  +C+ G++  A K ++
Sbjct: 466 GRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLR 524

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
             ++ G   +VV + +LI G C+  +L+ A+ L  ++ L    PD +TY T+ID L +  
Sbjct: 525 SIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAH 584

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV 588
           R  +A  L   +L  G  P++  Y +++   C++ ++   + L    L K+      ++V
Sbjct: 585 RENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEV 644

Query: 589 IEN 591
           + N
Sbjct: 645 LAN 647



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 94/447 (21%), Positives = 169/447 (37%), Gaps = 98/447 (21%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           + M  R I      ++ ++   + AG++ +A+  L +M+K    P+    NT + VL   
Sbjct: 336 KTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDH 395

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             L +A      M    +  +  T   +I G C    + +A+++ DEM   GC P  ++Y
Sbjct: 396 GDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTY 455

Query: 285 YTVMGYLCKEKRIKEVRDLMEKM--VNDSNLF--------------------HD---QGR 319
             ++    +E R++E R L  KM   N+ +LF                    HD    G+
Sbjct: 456 NALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQ 515

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML----------------- 362
           + +A +L+  +   G +PDVVTY  ++NG C+   LD A ++                  
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575

Query: 363 ------------------QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA----------- 393
                             Q +   G  P+   Y + +  LC   K  +A           
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK 635

Query: 394 --------------------------REMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
                                     RE+I   ++E+   ++  Y++ + GL +  +  +
Sbjct: 636 YNFPVESEVLANAHKEIEDGSLDDGVRELIKI-DQEYGYISSNPYTIWLIGLCQVRRTDD 694

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +   + + G   TP    LLI  LC +  ++ A   M   L+K   ++      L+R
Sbjct: 695 ALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLR 754

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDT 514
             C     ++A +L   M+L   D D 
Sbjct: 755 WLCICYRRQDAQALAWRMHLVGYDMDV 781


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 231/537 (43%), Gaps = 38/537 (7%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G+     AF+ L+ A+S AG+  +A+   S M +    P   + NT +  LV    +  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           L    RM  AG  PN  TYN L+ G C      DA+K+ DEM  +G  P+   Y  ++  
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LC                       + G+I+EA +L+  M   GC+PD VTY A ++G C
Sbjct: 252 LC-----------------------NAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLC 288

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +VG +++A + L  +   G       Y+  ++GL    +  E      T  E   +P+ +
Sbjct: 289 KVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVV 348

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            Y++++ G    G++ +A   +  M KKGF P     N +++ LC  G ++ A     E 
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           L     ++    T +I G C++G ++EA+ + D+M     DP  +TY  +ID   + GR+
Sbjct: 409 LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRL 468

Query: 531 EEATELMMKM-------------LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           EEA  L  KM             L    V    + R ++H  CQ G+V    KLL  ++ 
Sbjct: 469 EEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIID 528

Query: 578 KQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
                    YN +I  LC    L+ A ++  ++       D  T   L++  L       
Sbjct: 529 SGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREND 588

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
           A  +   +      P L +   +   L    K  +A  L L ++ + +  P   E L
Sbjct: 589 AMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVL 645



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 214/483 (44%), Gaps = 64/483 (13%)

Query: 172 IECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
            + RP AF Y  ++ A   +G +  A+ + + M  A  APN    N  +  L        
Sbjct: 166 FQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGD 225

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           AL+  + M   GI PNV  Y  L+   C+  +I +A++L+  M  KGC PD+V+Y   + 
Sbjct: 226 ALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLS 285

Query: 290 YLCKEKRIKEV---------------------------------------RDLMEKMVND 310
            LCK  R+ E                                        + ++E+ ++ 
Sbjct: 286 GLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISP 345

Query: 311 SNLFH--------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
             + +        + GRIE+A   ++ M + G +PD   Y  V+   C  G+L++A  + 
Sbjct: 346 DVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLR 405

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            +M  +    ++ + T  + GLC  G   EA ++ +   E    P  +TY+ ++ G  RE
Sbjct: 406 SEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYRE 465

Query: 423 GKLSEACDVVREMVKKGFFPTPV--------------EINLLIQSLCREGKMDGAKKFMQ 468
           G+L EA  +  +M + G  P+                 +  L+  +C+ G++  A K ++
Sbjct: 466 GRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLR 524

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
             ++ G   +VV + +LI G C+  +L+ A+ L  ++ L    PD +TY T+ID L +  
Sbjct: 525 SIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAH 584

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV 588
           R  +A  L   +L  G  P++  Y +++   C++ ++   + L    L K+      ++V
Sbjct: 585 RENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEV 644

Query: 589 IEN 591
           + N
Sbjct: 645 LAN 647



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 94/447 (21%), Positives = 169/447 (37%), Gaps = 98/447 (21%)

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           + M  R I      ++ ++   + AG++ +A+  L +M+K    P+    NT + VL   
Sbjct: 336 KTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDH 395

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             L +A      M    +  +  T   +I G C    + +A+++ DEM   GC P  ++Y
Sbjct: 396 GDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTY 455

Query: 285 YTVMGYLCKEKRIKEVRDLMEKM--VNDSNLF--------------------HD---QGR 319
             ++    +E R++E R L  KM   N+ +LF                    HD    G+
Sbjct: 456 NALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQ 515

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML----------------- 362
           + +A +L+  +   G +PDVVTY  ++NG C+   LD A ++                  
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575

Query: 363 ------------------QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA----------- 393
                             Q +   G  P+   Y + +  LC   K  +A           
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK 635

Query: 394 --------------------------REMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
                                     RE+I   ++E+   ++  Y++ + GL +  +  +
Sbjct: 636 YNFPVESEVLANAHKEIEDGSLDDGVRELIKI-DQEYGYISSNPYTIWLIGLCQVRRTDD 694

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +   + + G   TP    LLI  LC +  ++ A   M   L+K   ++      L+R
Sbjct: 695 ALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLR 754

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDT 514
             C     ++A +L   M+L   D D 
Sbjct: 755 WLCICYRRQDAQALAWRMHLVGYDMDV 781


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 248/543 (45%), Gaps = 58/543 (10%)

Query: 109 RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA 168
           R +CA  R   D  V L   + + R+ +   D I Y  ++  L+K      A  +L  M 
Sbjct: 166 RSLCA--RGDLDRAVTL---FDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMP 220

Query: 169 RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVA-PNLLICNTAIHVLVVGNKL 227
           R  ++     ++ L+    +AG+    M V   + K   A PNL   N  +  L    + 
Sbjct: 221 RSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRF 280

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
            +     ERM    + P+V+TY  LI G C    +  A ++  E+   G   D   Y ++
Sbjct: 281 KEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSL 340

Query: 288 MGYLCKEKRIKE------------VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQ-MG 334
           +   C+  R++E            +R+L    +    LF D G ++EA EL + + + + 
Sbjct: 341 VKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLF-DSGMVDEAIELWDLLEKDVA 399

Query: 335 CIPDVVT-----------------------------------YTAVVNGFCRVGELDQAK 359
           CIPD VT                                   Y++++NG C VG L  A 
Sbjct: 400 CIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAV 459

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           K+ ++M   GCKPN+  Y A ++G C   ++ +A  + +   +   +P  ITY+ ++ GL
Sbjct: 460 KVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGL 519

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            +  K  EA  V REMV+ GF P       LI+ L  + K+D A    ++ L KG  V+V
Sbjct: 520 CKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDV 579

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKK-DPDTVTYTTIIDALSKNGRVEEATELMM 538
           +    LI G C  G ++EAL +  DM   K   P+ VTY T++D L + G +++A  L  
Sbjct: 580 MMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWT 639

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFG 596
            +   GL P +++Y T I   C   R+ + ++LL+++LS+    T   +N ++  +  +G
Sbjct: 640 SITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699

Query: 597 YLE 599
            ++
Sbjct: 700 PIQ 702



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 138/560 (24%), Positives = 247/560 (44%), Gaps = 25/560 (4%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQ 203
           ++L   S+  +   A    R +    + C P   S+  L+ A+ RA +  +A    + + 
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSI-LGCNPGIRSHNALLDAFVRARRFSDADAFFASLS 146

Query: 204 KAA----VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             A    +APNL   N  +  L     L +A+   + ++   + P+ +TY+ L+ G    
Sbjct: 147 HGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQ 206

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R+  A+ L+DEMP     PD V Y  ++G   K    ++V  + +K+V D         
Sbjct: 207 DRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266

Query: 312 -NLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            N+  D     GR +E  E+  +M      PDV+TY  +++G CR G++D A ++  ++ 
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G   +   Y + + G C  G+  EA +  +++       N  TY++++ GL   G + 
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVD 385

Query: 427 EACDVVREMVKK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
           EA ++   + K     P  V    LI  LC+ G  + A    +E    G  ++V +++S+
Sbjct: 386 EAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSM 445

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G C  G L +A+ + + M      P++  Y  +I    +  R  +A  +  KM   G 
Sbjct: 446 INGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGC 505

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGK 603
            PTV+TY T+I   C+  + ++   +  +M+        T Y  +I  L S   +++A  
Sbjct: 506 SPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALS 565

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF-NRNLIPDLKLCKKVSERL 662
           I  ++L    K D    ++L+    + G    A  V   M   +N  P+L     + + L
Sbjct: 566 IWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGL 625

Query: 663 ILEGKSEEADTLMLRFVERG 682
              G  ++A TL     E G
Sbjct: 626 YETGYIDKAATLWTSITEDG 645


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 229/483 (47%), Gaps = 27/483 (5%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           ML +L+   +    + +L+ M   G   RP     L+ AY R  K  +A  + +  +  A
Sbjct: 1   MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
            +P +      I +LV   +  +A    +++   G   +   YN LI+ +    ++  A+
Sbjct: 61  CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAM 120

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKEL 326
           ++  EM +KG  PD+ +Y    G+L                    N     GR++EA+  
Sbjct: 121 EMFREMKIKGSEPDEYTY----GFLV-------------------NALGKAGRVQEARSF 157

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
            + M + G  P++ TY  +++ F +VG+LD A  +  +M   G +P+ V+Y   L+ LC 
Sbjct: 158 FDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCS 217

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G+   AR++ +    +  +P++ TYS +++GL + G++ EA  V REMV +G     V 
Sbjct: 218 AGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVN 277

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            N L+ +L + G MD   K M+E   KG   +  +F +++    +    + A  +   M 
Sbjct: 278 YNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMV 337

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                PD ++Y  +ID+ ++ G   +A +++ +M+  G +P   TY ++IH     G+V+
Sbjct: 338 ESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVD 397

Query: 567 DLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           +   +LE+M     CR     YN++++ L   G  + A ++  ++     + D  +  V 
Sbjct: 398 EAFAVLEEM-ETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVR 456

Query: 624 VES 626
           ++ 
Sbjct: 457 IDG 459



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/502 (24%), Positives = 232/502 (46%), Gaps = 22/502 (4%)

Query: 104 RSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYM--MLEILSKTKLCQGAK 161
           R L+P  +  ++ +      +   F   ++   +   P V+    +++IL  +   + A+
Sbjct: 26  RPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAE 85

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
            V + + ++G +    A++ L+  + R+G+L +AM +   M+     P+       ++ L
Sbjct: 86  LVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNAL 145

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
               ++ +A  F + M   G+TPN+ TYN L+  +  + ++  A+ L  EM  +G  P  
Sbjct: 146 GKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSV 205

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQ 329
           V+Y  ++  LC   R+   R L  KM  D             N     GR+EEA ++  +
Sbjct: 206 VTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFRE 265

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M   G   D+V Y +++    + G +D+  K++++M   G  P+  S+   ++ L    K
Sbjct: 266 MVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANK 325

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
              ARE+     E    P+ I+Y++++    R G  ++A  ++ EMV+ GF P     N 
Sbjct: 326 PDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNS 385

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI  L  +G++D A   ++E    GC  +VV +  L+    ++G+ + A  L   M    
Sbjct: 386 LIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKG 445

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
            +PDT++Y   ID L+ + R++EA  L   M + G       YR +I    + G  E   
Sbjct: 446 VEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEA 505

Query: 570 KL--------LEKMLSKQKCRT 583
           +L        +E  L+ QK +T
Sbjct: 506 QLKHESQFMPVESRLTSQKAKT 527



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 212/456 (46%), Gaps = 30/456 (6%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + PN L    LI  Y   ++  DA  L ++     CSP      TV  +           
Sbjct: 28  LRPNTLVK--LITAYGRGNKSGDAFDLFNQAESFACSP------TVHAFT---------- 69

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
            L++ +VN        G  E A+ +  ++ Q GC  D   Y  ++  F R G+LD A +M
Sbjct: 70  KLIDILVN-------SGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
            ++M   G +P+  +Y   +N L   G+  EAR   +   E   TPN  TY+++M   R+
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            G+L  A  +  EM ++GF P+ V  N+L+ +LC  G++  A+K   +    GC+ +   
Sbjct: 183 VGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYT 242

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +++L+ G  + G +EEA  +  +M       D V Y +++  L+K G ++   +LM +M 
Sbjct: 243 YSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMS 302

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYL 598
            KG  P   ++ T++    +  + +   ++  +M+ +  C+    +YN +I++   FG  
Sbjct: 303 RKGFHPDAFSFNTIMDALGKANKPDAAREVFARMV-ESGCKPDLISYNILIDSYARFGDA 361

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
            +A ++L +++      +  T + L+      G    A+ V   M      PD+    ++
Sbjct: 362 AQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRL 421

Query: 659 SERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQR 694
            + L   G+++ A  L  +  ++G ++P +  +  R
Sbjct: 422 MDMLGKRGENQRAARLFQQMKDKG-VEPDTLSYAVR 456


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 141/598 (23%), Positives = 270/598 (45%), Gaps = 50/598 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++    +      A+ VL +M   G++     ++  +V Y R   +  A  + 
Sbjct: 203 DVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLY 262

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  V  +++  +  +  L    + ++A      M   G  PN +TY  LI      
Sbjct: 263 EGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKA 322

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R K+ + L+ EM  +G   D V+Y  +M +L K+ +  EV+D +   ++D+        
Sbjct: 323 GRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTY 382

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               +       ++EA++++ +M +    P+VVT+++V+NGF + G LD+A +  + M  
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE 442

Query: 368 HGCKPNTVSYT-----------------------------------AFLNGLCHNGKSLE 392
            G  PN V+Y                                    + +NGL  NGK  E
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEE 502

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A  +   +     + + + Y+ ++ GL + G +  A    +E++ +   P  V  N+ I 
Sbjct: 503 AMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC  GK   AK  + E  N G   +   + ++I   C+KG+  +AL LL +M +    P
Sbjct: 563 CLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKP 622

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           + +TY T++  L   G VE+A  L+ +M+S G  P+ +T+R V+    Q  R++ +L + 
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 573 EKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           E M++       T YN +++ LC  G   +A  +L ++L +    D  T + L+  +   
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
                A+    +M ++N+ P++     +   L   G+  EA T+++  +E+  ++P +
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE-MEKSGLEPNN 799



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/537 (24%), Positives = 237/537 (44%), Gaps = 49/537 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K       K  LR      +      ++ L+ A  +A  +  A  VL
Sbjct: 343 DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVL 402

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++ +++PN++  ++ I+  V    L KA  +   M+  GI PNV+TY  LI G+   
Sbjct: 403 LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462

Query: 260 H-----------------------------------RIKDAIKLIDEMPLKGCSPDKVSY 284
                                               +I++A+ L  +    G S D V+Y
Sbjct: 463 QGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 285 YTVMGYLCKE----KRIKEVRDLMEK-MVNDS---NLFHD----QGRIEEAKELVNQMSQ 332
            T++  L K        K  ++LM++ M+ D+   N+F +     G+ +EAK ++ +M  
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRN 582

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           MG  PD  TY  ++   CR GE  +A K+L +M     KPN ++Y   + GL   G   +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A+ ++N      ++P+++T+  V+    +  +L    D+   M+  G        N L+Q
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC  G    A   ++E L  G A + + F +LI G C+   L+ A +    M      P
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           +  T+ T++  L   GR+ EA  ++++M   GL P  +TY  ++  + +     + ++L 
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLY 822

Query: 573 EKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            +M+ K      + YN +I +    G + +A ++   + +      + T  +LV  +
Sbjct: 823 CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 254/550 (46%), Gaps = 49/550 (8%)

Query: 136 RYR-HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKL 192
           R+R  DP     +L    + +L + A  +LR         RP   +Y  L+ A S     
Sbjct: 67  RFRPADPASLNALLYSHCRLRLLRPAIALLR-------SSRPTTVAYNILLAALSDHA-- 117

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP-NVLTYNC 251
            +A  VL+ M K  V  + +  NT +  L    ++  A    +R    GI   +V+ +N 
Sbjct: 118 -HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRG--GGIHALDVIGWNT 174

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI GYC +     A+ + D M  +G   D V Y T++   C+                  
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR------------------ 216

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 G+++ A+ +++ M + G  P+V TYT  +  +CR   +++A  + + M  +G  
Sbjct: 217 -----AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            + V+ +A + GLC +G+  EA  +    ++    PN +TY  ++  L + G+  E   +
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           + EMV +G     V    L+  L ++GK D  K  ++  L+   ++N V +T LI   C+
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCK 391

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
             +++EA  +L +M      P+ VT++++I+   K G +++ATE    M  +G+ P VVT
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y T+I  + +    +  L++   ML +  +  +   + ++  L   G +EEA  +     
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMAL----F 507

Query: 610 RTASKADASTCHV----LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
           + AS +  S  HV    L++     G    A+K    + +RN++PD  +       L + 
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCIL 567

Query: 666 GKSEEADTLM 675
           GK +EA +++
Sbjct: 568 GKFKEAKSIL 577



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 12/360 (3%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GK + A  +L+ M+   + P+    NT I       + AKAL+ L  M+++ I PN++TY
Sbjct: 568 GKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N L+ G      ++ A  L++EM   G SP  +++  V+    + +R+  + D+ E M+N
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687

Query: 310 -----DSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                D  +++         G   +A  ++ +M   G  PD +T+ A++ G C+   LD 
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDN 747

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A     QM H    PN  ++   L GL   G+  EA  ++   E+    PN +TY +++ 
Sbjct: 748 AFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVT 807

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  ++    EA  +  EMV KGF P     N LI    + G M  AK+  ++   +G   
Sbjct: 808 GHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHP 867

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
               +  L+ G+ +  +  E    L DM      P   T + I  A SK G   +A  L+
Sbjct: 868 TSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 183/412 (44%), Gaps = 24/412 (5%)

Query: 44  DDHFMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLL 103
           D  F   D    ++  +E + R +L +    +  +  +C L + + A S  +  E+RN+ 
Sbjct: 527 DGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKS--ILTEMRNM- 583

Query: 104 RSLKPRQ------ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
             LKP Q      I +  R + +   AL+  +   +    + + I Y  ++  L  T   
Sbjct: 584 -GLKPDQSTYNTMIVSHCR-KGETAKALKLLHEM-KMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           + AK +L  M   G          ++ A S++ +L   + +   M  A +  ++ + NT 
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           + VL       KA   LE M  +GI P+ +T+N LI G+C    + +A     +M  +  
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFHD--------QGRIEEAKE 325
           SP+  ++ T++G L    RI E   ++ +M    +  +NL +D        Q    EA  
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMR 820

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L  +M   G +P V TY A+++ F + G + QAK++ + M   G  P + +Y   ++G  
Sbjct: 821 LYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWS 880

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
                 E ++ +   +E+ ++P+  T S +     + G   +A  +++ + +
Sbjct: 881 RIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 227/471 (48%), Gaps = 27/471 (5%)

Query: 109 RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA 168
           R +CA  R+  DE VAL     A      R D + Y  ++  L       GA  +L  M 
Sbjct: 123 RGLCASRRT--DEAVALLRSMQASG---VRADVVTYGTLIRGLCDAAELDGALELLGEMC 177

Query: 169 RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
             G+      +S L+  Y R+G+ ++   V   M +  V P++++    I  L    ++ 
Sbjct: 178 GSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIG 237

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           KA++  + M   G+ PNV+TYN LI   C    +++A+ L +EM  KG +PD V+Y T++
Sbjct: 238 KAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLI 297

Query: 289 GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             L     +     L+E+M+    L                       PDVVT+ +V++G
Sbjct: 298 AGLSGVLEMDGAMGLLEEMIQGDTLVE---------------------PDVVTFNSVIHG 336

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
            C++G + QA  + + M   GC  N V+Y   + G     K   A  +++        P+
Sbjct: 337 LCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPD 396

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
           + TYS++++G  +  ++  A   +R M ++G          L+ +LC+ G M+ A     
Sbjct: 397 SFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFN 456

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E ++  C ++ V +++++ G C+ GD++ A  LL DM      PD VTY+ +I+  +K G
Sbjct: 457 E-MDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLG 515

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
            +EEA  ++ +M + G VP V  + ++I  Y   G++  +L L+ +M +K 
Sbjct: 516 DLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKN 566



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 235/502 (46%), Gaps = 36/502 (7%)

Query: 177 EAFSYLMVAYS---RAGKLRNAMYVLSMMQK---AAVAPNLLICNTAIHVLVVGNKLAKA 230
           +A SY +V  +   R G LR A+ +L+ M +    A  PN +     +  L    +  +A
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           +  L  MQ +G+  +V+TY  LI+G CD   +  A++L+ EM   G  P+ + Y  ++  
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            C+  R ++V  + E                       +MS++G  PDV+ +T  ++  C
Sbjct: 195 YCRSGRWQDVSKVFE-----------------------EMSRLGVEPDVIMFTGFIDDLC 231

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           + G + +A K+   M   G +PN V+Y   +N LC  G   EA  + N  +++   P+ +
Sbjct: 232 KKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVV 291

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFF--PTPVEINLLIQSLCREGKMDGAKKFMQ 468
           TY+ ++ GL    ++  A  ++ EM++      P  V  N +I  LC+ G+M  A    +
Sbjct: 292 TYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVRE 351

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
               +GC  N+V +  LI GF +   +  A++L+ ++     +PD+ TY+ +I+  SK  
Sbjct: 352 MMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLW 411

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAY 585
            V+ A   +  M  +G+   +  Y  ++   CQ+G +E  + L  +M     C     AY
Sbjct: 412 EVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM--DMNCGLDAVAY 469

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           + ++   C  G ++ A ++L  +L      DA T  +L+  +   G    A +V  +M  
Sbjct: 470 STMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAA 529

Query: 646 RNLIPDLKLCKKVSERLILEGK 667
              +PD+ +   + +    EG+
Sbjct: 530 SGFVPDVAVFDSLIKGYSAEGQ 551



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 163/351 (46%), Gaps = 8/351 (2%)

Query: 309 NDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR-VGELDQAKKMLQQM-- 365
           + + L + + R     E  + +S +  + D V+Y  V+   CR  G+L QA  +L  M  
Sbjct: 46  DAAALLNRRLRAAPVTEACSLLSALPDVRDAVSYNIVLAALCRRGGDLRQALSLLADMSR 105

Query: 366 -YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
             H   +PN VSYT  + GLC + ++ EA  ++ + +      + +TY  ++ GL    +
Sbjct: 106 EAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAE 165

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L  A +++ EM   G  P  +  + L++  CR G+     K  +E    G   +V+ FT 
Sbjct: 166 LDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTG 225

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
            I   C+KG + +A+ + D M     +P+ VTY  +I+ L K G V EA  L  +M  KG
Sbjct: 226 FIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKG 285

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC----RTAYNQVIENLCSFGYLEE 600
           + P VVTY T+I     V  ++  + LLE+M+            +N VI  LC  G + +
Sbjct: 286 VAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQ 345

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           A  +   +       +  T + L+  +L      +A  +   + +  L PD
Sbjct: 346 AISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPD 396



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 163/363 (44%), Gaps = 52/363 (14%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I++   ++ L K      A +V  +M +RG+E     ++ L+    + G +R A+ + 
Sbjct: 219 DVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALR 278

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT---PNVLTYNCLIKGY 256
           + M    VAP+++  NT I  L    ++  A+  LE M + G T   P+V+T+N +I G 
Sbjct: 279 NEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEM-IQGDTLVEPDVVTFNSVIHGL 337

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND------ 310
           C + R++ AI + + M  +GC  + V+Y  ++G   +  ++    +LM ++++       
Sbjct: 338 CKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDS 397

Query: 311 --------------------------------SNLFH---------DQGRIEEAKELVNQ 329
                                           + LFH           G +E+A  L N+
Sbjct: 398 FTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNE 457

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M  M C  D V Y+ ++ G C+ G++  AK++LQ M   G  P+ V+Y+  +N     G 
Sbjct: 458 M-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGD 516

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             EA  ++       + P+   +  ++ G   EG++++  D++ EM  K     P  I  
Sbjct: 517 LEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAIDPKFICT 576

Query: 450 LIQ 452
           L++
Sbjct: 577 LVR 579


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 189/370 (51%), Gaps = 23/370 (6%)

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
             FS+ +    +   +  AM +L  M+     P+++  N  I+ +    +L +A++FL  
Sbjct: 83  SGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 142

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M   G  PNV+T+N +++  C   R  DA KL+ +M  KGCSP  V++  ++ +LC+   
Sbjct: 143 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR--- 199

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                               QG +  A +++ +M   GC P+ ++Y  +++GFC+  ++D
Sbjct: 200 --------------------QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMD 239

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A + L  M   GC P+ V+Y   L  LC +GK   A E++N    +  +P  ITY+ V+
Sbjct: 240 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVI 299

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            GL + GK   A  ++ EM +KG  P  +  + L+  L REGK+D A KF  +    G  
Sbjct: 300 DGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIR 359

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            N + + S++ G C+    + A+  L  M   +  P   TYT +I+ ++  G  +EA +L
Sbjct: 360 PNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDL 419

Query: 537 MMKMLSKGLV 546
           + ++ S+GLV
Sbjct: 420 LNELCSRGLV 429



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 188/362 (51%), Gaps = 25/362 (6%)

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           ++  ++  C    +  A+KL+DEM  KG  PD V+Y  ++  +CKE              
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE-------------- 130

Query: 309 NDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                    GR++EA + +N M   GC P+V+T+  ++   C  G    A+K+L  M   
Sbjct: 131 ---------GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK 181

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           GC P+ V++   +N LC  G    A +++        TPN+++Y+ ++HG  +E K+  A
Sbjct: 182 GCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRA 241

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            + +  MV +G +P  V  N L+ +LC++GK+D A + + +  +KGC+  ++ + ++I G
Sbjct: 242 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 301

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
             + G  E A+ LLD+M      PD +TY++++  LS+ G+V+EA +    +   G+ P 
Sbjct: 302 LSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPN 361

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
            +TY +++   C+  + +  +  L  M+SK  +     Y  +IE +   G  +EA  +L 
Sbjct: 362 AITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLN 421

Query: 607 KV 608
           ++
Sbjct: 422 EL 423



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 185/352 (52%), Gaps = 23/352 (6%)

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +A++ L+ M+  G  P+V+TYN LI G C   R+ +AIK ++ MP  GC P+ +++  
Sbjct: 98  VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 157

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  +C                         GR  +A++L++ M + GC P VVT+  ++
Sbjct: 158 ILRSMC-----------------------STGRWMDAEKLLSDMLRKGCSPSVVTFNILI 194

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           N  CR G L +A  +L++M  HGC PN++SY   L+G C   K   A E ++        
Sbjct: 195 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY 254

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ +TY+ ++  L ++GK+  A +++ ++  KG  P  +  N +I  L + GK + A K 
Sbjct: 255 PDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKL 314

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           + E   KG   +++ ++SL+ G  ++G ++EA+    D+      P+ +TY +I+  L K
Sbjct: 315 LDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCK 374

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           + + + A + +  M+SK   PT  TY  +I      G  ++ L LL ++ S+
Sbjct: 375 SRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 426



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 183/332 (55%), Gaps = 2/332 (0%)

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           + +A +L+++M   G  PDVVTY  ++NG C+ G LD+A K L  M  +GC+PN +++  
Sbjct: 98  VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 157

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L  +C  G+ ++A ++++    +  +P+ +T++++++ L R+G L  A D++ +M   G
Sbjct: 158 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 217

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  +  N L+   C+E KMD A +++   +++GC  ++V + +L+   C+ G ++ A+
Sbjct: 218 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 277

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +L+ +      P  +TY T+ID LSK G+ E A +L+ +M  KGL P ++TY +++   
Sbjct: 278 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 337

Query: 560 CQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
            + G+V++ +K    +  L  +     YN ++  LC     + A   L  ++    K   
Sbjct: 338 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE 397

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           +T  +L+E    +G+   A  +   + +R L+
Sbjct: 398 ATYTILIEGIAYEGLAKEALDLLNELCSRGLV 429



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 174/339 (51%), Gaps = 27/339 (7%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNA 195
           + D + Y +++  + K      A + L  M   G  C+P   ++ ++  S    G+  +A
Sbjct: 114 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG--CQPNVITHNIILRSMCSTGRWMDA 171

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +LS M +   +P+++  N  I+ L     L +A+  LE+M + G TPN L+YN L+ G
Sbjct: 172 EKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHG 231

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           +C   ++  AI+ +D M  +GC PD V+Y T++  LCK+                     
Sbjct: 232 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKD--------------------- 270

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G+++ A E++NQ+S  GC P ++TY  V++G  +VG+ ++A K+L +M   G KP+ +
Sbjct: 271 --GKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDII 328

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y++ ++GL   GK  EA +  +  E     PNAITY+ +M GL +  +   A D +  M
Sbjct: 329 TYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 388

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           + K   PT     +LI+ +  EG    A   + E  ++G
Sbjct: 389 ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 427



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 143/298 (47%), Gaps = 37/298 (12%)

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            ++ ++   C      +A ++++    +   P+ +TY+V+++G+ +EG+L EA   +  M
Sbjct: 84  GFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 143

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              G  P  +  N++++S+C  G+   A+K + + L KGC+ +VV F  LI   C++G L
Sbjct: 144 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 203

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
             A+ +L+ M +    P++++Y  ++    K  +++ A E +  M+S+G  P +VTY T+
Sbjct: 204 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 263

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +   C+ G+V+  +++L ++ SK        YN VI+ L   G  E A K+L ++ R   
Sbjct: 264 LTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 323

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           K D  T   LV                                     L  EGK +EA
Sbjct: 324 KPDIITYSSLVSG-----------------------------------LSREGKVDEA 346


>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
 gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 235/496 (47%), Gaps = 20/496 (4%)

Query: 102 LLRSLKPRQICAVLRS---QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
            L  L P  +  VL+S   Q    +AL+FF WA +Q +Y H+   Y   +++L+      
Sbjct: 55  FLIKLSPNFVSFVLKSMELQKRPDLALKFFTWAGKQKKYTHNLQCYVSSIDVLAINGDLD 114

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
             K V       G      A + L+ ++   G +   ++V   M++  V P+L   N  +
Sbjct: 115 NVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLL 174

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
           + LV    +  A R LE M+   I P+V+TYN +IKGYC + + + A +   +M L+  +
Sbjct: 175 NGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVA 234

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH--------------DQGRIEEAK 324
           PDK++Y T++     E        L  +M  D N                  +G+  E  
Sbjct: 235 PDKITYMTLIQACYAEGDFDLCLSLYHEM--DENGLEIPPHAYSLVIGGLCKEGKCVEGY 292

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            +  +M Q GC  +V  YTA+++   + G + +A  + ++M   G +P+ V+Y   +N +
Sbjct: 293 AVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCM 352

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C +G+  EA E +          NA+ YS ++ GL + G++ EA  +  EMVKKG  P  
Sbjct: 353 CKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDS 412

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
              N LI +L + GK D A  F +   ++GC   V  +T +I G  ++   EEAL + D 
Sbjct: 413 YCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDM 472

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      P    +  +   L  +G+V  A +L+ ++   G++P    +  +++  C+ GR
Sbjct: 473 MIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPE-TAFEDMLNVLCKAGR 531

Query: 565 VEDLLKLLEKMLSKQK 580
           +++  KL +  + + +
Sbjct: 532 IKEACKLADGFVDRGR 547



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 172/382 (45%), Gaps = 4/382 (1%)

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           F   G +EE   +   M + G  P + TY  ++NG      ++ A+++L+ M +    P+
Sbjct: 142 FGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPD 201

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            V+Y   + G C  GK+ +A E     E     P+ ITY  ++     EG       +  
Sbjct: 202 VVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYH 261

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM + G    P   +L+I  LC+EGK        ++ + KGC VNV  +T+LI    + G
Sbjct: 262 EMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCG 321

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           ++ EA+ L + M     +PD VTY  +++ + K+GR++EA E +      G+    + Y 
Sbjct: 322 NMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYS 381

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLR 610
           ++I    + GRV +  KL E+M+ K+ C      YN +I+ L   G  +EA     ++  
Sbjct: 382 SLIDGLGKAGRVHEAEKLFEEMV-KKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMED 440

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                   T  +++     +     A K+   M ++ + P     + +S  L L GK   
Sbjct: 441 EGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVAR 500

Query: 671 ADTLMLRFVERGHIQPKSEEHL 692
           A  L+      G I   + E +
Sbjct: 501 ACKLLDELAPMGVIPETAFEDM 522



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 151/321 (47%), Gaps = 2/321 (0%)

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           V+  ++    G ++  K +  +   MG + +V    +++  F  +G +++   + + M  
Sbjct: 101 VSSIDVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKE 160

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +G +P+  +Y   LNGL ++     A  ++   E     P+ +TY+ ++ G  + GK  +
Sbjct: 161 NGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQK 220

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A +  R+M  +   P  +    LIQ+   EG  D       E    G  +    ++ +I 
Sbjct: 221 AFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIG 280

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C++G   E  ++ + M       +   YT +ID+ +K G + EA  L  +M  +GL P
Sbjct: 281 GLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEP 340

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKIL 605
            VVTY  V++  C+ GR+++ ++ LE          A  Y+ +I+ L   G + EA K+ 
Sbjct: 341 DVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLF 400

Query: 606 GKVLRTASKADASTCHVLVES 626
            ++++     D+   + L+++
Sbjct: 401 EEMVKKGCPPDSYCYNALIDA 421


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 239/522 (45%), Gaps = 27/522 (5%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           +R    RH P  I +  +L+  +K K    A  +   +  +GI+      + L+  +   
Sbjct: 48  NRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHM 107

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G++     VL+ + K    P+ +  NT I  L +  ++ KAL F +++   G   N ++Y
Sbjct: 108 GQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY 167

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             LI G C +   + AIK + ++  +   PD V Y T++  +CK + +            
Sbjct: 168 ATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLV------------ 215

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                       EA  L ++M+  G   DVVTY  ++ GFC VG+L +A  +L +M    
Sbjct: 216 -----------SEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKT 264

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PN  +Y   ++ LC  GK  EA+ ++    +    P+ ITYS +M G     ++ +A 
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            V   M   G  P      +LI   C+   +D A    +E   K     +V ++SLI G 
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ G +     L+D+M    +  D +TY+++ID L KNG ++ A  L  KM  + + P +
Sbjct: 385 CKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNI 444

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGK 607
            T+  ++   C+ GR++D  ++ + +L+K        YN +I   C  G LEEA  +L K
Sbjct: 445 FTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSK 504

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           +       +A T   ++ +   K     A K+  +M  R L+
Sbjct: 505 MEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 203/416 (48%), Gaps = 14/416 (3%)

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A+    RM     TP ++ +N ++  +  +     A+ L   + LKG  PD ++   ++ 
Sbjct: 43  AVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILIN 102

Query: 290 YLCKEKRIKEVRDLMEKMVN-----DSNLFHD-------QGRIEEAKELVNQMSQMGCIP 337
             C   +I     ++ K++      D+   +        +G++++A    +++   G   
Sbjct: 103 CFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL 162

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           + V+Y  ++NG C++G+   A K L+++     KP+ V Y   ++ +C      EA  + 
Sbjct: 163 NQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLF 222

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +    +  + + +TY+ +++G    GKL EA  ++ EMV K   P     N+L+ +LC+E
Sbjct: 223 SEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           GK+  AK  +   L      +V+ +++L+ G+    ++++A  + + M L    PD  TY
Sbjct: 283 GKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTY 342

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           T +I+   KN  V+EA  L  +M  K +VP +VTY ++I   C+ GR+  +  L+++M  
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRD 402

Query: 578 KQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           + +      Y+ +I+ LC  G+L+ A  +  K+     + +  T  +L++     G
Sbjct: 403 RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGG 458



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/379 (20%), Positives = 172/379 (45%), Gaps = 8/379 (2%)

Query: 314 FHDQG-RIEEAKELVNQMSQMGCI---PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           FH Q   I+   + V+Q ++M C+   P ++ +  +++ F ++     A  +  ++   G
Sbjct: 30  FHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKG 89

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            +P+ ++    +N  CH G+      ++    +  + P+ +T + ++ GL  +G++ +A 
Sbjct: 90  IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKAL 149

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
               +++ +GF    V    LI  +C+ G    A KF+++   +    +VV + ++I   
Sbjct: 150 HFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAM 209

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+   + EA  L  +M +     D VTY T+I      G+++EA  L+ +M+ K + P V
Sbjct: 210 CKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNV 269

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
            TY  ++   C+ G+V++   +L  ML    +     Y+ +++       +++A  +   
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +       D  T  +L+  +    +   A  +   M  +N++P +     + + L   G+
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 668 SEEADTLMLRFVERGHIQP 686
                 L+    +RG  QP
Sbjct: 390 ISYVWDLIDEMRDRG--QP 406


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 233/483 (48%), Gaps = 18/483 (3%)

Query: 163 VLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
           ++R M R      P+AFSY  ++    R+GK  +A+ V   M    V PN +  NT I  
Sbjct: 1   MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 60

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
            V G  L    R  ++M   G  PN++TYN L+ G C   R+ +   L+DEM      PD
Sbjct: 61  HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 120

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVN 328
             +Y  +   L +    + +  L  + +               N     G++ +A++++ 
Sbjct: 121 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 180

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            +   G +P  V Y  ++NG+C+V +L  A  + +QM     +P+ ++Y A +NGLC   
Sbjct: 181 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 240

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              +A +++   E+    P+  T++ ++      G+L +   V+ +M +KG     +   
Sbjct: 241 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 300

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            ++++ C+ GK+  A   + + + K  A N   + S+I  + + GD E+A  L++ M   
Sbjct: 301 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS 360

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
                 VTY  ++  L ++ +++EA EL+  + ++GL P VV+Y T+I   C  G  +  
Sbjct: 361 GVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKA 420

Query: 569 LKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           L+LL++M +K   R     Y+ ++  L S G + +   +  ++L    +  +S   ++V+
Sbjct: 421 LELLQEM-NKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVD 479

Query: 626 SYL 628
           +Y+
Sbjct: 480 AYV 482



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 189/373 (50%), Gaps = 12/373 (3%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            G+  +A ++ ++M  MG +P+ +TY  +++G  + G+L+   ++  QM H G KPN V+
Sbjct: 29  SGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVT 88

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   L+GLC  G+  E R +++        P+  TYS++  GL R G+      +  E +
Sbjct: 89  YNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESL 148

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           KKG        ++L+  LC++GK+  A++ ++  ++ G     V + +LI G+CQ  DL 
Sbjct: 149 KKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLR 208

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            A  + + M      PD +TY  +I+ L K   V +A +L+M+M   G+ P+V T+ T+I
Sbjct: 209 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 268

Query: 557 HRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
             Y   G++E    +L  M  K  +    ++  V++  C  G + EA  IL  ++     
Sbjct: 269 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 328

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG-----KSE 669
            +A   + ++++Y+  G    A+ +  +M N  +   +     V+  L+L+G     + +
Sbjct: 329 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASI-----VTYNLLLKGLCRSSQID 383

Query: 670 EADTLMLRFVERG 682
           EA+ L+     +G
Sbjct: 384 EAEELIYTLRNQG 396



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 187/388 (48%), Gaps = 25/388 (6%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+ F+Y  L    +R G+ R  + + +   K  V      C+  ++ L    K+AKA + 
Sbjct: 119 PDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQV 178

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           LE +   G+ P  + YN LI GYC +  ++ A  + ++M  +   PD ++Y  ++  LCK
Sbjct: 179 LEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 238

Query: 294 EKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
            + + +                       A++LV +M + G  P V T+  +++ +   G
Sbjct: 239 LEMVTK-----------------------AEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 275

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           +L++   +L  M   G K + +S+ + +   C NGK  EA  +++    +   PNA  Y+
Sbjct: 276 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 335

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++      G   +A  +V +M   G   + V  NLL++ LCR  ++D A++ +    N+
Sbjct: 336 SIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 395

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   +VV++ ++I   C KGD ++AL LL +M      P   TY T++ AL+  GRV + 
Sbjct: 396 GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDM 455

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
             L  +ML K + P+   Y  ++  Y +
Sbjct: 456 ECLYQQMLHKNVEPSSSIYGIMVDAYVR 483



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/488 (22%), Positives = 215/488 (44%), Gaps = 26/488 (5%)

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            + A  P+    N  I  L    K + AL+  + M   G+ PN +TYN +I G+     +
Sbjct: 8   SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDL 67

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
           +   +L D+M   G  P+ V+Y  ++  LC+                        GR++E
Sbjct: 68  EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCR-----------------------AGRMDE 104

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
            + L+++M+     PD  TY+ + +G  R GE      +  +    G      + +  LN
Sbjct: 105 TRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLN 164

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC +GK  +A +++         P  + Y+ +++G  +   L  A  +  +M  +   P
Sbjct: 165 GLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRP 224

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             +  N LI  LC+   +  A+  + E    G   +V  F +LI  +   G LE+  ++L
Sbjct: 225 DHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVL 284

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
            DM       D +++ +++ A  KNG++ EA  ++  M+ K + P    Y ++I  Y + 
Sbjct: 285 SDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIES 344

Query: 563 GRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           G  E    L+EKM +     +   YN +++ LC    ++EA +++  +     + D  + 
Sbjct: 345 GDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSY 404

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
           + ++ +  NKG    A ++   M    + P L+    +   L   G+  + + L  + + 
Sbjct: 405 NTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLH 464

Query: 681 RGHIQPKS 688
           + +++P S
Sbjct: 465 K-NVEPSS 471



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 163/348 (46%), Gaps = 18/348 (5%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           ++L  L K      A++VL ++   G+      ++ L+  Y +   LR A  +   M+  
Sbjct: 161 ILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 220

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            + P+ +  N  I+ L     + KA   +  M+ +G+ P+V T+N LI  Y    +++  
Sbjct: 221 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 280

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NL 313
             ++ +M  KG   D +S+ +V+   CK  +I E   +++ M+               + 
Sbjct: 281 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 340

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           + + G  E+A  LV +M   G    +VTY  ++ G CR  ++D+A++++  + + G +P+
Sbjct: 341 YIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 400

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            VSY   ++  C+ G + +A E++    +    P   TY  ++  L   G++ +   + +
Sbjct: 401 VVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQ 460

Query: 434 EMVKKGFFPTPVEINLLIQSLCR---EGKMDGAKKFMQECLNKGCAVN 478
           +M+ K   P+     +++ +  R   + K+   KK M E   KG A +
Sbjct: 461 QMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSE---KGIAFD 505



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 142/310 (45%), Gaps = 26/310 (8%)

Query: 134 QWRYRH---DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
           Q + RH   D I Y  ++  L K ++   A+ ++  M + G++   E F+ L+ AY  AG
Sbjct: 216 QMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 275

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +L     VLS MQ+  +  +++   + +       K+ +A+  L+ M    + PN   YN
Sbjct: 276 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 335

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            +I  Y +    + A  L+++M   G S   V+Y  ++  LC+                 
Sbjct: 336 SIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSS--------------- 380

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                   +I+EA+EL+  +   G  PDVV+Y  +++  C  G+ D+A ++LQ+M  +G 
Sbjct: 381 --------QIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 432

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P   +Y   ++ L   G+  +   +      +   P++  Y +++    R    S+   
Sbjct: 433 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 492

Query: 431 VVREMVKKGF 440
           + +EM +KG 
Sbjct: 493 LKKEMSEKGI 502



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 36/177 (20%), Positives = 72/177 (40%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
           VY  +++   ++   + A  ++  M   G+      ++ L+    R+ ++  A  ++  +
Sbjct: 333 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 392

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
           +   + P+++  NT I          KAL  L+ M   GI P + TY+ L+       R+
Sbjct: 393 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRV 452

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            D   L  +M  K   P    Y  ++    + +   +V  L ++M      F D  R
Sbjct: 453 HDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDTKR 509


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 228/487 (46%), Gaps = 17/487 (3%)

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
           + LM  Y    ++R A+ +     +  + P  +     I          KA     +M+ 
Sbjct: 286 TTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRD 345

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
            G+ P+   +N +IKG  +    KDA+ L  EM   G  PD  +Y  ++ +LC+ ++I+E
Sbjct: 346 HGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIRE 404

Query: 300 VRDLMEKMVNDSNL------FHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
             +L EKM N++ +      +H         G ++EA +L  +M   G  P+VVTYT ++
Sbjct: 405 ALNLWEKM-NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLM 463

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
            G       D+A  +L +M  +G   N  +Y   +NGLC  G+  E  EM+   E E + 
Sbjct: 464 KGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFV 523

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P A+TY+ +++G  + G +  A  V ++M  KG  P  V     I   C+    D A K 
Sbjct: 524 PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKM 583

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           + +   KG   ++  + SLI GFCQ+G++  AL +L  M      P+   Y + I     
Sbjct: 584 LNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKN 643

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTA 584
              +EEA     KM+ +G+     TY T+I  + + G V   LKL  +M++K        
Sbjct: 644 LKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHIT 703

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           +  +   LC  G +++A K+L ++ R   + +    ++L+  YL  G    A+++   M 
Sbjct: 704 FTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEML 763

Query: 645 NRNLIPD 651
            R ++PD
Sbjct: 764 ERKIMPD 770



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 231/474 (48%), Gaps = 14/474 (2%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           Q + R AL  F    R      D + Y +++   ++  + + A  + R M   G+     
Sbjct: 295 QREVRKALDIFEETLRDGLVPTD-VTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            F+ ++         ++A+ +   M  + + P+    N  IH L    K+ +AL   E+M
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKM 412

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G+ P ++TY+ L+  YC    + +A+KL  EMP KG +P+ V+Y T+M     +   
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472

Query: 298 KEVRDLMEKMVNDSNLFHDQ------------GRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            +   L+ +M  +    +D             GR+ E  E++ +    G +P  +TY ++
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           +NGF + G +  A  + QQM   G  PN V+YT+F++G C       A +M+N    +  
Sbjct: 533 INGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGL 592

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+   Y+ +++G  +EG +S A  V+  M+K G  P     N  I        M+ A +
Sbjct: 593 RPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALR 652

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
           F ++ + +G  ++   +T+LI GF + G++  AL L  +M      PD +T+T +   L 
Sbjct: 653 FYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLC 712

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +NG +++A +L+ +M    + P V+ Y  +I+ Y + G++++  +L ++ML ++
Sbjct: 713 RNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERK 766



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 208/427 (48%), Gaps = 17/427 (3%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY--SRAGKLRNAMYVLSM 201
           + M+++ L   KL + A  + + MA  GI   P+AF+Y ++ +   +  K+R A+ +   
Sbjct: 355 FNMVIKGLLNDKLWKDAVSLFKEMADSGI---PDAFTYNILIHWLCQRRKIREALNLWEK 411

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  V P ++  ++ +    V   + +A++    M   G TPNV+TY  L+KG+ +   
Sbjct: 412 MNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAA 471

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
              A  L+ EM   G S +  +Y T++  LC   R+ EV +++++   +           
Sbjct: 472 FDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNS 531

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             N F   G +  A  +  QM   G  P++VTYT+ ++G+C+    D A KML  +   G
Sbjct: 532 IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG 591

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            +P+  +Y + + G C  G    A +++    ++   PN   Y+  + G +    + EA 
Sbjct: 592 LRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
               +M+K+G          LI    ++G +  A K   E + KG   + + FT+L  G 
Sbjct: 652 RFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGL 711

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ GD+++A  LLD+M      P+ + Y  +I+   +NG+++EA  L  +ML + ++P  
Sbjct: 712 CRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDD 771

Query: 550 VTYRTVI 556
            TY  ++
Sbjct: 772 TTYDILV 778



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 150/563 (26%), Positives = 240/563 (42%), Gaps = 123/563 (21%)

Query: 184 VAYSRAGKLRNA---MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
           VA +   KLR+A   + VL  MQ A   P     N+ + VLV G ++ +AL   + +   
Sbjct: 217 VAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLAT 276

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE- 299
           G   +V+    L+ GYC    ++ A+ + +E    G  P  V+ YTV+   C E+ + E 
Sbjct: 277 GKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVT-YTVLIRGCTEEGMPEK 335

Query: 300 -------VRD------------LMEKMVNDS------NLFH---DQG------------- 318
                  +RD            +++ ++ND       +LF    D G             
Sbjct: 336 AYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHW 395

Query: 319 -----RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                +I EA  L  +M++ G  P +VTY +++  +C  G +D+A K+  +M   G  PN
Sbjct: 396 LCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPN 455

Query: 374 TVSYTAFL-----------------------------------NGLCHNGKSLEAREMIN 398
            V+YT  +                                   NGLC  G+  E  EM+ 
Sbjct: 456 VVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLK 515

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
             E E + P A+TY+ +++G  + G +  A  V ++M  KG  P  V     I   C+  
Sbjct: 516 RFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTS 575

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD------------------------ 494
             D A K + +   KG   ++  + SLI GFCQ+G+                        
Sbjct: 576 CCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYN 635

Query: 495 -----------LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
                      +EEAL   + M     D DT TYTT+ID  SK+G V  A +L  +M++K
Sbjct: 636 SFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAK 695

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEA 601
           G +P  +T+  + H  C+ G ++D  KLL++M  L  +     YN +I      G L+EA
Sbjct: 696 GNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEA 755

Query: 602 GKILGKVLRTASKADASTCHVLV 624
            ++  ++L      D +T  +LV
Sbjct: 756 FRLHDEMLERKIMPDDTTYDILV 778



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/545 (23%), Positives = 232/545 (42%), Gaps = 48/545 (8%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F  +M A  + G   +A+ +   M  + + P+  +C+ AI  L       +AL  L +MQ
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
            AG  P   T+N ++       R+++A+ + DE+   G     V   T+M   C ++ ++
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299

Query: 299 EVRDLMEKMVNDSNLFHD------------QGRIEEAKELVNQMSQMGC----------- 335
           +  D+ E+ + D  +  D            +G  E+A EL  QM   G            
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359

Query: 336 -----------------------IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                                  IPD  TY  +++  C+  ++ +A  + ++M   G KP
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKP 419

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
             V+Y + L   C NG   EA ++      + +TPN +TY+ +M G   +    +A  ++
Sbjct: 420 YIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALL 479

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            EM + G        N LI  LC  G++    + ++    +G     + + S+I GF + 
Sbjct: 480 AEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKA 539

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G +  A ++   M      P+ VTYT+ ID   K    + A +++  +  KGL P +  Y
Sbjct: 540 GMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAY 599

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLR 610
            ++I+ +CQ G +   L++L  ML        + YN  I    +   +EEA +   K+++
Sbjct: 600 NSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIK 659

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                D +T   L++ +   G    A K+   M  +  IPD      ++  L   G  ++
Sbjct: 660 EGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDD 719

Query: 671 ADTLM 675
           A  L+
Sbjct: 720 ARKLL 724



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 67/147 (45%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
           VY   +      K+ + A R    M + GI+     ++ L+  +S+ G +  A+ + S M
Sbjct: 633 VYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEM 692

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
                 P+ +      H L     +  A + L+ M    I PNVL YN LI GY    ++
Sbjct: 693 VAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKL 752

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           ++A +L DEM  +   PD  +Y  ++G
Sbjct: 753 QEAFRLHDEMLERKIMPDDTTYDILVG 779



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 3/220 (1%)

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           +A  + VVM    +EG   +A  +  EM      P     ++ I SLC+    + A   +
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
           ++  + G       F S++    + G +EEAL + D++    K    V  TT++      
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAY 585
             V +A ++  + L  GLVPT VTY  +I    + G  E   +L  +M           +
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           N VI+ L +    ++A  +  K +  +   DA T ++L+ 
Sbjct: 356 NMVIKGLLNDKLWKDAVSLF-KEMADSGIPDAFTYNILIH 394



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 98/219 (44%), Gaps = 8/219 (3%)

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E   KG  ++   F  ++R   ++G  ++A+ L D+M   + +PD    +  I +L K  
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV 588
               A  ++ KM   G VP   T+ +V+    + GR+E+ L + +++L+  K     + V
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGK---KMSVV 283

Query: 589 IENLCSFGY-----LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
           +      GY     + +A  I  + LR        T  VL+     +G+P  AY++  +M
Sbjct: 284 LATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM 343

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +  L+P       V + L+ +   ++A +L     + G
Sbjct: 344 RDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG 382



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 64/143 (44%)

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM  KG        ++++++  +EG  D A +   E        +    +  I   C+  
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           D   AL +L  M      P   T+ +++D L K GR+EEA  +  ++L+ G   +VV   
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 554 TVIHRYCQVGRVEDLLKLLEKML 576
           T++H YC    V   L + E+ L
Sbjct: 287 TLMHGYCLQREVRKALDIFEETL 309


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 234/489 (47%), Gaps = 37/489 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I++ +++    + ++   A     LM  +G   + E  ++++   SR  ++ NA    + 
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  +  N+   N  I+VL    KL KA  FL  M++ GI P ++TYN L++G+    R
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           I+ A  +I EM  KG  PD  +Y  ++ ++C E R                         
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR------------------------- 310

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A E++ +M ++G +PD V+Y  ++ G    G+L+ A     +M   G  P   +Y   +
Sbjct: 311 -ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLI 369

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +GL    K   A  +I    E+    +++TY+++++G  + G   +A  +  EM+  G  
Sbjct: 370 HGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQ 429

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           PT      LI  LCR+ K   A +  ++ + KG   ++V   +L+ G C  G+++ A SL
Sbjct: 430 PTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSL 489

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L +M +   +PD VTY  ++  L   G+ EEA ELM +M  +G+ P  ++Y T+I  Y +
Sbjct: 490 LKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 549

Query: 562 VGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKA---- 615
            G  +    + ++MLS     T   YN +++ L       + G++  ++LR         
Sbjct: 550 KGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSK----NQEGELAEELLREMKSEGIVP 605

Query: 616 -DASTCHVL 623
            D+S C V+
Sbjct: 606 NDSSFCSVI 614



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 223/453 (49%), Gaps = 29/453 (6%)

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
           T + + ++ L++  C L  + +AI+    M  KG  P   +   ++  L +  RI+    
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211

Query: 303 L---MEKMVNDSNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
               M +M   SN++           +G++++AK  +  M   G  P +VTY  +V GF 
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
             G ++ A+ ++ +M   G +P+  +Y   L+ +C+ G+   A E++   +E    P+++
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSV 328

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           +Y++++ G    G L  A     EMVK+G  PT    N LI  L  E K++ A+  ++E 
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 388

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
             KG  ++ V +  LI G+CQ GD ++A +L D+M      P   TYT++I  L +  + 
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT 448

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQV 588
            EA EL  K++ KG+ P +V   T++  +C +G ++    LL++M  +S       YN +
Sbjct: 449 READELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCL 508

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM----F 644
           +  LC  G  EEA +++G++ R   K D  + + L+  Y  KG    A+ V   M    F
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568

Query: 645 NRNLIPDLKLCKKVS--------ERLILEGKSE 669
           N  L+    L K +S        E L+ E KSE
Sbjct: 569 NPTLLTYNALLKGLSKNQEGELAEELLREMKSE 601



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 5/293 (1%)

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           EA E     +E+ + P   T + ++  L R  ++  A     +M +          N++I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LC+EGK+  AK F+      G    +V + +L++GF  +G +E A  ++ +M      
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD  TY  I+  +   GR   A+E++ +M   GLVP  V+Y  +I      G +E     
Sbjct: 293 PDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349

Query: 572 LEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
            ++M+ +    T   YN +I  L     +E A  ++ ++       D+ T ++L+  Y  
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            G    A+ +   M    + P       +   L  + K+ EAD L  + V +G
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  ++  L      + A+ ++  M RRGI  +P+  SY  L+  YS+ G  ++A  
Sbjct: 501 DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI--KPDHISYNTLISGYSKKGDTKHAFM 558

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   M      P LL  N  +  L    +   A   L  M+  GI PN  ++  +I+   
Sbjct: 559 VRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618

Query: 258 DL 259
           +L
Sbjct: 619 NL 620


>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera]
 gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 216/472 (45%), Gaps = 67/472 (14%)

Query: 110 QICAVLRSQADERVALQFFYWADRQWR--YRHDPIVYYMMLEILSKTKLCQGAKRVLRLM 167
           Q+  +++++ D + A+  F  A  ++   +RH    + +M+  L      + A+ +L  M
Sbjct: 17  QVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEELLCRM 76

Query: 168 ARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
                    + F  +  AY R  K  +A+ V   M++    P+     T   +LV  N+L
Sbjct: 77  KEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQL 136

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA-IKLIDEMPLKGCSPDKVSYYT 286
             ALRF   M+  GI P+V + N LIK  C      DA +++  EMP +GC PD  +Y T
Sbjct: 137 KLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGT 196

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LC+                        G+I EAKEL  +M    C P VVTYT+++
Sbjct: 197 LINGLCR-----------------------LGKIGEAKELFKEMETKACSPTVVTYTSLI 233

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C+  +LD A ++L++M   G KPN  +Y++ ++G C +G S  A E+++        
Sbjct: 234 HGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHL 293

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN ITYS ++HGL +EGKL EA +++  M  +G  P       +I   C   K   A  F
Sbjct: 294 PNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANF 353

Query: 467 MQECL-----------------------------------------NKGCAVNVVNFTSL 485
           + E +                                          +G +++   F SL
Sbjct: 354 LDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSL 413

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +  FC KGDL +A  L+D+M L    PD VT+  ++ A     +V E+ EL+
Sbjct: 414 VNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELV 465



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 178/380 (46%), Gaps = 23/380 (6%)

Query: 218 IHVLVVGNKLAKALRFLERM--QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
           I  LV  N    A   L RM  +   IT ++    C  + Y  +H+  DA+++  +M   
Sbjct: 57  ISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSIC--RAYGRVHKPLDAVRVFRKMKEY 114

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMVNDS---------NLFHDQGRIEE 322
            C P + SY TV   L  E ++K      R + E  +  S          L  + G ++ 
Sbjct: 115 ECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDA 174

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A  +  +M   GC PD  TY  ++NG CR+G++ +AK++ ++M    C P  V+YT+ ++
Sbjct: 175 ALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIH 234

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC +     A  ++     +   PN  TYS +M G  + G  S A +++  MV +   P
Sbjct: 235 GLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLP 294

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             +  + L+  LC+EGK+  A + +     +G   +   +  +I GFC      EA + L
Sbjct: 295 NMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFL 354

Query: 503 DDMYLCKKDPDTVTYT--TIIDALSKNGRVEE----ATELMMKMLSKGLVPTVVTYRTVI 556
           D+M L    P+ +T++    I  +   G   E    A +L + M ++G+     T+ +++
Sbjct: 355 DEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLV 414

Query: 557 HRYCQVGRVEDLLKLLEKML 576
           + +C  G +     L+++M+
Sbjct: 415 NYFCNKGDLHKAAHLVDEMV 434



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 171/368 (46%), Gaps = 37/368 (10%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSK-TKLCQGAKRVLRLMAR 169
           + A+L  +   ++AL+F+ +  R+           ++++ L K +     A R+ R M  
Sbjct: 126 VFAILVGENQLKLALRFYRYM-REMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPN 184

Query: 170 RGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           RG  C P++++Y  L+    R GK+  A  +   M+  A +P ++   + IH L     L
Sbjct: 185 RG--CPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDL 242

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
             A+R LE M   GI PNV TY+ L+ G+C       A++L+D M  +   P+ ++Y T+
Sbjct: 243 DSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTL 302

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +  LCKE                       G+++EA E++++M   G  PD   Y  +++
Sbjct: 303 VHGLCKE-----------------------GKLQEAVEILDRMKLQGLRPDAGLYGKIIS 339

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYT-------AFLNGLCHNGKSLEAREMINTS 400
           GFC + +  +A   L +M   G  PN ++++         + GLC    +  A ++  + 
Sbjct: 340 GFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPN-RAFQLYLSM 398

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
                + +A T+  +++    +G L +A  +V EMV  G  P  V  N ++ +     K+
Sbjct: 399 RTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKV 458

Query: 461 DGAKKFMQ 468
             + + +Q
Sbjct: 459 RESAELVQ 466



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 137/281 (48%), Gaps = 3/281 (1%)

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           T++ +++          A+++L +M    C      + +         K L+A  +    
Sbjct: 52  TFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKM 111

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR-EGK 459
           +E    P+  +Y  V   L  E +L  A    R M + G  P+   +N+LI++LC+  G 
Sbjct: 112 KEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGT 171

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           MD A +  +E  N+GC  +   + +LI G C+ G + EA  L  +M      P  VTYT+
Sbjct: 172 MDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTS 231

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +I  L ++  ++ A  L+ +M SKG+ P V TY +++  +C+ G     L+LL+ M+S++
Sbjct: 232 LIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRR 291

Query: 580 KCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
                  Y+ ++  LC  G L+EA +IL ++     + DA 
Sbjct: 292 HLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAG 332



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 3/174 (1%)

Query: 512 PDTVTYTTIIDALSKN-GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
           P   +   +I AL KN G ++ A  +  +M ++G  P   TY T+I+  C++G++ +  +
Sbjct: 153 PSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKE 212

Query: 571 LLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           L ++M +K    T   Y  +I  LC    L+ A ++L ++     K +  T   L++ + 
Sbjct: 213 LFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHC 272

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             G    A ++   M +R  +P++     +   L  EGK +EA  ++ R   +G
Sbjct: 273 KSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQG 326


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 222/472 (47%), Gaps = 33/472 (6%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI         L+ ++    ++  A  VL+ + K    P+     T I  + V  K
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGK 146

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +AL   ++M   G  P+V+TY  LI G C +     AI+L+  M  K C P+  +Y T
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQGRIEEAKE---LVNQMSQMG 334
           ++  LCK++++ E  +L  +MV           ++L H    + E K    L+N+M    
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            +PDVV++  VV+  C+ G++ +A  ++ +M   G +PN V+YTA ++G C   +  EA 
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326

Query: 395 EMINTSEEEWWTPNAITYSVVMHG---LRREGK----------------LSEACDVVREM 435
           ++ +T   +   PN I+Y+ +++G   ++R  K                + EA  V   M
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTM 386

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           V KG  P  +  N LI   C+  ++D A     E   +    + V +++LI G C    L
Sbjct: 387 VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 446

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           ++A++L  +M  C + P+ VTY  ++D L KN  + EA  L+  +    L P +      
Sbjct: 447 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA 506

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
           I   C+ G +E    L   + SK  Q     Y+ +I  LC  G L+EA K+ 
Sbjct: 507 IDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLF 558



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 240/511 (46%), Gaps = 43/511 (8%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  + + G +     F+ L+      GK+  A+++   M      P+++   T I+
Sbjct: 115 AFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLIN 174

Query: 220 VLV-VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
            L  VGN  A A+R L  M      PNV  YN +I   C   ++ +A  L  EM  KG S
Sbjct: 175 GLCKVGNTSA-AIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS 233

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKE 325
           PD  +Y +++  LC     K V  L+ +MV DS +  D             +G++ EA +
Sbjct: 234 PDIFTYNSLIHALCNLCEWKHVATLLNEMV-DSKIMPDVVSFNTVVDALCKEGKVTEAHD 292

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           +V++M Q G  P+VVTYTA+++G C + E+D+A K+   M   GC PN +SY   +NG C
Sbjct: 293 VVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYC 352

Query: 386 ---------HNGKSL----------EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                    H    +          EA ++ +T   +   PN I+Y+ +++G  +  ++ 
Sbjct: 353 KIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 412

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A  +  EM ++   P  V  + LI  LC   ++  A     E +      N+V +  L+
Sbjct: 413 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 472

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
              C+   L EA++LL  +     DPD       ID + + G +E A +L   + SKGL 
Sbjct: 473 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 532

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYL-----EEA 601
           P V TY  +I+  C+ G +++  KL  +M  +  C    N  I N  + G+L       A
Sbjct: 533 PDVWTYSIMINGLCRRGLLDEASKLFREM-DENGC--TLNGCIYNTITRGFLRNNETSRA 589

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGI 632
            ++L +++     ADAST  + V+   + G+
Sbjct: 590 IQLLQEMVARGFSADASTMTLFVKMLSDDGL 620



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 240/526 (45%), Gaps = 46/526 (8%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ + ++       + +   M    + PN+   +  I+     N++  A   L ++ 
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+  T+  LI+G C   +I +A+ L D+M  +G  PD V+Y T++  LCK     
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK----- 178

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                              G    A  L+  M Q  C P+V  Y  +++  C+  ++ +A
Sbjct: 179 ------------------VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +  +M   G  P+  +Y + ++ LC+  +      ++N   +    P+ ++++ V+  
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDA 280

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L +EGK++EA DVV +M+++G  P  V    L+   C   +MD A K     + KGC  N
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPN 340

Query: 479 VVNFTSLIRGFC--QKGD-----------------LEEALSLLDDMYLCKK-DPDTVTYT 518
           V+++ +LI G+C  Q+ D                 ++EA+ + D M +CK   P+ ++Y 
Sbjct: 341 VISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTM-VCKGCMPNVISYN 399

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML-- 576
           T+I+   K  R+++A  L  +M  + L+P  VTY T+IH  C V R++D + L  +M+  
Sbjct: 400 TLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVAC 459

Query: 577 SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
           S+      Y  +++ LC   YL EA  +L  +  +    D    ++ ++     G    A
Sbjct: 460 SQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAA 519

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             +   + ++ L PD+     +   L   G  +EA  L     E G
Sbjct: 520 RDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 565



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 230/503 (45%), Gaps = 74/503 (14%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           +R D + Y  ++  L K      A R+L  M ++   C+P  F+Y  ++ +  +  ++  
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK--NCQPNVFAYNTIIDSLCKDRQVTE 219

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVL------------------------VVG------ 224
           A  + S M    ++P++   N+ IH L                        VV       
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279

Query: 225 -----NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                 K+ +A   +++M   G+ PNV+TY  L+ G+C L  + +A+K+ D M  KGC P
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP 339

Query: 280 DKVSYYTVMGYLCKEKRIKEV---RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI 336
           + +SY T++   CK +RI +      LM+      N+       +EA ++ + M   GC+
Sbjct: 340 NVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNM-------DEAVKVFDTMVCKGCM 392

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA--- 393
           P+V++Y  ++NG+C++  +D+A  +  +M      P+TV+Y+  ++GLCH  +  +A   
Sbjct: 393 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 452

Query: 394 -REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
             EM+  S+     PN +TY +++  L +   L+EA  +++ +      P     N+ I 
Sbjct: 453 FHEMVACSQ----IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 508

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            +CR G+++ A+       +KG   +V  ++ +I G C++G L+EA  L  +M       
Sbjct: 509 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTL 568

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           +   Y TI     +N     A +L+ +M+++G      T                 + L 
Sbjct: 569 NGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST-----------------MTLF 611

Query: 573 EKMLSKQKCRTAYNQVIENLCSF 595
            KMLS      +  Q++ N C +
Sbjct: 612 VKMLSDDGLDQSLKQILRNGCKW 634



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 105/467 (22%), Positives = 206/467 (44%), Gaps = 59/467 (12%)

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           N +  A+    RM      P+ + +N L+     +      + L  +M   G  P+  + 
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
           + ++   C   R+     ++ K++                       ++G  PD  T+T 
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKIL-----------------------KLGHQPDTATFTT 136

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++ G C  G++ +A  +  +M   G +P+ V+Y   +NGLC  G +  A  ++ +  ++ 
Sbjct: 137 LIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN 196

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             PN   Y+ ++  L ++ +++EA ++  EMV KG  P     N LI +LC   +     
Sbjct: 197 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 256

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             + E ++     +VV+F +++   C++G + EA  ++D M     +P+ VTYT ++D  
Sbjct: 257 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGH 316

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV------------------- 565
                ++EA ++   M+ KG +P V++Y T+I+ YC++ R+                   
Sbjct: 317 CLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNM 376

Query: 566 EDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           ++ +K+ + M+ K       +YN +I   C    +++A  + G++ R     D  T   L
Sbjct: 377 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 436

Query: 624 VESY-----LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
           +        L   I L    VAC       IP+L     V+ R++L+
Sbjct: 437 IHGLCHVERLQDAIALFHEMVACSQ-----IPNL-----VTYRILLD 473



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 150/331 (45%), Gaps = 41/331 (12%)

Query: 312 NLFHDQG----RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N FH +      I+ A    N+M +M   P  V +  ++    ++        +  QM  
Sbjct: 30  NRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDS 89

Query: 368 HGCKPN-----------------------------------TVSYTAFLNGLCHNGKSLE 392
            G  PN                                   T ++T  + G+C  GK  E
Sbjct: 90  FGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGE 149

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A  + +    E + P+ +TY  +++GL + G  S A  ++  MV+K   P     N +I 
Sbjct: 150 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIID 209

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           SLC++ ++  A     E + KG + ++  + SLI   C   + +   +LL++M   K  P
Sbjct: 210 SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP 269

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D V++ T++DAL K G+V EA +++ KM+ +G+ P VVTY  ++  +C +  +++ +K+ 
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329

Query: 573 EKMLSK--QKCRTAYNQVIENLCSFGYLEEA 601
           + M+ K       +YN +I   C    +++A
Sbjct: 330 DTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 252/538 (46%), Gaps = 52/538 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++  + +       K +L  M + GI      ++ L+  Y +AG ++ A+   
Sbjct: 398 DVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHF 457

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + +  +  N +I N  +        + +A  F + M    I+ N +++NC+I  YC  
Sbjct: 458 VDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHR 517

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
            +I +A  + D+M   G SP+  +Y  ++  LC+   + + +  M  +++     D   F
Sbjct: 518 GKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTF 577

Query: 315 H-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +         G ++EA ++  +M +  C+PD+ TYT +++GFCR G++  A  MLQ M  
Sbjct: 578 NALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLE 637

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEA---------------------------------- 393
            G  P+TV+YT  LNGL + G+   A                                  
Sbjct: 638 KGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVN 697

Query: 394 ---REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
              R M +  + E + PN+ +Y+++MHG  + G+ S++  + + MV+KG  P  V   LL
Sbjct: 698 TIKRMMSDMYQNEVY-PNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLL 756

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I  L   G +D A KF+++ + +G   + + F  LI  F +K  +  AL L + M     
Sbjct: 757 ILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHL 816

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P + T++ +I+ L +   ++++ E++ +ML  GL P    Y  +++  C+VG ++   +
Sbjct: 817 SPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFR 876

Query: 571 LLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           L E+M  +       A + +I  LC  G LEEA  +   ++R+      +T   L+ S
Sbjct: 877 LKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHS 934



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 267/584 (45%), Gaps = 66/584 (11%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           ++ I+++ + +   K  LC     VL  M R  I+     ++ ++    R  +   A  +
Sbjct: 192 YNTILHWYVKKGRFKAALC-----VLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLL 246

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           L  M+K  + P+    NT I+      K+  A      M    + P+V TY  +I GYC 
Sbjct: 247 LKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCR 306

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------VNDS- 311
             RI  A+ ++ EM + G  P +++Y  ++   CK   +    DLM  +      +N + 
Sbjct: 307 NRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTM 366

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                + F   G I +AK+++  M + G  PDVVTY+A++NG CR+ ++ + K++L +M 
Sbjct: 367 CTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQ 426

Query: 367 HHGCKPNTVSYTAFLNGLCHNG--------------KSLEAREMINT------------S 400
             G  PN V YT  +   C  G              + L A  +I+             +
Sbjct: 427 KSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMIT 486

Query: 401 EEEWW---------TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           E E +         + N+++++ ++      GK+ EA  V  +MV+ G  P       L+
Sbjct: 487 EAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLL 546

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
           + LC+ G +  AK+FM   L+   AV+   F +L+ G C+ G L+EAL + + M      
Sbjct: 547 RGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCL 606

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD  TYT ++    + G++  A  ++  ML KG+VP  V Y  +++     G+V+    +
Sbjct: 607 PDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYV 666

Query: 572 LEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
            ++++ K+       AYN ++      G +    +++  + +     ++++ ++L+  Y+
Sbjct: 667 FQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYV 726

Query: 629 NKGI---PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
            +G     L  YK    M  + + PD      V+ RL++ G SE
Sbjct: 727 KRGQFSKSLYLYKY---MVRKGIRPD-----NVTYRLLILGLSE 762



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 230/499 (46%), Gaps = 45/499 (9%)

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
           Y + G+ + A+ VL  M++ ++  ++   N  I  L    + A+A   L+RM+   +TP+
Sbjct: 199 YVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPD 258

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK------- 298
             TYN LI G+    +I  A  + + M  +   P   +Y T++   C+ +RI        
Sbjct: 259 ECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLS 318

Query: 299 --EVRDLMEKMVNDSNLFHDQGRIE---EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
             E+  +M   +  S L +   ++     A +L+  +   G   +    T +++GFC+VG
Sbjct: 319 EMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVG 378

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           E+ +AK++L+ M   G  P+ V+Y+A +NG+C   K  E +E+++  ++    PN + Y+
Sbjct: 379 EISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYT 438

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++    + G +  A     ++ ++G    PV  N L+++  REG +  A+ F Q     
Sbjct: 439 TLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRM 498

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
             + N V+F  +I  +C +G + EA S+ DDM      P+  TY  ++  L + G + +A
Sbjct: 499 NISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQA 558

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLC 593
            + M  +L    +P+ V  +T                              +N ++  +C
Sbjct: 559 KQFMFCLLD---IPSAVDEKT------------------------------FNALLLGIC 585

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
            +G L+EA  I  K+++     D  T  +L+  +  KG  L A  +   M  + ++PD  
Sbjct: 586 KYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTV 645

Query: 654 LCKKVSERLILEGKSEEAD 672
               +   LI EG+ + A 
Sbjct: 646 AYTCLLNGLINEGQVKAAS 664



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 128/559 (22%), Positives = 248/559 (44%), Gaps = 19/559 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + +V+ ++++   K +    A   +  M   G +  P A + ++ A    G+ +     L
Sbjct: 84  NHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFL 143

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
                     ++  CN  ++ L    +  KA   L++M+   ++ N  TYN ++  Y   
Sbjct: 144 RESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLS-NSATYNTILHWYVKK 202

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R K A+ ++++M       D  +Y  ++  LC+ KR      L+++M  D         
Sbjct: 203 GRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTY 262

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               N F  +G+I  A+ + N M +   +P V TYT +++G+CR   +D+A  +L +M  
Sbjct: 263 NTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEI 322

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+ ++Y+A LNG C       A +++   +    T N    ++++ G  + G++S+
Sbjct: 323 TGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISK 382

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +++ M++ G  P  V  + LI  +CR  KM   K+ +      G   N V +T+LI 
Sbjct: 383 AKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLIC 442

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            +C+ G ++ AL    D+Y      + V +  ++ A  + G + EA      M    +  
Sbjct: 443 YYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISF 502

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKML----SKQKCRTAYNQVIENLCSFGYLEEAGK 603
             V++  +I  YC  G++ +   + + M+    S   C   Y  ++  LC  G+L +A +
Sbjct: 503 NSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVC--TYQNLLRGLCQGGHLVQAKQ 560

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
            +  +L   S  D  T + L+      G    A  +  +M   N +PD+     +     
Sbjct: 561 FMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFC 620

Query: 664 LEGKSEEADTLMLRFVERG 682
            +GK   A  ++   +E+G
Sbjct: 621 RKGKILPALVMLQMMLEKG 639



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 130/546 (23%), Positives = 235/546 (43%), Gaps = 51/546 (9%)

Query: 117 SQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP 176
            ++D ++AL+       +        +Y M + IL + ++   A  VL+ +A  G  C  
Sbjct: 9   GKSDGKLALKILNSIVERSGLDRITYIYCMAVRILIQAQMHSQAMSVLKHLAVTGFSCTA 68

Query: 177 -----------------EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
                              F  L+ AY +  K+ +A   +  M       + + CN+ + 
Sbjct: 69  IFTSLLRIISRFDSTNHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILK 128

Query: 220 VLVVGNKLAKALRFLERMQLAGITP-NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
            LV   +      FL R  LA   P +V T N L+   C     + A  ++ +M    C 
Sbjct: 129 ALVEEGESKYVWLFL-RESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMK-SCCL 186

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPD 338
            +  +Y T++ +  K+ R K    ++E M  DS        I+                D
Sbjct: 187 SNSATYNTILHWYVKKGRFKAALCVLEDMERDS--------IQ---------------AD 223

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           + TY  +++  CR+    +A  +L++M      P+  +Y   +NG    GK   AR + N
Sbjct: 224 IYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFN 283

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
               +   P+  TY+ ++ G  R  ++ +A  V+ EM   G  P+ +  + L+   C+  
Sbjct: 284 HMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVS 343

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
            +  A   M +  ++G  +N    T LI GFCQ G++ +A  +L  M     DPD VTY+
Sbjct: 344 MLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYS 403

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            +I+ + +  ++ E  E++ +M   G++P  V Y T+I  YC+ G V+  LK    +  +
Sbjct: 404 ALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRR 463

Query: 579 QKCRTAYNQVIEN--LCSF---GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
                  N VI N  L +F   G + EA      + R     ++ + + +++SY ++G  
Sbjct: 464 G---LVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKI 520

Query: 634 LLAYKV 639
           + A+ V
Sbjct: 521 VEAFSV 526



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 189/437 (43%), Gaps = 59/437 (13%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLR-LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
            D + Y  +L  L      + A  V + ++ + G+     A++ LM  Y + G +     +
Sbjct: 643  DTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRM 702

Query: 199  LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
            +S M +  V PN    N  +H  V   + +K+L   + M   GI P+ +TY  LI G  +
Sbjct: 703  MSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSE 762

Query: 259  LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
               I  A+K +++M L+G  PDK+ +  ++                         F ++ 
Sbjct: 763  CGLIDIAVKFLEKMVLEGIFPDKLVFDILI-----------------------TSFSEKS 799

Query: 319  RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
            ++  A  L N M  +   P   T++A++NG  R   LDQ+ ++L +M   G +PN   Y 
Sbjct: 800  KMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYI 859

Query: 379  AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
            A +N  C                                   R G++  A  +  EM   
Sbjct: 860  ALVNAKC-----------------------------------RVGEIDRAFRLKEEMKAI 884

Query: 439  GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
            G  P  V  + +I+ LCR GK++ A       +  G    V  FT+L+   C++  + +A
Sbjct: 885  GIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADA 944

Query: 499  LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
            L L   M LC+   D V+Y  +I  L K+  + +A +L  +M SKGL P V TY T+   
Sbjct: 945  LHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGA 1004

Query: 559  YCQVGRVEDLLKLLEKM 575
                GR+++  +LLE +
Sbjct: 1005 MYSTGRMQNGEELLEDI 1021



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 217/478 (45%), Gaps = 33/478 (6%)

Query: 125 LQFFYWADRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECR---PEA- 178
           ++ F   D   RY H P V  Y  +L       LCQG   V    A++ + C    P A 
Sbjct: 521 VEAFSVYDDMVRYGHSPNVCTYQNLLR-----GLCQGGHLV---QAKQFMFCLLDIPSAV 572

Query: 179 ----FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
               F+ L++   + G L  A+ +   M K    P++      +       K+  AL  L
Sbjct: 573 DEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVML 632

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVM-GYLC 292
           + M   G+ P+ + Y CL+ G  +  ++K A  +  E+  K G   D ++Y ++M GYL 
Sbjct: 633 QMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYL- 691

Query: 293 KEKRIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMGCIPDVV 340
           K   +  ++ +M  M  +         + L H    +G+  ++  L   M + G  PD V
Sbjct: 692 KGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNV 751

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TY  ++ G    G +D A K L++M   G  P+ + +   +       K   A  + N  
Sbjct: 752 TYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCM 811

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           +    +P++ T+S +++GL R+  L ++ +V+ EM++ G  P       L+ + CR G++
Sbjct: 812 KCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEI 871

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D A +  +E    G     V  +S+IRG C+ G LEEA+ +  +M      P   T+TT+
Sbjct: 872 DRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTL 931

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           + +L K  ++ +A  L   M    L   VV+Y  +I   C+   + D L L  +M SK
Sbjct: 932 MHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSK 989



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 10/170 (5%)

Query: 162  RVLRL---MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
            R  RL   M   GI     A S ++    R GKL  A+ V S M ++ + P +    T +
Sbjct: 873  RAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLM 932

Query: 219  HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
            H L   +K+A AL     M+L  +  +V++YN LI G C    I DA+ L  EM  KG  
Sbjct: 933  HSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLW 992

Query: 279  PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVN 328
            P+  +Y T+ G +    R++   +L+E +        ++G I   K+L N
Sbjct: 993  PNVTTYITLTGAMYSTGRMQNGEELLEDI-------EERGLIPAFKQLEN 1035


>gi|356512321|ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37230-like [Glycine max]
          Length = 733

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 159/656 (24%), Positives = 295/656 (44%), Gaps = 75/656 (11%)

Query: 75  HPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQ 134
           H L   +C+++  R AW+ +L+  +R+L+    P  +  VL   A    ALQF+ W +R 
Sbjct: 54  HNLELTICKMMSNR-AWTTRLQNSIRSLVPEFDPSLVYNVLHGAASPEHALQFYRWVERA 112

Query: 135 WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIE---CRPEAFSYLMVAYSRAGK 191
             + H P     +++IL +      A+ +L    R G+       +AF  L+ +Y RAG 
Sbjct: 113 GLFTHTPETTLKIVQILGRYSKLNHARCILFNDTRGGVSRAAVTEDAFVSLIDSYGRAGI 172

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           ++ ++ +   M++  +   +   +    V++   +   A R+   M L G+ P   T+N 
Sbjct: 173 VQESVKLFKKMKELGLDRTVKSYDALFKVILRRGRYMMAKRYYNAMLLEGVDPTRHTFNI 232

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVND 310
           L+ G     R+  A++  ++M  +G  PD V+Y T++ GY     R K            
Sbjct: 233 LLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYF----RFK------------ 276

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                   +++EA++L  +M     +P+V+++T ++ G+   G +D A K+ ++M   G 
Sbjct: 277 --------KVDEAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGRIDDALKVFEEMKGCGV 328

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP--NAITYSVVMHGLRREGKLSEA 428
           KPN V+++  L GLC   K  EAR+++    E +  P  NA+ +  +M    + G L  A
Sbjct: 329 KPNVVTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDNAL-FMKMMSCQCKAGDLDAA 387

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN------- 481
            DV++ MV+           +LI+S C+    D A+K + + + K   +   N       
Sbjct: 388 ADVLKAMVRLSIPTEAGHYGVLIESFCKANVYDKAEKLLDKLIEKEIVLRPQNDSEMEPS 447

Query: 482 -FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            +  +I   C+ G   +A +    + L K   D+V +  +I   SK G  + A E+M  M
Sbjct: 448 AYNLMIGYLCEHGRTGKAETFFRQL-LKKGVQDSVAFNNLIRGHSKEGNPDSAFEIMKIM 506

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYL 598
             +G+   V +YR +I  Y + G   D    L+ ML        + Y  V+E+L   G +
Sbjct: 507 GRRGVARDVDSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVMESLFDDGRV 566

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKG--------IPLL--------------- 635
           + A +++  ++   +K +      ++E+ L +G        I LL               
Sbjct: 567 QTASRVMKSMVEKGAKENMDLVLKILEALLLRGHVEEALGRIDLLMHNGCEPDFDHLLSV 626

Query: 636 ---------AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                    A K+   +  R+ I D  +  KV + L+  GK+  A +++ + +E+G
Sbjct: 627 LCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDALLAAGKTLNAYSILCKILEKG 682



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 130/528 (24%), Positives = 245/528 (46%), Gaps = 42/528 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           AKR    M   G++     F+ L+     + +L  A+     M+   + P+++  NT I+
Sbjct: 211 AKRYYNAMLLEGVDPTRHTFNILLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLIN 270

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                 K+ +A +    M+   I PNV+++  ++KGY    RI DA+K+ +EM   G  P
Sbjct: 271 GYFRFKKVDEAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGRIDDALKVFEEMKGCGVKP 330

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMV------NDSNLFH-------DQGRIEEAKEL 326
           + V++ T++  LC  +++ E RD++ +MV       D+ LF          G ++ A ++
Sbjct: 331 NVVTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDNALFMKMMSCQCKAGDLDAAADV 390

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           +  M ++    +   Y  ++  FC+    D+A+K+L ++                     
Sbjct: 391 LKAMVRLSIPTEAGHYGVLIESFCKANVYDKAEKLLDKLIE------------------- 431

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
             K +  R   N SE E   P+A  Y++++  L   G+  +A    R+++KKG     V 
Sbjct: 432 --KEIVLRPQ-NDSEME---PSA--YNLMIGYLCEHGRTGKAETFFRQLLKKG-VQDSVA 482

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            N LI+   +EG  D A + M+    +G A +V ++  LI  + +KG+  +A + LD M 
Sbjct: 483 FNNLIRGHSKEGNPDSAFEIMKIMGRRGVARDVDSYRLLIESYLRKGEPADAKTALDGML 542

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                P++  Y +++++L  +GRV+ A+ +M  M+ KG    +     ++      G VE
Sbjct: 543 ESGHLPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGAKENMDLVLKILEALLLRGHVE 602

Query: 567 DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           + L  ++ +L    C   ++ ++  LC       A K+L  VL      D S    ++++
Sbjct: 603 EALGRID-LLMHNGCEPDFDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDA 661

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            L  G  L AY + C++  +    D     ++ + L  EG +++AD L
Sbjct: 662 LLAAGKTLNAYSILCKILEKGGSTDWSSRDELIKSLNQEGNTKQADVL 709


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 234/486 (48%), Gaps = 14/486 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  RG+E     +S L+   +RA ++ +A +VL  M K    PN+++ N  I   +    
Sbjct: 310 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 369

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L KA+   + M   G++    TYN LIKGYC   +  +A +L+ EM   G + ++ S+ +
Sbjct: 370 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 429

Query: 287 VMGYLCK----EKRIKEVRD-LMEKMVNDSNLFHD-------QGRIEEAKELVNQMSQMG 334
           V+  LC     +  ++ V + L+  M     L           G+  +A EL  Q    G
Sbjct: 430 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 489

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            + D  T  A+++G C  G+LD+A ++ +++   GC  + VSY   ++G C   K  EA 
Sbjct: 490 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 549

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
             ++   +    P+  TYS+++ GL    K+ EA     +  + G  P     +++I   
Sbjct: 550 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 609

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+  + +  ++F  E ++K    N V +  LIR +C+ G L  AL L +DM      P++
Sbjct: 610 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 669

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            TYT++I  +S   RVEEA  L  +M  +GL P V  Y  +I  Y ++G++  +  LL +
Sbjct: 670 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 729

Query: 575 MLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M SK     +  Y  +I      G + EA ++L ++       D+ T    +  YL +G 
Sbjct: 730 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 789

Query: 633 PLLAYK 638
            L A+K
Sbjct: 790 VLEAFK 795



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 210/434 (48%), Gaps = 25/434 (5%)

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           +G+      F+  + A+ + GK+  A+ + S M++A VAPN++  NT I  L +  +  +
Sbjct: 243 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 302

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A  F E+M   G+ P ++TY+ L+KG     RI DA  ++ EM  KG  P+ + Y  ++ 
Sbjct: 303 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI- 361

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
                               DS  F + G + +A E+ + M   G      TY  ++ G+
Sbjct: 362 --------------------DS--FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 399

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G+ D A+++L++M   G   N  S+T+ +  LC +     A   +        +P  
Sbjct: 400 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 459

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
              + ++ GL + GK S+A ++  + + KGF       N L+  LC  GK+D A +  +E
Sbjct: 460 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 519

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            L +GC ++ V++ +LI G C K  L+EA   LD+M      PD  TY+ +I  L    +
Sbjct: 520 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 579

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
           VEEA +        G++P V TY  +I   C+  R E+  +  ++M+SK  Q     YN 
Sbjct: 580 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 639

Query: 588 VIENLCSFGYLEEA 601
           +I   C  G L  A
Sbjct: 640 LIRAYCRSGRLSMA 653



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 134/538 (24%), Positives = 239/538 (44%), Gaps = 39/538 (7%)

Query: 98  ELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
           +L  +L  L+  ++    RS+ + + AL FF  A   + +      Y +++ +L    L 
Sbjct: 72  QLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLL 131

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV---APNLLIC 214
             A+ VL  +    +   P       VA      + +AM  LS+     +     +LLI 
Sbjct: 132 SAARVVLIRLINGNVPVLPCGLRDSRVA------IADAMASLSLCFDEEIRRKMSDLLIE 185

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
                    G  LA  L     +   G+ P+  T N L+      +  +   +  D +  
Sbjct: 186 VYCTQFKRDGCYLA--LDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVC 242

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
           KG SPD   + T +   CK                        G++EEA +L ++M + G
Sbjct: 243 KGVSPDVYLFTTAINAFCK-----------------------GGKVEEAVKLFSKMEEAG 279

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P+VVT+  V++G    G  D+A    ++M   G +P  ++Y+  + GL    +  +A 
Sbjct: 280 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 339

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            ++    ++ + PN I Y+ ++      G L++A ++   MV KG   T    N LI+  
Sbjct: 340 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 399

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G+ D A++ ++E L+ G  VN  +FTS+I   C     + AL  + +M L    P  
Sbjct: 400 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 459

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
              TT+I  L K+G+  +A EL  + L+KG V    T   ++H  C+ G++++  ++ ++
Sbjct: 460 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 519

Query: 575 MLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
           +L +  C   R +YN +I   C    L+EA   L ++++   K D  T  +L+    N
Sbjct: 520 ILGRG-CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 576



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 128/299 (42%), Gaps = 48/299 (16%)

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC-----LNKGCAVNVVNF 482
           A DV   +  KG FP+    N+L+ SL R      A +F + C     + KG + +V  F
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVR------ANEFQKCCEAFDVVCKGVSPDVYLF 252

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           T+ I  FC+ G +EEA+ L   M      P+ VT+ T+ID L   GR +EA     KM+ 
Sbjct: 253 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 312

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
           +G+ PT++TY  ++    +  R+ D   +L++M  K        YN +I++    G L +
Sbjct: 313 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 372

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKG---------------------------IP 633
           A +I   ++       +ST + L++ Y   G                           I 
Sbjct: 373 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 432

Query: 634 LL--------AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           LL        A +    M  RN+ P   L   +   L   GK  +A  L  +F+ +G +
Sbjct: 433 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 491



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 33/264 (12%)

Query: 104 RSLKPRQ------ICAVLRSQADERVALQFFYWAD-RQWRYRHDPIVYYMMLEILSKTKL 156
           R LKP        IC +      E  A+QF  W D ++     D   Y +M++   K + 
Sbjct: 558 RGLKPDNYTYSILICGLFNMNKVEE-AIQF--WDDCKRNGMLPDVYTYSVMIDGCCKAER 614

Query: 157 CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
            +  +     M  + ++     +++L+ AY R+G+L  A+ +   M+   ++PN     +
Sbjct: 615 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 674

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            I  + + +++ +A    E M++ G+ PNV  Y  LI GY  L ++     L+ EM  K 
Sbjct: 675 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 734

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI 336
             P+K++Y  ++G   ++                       G + EA  L+N+M + G +
Sbjct: 735 VHPNKITYTVMIGGYARD-----------------------GNVTEASRLLNEMREKGIV 771

Query: 337 PDVVTYTAVVNGFCRVGELDQAKK 360
           PD +TY   + G+ + G + +A K
Sbjct: 772 PDSITYKEFIYGYLKQGGVLEAFK 795


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/505 (28%), Positives = 236/505 (46%), Gaps = 24/505 (4%)

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            VAP++  CN  + VL    +          M    I P ++TYN L+  +    R  +A
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 266 IKLIDEMPLKG--CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--VNDSNLFH------ 315
             L+ EM  +G  C  + V+Y  V+ +L +E  ++    L++ M     ++ F       
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLIT 322

Query: 316 ---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
              ++G +++ + L  +M   G +P +VTY A+++G  +  +++ A+    +M   G  P
Sbjct: 323 ALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLP 382

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           + ++Y + LNG C  G   EA  ++         P  +TY+ ++ G  R G L EA  + 
Sbjct: 383 DLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLK 442

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            EMV++G FP      +L+    +   +  A++F  E L+KG   +   + + I      
Sbjct: 443 EEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELIL 502

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           GD  +A  L + M L    PDTVTY  IID L K G +++A +L MKM+S GL P  +TY
Sbjct: 503 GDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITY 562

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
             +IH +C+ G + +  KLL  M+S   Q     Y  +I   C  G L  A     K+L 
Sbjct: 563 TCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLD 622

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
              + +  T +VL+ +    G  LLAY     M  R L P+     K +  L+++G   E
Sbjct: 623 VGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPN-----KYTYTLLIDGNCRE 677

Query: 671 ---ADTLMLRF-VERGHIQPKSEEH 691
              AD + L F + +  I P    H
Sbjct: 678 GNWADAIRLYFEMHQNGIPPDYCTH 702



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 175/348 (50%), Gaps = 13/348 (3%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+   + P+L+  N+ ++       L +AL  L  ++ AG+ P VLTYN LI GYC L  
Sbjct: 375 MRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGG 434

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNLFHDQG 318
           +++A +L +EM  +GC PD  +Y  +M    K + +   R+  ++M++     + F    
Sbjct: 435 LEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNT 494

Query: 319 RI---------EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           RI          +A +L   M   G  PD VTY  +++G C+ G L  AK +  +M   G
Sbjct: 495 RICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDG 554

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            +P+ ++YT  ++  C  G   EAR+++N    +   P+ +TY++++H   R G L  A 
Sbjct: 555 LQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAY 614

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
              R+M+  G  P  +  N+LI +LCR G+   A     E L +G A N   +T LI G 
Sbjct: 615 GWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGN 674

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           C++G+  +A+ L  +M+     PD  T+  +     K G +  A E +
Sbjct: 675 CREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDK-GHMYHAIEYL 721



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 211/437 (48%), Gaps = 30/437 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y +++  L++    + A +++  M    +  +  +F+Y  L+ A    G ++    + 
Sbjct: 281 VTYNVVISFLAREGHLENAAKLVDSMR---LSKKASSFTYNPLITALLERGFVQKVEALQ 337

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKL-AKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
             M+   + P L+  N  IH L+   ++ A  L+F E M+  G+ P+++TYN ++ GYC 
Sbjct: 338 MEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAE-MRAMGLLPDLITYNSMLNGYCK 396

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
              +K+A+ L+ ++   G +P  ++Y T++   C+                        G
Sbjct: 397 AGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCR-----------------------LG 433

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
            +EEA+ L  +M + GC PDV TYT ++NG  +V  L  A++   +M   G +P+  +Y 
Sbjct: 434 GLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYN 493

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             +      G + +A ++      +   P+ +TY+V++ GL + G L +A D+  +MV  
Sbjct: 494 TRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSD 553

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  +    LI + C  G +  A+K +   ++ G   +VV +T LI   C++G+L  A
Sbjct: 554 GLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSA 613

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
                 M     +P+ +TY  +I AL + GR   A     +ML +GL P   TY  +I  
Sbjct: 614 YGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDG 673

Query: 559 YCQVGRVEDLLKLLEKM 575
            C+ G   D ++L  +M
Sbjct: 674 NCREGNWADAIRLYFEM 690



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/299 (21%), Positives = 119/299 (39%), Gaps = 28/299 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y +++    K +    A+     M  +G++  P+ F+Y   + A    G    A  
Sbjct: 453 DVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQ--PDCFAYNTRICAELILGDTHKAFQ 510

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +  +M    + P+ +  N  I  L     L  A     +M   G+ P+ +TY CLI  +C
Sbjct: 511 LREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHC 570

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
           +   + +A KL++ M   G  P  V+Y  ++   C+                       +
Sbjct: 571 ERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCR-----------------------R 607

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G +  A     +M  +G  P+ +TY  +++  CR G    A     +M   G  PN  +Y
Sbjct: 608 GNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTY 667

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           T  ++G C  G   +A  +     +    P+  T++ +  G  + G +  A + +  +V
Sbjct: 668 TLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDK-GHMYHAIEYLENIV 725


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 234/486 (48%), Gaps = 14/486 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  RG+E     +S L+   +RA ++ +A +VL  M K    PN+++ N  I   +    
Sbjct: 334 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L KA+   + M   G++    TYN LIKGYC   +  +A +L+ EM   G + ++ S+ +
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453

Query: 287 VMGYLCK----EKRIKEVRD-LMEKMVNDSNLFHD-------QGRIEEAKELVNQMSQMG 334
           V+  LC     +  ++ V + L+  M     L           G+  +A EL  Q    G
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            + D  T  A+++G C  G+LD+A ++ +++   GC  + VSY   ++G C   K  EA 
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
             ++   +    P+  TYS+++ GL    K+ EA     +  + G  P     +++I   
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+  + +  ++F  E ++K    N V +  LIR +C+ G L  AL L +DM      P++
Sbjct: 634 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 693

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            TYT++I  +S   RVEEA  L  +M  +GL P V  Y  +I  Y ++G++  +  LL +
Sbjct: 694 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 753

Query: 575 MLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M SK     +  Y  +I      G + EA ++L ++       D+ T    +  YL +G 
Sbjct: 754 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 813

Query: 633 PLLAYK 638
            L A+K
Sbjct: 814 VLEAFK 819



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 210/434 (48%), Gaps = 25/434 (5%)

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           +G+      F+  + A+ + GK+  A+ + S M++A VAPN++  NT I  L +  +  +
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A  F E+M   G+ P ++TY+ L+KG     RI DA  ++ EM  KG  P+ + Y  ++ 
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI- 385

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
                               DS  F + G + +A E+ + M   G      TY  ++ G+
Sbjct: 386 --------------------DS--FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 423

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G+ D A+++L++M   G   N  S+T+ +  LC +     A   +        +P  
Sbjct: 424 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 483

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
              + ++ GL + GK S+A ++  + + KGF       N L+  LC  GK+D A +  +E
Sbjct: 484 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 543

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            L +GC ++ V++ +LI G C K  L+EA   LD+M      PD  TY+ +I  L    +
Sbjct: 544 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 603

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
           VEEA +        G++P V TY  +I   C+  R E+  +  ++M+SK  Q     YN 
Sbjct: 604 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 663

Query: 588 VIENLCSFGYLEEA 601
           +I   C  G L  A
Sbjct: 664 LIRAYCRSGRLSMA 677



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 134/538 (24%), Positives = 239/538 (44%), Gaps = 39/538 (7%)

Query: 98  ELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
           +L  +L  L+  ++    RS+ + + AL FF  A   + +      Y +++ +L    L 
Sbjct: 96  QLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLL 155

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV---APNLLIC 214
             A+ VL  +    +   P       VA      + +AM  LS+     +     +LLI 
Sbjct: 156 SAARVVLIRLINGNVPVLPCGLRDSRVA------IADAMASLSLCFDEEIRRKMSDLLIE 209

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
                    G  LA  L     +   G+ P+  T N L+      +  +   +  D +  
Sbjct: 210 VYCTQFKRDGCYLA--LDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVC 266

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
           KG SPD   + T +   CK                        G++EEA +L ++M + G
Sbjct: 267 KGVSPDVYLFTTAINAFCK-----------------------GGKVEEAVKLFSKMEEAG 303

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P+VVT+  V++G    G  D+A    ++M   G +P  ++Y+  + GL    +  +A 
Sbjct: 304 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 363

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            ++    ++ + PN I Y+ ++      G L++A ++   MV KG   T    N LI+  
Sbjct: 364 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 423

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G+ D A++ ++E L+ G  VN  +FTS+I   C     + AL  + +M L    P  
Sbjct: 424 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 483

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
              TT+I  L K+G+  +A EL  + L+KG V    T   ++H  C+ G++++  ++ ++
Sbjct: 484 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 543

Query: 575 MLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
           +L +  C   R +YN +I   C    L+EA   L ++++   K D  T  +L+    N
Sbjct: 544 ILGR-GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 600



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 128/299 (42%), Gaps = 48/299 (16%)

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC-----LNKGCAVNVVNF 482
           A DV   +  KG FP+    N+L+ SL R      A +F + C     + KG + +V  F
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVR------ANEFQKCCEAFDVVCKGVSPDVYLF 276

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           T+ I  FC+ G +EEA+ L   M      P+ VT+ T+ID L   GR +EA     KM+ 
Sbjct: 277 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 336

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
           +G+ PT++TY  ++    +  R+ D   +L++M  K        YN +I++    G L +
Sbjct: 337 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 396

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKG---------------------------IP 633
           A +I   ++       +ST + L++ Y   G                           I 
Sbjct: 397 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 456

Query: 634 LL--------AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           LL        A +    M  RN+ P   L   +   L   GK  +A  L  +F+ +G +
Sbjct: 457 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 515



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 33/264 (12%)

Query: 104 RSLKPRQ------ICAVLRSQADERVALQFFYWAD-RQWRYRHDPIVYYMMLEILSKTKL 156
           R LKP        IC +      E  A+QF  W D ++     D   Y +M++   K + 
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEE-AIQF--WDDCKRNGMLPDVYTYSVMIDGCCKAER 638

Query: 157 CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
            +  +     M  + ++     +++L+ AY R+G+L  A+ +   M+   ++PN     +
Sbjct: 639 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 698

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            I  + + +++ +A    E M++ G+ PNV  Y  LI GY  L ++     L+ EM  K 
Sbjct: 699 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 758

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI 336
             P+K++Y  ++G   ++                       G + EA  L+N+M + G +
Sbjct: 759 VHPNKITYTVMIGGYARD-----------------------GNVTEASRLLNEMREKGIV 795

Query: 337 PDVVTYTAVVNGFCRVGELDQAKK 360
           PD +TY   + G+ + G + +A K
Sbjct: 796 PDSITYKEFIYGYLKQGGVLEAFK 819


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 236/470 (50%), Gaps = 30/470 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A RV  LM  RG  C   AF+Y  L+     AG +R AM V   M+  + AP+  +  T 
Sbjct: 126 ACRVFVLMPLRG--CLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATM 183

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +H L    +  +A   LE     G  PN++ YN LI GYC+   ++ A+K+ + M    C
Sbjct: 184 VHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRC 243

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNLFH---------DQGRIEEAKE 325
           SP+  +Y  ++  LCK  +++    L  +MV    + N+           ++G ++ A  
Sbjct: 244 SPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFR 303

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L++ M   G +P+  T++ +++  C+  ++++A+  L  +   G K N V YT+ ++GLC
Sbjct: 304 LLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLC 363

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             GK   A E++     E + P+A +YS ++ GL R+ KLS+A  ++ +M++KG   +PV
Sbjct: 364 KTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPV 423

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
              ++I  L RE   +G KK   + +  G   ++V +T  +R +C++G +E+A S++  M
Sbjct: 424 TYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQM 483

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY----RTVIHRYC- 560
                 P+ VTY T+I   +  G V +A      M+ KG  P   +Y    R V+ +   
Sbjct: 484 VDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSS 543

Query: 561 -------QVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEA 601
                  ++  ++DL  LLE +  +Q    A  Y+  I  LC    LEEA
Sbjct: 544 DNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEA 593



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 215/437 (49%), Gaps = 14/437 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ L+ AY  AG +  A   L+ +  A +AP+     + +        L  A R    M 
Sbjct: 75  YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP 134

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
           L G      TY  L+ G      +++A+ +   M    C+PD   Y T++  LC+  R +
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTE 194

Query: 299 EVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           E   L+E+ +++             + + + G +E A ++   M    C P+V TYT ++
Sbjct: 195 EAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELI 254

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C+ G++++A  +  +M   G +PN V+YTA + G C+ G    A  +++  E     
Sbjct: 255 HGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLV 314

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN  T+SV++  L +  K+ EA   +  +VKKG     V    LI  LC+ GK+D A + 
Sbjct: 315 PNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADEL 374

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           MQ+ +++G   +  +++SLI G C++  L +A  +L+DM         VTYT IID L +
Sbjct: 375 MQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVR 434

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTA 584
               E   ++  KM++ G+ P +VTY   +  YC+ GR+ED   ++ +M+ +        
Sbjct: 435 EVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVT 494

Query: 585 YNQVIENLCSFGYLEEA 601
           YN +I    + G + +A
Sbjct: 495 YNTLIRGYANLGLVSQA 511



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 131/502 (26%), Positives = 237/502 (47%), Gaps = 15/502 (2%)

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
           A NL    T I+   +   +  A + L  +  AG+ P+   Y   + GYC    +  A +
Sbjct: 69  ARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACR 128

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------NLFH--- 315
           +   MPL+GC     +Y  ++  L     ++E   +   M  DS          + H   
Sbjct: 129 VFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLC 188

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
           + GR EEA+ L+ +    G  P++V Y A+++G+C  GE++ A K+ + M  + C PN  
Sbjct: 189 EAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVR 248

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +YT  ++GLC +GK   A  + +   E    PN +TY+ ++ G   EG L  A  ++  M
Sbjct: 249 TYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLM 308

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              G  P     ++LI +LC+  K++ A+ F+   + KG  VN V +TSLI G C+ G +
Sbjct: 309 ETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKI 368

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           + A  L+  M      PD  +Y+++ID L +  ++ +AT ++  M+ KG+  + VTY  +
Sbjct: 369 DAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTII 428

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I    +    E   K+ +KM++         Y   + + C  G +E+A  ++ +++    
Sbjct: 429 IDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             +  T + L+  Y N G+   A+     M  +   P+ +    V  RL+++  S +   
Sbjct: 489 FPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPN-EDSYTVLLRLVVKKSSSDNSV 547

Query: 674 LMLRFVERGHIQPKSEEHLQRQ 695
            + +  +   +Q   E+  +RQ
Sbjct: 548 DIWKIADMKDLQVLLEDITERQ 569



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 186/411 (45%), Gaps = 59/411 (14%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G E     ++ L+  Y  AG++ +A+ V   M     +PN+      IH L    K+ +A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           +    RM  AG+ PNV+TY  LI+G C+   ++ A +L+  M   G  P+  ++  ++  
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 291 LCKEKRIKEVR----DLMEKMVNDSNLFHDQ--------GRIEEAKELVNQMSQMGCIPD 338
           LCK ++++E +     L++K V  + + +          G+I+ A EL+ +M   G +PD
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
             +Y+++++G CR  +L QA  ML+ M   G + + V+YT  ++ L     S   +++ +
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                   P+ +TY+V +     EG++ +A  ++ +MV +G FP  V  N LI+     G
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG---------------DL-------- 495
            +  A    +  + KG   N  ++T L+R   +K                DL        
Sbjct: 507 LVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDIT 566

Query: 496 EEALSLLDDMY------LCKKD------------------PDTVTYTTIID 522
           E  L L  D+Y      LC+ D                  P    YT+IID
Sbjct: 567 ERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 127/287 (44%), Gaps = 36/287 (12%)

Query: 126 QFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA 185
           Q F  +  +   + + +VY  +++ L KT     A  +++ M   G      ++S L+  
Sbjct: 337 QLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV--VGNKLAKALRFLERMQLAGIT 243
             R  KL  A  +L  M +  +  + +     I  LV  VG++  K  +  ++M   GI 
Sbjct: 397 LCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPK--KIFDKMIATGIN 454

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY------YTVMGYLCKEKRI 297
           P+++TY   ++ YC+  R++DA  +I +M  +G  P+ V+Y      Y  +G + +    
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFST 514

Query: 298 KEV-----------------RDLMEKMVNDSNLFHDQGRIEEAKELVNQMS-----QMGC 335
            EV                 R +++K  +D+++  D  +I + K+L   +      Q+  
Sbjct: 515 FEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV--DIWKIADMKDLQVLLEDITERQLPL 572

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
             D+  Y+  +   CRV  L++AK     M +    P+   YT+ ++
Sbjct: 573 AADI--YSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 8/239 (3%)

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +N L+ +L R          M+   ++  A N+  +T+LI  +C  GD+  A   L  + 
Sbjct: 44  LNTLLMALARHRMFPD----MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLL 99

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                PD+  YT+ +    + G +  A  + + M  +G + T  TY  ++H     G V 
Sbjct: 100 HAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVR 159

Query: 567 DLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           + + +   M     C      Y  ++  LC  G  EEA  +L + +    + +    + L
Sbjct: 160 EAMTVFVGM-RADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNAL 218

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++ Y N G    A KV   M      P+++   ++   L   GK E A  L  R VE G
Sbjct: 219 IDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 197/394 (50%), Gaps = 20/394 (5%)

Query: 228 AKALRFLERMQLAG---ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           A A+    RM  AG   +TPN+ TY  LI   C   R+      +  +  KG   D +++
Sbjct: 70  AAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAF 129

Query: 285 YTVMGYLCKEKRIKEVRDL----MEKMVNDSNLFH---------DQGRIEEAKELVNQMS 331
             ++  LC +KR  +  D+    M ++    N+F          D+ R +EA EL+  M 
Sbjct: 130 TPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMP 189

Query: 332 QMG--CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
             G  C PDVV+YT V+NGF + G+LD+A     +M   G  PN V+Y++ +  LC    
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQA 249

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A E++ +  +    PN  TY+ ++HG    G+  EA   +++M   G  P  V  N 
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L+  LC+ G+   A+K       +G    +  + +L++G+  KG L E   LLD M    
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P+   ++ +I A +K G+V++A  +  KM  +GL P  VTY TVI   C+ GRVED +
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429

Query: 570 KLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEA 601
           +  E+M+ ++       YN +I +LC F   ++A
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 199/403 (49%), Gaps = 18/403 (4%)

Query: 167 MARRGI-ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           MAR G  E  P   +Y  L+ +   AG+L      L  + K     + +     +  L  
Sbjct: 79  MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138

Query: 224 GNKLAKALRF-LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG--CSPD 280
             + + A+   L RM   G  PNV +YN L+KG CD +R ++A++L+  MP  G  C PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 281 KVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSNLFHDQGR---IEEAKELVN 328
            VSY TV+    KE  + +          R ++  +V  S++     +   +++A E++ 
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            M + G +P+  TY ++V+G+C  G+  +A   L++M+  G +P+ V+Y + ++ LC NG
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EAR+M ++  +    P   TY  ++ G   +G L E   ++  MV+ G  P     +
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           +LI +  ++GK+D A     +   +G   + V + ++I   C+ G +E+A+   + M   
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           +  P  + Y ++I +L    + ++A +  +K   +  V T+ +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKDYFLKCWIEAFVWTLFS 481



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 40/367 (10%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM-LQQMYHHGCKPNTVS 376
           GR++     +  + + G   D + +T ++ G C       A  + L++M   GC PN  S
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFS 164

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWW--TPNAITYSVVMHGLRREGKLSEACDVVRE 434
           Y   L GLC   +S EA E++    ++     P+ ++Y+ V++G  +EG L +A     E
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M+ +G  P  V  + +I +LC+   MD A + +   +  G   N   + S++ G+C  G 
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
            +EA+  L  M+    +PD VTY +++D L KNGR  EA ++   M  +GL P + TY T
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           ++  Y   G + ++  LL+ M                                 +R    
Sbjct: 345 LLQGYATKGALVEMHGLLDLM---------------------------------VRNGIH 371

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            +     +L+ +Y  +G    A  V  +M  + L PD      V   L   G+ E+A   
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA--- 428

Query: 675 MLRFVER 681
            +R+ E+
Sbjct: 429 -MRYFEQ 434



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 139/265 (52%), Gaps = 5/265 (1%)

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN  +Y   +   C  G+       +    ++ +  +AI ++ ++ GL  + + S+A D+
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 432 V-REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG--CAVNVVNFTSLIRG 488
           V R M + G  P     N+L++ LC E +   A + +Q   + G  C  +VV++T++I G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           F ++GDL++A     +M      P+ VTY++II AL K   +++A E++  M+  G++P 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
             TY +++H YC  G+ ++ +  L+KM S   +     YN +++ LC  G   EA K+  
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 607 KVLRTASKADASTCHVLVESYLNKG 631
            + +   K + +T   L++ Y  KG
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKG 353



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 122/282 (43%), Gaps = 40/282 (14%)

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           TPN  TY +++      G+L      +  ++KKGF    +    L++ LC + +   A  
Sbjct: 88  TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147

Query: 466 FMQECLNK-GCAVNVVNFTSLIRGFCQKGDLEEALSLL----DDMYLCKKDPDTVTYTTI 520
            +   + + GC  NV ++  L++G C +   +EAL LL    DD   C   PD V+YTT+
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP--PDVVSYTTV 205

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           I+   K G +++A     +ML +G++P VVTY ++I                        
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSII------------------------ 241

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
                      LC    +++A ++L  +++     +  T + +V  Y + G P  A    
Sbjct: 242 ---------AALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +M +  + PD+     + + L   G+  EA  +     +RG
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/244 (20%), Positives = 100/244 (40%), Gaps = 23/244 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L K +    A  VL  M + G+      ++ ++  Y  +G+ + A+  L  
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    V P+++  N+ +  L    +  +A +  + M   G+ P + TY  L++GY     
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +   L+D M   G  P+   +  ++    K+ ++ +   +  K               
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK--------------- 399

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
                   M Q G  PD VTY  V+   C+ G ++ A +  +QM      P  + Y + +
Sbjct: 400 --------MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 382 NGLC 385
           + LC
Sbjct: 452 HSLC 455



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 80/167 (47%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K   C  A+++   M +RG++     +  L+  Y+  G L     +L
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M +  + PN  + +  I       K+ +A+    +M+  G+ P+ +TY  +I   C  
Sbjct: 363 DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKS 422

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
            R++DA++  ++M  +  SP  + Y +++  LC   +  + +D   K
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFLK 469


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 137/550 (24%), Positives = 250/550 (45%), Gaps = 46/550 (8%)

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +R A+  LS ++K++  P+   CN  IH L+  N    +L+FL  +   G TP+  ++N 
Sbjct: 2   VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---- 307
           ++   C L ++K A  ++  MP  GC PD +SY +++   C+   I+    ++E +    
Sbjct: 62  VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121

Query: 308 --------VNDSNLFHDQGRIEEAKELVNQMSQM--GCIPDVVTYTAVVNGFCRVGELDQ 357
                   V+ ++LF+   +++   E+   M  M   C P+VVTY+  ++ FC+ GEL  
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A K    M      PN V++T  ++G C  G    A  +         + N +TY+ ++ 
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  ++G++  A ++   MV+    P  +    +I    + G  D A KF+ + LN+G  +
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRL 301

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           ++  +  +I G C  G L+EA  +++DM      PD V +TT+++A  K+GR++ A  + 
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL-------------------------- 571
            K++ +G  P VV   T+I    + G++ + +                            
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIE 421

Query: 572 LEKMLSKQK------CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           +E++ SK         +  Y   I  LC  G L +A K+  ++++     D      L+ 
Sbjct: 422 VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIY 481

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ 685
              +KG+ + A +V   M N  + PD  +   +      EG    A  L+L    RG + 
Sbjct: 482 GLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVT 541

Query: 686 PKSEEHLQRQ 695
             S+    +Q
Sbjct: 542 AVSDADCSKQ 551



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 217/441 (49%), Gaps = 32/441 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLR-LMARRGIECRPE--AFSYLMVAYSRAGKLRNAM 196
           D I Y  +++   +    + A  VL  L A  G  C+P+  +F+ L   +S+   L    
Sbjct: 90  DVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF 149

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             + +M K   +PN++  +T I       +L  AL+    M+   ++PNV+T+ CLI GY
Sbjct: 150 VYMGVMLKCC-SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGY 208

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C    ++ A+ L  EM     S + V+Y  ++   CK+  ++   ++  +MV D      
Sbjct: 209 CKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED------ 262

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
             R+E               P+ + YT +++GF + G+ D A K L +M + G + +  +
Sbjct: 263 --RVE---------------PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITA 305

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   ++GLC NGK  EA E++   E+    P+ + ++ +M+   + G++  A ++  +++
Sbjct: 306 YGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLI 365

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           ++GF P  V ++ +I  + + G++  A  +   C+ K    N V +T LI   C++GD  
Sbjct: 366 ERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKA---NDVMYTVLIDALCKEGDFI 420

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           E   L   +      PD   YT+ I  L K G + +A +L  +M+ +GL+  ++ Y T+I
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480

Query: 557 HRYCQVGRVEDLLKLLEKMLS 577
           +     G + +  ++ ++ML+
Sbjct: 481 YGLASKGLMVEARQVFDEMLN 501



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/331 (21%), Positives = 154/331 (46%), Gaps = 12/331 (3%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            D  VA+   Y   R+ R   + + Y  +++   K    Q A+ +   M    +E     
Sbjct: 212 GDLEVAVSL-YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLV 270

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ ++  + + G   NAM  L+ M    +  ++      I  L    KL +A   +E M+
Sbjct: 271 YTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDME 330

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
            + + P+++ +  ++  Y    R+K A+ +  ++  +G  PD V+  T++  + K  ++ 
Sbjct: 331 KSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLH 390

Query: 299 E---------VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
           E           D+M  ++ D+     +G   E + L +++S+ G +PD   YT+ + G 
Sbjct: 391 EAIVYFCIEKANDVMYTVLIDA--LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGL 448

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G L  A K+  +M   G   + ++YT  + GL   G  +EAR++ +       +P++
Sbjct: 449 CKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDS 508

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
             + +++    +EG ++ A D++ +M ++G 
Sbjct: 509 AVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 234/486 (48%), Gaps = 14/486 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  RG+E     +S L+   +RA ++ +A +VL  M K    PN+++ N  I   +    
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L KA+   + M   G++    TYN LIKGYC   +  +A +L+ EM   G + ++ S+ +
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440

Query: 287 VMGYLCK----EKRIKEVRD-LMEKMVNDSNLFHD-------QGRIEEAKELVNQMSQMG 334
           V+  LC     +  ++ V + L+  M     L           G+  +A EL  Q    G
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            + D  T  A+++G C  G+LD+A ++ +++   GC  + VSY   ++G C   K  EA 
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
             ++   +    P+  TYS+++ GL    K+ EA     +  + G  P     +++I   
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+  + +  ++F  E ++K    N V +  LIR +C+ G L  AL L +DM      P++
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            TYT++I  +S   RVEEA  L  +M  +GL P V  Y  +I  Y ++G++  +  LL +
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740

Query: 575 MLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M SK     +  Y  +I      G + EA ++L ++       D+ T    +  YL +G 
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 800

Query: 633 PLLAYK 638
            L A+K
Sbjct: 801 VLEAFK 806



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 210/434 (48%), Gaps = 25/434 (5%)

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           +G+      F+  + A+ + GK+  A+ + S M++A VAPN++  NT I  L +  +  +
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A  F E+M   G+ P ++TY+ L+KG     RI DA  ++ EM  KG  P+ + Y  ++ 
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI- 372

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
                               DS  F + G + +A E+ + M   G      TY  ++ G+
Sbjct: 373 --------------------DS--FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G+ D A+++L++M   G   N  S+T+ +  LC +     A   +        +P  
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
              + ++ GL + GK S+A ++  + + KGF       N L+  LC  GK+D A +  +E
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            L +GC ++ V++ +LI G C K  L+EA   LD+M      PD  TY+ +I  L    +
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
           VEEA +        G++P V TY  +I   C+  R E+  +  ++M+SK  Q     YN 
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650

Query: 588 VIENLCSFGYLEEA 601
           +I   C  G L  A
Sbjct: 651 LIRAYCRSGRLSMA 664



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 134/538 (24%), Positives = 239/538 (44%), Gaps = 39/538 (7%)

Query: 98  ELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
           +L  +L  L+  ++    RS+ + + AL FF  A   + +      Y +++ +L    L 
Sbjct: 83  QLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLL 142

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV---APNLLIC 214
             A+ VL  +    +   P       VA      + +AM  LS+     +     +LLI 
Sbjct: 143 SAARVVLIRLINGNVPVLPCGLRDSRVA------IADAMASLSLCFDEEIRRKMSDLLIE 196

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
                    G  LA  L     +   G+ P+  T N L+      +  +   +  D +  
Sbjct: 197 VYCTQFKRDGCYLA--LDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVC 253

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
           KG SPD   + T +   CK                        G++EEA +L ++M + G
Sbjct: 254 KGVSPDVYLFTTAINAFCK-----------------------GGKVEEAVKLFSKMEEAG 290

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P+VVT+  V++G    G  D+A    ++M   G +P  ++Y+  + GL    +  +A 
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 350

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            ++    ++ + PN I Y+ ++      G L++A ++   MV KG   T    N LI+  
Sbjct: 351 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G+ D A++ ++E L+ G  VN  +FTS+I   C     + AL  + +M L    P  
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
              TT+I  L K+G+  +A EL  + L+KG V    T   ++H  C+ G++++  ++ ++
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530

Query: 575 MLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
           +L +  C   R +YN +I   C    L+EA   L ++++   K D  T  +L+    N
Sbjct: 531 ILGR-GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 128/299 (42%), Gaps = 48/299 (16%)

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC-----LNKGCAVNVVNF 482
           A DV   +  KG FP+    N+L+ SL R      A +F + C     + KG + +V  F
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVR------ANEFQKCCEAFDVVCKGVSPDVYLF 263

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           T+ I  FC+ G +EEA+ L   M      P+ VT+ T+ID L   GR +EA     KM+ 
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 323

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
           +G+ PT++TY  ++    +  R+ D   +L++M  K        YN +I++    G L +
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKG---------------------------IP 633
           A +I   ++       +ST + L++ Y   G                           I 
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443

Query: 634 LL--------AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           LL        A +    M  RN+ P   L   +   L   GK  +A  L  +F+ +G +
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 33/264 (12%)

Query: 104 RSLKPRQ------ICAVLRSQADERVALQFFYWAD-RQWRYRHDPIVYYMMLEILSKTKL 156
           R LKP        IC +      E  A+QF  W D ++     D   Y +M++   K + 
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEE-AIQF--WDDCKRNGMLPDVYTYSVMIDGCCKAER 625

Query: 157 CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
            +  +     M  + ++     +++L+ AY R+G+L  A+ +   M+   ++PN     +
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            I  + + +++ +A    E M++ G+ PNV  Y  LI GY  L ++     L+ EM  K 
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI 336
             P+K++Y  ++G   ++                       G + EA  L+N+M + G +
Sbjct: 746 VHPNKITYTVMIGGYARD-----------------------GNVTEASRLLNEMREKGIV 782

Query: 337 PDVVTYTAVVNGFCRVGELDQAKK 360
           PD +TY   + G+ + G + +A K
Sbjct: 783 PDSITYKEFIYGYLKQGGVLEAFK 806


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 147/590 (24%), Positives = 248/590 (42%), Gaps = 41/590 (6%)

Query: 92  SPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEIL 151
           +P     L +LL +  P      L   A    A  +   A     +  DP    ++  + 
Sbjct: 32  TPTAASLLADLLSAPTPSASALTLLRDAPSLAAELYSLLAAPYHGF--DPASLALLFSLP 89

Query: 152 SKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNL 211
           S  +L   + R+L             A  Y +++ S +     A ++   +   A  P+ 
Sbjct: 90  SCHRLPPPSPRIL------------SALLYKILSRSPSSSADAARFLRDSLAAGAPPPDT 137

Query: 212 LICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
              NT +  L     L    +    M+ A + PNV+TY  L+KG C   R+ DA+ ++D 
Sbjct: 138 SAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDG 197

Query: 272 M--PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQ 329
           M  P     PD V    ++  LCK  R+++    +E+ +                     
Sbjct: 198 MSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMR-------------------- 237

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
            S  GC P+ VTY  + + FCR G +  A +++ +M      PN V+    + GLC  G+
Sbjct: 238 -SVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGR 296

Query: 390 SLEAREMINTSEEEWWTP--NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
              A E        W     NA+TYS ++        +  A ++  EMV +G  P  +  
Sbjct: 297 VGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMY 356

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             +I  L + G++D A          G  ++   +  LI GFC++  L EA  LL +M  
Sbjct: 357 FTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKE 416

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD  TY T++  L K G      EL+ KM+  G  P+VVT+ T+IH YC+VG++++
Sbjct: 417 AGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDE 476

Query: 568 LLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            L++   M     Q     YN +I+ LC       A ++  ++      A+ +T + L++
Sbjct: 477 ALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLK 536

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
              +K +P  A+++   M      PD      + E L + G+++     M
Sbjct: 537 GLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDRLKHFM 586



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 122/506 (24%), Positives = 221/506 (43%), Gaps = 27/506 (5%)

Query: 103 LRSLKPRQICAVL-----RSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
           L    PR + A+L     RS +    A +F   +        D   +  +L+ L++    
Sbjct: 94  LPPPSPRILSALLYKILSRSPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDL 153

Query: 158 QGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQ--KAAVAPNLLI 213
            G  ++   M  R    RP   +Y  L+    +AG++ +A+ VL  M   ++ V P++++
Sbjct: 154 PGMTQLFASM--RDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVM 211

Query: 214 CNTAIHVLVVGNKLAKALRFLE-RMQ-LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
            N  +  L    +L +A++F+E RM+ + G  PN +TYNCL   +C    +  A +L+ +
Sbjct: 212 LNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAK 271

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK-----------MVNDSNL---FHDQ 317
           M  +  +P+ V+  T++G LC   R+    +   +            V  S L   F   
Sbjct: 272 MEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHT 331

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
             +  A EL ++M   G  PD + Y  +++G  + G LD A  M   M   G + +  +Y
Sbjct: 332 NNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAY 391

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              + G C   +  EA E++   +E    P+  TY+ ++ GL + G      +++ +M+ 
Sbjct: 392 NILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMID 451

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G  P+ V    LI   C+ G++D A +  +     G   N V + +LI   C+  D   
Sbjct: 452 GGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSL 511

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A+ L D+M       +  T+  ++  L      E+A ELM  M      P  VT   ++ 
Sbjct: 512 AIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILME 571

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRT 583
               +G  + L   ++   + ++  T
Sbjct: 572 WLPVIGETDRLKHFMQHDTTPKRMTT 597



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 148/337 (43%), Gaps = 12/337 (3%)

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D A+ +   +      P+T ++   L+ L   G      ++  +  +    PN +TY ++
Sbjct: 119 DAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGIL 178

Query: 416 MHGLRREGKLSEACDVVREMV--KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           + GL + G++ +A  V+  M   +    P  V +N ++  LC+ G++  A KF++E +  
Sbjct: 179 VKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRS 238

Query: 474 --GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
             GCA N V +  L   FC+ G++  A  L+  M   +  P+ VT  TI+  L   GRV 
Sbjct: 239 VHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVG 298

Query: 532 EATELMMKMLSKGLVP----TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--Y 585
            A E   +   + + P      VTY T++  +     V   ++L  +M+ +     A  Y
Sbjct: 299 AALEFFRE--KRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMY 356

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
             +I  L   G L++A  +   + +   + DA   ++L+  +  +     AY++   M  
Sbjct: 357 FTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKE 416

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             L PD+     +   L   G     D L+ + ++ G
Sbjct: 417 AGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGG 453


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 149/598 (24%), Positives = 269/598 (44%), Gaps = 60/598 (10%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y ++ +VY+++     K+   + A  V ++M   G+      +S LMVA+ +   +   +
Sbjct: 240 YTYNGLVYFLV-----KSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 294

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           ++L  M+   V PN+      I VL    +  +A R L  M+  G  P+V+T+  LI+  
Sbjct: 295 WLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVL 354

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           CD  RI DA  +  +M      PD+V+Y T++         + V ++   M  D   ++D
Sbjct: 355 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADG--YND 412

Query: 317 Q--------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                          GR+ EA E+ ++M Q G +P+  +Y ++++GF +      A ++ 
Sbjct: 413 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 472

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           + M  HG KPN  ++  F+N    +G+S++A +     + +   P+ +  + V+ GL + 
Sbjct: 473 KYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 532

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G+L  A  V  E+   G  P  +   ++I+   +  K D A K   + +   C  +V+  
Sbjct: 533 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVV 592

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            SLI    + G  +EA  +   +     +P   TY T++  L + G+V+E   L+ +M  
Sbjct: 593 NSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 652

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVI----------- 589
               P ++TY T++   C+ G V D L +L  M +K      ++YN VI           
Sbjct: 653 SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE 712

Query: 590 ----------------ENLCS-------FGYLEEAGKILGK-VLRTASKADASTCHVLVE 625
                             LC+        G ++EA  I+ +  L+  SK D S+CH L+E
Sbjct: 713 AFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLME 772

Query: 626 SYLNKGIPLLAYKVACRMFNRNL-IPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             L K     + + A  + +  + + D  LC  + + L  + K+ EA  L+ +F   G
Sbjct: 773 GILKKAGTEKSIEFAEIIASSGITLDDFFLCPLI-KHLCKQKKALEAHELVKKFKSFG 829



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 146/625 (23%), Positives = 269/625 (43%), Gaps = 54/625 (8%)

Query: 114 VLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIE 173
            LRS      AL+ F  A R+ R  H       ML+++           V  +M R+ ++
Sbjct: 142 ALRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVK 201

Query: 174 CRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
                F+ +       G LR+A   L +M++A +  N    N  ++ LV      +AL  
Sbjct: 202 ANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEV 261

Query: 234 LERMQLAGITPNVLTYNCLIKGY---------------CDLHRIK--------------- 263
            + M + G+ P+V TY+ L+  +                + H +K               
Sbjct: 262 YKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQ 321

Query: 264 -----DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
                +A +++ EM  +GC PD +++  ++  LC   RI + +D+  KM           
Sbjct: 322 ARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVT 381

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                + F D G  +   E+ N M   G   +VV YTAV++  C+VG + +A +M  +M 
Sbjct: 382 YITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMK 441

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  P   SY + ++G     +  +A E+    +     PN  T+ + ++   + G+  
Sbjct: 442 QKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESI 501

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A      M  KG  P  V  N ++  L + G++  AK+   E    G + + + +T +I
Sbjct: 502 KAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMI 561

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           +   +    +EA+ +  DM      PD +   ++ID L K GR +EA ++  ++    L 
Sbjct: 562 KCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLE 621

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKI 604
           PT  TY T++    + G+V++++ LLE+M           YN +++ LC  G + +A  +
Sbjct: 622 PTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDM 681

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
           L  +       D S+ + ++   + +     A+ + C+M  + LIPD      +    + 
Sbjct: 682 LYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVK 740

Query: 665 EGKSEEADTLMLRFVERGHIQPKSE 689
            G  +EA    L  ++   +QP S+
Sbjct: 741 IGLMKEA----LHIIKEYFLQPGSK 761



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 137/568 (24%), Positives = 243/568 (42%), Gaps = 55/568 (9%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            D +V   +++ L K      A ++   +    +E     ++ L+    R GK++  M++L
Sbjct: 588  DVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 647

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG---- 255
              M  +   PNL+  NT +  L     +  AL  L  M   G  P++ +YN +I G    
Sbjct: 648  EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKE 707

Query: 256  ---------YCDLHRI---------------------KDAIKLIDEMPLK-GCSPDKVSY 284
                     +C + ++                     K+A+ +I E  L+ G   D+ S 
Sbjct: 708  ERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSC 767

Query: 285  YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------------QGRIEEAKELVNQMSQ 332
            +++M  + K+   ++  +  E + +      D            Q +  EA ELV +   
Sbjct: 768  HSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKS 827

Query: 333  MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
             G      +Y +++ G      +D A+ +  +M   GC P+  +Y   L+ +   GKS+ 
Sbjct: 828  FGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM---GKSMR 884

Query: 393  AREMINTSEE---EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
              EM+   EE   + +    +TY+ ++ GL +  +L +A D+   ++ +GF PTP     
Sbjct: 885  IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGP 944

Query: 450  LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
            L+  L + G+++ A+    E L  GC  N   +  L+ G    G+ E+   L  DM    
Sbjct: 945  LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 1004

Query: 510  KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             +PD  +YT IID L K G++ +      ++L  GL P ++TY  +I    +  R+E+ +
Sbjct: 1005 INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAV 1064

Query: 570  KLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
             L  +M  K        YN +I +L   G   EAGK+  ++L    K +  T + L+  Y
Sbjct: 1065 SLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGY 1124

Query: 628  LNKGIPLLAYKVACRMFNRNLIPDLKLC 655
               G    AY    RM     +P+   C
Sbjct: 1125 SVSGSTDSAYAAYGRMIVGGCLPNSSTC 1152


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 236/470 (50%), Gaps = 30/470 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A RV  LM  RG  C   AF+Y  L+     AG +R AM V   M+  + AP+  +  T 
Sbjct: 126 ACRVFVLMPLRG--CLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATM 183

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +H L    +  +A   LE     G  PN++ YN LI GYC+   ++ A+K+ + M    C
Sbjct: 184 VHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRC 243

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNLFH---------DQGRIEEAKE 325
           SP+  +Y  ++  LCK  +++    L  +MV    + N+           ++G ++ A  
Sbjct: 244 SPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFR 303

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L++ M   G +P+  T++ +++  C+  ++++A+  L  +   G K N V YT+ ++GLC
Sbjct: 304 LLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLC 363

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             GK   A E++     E + P+A +YS ++ GL R+ KLS+A  ++ +M++KG   +PV
Sbjct: 364 KTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPV 423

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
              ++I  L RE   +G KK   + +  G   ++V +T  +R +C++G +E+A S++  M
Sbjct: 424 TYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQM 483

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY----RTVIHRYC- 560
                 P+ VTY T+I   +  G V +A      M+ KG  P   +Y    R V+ +   
Sbjct: 484 VDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSS 543

Query: 561 -------QVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEA 601
                  ++  ++DL  LLE +  +Q    A  Y+  I  LC    LEEA
Sbjct: 544 DNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEA 593



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 215/438 (49%), Gaps = 14/438 (3%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            ++ L+ AY  AG +  A   L+ +  A +AP+     + +        L  A R    M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
            L G      TY  L+ G      +++A+ +   M    C+PD   Y T++  LC+  R 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 298 KEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
           +E   L+E+ +++             + + + G +E A ++   M    C P+V TYT +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G C+ G++++A  +  +M   G +PN V+YTA + G C+ G    A  +++  E    
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            PN  T+SV++  L +  K+ EA   +  +VKKG     V    LI  LC+ GK+D A +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            MQ+ +++G   +  +++SLI G C++  L +A  +L+DM         VTYT IID L 
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRT 583
           +    E   ++  KM++ G+ P +VTY   +  YC+ GR+ED   ++ +M+ +       
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 584 AYNQVIENLCSFGYLEEA 601
            YN +I    + G + +A
Sbjct: 494 TYNTLIRGYANLGLVSQA 511



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 131/502 (26%), Positives = 237/502 (47%), Gaps = 15/502 (2%)

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
           A NL    T I+   +   +  A + L  +  AG+ P+   Y   + GYC    +  A +
Sbjct: 69  ARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACR 128

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------NLFH--- 315
           +   MPL+GC     +Y  ++  L     ++E   +   M  DS          + H   
Sbjct: 129 VFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLC 188

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
           + GR EEA+ L+ +    G  P++V Y A+++G+C  GE++ A K+ + M  + C PN  
Sbjct: 189 EAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVR 248

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +YT  ++GLC +GK   A  + +   E    PN +TY+ ++ G   EG L  A  ++  M
Sbjct: 249 TYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLM 308

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              G  P     ++LI +LC+  K++ A+ F+   + KG  VN V +TSLI G C+ G +
Sbjct: 309 ETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKI 368

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           + A  L+  M      PD  +Y+++ID L +  ++ +AT ++  M+ KG+  + VTY  +
Sbjct: 369 DAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTII 428

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I    +    E   K+ +KM++         Y   + + C  G +E+A  ++ +++    
Sbjct: 429 IDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             +  T + L+  Y N G+   A+     M  +   P+ +    V  RL+++  S +   
Sbjct: 489 FPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPN-EDSYTVLLRLVVKKSSSDNSV 547

Query: 674 LMLRFVERGHIQPKSEEHLQRQ 695
            + +  +   +Q   E+  +RQ
Sbjct: 548 DIWKIADMKDLQVLLEDITERQ 569



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/510 (24%), Positives = 223/510 (43%), Gaps = 72/510 (14%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G E     ++ L+  Y  AG++ +A+ V   M     +PN+      IH L    K+ +A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           +    RM  AG+ PNV+TY  LI+G C+   ++ A +L+  M   G  P+  ++  ++  
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LCK +++                       EEA+  +  + + G   + V YT++++G C
Sbjct: 327 LCKREKV-----------------------EEAQLFLGSLVKKGVKVNEVVYTSLIDGLC 363

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           + G++D A +++Q+M   G  P+  SY++ ++GLC   K  +A  M+    E+    + +
Sbjct: 364 KTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPV 423

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY++++  L RE        +  +M+  G  P  V   + ++S C EG+M+ A+  + + 
Sbjct: 424 TYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQM 483

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI---------- 520
           +++G   N+V + +LIRG+   G + +A S  + M      P+  +YT +          
Sbjct: 484 VDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSS 543

Query: 521 -------------------------------------IDALSKNGRVEEATELMMKMLSK 543
                                                I  L +  R+EEA    M M + 
Sbjct: 544 DNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNA 603

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEA 601
            L P+   Y ++I   C++  + D L LL+ M          +Y  +I +LC  G    A
Sbjct: 604 NLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTA 663

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKG 631
            ++ G +L   S  D     +L+   L KG
Sbjct: 664 KEVFGDLLLKESNYDEIVWKILIYGLLQKG 693



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/451 (23%), Positives = 178/451 (39%), Gaps = 68/451 (15%)

Query: 150 ILSKTKLCQG---------AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           +++ T L QG         A R+L LM   G+      FS L+ A  +  K+  A   L 
Sbjct: 282 VVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLG 341

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            + K  V  N ++  + I  L    K+  A   +++M   G  P+  +Y+ LI G C   
Sbjct: 342 SLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQK 401

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------- 311
           ++  A  ++++M  KG     V+Y  ++  L +E   +  + + +KM+            
Sbjct: 402 KLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYT 461

Query: 312 ---NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                + ++GR+E+A+ ++ QM   G  P++VTY  ++ G+  +G + QA    + M   
Sbjct: 462 VFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGK 521

Query: 369 GCKPNTVSYTA-----------------------------------------------FL 381
           G KPN  SYT                                                F+
Sbjct: 522 GWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFI 581

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
             LC   +  EA+      +    TP+   Y+ ++    R   L++A  ++  M K G+ 
Sbjct: 582 RCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYL 641

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P      ++I SLC  G    AK+   + L K    + + +  LI G  QKG + E  SL
Sbjct: 642 PHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSL 701

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           L  M      P       I   ++    V+E
Sbjct: 702 LSVMKEHGYQPSNTINAMITGEITVTNEVQE 732



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 8/239 (3%)

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +N L+ +L R          M+   ++  A N+  +T+LI  +C  GD+  A   L  + 
Sbjct: 44  LNTLLMALARHRMFPD----MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLL 99

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                PD+  YT+ +    + G +  A  + + M  +G + T  TY  ++H     G V 
Sbjct: 100 HAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVR 159

Query: 567 DLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           + + +   M     C      Y  ++  LC  G  EEA  +L + +    + +    + L
Sbjct: 160 EAMAVFVGM-RADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNAL 218

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++ Y N G    A KV   M      P+++   ++   L   GK E A  L  R VE G
Sbjct: 219 IDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 156/607 (25%), Positives = 281/607 (46%), Gaps = 39/607 (6%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           +  VLR       ALQFF WA  +  + H+   Y++MLEIL + +    A+  L  + RR
Sbjct: 89  VFEVLRLIKTPSKALQFFNWAP-ELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRR 147

Query: 171 G---IECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
               ++     F+ L+ +Y +AG  + ++ V + M+   V+P+++  N+ + +L+   + 
Sbjct: 148 SNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRT 207

Query: 228 AKALR-FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
             A   F E +   G+TP+  T+N LI+G+C    + +  +   EM    C PD V+Y T
Sbjct: 208 NMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNT 267

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDS-NLFHD-------------QGRIEEAKELVNQMSQ 332
           ++  LC+  ++    +++  MV  S NL  D             +  I+EA  +  +M  
Sbjct: 268 LVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVS 327

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ-QMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
            G  P+ +TY  ++ G C V ++D+ K++ +  +   G  P+T +    +N  C+ G   
Sbjct: 328 KGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLN 387

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK-------GFFPTP 444
           +A E+          P++ TYSV++  L + G    A  +  E+ +K       G  P  
Sbjct: 388 DALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLV 447

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
                + + LCR GK   A++  ++ + +G   + ++F  LI+G C++G  E    LL  
Sbjct: 448 AAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEAGYELL-- 504

Query: 505 MYLCKKD--PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           + + ++D  PD  TY ++ID L + G    A + + KM+    VP   T+ +++ R    
Sbjct: 505 VLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAK 564

Query: 563 GRVEDLLKLLEKMLSKQKCRTAYN---QVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
           G   +  + +  ML + K R   N     +  L   G  ++A KI+G +       D   
Sbjct: 565 GCAHESARFIMLML-EGKIRQNINLSTHTVRLLFGSGLRDKAFKIVGLLYANGYVVDMEE 623

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
              L+    +    LLA+K+      ++   D+ +C  V E L    +  EA  L    V
Sbjct: 624 ---LIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLYYELV 680

Query: 680 ERGHIQP 686
           E+G+ QP
Sbjct: 681 EKGNNQP 687



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/455 (21%), Positives = 206/455 (45%), Gaps = 29/455 (6%)

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN------------ 312
           A++  +  P  G + +  SY+ ++  L + + +   R+ +  +   SN            
Sbjct: 102 ALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNS 161

Query: 313 ---LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH-H 368
               +   G  +E+ ++ N M  +G  P VVT+ +++    + G  + A+ +  +M   +
Sbjct: 162 LIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTY 221

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G  P+T ++   + G C N    E              P+ +TY+ ++ GL R GK++ A
Sbjct: 222 GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIA 281

Query: 429 CDVVREMVKKG--FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
            +VV  MVKK     P  V    L++  C + ++D A    +E ++KG   N + + +LI
Sbjct: 282 HNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLI 341

Query: 487 RGFCQKGDLEEALSLLDDMYLCKK-DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           +G C+   +++   + +         PDT T  T+++A    G + +A E+  KM+   +
Sbjct: 342 KGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNV 401

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ---------KCRTAYNQVIENLCSFG 596
            P   TY  +I   CQ G  E   +L +++  K+             AY  + E LC  G
Sbjct: 402 RPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNG 461

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
              +A ++  ++++  ++ D  +  +L++ +  +G     Y++   M  R+ +PDL+  +
Sbjct: 462 KTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQ 520

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
            + + L+ +G+   A   + + ++  H+   S  H
Sbjct: 521 SLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFH 555


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 164/630 (26%), Positives = 283/630 (44%), Gaps = 67/630 (10%)

Query: 85  IELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWAD-RQWRYRHDPIV 143
           IE     +   +  + N L  +   ++   L +  +E  +L F Y+   ++  Y HDP  
Sbjct: 36  IEEEQTINTHYQNPVTNHLFEINTAKVVITLNNLRNEP-SLAFSYFNQLKESGYSHDPYT 94

Query: 144 YYMMLEILS--------KTKLCQGAKR-------VLRLMARRGIECRPEAFSYLMVAYSR 188
           Y  ++ IL          + L +  K+       ++ L    G     E+FS ++V  S 
Sbjct: 95  YAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEALGDGIANESFS-VLVQVSD 153

Query: 189 A--------GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
           A        G    A  VL   +    AP +L CN  ++ LV   K+  A+    +++  
Sbjct: 154 ALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAF 213

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G+ PN  TY   IKG+C    + +AI +  +M   G +P+  SY T +  LC   R    
Sbjct: 214 GLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGR---- 269

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
            DL  K++ D               ++N    M    DV  YT V+ GFC   +L +A+ 
Sbjct: 270 SDLGFKVLQD---------------VINAKIPM----DVFAYTVVIRGFCSEMKLKEAES 310

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L++M   G  P+   Y A ++G C  G  L+A  + +    +    N +  S ++ GL 
Sbjct: 311 ILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLS 370

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           + G  SE  +  +E  K G F      N+++ +LC+ GK++ A + + E   K    +++
Sbjct: 371 QMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDII 430

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
           N+T++I G+  KG + +AL++  +M      PD VTY  +    S+NG  +EA  L+  M
Sbjct: 431 NYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYM 490

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEE 600
            ++G+ P  VT+  +I   C  G+V+D     + +  ++KC   Y+ ++   C   ++ +
Sbjct: 491 ETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNL--EEKCLENYSAMVNGYCEANHVNK 548

Query: 601 AGKIL------GKVLRTAS--KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           A  +L      G++L+ AS  K   + C    E    K + LL   VA      N+ P +
Sbjct: 549 AFALLIRLSKQGRILKKASFFKLLGNLCS---EGDSEKALCLLETMVAL-----NINPTM 600

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
            +  KV   L   G+ E+A  +    V+RG
Sbjct: 601 IMYSKVIGALFQAGEMEKAQYVFNMLVDRG 630



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 228/493 (46%), Gaps = 65/493 (13%)

Query: 148 LEILSKTKLCQGAKRVL--RLMARRGIECR------------------PEAFSYLMV--A 185
            ++L +TK C  A ++L    +  R +E R                  P  ++Y +    
Sbjct: 169 FDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKG 228

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
           + R G L  A+ V   M+++ V PN     T I  L +  +     + L+ +  A I  +
Sbjct: 229 FCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMD 288

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           V  Y  +I+G+C   ++K+A  ++ EM  +G +PD   Y  ++   C    + +   L +
Sbjct: 289 VFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHD 348

Query: 306 KMVND---------SNLFHDQGRIEEAKELVNQMSQ---MGCIPDVVTYTAVVNGFCRVG 353
           +MV+          S++     ++  A E+ NQ  +   MG   D   Y  V++  C++G
Sbjct: 349 EMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLG 408

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           ++++A ++L +M      P+ ++YT  ++G    GK ++A  +    ++    P+ +TY+
Sbjct: 409 KVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYN 468

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM----QE 469
           V+  G  R G   EA  ++  M  +G  P  V  N++I+ LC  GK+D A+ F     ++
Sbjct: 469 VLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEK 528

Query: 470 CL-------NKGCAVNVVN--------------------FTSLIRGFCQKGDLEEALSLL 502
           CL       N  C  N VN                    F  L+   C +GD E+AL LL
Sbjct: 529 CLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLL 588

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           + M     +P  + Y+ +I AL + G +E+A  +   ++ +GL P V+TY  +I+ YC++
Sbjct: 589 ETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRM 648

Query: 563 GRVEDLLKLLEKM 575
            ++++   +L  M
Sbjct: 649 NKMKEAWHVLGDM 661



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 235/521 (45%), Gaps = 79/521 (15%)

Query: 131 ADRQWRYRHDPIVYYMMLEILSKTKLCQG---------AKRVLRLMARRGIECRPEAFSY 181
           +D  ++   D I   + +++ + T + +G         A+ +LR M ++G    P+ + Y
Sbjct: 270 SDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFA--PDVYVY 327

Query: 182 --LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV---VGNKLAKALRFLER 236
             L+  Y   G L  A+ +   M    V  N +I ++ +  L    + +++A   +  ++
Sbjct: 328 CALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKK 387

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEK 295
           M   GI  +   YN ++   C L ++++A++L+ EM  K   PD ++Y TV+ GY  K K
Sbjct: 388 M---GIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGK 444

Query: 296 RI------KEVRDLMEK--MVNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVT--- 341
            +      +E++D+  K  +V  + L   F   G  +EA  L+N M   G  PD VT   
Sbjct: 445 VVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNM 504

Query: 342 ----------------------------YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                                       Y+A+VNG+C    +++A  +L ++   G    
Sbjct: 505 IIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILK 564

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             S+   L  LC  G S +A  ++ T       P  I YS V+  L + G++ +A  V  
Sbjct: 565 KASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFN 624

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            +V +G  P  +   ++I   CR  KM  A   + +  N+G   +V+ +T L+   C K 
Sbjct: 625 MLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNN-CSKI 683

Query: 494 DLEEALSLLDDM------------YLCKKD----PDTVTYTTIIDALSKNGRVEEATELM 537
           DL  + S LD M            +   KD    PD + YT +ID   K   +++A  L 
Sbjct: 684 DLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLF 743

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            +M+ +GL P  VTY  ++  YC VG ++  + L ++ML+K
Sbjct: 744 NEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNK 784



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 177/425 (41%), Gaps = 46/425 (10%)

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD-LMEKMVNDSNLFHDQGRIEEA 323
           A    +++   G S D  +Y  ++  LC     +++   LME +  D NL  D G +   
Sbjct: 76  AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNL--DFGIVNLF 133

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
           + L + ++       V    A++      G  DQA  +L Q  H G  P  +S    +N 
Sbjct: 134 EALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNR 193

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           L  + K   A  +    +     PN  TY++ + G  R+G L+EA DV R+M + G  P 
Sbjct: 194 LVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPN 253

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
                  I+ LC  G+ D   K +Q+ +N    ++V  +T +IRGFC +  L+EA S+L 
Sbjct: 254 SFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILR 313

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M      PD   Y  +I      G + +A  L  +M+SKG+    V   +++    Q+G
Sbjct: 314 EMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMG 373

Query: 564 ---RVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
               V +  K  +KM     + C   YN V++ LC  G +EEA ++L             
Sbjct: 374 MASEVANQFKEFKKMGIFFDEAC---YNVVMDALCKLGKVEEAVELL------------- 417

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
                                   M  + ++PD+     V     L+GK  +A  +    
Sbjct: 418 ----------------------VEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREM 455

Query: 679 VERGH 683
            + GH
Sbjct: 456 KDIGH 460



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 122/249 (48%), Gaps = 8/249 (3%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           ++++G   +  +F  L+      G    A+ +L  M    + P +++ +  I  L    +
Sbjct: 556 LSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGE 615

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + KA      +   G+ P+V+TY  +I GYC ++++K+A  ++ +M  +G  PD ++Y T
Sbjct: 616 MEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITY-T 674

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           V+   C +  ++     ++ M +  N+        +   L ++M  M   PDV+ YT ++
Sbjct: 675 VLLNNCSKIDLRSSSSSLDAMKSKENMM-------DPSALWSEMKDMDIKPDVICYTVLI 727

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C+   +  A  +  +M   G  P+TV+YTA L+G C+ G   +A  + +    +   
Sbjct: 728 DKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIR 787

Query: 407 PNAITYSVV 415
           P+A T SV+
Sbjct: 788 PDAHTMSVL 796


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 239/518 (46%), Gaps = 37/518 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A++V   M  R +     ++  ++V Y R G++ +    L  M +   A +   C   I 
Sbjct: 212 AEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMIS 271

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A  + ++    G+ PN++ ++ LI G C +  IK A ++++EM  KG  P
Sbjct: 272 TFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKP 331

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-------------FHDQGRIEEAKEL 326
           +  ++  ++  LCK+   ++   L  K+V   N              +  + ++  A+ L
Sbjct: 332 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEML 391

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           + +M + G +P+  TYT +++G C+ G   +A +++  M   G  PN  +Y A ++GLC 
Sbjct: 392 LIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCK 451

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G+  EA +++    +     + +TY++++    R+    +A  +   M K G  P    
Sbjct: 452 KGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHT 511

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM- 505
            N+LI + CR+ K++ ++K  +E +  G       +TS+I G+C+ G +  A+     M 
Sbjct: 512 YNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMR 571

Query: 506 -YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
            Y CK  PD++TY  +I  L    +++EA +L   M+  GL P  VT  T+ + YC+ G 
Sbjct: 572 DYGCK--PDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGD 629

Query: 565 VEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
               + +LE++  K   RT  N +I  LCS   +  A     K+L      D        
Sbjct: 630 SATAMIILERLEKKLWIRTV-NTLIRKLCSEKKVGVAALFFHKLLDKDLNVDR------- 681

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
                  I L A+  AC   N+       L   +SER+
Sbjct: 682 -------ITLAAFTTACYESNK-----FALVSDLSERI 707



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/556 (26%), Positives = 260/556 (46%), Gaps = 56/556 (10%)

Query: 78  VREVCRLI-------ELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADER---VALQF 127
           VR +C L+             SP L  E+     SL   Q+  V+ S A E    V+L F
Sbjct: 67  VRSICLLVCESYQQTSFSKPSSPSLNLEINP--NSLTHEQVITVVASLAQEAGSVVSLSF 124

Query: 128 FYWADRQWRYRHDPIVYYMMLEILSKTKLCQG-----AKRVLRLMARRGIECRPEAFSYL 182
           F W     ++RH     +M L I+  T          A  V++ M R             
Sbjct: 125 FNWVIGFSKFRH-----FMRLYIVCATTFLNNDNLDRATEVMQCMVR------------- 166

Query: 183 MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
             ++S  GKL+ A+ ++  MQ   +     I N  I V +    +  A +  + M    +
Sbjct: 167 --SFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAV 224

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK------VSYYTVMGYLCKE-- 294
            P+  +Y  ++ GYC + RI D  + + +M  +G + D       +S ++  G++ +   
Sbjct: 225 VPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFW 284

Query: 295 --KRIKEVRDLMEKMVNDSNLFHDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
             K+  ++  L   ++N S+L +     G I++A E++ +M + G  P+V T+TA+++G 
Sbjct: 285 YFKKWVQM-GLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 350 CRVGELDQAKKM-LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
           C+ G  ++A ++ L+ +     KPN  +YT  +NG C   K   A  ++   +E+   PN
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
             TY+ ++ G  + G    A +++  M K+GF P     N +I  LC++G+   A K ++
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
             L  G   + V +T LI  FC++ D ++AL++   M+     PD  TY  +I    +  
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAY 585
           +VEE+ +L  + +  GL+PT  TY ++I  YC+ G +   +K   KM     C+     Y
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKM-RDYGCKPDSITY 582

Query: 586 NQVIENLCSFGYLEEA 601
             +I  LC+   L+EA
Sbjct: 583 GALISGLCNESKLDEA 598



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 184/392 (46%), Gaps = 12/392 (3%)

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
           ++M+ MV     F + G+++EA  +V +M   G +        V++    +G +D A+K+
Sbjct: 159 EVMQCMVRS---FSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKV 215

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             +M      P++ SY   + G C  G+  +    +    E  +  +  T ++++     
Sbjct: 216 FDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSE 275

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           +G ++ A    ++ V+ G  P  +  + LI  LC+ G +  A + ++E + KG   NV  
Sbjct: 276 KGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYT 335

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKD---PDTVTYTTIIDALSKNGRVEEATELMM 538
            T+LI G C+KG  E+A  L   + L + D   P+  TYT +I+   K  ++  A  L++
Sbjct: 336 HTALIDGLCKKGWTEKAFRLF--LKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLI 393

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQV---GRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSF 595
           +M  +GLVP   TY  +I  +C+    GR  +L+ L+ K        T YN +I+ LC  
Sbjct: 394 RMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFT-YNAIIDGLCKK 452

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
           G   EA K+L + L++   AD  T  +L+  +  +     A  +  RMF   L PD+   
Sbjct: 453 GRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTY 512

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
             +      + K EE++ L    V  G +  K
Sbjct: 513 NVLIATFCRQKKVEESEKLFEEAVGLGLLPTK 544



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 169/383 (44%), Gaps = 32/383 (8%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A + F    R   Y+ +   Y  M+    K +    A+ +L  M  +G+      ++ L+
Sbjct: 352 AFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLI 411

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             + +AG    A  ++ +M K    PN+   N  I  L    +  +A + L R   +G+ 
Sbjct: 412 DGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLH 471

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
            + +TY  LI  +C     K A+ +   M   G  PD  +Y  ++   C++K+++E   L
Sbjct: 472 ADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKL 531

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            E+ V                        +G +P   TYT+++ G+CR G +  A K   
Sbjct: 532 FEEAVG-----------------------LGLLPTKETYTSMICGYCRDGHISSAIKFFH 568

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M  +GCKP++++Y A ++GLC+  K  EA ++  T  +   +P  +T   + +   ++G
Sbjct: 569 KMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQG 628

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
             + A  ++  + KK +  T   +N LI+ LC E K+  A  F  + L+K   V+ +   
Sbjct: 629 DSATAMIILERLEKKLWIRT---VNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLA 685

Query: 484 SLIRG------FCQKGDLEEALS 500
           +          F    DL E +S
Sbjct: 686 AFTTACYESNKFALVSDLSERIS 708


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 250/538 (46%), Gaps = 52/538 (9%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            D I Y  ++  + +       K +L  M + GI      ++ L+  Y +AG ++ A+   
Sbjct: 469  DVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHF 528

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
              + +  +  N +I N  +H       + +A  F + M    I+ + +++N +I  YC  
Sbjct: 529  VDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHR 588

Query: 260  HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
              I  A  + D+M   G SP+  +Y  ++  LC+   + + R  M  +++     D   F
Sbjct: 589  GNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTF 648

Query: 315  HD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
            +         G ++EA +L  +M +  C+PD+ TYT +++GFCR G++  A  +LQ M  
Sbjct: 649  NALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLE 708

Query: 368  HGCKPNTVSYTAFLNGLCHNGKSLEA---------------------------------- 393
             G  P+TV+YT  LNGL + G+   A                                  
Sbjct: 709  KGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVN 768

Query: 394  ---REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
               R M +  + E + PN+ +Y+++MHG  + G+ S++  + + MV+KG  P  V   LL
Sbjct: 769  TIKRMMSDMYQNEVY-PNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLL 827

Query: 451  IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
            I  L   G +D A KF+++ + +G   + + F  LI  F +K  +  AL + + M     
Sbjct: 828  ILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHM 887

Query: 511  DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
             P + T++ +I+ L + G ++ + +++ +ML  GL P    Y  +++  C+VG ++   +
Sbjct: 888  SPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFR 947

Query: 571  LLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            L E+M  +       A + +I  LC  G LEEA  +   ++R+      +T   L+ S
Sbjct: 948  LKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHS 1005



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 164/724 (22%), Positives = 308/724 (42%), Gaps = 110/724 (15%)

Query: 17  AEFDKSEKCDFDIFAEEVEEGEDGSDSDDHFMVLD--SFDKYRVNREEIRRVVLEEDEFR 74
           + FD +    F++  +   +     D+    + +D   F    V+   I   ++EE E +
Sbjct: 149 SRFDPTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESK 208

Query: 75  H-------------PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADE 121
           H             PL    C ++ L S  +    GE R     L+  + C +  S    
Sbjct: 209 HVWLFLRESLARKFPLGVTTCNIL-LNSLCT---NGEFRKAEDMLQKMKSCHISNSVTYN 264

Query: 122 RVALQFFYWADRQWRYRH---------------DPIVYYMMLEILSKTKLCQGAKRVLRL 166
            +     +W  ++ R++                D   Y +M++ L + K    A  +L+ 
Sbjct: 265 TI----LHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKR 320

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M +  +      ++ L+  + R GK+ +A YV + M +  + P++    T I       +
Sbjct: 321 MRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRR 380

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + KAL  L  MQ+ G+ P+ LTY+ L+ GYC +  +  AI L++++  +G + +K     
Sbjct: 381 IDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKT---- 436

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
                            M  ++ D   F   G I +AK+++  M + G  PDV+TY+A++
Sbjct: 437 -----------------MRTILIDG--FCQVGEISKAKQILKSMFEDGIDPDVITYSALI 477

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           NG CR+ ++ + K++L +M   G  PN V YT  +   C  G   EA +           
Sbjct: 478 NGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLV 537

Query: 407 PNAITYSVVMHGLRREGKLSE-----------------------------------ACDV 431
            N + ++ ++H   REG ++E                                   A  V
Sbjct: 538 ANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSV 597

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             +MV+ G+ P       L++ LC+ G +  A++FM   L+   A++   F +L+ G C+
Sbjct: 598 YDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICR 657

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G L+EAL L + M      PD  TYT ++    + G++  A  ++  ML KG+VP  V 
Sbjct: 658 YGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVA 717

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKV 608
           Y  +++     G+V+    +  +++ K+       AYN ++        +    +++  +
Sbjct: 718 YTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDM 777

Query: 609 LRTASKADASTCHVLVESYLNKGI---PLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            +     ++++ ++L+  Y+ +G     L  YK    M  + + PD      V+ RL++ 
Sbjct: 778 YQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKY---MVRKGIRPD-----NVTYRLLIL 829

Query: 666 GKSE 669
           G SE
Sbjct: 830 GLSE 833



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 144/631 (22%), Positives = 264/631 (41%), Gaps = 95/631 (15%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y  M++   + +    A  +L  M   G+      +S L+  Y +   L  A+Y++  ++
Sbjct: 368 YTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLK 427

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
              +  N  +    I       +++KA + L+ M   GI P+V+TY+ LI G C + ++ 
Sbjct: 428 SRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMH 487

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSNLF 314
           +  +++  M   G  P+ V Y T++ Y CK   +KE          R L+   V  + L 
Sbjct: 488 ETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALL 547

Query: 315 HD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           H    +G I EA+     MS+M    D V++  +++ +C  G +  A  +   M  +G  
Sbjct: 548 HAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYS 607

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN  +Y   L GLC  G  ++AR+ ++   +  +  +  T++ ++ G+ R G L EA D+
Sbjct: 608 PNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDL 667

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             +M+K    P      +L+   CR+GK+  A   +Q  L KG   + V +T L+ G   
Sbjct: 668 CEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLIN 727

Query: 492 KGDLEEAL------------------------------------SLLDDMYLCKKDPDTV 515
           +G ++ A                                      ++ DMY  +  P++ 
Sbjct: 728 EGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSA 787

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           +Y  ++    K G+  ++  L   M+ KG+ P  VTYR +I    + G ++  +K LEKM
Sbjct: 788 SYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKM 847

Query: 576 L-------------------SKQKCRTA------------------YNQVIENLCSFGYL 598
           +                    K K   A                  ++ +I  L   GYL
Sbjct: 848 VLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYL 907

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           + + K+L ++L+   + + +    LV +    G    A+++   M    ++P      +V
Sbjct: 908 DHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVP-----AEV 962

Query: 659 SERLILE-----GKSEEADTLMLRFVERGHI 684
           +E  I+      GK EEA  +    +  G +
Sbjct: 963 AESSIIRGLCRCGKLEEAVIVFSSMMRSGMV 993



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 233/534 (43%), Gaps = 53/534 (9%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP-----------------EAFSYLMVA 185
           VY M + IL + ++   A  VL+ +A  G  C                     F  L+ A
Sbjct: 106 VYCMAVPILIQAQMHSQAMSVLKHLAVTGFSCTAIFTSLLRTISRFDPTNHVVFELLVKA 165

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP- 244
           Y +  K+ +A   +  M       + + CNT ++ LV   +      FL R  LA   P 
Sbjct: 166 YVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFL-RESLARKFPL 224

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS-PDKVSYYTVMGYLCKEKRIKEVRDL 303
            V T N L+   C     + A  ++ +M  K C   + V+Y T++ +  K+ R K    +
Sbjct: 225 GVTTCNILLNSLCTNGEFRKAEDMLQKM--KSCHISNSVTYNTILHWYVKKGRFKAALCV 282

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
           +E M  DS                          DV TY  +++  CR+    +A  +L+
Sbjct: 283 LEDMERDS-----------------------VQADVYTYNIMIDKLCRIKRSTRAFLLLK 319

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M      P+  +Y   +NG    GK   AR + N    +   P+  TY+ ++ G  R  
Sbjct: 320 RMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNR 379

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           ++ +A  ++ EM   G  P+ +  + L+   C+   +  A   M++  ++G  +N    T
Sbjct: 380 RIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRT 439

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            LI GFCQ G++ +A  +L  M+    DPD +TY+ +I+ + +  ++ E  E++ +M   
Sbjct: 440 ILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKS 499

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIEN--LCSF---GYL 598
           G++P  V Y T+I  YC+ G V++ LK    +  +       N VI N  L +F   G +
Sbjct: 500 GILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRG---LVANPVIHNALLHAFYREGMI 556

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
            EA      + R     D+ + + +++SY ++G  + A+ V   M      P++
Sbjct: 557 TEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNV 610



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 218/506 (43%), Gaps = 66/506 (13%)

Query: 128  FYWADRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIEC--------RPE 177
            F   D   RY + P V  Y  +L       LCQG   V    AR+ + C          +
Sbjct: 595  FSVYDDMVRYGYSPNVCTYQNLLR-----GLCQGGHLV---QARQFMSCLLDIPFAIDEK 646

Query: 178  AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
             F+ L++   R G L  A+ +   M K    P++      +       K+  AL  L+ M
Sbjct: 647  TFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMM 706

Query: 238  QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKR 296
               G+ P+ + Y CL+ G  +  ++K A  +  E+  K G   D ++Y ++M    K + 
Sbjct: 707  LEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRN 766

Query: 297  IKEVRDLMEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            +  ++ +M  M  +         + L H    +G+  ++  L   M + G  PD VTY  
Sbjct: 767  VNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRL 826

Query: 345  VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
            ++ G    G +D A K L++M   G  P+ + +   +       K   A ++ N  +   
Sbjct: 827  LILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLH 886

Query: 405  WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP---------------------- 442
             +P++ T+S +++GL R+G L  +  V+ EM++ G  P                      
Sbjct: 887  MSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAF 946

Query: 443  -----------TPVEI--NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
                        P E+  + +I+ LCR GK++ A       +  G    V  FT+L+   
Sbjct: 947  RLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSL 1006

Query: 490  CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
            C++  + +AL L   M LC+   D V+Y  +I  L K+  + +A +L  +M SKGL P +
Sbjct: 1007 CKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNI 1066

Query: 550  VTYRTVIHRYCQVGRVEDLLKLLEKM 575
             TY T+       GRV++  +LLE +
Sbjct: 1067 TTYITLTGAMYSTGRVQNGEELLEDI 1092



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 135/306 (44%), Gaps = 23/306 (7%)

Query: 138  RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
            R D + Y +++  LS+  L   A + L  M   GI      F  L+ A+S   K+ NA+ 
Sbjct: 818  RPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQ 877

Query: 198  VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            V + M+   ++P+    +  I+ L+    L  + + L  M   G+ PN   Y  L+   C
Sbjct: 878  VFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKC 937

Query: 258  DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
             +  I  A +L +EM   G  P +V+  +++  LC+                        
Sbjct: 938  RVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCR-----------------------C 974

Query: 318  GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            G++EEA  + + M + G +P V T+T +++  C+  ++  A  + + M     + + VSY
Sbjct: 975  GKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSY 1034

Query: 378  TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
               + GLC +    +A ++    + +   PN  TY  +   +   G++    +++ ++ +
Sbjct: 1035 NVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEE 1094

Query: 438  KGFFPT 443
            +G  P 
Sbjct: 1095 RGLIPA 1100



 Score = 39.7 bits (91), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 43/237 (18%)

Query: 440 FFPT-PVEINLLIQSLCREGK-MDGAKK--FMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           F PT  V   LL+++  +E K +D A    FM +C   G   + V+  +++    ++G+ 
Sbjct: 151 FDPTNHVVFELLVKAYVKERKVLDAAVAVLFMDDC---GFKASPVSCNTILNALVEEGES 207

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTII-DALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           +     L +  L +K P  VT   I+ ++L  NG   +A +++ KM S   +   VTY T
Sbjct: 208 KHVWLFLRES-LARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCH-ISNSVTYNT 265

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           ++H Y + GR +  L +LE M                                  R + +
Sbjct: 266 ILHWYVKKGRFKAALCVLEDME---------------------------------RDSVQ 292

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           AD  T +++++          A+ +  RM   +L PD      +      EGK   A
Sbjct: 293 ADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHA 349


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 197/406 (48%), Gaps = 24/406 (5%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID-EMP 273
           N  I      + L  A   L  M + G+  N  T + +++G C   R+  A++  D  + 
Sbjct: 29  NVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLE 88

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQM 333
           L    PD VSY T++  LCK  R+    DL  KMV                      +  
Sbjct: 89  LAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMV----------------------AAG 126

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           GC P+  TY A+V+G C+   LD A+ ++ +       P+ V+Y   +  L   G+  EA
Sbjct: 127 GCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEA 186

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
                   EE + P  ++++ ++ GL R  +L++A +V  EM+ + F P  V  +++I  
Sbjct: 187 LATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDG 246

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           LC+  ++D A++ +   +++GC  ++V +T L+ GF   G L+ AL LL  M      PD
Sbjct: 247 LCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPD 306

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VTYT +ID L K GRV++A E+  ++++    P VVTY  +I  YC+  RV++  K++ 
Sbjct: 307 VVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR 366

Query: 574 KMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
           +M  +    T YN +I  L      EEA  +  ++       DA T
Sbjct: 367 EMACRPNVVT-YNTMIWGLSMVDRNEEAYGMFREMSECGFVPDART 411



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 196/389 (50%), Gaps = 17/389 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL-RFLERM 237
           ++ L+  +  A  L  A  +L  M    +  N    +  +  L    ++A+AL  F   +
Sbjct: 28  YNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASL 87

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM-PLKGCSPDKVSYYTVMGYLCKEKR 296
           +LA   P+V++Y  LI G C L R+  A  L  +M    GC P+  +Y  ++  LCK+ R
Sbjct: 88  ELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDR 147

Query: 297 IKEVR---------DLMEKMVNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
           +   R         D    +V  + L       GR++EA     QM++ G +P +V++ A
Sbjct: 148 LDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNA 207

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++ G CR   L  A ++  +M      PN V+Y+  ++GLC + +  EA+++++    E 
Sbjct: 208 IITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 267

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P+ + Y+ ++ G    G+L  A  ++R MV +G  P  V   ++I  LC+ G++D A 
Sbjct: 268 CRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAH 327

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           +  +E +   C+ NVV +++LI G+C+   ++E   ++ +M  C+  P+ VTY T+I  L
Sbjct: 328 EIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM-ACR--PNVVTYNTMIWGL 384

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           S   R EEA  +  +M   G VP   TYR
Sbjct: 385 SMVDRNEEAYGMFREMSECGFVPDARTYR 413



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 172/333 (51%), Gaps = 18/333 (5%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY-- 181
           AL+ F  +      + D + Y  ++  L K      A  + R M   G  CRP AF+Y  
Sbjct: 79  ALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAG-GCRPNAFTYNA 137

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+    +  +L  A  V++  +K   AP+++  NT +  L    ++ +AL    +M   G
Sbjct: 138 LVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG 197

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             P ++++N +I G C   R+ DA+++ +EM  +   P+ V+Y  V+  LCK  ++ E +
Sbjct: 198 YVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQ 257

Query: 302 DLMEKMVNDS---NL---------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            L+++MV++    +L         F   GR++ A  L+ +M   GCIPDVVTYT V++  
Sbjct: 258 QLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKL 317

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+VG +D A ++ +++  + C PN V+Y+A + G C   +  E  +++    E    PN 
Sbjct: 318 CKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVM---REMACRPNV 374

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           +TY+ ++ GL    +  EA  + REM + GF P
Sbjct: 375 VTYNTMIWGLSMVDRNEEAYGMFREMSECGFVP 407



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 153/341 (44%), Gaps = 76/341 (22%)

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHG------------------------------ 369
           VTY  ++ GFC   +LD A  +L++M   G                              
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 370 ------CKPNTVSYTAFLNGLCHNGKS--------------------------------- 390
                  +P+ VSYT  +NGLC  G+                                  
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 391 ---LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
                AR +I  + +  + P+ +TY+ +M  L + G++ EA     +M ++G+ PT V  
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N +I  LCR  ++  A +   E +++    N+V ++ +I G C+   L+EA  LLD M  
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD V YT ++   S  GR++ A  L+ +M+S+G +P VVTY  VI + C+VGRV+D
Sbjct: 266 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDD 325

Query: 568 LLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKIL 605
             ++  ++++  KC      Y+ +I   C    ++E GK++
Sbjct: 326 AHEIFRELVAN-KCSPNVVTYSALIGGYCRASRVDEGGKVM 365



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 26/288 (9%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R+  +  D + Y  ++  L +      A      M   G      +F+ ++    RA +L
Sbjct: 159 RKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRL 218

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            +A+ V + M      PNL+  +  I  L   ++L +A + L+RM   G  P+++ Y  L
Sbjct: 219 ADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPL 278

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           + G+    R+  A+ L+  M  +GC PD V+Y  V+  LCK                   
Sbjct: 279 VLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCK------------------- 319

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                GR+++A E+  ++    C P+VVTY+A++ G+CR   +D+  K++++M    C+P
Sbjct: 320 ----VGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRP 372

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           N V+Y   + GL    ++ EA  M     E  + P+A TY  +   LR
Sbjct: 373 NVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALR 420



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 123/281 (43%), Gaps = 43/281 (15%)

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           +++TY+V++ G      L  A  ++REM  +G        ++++Q LCR G++  A +  
Sbjct: 24  SSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHF 83

Query: 468 QECLNKGCA-VNVVNFTSLIRGFCQKGDLEEALSLLDDMYL---CKKDPDTVTYTTIIDA 523
              L    A  +VV++T+LI G C+ G ++ A  L   M     C+  P+  TY  ++D 
Sbjct: 84  DASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCR--PNAFTYNALVDG 141

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
           L K  R++ A  ++ +   +   P VVTY T++    Q+GRV++ L    +M  +    T
Sbjct: 142 LCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPT 201

Query: 584 --AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
             ++N +I  LC    L +A ++  +                                  
Sbjct: 202 LVSFNAIITGLCRARRLADALEVFNE---------------------------------- 227

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            M +R+  P+L     V + L    + +EA  L+ R V  G
Sbjct: 228 -MIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 267



 Score = 46.2 bits (108), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 4/181 (2%)

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
           C+    +VTY  +I        ++ A  L+ +M  +G+     T   ++   C+ GRV  
Sbjct: 19  CQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQ 78

Query: 568 LLKLLEKMLS---KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS-KADASTCHVL 623
            L+  +  L     Q    +Y  +I  LC  G ++ A  +  K++     + +A T + L
Sbjct: 79  ALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNAL 138

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           V+    +     A  V      R+  PD+     +   L   G+ +EA     +  E G+
Sbjct: 139 VDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGY 198

Query: 684 I 684
           +
Sbjct: 199 V 199


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 236/480 (49%), Gaps = 33/480 (6%)

Query: 179 FSYLMVAYSRAGK--LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           F+ L+ A ++  K  L  ++ +L  M K    P+++  ++ ++    G +++ A+  +++
Sbjct: 45  FNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 104

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M   G  P+ +T+  LI G    ++  +A+ L+D M  +GC P+ V+Y  V+  LCK   
Sbjct: 105 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK--- 161

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                               +G I+ A  L+N+M       DVV +  +++  C+   +D
Sbjct: 162 --------------------RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
            A  + ++M   G +PN V+Y++ ++ LC  G+  +A ++++   E+   PN +T++ ++
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
               +EGK  EA  +  +M+K+   P     N LI   C   ++D AK+  +  ++K C 
Sbjct: 262 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            ++  + +LI+GFC+   +E+   L  +M       DTVTYTT+I  L  +G  + A ++
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 381

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA-----YNQVIEN 591
             +M+S G+ P ++TY  ++   C  G++E  L++ + M   QK         Y  +IE 
Sbjct: 382 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM---QKSEIKLDIYIYTTMIEG 438

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           +C  G +++   +   +     K +  T + ++    +K +   AY +  +M     +PD
Sbjct: 439 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 498



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 212/421 (50%), Gaps = 12/421 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M + G E      S L+  Y    ++ +A+ ++  M +    P+ +   T IH L + NK
Sbjct: 70  MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 129

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
            ++A+  ++RM   G  PN++TY  ++ G C    I  A  L+++M       D V + T
Sbjct: 130 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 189

Query: 287 VMGYLCKEKRIKEVRDLMEKM---------VNDSNLFH---DQGRIEEAKELVNQMSQMG 334
           ++  LCK + + +  +L ++M         V  S+L       GR  +A +L++ M +  
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 249

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P++VT+ A+++ F + G+  +A+K+   M      P+  +Y + +NG C + +  +A+
Sbjct: 250 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 309

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +M      +   P+  TY+ ++ G  +  ++ +  ++ REM  +G     V    LIQ L
Sbjct: 310 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 369

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
             +G  D A+K  ++ ++ G   +++ ++ L+ G C  G LE+AL + D M   +   D 
Sbjct: 370 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 429

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
             YTT+I+ + K G+V++  +L   +  KG+ P VVTY T+I   C    +++   LL+K
Sbjct: 430 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 489

Query: 575 M 575
           M
Sbjct: 490 M 490



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 206/422 (48%), Gaps = 20/422 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
           YR D I +  ++  L        A  ++  M +RG  C+P   +Y +V     + G +  
Sbjct: 110 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDIDL 167

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A  +L+ M+ A +  +++I NT I  L     +  AL   + M+  GI PNV+TY+ LI 
Sbjct: 168 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 227

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DS 311
             C   R  DA +L+ +M  K  +P+ V++  ++    KE +  E   L + M+    D 
Sbjct: 228 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 287

Query: 312 NLF-----------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
           ++F           HD  R+++AK++   M    C PD+ TY  ++ GFC+   ++   +
Sbjct: 288 DIFTYNSLINGFCMHD--RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 345

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           + ++M H G   +TV+YT  + GL H+G    A+++      +   P+ +TYS+++ GL 
Sbjct: 346 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 405

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
             GKL +A +V   M K            +I+ +C+ GK+D           KG   NVV
Sbjct: 406 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 465

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + ++I G C K  L+EA +LL  M      PD+ TY T+I A  ++G    + EL+ +M
Sbjct: 466 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525

Query: 541 LS 542
            S
Sbjct: 526 RS 527



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 192/421 (45%), Gaps = 33/421 (7%)

Query: 221 LVVGNKLAKALRFLERMQLAG------ITPNVLTYNCLIKGYCDLHRIKDAIKL--IDEM 272
           L VG    K L+  + + L G        P++  +N L+     + +    I L  + +M
Sbjct: 11  LFVGISWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKM 70

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQ 332
              G  P  V+  +++   C  KRI                        +A  LV+QM +
Sbjct: 71  MKLGYEPSIVTLSSLLNGYCHGKRI-----------------------SDAVALVDQMVE 107

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           MG  PD +T+T +++G     +  +A  ++ +M   GC+PN V+Y   +NGLC  G    
Sbjct: 108 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 167

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A  ++N  E      + + ++ ++  L +   + +A ++ +EM  KG  P  V  + LI 
Sbjct: 168 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 227

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC  G+   A + + + + K    N+V F +LI  F ++G   EA  L DDM     DP
Sbjct: 228 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 287

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D  TY ++I+    + R+++A ++   M+SK   P + TY T+I  +C+  RVED  +L 
Sbjct: 288 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 347

Query: 573 EKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
            +M  +        Y  +I+ L   G  + A K+  +++      D  T  +L++   N 
Sbjct: 348 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 407

Query: 631 G 631
           G
Sbjct: 408 G 408



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 178/348 (51%), Gaps = 2/348 (0%)

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+ +M ++G  P +VT ++++NG+C    +  A  ++ QM   G +P+T+++T  ++GL 
Sbjct: 66  LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 125

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            + K+ EA  +++   +    PN +TY VV++GL + G +  A +++ +M         V
Sbjct: 126 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 185

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N +I SLC+   +D A    +E   KG   NVV ++SLI   C  G   +A  LL DM
Sbjct: 186 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 245

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
              K +P+ VT+  +IDA  K G+  EA +L   M+ + + P + TY ++I+ +C   R+
Sbjct: 246 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 305

Query: 566 EDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           +   ++ E M+SK        YN +I+  C    +E+  ++  ++       D  T   L
Sbjct: 306 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 365

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           ++   + G    A KV  +M +  + PD+     + + L   GK E+A
Sbjct: 366 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 413



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 134/270 (49%), Gaps = 5/270 (1%)

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD--GAKKFMQECLNKGCAVN 478
           ++ KL +A  +   MVK    P+  E N L+ ++ +  K D   +   + + +  G   +
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +V  +SL+ G+C    + +A++L+D M      PDT+T+TT+I  L  + +  EA  L+ 
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
           +M+ +G  P +VTY  V++  C+ G ++    LL KM +   +     +N +I++LC + 
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
           ++++A  +  ++     + +  T   L+    + G    A ++   M  + + P+L    
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQP 686
            + +  + EGK  EA+ L    ++R  I P
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRS-IDP 287


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 252/547 (46%), Gaps = 27/547 (4%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  +++ L + +  + A   LR    + I     +F+ +M  Y + G +  A      +
Sbjct: 202 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 261

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            K  + P++   N  I+ L +   +A+AL     M   G+ P+ +TYN L KG+  L  I
Sbjct: 262 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 321

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------ 316
             A ++I +M  KG SPD ++Y  ++   C+   I     L++ M++     +       
Sbjct: 322 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 381

Query: 317 -------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                   GRI+EA  L NQM   G  PD+V Y+ V++G C++G+ D A  +  +M    
Sbjct: 382 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 441

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PN+ ++ A L GLC  G  LEAR ++++      T + + Y++V+ G  + G + EA 
Sbjct: 442 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 501

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           ++ + +++ G  P+    N LI   C+   +  A+K +      G A +VV++T+L+  +
Sbjct: 502 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 561

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK---------- 539
              G+ +    L  +M      P  VTY+ I   L +  + E    ++ +          
Sbjct: 562 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 621

Query: 540 --MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSF 595
             M S+G+ P  +TY T+I   C+V  +      LE M S+        YN +I++LC +
Sbjct: 622 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 681

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
           GY+ +A   +  +              L++++  KG P +A K+  ++ +R     ++  
Sbjct: 682 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDY 741

Query: 656 KKVSERL 662
             V  RL
Sbjct: 742 SAVINRL 748



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 206/448 (45%), Gaps = 27/448 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++ +      +  GA  V+R M  +G+      ++ L+    + G +   + +L
Sbjct: 304 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL 363

Query: 200 SMMQKAAVAPNLLI-CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
             M       N +I C+  +  L    ++ +AL    +M+  G++P+++ Y+ +I G C 
Sbjct: 364 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 423

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
           L +   A+ L DEM  K   P+  ++  ++  LC++  + E R L++ +++         
Sbjct: 424 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 483

Query: 312 -NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            N+  D     G IEEA EL   + + G  P V T+ +++ G+C+   + +A+K+L  + 
Sbjct: 484 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 543

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
            +G  P+ VSYT  ++   + G +    E+    + E   P  +TYSV+  GL R  K  
Sbjct: 544 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK-H 602

Query: 427 EACDVV-------------REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           E C+ V             R+M  +G  P  +  N +IQ LCR   + GA  F++   ++
Sbjct: 603 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 662

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
               +   +  LI   C  G + +A S +  +           YTT+I A    G  E A
Sbjct: 663 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 722

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            +L  ++L +G   ++  Y  VI+R C+
Sbjct: 723 VKLFHQLLHRGFNVSIRDYSAVINRLCR 750



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 206/443 (46%), Gaps = 22/443 (4%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMAR--RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           ++LE L + +    A R+  L++   R  E     +  L+   SR   + +++Y+L  M+
Sbjct: 105 VILEQLLQEEGSGSASRLCELLSNSFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMK 164

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
              +  +    N+ ++     +K+    + ++         N  TY+ ++ G C   +++
Sbjct: 165 DQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK-------DKNEHTYSTVVDGLCRQQKLE 217

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL--------MEKMVNDSNLFH 315
           DA+  +     K   P  VS+ ++M   CK   +   +          +   V   N+  
Sbjct: 218 DAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILI 277

Query: 316 DQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           +     G I EA EL + M++ G  PD VTY  +  GF  +G +  A ++++ M   G  
Sbjct: 278 NGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLS 337

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY-SVVMHGLRREGKLSEACD 430
           P+ ++YT  L G C  G       ++       +  N+I   SV++ GL + G++ EA  
Sbjct: 338 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 397

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +  +M   G  P  V  +++I  LC+ GK D A     E  +K    N     +L+ G C
Sbjct: 398 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC 457

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           QKG L EA SLLD +    +  D V Y  +ID  +K+G +EEA EL   ++  G+ P+V 
Sbjct: 458 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVA 517

Query: 551 TYRTVIHRYCQVGRVEDLLKLLE 573
           T+ ++I+ YC+   + +  K+L+
Sbjct: 518 TFNSLIYGYCKTQNIAEARKILD 540



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           L  ++R KE++ ++E+++ +          E       +    G + D++ + +      
Sbjct: 94  LAGQRRFKELQVILEQLLQEEGSGSASRLCELLSNSFRKWESTGLVWDMLLFLS-----S 148

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           R+  +D +  +L++M       +T SY + L       K  +  + I    E        
Sbjct: 149 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH------- 201

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TYS V+ GL R+ KL +A   +R    K   P+ V  N ++   C+ G +D AK F    
Sbjct: 202 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 261

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           L  G   +V +   LI G C  G + EAL L  DM     +PD+VTY  +       G +
Sbjct: 262 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 321

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ---KCRTAYNQ 587
             A E++  ML KGL P V+TY  ++   CQ+G ++  L LL+ MLS+          + 
Sbjct: 322 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 381

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           ++  LC  G ++EA  +  ++       D     +++      G   +A  +   M ++ 
Sbjct: 382 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 441

Query: 648 LIPD--------LKLCKKVSERLILEGKS 668
           ++P+        L LC+K    ++LE +S
Sbjct: 442 ILPNSRTHGALLLGLCQK---GMLLEARS 467



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 138/319 (43%), Gaps = 24/319 (7%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L++   + G L  A  +L  +  +    ++++ N  I        + +AL   + +   G
Sbjct: 452 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 511

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           ITP+V T+N LI GYC    I +A K++D + L G +P  VSY T+M         K + 
Sbjct: 512 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 571

Query: 302 DLMEKM---------VNDSNLFHDQGR---------------IEEAKELVNQMSQMGCIP 337
           +L  +M         V  S +F    R                E+ K+ +  M   G  P
Sbjct: 572 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 631

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D +TY  ++   CRV  L  A   L+ M       ++ +Y   ++ LC  G   +A   I
Sbjct: 632 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 691

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
            + +E+  + +   Y+ ++     +G    A  +  +++ +GF  +  + + +I  LCR 
Sbjct: 692 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 751

Query: 458 GKMDGAKKFMQECLNKGCA 476
             ++ +K F    L++G +
Sbjct: 752 HLVNESKFFFCLMLSQGIS 770



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/317 (19%), Positives = 134/317 (42%), Gaps = 39/317 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D ++Y ++++  +K+   + A  + +++   GI      F+ L+  Y +   +  A  +L
Sbjct: 480 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 539

Query: 200 SMMQKAAVAPNLLICNTAIHVLV-VGNKLAKALRFLER-MQLAGITPNVLTYNCLIKGYC 257
            +++   +AP+++   T +      GN   K++  L R M+  GI P  +TY+ + KG C
Sbjct: 540 DVIKLYGLAPSVVSYTTLMDAYANCGN--TKSIDELRREMKAEGIPPTNVTYSVIFKGLC 597

Query: 258 DL-------HRIKDAI-----KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
                    H +++ I     + + +M  +G  PD+++Y T++ YLC+ K +      +E
Sbjct: 598 RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 657

Query: 306 KMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            M         + R  +A                 TY  +++  C  G + +A   +  +
Sbjct: 658 IM---------KSRNLDASS--------------ATYNILIDSLCVYGYIRKADSFIYSL 694

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
                  +  +YT  +   C  G    A ++ +      +  +   YS V++ L R   +
Sbjct: 695 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLV 754

Query: 426 SEACDVVREMVKKGFFP 442
           +E+      M+ +G  P
Sbjct: 755 NESKFFFCLMLSQGISP 771



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 4/189 (2%)

Query: 153 KTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
           + ++ +  K+ LR M   GI      ++ ++    R   L  A   L +M+   +  +  
Sbjct: 610 RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 669

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
             N  I  L V   + KA  F+  +Q   ++ +   Y  LIK +C     + A+KL  ++
Sbjct: 670 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 729

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE---EAKELVNQ 329
             +G +     Y  V+  LC+   + E +     M++   +  D    E   ++ EL++ 
Sbjct: 730 LHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLS-QGISPDLDICEVMIKSDELLSW 788

Query: 330 MSQMGCIPD 338
             + G +PD
Sbjct: 789 TIKWGLLPD 797


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/598 (24%), Positives = 270/598 (45%), Gaps = 56/598 (9%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQ 203
           M++E L ++K       + + M   G+  RP+   Y   M+A  + G L+ AM +   M+
Sbjct: 36  MIVESLVESKKFDNVLDLFKEMV--GLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMK 93

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           +  V PN+ + N  I  L    ++  A +    M +  + PN +T+N LI GYC    + 
Sbjct: 94  RRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVD 153

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK--------------MVN 309
            AI L + M  +   P  +++ +++  LCK +RI+E R ++ +              ++ 
Sbjct: 154 VAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIF 213

Query: 310 DSNLFHD----------------------------------QGRIEEAKELVNQMSQMGC 335
           D  L  D                                  +G++E+A+E++  + + G 
Sbjct: 214 DGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGL 273

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           +P  V Y  +VNG+C++G++D+A   ++QM   G +PN +++ + ++  C      +A E
Sbjct: 274 VPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEE 333

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
            +     +   P+  TY++++ G  R    S    ++ EM + G  P  +    LI  LC
Sbjct: 334 WVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLC 393

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           ++GK+  A+  +++ + +G   N   +  LI G C  G L EAL   D+M         V
Sbjct: 394 KDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIV 453

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY ++I  L K G+++EA E+   + S G  P V+TY ++I  Y   G  +  L+L E M
Sbjct: 454 TYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETM 513

Query: 576 --LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
             L  +     ++ +I   CS   ++    +  ++L+     D    + ++  Y   G  
Sbjct: 514 KKLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHV 572

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
             A+ +   M +  + PD K    +    + EGK  E   L+     +G I P+++ +
Sbjct: 573 QKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLI-PEADTY 629



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 158/646 (24%), Positives = 288/646 (44%), Gaps = 53/646 (8%)

Query: 64  RRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQI---------CAV 114
           RR V+      + L+  +C+   +R A   KL GE+   +R+L P ++         C  
Sbjct: 94  RRKVVPNVFVYNVLIGGLCKEKRIRDA--EKLFGEMS--VRNLVPNRVTFNTLIDGYCKA 149

Query: 115 LRSQADERVALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGI 172
              + D  + L+     +R  + + +P  I +  +L  L K +  + A+ +L  +   G 
Sbjct: 150 --GEVDVAIGLR-----ERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGF 202

Query: 173 ECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA---AVAPNLLICNTAIHVLVVGNKLAK 229
              P+ F+Y ++          A   L + ++A    V  +   C+  ++ L    K+ K
Sbjct: 203 --VPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEK 260

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A   L+ +   G+ P  + YN ++ GYC +  +  AI  I++M  +G  P+ +++ +V+ 
Sbjct: 261 AEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVID 320

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
             C+ + I                       ++A+E V +M   G  P V TY  +++G+
Sbjct: 321 KFCEMQMI-----------------------DKAEEWVKKMVGKGIAPSVETYNILIDGY 357

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
            R+    +  ++L++M  +G KPN +SY + +N LC +GK LEA  ++         PNA
Sbjct: 358 GRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNA 417

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
             Y++++ G    GKL EA     EM K G   T V  N LI+ LC+ GK+  A++    
Sbjct: 418 NIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFL 477

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
             + G   +V+ + SLI G+   G+ ++ L L + M      P   T+  +I   SK G 
Sbjct: 478 ITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG- 536

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQ 587
           ++    L  +ML   L P  V Y  +IH Y + G V+    L ++M  +  +     YN 
Sbjct: 537 IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNS 596

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I      G L E   ++  +       +A T  +L++ + +      AY     M    
Sbjct: 597 LILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENG 656

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQ 693
            +P++ +C ++S  L  +G+ +EA ++    +  G     + E L 
Sbjct: 657 FLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGMDNLDTNEDLS 702



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 228/485 (47%), Gaps = 26/485 (5%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M++    P+       +  LV   K    L   + M   G  P+ L Y   +     L  
Sbjct: 22  MRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGD 81

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +K A++L + M  +   P+   Y  ++G LCKEKRI+                       
Sbjct: 82  LKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIR----------------------- 118

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +A++L  +MS    +P+ VT+  +++G+C+ GE+D A  + ++M     +P+ +++ + L
Sbjct: 119 DAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLL 178

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG-LRREGKLSEACDVVREMVKKGF 440
           +GLC   +  EAR M+N  +   + P+  TYS++  G L+ +     A D+ RE + KG 
Sbjct: 179 SGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGV 238

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
                  ++L+  LC+EGK++ A++ ++  +  G     V + +++ G+CQ GD++ A+ 
Sbjct: 239 KIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAIL 298

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
            ++ M      P+ + + ++ID   +   +++A E + KM+ KG+ P+V TY  +I  Y 
Sbjct: 299 TIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYG 358

Query: 561 QVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           ++       ++LE+M    ++    +Y  +I  LC  G + EA  +L  ++      +A+
Sbjct: 359 RLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNAN 418

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
             ++L++     G    A +    M    +   +     + + L   GK +EA+ +    
Sbjct: 419 IYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLI 478

Query: 679 VERGH 683
              GH
Sbjct: 479 TSTGH 483



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 171/400 (42%), Gaps = 40/400 (10%)

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +  EL + M Q G +P       +V       + D    + ++M   G +P+ + Y   +
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
                 G    A E+  T +     PN   Y+V++ GL +E ++ +A  +  EM  +   
Sbjct: 74  LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N LI   C+ G++D A    +    +    +++ F SL+ G C+   +EEA  +
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193

Query: 502 LDDMYLCKKDPDTVTYTTIID------------------------------------ALS 525
           L+++      PD  TY+ I D                                     L 
Sbjct: 194 LNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLC 253

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS---KQKCR 582
           K G+VE+A E++  ++  GLVP  V Y T+++ YCQ+G ++  +  +E+M S   +  C 
Sbjct: 254 KEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNC- 312

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
            A+N VI+  C    +++A + + K++         T ++L++ Y    +    +++   
Sbjct: 313 IAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEE 372

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           M      P++     +   L  +GK  EA+ ++   V RG
Sbjct: 373 MEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRG 412



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 124/268 (46%), Gaps = 14/268 (5%)

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           ++SE  D +R+   +G  P+   + ++++SL    K D      +E +  G   + + + 
Sbjct: 14  QVSELYDFMRQ---EGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYG 70

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
             +    + GDL+ A+ L + M   K  P+   Y  +I  L K  R+ +A +L  +M  +
Sbjct: 71  RAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVR 130

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEE 600
            LVP  VT+ T+I  YC+ G V+  + L E+M  K+K   +   +N ++  LC    +EE
Sbjct: 131 NLVPNRVTFNTLIDGYCKAGEVDVAIGLRERM-KKEKVEPSIITFNSLLSGLCKARRIEE 189

Query: 601 AGKILGKVLRTASKADASTCHVLVESYL----NKGIPLLAYKVACRMFNRNLIPDLKLCK 656
           A  +L ++       D  T  ++ +  L      G  L  Y+ A     + +  D   C 
Sbjct: 190 ARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREA---IGKGVKIDNYTCS 246

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHI 684
            +   L  EGK E+A+ ++   VE G +
Sbjct: 247 ILLNGLCKEGKVEKAEEVLKSLVEHGLV 274


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 252/547 (46%), Gaps = 27/547 (4%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  +++ L + +  + A   LR    + I     +F+ +M  Y + G +  A      +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            K  + P++   N  I+ L +   +A+AL     M   G+ P+ +TYN L KG+  L  I
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------ 316
             A ++I +M  KG SPD ++Y  ++   C+   I     L++ M++     +       
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368

Query: 317 -------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                   GRI+EA  L NQM   G  PD+V Y+ V++G C++G+ D A  +  +M    
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PN+ ++ A L GLC  G  LEAR ++++      T + + Y++V+ G  + G + EA 
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           ++ + +++ G  P+    N LI   C+   +  A+K +      G A +VV++T+L+  +
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK---------- 539
              G+ +    L  +M      P  VTY+ I   L +  + E    ++ +          
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 608

Query: 540 --MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSF 595
             M S+G+ P  +TY T+I   C+V  +      LE M S+        YN +I++LC +
Sbjct: 609 RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY 668

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
           GY+ +A   +  +              L++++  KG P +A K+  ++ +R     ++  
Sbjct: 669 GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDY 728

Query: 656 KKVSERL 662
             V  RL
Sbjct: 729 SAVINRL 735



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 224/489 (45%), Gaps = 26/489 (5%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR 162
           LR +   +I   L S++ + +++ FF      + +RH      ++  +L+  +  +  + 
Sbjct: 47  LRHVHVEEIMDELMSESSD-LSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQV 105

Query: 163 VLRLMAR-----RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           +L  + +     R  E     +  L+   SR   + +++Y+L  M+   +  +    N+ 
Sbjct: 106 ILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSV 165

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           ++     +K+    + ++         N  TY+ ++ G C   +++DA+  +     K  
Sbjct: 166 LYHFRETDKMWDVYKEIK-------DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDI 218

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDL--------MEKMVNDSNLFHDQ----GRIEEAKE 325
            P  VS+ ++M   CK   +   +          +   V   N+  +     G I EA E
Sbjct: 219 GPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALE 278

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L + M++ G  PD VTY  +  GF  +G +  A ++++ M   G  P+ ++YT  L G C
Sbjct: 279 LASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQC 338

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITY-SVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             G       ++       +  N+I   SV++ GL + G++ EA  +  +M   G  P  
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 398

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  +++I  LC+ GK D A     E  +K    N     +L+ G CQKG L EA SLLD 
Sbjct: 399 VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           +    +  D V Y  +ID  +K+G +EEA EL   ++  G+ P+V T+ ++I+ YC+   
Sbjct: 459 LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 518

Query: 565 VEDLLKLLE 573
           + +  K+L+
Sbjct: 519 IAEARKILD 527



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 206/448 (45%), Gaps = 27/448 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++ +      +  GA  V+R M  +G+      ++ L+    + G +   + +L
Sbjct: 291 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL 350

Query: 200 SMMQKAAVAPNLLI-CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
             M       N +I C+  +  L    ++ +AL    +M+  G++P+++ Y+ +I G C 
Sbjct: 351 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
           L +   A+ L DEM  K   P+  ++  ++  LC++  + E R L++ +++         
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470

Query: 312 -NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            N+  D     G IEEA EL   + + G  P V T+ +++ G+C+   + +A+K+L  + 
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
            +G  P+ VSYT  ++   + G +    E+    + E   P  +TYSV+  GL R  K  
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK-H 589

Query: 427 EACDVV-------------REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           E C+ V             R+M  +G  P  +  N +IQ LCR   + GA  F++   ++
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
               +   +  LI   C  G + +A S +  +           YTT+I A    G  E A
Sbjct: 650 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            +L  ++L +G   ++  Y  VI+R C+
Sbjct: 710 VKLFHQLLHRGFNVSIRDYSAVINRLCR 737



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 172/395 (43%), Gaps = 28/395 (7%)

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           L  ++R KE++ ++E+++ +   F              +    G + D++ + +      
Sbjct: 94  LAGQRRFKELQVILEQLLQEEGTF-------------RKWESTGLVWDMLLFLS-----S 135

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           R+  +D +  +L++M       +T SY + L       K  +  + I    E        
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH------- 188

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TYS V+ GL R+ KL +A   +R    K   P+ V  N ++   C+ G +D AK F    
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           L  G   +V +   LI G C  G + EAL L  DM     +PD+VTY  +       G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ---KCRTAYNQ 587
             A E++  ML KGL P V+TY  ++   CQ+G ++  L LL+ MLS+          + 
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           ++  LC  G ++EA  +  ++       D     +++      G   +A  +   M ++ 
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++P+ +    +   L  +G   EA +L+   +  G
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/283 (20%), Positives = 131/283 (46%), Gaps = 11/283 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ ++  Y+++G +  A+ +  ++ +  + P++   N+ I+       +A+A + L+ ++
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
           L G+ P+V++Y  L+  Y +    K   +L  EM  +G  P  V+Y  +   LC+  + +
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
               ++ + +            E+ K+ +  M   G  PD +TY  ++   CRV  L  A
Sbjct: 591 NCNHVLRERI-----------FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
              L+ M       ++ +Y   ++ LC  G   +A   I + +E+  + +   Y+ ++  
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
              +G    A  +  +++ +GF  +  + + +I  LCR   M+
Sbjct: 700 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 246/518 (47%), Gaps = 31/518 (5%)

Query: 160 AKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A+     MAR     RP+  +F  L++   R G+   A  +L+ M       +   C   
Sbjct: 163 AREAFDGMARAAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVV 222

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +       +         RM   G  PN++ Y+  I G C+   +K A  +++EM  KG 
Sbjct: 223 VRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGL 282

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-------------FHDQGRIEEAK 324
            P+  ++ +++  LCK   ++    L  K+V  S+              +  +G++  A+
Sbjct: 283 KPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAE 342

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L+ +M + G  P+  TYT +++G C+ G  D+A +++ +M   G  PN  +Y A + G 
Sbjct: 343 MLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGF 402

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  GK  EA +++  +  +    + +TY++++    ++G ++ A D+ ++M +K   P  
Sbjct: 403 CKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDI 462

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
                +I   C++ +M+ +++   +CL+ G       +TS+I G+C+ G L  AL + + 
Sbjct: 463 HTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFER 522

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      PD++TY  +I +L K  R+EEA  L   ML K LVP  VT  T+ + YC+  +
Sbjct: 523 MVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDK 582

Query: 565 VEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           +   +  L+++  +Q+  TA + ++  L + G L+ A   L  VL      D    H   
Sbjct: 583 ITIAVSFLDRLDKRQQAHTA-DALVRKLSTVGNLDAASLFLKNVLDKHYAVD----HATY 637

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
            S++N          +C   NR  +   ++ +K+S+R+
Sbjct: 638 TSFIN----------SCYESNRYALAS-EISEKISKRI 664



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 219/507 (43%), Gaps = 71/507 (14%)

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK----LAKALRFLERMQLA--GI 242
           AG+LR A  +L  ++   +    L+  TA  VL VG +     A A    + M  A  G+
Sbjct: 121 AGRLREAADMLLELRSHGLP---LVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGV 177

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
            P+  ++  L+ G C   R ++A  L+  M  +G   D  +   V+   C++ R + V D
Sbjct: 178 RPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTD 237

Query: 303 LMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
           L  +M                       S+MG  P++V Y+A ++G C  G + QA  +L
Sbjct: 238 LFRRM-----------------------SEMGTPPNMVNYSAWIDGLCERGYVKQAFHVL 274

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA-REMINTSEEEWWTPNAITYSVVMHGLRR 421
           ++M   G KPN  ++T+ ++GLC  G    A R  +   +   + PN  TY+V++ G  +
Sbjct: 275 EEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCK 334

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           EGKL+ A  ++  MV++G  P       LI   C+ G  D A + M +   +G   N+  
Sbjct: 335 EGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYT 394

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           + ++I GFC+KG ++EA  +L          D VTYT +I    K G +  A +L  +M 
Sbjct: 395 YNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMA 454

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLE 599
            K   P + TY T+I  YCQ  ++E   +L +K LS     T   Y  +I   C  G L 
Sbjct: 455 EKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLT 514

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
            A K+                                     RM     +PD      + 
Sbjct: 515 SALKVFE-----------------------------------RMVQHGCLPDSITYGALI 539

Query: 660 ERLILEGKSEEADTLMLRFVERGHIQP 686
             L  E + EEA  L    +++ H+ P
Sbjct: 540 SSLCKESRLEEARALFETMLDK-HLVP 565



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 160/346 (46%), Gaps = 12/346 (3%)

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVV-TYTAVVN-GFCRVGELDQAKKMLQQMYHH--GCK 371
           + GR+ EA +++ ++   G +P VV T   V+  G    G    A++    M     G +
Sbjct: 120 EAGRLREAADMLLELRSHG-LPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVR 178

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+  S+ A + G C  G+  EA  ++     + +  ++ T +VV+    R+G+     D+
Sbjct: 179 PDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDL 238

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
            R M + G  P  V  +  I  LC  G +  A   ++E + KG   NV   TSLI G C+
Sbjct: 239 FRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCK 298

Query: 492 KGDLEEALSLLDDMYLCKKD---PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            G +E A  L   + L K     P+  TYT +I    K G++  A  L+ +M+ +GL P 
Sbjct: 299 IGWMERAFRLF--LKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPN 356

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILG 606
             TY T+IH +C+ G  +   +L+ KM  +        YN +I   C  G ++EA K+L 
Sbjct: 357 TNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLR 416

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
                    D  T  +L+  +  +G    A  +  +M  ++  PD+
Sbjct: 417 MATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDI 462



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 110/234 (47%), Gaps = 9/234 (3%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           Q A +VLR+   +G+      ++ L+  + + G +  A+ +   M + +  P++    T 
Sbjct: 409 QEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTI 468

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I +     ++ ++ +  ++    G+ P   TY  +I GYC L ++  A+K+ + M   GC
Sbjct: 469 IAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGC 528

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKEL---------VN 328
            PD ++Y  ++  LCKE R++E R L E M++   +  D  R+  A E          V+
Sbjct: 529 LPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVS 588

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
            + ++       T  A+V     VG LD A   L+ +       +  +YT+F+N
Sbjct: 589 FLDRLDKRQQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFIN 642


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 216/453 (47%), Gaps = 14/453 (3%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNA 195
           + D   Y ++L+ L   K  Q A  +L +MA     C  +  +Y  V     R G+L  A
Sbjct: 167 KPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKA 226

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +   M     +P+++  ++ I  L     + KA +   RM   G+ P+ + Y  L+ G
Sbjct: 227 YSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHG 286

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----D 310
           YC   + K+AI +  +M   G  PD V+Y  +M YLCK  +  E R + + +V      D
Sbjct: 287 YCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPD 346

Query: 311 SN----LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
           S     L H    +G + E  +L++ M + G       +  ++  + +  ++D+A  +  
Sbjct: 347 STTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFS 406

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M   G  P+ V+Y   L+ LC  G+  +A    N+ + E   PN + ++ ++HGL    
Sbjct: 407 NMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCD 466

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           K  +  ++  EM+ +G     +  N ++ +LC++G++  AK      +  G   N   + 
Sbjct: 467 KWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYN 526

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           +LI G+C  G ++EA+ LL  M      P  VTY TII+  S+NGR+E+   L+ +M  K
Sbjct: 527 TLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGK 586

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           G+ P +VTY  ++    Q GR     +L  +M+
Sbjct: 587 GVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 619



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 134/546 (24%), Positives = 252/546 (46%), Gaps = 65/546 (11%)

Query: 195 AMYVLSMMQKA---AVAPNLLICNTAIHVLVVG-----NKLAKALRFLERMQLAGITPNV 246
           A+ + + M +A   + APN+     A + +V+G      +L  A   + R+   G+  + 
Sbjct: 80  AISLFNRMPRAGATSAAPNI-----ATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSP 134

Query: 247 LTYNCLIKGYCDLHRIKDAIKLI-DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           + ++ L+KG CD  R  DA+ ++   MP  GC PD  SY  ++  LC +K  ++  DL+ 
Sbjct: 135 ILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLH 194

Query: 306 KMVNDS--------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVT---------- 341
            M +                N    +G++++A  L + M   G  PDVVT          
Sbjct: 195 IMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSK 254

Query: 342 -------------------------YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
                                    YT++V+G+C  G+  +A  + ++M  HG +P+ V+
Sbjct: 255 TQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVT 314

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YTA ++ LC NGKS EAR++ ++  +    P++ TY  ++HG   EG L E  D++  M+
Sbjct: 315 YTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMM 374

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           KKG        N+++ +  +  K+D A         +G   ++VN+ +++   C  G ++
Sbjct: 375 KKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVD 434

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +ALS  + +      P+ V +TT+I  L    + ++  EL  +M+ +G+    + +  ++
Sbjct: 435 DALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIM 494

Query: 557 HRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
              C+ GRV +   L + M  +  +     YN +I+  C  G ++EA K+LG ++    K
Sbjct: 495 GNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVK 554

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
               T + ++  Y   G       +   M  + + P +   + + + L   G++  A  L
Sbjct: 555 PSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 614

Query: 675 MLRFVE 680
            LR ++
Sbjct: 615 YLRMIK 620



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 202/444 (45%), Gaps = 16/444 (3%)

Query: 114 VLRSQADERVALQ----FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR 169
           +L+   D++ + Q        AD + R   D + Y  ++  L +      A  +   M  
Sbjct: 176 LLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLD 235

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           RG       +S ++ A S+   +  A  V + M K  V P+ ++  + +H      K  +
Sbjct: 236 RGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKE 295

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A+   ++M   G+ P+V+TY  L+   C   +  +A K+ D +  +G  PD  +Y T++ 
Sbjct: 296 AIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLH 355

Query: 290 YLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIP 337
               E  + E+ DL++ M+                 +    +++EA  + + M Q G  P
Sbjct: 356 GYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNP 415

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D+V Y  V++  C  G +D A      +   G  PN V +T  ++GLC   K  +  E+ 
Sbjct: 416 DIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELA 475

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
               +     + I ++ +M  L ++G++ EA ++   MV+ G  P     N LI   C +
Sbjct: 476 FEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLD 535

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           GKMD A K +   +  G   + V + ++I G+ Q G +E+ L+LL +M     +P  VTY
Sbjct: 536 GKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTY 595

Query: 518 TTIIDALSKNGRVEEATELMMKML 541
             ++  L + GR   A EL ++M+
Sbjct: 596 EMLLQGLFQAGRTVAAKELYLRMI 619



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 138/275 (50%), Gaps = 23/275 (8%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           +L LM ++G++     F+ +M AY++  K+  A+ V S M++  + P+++   T + +L 
Sbjct: 369 LLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILC 428

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              ++  AL     ++  G+ PN++ +  LI G C   +     +L  EM  +G   D +
Sbjct: 429 TAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTI 488

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
            +  +MG LCK                       +GR+ EAK L + M ++G  P+  TY
Sbjct: 489 FFNAIMGNLCK-----------------------KGRVIEAKNLFDLMVRIGIEPNTNTY 525

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             +++G+C  G++D+A K+L  M  +G KP+ V+Y   +NG   NG+  +   ++   + 
Sbjct: 526 NTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDG 585

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +   P  +TY +++ GL + G+   A ++   M+K
Sbjct: 586 KGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 37/288 (12%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC-REGKMDGAKK 465
           PN  TY +V+   RR G+L  A   V  ++  G   +P+  + L++ LC R    D    
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDI 156

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK--DPDTVTYTTIIDA 523
            ++     GC  ++ ++T L++G C     ++AL LL  M   K     D V YTT+I+ 
Sbjct: 157 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 216

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
           L + G++++A  L   ML +G  P VVTY ++I                   LSK +   
Sbjct: 217 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSII-----------------SALSKTQA-- 257

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
                         +++A ++  ++++     D      LV  Y + G P  A  +  +M
Sbjct: 258 --------------MDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKM 303

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
               + PD+     + + L   GKS EA  +    V+RGH +P S  +
Sbjct: 304 CRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH-KPDSTTY 350


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 252/546 (46%), Gaps = 27/546 (4%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y  +++ L + +  + A   LR    + I     +F+ +M  Y + G +  A      + 
Sbjct: 232 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 291

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           K  + P++   N  I+ L +   +A+AL     M   G+ P+ +TYN L KG+  L  I 
Sbjct: 292 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 351

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------- 316
            A ++I +M  KG SPD ++Y  ++   C+   I     L++ M++     +        
Sbjct: 352 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 411

Query: 317 ------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                  GRI+EA  L NQM   G  PD+V Y+ V++G C++G+ D A  +  +M     
Sbjct: 412 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 471

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PN+ ++ A L GLC  G  LEAR ++++      T + + Y++V+ G  + G + EA +
Sbjct: 472 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 531

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           + + +++ G  P+    N LI   C+   +  A+K +      G A +VV++T+L+  + 
Sbjct: 532 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 591

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK----------- 539
             G+ +    L  +M      P  VTY+ I   L +  + E    ++ +           
Sbjct: 592 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 651

Query: 540 -MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFG 596
            M S+G+ P  +TY T+I   C+V  +      LE M S+        YN +I++LC +G
Sbjct: 652 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 711

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
           Y+ +A   +  +              L++++  KG P +A K+  ++ +R     ++   
Sbjct: 712 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 771

Query: 657 KVSERL 662
            V  RL
Sbjct: 772 AVINRL 777



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 206/448 (45%), Gaps = 27/448 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++ +      +  GA  V+R M  +G+      ++ L+    + G +   + +L
Sbjct: 333 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL 392

Query: 200 SMMQKAAVAPNLLI-CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
             M       N +I C+  +  L    ++ +AL    +M+  G++P+++ Y+ +I G C 
Sbjct: 393 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 452

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
           L +   A+ L DEM  K   P+  ++  ++  LC++  + E R L++ +++         
Sbjct: 453 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 512

Query: 312 -NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            N+  D     G IEEA EL   + + G  P V T+ +++ G+C+   + +A+K+L  + 
Sbjct: 513 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 572

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
            +G  P+ VSYT  ++   + G +    E+    + E   P  +TYSV+  GL R  K  
Sbjct: 573 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK-H 631

Query: 427 EACDVV-------------REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           E C+ V             R+M  +G  P  +  N +IQ LCR   + GA  F++   ++
Sbjct: 632 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 691

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
               +   +  LI   C  G + +A S +  +           YTT+I A    G  E A
Sbjct: 692 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 751

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            +L  ++L +G   ++  Y  VI+R C+
Sbjct: 752 VKLFHQLLHRGFNVSIRDYSAVINRLCR 779



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/497 (24%), Positives = 227/497 (45%), Gaps = 34/497 (6%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR 162
           LR +   +I   L S++ + +++ FF      + +RH      ++  +L+  +  +  + 
Sbjct: 81  LRHVHVEEIMDELMSESSD-LSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQV 139

Query: 163 VL-RLMARRGIECRPEAFSY------------LMVAYSRAGKLRNAMYVLSMMQKAAVAP 209
           +L +L+   G  C   + S+            L+   SR   + +++Y+L  M+   +  
Sbjct: 140 ILEQLLQEEGTLCELLSNSFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNV 199

Query: 210 NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
           +    N+ ++     +K+    + ++         N  TY+ ++ G C   +++DA+  +
Sbjct: 200 STQSYNSVLYHFRETDKMWDVYKEIK-------DKNEHTYSTVVDGLCRQQKLEDAVLFL 252

Query: 270 DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL--------MEKMVNDSNLFHDQ---- 317
                K   P  VS+ ++M   CK   +   +          +   V   N+  +     
Sbjct: 253 RTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLV 312

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G I EA EL + M++ G  PD VTY  +  GF  +G +  A ++++ M   G  P+ ++Y
Sbjct: 313 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 372

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY-SVVMHGLRREGKLSEACDVVREMV 436
           T  L G C  G       ++       +  N+I   SV++ GL + G++ EA  +  +M 
Sbjct: 373 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 432

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
             G  P  V  +++I  LC+ GK D A     E  +K    N     +L+ G CQKG L 
Sbjct: 433 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 492

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           EA SLLD +    +  D V Y  +ID  +K+G +EEA EL   ++  G+ P+V T+ ++I
Sbjct: 493 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 552

Query: 557 HRYCQVGRVEDLLKLLE 573
           + YC+   + +  K+L+
Sbjct: 553 YGYCKTQNIAEARKILD 569



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 173/390 (44%), Gaps = 33/390 (8%)

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRI-EEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
           L  ++R KE++ ++E+      L  ++G + E       +    G + D++ + +     
Sbjct: 128 LAGQRRFKELQVILEQ------LLQEEGTLCELLSNSFRKWESTGLVWDMLLFLS----- 176

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
            R+  +D +  +L++M       +T SY + L       K  +  + I    E       
Sbjct: 177 SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH------ 230

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            TYS V+ GL R+ KL +A   +R    K   P+ V  N ++   C+ G +D AK F   
Sbjct: 231 -TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 289

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            L  G   +V +   LI G C  G + EAL L  DM     +PD+VTY  +       G 
Sbjct: 290 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 349

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ---KCRTAYN 586
           +  A E++  ML KGL P V+TY  ++   CQ+G ++  L LL+ MLS+          +
Sbjct: 350 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 409

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            ++  LC  G ++EA  +  ++       D     +++      G   +A  +   M ++
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469

Query: 647 NLIPD--------LKLCKKVSERLILEGKS 668
            ++P+        L LC+K    ++LE +S
Sbjct: 470 RILPNSRTHGALLLGLCQK---GMLLEARS 496



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 138/319 (43%), Gaps = 24/319 (7%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L++   + G L  A  +L  +  +    ++++ N  I        + +AL   + +   G
Sbjct: 481 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 540

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           ITP+V T+N LI GYC    I +A K++D + L G +P  VSY T+M         K + 
Sbjct: 541 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 600

Query: 302 DLMEKM---------VNDSNLFHDQGR---------------IEEAKELVNQMSQMGCIP 337
           +L  +M         V  S +F    R                E+ K+ +  M   G  P
Sbjct: 601 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 660

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D +TY  ++   CRV  L  A   L+ M       ++ +Y   ++ LC  G   +A   I
Sbjct: 661 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 720

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
            + +E+  + +   Y+ ++     +G    A  +  +++ +GF  +  + + +I  LCR 
Sbjct: 721 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 780

Query: 458 GKMDGAKKFMQECLNKGCA 476
             ++ +K F    L++G +
Sbjct: 781 HLVNESKFFFCLMLSQGIS 799



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/317 (19%), Positives = 134/317 (42%), Gaps = 39/317 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D ++Y ++++  +K+   + A  + +++   GI      F+ L+  Y +   +  A  +L
Sbjct: 509 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 568

Query: 200 SMMQKAAVAPNLLICNTAIHVLV-VGNKLAKALRFLER-MQLAGITPNVLTYNCLIKGYC 257
            +++   +AP+++   T +      GN   K++  L R M+  GI P  +TY+ + KG C
Sbjct: 569 DVIKLYGLAPSVVSYTTLMDAYANCGN--TKSIDELRREMKAEGIPPTNVTYSVIFKGLC 626

Query: 258 DL-------HRIKDAI-----KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
                    H +++ I     + + +M  +G  PD+++Y T++ YLC+ K +      +E
Sbjct: 627 RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 686

Query: 306 KMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            M         + R  +A                 TY  +++  C  G + +A   +  +
Sbjct: 687 IM---------KSRNLDASS--------------ATYNILIDSLCVYGYIRKADSFIYSL 723

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
                  +  +YT  +   C  G    A ++ +      +  +   YS V++ L R   +
Sbjct: 724 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLV 783

Query: 426 SEACDVVREMVKKGFFP 442
           +E+      M+ +G  P
Sbjct: 784 NESKFFFCLMLSQGISP 800



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 4/189 (2%)

Query: 153 KTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
           + ++ +  K+ LR M   GI      ++ ++    R   L  A   L +M+   +  +  
Sbjct: 639 RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 698

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
             N  I  L V   + KA  F+  +Q   ++ +   Y  LIK +C     + A+KL  ++
Sbjct: 699 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 758

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE---EAKELVNQ 329
             +G +     Y  V+  LC+   + E +     M++   +  D    E   ++ EL++ 
Sbjct: 759 LHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQ-GISPDLDICEVMIKSDELLSW 817

Query: 330 MSQMGCIPD 338
             + G +PD
Sbjct: 818 TIKWGLLPD 826


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 208/422 (49%), Gaps = 26/422 (6%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH-VLVVGNKLAKALRFLER 236
            F  L++AY+ +  + +A+  L +++K   +  +  C+  +  V+ +  +      F   
Sbjct: 157 VFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLE 216

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           +   G  PNV  +N L+ G+C +  + +A  + DE+  +G  P  VS+ T++   C+ K 
Sbjct: 217 VLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKN 276

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
           +                       EE   L + M      PDV TY+A++NG C+   ++
Sbjct: 277 V-----------------------EEGFVLKSVMESERISPDVFTYSALINGLCKESRVE 313

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A  +  +M   G  PN V++T  ++G C +GK   A       ++    P+ ITY+ ++
Sbjct: 314 EANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALI 373

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
           +GL R+G L EA  ++ EM+  GF P  +    L+   C++G MD A +     + +G  
Sbjct: 374 NGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIE 433

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
           ++ V FT+LI G C+ G + +A  +L DM      PD  TYT +ID   K G V+   +L
Sbjct: 434 LDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKL 493

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCS 594
           + +M   G VP VVTY  +++ +C+ G++++   LL  ML+ +       +N +++  C 
Sbjct: 494 LKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCK 553

Query: 595 FG 596
            G
Sbjct: 554 HG 555



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/512 (23%), Positives = 235/512 (45%), Gaps = 52/512 (10%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS+     SR    R+ ++  S M     + NLL    ++ + ++ +K+           
Sbjct: 83  FSFFNYLASRP-PFRHTLHNYSTMAHFLSSHNLLSQTHSLFLFII-SKMGHHSSTSLISS 140

Query: 239 LAGITP-------NVLTYNCLIKGYCDLHRIKDAIKLID-------EMPLKGCSPDKVSY 284
           L    P       +VL ++ LI  Y D   I+DAI+ +         +P+ GC       
Sbjct: 141 LIQTVPTHHRHNHSVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCD------ 194

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
                YL     ++ V  L ++                  E   ++   G  P+V  +  
Sbjct: 195 -----YL-----LRRVMKLNQQP-------------GHCWEFYLEVLDYGYPPNVYLFNI 231

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++GFC++G++  A+ +  ++   G +P+ VS+   ++G C +    E   + +  E E 
Sbjct: 232 LMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESER 291

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
            +P+  TYS +++GL +E ++ EA  +  EM + G  P  V    LI   C+ GK+D A 
Sbjct: 292 ISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLAL 351

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           +  +   ++G   +++ + +LI G C+ GDL+EA  LL++M      PD +T+TT++D  
Sbjct: 352 RNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGC 411

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS--KQKCR 582
            K+G ++ A E+  +M+ +G+    V +  +I   C+ GRV D  ++L+ MLS   +   
Sbjct: 412 CKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDD 471

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             Y  VI+  C  G ++   K+L ++ R        T + L+  +  +G    A  +   
Sbjct: 472 PTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHA 531

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
           M N  ++P+      ++  ++L+G  +   ++
Sbjct: 532 MLNMEVVPN-----DITFNILLDGHCKHGSSV 558



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 179/371 (48%), Gaps = 15/371 (4%)

Query: 128 FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS 187
           FY     + Y  +  ++ +++    K      A+ V   ++RRG+     +F+ L+  Y 
Sbjct: 213 FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYC 272

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R+  +     + S+M+   ++P++   +  I+ L   +++ +A    + M   G+ PN +
Sbjct: 273 RSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV 332

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           T+  LI G C   +I  A++  + M  +G  PD ++Y  ++  LC++  +KE R L+ +M
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM 392

Query: 308 VN-----DSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           +      D   F          G ++ A E+ ++M + G   D V +TA+++G CR G +
Sbjct: 393 IGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRV 452

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
             A++ML+ M   G KP+  +YT  ++  C  G      +++   + +   P  +TY+ +
Sbjct: 453 RDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNAL 512

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           M+G  ++G++  A  ++  M+     P  +  N+L+   C+ G     K F  E   KG 
Sbjct: 513 MNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGE---KGL 569

Query: 476 AVNVVNFTSLI 486
             +  ++T+L+
Sbjct: 570 VSDYASYTALV 580



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 6/271 (2%)

Query: 419 LRREGKLSE----ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           LRR  KL++      +   E++  G+ P     N+L+   C+ G +  A+    E   +G
Sbjct: 197 LRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRG 256

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              +VV+F +LI G+C+  ++EE   L   M   +  PD  TY+ +I+ L K  RVEEA 
Sbjct: 257 LRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEAN 316

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
            L  +M   GLVP  VT+ T+I   C+ G+++  L+  E M  +  +     YN +I  L
Sbjct: 317 GLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGL 376

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G L+EA K+L +++    K D  T   L++     G    A ++  RM    +  D 
Sbjct: 377 CRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDD 436

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERGH 683
                +   L  +G+  +A+ ++   +  GH
Sbjct: 437 VAFTALISGLCRDGRVRDAERMLKDMLSAGH 467



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 106/256 (41%), Gaps = 49/256 (19%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A R   +M  RGI  RP+  +Y  L+    R G L+ A  +L+ M      P+ +   T 
Sbjct: 350 ALRNFEIMKDRGI--RPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTL 407

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +        +  AL   +RM   GI  + + +  LI G C   R++DA +++ +M   G 
Sbjct: 408 MDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGH 467

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
            PD  +Y  V+   CK+  +K    L+++M  D             N F  QG+++ AK 
Sbjct: 468 KPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKM 527

Query: 326 LVNQMSQMGCIP--------------------------------DVVTYTAVVNGFCRVG 353
           L++ M  M  +P                                D  +YTA+VN   ++ 
Sbjct: 528 LLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGEKGLVSDYASYTALVNESIKIS 587

Query: 354 ELDQAKKMLQQMYHHG 369
           + DQ K +L+   H G
Sbjct: 588 K-DQLKSVLECPTHIG 602


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 205/384 (53%), Gaps = 6/384 (1%)

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           RG      ++  L+    + G+ R A+ VL  +    V  N+++ +T I  L     + +
Sbjct: 147 RGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTE 206

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A     +M +  ++P+V+T++ LI G+C + + K+A  L  EM L   +PD  ++  ++ 
Sbjct: 207 AYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVD 266

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            LCKE   KE ++++  M+ + N      ++ +AK + N + +    PDV +YT ++   
Sbjct: 267 ALCKEGSTKETKNVLAVMMKEVN------QVNKAKHVFNIIGKRRVTPDVHSYTIIIKRL 320

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C++  +D+A  +  +M   G  P+ V+Y++ ++GLC + +   A E+++         + 
Sbjct: 321 CKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADV 380

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           ITY+  +H L +  ++ +A  +V+++  +G  P     N+LI  LC+EG+ + A+   Q+
Sbjct: 381 ITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQD 440

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            L KG  V V  +  +I G C +G  +EA++LL+ M      PD VTY TII AL KN  
Sbjct: 441 LLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDE 500

Query: 530 VEEATELMMKMLSKGLVPTVVTYR 553
             +A +L+ +M+++GL+   V  R
Sbjct: 501 NHKAEKLLREMIARGLLEEKVEIR 524



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 240/519 (46%), Gaps = 44/519 (8%)

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK--LAKALRFLERMQLAGITPNVLTY 249
           + +A+     M +   +P+++  N  +  LV  N      A+    R+QL  ITP+++T+
Sbjct: 27  VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTF 86

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N +I  YC L  +  A  ++ ++   G  PD ++  T++  LC                 
Sbjct: 87  NTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCL---------------- 130

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                   G++ EA    + +   G   + V+Y  ++NG C++GE   A ++L+++    
Sbjct: 131 -------NGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKL 183

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
              N V Y+  ++ LC      EA E+ +    +  +P+ +T+S +++G    G+  EA 
Sbjct: 184 VNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAF 243

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN----------- 478
            +  EMV     P     N+L+ +LC+EG     K  +   + +   VN           
Sbjct: 244 GLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGK 303

Query: 479 ------VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
                 V ++T +I+  C+   ++EALSL ++M      PD VTY+++ID L K+ R+  
Sbjct: 304 RRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISH 363

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIE 590
           A EL+ +M ++G    V+TY + +H  C+  +V+  + L++K+  +  Q     YN +I+
Sbjct: 364 AWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILID 423

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC  G  E A  I   +L    K    T ++++     +G+   A  +  +M +    P
Sbjct: 424 GLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTP 483

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
           D+   + +   L    ++ +A+ L+   + RG ++ K E
Sbjct: 484 DVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKVE 522



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 198/430 (46%), Gaps = 29/430 (6%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            F+ ++  Y   G++  A  VL+ + K    P+ +   T I  L +  K+ +AL F + +
Sbjct: 85  TFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHV 144

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G   N ++Y  LI G C +   + A++++ ++  K  + + V Y T++  LCKEK +
Sbjct: 145 IARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLV 204

Query: 298 KEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            E  +L  +M         V  S L +     G+ +EA  L ++M      PDV T+  +
Sbjct: 205 TEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNIL 264

Query: 346 VNGFCR-----------------VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           V+  C+                 V ++++AK +   +      P+  SYT  +  LC   
Sbjct: 265 VDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIK 324

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              EA  + N    +  TP+ +TYS ++ GL +  ++S A +++ +M  +G     +   
Sbjct: 325 MVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYT 384

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
             + +LC+  ++D A   +++  ++G   N+  +  LI G C++G  E A  +  D+ + 
Sbjct: 385 SFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIK 444

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
                  TY  +I+ L   G  +EA  L+ KM   G  P VVTY T+I    +       
Sbjct: 445 GYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKA 504

Query: 569 LKLLEKMLSK 578
            KLL +M+++
Sbjct: 505 EKLLREMIAR 514



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 183/386 (47%), Gaps = 40/386 (10%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +R + + Y +++  L K    + A +VLR +  + +      +S ++ +  +   +  A 
Sbjct: 149 FRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAY 208

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            + S M    V+P+++  +  I+   +  +  +A      M L  I P+V T+N L+   
Sbjct: 209 ELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDAL 268

Query: 257 C-----------------DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
           C                 +++++  A  + + +  +  +PD  SY  ++  LCK K +  
Sbjct: 269 CKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMV-- 326

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                                +EA  L N+M   G  PD VTY+++++G C+   +  A 
Sbjct: 327 ---------------------DEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAW 365

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++L QM+  G   + ++YT+FL+ LC N +  +A  ++   +++   PN  TY++++ GL
Sbjct: 366 ELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGL 425

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            +EG+   A  + ++++ KG+  T    N++I  LC EG  D A   +++  + GC  +V
Sbjct: 426 CKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDV 485

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDM 505
           V + ++IR   +  +  +A  LL +M
Sbjct: 486 VTYETIIRALFKNDENHKAEKLLREM 511



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 118/261 (45%), Gaps = 23/261 (8%)

Query: 109 RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA 168
           + + AV+  + ++    +  +    + R   D   Y ++++ L K K+   A  +   M 
Sbjct: 278 KNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMR 337

Query: 169 RRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
            +GI      +S L+    ++ ++ +A  +L  M       +++   + +H L   +++ 
Sbjct: 338 CKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVD 397

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           KA+  +++++  GI PN+ TYN LI G C   R ++A  +  ++ +KG      +Y  ++
Sbjct: 398 KAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMI 457

Query: 289 GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             LC E                       G  +EA  L+ +M   GC PDVVTY  ++  
Sbjct: 458 NGLCLE-----------------------GLFDEAMTLLEKMEDNGCTPDVVTYETIIRA 494

Query: 349 FCRVGELDQAKKMLQQMYHHG 369
             +  E  +A+K+L++M   G
Sbjct: 495 LFKNDENHKAEKLLREMIARG 515


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 243/520 (46%), Gaps = 29/520 (5%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +LEI  +  L + A+ V   M+ RG+     ++  +++   R GK++ A   L+ M +  
Sbjct: 188 VLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRG 247

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
             P+   C   +  L     + +A+ +  +M   G  PN++ +  LI G C    IK A 
Sbjct: 248 FIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAF 307

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------- 313
           ++++EM   G  P+  ++  ++  LCK    ++   L  K+V                  
Sbjct: 308 EMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGG 367

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           +  + ++  A+ L ++M + G  P+V TYT ++NG C+ G   +A +++  M   G  PN
Sbjct: 368 YCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPN 427

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             +Y A ++ LC   ++ EA E++N +       + +TY++++    ++  +++A     
Sbjct: 428 IYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFC 487

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            M K GF       N+LI + CR+ KM  +++  Q  ++ G       +TS+I  +C++G
Sbjct: 488 RMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 547

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           D++ AL    +M      PD+ TY ++I  L K   V+EA +L   M+ +GL P  VT  
Sbjct: 548 DIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRV 607

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           T+ + YC+     + + LLE +  K   RT    ++  LCS   +  A     K+L   S
Sbjct: 608 TLAYEYCKRNDSANAMILLEPLDKKLWIRTV-RTLVRKLCSEKKVGVAALFFQKLLEKDS 666

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNR-NLIPDL 652
            AD  T              L A+  AC    + NL+ DL
Sbjct: 667 SADRVT--------------LAAFTTACSESGKNNLVTDL 692



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 148/585 (25%), Positives = 239/585 (40%), Gaps = 86/585 (14%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           + A L S++   VAL FFYWA    ++RH   +Y +  + L      Q A  V+R M R 
Sbjct: 97  VVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRN 156

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
                          +S  G+L  A+ ++  MQ                           
Sbjct: 157 ---------------FSEIGRLNEAVGMVMDMQNQ------------------------- 176

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
                     G+TP+ +T NC+++   +L  I+ A  + DEM ++G  PD  SY      
Sbjct: 177 ----------GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY------ 220

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
             K   I   RD               G+I+EA   +  M Q G IPD  T T ++   C
Sbjct: 221 --KLMVIGCFRD---------------GKIQEADRWLTGMIQRGFIPDNATCTLILTALC 263

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
             G +++A    ++M   G KPN +++T+ ++GLC  G   +A EM+       W PN  
Sbjct: 264 ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 323

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFF-PTPVEINLLIQSLCREGKMDGAKKFMQE 469
           T++ ++ GL + G   +A  +  ++V+   + P       +I   C+E K++ A+     
Sbjct: 324 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              +G   NV  +T+LI G C+ G    A  L++ M      P+  TY   ID+L K  R
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY---- 585
             EA EL+ K  S GL    VTY  +I   C+   +   L    +M      +T +    
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM-----NKTGFEADM 498

Query: 586 ---NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
              N +I   C    ++E+ ++   V+         T   ++  Y  +G   LA K    
Sbjct: 499 RLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHN 558

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
           M     +PD      +   L  +   +EA  L    ++RG   P+
Sbjct: 559 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 603



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 68/168 (40%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++++   K      A      M + G E      + L+ A+ R  K++ +  + 
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            ++    + P      + I        +  AL++   M+  G  P+  TY  LI G C  
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
             + +A KL + M  +G SP +V+  T+    CK         L+E +
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL 629


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 228/491 (46%), Gaps = 53/491 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRG-IECRPEAFSY--LMVAYSRAGKLRNAM 196
           D + Y  +L  L +      A  +LR+M+    +  RP A SY  LM A     +   A+
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  MQ   V P+++   T I  L     +  A+  L  M  +GI PNV+ Y+CL+ GY
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
           C   R +   K+ +EM  +G  PD V Y  ++  LC+  ++K+   +M+ M         
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTY---------------------- 342
                  N    +G + EA +L   MS+ G  PDVVTY                      
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 343 ---------------TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
                           +V++G C++G + QA ++   M  +GC+ N V++   + GL   
Sbjct: 295 MMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRV 354

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            K  +A E+++        P++ TYS++++G  +  ++  A   + EM  +G  P PV  
Sbjct: 355 HKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHY 414

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             L++++C +G M  A+    E +++ C ++   ++++I G  + G+ + A   L DM  
Sbjct: 415 IPLLKAMCDQGMMGQARDLFNE-MDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMID 473

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD VTY+  I+  +K+G +  A  ++ +M + G VP V  + ++I  Y   G  E 
Sbjct: 474 EGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEK 533

Query: 568 LLKLLEKMLSK 578
           +L+L  +M +K
Sbjct: 534 ILELTREMTAK 544



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 203/412 (49%), Gaps = 28/412 (6%)

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           PN ++Y  L++  C   R   A+ L+  M   G  PD V+Y T++  LC           
Sbjct: 92  PNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLC----------- 140

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                       D   ++ A EL+N+M + G  P+VV Y+ +++G+C+ G  +   K+ +
Sbjct: 141 ------------DAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFE 188

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   G +P+ V YTA ++ LC +GK  +A  +++   E    PN +TY+V+++ + +EG
Sbjct: 189 EMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEG 248

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV--NVVN 481
            + EA D+ + M +KG  P  V  N LI  L    +MD A   ++E +     V  +++ 
Sbjct: 249 SVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMT 308

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           F S+I G C+ G + +AL +   M       + V +  +I  L +  +V++A ELM +M 
Sbjct: 309 FNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMA 368

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLE 599
           S GL P   TY  +I+ +C++ +VE     L +M  +  +     Y  +++ +C  G + 
Sbjct: 369 SSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMG 428

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           +A  +  ++ R   K DA+    ++      G   +A +    M +  LIPD
Sbjct: 429 QARDLFNEMDRNC-KLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPD 479



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 222/440 (50%), Gaps = 26/440 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +VY  +L    KT   +   +V   M+ RGIE     ++ L+ +  R GK++ A  V+ M
Sbjct: 165 VVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDM 224

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  + PN++  N  I+ +     + +AL   + M   G+ P+V+TYN LI G   +  
Sbjct: 225 MTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLE 284

Query: 262 IKDAIKLIDEMPLKG---CSPDKVSYYTVMGYLCK---EKRIKEVRDLMEKMVNDSNLFH 315
           + +A+ L++EM ++G     PD +++ +V+  LCK    ++  +VR +M +     NL  
Sbjct: 285 MDEAMALLEEM-MQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVA 343

Query: 316 DQ---------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                       ++++A EL+++M+  G  PD  TY+ ++NGFC++ ++++A+  L +M 
Sbjct: 344 FNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMR 403

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
           H G +P  V Y   L  +C  G   +AR++ N  +      +A  YS ++HG  + G+  
Sbjct: 404 HQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKL-DAAAYSTMIHGAFKSGEKK 462

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
            A + +++M+ +G  P  V  ++ I    + G +  A++ +++    G   +V  F SLI
Sbjct: 463 IAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLI 522

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM------ 540
           +G+  KGD E+ L L  +M       D    +TI+ +L   G   E  +L+  +      
Sbjct: 523 QGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL---GASIEGQKLLQSLPGFDTE 579

Query: 541 LSKGLVPTVVTYRTVIHRYC 560
           +SKG V +      ++ ++C
Sbjct: 580 ISKGDVISPHDVMNMLQKHC 599



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 150/282 (53%), Gaps = 7/282 (2%)

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH---GCKPNTVSYTAFLNGLCH 386
           +S +  + D V+Y  V+   CR G LD A  +L+ M H      +PN +SYT  +  LC 
Sbjct: 47  LSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCA 106

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
           + ++ +A  ++ + ++    P+ +TY  ++ GL     +  A +++ EM + G  P  V 
Sbjct: 107 DRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVV 166

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            + L+   C+ G+ +   K  +E   +G   +VV +T+LI   C+ G +++A  ++D M 
Sbjct: 167 YSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMT 226

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
               +P+ VTY  +I+++ K G V EA +L   M  KG+ P VVTY T+I     V  ++
Sbjct: 227 ERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMD 286

Query: 567 DLLKLLEKMLSKQ-KCRT---AYNQVIENLCSFGYLEEAGKI 604
           + + LLE+M+  + + R     +N VI  LC  G++ +A ++
Sbjct: 287 EAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQV 328



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 146/338 (43%), Gaps = 53/338 (15%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           + R R D + +  ++  L K    + A +V  +MA  G  C   AF+ L+    R  K++
Sbjct: 299 ETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVK 358

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            AM                                     ++ M  +G+ P+  TY+ LI
Sbjct: 359 KAM-----------------------------------ELMDEMASSGLQPDSFTYSILI 383

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND--- 310
            G+C + +++ A   + EM  +G  P+ V Y  ++  +C +  + + RDL  +M  +   
Sbjct: 384 NGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKL 443

Query: 311 -----SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                S + H     G  + A+E +  M   G IPD VTY+  +N F + G+L  A+++L
Sbjct: 444 DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVL 503

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNG---KSLE-AREMINTSEEEWWTPNAITYSVVMHG 418
           +QM   G  P+   + + + G    G   K LE  REM  T+++    P  I+  V   G
Sbjct: 504 KQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREM--TAKDVALDPKIISTIVTSLG 561

Query: 419 LRREG-KLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
              EG KL ++       + KG   +P ++  ++Q  C
Sbjct: 562 ASIEGQKLLQSLPGFDTEISKGDVISPHDVMNMLQKHC 599



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 5/213 (2%)

Query: 445 VEINLLIQSLCREGKMDGAK---KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           V  N ++ +LCR+G +D A    + M          N +++T+L+R  C      +A+ L
Sbjct: 57  VSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGL 116

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           L  M  C   PD VTY T+I  L     V+ A EL+ +M   G+ P VV Y  ++H YC+
Sbjct: 117 LRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCK 176

Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            GR E + K+ E+M  +  +     Y  +I++LC  G +++A +++  +     + +  T
Sbjct: 177 TGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVT 236

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
            +VL+ S   +G    A  +   M  + + PD+
Sbjct: 237 YNVLINSMCKEGSVREALDLRKNMSEKGVQPDV 269



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 36/208 (17%)

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMY---LCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           + V++ +++   C++G L+ AL LL  M         P+ ++YTT++ AL  + R  +A 
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCS 594
            L+  M   G+ P VVTY T+I                                   LC 
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIR---------------------------------GLCD 141

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
              ++ A ++L ++  +  + +      L+  Y   G      KV   M  R + PD+ +
Sbjct: 142 AADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVM 201

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERG 682
              + + L   GK ++A  +M    ERG
Sbjct: 202 YTALIDSLCRHGKVKKAARVMDMMTERG 229


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 216/453 (47%), Gaps = 14/453 (3%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNA 195
           + D   Y ++L+ L   K  Q A  +L +MA     C  +  +Y  V     R G+L  A
Sbjct: 168 KPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKA 227

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +   M     +P+++  ++ I  L     + KA +   RM   G+ P+ + Y  L+ G
Sbjct: 228 YSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHG 287

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----D 310
           YC   + K+AI +  +M   G  PD V+Y  +M YLCK  +  E R + + +V      D
Sbjct: 288 YCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPD 347

Query: 311 SN----LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
           S     L H    +G + E  +L++ M + G       +  ++  + +  ++D+A  +  
Sbjct: 348 STTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFS 407

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M   G  P+ V+Y   L+ LC  G+  +A    N+ + E   PN + ++ ++HGL    
Sbjct: 408 NMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCD 467

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           K  +  ++  EM+ +G     +  N ++ +LC++G++  AK      +  G   N   + 
Sbjct: 468 KWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYN 527

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           +LI G+C  G ++EA+ LL  M      P  VTY TII+  S+NGR+E+   L+ +M  K
Sbjct: 528 TLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGK 587

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           G+ P +VTY  ++    Q GR     +L  +M+
Sbjct: 588 GVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 620



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 240/489 (49%), Gaps = 18/489 (3%)

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           PN L  ++   +   G +  +    L RM   G  P++ +Y  L+KG CD    + A+ L
Sbjct: 134 PNPLQSSSQGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDL 193

Query: 269 IDEMP-LKG-CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-------------SNL 313
           +  M   KG C  D V+Y TV+  L +E ++ +   L + M++              S L
Sbjct: 194 LHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISAL 253

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
              Q  +++A ++  +M + G +PD + YT++V+G+C  G+  +A  + ++M  HG +P+
Sbjct: 254 SKTQA-MDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPD 312

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            V+YTA ++ LC NGKS EAR++ ++  +    P++ TY  ++HG   EG L E  D++ 
Sbjct: 313 VVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLD 372

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            M+KKG        N+++ +  +  K+D A         +G   ++VN+ +++   C  G
Sbjct: 373 LMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAG 432

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            +++ALS  + +      P+ V +TT+I  L    + ++  EL  +M+ +G+    + + 
Sbjct: 433 RVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFN 492

Query: 554 TVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            ++   C+ GRV +   L + M  +  +     YN +I+  C  G ++EA K+LG ++  
Sbjct: 493 AIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFN 552

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
             K    T + ++  Y   G       +   M  + + P +   + + + L   G++  A
Sbjct: 553 GVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAA 612

Query: 672 DTLMLRFVE 680
             L LR ++
Sbjct: 613 KELYLRMIK 621



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 202/444 (45%), Gaps = 16/444 (3%)

Query: 114 VLRSQADERVALQ----FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR 169
           +L+   D++ + Q        AD + R   D + Y  ++  L +      A  +   M  
Sbjct: 177 LLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLD 236

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           RG       +S ++ A S+   +  A  V + M K  V P+ ++  + +H      K  +
Sbjct: 237 RGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKE 296

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A+   ++M   G+ P+V+TY  L+   C   +  +A K+ D +  +G  PD  +Y T++ 
Sbjct: 297 AIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLH 356

Query: 290 YLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIP 337
               E  + E+ DL++ M+                 +    +++EA  + + M Q G  P
Sbjct: 357 GYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNP 416

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D+V Y  V++  C  G +D A      +   G  PN V +T  ++GLC   K  +  E+ 
Sbjct: 417 DIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELA 476

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
               +     + I ++ +M  L ++G++ EA ++   MV+ G  P     N LI   C +
Sbjct: 477 FEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLD 536

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           GKMD A K +   +  G   + V + ++I G+ Q G +E+ L+LL +M     +P  VTY
Sbjct: 537 GKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTY 596

Query: 518 TTIIDALSKNGRVEEATELMMKML 541
             ++  L + GR   A EL ++M+
Sbjct: 597 EMLLQGLFQAGRTVAAKELYLRMI 620



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/455 (21%), Positives = 188/455 (41%), Gaps = 93/455 (20%)

Query: 265 AIKLIDEMPLKGCS---PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           AI L + MP  G +   P+  +Y  V+G   +  R+      + +++  + L H+   ++
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVIT-TGLRHEPNPLQ 138

Query: 322 EAKE---------------LVNQMSQMGCIPD---------------------------- 338
            + +               ++ +M ++GC PD                            
Sbjct: 139 SSSQGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMA 198

Query: 339 ---------VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
                    VV YT V+NG  R G+LD+A  +   M   G  P+ V+Y++ ++ L     
Sbjct: 199 DHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQA 258

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A ++     +    P+ I Y+ ++HG    GK  EA  + ++M + G  P  V    
Sbjct: 259 MDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTA 318

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL-------------- 495
           L+  LC+ GK   A+K     + +G   +   + +L+ G+  +G L              
Sbjct: 319 LMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKG 378

Query: 496 ---------------------EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
                                +EAL +  +M     +PD V Y T++D L   GRV++A 
Sbjct: 379 MQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDAL 438

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENL 592
                + S+GL P +V + T+IH  C   + + + +L  +M+ +  C     +N ++ NL
Sbjct: 439 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNL 498

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           C  G + EA  +   ++R   + + +T + L++ Y
Sbjct: 499 CKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGY 533



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 138/275 (50%), Gaps = 23/275 (8%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           +L LM ++G++     F+ +M AY++  K+  A+ V S M++  + P+++   T + +L 
Sbjct: 370 LLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILC 429

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              ++  AL     ++  G+ PN++ +  LI G C   +     +L  EM  +G   D +
Sbjct: 430 TAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTI 489

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
            +  +MG LCK                       +GR+ EAK L + M ++G  P+  TY
Sbjct: 490 FFNAIMGNLCK-----------------------KGRVIEAKNLFDLMVRIGIEPNTNTY 526

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             +++G+C  G++D+A K+L  M  +G KP+ V+Y   +NG   NG+  +   ++   + 
Sbjct: 527 NTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDG 586

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +   P  +TY +++ GL + G+   A ++   M+K
Sbjct: 587 KGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 621



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 125/292 (42%), Gaps = 44/292 (15%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS-LCREG----KMD 461
           PN  TY +V+   RR G+L  A   V  ++  G    P  +    Q  LC  G    +MD
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMD 156

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK--DPDTVTYTT 519
              + M E    GC  ++ ++T L++G C     ++AL LL  M   K     D V YTT
Sbjct: 157 IVLRRMPEL---GCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTT 213

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +I+ L + G++++A  L   ML +G  P VVTY ++I                   LSK 
Sbjct: 214 VINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSII-----------------SALSKT 256

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
           +                 +++A ++  ++++     D      LV  Y + G P  A  +
Sbjct: 257 QA----------------MDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGI 300

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
             +M    + PD+     + + L   GKS EA  +    V+RGH +P S  +
Sbjct: 301 FKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH-KPDSTTY 351


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 252/546 (46%), Gaps = 27/546 (4%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y  +++ L + +  + A   LR    + I     +F+ +M  Y + G +  A      + 
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           K  + P++   N  I+ L +   +A+AL     M   G+ P+ +TYN L KG+  L  I 
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------- 316
            A ++I +M  KG SPD ++Y  ++   C+   I     L++ M++     +        
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369

Query: 317 ------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                  GRI+EA  L NQM   G  PD+V Y+ V++G C++G+ D A  +  +M     
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            PN+ ++ A L GLC  G  LEAR ++++      T + + Y++V+ G  + G + EA +
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           + + +++ G  P+    N LI   C+   +  A+K +      G A +VV++T+L+  + 
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK----------- 539
             G+ +    L  +M      P  VTY+ I   L +  + E    ++ +           
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 609

Query: 540 -MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFG 596
            M S+G+ P  +TY T+I   C+V  +      LE M S+        YN +I++LC +G
Sbjct: 610 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
           Y+ +A   +  +              L++++  KG P +A K+  ++ +R     ++   
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729

Query: 657 KVSERL 662
            V  RL
Sbjct: 730 AVINRL 735



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 206/448 (45%), Gaps = 27/448 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++ +      +  GA  V+R M  +G+      ++ L+    + G +   + +L
Sbjct: 291 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL 350

Query: 200 SMMQKAAVAPNLLI-CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
             M       N +I C+  +  L    ++ +AL    +M+  G++P+++ Y+ +I G C 
Sbjct: 351 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
           L +   A+ L DEM  K   P+  ++  ++  LC++  + E R L++ +++         
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470

Query: 312 -NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            N+  D     G IEEA EL   + + G  P V T+ +++ G+C+   + +A+K+L  + 
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
            +G  P+ VSYT  ++   + G +    E+    + E   P  +TYSV+  GL R  K  
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK-H 589

Query: 427 EACDVV-------------REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           E C+ V             R+M  +G  P  +  N +IQ LCR   + GA  F++   ++
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
               +   +  LI   C  G + +A S +  +           YTT+I A    G  E A
Sbjct: 650 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            +L  ++L +G   ++  Y  VI+R C+
Sbjct: 710 VKLFHQLLHRGFNVSIRDYSAVINRLCR 737



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 224/489 (45%), Gaps = 26/489 (5%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR 162
           LR +   +I   L S++ + +++ FF      + +RH      ++  +L+  +  +  + 
Sbjct: 47  LRHVHVEEIMDELMSESSD-LSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQV 105

Query: 163 VLRLMAR-----RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           +L  + +     R  E     +  L+   SR   + +++Y+L  M+   +  +    N+ 
Sbjct: 106 ILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSV 165

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           ++     +K+    + ++         N  TY+ ++ G C   +++DA+  +     K  
Sbjct: 166 LYHFRETDKMWDVYKEIK-------DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDI 218

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDL--------MEKMVNDSNLFHDQ----GRIEEAKE 325
            P  VS+ ++M   CK   +   +          +   V   N+  +     G I EA E
Sbjct: 219 GPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALE 278

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L + M++ G  PD VTY  +  GF  +G +  A ++++ M   G  P+ ++YT  L G C
Sbjct: 279 LASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQC 338

Query: 386 HNGKSLEAREMINTSEEEWWTPNAIT-YSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             G       ++       +  N+I   SV++ GL + G++ EA  +  +M   G  P  
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 398

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  +++I  LC+ GK D A     E  +K    N     +L+ G CQKG L EA SLLD 
Sbjct: 399 VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           +    +  D V Y  +ID  +K+G +EEA EL   ++  G+ P+V T+ ++I+ YC+   
Sbjct: 459 LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 518

Query: 565 VEDLLKLLE 573
           + +  K+L+
Sbjct: 519 IAEARKILD 527



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 172/395 (43%), Gaps = 28/395 (7%)

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           L  ++R KE++ ++E+++ +   F              +    G + D++ + +      
Sbjct: 94  LAGQRRFKELQVILEQLLQEEGTF-------------RKWESTGLVWDMLLFLS-----S 135

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           R+  +D +  +L++M       +T SY + L       K  +  + I    E        
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH------- 188

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TYS V+ GL R+ KL +A   +R    K   P+ V  N ++   C+ G +D AK F    
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           L  G   +V +   LI G C  G + EAL L  DM     +PD+VTY  +       G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ---KCRTAYNQ 587
             A E++  ML KGL P V+TY  ++   CQ+G ++  L LL+ MLS+          + 
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           ++  LC  G ++EA  +  ++       D     +++      G   +A  +   M ++ 
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++P+ +    +   L  +G   EA +L+   +  G
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/283 (20%), Positives = 131/283 (46%), Gaps = 11/283 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ ++  Y+++G +  A+ +  ++ +  + P++   N+ I+       +A+A + L+ ++
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
           L G+ P+V++Y  L+  Y +    K   +L  EM  +G  P  V+Y  +   LC+  + +
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
               ++ + +            E+ K+ +  M   G  PD +TY  ++   CRV  L  A
Sbjct: 591 NCNHVLRERI-----------FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
              L+ M       ++ +Y   ++ LC  G   +A   I + +E+  + +   Y+ ++  
Sbjct: 640 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
              +G    A  +  +++ +GF  +  + + +I  LCR   M+
Sbjct: 700 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/564 (25%), Positives = 242/564 (42%), Gaps = 70/564 (12%)

Query: 80  EVCRLIELRSAWSPKLEGELRNLLRSLKPRQICA-VLRSQADERVALQFFYWADRQWRYR 138
           E+ ++I     W+   +   R  L      +I   +     D  +AL FF W++     +
Sbjct: 35  EIIKVILTNRGWNLGSQNGYRIDLSQFNVMKILNDLFEESTDAALALYFFRWSEYCMGSK 94

Query: 139 HDPIVYYMMLEILSKTKLCQGA-KRVLRLMA---------------------RRGIECRP 176
           H       M+ IL    +   A   +L L++                     RR +E   
Sbjct: 95  HTVESVCTMIHILVSGNMNHKAMDLLLHLISYNSGEEGWHNIFLKIHETHTKRRVLE--- 151

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
             +  L+  Y +    + A+ ++  M+   + P + +CN+ +  L+   +L  A  FL+ 
Sbjct: 152 TVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKE 211

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M+  G+  N    +  I GYC    I    KL+ EM   G  PD V+Y  V+  LCK   
Sbjct: 212 MKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSL 271

Query: 297 IKEVRDLMEKMVN-----------------------------------DSNLFH------ 315
           +KE   ++ KM                                       N+F       
Sbjct: 272 LKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFIS 331

Query: 316 ---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                G + +A ++   M +MG IPD  +YT ++ G+C+V ++  A K L +M   G +P
Sbjct: 332 KLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRP 391

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           +  +YT  ++  C  G    A  +      E   P+ ++Y+ +M+G  ++G L +A +++
Sbjct: 392 SVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELL 451

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             M   G  P  V  N+LI  L + G ++ AK  + E   +G + +VV FT++I GF  K
Sbjct: 452 SMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNK 511

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G+ EEA  L   M     +PD VT + +++   +   + EA  L  KML  GL   V+ Y
Sbjct: 512 GNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILY 571

Query: 553 RTVIHRYCQVGRVEDLLKLLEKML 576
            ++IH +C +G ++D   L+  M+
Sbjct: 572 NSLIHGFCSLGNIDDACHLVSMMI 595



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 182/384 (47%), Gaps = 26/384 (6%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D + Y ++++ L K  L + A  +L  M + G+     + S ++  Y + GK   AM 
Sbjct: 253 KPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMD 312

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL +     ++PN+ + N+ I  L     + KA +  + M   G+ P+  +Y  ++ GYC
Sbjct: 313 VLEVFN---LSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYC 369

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
            +  I +A+K + +M  +G  P   +Y  ++   CK                        
Sbjct: 370 KVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKP----------------------- 406

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G +E A+ L  +M   G +PDVV+Y  ++NG+ + G L +A ++L  M   G  P+ V+Y
Sbjct: 407 GNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTY 466

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              ++GL   G   EA+++++      ++P+ +T++ ++ G   +G   EA  +   M +
Sbjct: 467 NILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSE 526

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
               P  V  + L+   CR   M  A     + L+ G   +V+ + SLI GFC  G++++
Sbjct: 527 HHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDD 586

Query: 498 ALSLLDDMYLCKKDPDTVTYTTII 521
           A  L+  M      P+ +T+  ++
Sbjct: 587 ACHLVSMMIEHGIMPNNITHHALV 610



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 211/476 (44%), Gaps = 23/476 (4%)

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL-------HRIKDAIKL 268
           T IH+LV GN   KA+  L  +         ++YN   +G+ ++       H  +  ++ 
Sbjct: 102 TMIHILVSGNMNHKAMDLLLHL---------ISYNSGEEGWHNIFLKIHETHTKRRVLET 152

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVN 328
           +  M L  C   +      +  +CK + +  +  L+    +      +  ++  A + + 
Sbjct: 153 VYGM-LVNCYVKENMTQVALKLICKMRHLN-IFPLIGVCNSLLKALLESEQLNLAWDFLK 210

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +M   G   +    +  ++G+C  G +D   K+L +M + G KP+ V+YT  ++ LC   
Sbjct: 211 EMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMS 270

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              EA  ++    +     ++++ S V+ G  + GK  EA DV+         P     N
Sbjct: 271 LLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVF---NLSPNIFVFN 327

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
             I  LC +G M  A K  Q+    G   +  ++T+++ G+C+  D+  AL  L  M   
Sbjct: 328 SFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKR 387

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P   TYT +ID+  K G +E A  L  +M+++GLVP VV+Y T+++ Y + G ++  
Sbjct: 388 GIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKA 447

Query: 569 LKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            +LL  M S         YN +I  L   G + EA  IL ++ R     D  T   ++  
Sbjct: 448 FELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGG 507

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           + NKG    A+ +   M   +L PD+  C  +           EA+ L  + ++ G
Sbjct: 508 FSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAG 563


>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
          Length = 567

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 247/508 (48%), Gaps = 37/508 (7%)

Query: 111 ICAVLRSQADERVALQFFYWADRQW----RYRHDPIVYYMMLEILSKTKLCQGAKRVLRL 166
           +  V+  Q +   AL FF WA        +Y H    Y  + ++L    L   A  +L+ 
Sbjct: 58  VTKVIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLK- 116

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
                 +      S L+ AY   G ++ A++     ++      L   N+ + VLV  N 
Sbjct: 117 ---NSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNS 173

Query: 227 LAKALRFLERMQLAGIT-PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           +  A  F  ++    +  P+V TY  +I+GYC +  I++A K+ D M +K   P+ ++Y 
Sbjct: 174 IKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK---PNLLAYN 230

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
           T++   CK+  ++  R + ++M                      MS   C+P+ VTYT +
Sbjct: 231 TMINGFCKKGDMESARLVFDRM----------------------MSGEDCLPNHVTYTTL 268

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G+C+ GEL++AKK + +M + GC+PN ++Y A + GLC NG+  EA+ ++       +
Sbjct: 269 IDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF 328

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
             N  T+  ++ GL   GK  +A   +R +++    P      ++I   C+ GK D A  
Sbjct: 329 KDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAIS 388

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            ++E   +G    V +F ++ R   + G+L+ A+ LL  M      P+ V+Y TII  L 
Sbjct: 389 LLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLC 448

Query: 526 -KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--R 582
              GR+++  +L+ +M+  G       Y  ++  YC+ G VE+++++  +M++K+     
Sbjct: 449 MAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGL 508

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLR 610
            +++ +++ LC+ G + EA K+     R
Sbjct: 509 ESFSVLVKQLCAKGKVTEAEKLFDTCSR 536



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 204/429 (47%), Gaps = 31/429 (7%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LIK Y D   +K AI    +           SY +++G L +   IK   +   ++V ++
Sbjct: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
            +                       PDV TYT ++ G+C++G ++ AKK+   M     K
Sbjct: 189 VV----------------------PPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVK 223

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMIN-TSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           PN ++Y   +NG C  G    AR + +     E   PN +TY+ ++ G  ++G+L EA  
Sbjct: 224 PNLLAYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKK 283

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
            + EM+ +G  P  +  N +I  LC  G++D AK  M +    G   NV    S+++G C
Sbjct: 284 CMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLC 343

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
             G  ++A+  L ++     +PD  +Y  +I+   K G+ +EA  L+ +M ++GL PTV 
Sbjct: 344 VVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVF 403

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLC-SFGYLEEAGKILG 606
           ++  V     + G ++  + LL++M  +  C     +YN +I  LC + G +++   ++ 
Sbjct: 404 SFNAVFRILVENGELDRAILLLKQM-PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVD 462

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
           +++R+    D +    L++ Y  +G      ++A  M  +  +  L+    + ++L  +G
Sbjct: 463 RMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLESFSVLVKQLCAKG 522

Query: 667 KSEEADTLM 675
           K  EA+ L 
Sbjct: 523 KVTEAEKLF 531



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 204/435 (46%), Gaps = 33/435 (7%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYM--MLEILSKTKLCQGAKRVLRLMA 168
           I  ++++  D        +W  +  +  +   +Y    +L +L +    + A+     + 
Sbjct: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185

Query: 169 RRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           +  +   P+  +Y  ++  Y + G + NA  V  +M    V PNLL  NT I+       
Sbjct: 186 KENV-VPPDVSTYTTMIRGYCKMGMIENAKKVFDVM---TVKPNLLAYNTMINGFCKKGD 241

Query: 227 LAKALRFLERMQLAG--ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           +  A    +RM ++G    PN +TY  LI GYC    +++A K ++EM  +GC P++++Y
Sbjct: 242 MESARLVFDRM-MSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTY 300

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ--------------GRIEEAKELVNQM 330
             ++  LC   R+ E + LM KM    N F D               G+ ++A   +  +
Sbjct: 301 NAMIYGLCINGRVDEAKMLMAKM--RLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNV 358

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            +    PDV +Y  V+NGFC++G+ D+A  +L++M   G KP   S+ A    L  NG+ 
Sbjct: 359 MEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGEL 418

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGL-RREGKLSEACDVVREMVKKGFFPTPVEINL 449
             A  ++    +    PN ++Y+ ++ GL   +G++ +  D+V  M++ G        + 
Sbjct: 419 DRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSC 478

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L++  C EG ++   +   E + K   + + +F+ L++  C KG + EA  L D    C 
Sbjct: 479 LLKGYCEEGNVENVMQIAHEMVTKKYVIGLESFSVLVKQLCAKGKVTEAEKLFDT---CS 535

Query: 510 KDP--DTVTYTTIID 522
           + P  D  +Y  ++D
Sbjct: 536 RCPAVDVDSYRRVLD 550



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 120/240 (50%), Gaps = 9/240 (3%)

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAV-NVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           N L+  L R   +  A++F  + + +     +V  +T++IRG+C+ G +E A  + D M 
Sbjct: 162 NSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMT 221

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS-KGLVPTVVTYRTVIHRYCQVGRV 565
           +    P+ + Y T+I+   K G +E A  +  +M+S +  +P  VTY T+I  YC+ G +
Sbjct: 222 V---KPNLLAYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGEL 278

Query: 566 EDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           E+  K + +M+++  CR     YN +I  LC  G ++EA  ++ K+     K + ST   
Sbjct: 279 EEAKKCMNEMMNR-GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKS 337

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +++     G    A      +   N+ PD+K  + V       GKS+EA +L+     RG
Sbjct: 338 MLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARG 397



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 9/206 (4%)

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
            + LI+ +  +G+++ A+         +      +Y +++  L +   ++ A E   +++
Sbjct: 126 ISKLIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIV 185

Query: 542 SKGLVPT-VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEE 600
            + +VP  V TY T+I  YC++G +E+  K+ + M  K     AYN +I   C  G +E 
Sbjct: 186 KENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNL-LAYNTMINGFCKKGDMES 244

Query: 601 AGKILGKVLRTASKADASTCHV----LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
           A  +  +++   S  D    HV    L++ Y  KG    A K    M NR   P+     
Sbjct: 245 ARLVFDRMM---SGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYN 301

Query: 657 KVSERLILEGKSEEADTLMLRFVERG 682
            +   L + G+ +EA  LM +    G
Sbjct: 302 AMIYGLCINGRVDEAKMLMAKMRLNG 327


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 230/473 (48%), Gaps = 14/473 (2%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           GI       + ++  + R  K   A  VL  + K    P+    NT I  L +  K+++A
Sbjct: 108 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 167

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           +  ++RM   G  P+V+TYN ++ G C       A+ L+ +M  +    D  +Y T++  
Sbjct: 168 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 227

Query: 291 LCKEKRIKEVRDLMEKM----VNDSNLFHDQ--------GRIEEAKELVNQMSQMGCIPD 338
           LC++  I     L ++M    +  S + ++         G+  +   L+  M     +P+
Sbjct: 228 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 287

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V+T+  +++ F + G+L +A ++ ++M   G  PN ++Y   ++G C   +  EA  M++
Sbjct: 288 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 347

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                  +P+ +T++ ++ G     ++ +   V R + K+G     V  ++L+Q  C+ G
Sbjct: 348 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 407

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           K+  A++  QE ++ G   +V+ +  L+ G C  G LE+AL + +D+   K D   V YT
Sbjct: 408 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 467

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           TII+ + K G+VE+A  L   +  KG+ P V+TY  +I   C+ G + +   LL KM   
Sbjct: 468 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 527

Query: 579 QKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
                   YN +I      G L  + K++ ++      ADAS+  ++++  L+
Sbjct: 528 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 580



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 213/468 (45%), Gaps = 16/468 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS    A +R  +    +     ++   +A N+   N  I+      K   A   L ++ 
Sbjct: 81  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 140

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+  T+N LIKG     ++ +A+ L+D M   GC PD V+Y +++  +C+     
Sbjct: 141 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 200

Query: 299 EVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
              DL+ KM  + N+  D              G I+ A  L  +M   G    VVTY ++
Sbjct: 201 LALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 259

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           V G C+ G+ +    +L+ M      PN +++   L+     GK  EA E+         
Sbjct: 260 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 319

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           +PN ITY+ +M G   + +LSEA +++  MV+    P  V    LI+  C   ++D   K
Sbjct: 320 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 379

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             +    +G   N V ++ L++GFCQ G ++ A  L  +M      PD +TY  ++D L 
Sbjct: 380 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 439

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
            NG++E+A E+   +    +   +V Y T+I   C+ G+VED   L   +  K  +    
Sbjct: 440 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 499

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            Y  +I  LC  G L EA  +L K+    +  +  T + L+ ++L  G
Sbjct: 500 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 547



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 212/430 (49%), Gaps = 12/430 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  + + G E     F+ L+      GK+  A+ ++  M +    P+++  N+ ++
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            +      + AL  L +M+   +  +V TY+ +I   C    I  AI L  EM  KG   
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
             V+Y +++  LCK  +  +   L++ MV+              ++F  +G+++EA EL 
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 311

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M   G  P+++TY  +++G+C    L +A  ML  M  + C P+ V++T+ + G C  
Sbjct: 312 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 371

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            +  +  ++     +     NA+TYS+++ G  + GK+  A ++ +EMV  G  P  +  
Sbjct: 372 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 431

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            +L+  LC  GK++ A +  ++       + +V +T++I G C+ G +E+A +L   +  
Sbjct: 432 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 491

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ +TYT +I  L K G + EA  L+ KM   G  P   TY T+I  + + G +  
Sbjct: 492 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 551

Query: 568 LLKLLEKMLS 577
             KL+E+M S
Sbjct: 552 SAKLIEEMKS 561



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 238/492 (48%), Gaps = 25/492 (5%)

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
           +A+ +   M ++   P+L+  +     +    +    L F ++++L GI  N+ T N +I
Sbjct: 61  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 120

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
             +C   +   A  ++ ++   G  PD  ++ T++  L  E                   
Sbjct: 121 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE------------------- 161

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
               G++ EA  LV++M + GC PDVVTY ++VNG CR G+   A  +L++M     K +
Sbjct: 162 ----GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 217

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             +Y+  ++ LC +G    A  +    E +    + +TY+ ++ GL + GK ++   +++
Sbjct: 218 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 277

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           +MV +   P  +  N+L+    +EGK+  A +  +E + +G + N++ + +L+ G+C + 
Sbjct: 278 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 337

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            L EA ++LD M   K  PD VT+T++I       RV++  ++   +  +GLV   VTY 
Sbjct: 338 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 397

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            ++  +CQ G+++   +L ++M+S         Y  +++ LC  G LE+A +I   + ++
Sbjct: 398 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 457

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
                      ++E     G    A+ + C +  + + P++     +   L  +G   EA
Sbjct: 458 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 517

Query: 672 DTLMLRFVERGH 683
           + L+ +  E G+
Sbjct: 518 NILLRKMEEDGN 529



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 190/387 (49%), Gaps = 23/387 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D   Y  +++ L +      A  + + M  +GI+     ++ L+    +AGK  +   
Sbjct: 215 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 274

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M    + PN++  N  + V V   KL +A    + M   GI+PN++TYN L+ GYC
Sbjct: 275 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 334

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
             +R+ +A  ++D M    CSPD V++ +++   C  KR+                    
Sbjct: 335 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV-------------------- 374

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
              ++  ++   +S+ G + + VTY+ +V GFC+ G++  A+++ Q+M  HG  P+ ++Y
Sbjct: 375 ---DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 431

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              L+GLC NGK  +A E+    ++       + Y+ ++ G+ + GK+ +A ++   +  
Sbjct: 432 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 491

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P  +   ++I  LC++G +  A   +++    G A N   + +LIR   + GDL  
Sbjct: 492 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 551

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           +  L+++M  C    D  +   +ID L
Sbjct: 552 SAKLIEEMKSCGFSADASSIKMVIDML 578



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 103/482 (21%), Positives = 208/482 (43%), Gaps = 52/482 (10%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I + ++L++  K    Q A  + + M  RGI      ++ LM  Y    +L  A  +L +
Sbjct: 289 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 348

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +   +P+++   + I    +  ++   ++    +   G+  N +TY+ L++G+C   +
Sbjct: 349 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 408

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSN 312
           IK A +L  EM   G  PD ++Y  ++  LC   ++++  ++ E +         V  + 
Sbjct: 409 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 468

Query: 313 LFHDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           +       G++E+A  L   +   G  P+V+TYT +++G C+ G L +A  +L++M   G
Sbjct: 469 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 528

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PN  +Y   +     +G    + ++I   +   ++ +A +  +V+  L    K     
Sbjct: 529 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRL--- 585

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF------- 482
             +R  + KG       + L      R   +   K F    +     VN +         
Sbjct: 586 -TLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAE 644

Query: 483 ----------TSLIRGFCQKG------------DLEEA-LSLLDDMYLCKKDPDTVTYTT 519
                     +S+++ F  +              LE+A   L+ D+ L     D V Y  
Sbjct: 645 LNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLEL---PTDAVHYAH 701

Query: 520 IIDALSKNGR---VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
               + + GR   V  A EL  +M+ +G+ P  +TY ++I  +C+  R+++  ++L+ M+
Sbjct: 702 RAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMV 761

Query: 577 SK 578
           +K
Sbjct: 762 TK 763



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/432 (21%), Positives = 182/432 (42%), Gaps = 51/432 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  +++     K      +V R +++RG+      +S L+  + ++GK++ A  + 
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 416

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    V P+++     +  L    KL KAL   E +Q + +   ++ Y  +I+G C  
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 476

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            +++DA  L   +P KG  P+ ++Y  ++  LCK                       +G 
Sbjct: 477 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK-----------------------KGS 513

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           + EA  L+ +M + G  P+  TY  ++    R G+L  + K++++M   G   +  S   
Sbjct: 514 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 573

Query: 380 FLNGL-----------CHNGKSLEAREMINTSEEE-----------WWTPNAITYSVVMH 417
            ++ L           C +  S   ++++  S  E            +  N IT S+ ++
Sbjct: 574 VIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVN 633

Query: 418 GLRREGKLSEACD-----VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
            +   G  S   +     + R  V K F    V + L+   L   G  D     M +   
Sbjct: 634 TIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRV-LVTNELLTWGLEDAECDLMVDLEL 692

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
              AV+  +    +R   +K  +  A  L  +M      P+T+TY+++ID   K  R++E
Sbjct: 693 PTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDE 752

Query: 533 ATELMMKMLSKG 544
           A +++  M++KG
Sbjct: 753 ANQMLDLMVTKG 764



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           GI PN +TY+ LI G+C  +R+ +A +++D M  KG   D    Y + G + K+++  E 
Sbjct: 729 GIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG---DSDIRYLLAGLMRKKRKGSET 785


>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 214/453 (47%), Gaps = 22/453 (4%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GKLR A+++ + M +  V P++L  N  ++ L     L KA   +  M   G +PN  T+
Sbjct: 145 GKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATF 204

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N  IKGYC  + +  A+ L   M   G  P+KV+Y  ++  LCK+  +K+ R L+EK+++
Sbjct: 205 NTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILD 264

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           D          +  KE            D++T T  ++G  + G++ QA     +M   G
Sbjct: 265 D----------DCGKE----------TSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRG 304

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            + + V+Y   ++G C       A        +    P+  TY+ ++ G  + G L EAC
Sbjct: 305 TQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEAC 364

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            +   M K G  P  +   ++IQ LC  G +  A +F+   L        + +  +I G 
Sbjct: 365 YIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGH 424

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
            + GDL  ALS+ D M      P+  TY  +I A  K G + +A  +  +ML  G+ P V
Sbjct: 425 GRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDV 484

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
           VTY  +I   C  GR+   L+L ++ML +  +     Y ++I   C  G++ EA ++L K
Sbjct: 485 VTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAK 544

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
           + R+    D +   +L++ Y    +P  AY + 
Sbjct: 545 LQRSGLSIDHAPFQILIQKYCRTRVPGRAYDLT 577



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 184/406 (45%), Gaps = 40/406 (9%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G++  A  L N+M Q G IPDV+T+  +VNG C+ G+L++A  ++++M   G  PN  +
Sbjct: 144 EGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCAT 203

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA-------- 428
           +  F+ G C N    +A  + +T       PN +TY++++H L ++G L +A        
Sbjct: 204 FNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKIL 263

Query: 429 --------CDVVR----------------------EMVKKGFFPTPVEINLLIQSLCREG 458
                    D++                       EM+++G     V  N+LI   C   
Sbjct: 264 DDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQ 323

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
            M+ A ++  E   +G   ++  + +LI GFC+ G+L+EA  +   M      PD ++Y 
Sbjct: 324 DMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYK 383

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            II  L  +G V  A + ++ ML   +VP  + +  VI  + + G + + L + ++M+S 
Sbjct: 384 MIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSF 443

Query: 579 QKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
                   YN +I      G + +A  I  ++L      D  T ++L+ +  N G    A
Sbjct: 444 GIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFA 503

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            ++   M  R   PD+    ++     + G   EA+ L+ +    G
Sbjct: 504 LRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSG 549



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 5/208 (2%)

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           +I++LC EGK+  A     + + KG   +V+    L+ G C+ GDLE+A +L+ +M    
Sbjct: 137 MIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIG 196

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P+  T+ T I     N  V++A  L   M + G+ P  VTY  +IH  C+ G ++D  
Sbjct: 197 PSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDAR 256

Query: 570 KLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKV-----LRTASKADASTCHVLV 624
           KLLEK+L     +   + +   +   G L++   +   V     L+  ++ D    +VL+
Sbjct: 257 KLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLI 316

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDL 652
             +        AY+  C MF R L+PD+
Sbjct: 317 HGFCLIQDMNSAYRYFCEMFKRGLLPDI 344



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 27/260 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y +++      +    A R    M +RG+   P+ F+Y  L+  + + G L  A Y
Sbjct: 308 DVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGL--LPDIFTYNTLISGFCKIGNLDEACY 365

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +  +M K   AP+L+     I  L +   + +A +FL  M    + P  L +N +I G+ 
Sbjct: 366 IHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHG 425

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               + +A+ + D+M   G  P+  +Y  ++       +IK                   
Sbjct: 426 RHGDLSNALSIRDQMVSFGIPPNVFTYNALI-----HAQIK------------------G 462

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G I +A  +  +M   G  PDVVTY  ++   C  G +  A ++  +M   G +P+ ++Y
Sbjct: 463 GNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITY 522

Query: 378 TAFLNGLCHNGKSLEAREMI 397
           T  + G C  G  +EA E++
Sbjct: 523 TELIRGFCIRGHVMEAEELL 542



 Score = 45.8 bits (107), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
           C  + D      +I  L   G++  A  L  KM+ KG++P V+T+  +++  C+ G +E 
Sbjct: 125 CTLEMDYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEK 184

Query: 568 LLKLLEKML---SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
              L+ +ML       C T +N  I+  C    +++A  +   +  +    +  T ++L+
Sbjct: 185 ADNLVREMLEIGPSPNCAT-FNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILI 243

Query: 625 ESYLNKGI 632
            +   KG+
Sbjct: 244 HALCKKGL 251


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 235/490 (47%), Gaps = 34/490 (6%)

Query: 102 LLR--SLKPRQIC--------AVLRSQADERVALQF--FYWADRQWRYRHDPIVYYMMLE 149
           LLR  SL+P   C         ++R+   +R+A Q      + R    R D + Y  ++ 
Sbjct: 99  LLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIR 158

Query: 150 ILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAP 209
            L        A  ++  M   GIE     +S L+  Y ++G+  +   V   M +  + P
Sbjct: 159 GLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEP 218

Query: 210 NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
           ++++    I  L    K  KA   ++ M   G+ PNV+TYN LI   C    +K+AI ++
Sbjct: 219 DVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVL 278

Query: 270 DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQ 329
            +M  KG +PD V+Y T++  L     + E   L+E+MV   N+                
Sbjct: 279 KKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVK-------------- 324

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
                  P+VVT+ +V+ G C +G + QA ++   M   GC  N V+Y   + GL    K
Sbjct: 325 -------PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A E+++        P++ TYS+++ G  +  ++  A D++  M  +G  P       
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIP 437

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L+ ++C +G M+ A+    E ++    ++VV ++++I G C+ GDL+ A  LL  +    
Sbjct: 438 LLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG 496

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             PD VTY+ +I+  +K+G +E A  ++ +M + G +P V  + ++I  Y   G +  +L
Sbjct: 497 LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVL 556

Query: 570 KLLEKMLSKQ 579
           +L+ +M++K 
Sbjct: 557 ELIREMITKN 566



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 221/472 (46%), Gaps = 29/472 (6%)

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
           + RAG L  AM   S+    A  PN +     +  L       +A+  L  M+ AG+  +
Sbjct: 93  HDRAGALLRAM---SLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRAD 149

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           V+TY  LI+G CD   +  A++L+ EM   G  P+ V Y +++   CK            
Sbjct: 150 VVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCK------------ 197

Query: 306 KMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                       GR E+  ++  +MS+ G  PDVV YT +++  C+VG+  +A  ++  M
Sbjct: 198 -----------SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMM 246

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G +PN V+Y   +N +C  G   EA  ++    E+   P+ +TY+ ++ GL    ++
Sbjct: 247 VRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEM 306

Query: 426 SEACDVVREMV--KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
            EA  ++ EMV  K    P  V  N +IQ LC  G+M  A +        GC VN+V + 
Sbjct: 307 DEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYN 366

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            LI G  +   + +A+ L+D+M     +PD+ TY+ +I    K  +V+ A +L+  M  +
Sbjct: 367 LLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR-TAYNQVIENLCSFGYLEEAG 602
           G+ P +  Y  ++   C+ G +E    L  +M +       AY+ +I   C  G L+ A 
Sbjct: 427 GIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAK 486

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
           ++L  ++      DA T  +++  +   G    A  V  +M     +PD+ +
Sbjct: 487 ELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAV 538



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 206/412 (50%), Gaps = 50/412 (12%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +VY  +L+   K+   +   +V   M+ +GIE     ++ L+ +  + GK + A  V+ M
Sbjct: 186 VVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDM 245

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  + PN++  N  I+ +     + +A+  L++M   G+ P+V+TYN LIKG  D+  
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLE 305

Query: 262 IKDAIKLIDEMPLKG---CSPDKVSYYTVMGYLCKEKRIKE---VRDLMEK---MVN--D 310
           + +A+ L++EM ++G     P+ V++ +V+  LC   R+++   VR +ME+   MVN   
Sbjct: 306 MDEAMWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVT 364

Query: 311 SNLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            NL         ++ +A EL+++M+ +G  PD  TY+ ++ GFC++ ++D+A+ +L  M 
Sbjct: 365 YNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMR 424

Query: 367 HHGCKP----------------------------------NTVSYTAFLNGLCHNGKSLE 392
             G +P                                  + V+Y+  ++G C  G    
Sbjct: 425 DRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKT 484

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A+E++ +  +E  TP+A+TYS+V++   + G +  A  V+++M   GF P     + LIQ
Sbjct: 485 AKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQ 544

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
               +G+++   + ++E + K  A++    ++L        + +  L  L D
Sbjct: 545 GYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPD 596



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 163/335 (48%), Gaps = 19/335 (5%)

Query: 313 LFHDQGRIEEAK------------ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
           + H +GR E A             E  + +  +  + D V+Y  V+   CR G  D+A  
Sbjct: 39  VLHRRGRAEAAACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGA 98

Query: 361 MLQQMY---HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           +L+ M    H  C+PN VSYT  +  LC +  + +A  ++ +        + +TY  ++ 
Sbjct: 99  LLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIR 158

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           GL    ++ +A +++ EM + G  P  V  + L+Q  C+ G+ +   K   E   KG   
Sbjct: 159 GLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEP 218

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +VV +T LI   C+ G  ++A  ++D M     +P+ VTY  +I+ + K G V+EA  ++
Sbjct: 219 DVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVL 278

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC----RTAYNQVIENLC 593
            KM  KG+ P VVTY T+I     V  +++ + LLE+M+  +         +N VI+ LC
Sbjct: 279 KKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLC 338

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
             G + +A ++   +  T    +  T ++L+   L
Sbjct: 339 DIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 235/490 (47%), Gaps = 34/490 (6%)

Query: 102 LLR--SLKPRQIC--------AVLRSQADERVALQF--FYWADRQWRYRHDPIVYYMMLE 149
           LLR  SL+P   C         ++R+   +R+A Q      + R    R D + Y  ++ 
Sbjct: 99  LLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIR 158

Query: 150 ILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAP 209
            L        A  ++  M   GIE     +S L+  Y ++G+  +   V   M +  + P
Sbjct: 159 GLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEP 218

Query: 210 NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
           ++++    I  L    K  KA   ++ M   G+ PNV+TYN LI   C    +K+AI ++
Sbjct: 219 DVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVL 278

Query: 270 DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQ 329
            +M  KG +PD V+Y T++  L     + E   L+E+MV   N+                
Sbjct: 279 KKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVK-------------- 324

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
                  P+VVT+ +V+ G C +G + QA ++   M   GC  N V+Y   + GL    K
Sbjct: 325 -------PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
             +A E+++        P++ TYS+++ G  +  ++  A D++  M  +G  P       
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIP 437

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L+ ++C +G M+ A+    E ++    ++VV ++++I G C+ GDL+ A  LL  +    
Sbjct: 438 LLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG 496

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             PD VTY+ +I+  +K+G +E A  ++ +M + G +P V  + ++I  Y   G +  +L
Sbjct: 497 LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVL 556

Query: 570 KLLEKMLSKQ 579
           +L+ +M++K 
Sbjct: 557 ELIREMITKN 566



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 221/472 (46%), Gaps = 29/472 (6%)

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
           + RAG L  AM   S+    A  PN +     +  L       +A+  L  M+ AG+  +
Sbjct: 93  HDRAGALLRAM---SLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRAD 149

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           V+TY  LI+G CD   +  A++L+ EM   G  P+ V Y +++   CK            
Sbjct: 150 VVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCK------------ 197

Query: 306 KMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                       GR E+  ++  +MS+ G  PDVV YT +++  C+VG+  +A  ++  M
Sbjct: 198 -----------SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMM 246

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G +PN V+Y   +N +C  G   EA  ++    E+   P+ +TY+ ++ GL    ++
Sbjct: 247 VRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEM 306

Query: 426 SEACDVVREMV--KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
            EA  ++ EMV  K    P  V  N +IQ LC  G+M  A +        GC VN+V + 
Sbjct: 307 DEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYN 366

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            LI G  +   + +A+ L+D+M     +PD+ TY+ +I    K  +V+ A +L+  M  +
Sbjct: 367 LLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR-TAYNQVIENLCSFGYLEEAG 602
           G+ P +  Y  ++   C+ G +E    L  +M +       AY+ +I   C  G L+ A 
Sbjct: 427 GIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAK 486

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
           ++L  ++      DA T  +++  +   G    A  V  +M     +PD+ +
Sbjct: 487 ELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAV 538



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 206/412 (50%), Gaps = 50/412 (12%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +VY  +L+   K+   +   +V   M+ +GIE     ++ L+ +  + GK + A  V+ M
Sbjct: 186 VVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDM 245

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  + PN++  N  I+ +     + +A+  L++M   G+ P+V+TYN LIKG  D+  
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLE 305

Query: 262 IKDAIKLIDEMPLKG---CSPDKVSYYTVMGYLCKEKRIKE---VRDLMEK---MVN--D 310
           + +A+ L++EM ++G     P+ V++ +V+  LC   R+++   VR +ME+   MVN   
Sbjct: 306 MDEAMWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVT 364

Query: 311 SNLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            NL         ++ +A EL+++M+ +G  PD  TY+ ++ GFC++ ++D+A+ +L  M 
Sbjct: 365 YNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMR 424

Query: 367 HHGCKP----------------------------------NTVSYTAFLNGLCHNGKSLE 392
             G +P                                  + V+Y+  ++G C  G    
Sbjct: 425 DRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKT 484

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A+E++ +  +E  TP+A+TYS+V++   + G +  A  V+++M   GF P     + LIQ
Sbjct: 485 AKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQ 544

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
               +G+++   + ++E + K  A++    ++L        + +  L  L D
Sbjct: 545 GYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPD 596



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 163/335 (48%), Gaps = 19/335 (5%)

Query: 313 LFHDQGRIEEAK------------ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
           + H +GR E A             E  + +  +  + D V+Y  V+   CR G  D+A  
Sbjct: 39  VLHRRGRAEAAACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGA 98

Query: 361 MLQQMY---HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           +L+ M    H  C+PN VSYT  +  LC +  + +A  ++ +        + +TY  ++ 
Sbjct: 99  LLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIR 158

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           GL    ++ +A +++ EM + G  P  V  + L+Q  C+ G+ +   K   E   KG   
Sbjct: 159 GLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEP 218

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +VV +T LI   C+ G  ++A  ++D M     +P+ VTY  +I+ + K G V+EA  ++
Sbjct: 219 DVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVL 278

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC----RTAYNQVIENLC 593
            KM  KG+ P VVTY T+I     V  +++ + LLE+M+  +         +N VI+ LC
Sbjct: 279 KKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLC 338

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
             G + +A ++   +  T    +  T ++L+   L
Sbjct: 339 DIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 231/455 (50%), Gaps = 19/455 (4%)

Query: 138 RHDPIVYYM--MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLR 193
            H P ++    +L  L K    + A    + M  +GI+  PE F++  L+  +S   +L 
Sbjct: 48  NHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQ--PEMFTFNILINCFSHLCQLN 105

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  +++ + K    P+ +  NT +  L +  K+ +AL F + +       + ++Y  LI
Sbjct: 106 FAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLI 165

Query: 254 KGYCDLHRIKDAIKLIDEMP-LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----- 307
            G C     + A++L+ ++  L    PD + Y  ++   CK+K + +  DL  +M     
Sbjct: 166 NGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKI 225

Query: 308 ----VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
               V  ++L +     G+++EA  L+N+MS     P+V T+  +++G C+ GE+ +A  
Sbjct: 226 YPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATS 285

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +L  M   G +PN V+YT+ ++G     +  +A+ + NT      TPN  +YSV+++GL 
Sbjct: 286 VLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLC 345

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +   + EA  + +EM  K   P  V  + LI  LC+ G++      + E  N+G   N++
Sbjct: 346 KNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANII 405

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + SL+ G C+   +++A++LL  M      PD  TYTT++D L KNGR+++A  +   +
Sbjct: 406 TYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDL 465

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           L KG    +  Y  +I+  C+ G  ++ L LL +M
Sbjct: 466 LCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQM 500



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 212/404 (52%), Gaps = 26/404 (6%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAA-VAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           ++  L+    ++G+ R A+ +L  ++    V P++++    I        +  A      
Sbjct: 160 SYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSE 219

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M +  I PNV+T+N LI G+C + ++K+A+ L++EM L   +P+  ++  ++  LCKE  
Sbjct: 220 MIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKE-- 277

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                                G +++A  +++ M + G  P+VVTYT++++G+  V E++
Sbjct: 278 ---------------------GEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVN 316

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +AK +   +   G  PN  SY+  +NGLC N    EA ++      +  TPN +TYS ++
Sbjct: 317 KAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLI 376

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            GL + G++S+  D++ E+  +G     +  N L+  LC+  ++D A   + +  ++G  
Sbjct: 377 DGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQ 436

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV-TYTTIIDALSKNGRVEEATE 535
            ++  +T+L+ G C+ G L++A  +  D+ LCK  P  +  YT +I+ L K G  +EA  
Sbjct: 437 PDMSTYTTLVDGLCKNGRLKDAQRIYQDL-LCKGYPLNIRMYTVMINGLCKEGFFDEALS 495

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           L+ +M   G +P  VTY T+I    +  +    +KLL +M++++
Sbjct: 496 LLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARE 539



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 240/491 (48%), Gaps = 19/491 (3%)

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
            P +   N  +  LV  N    A+ F ++M+L GI P + T+N LI  +  L ++  A  
Sbjct: 50  TPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFS 109

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH-DQ--------- 317
           ++ ++   G  PD V+  T++  LC   ++KE  +  + ++     FH DQ         
Sbjct: 110 MVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKR--FHLDQVSYGTLING 167

Query: 318 ----GRIEEAKELVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
               G    A +L+ ++  +  + PDV+ YTA+++ FC+   +  A  +  +M      P
Sbjct: 168 LCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYP 227

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N V++ + + G C  G+  EA  ++N        PN  T+++++ GL +EG++ +A  V+
Sbjct: 228 NVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVL 287

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             M+K+G  P  V    L+       +++ AK        +G   NV +++ +I G C+ 
Sbjct: 288 SVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKN 347

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
             ++EA+ L  +M+L    P+TVTY+++ID L K+GR+ +  +L+ ++ ++G    ++TY
Sbjct: 348 KMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITY 407

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
            ++++  C+  +V+  + LL KM  +  Q   + Y  +++ LC  G L++A +I   +L 
Sbjct: 408 NSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLC 467

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                +     V++     +G    A  +  +M +   +PD    + +   L    K+ +
Sbjct: 468 KGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGK 527

Query: 671 ADTLMLRFVER 681
           A  L+   + R
Sbjct: 528 AVKLLREMIAR 538



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 193/414 (46%), Gaps = 41/414 (9%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            + R ALQ     +     R D I+Y  +++   K KL   A  +   M  + I      
Sbjct: 172 GETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVT 231

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+  +   G+L+ A+ +L+ M    V PN+   N  I  L    ++ KA   L  M 
Sbjct: 232 FNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMI 291

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G+ PNV+TY  L+ GY  +  +  A  + + + L+G +P+  SY  ++  LCK K + 
Sbjct: 292 KQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMV- 350

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                                 +EA +L  +M      P+ VTY+++++G C+ G +   
Sbjct: 351 ----------------------DEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDV 388

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             ++ ++ + G   N ++Y + LNGLC N +  +A  ++   ++E   P+  TY+ ++ G
Sbjct: 389 WDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDG 448

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEI---NLLIQSLCREGKMDGAKKFMQECLNKGC 475
           L + G+L +A  + ++++ KG+   P+ I    ++I  LC+EG  D A   + +  + GC
Sbjct: 449 LCKNGRLKDAQRIYQDLLCKGY---PLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGC 505

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL----C--------KKDPDTVTY 517
             + V + +LI    +     +A+ LL +M      C        KKD DT +Y
Sbjct: 506 MPDAVTYETLISALFKNNKNGKAVKLLREMIARESDCSGKEQSREKKDKDTSSY 559


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 221/486 (45%), Gaps = 25/486 (5%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           + M+L  + K K    A  + + M  RGI       S L+  Y   G +  A  VL M+ 
Sbjct: 81  FNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVL 140

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           K     N +   T +  L +  ++ KAL F + +   G   + +TY  LI G C +   +
Sbjct: 141 KRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTR 200

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
           +A +L+ +M  +   P+ V Y  ++  LCK+  + E RDL   +V         GR    
Sbjct: 201 EAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVV---------GR---- 247

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
                     G  PDV TYT +++GFC +G+  +  ++L  M       N  +Y   ++ 
Sbjct: 248 ----------GIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDA 297

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           LC  G   +A +M N   E    P+ +T++ +M G      + EA  +     + G  P 
Sbjct: 298 LCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPD 357

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
               N+LI   C+  ++D A     +   K  A N+V ++SLI G C+ G +  A  L  
Sbjct: 358 VWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFS 417

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
            ++     P+ +TY  ++DAL K   V++A EL   M  +GL P V +Y  +I+ YC+  
Sbjct: 418 AIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSK 477

Query: 564 RVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           R+++ + L E+M  +        YN +I+ LC  G +  A ++   +       D  T +
Sbjct: 478 RIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYN 537

Query: 622 VLVESY 627
           +L +++
Sbjct: 538 ILFDAF 543



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 208/445 (46%), Gaps = 25/445 (5%)

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           P+++  N  +  +V       A+   ++M L GITP+++T + LI  YC L  +  A  +
Sbjct: 76  PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVN 328
           +  +  +G   + ++  T+M  LC      EVR  +E        FHD         +V 
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCING---EVRKALE--------FHDS--------VVA 176

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           Q    G + D VTY  ++NG C++G   +A ++L +M     +PN V Y   ++GLC +G
Sbjct: 177 Q----GFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDG 232

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              EAR++ +        P+  TY+ ++HG    G+  E   ++ +MV +         N
Sbjct: 233 LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYN 292

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           +LI +LC++G +  A       + +G   ++V F +L+ G+C   D+ EA  L D    C
Sbjct: 293 ILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAEC 352

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD  +Y  +I    KN R++EA  L  KM  K L P +VTY ++I   C+ GR+   
Sbjct: 353 GITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYA 412

Query: 569 LKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            +L   +           YN +++ LC    +++A ++   +       + S+ ++L+  
Sbjct: 413 WELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILING 472

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPD 651
           Y        A  +   M  RNL+PD
Sbjct: 473 YCKSKRIDEAMNLFEEMHRRNLVPD 497



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 166/356 (46%), Gaps = 27/356 (7%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           R + ++Y M+++ L K  L   A+ +   +  RGI+  P+ F+Y  L+  +   G+ R  
Sbjct: 215 RPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGID--PDVFTYTCLIHGFCGLGQWREV 272

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +L  M    V  N+   N  I  L     L KA      M   G  P+++T+N L+ G
Sbjct: 273 TRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSG 332

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           YC  + + +A KL D     G +PD  SY  ++   CK                      
Sbjct: 333 YCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNN-------------------- 372

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
              RI+EA  L N+M+     P++VTY+++++G C+ G +  A ++   ++  G  PN +
Sbjct: 373 ---RIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVI 429

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y   L+ LC      +A E+ N   E   TPN  +Y+++++G  +  ++ EA ++  EM
Sbjct: 430 TYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEM 489

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
            ++   P  V  N LI  LC+ G++  A +      + G  V+V+ +  L   F +
Sbjct: 490 HRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSK 545



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 174/389 (44%), Gaps = 27/389 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + Y  ++  L K  L + A  +L  M   G   RP    Y M+     + G +  A  
Sbjct: 182 DEVTYGTLINGLCKIGLTREAFELLHKM--EGQVVRPNVVIYNMIVDGLCKDGLVTEARD 239

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           + S +    + P++      IH      +  +  R L  M    +  NV TYN LI   C
Sbjct: 240 LYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALC 299

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               +  A  + + M  +G  PD V++ T+M   C                    L++D 
Sbjct: 300 KKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYC--------------------LYND- 338

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
             + EA++L +  ++ G  PDV +Y  ++ G+C+   +D+A  +  +M +    PN V+Y
Sbjct: 339 --VVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTY 396

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           ++ ++GLC +G+   A E+ +   +   +PN ITY++++  L +   + +A ++   M +
Sbjct: 397 SSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFE 456

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P     N+LI   C+  ++D A    +E   +    + V +  LI G C+ G +  
Sbjct: 457 RGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISH 516

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           A  L + M+      D +TY  + DA SK
Sbjct: 517 AWELFNVMHDGGPPVDVITYNILFDAFSK 545



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 139/311 (44%), Gaps = 4/311 (1%)

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           I++A  L  ++  M  +P VV +  ++    ++     A  + +QM   G  P+ V+ + 
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +N  CH G    A  ++    +  +  NAIT + +M GL   G++ +A +    +V +G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           F    V    LI  LC+ G    A + + +   +    NVV +  ++ G C+ G + EA 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            L  D+     DPD  TYT +I      G+  E T L+  M+ + +   V TY  +I   
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 560 CQ---VGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           C+   +G+  D+  L+ +   +    T +N ++   C +  + EA K+           D
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVT-FNTLMSGYCLYNDVVEARKLFDTFAECGITPD 357

Query: 617 ASTCHVLVESY 627
             + ++L+  Y
Sbjct: 358 VWSYNILIIGY 368



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 3/282 (1%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ + +++++  + +      A  + ++M  +G  P+ V +++LI   C  G M  A   
Sbjct: 76  PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           +   L +G  +N +  T++++G C  G++ +AL   D +       D VTY T+I+ L K
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTA 584
            G   EA EL+ KM  + + P VV Y  ++   C+ G V +   L   ++ +        
Sbjct: 196 IGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFT 255

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           Y  +I   C  G   E  ++L  ++      +  T ++L+++   KG+   A+ +   M 
Sbjct: 256 YTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMI 315

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
            R   PDL     +     L     EA  L   F E G I P
Sbjct: 316 ERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECG-ITP 356



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 20/270 (7%)

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + +A  +   ++     P+ VE N+++ S+ +      A    ++   +G   ++V  + 
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI  +C  G +  A S+L  +       + +T TTI+  L  NG V +A E    ++++G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEA 601
            +   VTY T+I+  C++G   +  +LL KM   Q  R     YN +++ LC  G + EA
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKM-EGQVVRPNVVIYNMIVDGLCKDGLVTEA 237

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL--------K 653
             +   V+      D  T   L+  +   G      ++ C M +RN+  ++         
Sbjct: 238 RDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDA 297

Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERGH 683
           LCKK      + GK+ +   LM   +ERG 
Sbjct: 298 LCKKG-----MLGKAHDMRNLM---IERGQ 319



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 55/121 (45%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y +ML+ L K +L   A  +  LM  RG+     +++ L+  Y ++ ++  AM +   
Sbjct: 429 ITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEE 488

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  + P+ +  N  I  L    +++ A      M   G   +V+TYN L   +  +  
Sbjct: 489 MHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQH 548

Query: 262 I 262
           +
Sbjct: 549 V 549


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 171/702 (24%), Positives = 277/702 (39%), Gaps = 172/702 (24%)

Query: 159 GAKRVLRLMARRGIECRPE---AFSYLMVAYSRAGKLRNAM----YVLSMMQKAA----- 206
           G    L+L        RP    AF++L+ A SR+   R+       V+S+  +       
Sbjct: 29  GLGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYI 88

Query: 207 -VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            VAPN    +  I        L         +   G   + +  N L+ G CD  R+ +A
Sbjct: 89  KVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEA 148

Query: 266 IK-LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------- 311
           +  L+  MP  GC PD VSY  ++  LC EKR +E  +L+  M +D              
Sbjct: 149 MDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYST 208

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             N F  +G++++   L  +M   G  PDVVTYT V++G C+    D+A+ + QQM  +G
Sbjct: 209 VINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNG 268

Query: 370 CKPNT-----------------------------------VSYTAFLNGLCHNGKSLEAR 394
            KPN                                     +Y + LN LC NG+  EAR
Sbjct: 269 VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREAR 328

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSE--------------------------- 427
              ++   +   P+  TY +++HG   +G LSE                           
Sbjct: 329 FFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAY 388

Query: 428 --------ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
                   A D+  +M ++G  P  V    LI +LC+ G++D A+    + +N+G   ++
Sbjct: 389 AKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDI 448

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMY-----------------LCKKD----------- 511
           V F+SL+ G C     E+   L  +M                  LCK+            
Sbjct: 449 VVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDS 508

Query: 512 -------PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
                  PD ++Y T+ID     G ++EA++L+  M+S GL P   +Y T++H YC+ GR
Sbjct: 509 IECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGR 568

Query: 565 VEDLLKLLEKMLSK-----------------QKCRTA--------------------YNQ 587
           ++       KMLS                  Q  R +                    YN 
Sbjct: 569 IDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNI 628

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           ++  LC    ++EA K+   +     + +  T ++++ + L  G    A  +   +    
Sbjct: 629 ILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 688

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
           L+ ++   + V E LI EG  EE D+L    +E+    P S+
Sbjct: 689 LVQNVVTYRLVVENLIEEGSLEEFDSL-FSAMEKNGTAPNSQ 729



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/565 (25%), Positives = 242/565 (42%), Gaps = 23/565 (4%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           RQ     D + Y  +++ L K      A+     M   G+      FS L+       K 
Sbjct: 405 RQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKW 464

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
                +   M    + PN++  NT +  L    ++ +  R ++ ++  G+ P+V++YN L
Sbjct: 465 EKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTL 524

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS- 311
           I G+C    I +A KL++ M   G  PD  SY T++   CK  RI        KM+++  
Sbjct: 525 IDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGI 584

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                        LF  + R  EAKEL   M   G   D+ TY  ++NG C+   +D+A 
Sbjct: 585 TPGVVTYNTILHGLFQTK-RFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAI 643

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           KM Q +   G + N +++   +  L   G+  +A ++           N +TY +V+  L
Sbjct: 644 KMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENL 703

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
             EG L E   +   M K G  P    +N L++ L   G +  A  ++ +   +  +V  
Sbjct: 704 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEA 763

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
              + LI  F        A SL     +  +   +         + K  R+++A  L  +
Sbjct: 764 STTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSAL-------IKKARRIDDAYSLFRE 816

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGY 597
           ML KGL P VVTY T++H   Q GR  +  +L   M++   Q     YN ++  LC    
Sbjct: 817 MLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNC 876

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
           ++EA K+   +     + +  T ++++ + L  G    A  +   +    L+PD+   + 
Sbjct: 877 VDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRL 936

Query: 658 VSERLILEGKSEEADTLMLRFVERG 682
           V+E LI EG  EE D L L   + G
Sbjct: 937 VAENLIEEGSLEEFDGLFLTMEKSG 961



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 164/715 (22%), Positives = 289/715 (40%), Gaps = 161/715 (22%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGI-ECRPEAFSYLMV--AYSRAGKLRNAM 196
           D + Y ++L+ L   K  + A  +L +MA   +  C P   SY  V   +   G++    
Sbjct: 164 DTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPY 223

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   M    + P+++   T I  L       +A    ++M   G+ PN+ TYNCLI GY
Sbjct: 224 NLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGY 283

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR-------------------- 296
             + + K+ +++++EM   G  P+  +Y +++ YLCK  R                    
Sbjct: 284 LSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSV 343

Query: 297 ---------------IKEVRDLMEKMVNDS--------NLFHDQ----GRIEEAKELVNQ 329
                          + E+ DL+  MV +         N+F       G I++A ++ N+
Sbjct: 344 TTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNK 403

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC---- 385
           M Q G  PD V+Y A+++  C++G +D A+    QM + G  P+ V +++ + GLC    
Sbjct: 404 MRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDK 463

Query: 386 -------------------------------HNGKSLEAREMINTSEEEWWTPNAITYSV 414
                                            G+ +E + ++++ E     P+ I+Y+ 
Sbjct: 464 WEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNT 523

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ G    G + EA  ++  MV  G  P     N L+   C+ G++D A    ++ L+ G
Sbjct: 524 LIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNG 583

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEA----LSLLD-----DMY--------LCKKD------ 511
               VV + +++ G  Q     EA    L++++     D+Y        LCK +      
Sbjct: 584 ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAI 643

Query: 512 ------------PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
                        + +T+  +I AL K GR E+A +L   + + GLV  VVTYR V+   
Sbjct: 644 KMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENL 703

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRTA-----YNQVIENLCSFGYLEEAGKILGKVLRTASK 614
            + G +E+   L   M   +K  TA      N ++  L   G +  AG  L K+      
Sbjct: 704 IEEGSLEEFDSLFSAM---EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFS 760

Query: 615 ADASTCHVLVESYLN-------KGIP----LL-----------------AYKVACRMFNR 646
            +AST  +L+  + +       K +P    +L                 AY +   M  +
Sbjct: 761 VEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMK 820

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVFLNS 701
            L PD+     +   L   G+  EA  L L       I  +++ ++    + LN 
Sbjct: 821 GLTPDVVTYNTILHGLFQTGRFSEAKELYLSM-----INSRTQMNIYTYNIILNG 870



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 224/544 (41%), Gaps = 67/544 (12%)

Query: 139  HDPIVYYMMLEILSKTKLCQGAKRVLRLMARR---GIEC---RPEAFSY--LMVAYSRAG 190
            H  IV++        T LC   K    +  +R    IEC   RP+  SY  L+  +  AG
Sbjct: 480  HPNIVFF-------NTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAG 532

Query: 191  KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
             +  A  +L  M    + P+    NT +H      ++  A     +M   GITP V+TYN
Sbjct: 533  TIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYN 592

Query: 251  CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
             ++ G     R  +A +L   M   G   D  +Y  ++  LCK   + E   + + + + 
Sbjct: 593  TILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSK 652

Query: 311  S------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                               GR E+A +L   +   G + +VVTY  VV      G L++ 
Sbjct: 653  GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEF 712

Query: 359  KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM-- 416
              +   M  +G  PN+    A +  L H G    A   ++  +E  ++  A T S+++  
Sbjct: 713  DSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISI 772

Query: 417  --------HG------------------LRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
                    H                   +++  ++ +A  + REM+ KG  P  V  N +
Sbjct: 773  FSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTI 832

Query: 451  IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
            +  L + G+   AK+     +N    +N+  +  ++ G C+   ++EA  +     LC K
Sbjct: 833  LHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQS--LCSK 890

Query: 511  --DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
                + +T+  +I AL K GR E+A +L   + + GLVP VVTYR V     + G +E+ 
Sbjct: 891  GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEF 950

Query: 569  LKLLEKMLSKQKCRTA-----YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
              L    L+ +K  T       N ++  L   G +  AG  L K+       +AST   L
Sbjct: 951  DGLF---LTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSEL 1007

Query: 624  VESY 627
            +  +
Sbjct: 1008 ISLF 1011


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 155/609 (25%), Positives = 264/609 (43%), Gaps = 29/609 (4%)

Query: 78  VREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRY 137
           V +VC ++E    W P LE  L  L     P  +  VL+   D   A+ +F WA++Q   
Sbjct: 63  VDDVCCILE-SGPWGPTLENSLSALGEKPLPELVIGVLKRLKDANTAVNYFQWAEKQTEK 121

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
            H P  Y  +L ++++       +R+L  M+  G          L+    ++ KLR A  
Sbjct: 122 VHCPEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFD 181

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           ++  M+K    P        I  L    +    L    +MQ  G   NV  +  LI+ + 
Sbjct: 182 IIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFA 241

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              R+  A+ L+DEM       D V Y   +    K  ++    D+  K       FH  
Sbjct: 242 REGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKV----DMSWK------FFH-- 289

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
                      +M   G +PD VTYT+++   C+   LD+A ++ +Q+  +   P   +Y
Sbjct: 290 -----------EMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAY 338

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              + G    GK  EA  ++   + +   P+ I Y+ ++  L ++ ++ EA  +  EM K
Sbjct: 339 NTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-K 397

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +   P     N+LI  LCREGK++ A +   +    G   NV+    +I   C+   LEE
Sbjct: 398 RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEE 457

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A S+ + M      P+ VT++++ID L K GRV++A  L  KML  G VP  + Y ++I 
Sbjct: 458 ACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIR 517

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
            + + GR ED  K+ ++M+    C    T  N  ++ +   G  E+   +  ++      
Sbjct: 518 SFFKCGRKEDGHKIYKEMV-HTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFI 576

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            DA +  +L+   +  G+    Y++   M  +  + D      V +     GK  +A  L
Sbjct: 577 PDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQL 636

Query: 675 MLRFVERGH 683
           +     +GH
Sbjct: 637 LEEMKVKGH 645



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 225/499 (45%), Gaps = 15/499 (3%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  +L  L K +  + A R+   M R  +   P  ++ L+    R GKL  A+ +   
Sbjct: 371 IAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVP-TYNILIDMLCREGKLNAALEIRDD 429

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M++A + PN+L  N  I  L    KL +A    E M     TPN +T++ LI G     R
Sbjct: 430 MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGR 489

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NL 313
           + DA  L ++M   G  P  + Y +++    K  R ++   + ++MV+          N 
Sbjct: 490 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 549

Query: 314 FHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           + D     G  E+ + L  +++  G IPD  +Y+ +++G  + G  ++  ++   M   G
Sbjct: 550 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 609

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
           C  +T +Y A ++G C +GK  +A +++   + +   P  +TY  V+ GL +  +L EA 
Sbjct: 610 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY 669

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            +  E    G     V  + LI    + G++D A   M+E + KG   NV  +  L+   
Sbjct: 670 MLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 729

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
            +  ++ EAL     M   K  P+ +TY+ +I+ L +  +  +A     +M   GL P  
Sbjct: 730 VKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNT 789

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGK 607
           +TY T+I    + G + +   L  +  +        +YN +IE L S     +A  +  +
Sbjct: 790 ITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 849

Query: 608 VLRTASKADASTCHVLVES 626
                      TC VL+++
Sbjct: 850 TRLKGCNIHTKTCVVLLDA 868



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/304 (18%), Positives = 131/304 (43%), Gaps = 23/304 (7%)

Query: 128 FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS 187
            ++A ++     D   Y  +++   K+     A ++L  M  +G       +  ++   +
Sbjct: 601 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLA 660

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           +  +L  A  +    +   +  N+++ ++ I       ++ +A   +E +   G+TPNV 
Sbjct: 661 KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 720

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           T+NCL+        I +A+     M    C P++++Y  ++  LC+ ++           
Sbjct: 721 TWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKF---------- 770

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
            N + +F              +M ++G  P+ +TYT +++G  + G + +A  +  +   
Sbjct: 771 -NKAFVFW------------QEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKA 817

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +G  P++ SY A + GL    K+++A  +   +  +    +  T  V++  L +   L +
Sbjct: 818 NGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQ 877

Query: 428 ACDV 431
           A  V
Sbjct: 878 AAIV 881



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 109/267 (40%), Gaps = 26/267 (9%)

Query: 139 HDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           H P V  Y  +++ L+K      A  +       GI+     +S L+  + + G++  A 
Sbjct: 645 HPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAY 704

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            ++  + +  + PN+   N  +  LV   ++ +AL   + M+     PN +TY+ LI G 
Sbjct: 705 LIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGL 764

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C + +   A     EM   G  P+ ++Y T++  L K                       
Sbjct: 765 CRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAK----------------------- 801

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            G I EA  L ++    G IPD  +Y A++ G     +   A  + ++    GC  +T +
Sbjct: 802 AGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKT 861

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEE 403
               L+ L H  + LE   ++    +E
Sbjct: 862 CVVLLDAL-HKAECLEQAAIVGAVLKE 887


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 189/348 (54%), Gaps = 23/348 (6%)

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           + +L  M+  G+ P+ + Y  +I G+C    + DA+++ DEM   GC PD V+Y T++  
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LCKE+R+                        +A+ L+N+M + G  PD+ T+T +++G+C
Sbjct: 61  LCKERRLL-----------------------DAEGLLNEMRERGVPPDLCTFTTLIHGYC 97

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
             G+LD+A ++   M +   +P+ V+Y   ++G+C  G   +A ++ +        PN +
Sbjct: 98  IEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 157

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TYS+++     +G++ +A   + EM+ KG  P  +  N +I+  CR G +   +KF+Q+ 
Sbjct: 158 TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 217

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           +    + +++ + +LI G+ ++  + +A  LL+ M   K  PD VTY  +I+  S +G V
Sbjct: 218 MVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNV 277

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           +EA  +  KM +KG+ P   TY ++I+ +   G  ++  +L ++ML +
Sbjct: 278 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 325



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 167/329 (50%), Gaps = 4/329 (1%)

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +M   G +PD V YT V+ GFCR G +  A ++  +M   GC P+ V+Y   LNGLC   
Sbjct: 6   EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           + L+A  ++N   E    P+  T++ ++HG   EGKL +A  +   M+ +   P  V  N
Sbjct: 66  RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 125

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            LI  +CR+G +D A     +  ++    N V ++ LI   C+KG +E+A   LD+M   
Sbjct: 126 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 185

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P+ +TY +II    ++G V +  + + KM+   + P ++TY T+IH Y +  ++ D 
Sbjct: 186 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 245

Query: 569 LKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            KLL  M+ K+K +     YN +I      G ++EAG I  K+     + D  T   ++ 
Sbjct: 246 FKLL-NMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 304

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            ++  G    A+++   M  R   PD K 
Sbjct: 305 GHVTAGNSKEAFQLHDEMLQRGFAPDDKF 333



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 179/348 (51%), Gaps = 25/348 (7%)

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQM 330
           EM   G  PD V Y  V+G  C+                        G + +A  + ++M
Sbjct: 6   EMRCFGLVPDGVIYTMVIGGFCR-----------------------AGLMSDALRVRDEM 42

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              GC+PDVVTY  ++NG C+   L  A+ +L +M   G  P+  ++T  ++G C  GK 
Sbjct: 43  VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 102

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            +A ++ +T   +   P+ +TY+ ++ G+ R+G L +A D+  +M  +  FP  V  ++L
Sbjct: 103 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 162

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I S C +G+++ A  F+ E +NKG   N++ + S+I+G+C+ G++ +    L  M + K 
Sbjct: 163 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 222

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            PD +TY T+I    K  ++ +A +L+  M  + + P VVTY  +I+ +   G V++   
Sbjct: 223 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 282

Query: 571 LLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           + EKM +K  +  R  Y  +I    + G  +EA ++  ++L+     D
Sbjct: 283 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 166/323 (51%), Gaps = 2/323 (0%)

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L++M   G  P+ V YT  + G C  G   +A  + +        P+ +TY+ +++GL +
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           E +L +A  ++ EM ++G  P       LI   C EGK+D A +     LN+    ++V 
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           + +LI G C++GDL++A  L DDM+  +  P+ VTY+ +ID+  + G+VE+A   + +M+
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLE 599
           +KG++P ++TY ++I  YC+ G V    K L+KM+  +       YN +I        + 
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           +A K+L  + +   + D  T ++L+  +   G    A  +  +M  + + PD      + 
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303

Query: 660 ERLILEGKSEEADTLMLRFVERG 682
              +  G S+EA  L    ++RG
Sbjct: 304 NGHVTAGNSKEAFQLHDEMLQRG 326



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 145/283 (51%), Gaps = 3/283 (1%)

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+ + Y++V+ G  R G +S+A  V  EMV  G  P  V  N L+  LC+E ++  A+ 
Sbjct: 13  VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 72

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            + E   +G   ++  FT+LI G+C +G L++AL L D M   +  PD VTY T+ID + 
Sbjct: 73  LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 132

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-- 583
           + G +++A +L   M S+ + P  VTY  +I  +C+ G+VED    L++M++K       
Sbjct: 133 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 192

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            YN +I+  C  G + +  K L K++      D  T + L+  Y+ +     A+K+   M
Sbjct: 193 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 252

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
               + PD+     +     + G  +EA  +  +   +G I+P
Sbjct: 253 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG-IEP 294



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 161/339 (47%), Gaps = 27/339 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D ++Y M++    +  L   A RV   M   G  C P+  +Y  L+    +  +L +A  
Sbjct: 15  DGVIYTMVIGGFCRAGLMSDALRVRDEMV--GCGCLPDVVTYNTLLNGLCKERRLLDAEG 72

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L+ M++  V P+L    T IH   +  KL KAL+  + M    + P+++TYN LI G C
Sbjct: 73  LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 132

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               +  A  L D+M  +   P+ V+Y  ++   C                       ++
Sbjct: 133 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC-----------------------EK 169

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G++E+A   +++M   G +P+++TY +++ G+CR G + + +K LQ+M  +   P+ ++Y
Sbjct: 170 GQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITY 229

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              ++G     K  +A +++N  E+E   P+ +TY+++++G    G + EA  +  +M  
Sbjct: 230 NTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 289

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
           KG  P       +I      G    A +   E L +G A
Sbjct: 290 KGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFA 328



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 142/303 (46%), Gaps = 23/303 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +L  L K +    A+ +L  M  RG+      F+ L+  Y   GKL  A+ + 
Sbjct: 50  DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 109

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    + P+++  NT I  +     L KA    + M    I PN +TY+ LI  +C+ 
Sbjct: 110 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 169

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            +++DA   +DEM  KG  P+ ++Y +++   C+   + + +  ++KM            
Sbjct: 170 GQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM------------ 217

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                 +VN++S     PD++TY  +++G+ +  ++  A K+L  M     +P+ V+Y  
Sbjct: 218 ------MVNKVS-----PDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 266

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +NG   +G   EA  +      +   P+  TY  +++G    G   EA  +  EM+++G
Sbjct: 267 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 326

Query: 440 FFP 442
           F P
Sbjct: 327 FAP 329


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 152/590 (25%), Positives = 272/590 (46%), Gaps = 64/590 (10%)

Query: 160 AKRVLRLMAR-RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
           A++VLR M R  G+     A+  L+  Y R  K+ +A+ +   M    +  NL ICN  I
Sbjct: 307 AEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALI 366

Query: 219 HVLVVGNKLAKALRFLERMQ-----------------------------------LAGIT 243
           +      ++++A R L RM                                      GI 
Sbjct: 367 NGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQ 426

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE----KRIKE 299
            NV+T+N L+KG C +   +DA+ +   M  +G +PD+VSY T++  L K     + +  
Sbjct: 427 SNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALAL 486

Query: 300 VRDLMEKMVNDS--------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
             D++ +    S        N F    ++ EA+E  N+M ++G  PD VTY  +++G+C+
Sbjct: 487 WNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCK 546

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
           +G +++A K+ ++M      P+   Y + + GL  + K+ E  ++++    +  +PN +T
Sbjct: 547 LGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVT 606

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y  ++ G   EG+L +A     +M++KGF P  +  + ++ SL R G++D A   +Q+ +
Sbjct: 607 YGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMV 666

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
           N    ++   F  L +      D ++    LD+       P++V Y   I  L K+G+V+
Sbjct: 667 NLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVD 726

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVI 589
           +A ++   +L +G  P   TY T+IH Y   G V D   L ++ML +        YN +I
Sbjct: 727 DAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALI 786

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
             LC  G L+ A K+  K+       +  + ++L++ Y   G    A  +  +M    + 
Sbjct: 787 NGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGIS 846

Query: 650 PDL--------KLCKK----VSERLILEGKSEEADTLMLRFVE--RGHIQ 685
           P L          CK+     +  L+ E +   AD  + +FV+   GH++
Sbjct: 847 PSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVK 896



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/602 (23%), Positives = 273/602 (45%), Gaps = 36/602 (5%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR--- 169
            +L+ + +   +L FF  A +Q  +R +   +  ++ ILS+ ++    +  L  +     
Sbjct: 66  VLLKLKFNPIASLHFFKLASKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNELVTPSK 125

Query: 170 ----------------RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLI 213
                              +  P  F  ++  Y   G ++NA++V   M K    P+L  
Sbjct: 126 NNYSSLVVWNELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRS 185

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           CN  +  LV   + + A+   + +   GI P+V T + ++  YC    +  A+  + EM 
Sbjct: 186 CNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMD 245

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRI 320
             G   + V+Y +++   C      E  +++ K++ +  +  +             Q ++
Sbjct: 246 YLGFELNVVTYNSLIDG-CVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKL 304

Query: 321 EEAKELVNQMSQM-GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           EEA++++ +M +  G + D   Y  +++G+CRV ++D A ++  +M + G + N     A
Sbjct: 305 EEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNA 364

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +NG C NG+  EA  ++    +    P + +YS +M G  REG +++A  V  EM++ G
Sbjct: 365 LINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVG 424

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
                V  N L++ LCR G  + A       L +G   + V++ +L+    + G+   AL
Sbjct: 425 IQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRAL 484

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
           +L +D+        T  + T+I+   K  ++ EA E   +M   G  P  VTYRT+I  Y
Sbjct: 485 ALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGY 544

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C++G VE+  K+ EKM  +    +   YN +I  L       E   +L ++       + 
Sbjct: 545 CKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNV 604

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLR 677
            T   L+  + ++G    A+     M  +   P++ +C K+   L   G+ +EA+ L+ +
Sbjct: 605 VTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK 664

Query: 678 FV 679
            V
Sbjct: 665 MV 666



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 221/490 (45%), Gaps = 49/490 (10%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
            W    +   Y  +++   +  L   A  V   M R GI+      + L+    R G   
Sbjct: 387 DWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFE 446

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
           +A++V  +M K  V P+ +   T + +L    +  +AL     +   G   +   +N +I
Sbjct: 447 DALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMI 506

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-- 311
            G+C + ++ +A +  + M   G  PD V+Y T++   CK   ++E   + EKM  ++  
Sbjct: 507 NGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAIL 566

Query: 312 -----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                       LF  + +  E  +L+++M   G  P+VVTY  ++ G+C  G LD+A  
Sbjct: 567 PSIELYNSLIGGLFKSK-KTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFT 625

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA----REMINT----------------- 399
               M   G  PN +  +  ++ L   G+  EA    ++M+N                  
Sbjct: 626 AYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADD 685

Query: 400 --------------SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
                         S + +  PN++ Y++ + GL + GK+ +A  +   ++ +GF P   
Sbjct: 686 GNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNF 745

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               LI      G ++ A     E L +G A N++ + +LI G C+ G+L+ A  L D +
Sbjct: 746 TYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKL 805

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
           +L    P+ ++Y  +ID   KNG   EA +L  KML +G+ P+++TY  +I+ +C+ G +
Sbjct: 806 HLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDM 865

Query: 566 EDLLKLLEKM 575
                LL++M
Sbjct: 866 GKATNLLDEM 875



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 224/481 (46%), Gaps = 47/481 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + +  +L+ L +    + A  V  LM +RG+     ++  L+    + G+   A+ + + 
Sbjct: 430 VTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWND 489

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           +       +    NT I+      K+ +A     RM+  G  P+ +TY  LI GYC L  
Sbjct: 490 ILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGN 549

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSN 312
           +++A K+ ++M  +   P    Y +++G L K K+ +EV DL+ +M         V    
Sbjct: 550 VEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGT 609

Query: 313 LFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH-- 367
           L     D+GR+++A      M + G  P+V+  + +V+   R+G +D+A  +LQ+M +  
Sbjct: 610 LIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLD 669

Query: 368 ----HG-----------------------------CKPNTVSYTAFLNGLCHNGKSLEAR 394
               HG                               PN+V Y   + GLC +GK  +A+
Sbjct: 670 VFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAK 729

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           ++ ++     ++P+  TY  ++HG    G +++A  +  EM+K+G  P  +  N LI  L
Sbjct: 730 KIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGL 789

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G +D A+K   +   KG A NV+++  LI G+C+ G+  EAL L + M      P  
Sbjct: 790 CKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSL 849

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           +TY+ +I    K G + +AT L+ +M        +  +  ++  + + G V+ + KL   
Sbjct: 850 ITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNM 909

Query: 575 M 575
           M
Sbjct: 910 M 910



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/543 (26%), Positives = 240/543 (44%), Gaps = 25/543 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+ VL+LM  RGI       + L+  Y R  KL  A  VL  M+++     +++   A  
Sbjct: 272 AEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERS---EGMVLDEYAYG 328

Query: 220 VLVVGN----KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
           VL+ G     K+  A+R  + M   G+  N+   N LI GYC   ++ +A +L+  M   
Sbjct: 329 VLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDW 388

Query: 276 GCSPDKVSYYTVMGYLCKE----KRIKEVRDLMEKMVNDSNLFHDQ--------GRIEEA 323
              P+  SY T+M   C+E    K I    +++   +  + + H+         G  E+A
Sbjct: 389 DLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDA 448

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
             + + M + G  PD V+Y  +++   ++GE  +A  +   +   G   +T ++   +NG
Sbjct: 449 LHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMING 508

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
            C   K +EA E  N  +E  + P+ +TY  ++ G  + G + EA  V  +M K+   P+
Sbjct: 509 FCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPS 568

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
               N LI  L +  K       + E   KG + NVV + +LI G+C +G L++A +   
Sbjct: 569 IELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYF 628

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY---- 559
           DM      P+ +  + I+ +L + GR++EA  L+ KM++   V     Y   +H+     
Sbjct: 629 DMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLD-VFLDHGYFDRLHKADDGN 687

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
               ++ D L    K  S       YN  I  LC  G +++A KI   +L      D  T
Sbjct: 688 LDSQKIADTLDESSKSFSLPN-SVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFT 746

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
              L+  Y   G    A+ +   M  R L P++     +   L   G  + A  L  +  
Sbjct: 747 YCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLH 806

Query: 680 ERG 682
            +G
Sbjct: 807 LKG 809



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/504 (24%), Positives = 220/504 (43%), Gaps = 68/504 (13%)

Query: 62  EIRRVVLEEDEFRH-PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQI--CAVLRSQ 118
           E+ RV ++ +   H  L++ +CR+     A+   L      L R + P ++  C +L   
Sbjct: 419 EMLRVGIQSNVVTHNSLLKGLCRV----GAFEDALHVWHLMLKRGVTPDEVSYCTLL--- 471

Query: 119 ADERVALQFFYWADRQWR------YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGI 172
            D    +  F+ A   W       Y      +  M+    K +    A+     M   G 
Sbjct: 472 -DLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGF 530

Query: 173 ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           E  P+  +Y  L+  Y + G +  A  V   M+K A+ P++ + N+ I  L    K  + 
Sbjct: 531 E--PDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREV 588

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           +  L  M L G++PNV+TY  LI G+CD  R+  A     +M  KG +P+ +    ++  
Sbjct: 589 MDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSS 648

Query: 291 LCKEKRIKEVRDLMEKMVN-----------------DSNLFHDQ---------------- 317
           L +  RI E   L++KMVN                 D NL   +                
Sbjct: 649 LYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPN 708

Query: 318 --------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                         G++++AK++ + +   G  PD  TY  +++G+   G ++ A  +  
Sbjct: 709 SVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRD 768

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   G  PN ++Y A +NGLC +G    A+++ +    +   PN I+Y++++ G  + G
Sbjct: 769 EMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNG 828

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
              EA D+  +M+K+G  P+ +  + LI   C++G M  A   + E        N+  F 
Sbjct: 829 NTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFV 888

Query: 484 SLIRGFCQKGDLEEALSLLDDMYL 507
            L+ G  + G++++   L + M++
Sbjct: 889 KLVEGHVKCGEVKKIAKLHNMMHI 912



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 224/500 (44%), Gaps = 69/500 (13%)

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
           LVV N+L   +R  E  +    +P V  ++ ++K YC+   IK+A+ + D M   GC P 
Sbjct: 131 LVVWNEL---VRVFEDFKF---SPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPS 182

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
                           ++    L+  +V        +G    A  + + ++++G +PDV 
Sbjct: 183 ----------------LRSCNRLLSSLVR-------KGESSNAILVYDHINRLGIVPDVF 219

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           T + +VN +C+ G ++ A   +++M + G + N V+Y + ++G    G    A  ++   
Sbjct: 220 TCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLM 279

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK-KGFFPTPVEINLLIQSLCREGK 459
            E     N +T ++++ G  R+ KL EA  V+REM + +G         +LI   CR  K
Sbjct: 280 GERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCK 339

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           MD A +   E LN G  +N+    +LI G+C+ G + EA  LL  M     +P++ +Y+T
Sbjct: 340 MDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYST 399

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED------------ 567
           ++D   + G V +A  +  +ML  G+   VVT+ +++   C+VG  ED            
Sbjct: 400 LMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRG 459

Query: 568 ----------LLKLLEKM-------------LSKQKCRT--AYNQVIENLCSFGYLEEAG 602
                     LL LL KM             L++   R+  A+N +I   C    + EA 
Sbjct: 460 VTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAE 519

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           +   ++     + D  T   L++ Y   G    A+KV  +M    ++P ++L   +   L
Sbjct: 520 ETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGL 579

Query: 663 ILEGKSEEADTLMLRFVERG 682
               K+ E   L+     +G
Sbjct: 580 FKSKKTREVMDLLSEMCLKG 599


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 230/473 (48%), Gaps = 14/473 (2%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           GI       + ++  + R  K   A  VL  + K    P+    NT I  L +  K+++A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           +  ++RM   G  P+V+TYN ++ G C       A+ L+ +M  +    D  +Y T++  
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237

Query: 291 LCKEKRIKEVRDLMEKM----VNDSNLFHDQ--------GRIEEAKELVNQMSQMGCIPD 338
           LC++  I     L ++M    +  S + ++         G+  +   L+  M     +P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V+T+  +++ F + G+L +A ++ ++M   G  PN ++Y   ++G C   +  EA  M++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                  +P+ +T++ ++ G     ++ +   V R + K+G     V  ++L+Q  C+ G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           K+  A++  QE ++ G   +V+ +  L+ G C  G LE+AL + +D+   K D   V YT
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           TII+ + K G+VE+A  L   +  KG+ P V+TY  +I   C+ G + +   LL KM   
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537

Query: 579 QKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
                   YN +I      G L  + K++ ++      ADAS+  ++++  L+
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 213/468 (45%), Gaps = 16/468 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS    A +R  +    +     ++   +A N+   N  I+      K   A   L ++ 
Sbjct: 91  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+  T+N LIKG     ++ +A+ L+D M   GC PD V+Y +++  +C+     
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210

Query: 299 EVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
              DL+ KM  + N+  D              G I+ A  L  +M   G    VVTY ++
Sbjct: 211 LALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           V G C+ G+ +    +L+ M      PN +++   L+     GK  EA E+         
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           +PN ITY+ +M G   + +LSEA +++  MV+    P  V    LI+  C   ++D   K
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             +    +G   N V ++ L++GFCQ G ++ A  L  +M      PD +TY  ++D L 
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
            NG++E+A E+   +    +   +V Y T+I   C+ G+VED   L   +  K  +    
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            Y  +I  LC  G L EA  +L K+    +  +  T + L+ ++L  G
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 212/430 (49%), Gaps = 12/430 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  + + G E     F+ L+      GK+  A+ ++  M +    P+++  N+ ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            +      + AL  L +M+   +  +V TY+ +I   C    I  AI L  EM  KG   
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
             V+Y +++  LCK  +  +   L++ MV+              ++F  +G+++EA EL 
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M   G  P+++TY  +++G+C    L +A  ML  M  + C P+ V++T+ + G C  
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            +  +  ++     +     NA+TYS+++ G  + GK+  A ++ +EMV  G  P  +  
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            +L+  LC  GK++ A +  ++       + +V +T++I G C+ G +E+A +L   +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ +TYT +I  L K G + EA  L+ KM   G  P   TY T+I  + + G +  
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561

Query: 568 LLKLLEKMLS 577
             KL+E+M S
Sbjct: 562 SAKLIEEMKS 571



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 238/492 (48%), Gaps = 25/492 (5%)

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
           +A+ +   M ++   P+L+  +     +    +    L F ++++L GI  N+ T N +I
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
             +C   +   A  ++ ++   G  PD  ++ T++  L  E                   
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE------------------- 171

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
               G++ EA  LV++M + GC PDVVTY ++VNG CR G+   A  +L++M     K +
Sbjct: 172 ----GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             +Y+  ++ LC +G    A  +    E +    + +TY+ ++ GL + GK ++   +++
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           +MV +   P  +  N+L+    +EGK+  A +  +E + +G + N++ + +L+ G+C + 
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            L EA ++LD M   K  PD VT+T++I       RV++  ++   +  +GLV   VTY 
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            ++  +CQ G+++   +L ++M+S         Y  +++ LC  G LE+A +I   + ++
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
                      ++E     G    A+ + C +  + + P++     +   L  +G   EA
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527

Query: 672 DTLMLRFVERGH 683
           + L+ +  E G+
Sbjct: 528 NILLRKMEEDGN 539



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 190/387 (49%), Gaps = 23/387 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D   Y  +++ L +      A  + + M  +GI+     ++ L+    +AGK  +   
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M    + PN++  N  + V V   KL +A    + M   GI+PN++TYN L+ GYC
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
             +R+ +A  ++D M    CSPD V++ +++   C  KR+                    
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV-------------------- 384

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
              ++  ++   +S+ G + + VTY+ +V GFC+ G++  A+++ Q+M  HG  P+ ++Y
Sbjct: 385 ---DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              L+GLC NGK  +A E+    ++       + Y+ ++ G+ + GK+ +A ++   +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P  +   ++I  LC++G +  A   +++    G A N   + +LIR   + GDL  
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           +  L+++M  C    D  +   +ID L
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDML 588



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 23/255 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  +++     K      +V R +++RG+      +S L+  + ++GK++ A  + 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    V P+++     +  L    KL KAL   E +Q + +   ++ Y  +I+G C  
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            +++DA  L   +P KG  P+ ++Y  ++  LCK                       +G 
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK-----------------------KGS 523

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           + EA  L+ +M + G  P+  TY  ++    R G+L  + K++++M   G   +  S   
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 583

Query: 380 FLNGLCHNGKSLEAR 394
            ++ L    K L  R
Sbjct: 584 VIDMLLSAMKRLTLR 598



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 11/177 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++L+ L      + A  +   + +  ++     ++ ++    + GK+ +A  + 
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +    V PN++     I  L     L++A   L +M+  G  PN  TYN LI+ +   
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL-----------CKEKRIKEVRDLME 305
             +  + KLI+EM   G S D  S   V+  L           C  K  K  +DL+E
Sbjct: 557 GDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLE 613


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/592 (25%), Positives = 276/592 (46%), Gaps = 71/592 (11%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           LR+ LR  +P  +  +       RVA Q +               + +++  L +++   
Sbjct: 122 LRSTLRHHRPGFVSWLYSDMLAARVAPQTY--------------TFNLLIHSLCESRAFD 167

Query: 159 GAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
            A ++   M ++G  C P  F+   L+    RAG ++ A+ +++      +A N ++ NT
Sbjct: 168 HALQLFEKMPQKG--CCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIA-NRVVYNT 224

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            +          +A R +ERM   G+ P+V+T+N  I   C   ++ +A ++  +M +  
Sbjct: 225 LVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDA 284

Query: 277 ----CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRI 320
                 P+ V++  ++   CK   + + R L+E M    N                 G +
Sbjct: 285 ELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGEL 344

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            EA+ ++++M   G  P+  TY  +++G CR   L  A+ ++  M  +G  P+TV+Y+  
Sbjct: 345 LEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTL 404

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           L+G C  GK  EA+ +++        PN  T + ++H L +EG+  EA +++++M +K +
Sbjct: 405 LHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCY 464

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQE-------CLNKG---------------CAVN 478
            P  V  N+++  LCR G++D A + + E        L+KG               C  +
Sbjct: 465 QPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPD 524

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            + +T+LI G C+ G LEEA     +M      PD+VTY T I +  K G++  A  ++ 
Sbjct: 525 GITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLK 584

Query: 539 KMLSKGLVPTVVTYRTVI------HRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENL 592
            M   G   T+ TY  +I      ++  ++  ++D +K  EK +S   C   YN +I  L
Sbjct: 585 DMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMK--EKGISPDIC--TYNNIITCL 640

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           C  G  ++A  +L ++L      + S+  +L++++         +KVAC +F
Sbjct: 641 CEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSS----DFKVACELF 688



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 248/532 (46%), Gaps = 46/532 (8%)

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           ++ S M  A VAP     N  IH L        AL+  E+M   G  PN  T   L++G 
Sbjct: 136 WLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGL 195

Query: 257 CDLHRIKDAIKLIDEMPLKGCS-PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           C    +K A++L++      C   ++V Y T++   C+E+   E   L+E+M N+  +  
Sbjct: 196 CRAGLVKQALELVNNN--NSCRIANRVVYNTLVSRFCREEMNNEAERLVERM-NELGVLP 252

Query: 316 D-------------QGRIEEAKELVNQM---SQMGCI-PDVVTYTAVVNGFCRVGELDQA 358
           D              G++ EA  +   M   +++G   P+VVT+  ++ GFC+ G +  A
Sbjct: 253 DVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDA 312

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
           + +++ M   G   +   Y  +L GL  NG+ LEAR +++    +   PNA TY+++M G
Sbjct: 313 RGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDG 372

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L R   LS+A  ++  M++ G +P  V  + L+   C  GK+  AK  + E +  GC  N
Sbjct: 373 LCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPN 432

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
                +L+    ++G   EA  +L  M      PDTVT   +++ L +NG +++A+E++ 
Sbjct: 433 TYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVS 492

Query: 539 KMLSKG----------------------LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           +M + G                       +P  +TY T+I+  C+VGR+E+  K   +ML
Sbjct: 493 EMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEML 552

Query: 577 SK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
           +K  +     Y+  I + C  G +  A ++L  + R        T + L+    +     
Sbjct: 553 AKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIF 612

Query: 635 LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
             Y +   M  + + PD+     +   L   GK+++A +L+   +++G I P
Sbjct: 613 EIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKG-ISP 663



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 231/509 (45%), Gaps = 39/509 (7%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + + + +ML+   K  +   A+ ++  M + G     E ++  ++   R G+L  A  
Sbjct: 290 RPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARL 349

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL  M    + PN    N  +  L   + L+ A   ++ M   G+ P+ + Y+ L+ GYC
Sbjct: 350 VLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYC 409

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              ++ +A  ++ EM   GC P+  +  T++  L KE R  E  ++++KM          
Sbjct: 410 SRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTV 469

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMG----------------------CIPDVVTYT 343
                 N     G +++A E+V++M   G                      C+PD +TYT
Sbjct: 470 TCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYT 529

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            ++NG C+VG L++AKK   +M     +P++V+Y  F+   C  GK   A  ++   E  
Sbjct: 530 TLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERN 589

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
             +    TY+ ++ GL    ++ E   +  EM +KG  P     N +I  LC  GK   A
Sbjct: 590 GCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDA 649

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD-DMYLCKKDPDTVTYTTIID 522
              + E L+KG + NV +F  LI+ F +  D + A  L +  + +C +      Y+ + +
Sbjct: 650 ISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGR--KEALYSLMFN 707

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC- 581
            L   G++ EA EL    L + L      Y+ +I R CQ  R+ D   LL K++ K    
Sbjct: 708 ELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGF 767

Query: 582 -RTAYNQVIENLCSFGYLEEAGKILGKVL 609
              ++  VI+ L   G   +A ++  +++
Sbjct: 768 DHASFMPVIDGLSKRGNKRQADELAKRMM 796



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 215/482 (44%), Gaps = 82/482 (17%)

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHR---------------------------------- 261
           R Q   ++P++  YN L++     HR                                  
Sbjct: 105 RAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESR 164

Query: 262 -IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
               A++L ++MP KGC P++ +   ++  LC+   +K+  +L    VN++N      R+
Sbjct: 165 AFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALEL----VNNNNSCRIANRV 220

Query: 321 ---------------EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                           EA+ LV +M+++G +PDVVT+ + ++  CR G++ +A ++ + M
Sbjct: 221 VYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDM 280

Query: 366 YHHG----CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
                    +PN V++   L G C +G   +AR ++ T ++     +   Y++ + GL R
Sbjct: 281 QMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLR 340

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            G+L EA  V+ EMV KG  P     N+++  LCR   +  A+  M   +  G   + V 
Sbjct: 341 NGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVA 400

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +++L+ G+C +G + EA S+L +M      P+T T  T++ +L K GR  EA E++ KM 
Sbjct: 401 YSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMN 460

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR------------------- 582
            K   P  VT   V++  C+ G ++   +++ +M +                        
Sbjct: 461 EKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSN 520

Query: 583 -----TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
                  Y  +I  LC  G LEEA K   ++L    + D+ T    + S+  +G    A+
Sbjct: 521 CLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAF 580

Query: 638 KV 639
           +V
Sbjct: 581 RV 582



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/359 (21%), Positives = 156/359 (43%), Gaps = 35/359 (9%)

Query: 140 DPIVYYMMLEILSKT-KLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAM 196
           D I Y  ++  L K  +L +  K+ + ++A+     RP++ +Y   + ++ + GK+ +A 
Sbjct: 524 DGITYTTLINGLCKVGRLEEAKKKFIEMLAK---NLRPDSVTYDTFIWSFCKQGKISSAF 580

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            VL  M++   +  L   N  I  L   N++ +     + M+  GI+P++ TYN +I   
Sbjct: 581 RVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCL 640

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C+  + KDAI L+ EM  KG SP+  S+  ++    K    K   +L E  +N       
Sbjct: 641 CEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNIC----- 695

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            GR E                    Y+ + N     G+L +AK++ +             
Sbjct: 696 -GRKE------------------ALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFM 736

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   +  LC + +  +A  ++    ++ +  +  ++  V+ GL + G   +A ++ + M+
Sbjct: 737 YKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMM 796

Query: 437 KKGFFPTPVEINLLIQSLCREGKM--DGAKKFMQECLNK--GCAVNVVNFTSLIRGFCQ 491
           +      PV+     +     GK+  DG   + Q+ +N+  G  + +     + +G+ Q
Sbjct: 797 ELELEDRPVDRTYSNRKRVIPGKLLKDGGSDW-QDIINRDAGSGIALKTLKRVQKGWGQ 854



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/293 (22%), Positives = 130/293 (44%), Gaps = 12/293 (4%)

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
           +H   P+ +S    L  L H   ++   + +  ++    +P+   Y++++    R  +  
Sbjct: 74  YHIAHPSLISMVRVLAQLGHVDDAITHFKSLR-AQFPSLSPSLPLYNLLLRSTLRHHRPG 132

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
               +  +M+     P     NLLI SLC     D A +  ++   KGC  N      L+
Sbjct: 133 FVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILV 192

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           RG C+ G +++AL L+++   C+   + V Y T++    +     EA  L+ +M   G++
Sbjct: 193 RGLCRAGLVKQALELVNNNNSCRI-ANRVVYNTLVSRFCREEMNNEAERLVERMNELGVL 251

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM-------LSKQKCRTAYNQVIENLCSFGYLE 599
           P VVT+ + I   C+ G+V +  ++   M       L +    T +N +++  C  G + 
Sbjct: 252 PDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVT-FNLMLKGFCKHGMMG 310

Query: 600 EAGKILGKVLRTASKADASTCH-VLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           +A + L + ++     D+  C+ + +   L  G  L A  V   M  + + P+
Sbjct: 311 DA-RGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPN 362


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 244/523 (46%), Gaps = 55/523 (10%)

Query: 98  ELRNLLRSLKPRQICAVL-RSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKL 156
           ++++LL  L   +I  VL R Q+D   AL FF W       +     Y  ++ IL+ +K 
Sbjct: 81  DVKHLLPHLGTDEISRVLLRCQSDSISALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKE 140

Query: 157 CQGAKRVLRLMARRGIECR-------------------PEAFSYLMVAYSRAGKLRNAMY 197
            + A + L  + +   +C                    P  F  L+ AY R G ++    
Sbjct: 141 FKEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFT 200

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
               + +    P+++ CN  ++ L+  N++ +  +  + M   GI PN  T+N L   +C
Sbjct: 201 TFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFC 260

Query: 258 ---DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
              D+ ++ D ++ ++E   +G  PD V+Y T++   C+                     
Sbjct: 261 QDGDVDKVNDFLERMEE---EGFEPDIVTYNTLISCYCR--------------------- 296

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             +GR+++A  L   M +   +PD+V+YTA++NG C+ G++ +A ++  +M H G  P+ 
Sbjct: 297 --KGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDI 354

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           VS+   + G C  GK  E+R +++        P+ +T  V++ G R+E ++  A ++V E
Sbjct: 355 VSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVE 414

Query: 435 MVKKGFFPTPVEI-NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           + + G  P   +I + L+ S+C EG+   AK  +Q    +G    V  +  LI   C+  
Sbjct: 415 LERFG-VPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSD 473

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            + +AL +  +M      P  +TY  +I  L +  R  EA  LM +ML  G++P     R
Sbjct: 474 SIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICR 533

Query: 554 TVIHRYCQ---VGRVEDLLKLLEKMLSKQKCRTAYNQVIENLC 593
            ++H YC+   +G+ E LL+   K         +YN +++  C
Sbjct: 534 ALMHVYCKERDIGKAETLLQTFAKEFQIFD-SESYNTLVKTYC 575



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/513 (23%), Positives = 226/513 (44%), Gaps = 25/513 (4%)

Query: 75  HPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQ 134
            P ++  C L+ +  AWS + +  ++ L   +K  + C    S  ++      F   D  
Sbjct: 122 QPSIQNYCFLVHIL-AWSKEFKEAMKFLTELIKLVKDC----SFNEDVFQTLLFCCQDCN 176

Query: 135 WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKL 192
           W    DP+++ M+++   +  + +      R +   G  C P   S   L+    +  ++
Sbjct: 177 W----DPVIFDMLVKAYVREGMIKEGFTTFRKIVEVG--CVPSVISCNCLLNGLLKLNRI 230

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
                V   M +  + PN    N   HV      + K   FLERM+  G  P+++TYN L
Sbjct: 231 DQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTL 290

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN--- 309
           I  YC   R+ DA  L   M  +   PD VSY  +M  LCKE +++E   L  +M++   
Sbjct: 291 ISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGL 350

Query: 310 --DSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
             D   F+        +G++ E++ L+++M   G  PD VT   ++ G+ +   +  A  
Sbjct: 351 NPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALN 410

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           ++ ++   G   +T  Y   +  +C  G+   A+ ++    +  + P    Y+ ++  L 
Sbjct: 411 LVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLC 470

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +   +++A  V  EM  +   P+ +    LI  LCR  +   A+  M+E L  G   +  
Sbjct: 471 KSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPD 530

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
              +L+  +C++ D+ +A +LL       +  D+ +Y T++    ++       EL  +M
Sbjct: 531 ICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRM 590

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
           L  G  P + T+R +IH   +   VE    LLE
Sbjct: 591 LKVGFAPNIQTFRQMIHGLWKAMAVEKDKLLLE 623



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 216/449 (48%), Gaps = 12/449 (2%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP--LKGCSPDKVSYYTVMGYLCKEKRIK 298
           G+ P++  Y  L+         K+A+K + E+   +K CS ++  + T++ + C++    
Sbjct: 120 GLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKDCSFNEDVFQTLL-FCCQDCNWD 178

Query: 299 EV-RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
            V  D++ K       +  +G I+E      ++ ++GC+P V++   ++NG  ++  +DQ
Sbjct: 179 PVIFDMLVKA------YVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQ 232

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
             ++ ++M   G  PN+ ++    +  C +G   +  + +   EEE + P+ +TY+ ++ 
Sbjct: 233 CWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLIS 292

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
              R+G+L +A  + R M ++   P  V    L+  LC+EGK+  A +     +++G   
Sbjct: 293 CYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNP 352

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           ++V+F +LI G+C++G + E+ SLL +M      PD VT   +I+   K  R+  A  L+
Sbjct: 353 DIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLV 412

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSF 595
           +++   G+  +   Y  ++   C+ GR      LL+++  +        YN++IE+LC  
Sbjct: 413 VELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKS 472

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
             + +A  +  ++     K  A T   L+         + A  +   M    ++PD  +C
Sbjct: 473 DSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDIC 532

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHI 684
           + +      E    +A+TL+  F +   I
Sbjct: 533 RALMHVYCKERDIGKAETLLQTFAKEFQI 561


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/515 (27%), Positives = 233/515 (45%), Gaps = 68/515 (13%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           A S L+    + GK+  A+ ++  +    V+PNL + N  I  L  G K  +A    +RM
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G+ PN +TY+ LI  +C   ++  A+  + EM   G       Y +++   CK   I
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                 M +M+N         ++E               P VVTYT+++ G+C  G++++
Sbjct: 454 SAAEGFMAEMINK--------KLE---------------PTVVTYTSLMGGYCSKGKINK 490

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A ++  +M   G  P+  ++T  L+GL   G   +A ++ N   E    PN +TY+V++ 
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G   EG +S+A + ++EM +KG  P       LI  LC  G+   AK F+       C +
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMY------------------LCKKD-------- 511
           N + +T L+ GFC++G LEEALS+  +M                   L  KD        
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670

Query: 512 ---------PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
                    PD V YT++IDA SK G  +EA  +   M+++G VP  VTY  VI+  C+ 
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730

Query: 563 GRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK------AD 616
           G V +   L  KM   Q   +  NQV    C    L +    + K +   +       A+
Sbjct: 731 GFVNEAEVLCSKM---QPVSSVPNQVTYG-CFLDILTKGEVDMQKAVELHNAILKGLLAN 786

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            +T ++L+  +  +G    A ++  RM    + PD
Sbjct: 787 TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPD 821



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 148/575 (25%), Positives = 261/575 (45%), Gaps = 41/575 (7%)

Query: 60  REEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA 119
           +EE R  + E+ +F    V  V R++  + +W   L  EL +  R LK   +  +L    
Sbjct: 30  QEECR--IAEDKQF----VDAVKRIVRGKRSWEIALSSELVS--RRLKTVHVEEILIGTI 81

Query: 120 DE-RVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR--------------VL 164
           D+ ++ L+FF +      + H    + +++  L K  L   A                V 
Sbjct: 82  DDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVF 141

Query: 165 RLMARRGIECR---PEAFSYLMVAYSRAGKLRNAMYVLSMM-QKAAVAPNLLICNTAIHV 220
            ++     +C+     +F  L+  Y R+ ++ + + V  MM  K ++ P +   +  +H 
Sbjct: 142 NVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHG 201

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
           LV       A+     M   GI P+V  Y  +I+  C+L  +  A ++I  M   GC  +
Sbjct: 202 LVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVN 261

Query: 281 KVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSNLFHDQGRIEEAKELVNQMS 331
            V Y  ++  LCK++++ E          +DL   +V    L +   +++E +  +  M 
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321

Query: 332 QMGCI---PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           +M C+   P     +++V G  + G++++A  +++++   G  PN   Y A ++ LC   
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K  EA  + +   +    PN +TYS+++    R GKL  A   + EMV  G   +    N
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            LI   C+ G +  A+ FM E +NK     VV +TSL+ G+C KG + +AL L  +M   
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P   T+TT++  L + G + +A +L  +M    + P  VTY  +I  YC+ G +   
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561

Query: 569 LKLLEKMLSKQKCRTAYN--QVIENLCSFGYLEEA 601
            + L++M  K      Y+   +I  LC  G   EA
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 224/472 (47%), Gaps = 16/472 (3%)

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           AM + + M    + P++ I    I  L     L++A   +  M+  G   N++ YN LI 
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV------ 308
           G C   ++ +A+ +  ++  K   PD V+Y T++  LCK +  +   ++M++M+      
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330

Query: 309 ---NDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                S+L      +G+IEEA  LV ++   G  P++  Y A+++  C+  +  +A+ + 
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            +M   G +PN V+Y+  ++  C  GK   A   +    +     +   Y+ +++G  + 
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G +S A   + EM+ K   PT V    L+   C +GK++ A +   E   KG A ++  F
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           T+L+ G  + G + +A+ L ++M      P+ VTY  +I+   + G + +A E + +M  
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLE 599
           KG+VP   +YR +IH  C  G+  +  K+    L K  C      Y  ++   C  G LE
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASE-AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           EA  +  ++++     D     VL++  L      L + +   M +R L PD
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 204/423 (48%), Gaps = 14/423 (3%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  + +E     ++ LM  Y   GK+  A+ +   M    +AP++    T +  L     
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +  A++    M    + PN +TYN +I+GYC+   +  A + + EM  KG  PD  SY  
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582

Query: 287 VMGYLCKEKRIKEVRDLMEKM------VND---SNLFHD---QGRIEEAKELVNQMSQMG 334
           ++  LC   +  E +  ++ +      +N+   + L H    +G++EEA  +  +M Q G
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
              D+V Y  +++G  +  +      +L++M+  G KP+ V YT+ ++     G   EA 
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            + +    E   PN +TY+ V++GL + G ++EA  +  +M      P  V     +  L
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL 762

Query: 455 CREGKMDGAKKF-MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            + G++D  K   +   + KG   N   +  LIRGFC++G +EEA  L+  M      PD
Sbjct: 763 TK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPD 821

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            +TYTT+I+ L +   V++A EL   M  KG+ P  V Y T+IH  C  G +    +L  
Sbjct: 822 CITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRN 881

Query: 574 KML 576
           +ML
Sbjct: 882 EML 884



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 199/410 (48%), Gaps = 18/410 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+   M  +GI      F+ L+    RAG +R+A+ + + M +  V PN +  N  I 
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  ++KA  FL+ M   GI P+  +Y  LI G C   +  +A   +D +    C  
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVN--------------DSNLFHDQGRIEEAKE 325
           +++ Y  ++   C+E +++E   + ++MV               D +L H   ++     
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG-- 668

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+ +M   G  PD V YT++++   + G+  +A  +   M + GC PN V+YTA +NGLC
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR-EGKLSEACDVVREMVKKGFFPTP 444
             G   EA  + +  +     PN +TY   +  L + E  + +A + +   + KG     
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE-LHNAILKGLLANT 787

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
              N+LI+  CR+G+++ A + +   +  G + + + +T++I   C++ D+++A+ L + 
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           M      PD V Y T+I      G + +ATEL  +ML +GL+P   T RT
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/510 (23%), Positives = 221/510 (43%), Gaps = 60/510 (11%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + + Y +++++  +      A   L  M   G++     ++ L+  + + G +  A  
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            ++ M    + P ++   + +       K+ KALR    M   GI P++ T+  L+ G  
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               I+DA+KL +EM      P++V+Y  ++   C+E                       
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE----------------------- 555

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G + +A E + +M++ G +PD  +Y  +++G C  G+  +AK  +  ++   C+ N + Y
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T  L+G C  GK  EA  +     +     + + Y V++ G  +         +++EM  
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P  V    +I +  + G    A       +N+GC  N V +T++I G C+ G + E
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKN------------------------------ 527
           A  L   M      P+ VTY   +D L+K                               
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIR 795

Query: 528 -----GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QK 580
                GR+EEA+EL+ +M+  G+ P  +TY T+I+  C+   V+  ++L   M  K  + 
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
            R AYN +I   C  G + +A ++  ++LR
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLR 885



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 174/390 (44%), Gaps = 37/390 (9%)

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A EL N M  +G  PDV  YT V+   C + +L +AK+M+  M   GC  N V Y   ++
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITY------------------------------ 412
           GLC   K  EA  +      +   P+ +TY                              
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330

Query: 413 -----SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
                S ++ GLR+ GK+ EA ++V+ +V  G  P     N LI SLC+  K   A+   
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
                 G   N V ++ LI  FC++G L+ ALS L +M           Y ++I+   K 
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY-- 585
           G +  A   M +M++K L PTVVTY +++  YC  G++   L+L  +M  K    + Y  
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
             ++  L   G + +A K+  ++     K +  T +V++E Y  +G    A++    M  
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           + ++PD    + +   L L G++ EA   +
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 173/398 (43%), Gaps = 29/398 (7%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGK 191
           +W  + + + Y +M+E   +      A   L+ M  +GI   P+ +SY  L+      G+
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI--VPDTYSYRPLIHGLCLTGQ 592

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
              A   +  + K     N +     +H      KL +AL   + M   G+  +++ Y  
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI G       K    L+ EM  +G  PD V Y +++    K    KE   + + M+N+ 
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE- 711

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                                 GC+P+ VTYTAV+NG C+ G +++A+ +  +M      
Sbjct: 712 ----------------------GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN V+Y  FL+ L      ++    ++ +  +    N  TY++++ G  R+G++ EA ++
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASEL 809

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           +  M+  G  P  +    +I  LCR   +  A +       KG   + V + +LI G C 
Sbjct: 810 ITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCV 869

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVT--YTTIIDALSKN 527
            G++ +A  L ++M      P+  T   TT  D  SK+
Sbjct: 870 AGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDTSSKS 907



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 152/325 (46%), Gaps = 2/325 (0%)

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           ++++  +P+V T +A+++G  +      A ++   M   G +P+   YT  +  LC    
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
              A+EMI   E      N + Y+V++ GL ++ K+ EA  + +++  K   P  V    
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           L+  LC+  + +   + M E L    + +    +SL+ G  ++G +EEAL+L+  +    
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P+   Y  +ID+L K  +  EA  L  +M   GL P  VTY  +I  +C+ G+++  L
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422

Query: 570 KLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
             L +M+    +     YN +I   C FG +  A   + +++    +    T   L+  Y
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDL 652
            +KG    A ++   M  + + P +
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSI 507



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 102/218 (46%), Gaps = 3/218 (1%)

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           + +++    R  ++ +   V + M+ K    P    ++ L+  L +      A +   + 
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           ++ G   +V  +T +IR  C+  DL  A  ++  M     D + V Y  +ID L K  +V
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQV 588
            EA  +   +  K L P VVTY T+++  C+V   E  L+++++ML  +      A + +
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           +E L   G +EEA  ++ +V+      +    + L++S
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 224/480 (46%), Gaps = 17/480 (3%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWR 136
           LV+ VC L   RS     L      L R+L P     V++  +D  + L+FF ++     
Sbjct: 49  LVKVVCTLF-FRSH---SLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLS 104

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
             H    Y +++  L K  L   AK V   M   GI         L+ +Y+R GKL +A 
Sbjct: 105 INHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAK 164

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             L+ +    +  +  + N  +++LV  N + +A+            P+V ++N LI+G 
Sbjct: 165 NFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGL 224

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME-----KMVNDS 311
           C +  I  A +    M   GC PD VSY T++   C+   I +  DL++     K V+  
Sbjct: 225 CRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPD 284

Query: 312 NLFHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            + +          G ++ A EL ++M   G  P+  T+  +++GF +VG +  A  M +
Sbjct: 285 VITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYE 344

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   GC P+ V++T+ ++G C  G+  +  ++    +    +PN  TY+V+++ L +E 
Sbjct: 345 KMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKEN 404

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           ++ EA + +R +      P P   N +I   C+ GK+D A   + E   K C  + + FT
Sbjct: 405 RIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFT 464

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            LI G C KG + EA+S    M      PD +T  ++I  L K G   EA+++    L K
Sbjct: 465 ILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 202/426 (47%), Gaps = 28/426 (6%)

Query: 230 ALRFLE--RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK------ 281
            L+F E  R  L+ I     TY+ L++  C +     A  + D M   G  PD       
Sbjct: 92  GLKFFEFSRTHLS-INHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELL 150

Query: 282 VSYYTVMGYLCKEKR-IKEVRDLMEKMV-----NDSNLFHDQGRIEEAKELVNQMSQMGC 335
           VS Y  MG L   K  + EV     K+      N  N+   Q  ++EA  L  +  +   
Sbjct: 151 VSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYF 210

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH-----NGKS 390
           +PDV ++  ++ G CR+GE+D+A +  Q M + GC P+ VSY   +NG C       G  
Sbjct: 211 VPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHD 270

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
           L   +M+     +  +P+ ITY+ ++ G  + G +  A ++  EMV  G  P     N+L
Sbjct: 271 LLKEDML----IKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVL 326

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I    + G M  A    ++ L  GC  +VV FTSLI G+C++G++ + L L ++M +   
Sbjct: 327 IDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNL 386

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P+  TY  +I+AL K  R+ EA   +  + S  +VP    Y  VI  +C+ G+V++   
Sbjct: 387 SPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANF 446

Query: 571 LLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           ++ +M  ++KCR     +  +I   C  G + EA     K++      D  T + L+   
Sbjct: 447 IVAEM-QEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCL 505

Query: 628 LNKGIP 633
           L  G+P
Sbjct: 506 LKAGMP 511



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 2/140 (1%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P  ++Y  L+ A  +  ++R A   L  ++ + V P   I N  I       K+ +A   
Sbjct: 388 PNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFI 447

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           +  MQ     P+ +T+  LI G C   R+ +AI    +M    C PD+++  +++  L K
Sbjct: 448 VAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLK 507

Query: 294 EKRIKEVRDLMEKMVNDSNL 313
                E   + +  +   NL
Sbjct: 508 AGMPNEASQIKQAALQKLNL 527


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 224/480 (46%), Gaps = 17/480 (3%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWR 136
           LV+ VC L   RS     L      L R+L P     V++  +D  + L+FF ++     
Sbjct: 49  LVKVVCTLF-FRSH---SLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLS 104

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
             H    Y +++  L K  L   AK V   M   GI         L+ +Y+R GKL +A 
Sbjct: 105 INHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAK 164

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             L+ +    +  +  + N  +++LV  N + +A+            P+V ++N LI+G 
Sbjct: 165 NFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGL 224

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME-----KMVNDS 311
           C +  I  A +    M   GC PD VSY T++   C+   I +  DL++     K V+  
Sbjct: 225 CRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPD 284

Query: 312 NLFHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            + +          G ++ A EL ++M   G  P+  T+  +++GF +VG +  A  M +
Sbjct: 285 VITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYE 344

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   GC P+ V++T+ ++G C  G+  +  ++    +    +PN  TY+V+++ L +E 
Sbjct: 345 KMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKEN 404

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           ++ EA + +R +      P P   N +I   C+ GK+D A   + E   K C  + + FT
Sbjct: 405 RIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFT 464

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            LI G C KG + EA+S    M      PD +T  ++I  L K G   EA+++    L K
Sbjct: 465 ILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 202/426 (47%), Gaps = 28/426 (6%)

Query: 230 ALRFLE--RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK------ 281
            L+F E  R  L+ I     TY+ L++  C +     A  + D M   G  PD       
Sbjct: 92  GLKFFEFSRTHLS-INHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELL 150

Query: 282 VSYYTVMGYLCKEKR-IKEVRDLMEKMV-----NDSNLFHDQGRIEEAKELVNQMSQMGC 335
           VS Y  MG L   K  + EV     K+      N  N+   Q  ++EA  L  +  +   
Sbjct: 151 VSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYF 210

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH-----NGKS 390
           +PDV ++  ++ G CR+GE+D+A +  Q M + GC P+ VSY   +NG C       G  
Sbjct: 211 VPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHD 270

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
           L   +M+     +  +P+ ITY+ ++ G  + G +  A ++  EMV  G  P     N+L
Sbjct: 271 LLKEDML----IKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVL 326

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I    + G M  A    ++ L  GC  +VV FTSLI G+C++G++ + L L ++M +   
Sbjct: 327 IDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNL 386

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P+  TY  +I+AL K  R+ EA   +  + S  +VP    Y  VI  +C+ G+V++   
Sbjct: 387 SPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANF 446

Query: 571 LLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           ++ +M  ++KCR     +  +I   C  G + EA     K++      D  T + L+   
Sbjct: 447 IVAEM-QEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCL 505

Query: 628 LNKGIP 633
           L  G+P
Sbjct: 506 LKAGMP 511



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 2/140 (1%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P  ++Y  L+ A  +  ++R A   L  ++ + V P   I N  I       K+ +A   
Sbjct: 388 PNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFI 447

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
           +  MQ     P+ +T+  LI G C   R+ +AI    +M    C PD+++  +++  L K
Sbjct: 448 VAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLK 507

Query: 294 EKRIKEVRDLMEKMVNDSNL 313
                E   + +  +   NL
Sbjct: 508 AGMPNEASQIKQAALQKLNL 527


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 159/637 (24%), Positives = 269/637 (42%), Gaps = 87/637 (13%)

Query: 74  RHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADR 133
           R  + R + R +E  +   P    EL  L   L P  +  V+R  +D   A++F++WA+ 
Sbjct: 56  RMDISRVILRALESSTCSEPV---ELERLDIELDPFVVNLVVRGLSDSETAVRFYWWAES 112

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           +  + H       ++ +L            L  +  +G+      +  L+  Y RAGK  
Sbjct: 113 RPGFDHSQFAIAYIVSLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFD 172

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLV-----------VGNKLAKAL----------- 231
           + +     M  +      +  N  I VL+            G  L+K L           
Sbjct: 173 SVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWI 232

Query: 232 -------------RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
                          L  M   G +P++   N  I   C  +R+ DA++++++M  KG  
Sbjct: 233 SALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTI 292

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN----------DSNLFH--DQGRIEEAKEL 326
           PD V+Y TV+G LC  KR  E   L E+MV            + +F      ++EEA EL
Sbjct: 293 PDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFEL 352

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
            ++M  +     V  Y A+++GF R G +D+A  ++  M  +GC+P  V+Y   LN  C 
Sbjct: 353 ASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCT 412

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G   +A  +I   E     P+  +Y+ ++ GL +  +L +A   V + ++ G F   V 
Sbjct: 413 IGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVS 472

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            N+LI + C+  K+  A +  +E   KG   + V + +LI G    G    A  L + M 
Sbjct: 473 CNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQML 532

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
             + DP+   Y  ++  L K G ++ A ++ + M+ K ++P +VTY T+I+   +  R  
Sbjct: 533 KAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAM 592

Query: 567 DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           + L L + M +K                                   + D+ T   L+  
Sbjct: 593 EALDLFKDMRTK---------------------------------GVEPDSLTFKYLING 619

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
            L++G   LAY+V   M    +I D    ++VSERLI
Sbjct: 620 LLDEGRSTLAYEVWEYMMENGIILD----REVSERLI 652



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 3/284 (1%)

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y +++ G  R GK         EMV  G     ++ N  I  L +    D  +K+    L
Sbjct: 158 YRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMAL 217

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
           +KG  +    ++  I   CQ   +E    LL DM      PD       ID L K  R+ 
Sbjct: 218 SKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLH 277

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVI 589
           +A +++ KM  KG +P VVTY TV+   C   R  + + L E+M  +  +    A   +I
Sbjct: 278 DALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALI 337

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
             LC    +EEA ++  ++L    +   S  + L+  +   G    AY +   M      
Sbjct: 338 FGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCE 397

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQ 693
           P +     +       G  E+A+ L+ + +E   + P    + Q
Sbjct: 398 PGVVTYNILLNHYCTIGMMEKAENLITK-METSGVNPDRYSYNQ 440



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 96/246 (39%), Gaps = 2/246 (0%)

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           + GF  +   I  ++  L  +G      +F+    ++G A++   +  L+ G+ + G  +
Sbjct: 113 RPGFDHSQFAIAYIVSLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFD 172

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
             +   D+M +       + Y   I  L KN   +   +     LSKGL  T  TY   I
Sbjct: 173 SVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWI 232

Query: 557 HRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
              CQ  R+E + +LL  M          A N  I+ LC    L +A +++ K+    + 
Sbjct: 233 SALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTI 292

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            D  T   +V    N      A  +   M    L PD+  C  +   L    K EEA  L
Sbjct: 293 PDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFEL 352

Query: 675 MLRFVE 680
             R + 
Sbjct: 353 ASRMLS 358


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 230/473 (48%), Gaps = 14/473 (2%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           GI       + ++  + R  K   A  VL  + K    P+    NT I  L +  K+++A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           +  ++RM   G  P+V+TYN ++ G C       A+ L+ +M  +    D  +Y T++  
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237

Query: 291 LCKEKRIKEVRDLMEKM----VNDSNLFHDQ--------GRIEEAKELVNQMSQMGCIPD 338
           LC++  I     L ++M    +  S + ++         G+  +   L+  M     +P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V+T+  +++ F + G+L +A ++ ++M   G  PN ++Y   ++G C   +  EA  M++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                  +P+ +T++ ++ G     ++ +   V R + K+G     V  ++L+Q  C+ G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           K+  A++  QE ++ G   +V+ +  L+ G C  G LE+AL + +D+   K D   V YT
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           TII+ + K G+VE+A  L   +  KG+ P V+TY  +I   C+ G + +   LL KM   
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537

Query: 579 QKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
                   YN +I      G L  + K++ ++      ADAS+  ++++  L+
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 213/468 (45%), Gaps = 16/468 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS    A +R  +    +     ++   +A N+   N  I+      K   A   L ++ 
Sbjct: 91  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+  T+N LIKG     ++ +A+ L+D M   GC PD V+Y +++  +C+     
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210

Query: 299 EVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
              DL+ KM  + N+  D              G I+ A  L  +M   G    VVTY ++
Sbjct: 211 LALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           V G C+ G+ +    +L+ M      PN +++   L+     GK  EA E+         
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           +PN ITY+ +M G   + +LSEA +++  MV+    P  V    LI+  C   ++D   K
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             +    +G   N V ++ L++GFCQ G ++ A  L  +M      PD +TY  ++D L 
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
            NG++E+A E+   +    +   +V Y T+I   C+ G+VED   L   +  K  +    
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            Y  +I  LC  G L EA  +L K+    +  +  T + L+ ++L  G
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 212/430 (49%), Gaps = 12/430 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  + + G E     F+ L+      GK+  A+ ++  M +    P+++  N+ ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            +      + AL  L +M+   +  +V TY+ +I   C    I  AI L  EM  KG   
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
             V+Y +++  LCK  +  +   L++ MV+              ++F  +G+++EA EL 
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M   G  P+++TY  +++G+C    L +A  ML  M  + C P+ V++T+ + G C  
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            +  +  ++     +     NA+TYS+++ G  + GK+  A ++ +EMV  G  P  +  
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            +L+  LC  GK++ A +  ++       + +V +T++I G C+ G +E+A +L   +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ +TYT +I  L K G + EA  L+ KM   G  P   TY T+I  + + G +  
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561

Query: 568 LLKLLEKMLS 577
             KL+E+M S
Sbjct: 562 SAKLIEEMKS 571



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 238/492 (48%), Gaps = 25/492 (5%)

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
           +A+ +   M ++   P+L+  +     +    +    L F ++++L GI  N+ T N +I
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
             +C   +   A  ++ ++   G  PD  ++ T++  L  E                   
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE------------------- 171

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
               G++ EA  LV++M + GC PDVVTY ++VNG CR G+   A  +L++M     K +
Sbjct: 172 ----GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             +Y+  ++ LC +G    A  +    E +    + +TY+ ++ GL + GK ++   +++
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           +MV +   P  +  N+L+    +EGK+  A +  +E + +G + N++ + +L+ G+C + 
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            L EA ++LD M   K  PD VT+T++I       RV++  ++   +  +GLV   VTY 
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            ++  +CQ G+++   +L ++M+S         Y  +++ LC  G LE+A +I   + ++
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
                      ++E     G    A+ + C +  + + P++     +   L  +G   EA
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527

Query: 672 DTLMLRFVERGH 683
           + L+ +  E G+
Sbjct: 528 NILLRKMEEDGN 539



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 190/387 (49%), Gaps = 23/387 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D   Y  +++ L +      A  + + M  +GI+     ++ L+    +AGK  +   
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M    + PN++  N  + V V   KL +A    + M   GI+PN++TYN L+ GYC
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
             +R+ +A  ++D M    CSPD V++ +++   C  KR+                    
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV-------------------- 384

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
              ++  ++   +S+ G + + VTY+ +V GFC+ G++  A+++ Q+M  HG  P+ ++Y
Sbjct: 385 ---DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              L+GLC NGK  +A E+    ++       + Y+ ++ G+ + GK+ +A ++   +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P  +   ++I  LC++G +  A   +++    G A N   + +LIR   + GDL  
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           +  L+++M  C    D  +   +ID L
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDML 588



 Score = 47.0 bits (110), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 72/166 (43%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++L+ L      + A  +   + +  ++     ++ ++    + GK+ +A  + 
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +    V PN++     I  L     L++A   L +M+  G  PN  TYN LI+ +   
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
             +  + KLI+EM   G S D  S   V+  L   +  K   D++ 
Sbjct: 557 GDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDMLS 602


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 225/461 (48%), Gaps = 29/461 (6%)

Query: 146 MMLEILSKTKLCQGAKRV---------LRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           MM  I S  +L  G  ++          + M   G+       + L+       ++   +
Sbjct: 87  MMRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGL 146

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             ++ + +    P+++   T I  L V +++ +A +   RMQ  G TPNV+TY  LIKG 
Sbjct: 147 AAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGL 206

Query: 257 CDLHRIKDAIKLIDEM-----P-LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
           C L  I  A+K   EM     P +  C P+ +SY  ++  LCK    +E   L  +MV+ 
Sbjct: 207 CALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQ 266

Query: 311 S------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                        ++   +G++ +AK+L+  M Q+G +P++ TYT+++ GFC VG+L+ A
Sbjct: 267 GVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSA 326

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
           K++   M   G +P+ +SY   +NG C   K  EA ++ N        P+  T  V++  
Sbjct: 327 KELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKA 386

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEIN-LLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           L   GK+ +A ++ R ++K    P  + I  + +  LC+ G +  A K   E  +    +
Sbjct: 387 LFLAGKVDDAKELFR-VIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKL 445

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           ++  F  LI G C+ G LE A  L + +Y     PD + Y+++I    K G+V++A  L 
Sbjct: 446 DIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILF 505

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            KM   G  P ++TY  ++  + +  ++E +++LL +M+ K
Sbjct: 506 QKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEK 546



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 207/448 (46%), Gaps = 35/448 (7%)

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           ++ ++N L+ G   +        L  +M L G  PD ++   ++  LC   RI E    M
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
             ++                       + G IPDVVT+T ++ G C    + +A K+  +
Sbjct: 150 AGIM-----------------------RRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMR 186

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEA----REMINTSEEEWWT--PNAITYSVVMHG 418
           M   GC PN V+Y   + GLC  G    A    +EM+N +    +   PN I+YS+++ G
Sbjct: 187 MQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDG 246

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L + G   EA  +  EMV +G  P  V  ++LI  LC+EG++  AKK ++  +  G   N
Sbjct: 247 LCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPN 306

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +  +TSLI+GFC  GDL  A  L   M     +PD ++Y  +I+   K  +VEEA +L  
Sbjct: 307 LFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFN 366

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----LSKQKCRTAYNQVIENLCS 594
           +ML  G+ P V T   ++      G+V+D  +L   +    + K  C       ++ LC 
Sbjct: 367 EMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCI--FLDGLCK 424

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            GY+ EA K+  ++     K D  T   L++     G    A+++  +++   + PD   
Sbjct: 425 NGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMA 484

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERG 682
              +      +G+ ++A+ L  +  E G
Sbjct: 485 YSSMIHGFCKKGQVDKANILFQKMEENG 512



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 176/370 (47%), Gaps = 25/370 (6%)

Query: 174 CRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           CRP   SY ++     + G    A+ + + M    V PN++  +  I +L    ++ KA 
Sbjct: 233 CRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAK 292

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
           + LE M   GI PN+ TY  LIKG+C +  +  A +L   MP KG  PD +SY  ++   
Sbjct: 293 KLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGY 352

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           CK  ++                       EEA +L N+M  +G  PDV T   ++     
Sbjct: 353 CKTLKV-----------------------EEAMKLFNEMLHVGMWPDVKTSGVLLKALFL 389

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            G++D AK++ + +  +    +      FL+GLC NG   EA ++ N  E      +  T
Sbjct: 390 AGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIET 449

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           +  ++ GL + GKL  A ++  ++ ++G  P  +  + +I   C++G++D A    Q+  
Sbjct: 450 FGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKME 509

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
             GC+ +++ ++ L+RGF +   LE+ + LL  M      PD   Y  + D + K+ + +
Sbjct: 510 ENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYK 569

Query: 532 EATELMMKML 541
           E  +L+ +  
Sbjct: 570 EWLDLLQRFF 579



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 157/317 (49%), Gaps = 12/317 (3%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + I Y ++++ L K    + A  +   M  +G++     FS L+    + G++  A  
Sbjct: 234 RPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKK 293

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L MM +  + PNL    + I    +   L  A      M   G  P+V++YN LI GYC
Sbjct: 294 LLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYC 353

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL--------MEKMVN 309
              ++++A+KL +EM   G  PD  +   ++  L    ++ + ++L        M K + 
Sbjct: 354 KTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLC 413

Query: 310 DSNLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
              +F D     G I EA +L N++       D+ T+  +++G C+ G+L+ A ++ +++
Sbjct: 414 ICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKL 473

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
           Y  G +P+ ++Y++ ++G C  G+  +A  +    EE   +P+ ITYS++M G     KL
Sbjct: 474 YEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKL 533

Query: 426 SEACDVVREMVKKGFFP 442
            +   ++  M++K  +P
Sbjct: 534 EKVVQLLHRMIEKDVWP 550



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 137/327 (41%), Gaps = 61/327 (18%)

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M+ H CK  ++S T       H    L  R +              +++ ++ GL +   
Sbjct: 65  MFLHKCKTGSISVTQ-----AHQFFDLMMRSIF-------------SFNRLLAGLAKIEH 106

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
            S+   + ++M   G +P  + +N+LI  LC   +           +N+G A        
Sbjct: 107 YSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNR-----------INEGLAA------- 148

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
            + G  ++G +                PD VT+TT+I  L    R+ EAT+L M+M   G
Sbjct: 149 -MAGIMRRGYI----------------PDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLG 191

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ-----KCR---TAYNQVIENLCSFG 596
             P VVTY T+I   C +G +   LK  ++ML+        CR    +Y+ +I+ LC  G
Sbjct: 192 CTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVG 251

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
             EEA  +  +++    + +  T  VL++    +G  + A K+   M    ++P+L    
Sbjct: 252 NWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYT 311

Query: 657 KVSERLILEGKSEEADTLMLRFVERGH 683
            + +   L G    A  L +    +G+
Sbjct: 312 SLIKGFCLVGDLNSAKELFVSMPSKGY 338



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 121/261 (46%), Gaps = 23/261 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y  D I Y M++    KT   + A ++   M   G+    +    L+ A   AGK+ +A 
Sbjct: 338 YEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAK 397

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +  +++  A+  +L IC   +  L     + +A++    ++   +  ++ T+ CLI G 
Sbjct: 398 ELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGL 457

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   +++ A +L +++  +G  PD ++Y +++   CK                       
Sbjct: 458 CKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCK----------------------- 494

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G++++A  L  +M + GC PD++TY+ ++ GF    +L++  ++L +M      P+   
Sbjct: 495 KGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGI 554

Query: 377 YTAFLNGLCHNGKSLEAREMI 397
           Y    + +C + K  E  +++
Sbjct: 555 YAIVEDMVCKDEKYKEWLDLL 575


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 219/435 (50%), Gaps = 27/435 (6%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQK 204
           ++++ S+  L + A+ +   M  RG++  P++ SY  ++V Y + G +  A   LS+M +
Sbjct: 176 IIKVTSEMGLVEYAELLFEEMCVRGVQ--PDSISYRVMVVMYCKIGNILEADKWLSVMLE 233

Query: 205 AAVAPNLLICNTAIHVLVVG-----NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
                   + + A   L++          +AL +  R+   G+ PN++ + C+I+G C  
Sbjct: 234 RG-----FVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKR 288

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------ 313
             IK A ++++EM  KG  P+  ++ +++  LCK+   ++   L  K+V   N       
Sbjct: 289 GSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLT 348

Query: 314 -------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                  +  + ++  A+ L+++M + G +P+  TYT +++G C+ G  ++A  ++  M 
Sbjct: 349 YTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMS 408

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  PN  +Y A +NGLC  G+  EA +M+    +    P+  TY+++M    ++  + 
Sbjct: 409 SEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIR 468

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A  +  +M+K G  P       LI   CRE +M  ++ F +E +  G       +TS+I
Sbjct: 469 QALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMI 528

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G+C++G+L  A+     +      PD++TY  II  L K  + +EA  L   M+ KGLV
Sbjct: 529 CGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLV 588

Query: 547 PTVVTYRTVIHRYCQ 561
           P  VT  T+ + YC+
Sbjct: 589 PCEVTRITLAYEYCK 603



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 235/508 (46%), Gaps = 32/508 (6%)

Query: 110 QICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR 169
            + A L S A   V L FF+WA    ++RH     +M L I+            + L+  
Sbjct: 84  SVVASLASDAGSMVTLSFFHWAIGYPKFRH-----FMRLYIVC----------AMSLIGN 128

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           R  E   E    ++ ++S  G+L+ A+ ++  M    + PN    N  I V      +  
Sbjct: 129 RNSEKACEVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEY 188

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A    E M + G+ P+ ++Y  ++  YC +  I +A K +  M  +G   D  ++  ++ 
Sbjct: 189 AELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIIS 248

Query: 290 YLCKEKRIKEVRDLMEKMVN---DSNLFH---------DQGRIEEAKELVNQMSQMGCIP 337
               +           ++V+   + NL +          +G I++A E++ +M   G  P
Sbjct: 249 RFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKP 308

Query: 338 DVVTYTAVVNGFCRVGELDQAKKM-LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           +V T+T++++G C+ G  ++A ++ L+ +     KPN ++YTA ++G C   K   A  +
Sbjct: 309 NVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEML 368

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           ++  +E+   PN  TY+ ++ G  + G    A D++  M  +GF P     N ++  LC+
Sbjct: 369 LSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCK 428

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            G++  A K +++    G   +   +  L+   C++ ++ +AL+L + M      PD  +
Sbjct: 429 RGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHS 488

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           YTT+I    +  R++E+     + +  G++PT  TY ++I  YC+ G +   +K   + L
Sbjct: 489 YTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHR-L 547

Query: 577 SKQKC---RTAYNQVIENLCSFGYLEEA 601
           S   C      Y  +I  LC     +EA
Sbjct: 548 SDHGCAPDSITYGAIISGLCKQSKRDEA 575



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 170/344 (49%), Gaps = 7/344 (2%)

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           F + GR++EA E+V +M   G +P+  T   ++     +G ++ A+ + ++M   G +P+
Sbjct: 145 FSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPD 204

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
           ++SY   +   C  G  LEA + ++   E  +  +  T+++++     +G  + A    R
Sbjct: 205 SISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFR 264

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            +V  G  P  +    +I+ LC+ G +  A + ++E + KG   NV   TSLI G C+KG
Sbjct: 265 RLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKG 324

Query: 494 DLEEALSLLDDMYLCKKD-PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
             E+A  L   +   +   P+ +TYT +I    +  ++  A  L+ +M  +GLVP   TY
Sbjct: 325 WTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTY 384

Query: 553 RTVIHRYCQVGRVE---DLLKLL-EKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
            T+I  +C+ G  E   DL+ L+  +  S   C   YN ++  LC  G ++EA K+L   
Sbjct: 385 TTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLC--TYNAIVNGLCKRGRVQEAYKMLEDG 442

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
            +   K D  T ++L+  +  +     A  +  +M    + PD+
Sbjct: 443 FQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDI 486



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 134/288 (46%), Gaps = 23/288 (7%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A + F    R   ++ + + Y  M+    +      A+ +L  M  +G+      ++ L+
Sbjct: 329 AFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLI 388

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             + +AG    A  ++++M     +PNL   N  ++ L    ++ +A + LE     G+ 
Sbjct: 389 DGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLK 448

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+  TYN L+  +C    I+ A+ L ++M   G  PD  SY T++   C+E R+KE    
Sbjct: 449 PDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMF 508

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            E+ V                       ++G IP   TYT+++ G+CR G L  A K   
Sbjct: 509 FEEAV-----------------------RIGIIPTNKTYTSMICGYCREGNLTLAMKFFH 545

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
           ++  HGC P++++Y A ++GLC   K  EAR + ++  E+   P  +T
Sbjct: 546 RLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVT 593


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 135/538 (25%), Positives = 258/538 (47%), Gaps = 26/538 (4%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           M+L++ ++  + + A  V   M + G +    + + L+    + G+  +A+ V   M++ 
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            + P++  C   ++      K+ +A+ F+  M+  G   N ++YN L+ GY  L  I+ A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
             ++  M  KG   +KV+   ++   CK                       Q ++EEA++
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCK-----------------------QCKVEEAEK 157

Query: 326 LVNQMSQM-GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           ++ +M +  G + D   Y A+++G+C+VG++  A ++  +M   G K N     + +NG 
Sbjct: 158 VLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGY 217

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C NG+  E   ++    +    P++ +Y  ++ G  R+G  S+A +V  +M++KG  PT 
Sbjct: 218 CKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTV 277

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N L++ LCR G    A +     L +G   N V + +L+ G  + GD   AL+L DD
Sbjct: 278 VTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDD 337

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           +     +     + T+I+ L K G ++ A E   +M   G  P  +TYRT+   YC+VG 
Sbjct: 338 ILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGN 397

Query: 565 VEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           VE+  K+ EKM  ++   +   YN +I  L +   + +   +L ++       +  T   
Sbjct: 398 VEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGA 457

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
           L+  + ++G    A+     M  +   P++ +C K+   L   G+ +EA+ L+ + V+
Sbjct: 458 LIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVD 515



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 148/601 (24%), Positives = 272/601 (45%), Gaps = 69/601 (11%)

Query: 160 AKRVLRLMARR-GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
           A++VLR M +  G+     A+  L+  Y + GK+ +A+ V   M K  +  NL +CN+ I
Sbjct: 155 AEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLI 214

Query: 219 H-------------VLVVGNKL----------------------AKALRFLERMQLAGIT 243
           +             +L+   KL                      +KA    ++M   GI 
Sbjct: 215 NGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIE 274

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK----EKRIKE 299
           P V+TYN L+KG C     KDA++L   M  +G +P++V Y T++  L K     + +  
Sbjct: 275 PTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTL 334

Query: 300 VRDLMEKMVNDS--------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
             D++ + +N S        N     G ++ AKE   +M ++GC PD +TY  + +G+C+
Sbjct: 335 WDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCK 394

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
           VG +++A K+ ++M      P+   Y + + GL  + K  +  +++   +    +PN +T
Sbjct: 395 VGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVT 454

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y  ++ G   +G+L +A     EM+ KGF P  +  + ++ SL R G++D A   +Q+ +
Sbjct: 455 YGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMV 514

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
           +    ++            +K D  +    LD+  +    P+ V Y   +  L K+G+V 
Sbjct: 515 DFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVN 574

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVI 589
           +A    + +      P   TY T+IH +   G V +   L ++M++K      T YN ++
Sbjct: 575 DARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALL 634

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
             LC  GYL+ A ++  K+       +  T ++L++ Y   G P  A  +  +M    + 
Sbjct: 635 NGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGIS 694

Query: 650 PDL--------KLCKKV----SERLILEGKSEEADTLMLRF-------VERGHIQPKSEE 690
           P +          CK+     + +L+ E K+   D  +  F       ++ G ++  S+ 
Sbjct: 695 PSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKL 754

Query: 691 H 691
           H
Sbjct: 755 H 755



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 219/525 (41%), Gaps = 82/525 (15%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R+   + D   Y  +++   +  L   A  V   M R+GIE     ++ L+    R G  
Sbjct: 234 RKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDY 293

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
           ++A+ +  +M +  V PN +   T +  L      ++AL   + +   GI  ++  +N +
Sbjct: 294 KDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTM 353

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK------------------- 293
           I G C +  +  A +    M   GC PD ++Y T+    CK                   
Sbjct: 354 INGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEI 413

Query: 294 ----------------EKRIKEVRDLMEKM---------VNDSNLFH---DQGRIEEAKE 325
                            K+I ++ DL+ +M         V    L     DQGR+++A  
Sbjct: 414 FPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFS 473

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM------YHHGCK-------- 371
              +M   G  P+V+  + +V+   R+G +D+A  +LQ+M        H C         
Sbjct: 474 AYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADI 533

Query: 372 ---------------------PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
                                PN V Y   + GLC +GK  +AR          +TP+  
Sbjct: 534 RKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNF 593

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY  ++HG    G ++EA ++  EMV KG  P     N L+  LC+ G +D A++   + 
Sbjct: 594 TYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKL 653

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
             KG   NVV +  LI G+C+ G   EAL L   M      P  +TY+++I+   K   V
Sbjct: 654 HLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDV 713

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           EEA +L+ +M +  +  T+ T+  ++    Q G V+ + KL   M
Sbjct: 714 EEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMM 758



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 213/492 (43%), Gaps = 71/492 (14%)

Query: 75  HPLVREVCRLIELRSA---WSPKLEGELRNLLRSLKPRQI--CAVLRS---QADERVALQ 126
           + L++ +CR  + + A   W   L+       R + P ++  C +L       D   AL 
Sbjct: 281 NTLLKGLCRFGDYKDALRLWHLMLQ-------RGVTPNEVGYCTLLDGLFKMGDFSRALT 333

Query: 127 FFYWADRQWRYRHDPI-VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LM 183
              W D   R  +  I  +  M+  L K     GAK   + M   G  C+P+  +Y  L 
Sbjct: 334 L--WDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELG--CKPDGITYRTLS 389

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             Y + G +  A  +   M+K  + P++ + N+ I  L    K++K +  L  M   G++
Sbjct: 390 DGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLS 449

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           PNV+TY  LI G+CD  R+  A     EM  KG +P+ +    ++  L +  RI E   L
Sbjct: 450 PNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANML 509

Query: 304 MEKMVNDSNLFHDQ---------------------------------------------- 317
           ++KMV D +L  D                                               
Sbjct: 510 LQKMV-DFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLC 568

Query: 318 --GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G++ +A+     +S     PD  TY  +++GF   G +++A  +  +M + G  PN  
Sbjct: 569 KSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNIT 628

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y A LNGLC +G    AR + +    +   PN +TY++++ G  + G   EA D+  +M
Sbjct: 629 TYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKM 688

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           +K+G  P+ +  + LI   C++  ++ A K + E         +  F+ L+ G  Q GD+
Sbjct: 689 LKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDV 748

Query: 496 EEALSLLDDMYL 507
           ++   L + M++
Sbjct: 749 KKMSKLHNMMHM 760


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 215/401 (53%), Gaps = 18/401 (4%)

Query: 173 ECRPEA----FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
           E RP      FS L+VA ++  K    + +   ++   ++ +L   +T I      ++L+
Sbjct: 66  ESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLS 125

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
            AL  L +M   G  P+++T+  L+ G+C ++RI++A+ L+D++   G  P+ V Y T++
Sbjct: 126 LALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTII 185

Query: 289 GYLCKEKRIKEVRDL---MEKM--------VND--SNLFHDQGRIEEAKELVNQMSQMGC 335
             LC+ +++    D+   MEKM         N   + LFH  G+   +  +++ M +MG 
Sbjct: 186 DSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFH-SGKWGVSARILSDMMRMGI 244

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PDV+T++A+++ F + G+L +AKK   +M      PN V+Y + +NGLC +G   EA++
Sbjct: 245 HPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKK 304

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           ++N    + + PNA+TY+ +++G  +  ++ +A  ++  M   G        N L Q  C
Sbjct: 305 VLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYC 364

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + G+ + A+K +   ++ G   ++  F  L+ G C+ G +E+AL  L+D+   +     +
Sbjct: 365 QAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGII 424

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           TY  II  + K  +VE+A  L   +  KG+ P V+TY T++
Sbjct: 425 TYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMM 465



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 204/414 (49%), Gaps = 13/414 (3%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L  ++K K  +    + R +   GI     +FS L+  + R  +L  A+  L  M K  
Sbjct: 79  LLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLG 138

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
             P+++   + ++     N++ +A+  ++++   G  PNV+ YN +I   C+  ++  A+
Sbjct: 139 FEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTAL 198

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKR----IKEVRDLMEKMVNDS--------NLF 314
            +++ M   G  PD ++Y +++  L    +     + + D+M   ++          ++F
Sbjct: 199 DVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVF 258

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
             +G++ EAK+  ++M Q    P++VTY +++NG C  G LD+AKK+L  M   G  PN 
Sbjct: 259 GKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNA 318

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V+Y   +NG C + +  +A +++     +    +  TY+ +  G  + G+ + A  V+  
Sbjct: 319 VTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLAR 378

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MV  G  P     N+L+  LC  GK++ A   +++       V ++ +  +I+G C+   
Sbjct: 379 MVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANK 438

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM-LSKGLVP 547
           +E+A  L   + L    PD +TYTT++  L +     EA EL  KM    GL+P
Sbjct: 439 VEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 202/429 (47%), Gaps = 25/429 (5%)

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           K   AL     M  +   P+++ ++ L+     L + +  I L   + + G S D  S+ 
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
           T++   C+                         R+  A   + +M ++G  P +VT+ ++
Sbjct: 113 TLIDCFCR-----------------------CSRLSLALSCLGKMMKLGFEPSIVTFGSL 149

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           VNGFC V  + +A  ++ Q+   G +PN V Y   ++ LC N +   A +++N  E+   
Sbjct: 150 VNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGI 209

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+ ITY+ ++  L   GK   +  ++ +M++ G  P  +  + +I    +EG++  AKK
Sbjct: 210 RPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKK 269

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
              E + +    N+V + SLI G C  G L+EA  +L+ M      P+ VTY T+++   
Sbjct: 270 QYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYC 329

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY 585
           K+ RV++A +++  M   G+     TY T+   YCQ G+     K+L +M+S       Y
Sbjct: 330 KSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIY 389

Query: 586 --NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
             N +++ LC  G +E+A   L  + ++ +     T +++++          A+ + C +
Sbjct: 390 TFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSL 449

Query: 644 FNRNLIPDL 652
             + + PD+
Sbjct: 450 ALKGVSPDV 458



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 160/321 (49%), Gaps = 17/321 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y  + ++Y  +++ L + +    A  VL  M + GI  RP+  +Y  L+     +GK   
Sbjct: 174 YEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGI--RPDVITYNSLITRLFHSGKWGV 231

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           +  +LS M +  + P+++  +  I V     +L +A +  + M    + PN++TYN LI 
Sbjct: 232 SARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLIN 291

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---- 310
           G C    + +A K+++ M  KG  P+ V+Y T++   CK KR+ +   ++  M +D    
Sbjct: 292 GLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDG 351

Query: 311 -----SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                + L+      G+   A++++ +M   G +PD+ T+  +++G C  G++++A   L
Sbjct: 352 DTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKL 411

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           + +         ++Y   + G+C   K  +A  +  +   +  +P+ ITY+ +M GLRR+
Sbjct: 412 EDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRK 471

Query: 423 GKLSEACDVVREMVK-KGFFP 442
               EA ++ R+M K  G  P
Sbjct: 472 RLWLEAHELYRKMKKDDGLMP 492



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 164/355 (46%), Gaps = 2/355 (0%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           +  +A  L   M++   +P +V ++ ++    ++ + +    + + +   G   +  S++
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++  C   +   A   +    +  + P+ +T+  +++G     ++ EA  +V ++V  
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G+ P  V  N +I SLC   ++D A   +      G   +V+ + SLI      G    +
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVS 232

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             +L DM      PD +T++ +ID   K G++ EA +   +M+ + + P +VTY ++I+ 
Sbjct: 233 ARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLING 292

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            C  G +++  K+L  M+SK     A  YN ++   C    +++A KIL  +       D
Sbjct: 293 LCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGD 352

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
             T + L + Y   G    A KV  RM +  ++PD+     + + L   GK E+A
Sbjct: 353 TFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKA 407



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 135/334 (40%), Gaps = 37/334 (11%)

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
           H+ K  +A  +     E    P+ + +S ++  + +  K      + R +   G      
Sbjct: 50  HSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLY 109

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             + LI   CR  ++  A   + + +  G   ++V F SL+ GFC    ++EA+SL+D +
Sbjct: 110 SFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQI 169

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                +P+ V Y TIID+L +N +V+ A +++  M   G+ P V+TY ++I R    G+ 
Sbjct: 170 VGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKW 229

Query: 566 EDLLKLLEKML-------------------------------------SKQKCRTAYNQV 588
               ++L  M+                                     S       YN +
Sbjct: 230 GVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSL 289

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I  LC  G L+EA K+L  ++      +A T + LV  Y        A K+ C M +  +
Sbjct: 290 INGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGV 349

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             D      + +     G+   A+ ++ R V  G
Sbjct: 350 DGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCG 383


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 240/511 (46%), Gaps = 60/511 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  ++  + K  +    K +L  M + G+      ++ L+  + +AG  + A+   
Sbjct: 423 DVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYF 482

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + ++ +  N +I N  +        +A+A +F + M    I+ +V ++NC+I  YC  
Sbjct: 483 VDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQR 542

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ-- 317
             + +A  + D M   G  PD  +Y +++  LC+   + + ++ M  ++  +    ++  
Sbjct: 543 GNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTL 602

Query: 318 ----------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     G ++EA +L  +M     +PD  TYT +++GFC+ G++  A  +LQ M  
Sbjct: 603 NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLE 662

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEA---------------------------------- 393
            G  P+T++YT  LNGL + G+   A                                  
Sbjct: 663 KGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQIN 722

Query: 394 ---REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
              R M N  E E + P++ +Y+++MHG  ++G+LS    + R+MVK+G  P  V   LL
Sbjct: 723 EIERLMRNMHENEVY-PSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLL 781

Query: 451 IQSLCREGKMDGAKKFMQECL--NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           I  LC  G ++ A KF+++ +    G      ++ +LI   C+ GD++ A  L +DM   
Sbjct: 782 IFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKAL 841

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P  V  ++I+  L K G+VEEA  +   ++  G+VPT+ T+ T++H  C+  +++D 
Sbjct: 842 GVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDA 901

Query: 569 LKLLEKMLSKQKCR-----TAYNQVIENLCS 594
             L + M   + C        YN +I  LC+
Sbjct: 902 FHLKQLM---ESCGLKVDVVTYNVLITGLCN 929



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 144/568 (25%), Positives = 259/568 (45%), Gaps = 29/568 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y  +L    K   C+ A R+L  M + GIE     ++ ++    +  +   A  +L
Sbjct: 263 NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLL 322

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++  + P+    NT IH      K+  A+    +M    + P+V TY  LI GYC  
Sbjct: 323 KRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRN 382

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEKMVNDSNLFHD 316
            R  +A +++ EM + G  P +VS         K K+I +      +   ++  S L + 
Sbjct: 383 GRTDEARRVLYEMQITGVRPREVS---------KAKQILKCMLADGIDPDVITYSALING 433

Query: 317 ---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
               G I E KE++++M + G +P+ V YT +V  FC+ G   +A K    +Y  G   N
Sbjct: 434 MCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVAN 493

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
           +V + A L      G   EA +          + +  +++ ++    + G + EA  V  
Sbjct: 494 SVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYD 553

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            MV+ G+ P       L++ LC+ G +  AK+FM   L K CA++     +L+ G C+ G
Sbjct: 554 NMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHG 613

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            L+EAL L + M      PDT TYT ++D   K G++  A  L+  ML KGLVP  + Y 
Sbjct: 614 TLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYT 673

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLR 610
            +++     G+V+    + ++++ K+       AYN ++      G + E  +++  +  
Sbjct: 674 CLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHE 733

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                 +++ ++L+  Y+ KG       +   M    + PD      V+ RL++ G  E 
Sbjct: 734 NEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPD-----NVTYRLLIFGLCEY 788

Query: 671 ADT-LMLRFVER-----GHIQPKSEEHL 692
               + ++F+E+       +QPK   ++
Sbjct: 789 GLIEIAVKFLEKMVLEESGLQPKHTHYI 816



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 150/589 (25%), Positives = 256/589 (43%), Gaps = 93/589 (15%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP---------------EAFS--YLMVA 185
           +Y M + IL + ++   A  VLR +A  G  C                   FS   L+ A
Sbjct: 110 IYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPTNLFSVDLLVNA 169

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK------------------- 226
           Y + GK+ +A   +  M +     +L  CN  ++ LV  NK                   
Sbjct: 170 YVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLD 229

Query: 227 ----------------LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
                           L+KA   L++M+   + PN +TYN ++  Y    R K A++++D
Sbjct: 230 VTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILD 288

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-------------FHDQ 317
           +M   G   D  +Y  ++  LCK KR      L+++M  + NL             F  +
Sbjct: 289 DMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRM-REVNLTPDECSYNTLIHGFFGE 347

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG--------------------ELDQ 357
           G+I  A  + NQM +    P V TYTA+++G+CR G                    E+ +
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSK 407

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           AK++L+ M   G  P+ ++Y+A +NG+C  G   E +E+++  ++    PN + Y+ ++ 
Sbjct: 408 AKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVF 467

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
              + G   EA     ++ + G     V  N L+ S  REG +  A++F Q       + 
Sbjct: 468 YFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISF 527

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +V +F  +I  +CQ+G++ EA S+ D+M      PD  TY +++  L + G + +A E M
Sbjct: 528 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 587

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVI--ENLCSF 595
           + +L K       T  T++   C+ G +++ L L EKM+++      Y   I  +  C  
Sbjct: 588 VYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKR 647

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           G +  A  +L  +L      D      L+   +N+G      K A  MF
Sbjct: 648 GKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEG----QVKAASYMF 692



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 187/416 (44%), Gaps = 26/416 (6%)

Query: 156 LCQG-----AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           LCQG     AK  +  +  +      +  + L+V   + G L  A+ +   M    + P+
Sbjct: 574 LCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPD 633

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
                  +       K+  AL  L+ M   G+ P+ + Y CL+ G  +  ++K A  +  
Sbjct: 634 TYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQ 693

Query: 271 EMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHD---Q 317
           E+  K G   D ++Y ++M    K  +I E+  LM  M          + + L H    +
Sbjct: 694 EIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKK 753

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY--HHGCKPNTV 375
           G++     L   M + G  PD VTY  ++ G C  G ++ A K L++M     G +P   
Sbjct: 754 GQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHT 813

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            Y A +N  C  G    A E+    +     P+ +  S ++ GL + GK+ EA  V   +
Sbjct: 814 HYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSI 873

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGA---KKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           ++ G  PT      L+  LC+E K+D A   K+ M+ C   G  V+VV +  LI G C K
Sbjct: 874 MRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESC---GLKVDVVTYNVLITGLCNK 930

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
             + +AL L ++M      P+  TY T+  A+   G +++  +L+  +  +G+VP+
Sbjct: 931 KCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 986



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 114/518 (22%), Positives = 223/518 (43%), Gaps = 55/518 (10%)

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT---------------- 243
           S++Q++ +     I   A+H+LV     ++A+  L  + L G +                
Sbjct: 97  SIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCD 156

Query: 244 -PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
             N+ + + L+  Y    ++ DA   I  M   G      S   ++  L    + + V  
Sbjct: 157 PTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWL 216

Query: 303 LMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGC-IPDVVTYTAVVNGF 349
            +++ ++              N    QG++ +A+ ++ +M    C +P+ VTY  ++N +
Sbjct: 217 FLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKN--CRLPNAVTYNTILNWY 274

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
            + G    A ++L  M  +G + +  +Y   ++ LC   +S  A  ++    E   TP+ 
Sbjct: 275 VKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDE 334

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            +Y+ ++HG   EGK++ A  +  +M+++   P+      LI   CR G+ D A++ + E
Sbjct: 335 CSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYE 394

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
               G                +  ++ +A  +L  M     DPD +TY+ +I+ + K G 
Sbjct: 395 MQITG---------------VRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGM 439

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVI 589
           + E  E++ +M   G++P  V Y T++  +C+ G  ++ LK    +    +     N VI
Sbjct: 440 IHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDI---YRSGLVANSVI 496

Query: 590 EN--LCSF---GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
            N  LCSF   G + EA +    + R     D ++ + +++SY  +G  L A+ V   M 
Sbjct: 497 HNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMV 556

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                PD+     +   L   G   +A   M+  +E+ 
Sbjct: 557 RHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKA 594


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 216/455 (47%), Gaps = 27/455 (5%)

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           L    +M   GI PN+ T + LI  +C L+R+  A  ++ ++   G  PD  ++ T++  
Sbjct: 81  LSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRG 140

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           +  E +I E   L +KM+ +                       G  PDVVTY  ++NG C
Sbjct: 141 IYVEGKIGEALHLFDKMIGE-----------------------GFRPDVVTYGTLINGLC 177

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +VG    A ++L  M    C+PN  +Y   ++ LC + +  EA  + +    +  +P+  
Sbjct: 178 KVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIF 237

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY+ ++H L    +      ++ EMV     P  V  N ++ +LC+EGK+  A   + + 
Sbjct: 238 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKM 297

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK-DPDTVTYTTIIDALSKNGR 529
           + +G   NVV +T+L+ G C   +++EA+ + D M +CK   P+ ++Y T+I+   K  R
Sbjct: 298 IQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTM-VCKGCMPNVISYNTLINGYCKIQR 356

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQ 587
           +++A  L  +M  + L+P  VTY T+IH  C V R++D + L  +M+  S+      Y  
Sbjct: 357 IDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRI 416

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +++ LC   YL EA  +L  +  +    D    ++ ++     G    A  +   + ++ 
Sbjct: 417 LLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG 476

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L PD+     +   L   G  +EA  L     E G
Sbjct: 477 LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 511



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 233/483 (48%), Gaps = 20/483 (4%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI         L+ ++    ++  A  VL+ + K    P+     T I  + V  K
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +AL   ++M   G  P+V+TY  LI G C +     AI+L+  M  K C P+  +Y T
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 287 VMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQGRIEEAKE---LVNQMSQMG 334
           ++  LCK++++ E  +L  +MV           ++L H    + E K    L+N+M    
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            +PDVV++  VV+  C+ G++ +A  ++ +M   G +PN V+YTA ++G C   +  EA 
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           ++ +T   +   PN I+Y+ +++G  +  ++ +A  +  EM ++   P  V  + LI  L
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 386

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C   ++  A     E +      N+V +  L+   C+   L EA++LL  +     DPD 
Sbjct: 387 CHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDI 446

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
                 ID + + G +E A +L   + SKGL P V TY  +I+  C+ G +++  KL  +
Sbjct: 447 QVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFRE 506

Query: 575 MLSKQKCRTAYNQVIENLCSFGYL-----EEAGKILGKVLRTASKADASTCHVLVESYLN 629
           M  +  C    N  I N  + G+L       A ++L +++     ADAST  + V+   +
Sbjct: 507 M-DENGC--TLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD 563

Query: 630 KGI 632
            G+
Sbjct: 564 DGL 566



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 210/435 (48%), Gaps = 20/435 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  + + G +     F+ L+      GK+  A+++   M      P+++   T I+
Sbjct: 115 AFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLIN 174

Query: 220 VLV-VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
            L  VGN  A A+R L  M      PNV  YN +I   C   ++ +A  L  EM  KG S
Sbjct: 175 GLCKVGNTSA-AIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS 233

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKE 325
           PD  +Y +++  LC     K V  L+ +MV DS +  D             +G++ EA +
Sbjct: 234 PDIFTYNSLIHALCNLCEWKHVATLLNEMV-DSKIMPDVVSFNTVVDALCKEGKVTEAHD 292

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           +V++M Q G  P+VVTYTA+++G C + E+D+A K+   M   GC PN +SY   +NG C
Sbjct: 293 VVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYC 352

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
              +  +A  +      +   P+ +TYS ++HGL    +L +A  +  EMV     P  V
Sbjct: 353 KIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLV 412

Query: 446 EINLLIQSLCREGKMDGAKKFMQ--ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
              +L+  LC+   +  A   ++  E  N    + V N    I G C+ G+LE A  L  
Sbjct: 413 TYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA--IDGMCRAGELEAARDLFS 470

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           ++      PD  TY+ +I+ L + G ++EA++L  +M   G       Y T+   + +  
Sbjct: 471 NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 530

Query: 564 RVEDLLKLLEKMLSK 578
                ++LL++M+++
Sbjct: 531 ETSRAIQLLQEMVAR 545



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 224/516 (43%), Gaps = 14/516 (2%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ + ++       + +   M    + PN+   +  I+     N++  A   L ++ 
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+  T+  LI+G     +I +A+ L D+M  +G  PD V+Y T++  LCK     
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 299 EVRDLMEKMVNDS---NLFHDQGRIE---------EAKELVNQMSQMGCIPDVVTYTAVV 346
               L+  MV  +   N+F     I+         EA  L ++M   G  PD+ TY +++
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C + E      +L +M      P+ VS+   ++ LC  GK  EA ++++   +    
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN +TY+ +M G     ++ EA  V   MV KG  P  +  N LI   C+  ++D A   
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYL 363

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
             E   +    + V +++LI G C    L++A++L  +M  C + P+ VTY  ++D L K
Sbjct: 364 FGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCK 423

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTA 584
           N  + EA  L+  +    L P +      I   C+ G +E    L   + SK  Q     
Sbjct: 424 NRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWT 483

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           Y+ +I  LC  G L+EA K+  ++       +    + +   +L       A ++   M 
Sbjct: 484 YSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMV 543

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
            R    D        + L  +G  +    ++  FV+
Sbjct: 544 ARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 182/387 (47%), Gaps = 27/387 (6%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSM 201
           Y  +++ L K +    A  +   M  +GI   P+ F+Y  L+ A     + ++   +L+ 
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGIS--PDIFTYNSLIHALCNLCEWKHVATLLNE 261

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M  + + P+++  NT +  L    K+ +A   +++M   G+ PNV+TY  L+ G+C L  
Sbjct: 262 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE 321

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A+K+ D M  KGC P+ +SY T++   CK +RI                       +
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRI-----------------------D 358

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +A  L  +M +   IPD VTY+ +++G C V  L  A  +  +M      PN V+Y   L
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 418

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           + LC N    EA  ++   E     P+    ++ + G+ R G+L  A D+   +  KG  
Sbjct: 419 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 478

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P     +++I  LCR G +D A K  +E    GC +N   + ++ RGF +  +   A+ L
Sbjct: 479 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQL 538

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNG 528
           L +M       D  T T  +  LS +G
Sbjct: 539 LQEMVARGFSADASTMTLFVKMLSDDG 565



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 173/400 (43%), Gaps = 56/400 (14%)

Query: 312 NLFHDQG----RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N FH +      I+ A    N+M +M   P  V +  ++    ++        +  QM  
Sbjct: 30  NRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDS 89

Query: 368 HGCKPNTVSYTAFLNGLCH-----------------------------------NGKSLE 392
            G  PN  +    +N  CH                                    GK  E
Sbjct: 90  FGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGE 149

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A  + +    E + P+ +TY  +++GL + G  S A  ++  MV+K   P     N +I 
Sbjct: 150 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIID 209

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           SLC++ ++  A     E + KG + ++  + SLI   C   + +   +LL++M   K  P
Sbjct: 210 SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP 269

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           D V++ T++DAL K G+V EA +++ KM+ +G+ P VVTY  ++  +C +  +++ +K+ 
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329

Query: 573 EKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY--- 627
           + M+ K       +YN +I   C    +++A  + G++ R     D  T   L+      
Sbjct: 330 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 389

Query: 628 --LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
             L   I L    VAC       IP+L     V+ R++L+
Sbjct: 390 ERLQDAIALFHEMVACSQ-----IPNL-----VTYRILLD 419



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 148/311 (47%), Gaps = 14/311 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  +++ L K      A  V+  M +RG+E     ++ LM  +    ++  A+ V 
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M      PN++  NT I+      ++ KA+     M    + P+ +TY+ LI G C +
Sbjct: 330 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 389

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD--- 316
            R++DAI L  EM      P+ V+Y  ++ YLCK + + E   L+ K +  SNL  D   
Sbjct: 390 ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL-KAIEGSNLDPDIQV 448

Query: 317 ----------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                      G +E A++L + +S  G  PDV TY+ ++NG CR G LD+A K+ ++M 
Sbjct: 449 NNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMD 508

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
            +GC  N   Y     G   N ++  A +++       ++ +A T ++ +  L  +G   
Sbjct: 509 ENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQ 568

Query: 427 EACDVVREMVK 437
               ++RE V+
Sbjct: 569 SLKQILREFVQ 579


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 214/468 (45%), Gaps = 57/468 (12%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   G+E     F+ L+  Y +  ++  A  +   M +  +AP++      I+ L   N+
Sbjct: 454 MINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNE 513

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +A+A +  + M    I P  +TYN +I+GYC  H +  A +L+++M   G  PD  +Y  
Sbjct: 514 MAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRP 573

Query: 287 VMGYLCKEKRIKEVRDLMEKM------VND---SNLFHD---QGRIEEAKE--------- 325
           ++  LC   R+   +D ++ +      +N+   S L H    QGR+ EA           
Sbjct: 574 LISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRG 633

Query: 326 --------------------------LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                                     L+ +M   G  PD V YT++++ + + G   ++ 
Sbjct: 634 INMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSG 693

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           + L  M    C PN V+YTAF+NGLC  G+   A  +         +PN++TY   +  L
Sbjct: 694 ECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSL 753

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            +EG + EA D+  EM+K G        N+LI+  C+ G++  A K + E    G   + 
Sbjct: 754 TKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDC 812

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           + ++++I   C+ GD+  A+ L D M     +PD+V +  +I     NG +++A EL   
Sbjct: 813 ITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRND 872

Query: 540 MLSKGLVPTVV---------TYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           MLS+GL P  +             ++H  C  G V+  L+L   ML++
Sbjct: 873 MLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTR 920



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 142/577 (24%), Positives = 251/577 (43%), Gaps = 49/577 (8%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   G      A S L+    + G + +A  ++  + +    PNL + N  I+ L  G  
Sbjct: 314 MVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGED 373

Query: 227 LAKAL-----------------------------------RFLERMQLAGITPNVLTYNC 251
           L KA                                     +  RM   GI   +  YN 
Sbjct: 374 LDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNS 433

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK----EKRIKEVRDLMEKM 307
           LI G+C    +  A  L  +M  +G  P   ++ T++   CK    EK  K  R++ EK 
Sbjct: 434 LINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKE 493

Query: 308 VNDS-----NLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
           +  S      L +       + EA +L ++M +    P  VTY  ++ G+C+   +D+A 
Sbjct: 494 IAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAF 553

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++L+ M H+G  P+T +Y   ++GLC  G+   A++ I+   ++    N + YS ++HG 
Sbjct: 554 ELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGY 613

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
             +G+L+EA     EM+++G     V   +LI    ++  M      +++  ++G   + 
Sbjct: 614 CGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDS 673

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           V +TS+I  + ++G  +++   LD M   K  P+ VTYT  ++ L K G ++ A  L  K
Sbjct: 674 VIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEK 733

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA-YNQVIENLCSFGYL 598
           ML+  + P  VTY   +    + G +++   L  +ML      TA YN +I   C  G L
Sbjct: 734 MLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILIRGFCKLGRL 793

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
            EA K+L ++       D  T   ++  +   G    A ++   M  + + PD      +
Sbjct: 794 IEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLL 853

Query: 659 SERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQ 695
                + G  ++A  L    + RG ++P+    LQ++
Sbjct: 854 IYGCCVNGALDKAFELRNDMLSRG-LKPRQILQLQKR 889



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 146/633 (23%), Positives = 273/633 (43%), Gaps = 69/633 (10%)

Query: 87  LRSAWSPKLEGELRNLLRSLKPRQICAVL-RSQADERVALQFFYWADRQWRYRHDPIVYY 145
           +R   S K+     ++  +LKP  +  VL  +  D ++AL+FF +        H    + 
Sbjct: 41  VRGNLSWKIAFNDPSISSTLKPHHVEQVLINTLHDSKLALRFFNFLGLHKNMNHTTTSFA 100

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGI--------------ECRPEA---FSYLMVAYSR 188
           +++  L + KL   A  +L  +  RG               +C+  +   F +L+ +Y +
Sbjct: 101 ILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQ 160

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN--- 245
             ++ +A+ VL +M    + P +   +  ++ L+   K        +    AG+ P+   
Sbjct: 161 NTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYT 220

Query: 246 --------------------------------VLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
                                           ++TYN LI G C    + +A+++   + 
Sbjct: 221 CSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLR 280

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIE 321
            KG   D V+Y T++   C+ ++  +   LM +MV    +               +G I+
Sbjct: 281 EKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNID 340

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A +LV ++ + G +P++  Y A++N  C+  +LD+A+ + + M+      N V+Y+  +
Sbjct: 341 SAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILI 400

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +  C  G    A        E+        Y+ +++G  + G LS A  +  +M+ +G  
Sbjct: 401 DSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLE 460

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           PT      LI   C++ +++ A K  +E   K  A +V  FT+LI G C   ++ EA  L
Sbjct: 461 PTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKL 520

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            D+M   K  P  VTY  +I+   K   +++A EL+  ML  GLVP   TYR +I   C 
Sbjct: 521 FDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCS 580

Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            GRV      ++ +  K  +     Y+ ++   C  G L EA     ++++     D   
Sbjct: 581 TGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDL-V 639

Query: 620 CH-VLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           CH VL++  + +      + +  +M+++ L PD
Sbjct: 640 CHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPD 672



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/596 (22%), Positives = 259/596 (43%), Gaps = 54/596 (9%)

Query: 108 PRQICAVLRSQADER---VALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           P    AV+RS  + +    A +   W +   R+    + Y +++  L K      A  V 
Sbjct: 218 PYTCSAVIRSLCELKDFCRAKEKILWMESN-RFDLSIVTYNVLIHGLCKGGGVLEALEVR 276

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           + +  +G++     +  L++ + R  +  + + +++ M +    P     +  +  L   
Sbjct: 277 KSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKK 336

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             +  A   + ++   G  PN+  YN LI   C    +  A  L   M       + V+Y
Sbjct: 337 GNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTY 396

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQ---GRIEEAKELVNQMSQ 332
             ++   CK   +        +M+ D         ++L +     G +  A+ L  +M  
Sbjct: 397 SILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMIN 456

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G  P   T+T +++G+C+  ++++A K+ ++M      P+  ++TA + GLC   +  E
Sbjct: 457 EGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAE 516

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A ++ +   E    P  +TY+V++ G  +   + +A +++ +M+  G  P       LI 
Sbjct: 517 ASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLIS 576

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS------------ 500
            LC  G++  AK F+ +   K   +N + +++L+ G+C +G L EALS            
Sbjct: 577 GLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINM 636

Query: 501 -----------------------LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
                                  LL  MY     PD+V YT++IDA SK G  +++ E +
Sbjct: 637 DLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECL 696

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSF 595
             M+++   P VVTY   ++  C+VG ++    L EKML+         Y   +++L   
Sbjct: 697 DLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKE 756

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           G ++EA  +  ++L+    A+ +T ++L+  +   G  + A KV   M    + PD
Sbjct: 757 GNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPD 811


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 186/391 (47%), Gaps = 33/391 (8%)

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           CN+ +  L       +    +E+M    I PNV+T+  LI   C   R+ DA++++++M 
Sbjct: 308 CNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMS 367

Query: 274 ----LKGCS----PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
                 G S    PD V Y T++  LCK  R +E   LME+M                  
Sbjct: 368 GGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERM------------------ 409

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
                SQ GC PD +TY  +++GFC+ GE+++ K++  +M   G  PN V+    + G+C
Sbjct: 410 ----RSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMC 465

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G+   A      ++      +A+TY+ +++         +A ++  EM+K G  P  +
Sbjct: 466 RTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAI 525

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               LI    + G+M  A   + E    G   + V + +LI GFC+         +L +M
Sbjct: 526 VYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEM 585

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 PDT+TY T+I   SKNG ++ A ++M KM+  G+VPTV TY  VI+ YC  G  
Sbjct: 586 EEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNG 645

Query: 566 EDLLKLLEKMLSKQKC---RTAYNQVIENLC 593
            + +++ + M +  K       YN +I +LC
Sbjct: 646 NEAMEIFKDMKAASKVPPNTVIYNILINSLC 676



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 213/474 (44%), Gaps = 33/474 (6%)

Query: 131 ADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR---------VLRLMARRGIECRPEAFSY 181
            +R W    + I    +LE  +   L  G  R         ++  M    I+     F  
Sbjct: 286 TNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGI 345

Query: 182 LMVAYSRAGKLRNAMYVLSMMQ--------KAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           L+    +  ++ +A+ VL  M           +V P+++I NT I  L    +  + L  
Sbjct: 346 LINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGL 405

Query: 234 LERMQLA-GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
           +ERM+   G  P+ +TYNCLI G+C    I+   +L DEM  +G +P+ V+  T++G +C
Sbjct: 406 MERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMC 465

Query: 293 KEKRIKEVRDLM-----EKMVNDS-------NLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
           +  R+    +         M  D+       N F +    E+A EL N+M + GC PD +
Sbjct: 466 RTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAI 525

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
            Y  +++GF + G +  A  +L ++   G +P+TV Y   + G C   K     EM+   
Sbjct: 526 VYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEM 585

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           EE    P+ ITY+ ++    + G L  A  V+R+M+K G  PT      +I + C  G  
Sbjct: 586 EEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNG 645

Query: 461 DGAKKFMQECLNKGCAV--NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           + A +  ++ +     V  N V +  LI   C+   ++ A+SL++DM +    P+T TY 
Sbjct: 646 NEAMEIFKD-MKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYN 704

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
            I   L     +E+  E M +M+     P  +T   +      VG +E L K +
Sbjct: 705 AIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFV 758



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 223/490 (45%), Gaps = 42/490 (8%)

Query: 154 TKLCQGAKR-----VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVA 208
           T+LC+  K      +   M + G      A + L+   +R G       ++  M +  + 
Sbjct: 278 TRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQ 337

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERM----QLAGIT----PNVLTYNCLIKGYCDLH 260
           PN++     I+ +    ++  AL  LE+M    +  GI+    P+V+ YN LI G C + 
Sbjct: 338 PNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVG 397

Query: 261 RIKDAIKLIDEM-PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           R ++ + L++ M   KGC+PD ++Y  ++   CK                        G 
Sbjct: 398 RQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCK-----------------------AGE 434

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           IE+ KEL ++M++ G  P+VVT   +V G CR G +  A     +    G K + V+YTA
Sbjct: 435 IEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTA 494

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +N  C+     +A E+ N   +   +P+AI Y  ++ G  + G++++A  V+ E+ K G
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  V  N LI   CR  K     + ++E    G   + + + +LI    + GDL+ A 
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQ 614

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM--MKMLSKGLVPTVVTYRTVIH 557
            ++  M      P   TY  +I+A   NG   EA E+   MK  SK + P  V Y  +I+
Sbjct: 615 KVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASK-VPPNTVIYNILIN 673

Query: 558 RYCQVGRVEDLLKLLE--KMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
             C+  +V+  + L+E  K+       T YN + + L     LE+  + + +++  A   
Sbjct: 674 SLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNP 733

Query: 616 DASTCHVLVE 625
           D  T  +L E
Sbjct: 734 DYITMEILTE 743



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 178/383 (46%), Gaps = 55/383 (14%)

Query: 140 DPIVYYMMLEILSKTKLCQ-GAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAM 196
           D ++Y  +++ L K    Q G   + R+ +++G  C P+  +Y  L+  + +AG++    
Sbjct: 382 DVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKG--CAPDTITYNCLIDGFCKAGEIEKGK 439

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +   M K  VAPN++  NT +  +    +++ A+ F    Q  G+  + +TY  LI  +
Sbjct: 440 ELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAF 499

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM---------------------------- 288
           C+++  + A++L +EM   GCSPD + YYT++                            
Sbjct: 500 CNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDT 559

Query: 289 -------GYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVN 328
                  G  C+  +   V +++++M  ++ L  D              G ++ A++++ 
Sbjct: 560 VCYNTLIGGFCRTNKFHRVFEMLKEM-EEAGLKPDTITYNTLIAYASKNGDLKFAQKVMR 618

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVSYTAFLNGLCHN 387
           +M + G +P V TY AV+N +C  G  ++A ++ + M       PNTV Y   +N LC N
Sbjct: 619 KMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKN 678

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            K   A  ++   +    TPN  TY+ +  GLR E  L +  + +  M++    P  + +
Sbjct: 679 NKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITM 738

Query: 448 NLLIQSLCREGKMDGAKKFMQEC 470
            +L + L   G+++  KKF+  C
Sbjct: 739 EILTEWLSAVGEIERLKKFVAGC 761



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/383 (22%), Positives = 167/383 (43%), Gaps = 34/383 (8%)

Query: 261 RIKDAIKLIDEM----PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           R+KDA+K+IDEM        C P+  +   +  +L K +R +E+  L E           
Sbjct: 205 RVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEEL--LSE----------- 251

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
               +E   LV +  + G +        ++   CR  + ++   +  +M   G    + +
Sbjct: 252 ----DEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAA 307

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM- 435
             + L GL   G      E++    E    PN +T+ ++++ + +  ++ +A +V+ +M 
Sbjct: 308 CNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMS 367

Query: 436 -------VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN-KGCAVNVVNFTSLIR 487
                  +     P  V  N LI  LC+ G+       M+   + KGCA + + +  LI 
Sbjct: 368 GGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLID 427

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC+ G++E+   L D+M      P+ VT  T++  + + GRV  A    ++   +G+  
Sbjct: 428 GFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKG 487

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKI 604
             VTY  +I+ +C V   E  ++L  +ML K  C      Y  +I      G + +A  +
Sbjct: 488 DAVTYTALINAFCNVNNFEKAMELFNEML-KSGCSPDAIVYYTLISGFSQAGRMADASFV 546

Query: 605 LGKVLRTASKADASTCHVLVESY 627
           L ++ +   + D    + L+  +
Sbjct: 547 LAELKKLGIRPDTVCYNTLIGGF 569



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 127/273 (46%), Gaps = 21/273 (7%)

Query: 373 NTVSYTAFLNGLCHNGKSLEA----REMINTSEEEWWTPNAIT----YSVVMHGLRREGK 424
           NT     +L+ L  +G+  +A     EM  ++++    PN  T    +S ++   R E  
Sbjct: 189 NTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEEL 248

Query: 425 LSE--ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           LSE    ++V +  + G   +   +  LI  LCR  K +       E +  G  +     
Sbjct: 249 LSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAAC 308

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM-- 540
            SL+ G  ++G+      L++ M      P+ VT+  +I+ + K  RV++A E++ KM  
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSG 368

Query: 541 ------LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIEN 591
                 +S  + P VV Y T+I   C+VGR ++ L L+E+M S++ C      YN +I+ 
Sbjct: 369 GKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDG 428

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
            C  G +E+  ++  ++ +     +  T + LV
Sbjct: 429 FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLV 461


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 241/517 (46%), Gaps = 39/517 (7%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRN--AMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           +  RG+   P+ F    +     G  +N  A  VL  + +   A +   CN  +  L  G
Sbjct: 237 LGERGV--FPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRG 294

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS------ 278
             + +    L  M+   I P+V+T+  L+   C   RI +A+++ D +  KG S      
Sbjct: 295 RDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVE 354

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI-- 336
           PD V + T++  LCK  + ++   L+E+M                        +MG I  
Sbjct: 355 PDVVLFNTLIDGLCKVGKEEDGLSLLEEM------------------------KMGNINR 390

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P+ VTY  +++GF + G  D+A ++ +QM   G +PN ++    ++GLC +G+   A E 
Sbjct: 391 PNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEF 450

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
            N  + +    NA TY+ ++        ++ A     EM+  G  P  V    LI  LC 
Sbjct: 451 FNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCI 510

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            G+M+ A   + +    G +++   +  LI GFC+K  LE    LL +M      PDT+T
Sbjct: 511 AGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTIT 570

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y T+I  L K G    A+++M KM+ +GL P+VVTY  +IH YC    V++ +K+  +M 
Sbjct: 571 YNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMC 630

Query: 577 SKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           S  K       YN +I+ LC    ++ A  ++  +     + + +T + +++   +K + 
Sbjct: 631 STSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKML 690

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
             A+++  RM      PD    + ++E L   G+ E+
Sbjct: 691 HKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK 727



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 200/447 (44%), Gaps = 20/447 (4%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQK-- 204
           +L  L + +  +    +L  M +R I      F  L+    +A ++  A+ V   ++   
Sbjct: 287 LLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKG 346

Query: 205 ----AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT-PNVLTYNCLIKGYCDL 259
                 V P++++ NT I  L    K    L  LE M++  I  PN +TYNCLI G+   
Sbjct: 347 GSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKA 406

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
                A +L  +M  +G  P+ ++  T++  LCK  R+    +   +M            
Sbjct: 407 GNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATY 466

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               + F     I  A +   +M   GC PD V Y ++++G C  G ++ A  ++ ++  
Sbjct: 467 TALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKL 526

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G   +   Y   ++G C   K     E++   EE    P+ ITY+ ++  L + G  + 
Sbjct: 527 AGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFAT 586

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD-GAKKFMQECLNKGCAVNVVNFTSLI 486
           A  V+ +M+K+G  P+ V    +I + C +  +D G K F + C       N V +  LI
Sbjct: 587 ASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILI 646

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
              C+  D++ A+SL++DM + +  P+T TY  I+  +     + +A ELM +M+ +   
Sbjct: 647 DALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACR 706

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLE 573
           P  +T   +      VG +E L   +E
Sbjct: 707 PDYITMEVLTEWLSAVGEIEKLKHFVE 733



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 175/431 (40%), Gaps = 30/431 (6%)

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
           R  DA+ ++DEMP         S ++V G +           +  ++V     F D    
Sbjct: 189 RAGDALHVLDEMPQAN------SGFSVTGEI-----------VFGELVRSGRSFPDG--- 228

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            E   LV ++ + G  PD    T +V   C   +   A ++L  +   G   +  S  A 
Sbjct: 229 -EVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNAL 287

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG- 439
           L  L          E++   E+    P+ +T+ ++++ L +  ++ EA  V   +  KG 
Sbjct: 288 LTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGG 347

Query: 440 -----FFPTPVEINLLIQSLCREGKMDGAKKFMQEC-LNKGCAVNVVNFTSLIRGFCQKG 493
                  P  V  N LI  LC+ GK +     ++E  +      N V +  LI GF + G
Sbjct: 348 SNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAG 407

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           + + A  L   M      P+ +T  T++D L K+GRV  A E   +M  KGL     TY 
Sbjct: 408 NFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYT 467

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRT 611
            +I  +C V  +   ++  E+MLS      A  Y  +I  LC  G + +A  ++ K+   
Sbjct: 468 ALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLA 527

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
               D S  +VL+  +  K      Y++   M    + PD      +   L   G    A
Sbjct: 528 GFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATA 587

Query: 672 DTLMLRFVERG 682
             +M + ++ G
Sbjct: 588 SKVMEKMIKEG 598



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 101/238 (42%), Gaps = 24/238 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D +VYY ++  L        A  V+  +   G       ++ L+  + +  KL     +L
Sbjct: 497 DAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELL 556

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + M++  V P+ +  NT I  L      A A + +E+M   G+ P+V+TY  +I  YC  
Sbjct: 557 TEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSK 616

Query: 260 HRIKDAIKLIDEM-PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
             + + +K+  EM       P+ V Y  ++  LC+   +     LME M           
Sbjct: 617 KNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDM----------- 665

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +++  +            P+  TY A++ G      L +A +++ +M    C+P+ ++
Sbjct: 666 KVKRVR------------PNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYIT 711


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 179/314 (57%), Gaps = 2/314 (0%)

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           ++A +L+++M   GC PD+VTY  VVNG C+ G +D A + L+ +  +GC+PNTVSY   
Sbjct: 9   KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 68

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           L GLC   +  +A E++    ++   PN +T+++++  L R+G +  A +V+ ++ K G 
Sbjct: 69  LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 128

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  +  N L+ + C++ KMD A  F+   +++GC  ++V++ +L+   C+ G+++ A+ 
Sbjct: 129 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 188

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           LL  +      P  ++Y T+ID L+K G+ +EA EL+ +M+SKGL P ++TY T+    C
Sbjct: 189 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 248

Query: 561 QVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           +  R+ED ++   K+  +  +     YN +I  LC       A  +   ++      + S
Sbjct: 249 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 308

Query: 619 TCHVLVESYLNKGI 632
           T  +L+E    +G+
Sbjct: 309 TYTILIEGLAYEGL 322



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 188/354 (53%), Gaps = 23/354 (6%)

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
           + AM +L  M+     P+++  N  ++ +    ++  A+ FL+ +   G  PN ++YN +
Sbjct: 9   KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 68

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           +KG C   R +DA +L+ EM  KGC P+ V++  ++ +LC+                   
Sbjct: 69  LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR------------------- 109

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
               +G +E A E++ Q+ + GC P+ ++Y  +++ FC+  ++D+A   L  M   GC P
Sbjct: 110 ----KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 165

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           + VSY   L  LC +G+   A E+++  +++   P  I+Y+ V+ GL + GK  EA +++
Sbjct: 166 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 225

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            EMV KG  P  +  + +   LCRE +++ A +   +  + G   N V + ++I G C++
Sbjct: 226 NEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR 285

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            +   A+ L   M      P+  TYT +I+ L+  G ++EA +L+ ++ S+G+V
Sbjct: 286 RETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 339



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 187/377 (49%), Gaps = 34/377 (9%)

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C     K A+KL+DEM  KGC+PD V+Y  V+  +C+E                      
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE---------------------- 40

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            GR+++A E +  +   GC P+ V+Y  V+ G C     + A++++ +M   GC PN V+
Sbjct: 41  -GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 99

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           +   ++ LC  G    A E++    +   TPN+++Y+ ++H   ++ K+ +A   +  MV
Sbjct: 100 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 159

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            +G +P  V  N L+ +LCR G++D A + + +  +KGCA  ++++ ++I G  + G  +
Sbjct: 160 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 219

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           EAL LL++M      PD +TY+TI   L +  R+E+A     K+   G+ P  V Y  +I
Sbjct: 220 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII 279

Query: 557 HRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
              C+       + L   M+        + Y  +IE L   G ++EA  +L ++      
Sbjct: 280 LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG-- 337

Query: 615 ADASTCHVLVESYLNKG 631
                  V+ +S +NKG
Sbjct: 338 -------VVRKSLINKG 347



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 138/280 (49%), Gaps = 14/280 (5%)

Query: 174 CRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P   SY +V      A +  +A  ++  M +    PN++  N  I  L     +  AL
Sbjct: 58  CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 117

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
             LE++   G TPN L+YN L+  +C   ++  A+  +D M  +GC PD VSY T++  L
Sbjct: 118 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 177

Query: 292 CKEKRIKEVRDLMEKMVNDS--------NLFHD----QGRIEEAKELVNQMSQMGCIPDV 339
           C+   +    +L+ ++ +          N   D     G+ +EA EL+N+M   G  PD+
Sbjct: 178 CRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 237

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           +TY+ +  G CR   ++ A +   ++   G +PNTV Y A + GLC   ++  A ++   
Sbjct: 238 ITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAY 297

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
                  PN  TY++++ GL  EG + EA D++ E+  +G
Sbjct: 298 MIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 337



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 129/255 (50%), Gaps = 5/255 (1%)

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
           +R G   +A  ++ EM  KG  P  V  N+++  +C+EG++D A +F++   + GC  N 
Sbjct: 4   KRSG-YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           V++  +++G C     E+A  L+ +M      P+ VT+  +I  L + G VE A E++ +
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFG 596
           +   G  P  ++Y  ++H +C+  +++  +  L+ M+S+  C     +YN ++  LC  G
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR-GCYPDIVSYNTLLTALCRSG 181

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
            ++ A ++L ++          + + +++     G    A ++   M ++ L PD+    
Sbjct: 182 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 241

Query: 657 KVSERLILEGKSEEA 671
            ++  L  E + E+A
Sbjct: 242 TIAAGLCREDRIEDA 256



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 4/170 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + Y  +L  L ++     A  +L  +  +G  C P   SY  V    ++AGK + A+ 
Sbjct: 166 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKG--CAPVLISYNTVIDGLTKAGKTKEALE 223

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L+ M    + P+++  +T    L   +++  A+R   ++Q  GI PN + YN +I G C
Sbjct: 224 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 283

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
                  AI L   M   GC P++ +Y  ++  L  E  IKE RDL++++
Sbjct: 284 KRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 333



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QK 580
           A  K    ++A +L+ +M  KG  P +VTY  V++  CQ GRV+D ++ L+ + S   + 
Sbjct: 1   ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
              +YN V++ LC+    E+A +++G++ +     +  T ++L+     KG+
Sbjct: 61  NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGL 112



 Score = 45.8 bits (107), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 60/135 (44%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y  +++ L+K    + A  +L  M  +G++     +S +     R  ++ +A+     
Sbjct: 203 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 262

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           +Q   + PN ++ N  I  L    +   A+     M   G  PN  TY  LI+G      
Sbjct: 263 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 322

Query: 262 IKDAIKLIDEMPLKG 276
           IK+A  L+DE+  +G
Sbjct: 323 IKEARDLLDELCSRG 337


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 199/428 (46%), Gaps = 25/428 (5%)

Query: 179  FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
            F+ ++ A ++  K    +Y+   M+   ++ +L      IH     ++ + AL  L +M 
Sbjct: 618  FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMM 677

Query: 239  LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
              G  P+++T   L+ G+C  +R ++A+ L+D M   G  P+ V Y TV+  LCK     
Sbjct: 678  KLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKN---- 733

Query: 299  EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
              RDL                   A E+   M + G + D VTY  +++G C  G    A
Sbjct: 734  --RDL-----------------NNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 359  KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             ++L+ M      PN + +TA ++     G  LEA+ +          PN +TY+ +++G
Sbjct: 775  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 419  LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
               +G+L +A  +   MV KG FP  V  N LI   C+  +++   K   E  ++G   +
Sbjct: 835  FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894

Query: 479  VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
               + +LI G+CQ G L  A  + + M  C   PD VTY  ++D L  NG++E+A  ++ 
Sbjct: 895  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954

Query: 539  KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
             +    +   ++TY  +I   C+  +V++   L   +  K  +    AY  +I  LC  G
Sbjct: 955  DLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014

Query: 597  YLEEAGKI 604
               EA K+
Sbjct: 1015 LRREADKL 1022



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 191/398 (47%), Gaps = 12/398 (3%)

Query: 167  MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
            M   GI     +F+ L+  + R  +   A+ +L  M K    P+++   + ++    GN+
Sbjct: 641  MENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNR 700

Query: 227  LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
              +A+  ++ M   G+ PNV+ YN +I G C    + +A+++   M  KG   D V+Y T
Sbjct: 701  FQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNT 760

Query: 287  VMGYLCKEKRIKEVRDLMEKMVN---DSNL---------FHDQGRIEEAKELVNQMSQMG 334
            ++  LC   R  +   L+  MV    D N+         F  +G + EAK L  +M +  
Sbjct: 761  LISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRS 820

Query: 335  CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
              P+++TY +++NGFC  G L  AK M   M   GC P+ V+Y   + G C + +  +  
Sbjct: 821  VHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 880

Query: 395  EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            ++      +    +A TY+ ++HG  + GKL+ A  V   MV  G  P  V  N+L+  L
Sbjct: 881  KLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCL 940

Query: 455  CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            C  GK++ A   +++       V+++ +  +I+G C+   ++EA  L   +       D 
Sbjct: 941  CNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDA 1000

Query: 515  VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
            + Y T+I  L +NG   EA +L  +M   G +P+   Y
Sbjct: 1001 IAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIY 1038



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 197/410 (48%), Gaps = 13/410 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ A +   +    +Y    M+   ++ +L      IH     ++L+ AL  L +M 
Sbjct: 68  FTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMM 127

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+++T+  L+ G+C  +RI DA  L+  M   G  P+ V Y T++  LCK   + 
Sbjct: 128 KLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVN 187

Query: 299 EVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
              +L+ +M     L  D              G   +A  ++  M++    PDV T+TA+
Sbjct: 188 IALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTAL 247

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++ F + G LD+A+++ +QM      PNTV+Y + +NGLC +G+   A++  +    +  
Sbjct: 248 IDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGC 307

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            PN +TY+ +++G  +  ++ +   + + M ++G        N LI   C+ GK+  AK 
Sbjct: 308 FPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKD 367

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
                ++ G   +++    L+ G C  G++  A+   +DM   +K    V Y  +I  L 
Sbjct: 368 IFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLC 427

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           K  +VEEA EL  ++  +G+ P   TY  +I   C+ G   +  +L  +M
Sbjct: 428 KADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRM 477



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 188/389 (48%), Gaps = 13/389 (3%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           GI     +F+ L+  + R  +L  A+ +L  M K    P+++   + +H   + N++  A
Sbjct: 95  GISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDA 154

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG-CSPDKVSYYTVMG 289
              +  M  +G  PNV+ YN LI   C    +  A++L++EM  KG  + D V+Y T++ 
Sbjct: 155 FSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLT 214

Query: 290 YLCKEKRIKE----VRDLMEKMVNDS--------NLFHDQGRIEEAKELVNQMSQMGCIP 337
            LC     ++    +RD+ ++ +N          + F  QG ++EA+EL  QM Q    P
Sbjct: 215 GLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGP 274

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           + VTY +++NG C  G L  AKK    M   GC PN V+Y   +NG C + +  +  ++ 
Sbjct: 275 NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF 334

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
                E    +  TY+ ++HG  + GKL  A D+   MV  G  P  +   +L+  LC  
Sbjct: 335 QRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVN 394

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G++  A     +  +    + +V +  +I G C+   +EEA  L   + +    PD  TY
Sbjct: 395 GEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTY 454

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLV 546
           T +I  L KNG   EA EL  +M   G++
Sbjct: 455 TIMILGLCKNGPRREADELFRRMKEDGII 483



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 215/462 (46%), Gaps = 25/462 (5%)

Query: 191  KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
            K  +A  +   M ++   P+++     +  +   NK    +    +M+  GI+ ++ ++ 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 251  CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
             LI  +C   R   A+ L+ +M   G  P  V+  +++   C+                 
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGN--------------- 699

Query: 311  SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                    R +EA  LV+ M+++G  P+VV Y  V+NG C+  +L+ A ++   M   G 
Sbjct: 700  --------RFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGI 751

Query: 371  KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
              + V+Y   ++GLC++G+  +A  ++    +    PN I ++ ++    +EG L EA +
Sbjct: 752  VADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKN 811

Query: 431  VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
            + +EM+++   P  +  N LI   C +G++  AK      ++KGC  +VV + +LI GFC
Sbjct: 812  LYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFC 871

Query: 491  QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
            +   +E+ + L  +M       D  TY T+I    + G++  A ++  +M+  G+ P +V
Sbjct: 872  KSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIV 931

Query: 551  TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKV 608
            TY  ++   C  G++E  L ++E +   Q       YN +I+ +C    ++EA  +   +
Sbjct: 932  TYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSL 991

Query: 609  LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
             R   K DA     ++      G+   A K+  RM     +P
Sbjct: 992  TRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMP 1033



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 216/475 (45%), Gaps = 51/475 (10%)

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
           FLE +Q   + P+V+ +  L+    +L R +  I    +M L G S D  S+  ++   C
Sbjct: 53  FLEMVQSQPL-PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFC 111

Query: 293 KEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVV 340
           +  R+     ++ KM         V   +L H    + RI +A  LV  M + G  P+VV
Sbjct: 112 RCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVV 171

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            Y  +++  C+ G+++ A ++L +M   G    + V+Y   L GLC++G+  +A  ++  
Sbjct: 172 VYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRD 231

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
             +    P+  T++ ++    ++G L EA ++ ++M++    P  V  N LI  LC  G+
Sbjct: 232 MTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGR 291

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +  AKK      +KGC  NVV + +LI GFC+   +E+ + L   MY      DT TY T
Sbjct: 292 LYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNT 351

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +I    + G++  A ++   M+S G+ P ++T+  ++H  C  G +   +     M S +
Sbjct: 352 LIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGE 411

Query: 580 KCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
           K     AYN +I  LC    +EEA ++  ++     K DA T  +++             
Sbjct: 412 KYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMI------------- 458

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
                         L LCK         G   EAD L  R  E G I    + HL
Sbjct: 459 --------------LGLCK--------NGPRREADELFRRMKEDGIICQAEDGHL 491



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 189/386 (48%), Gaps = 18/386 (4%)

Query: 258 DLHRIK--DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           +LH IK  DA  L  EM      P  V +  V+  + K  +   V  L  KM N   + H
Sbjct: 590 ELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMEN-LGISH 648

Query: 316 DQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
           D               R   A  L+ +M ++G  P +VT  +++NGFC+     +A  ++
Sbjct: 649 DLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLV 708

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
             M   G +PN V Y   +NGLC N     A E+    E++    +A+TY+ ++ GL   
Sbjct: 709 DSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNS 768

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G+ ++A  ++R+MVK+   P  +    LI +  +EG +  AK   +E + +    N++ +
Sbjct: 769 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTY 828

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            SLI GFC +G L +A  + D M      PD VTY T+I    K+ RVE+  +L  +M  
Sbjct: 829 NSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTH 888

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEE 600
           +GLV    TY T+IH YCQ G++    K+  +M+          YN +++ LC+ G +E+
Sbjct: 889 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEK 948

Query: 601 AGKILGKVLRTASKADASTCHVLVES 626
           A  ++  + +     D  T +++++ 
Sbjct: 949 ALVMVEDLQKNQMDVDIITYNIIIQG 974



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 178/372 (47%), Gaps = 12/372 (3%)

Query: 139  HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
            HD   + +++    +      A  +L  M + G +        L+  + +  + + A+ +
Sbjct: 648  HDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSL 707

Query: 199  LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
            +  M +  + PN++I NT I+ L     L  AL     M+  GI  + +TYN LI G C+
Sbjct: 708  VDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCN 767

Query: 259  LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
              R  DA +L+ +M  +   P+ + +  ++    KE  + E ++L ++M+  S       
Sbjct: 768  SGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILT 827

Query: 312  -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                 N F  QGR+ +AK + + M   GC PDVVTY  ++ GFC+   ++   K+  +M 
Sbjct: 828  YNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 887

Query: 367  HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
            H G   +  +Y   ++G C  GK   A+++ N   +    P+ +TY++++  L   GK+ 
Sbjct: 888  HQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIE 947

Query: 427  EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
            +A  +V ++ K       +  N++IQ +CR  K+  A    +    KG  ++ + + ++I
Sbjct: 948  KALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMI 1007

Query: 487  RGFCQKGDLEEA 498
             G C+ G   EA
Sbjct: 1008 SGLCRNGLRREA 1019



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 180/392 (45%), Gaps = 17/392 (4%)

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
            + F ++M+L GI+ ++ ++  LI  +C   R+  A+ ++ +M   G  P  V++ +++ 
Sbjct: 84  VIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLH 143

Query: 290 YLCKEKRIKEVRDLMEKMVNDS--------NLFHD----QGRIEEAKELVNQMSQMGCI- 336
             C   RI +   L+  MV           N   D     G +  A EL+N+M + G + 
Sbjct: 144 GFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLA 203

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
            D+VTY  ++ G C  GE  QA ++L+ M      P+  ++TA ++     G   EA+E+
Sbjct: 204 ADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQEL 263

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
                +    PN +TY+ +++GL   G+L  A      M  KG FP  V  N LI   C+
Sbjct: 264 YKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCK 323

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
             +++   K  Q    +G   +   + +LI G+CQ G L  A  +   M  C   PD +T
Sbjct: 324 SRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIIT 383

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           +  ++  L  NG +  A      M S      +V Y  +IH  C+  +VE+  +L  ++ 
Sbjct: 384 HCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLP 443

Query: 577 ---SKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
               K   RT Y  +I  LC  G   EA ++ 
Sbjct: 444 VEGVKPDART-YTIMILGLCKNGPRREADELF 474



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 173/365 (47%), Gaps = 10/365 (2%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           R E+A +L  +M Q   +P VV +T ++     +   +      QQM   G   +  S+T
Sbjct: 45  RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++  C   +   A  ++    +  + P+ +T+  ++HG     ++ +A  +V  MVK 
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG-CAVNVVNFTSLIRGFCQKGDLEE 497
           G+ P  V  N LI  LC+ G ++ A + + E   KG  A ++V + +L+ G C  G+  +
Sbjct: 165 GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQ 224

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A  +L DM   + +PD  T+T +IDA  K G ++EA EL  +ML   + P  VTY ++I+
Sbjct: 225 AARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLIN 284

Query: 558 RYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
             C  GR+    K  + M SK        YN +I   C    +E+  K+  ++ R     
Sbjct: 285 GLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVG 344

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG--KSEEADT 673
           D  T + L+  Y   G   +A  +   M +  + PD+     ++  ++L G   + E  +
Sbjct: 345 DTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDI-----ITHCILLHGLCVNGEIGS 399

Query: 674 LMLRF 678
            M++F
Sbjct: 400 AMVKF 404



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 149/322 (46%), Gaps = 23/322 (7%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
             D  +AL+     +++ R   D + Y  +L  L  +   + A R+LR M +R I     
Sbjct: 183 NGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVF 242

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            F+ L+ A+ + G L  A  +   M ++++ PN +  N+ I+ L +  +L  A +  + M
Sbjct: 243 TFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLM 302

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G  PNV+TYN LI G+C   R++D +KL   M  +G   D  +Y T++   C+    
Sbjct: 303 ASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQ---- 358

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                               G++  AK++ + M   G  PD++T+  +++G C  GE+  
Sbjct: 359 -------------------VGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGS 399

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A      M         V+Y   ++GLC   K  EA E+      E   P+A TY++++ 
Sbjct: 400 AMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMIL 459

Query: 418 GLRREGKLSEACDVVREMVKKG 439
           GL + G   EA ++ R M + G
Sbjct: 460 GLCKNGPRREADELFRRMKEDG 481



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 152/324 (46%), Gaps = 24/324 (7%)

Query: 120  DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF 179
            D   AL+ FY  +++     D + Y  ++  L  +     A R+LR M +R I+     F
Sbjct: 735  DLNNALEIFYGMEKKG-IVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFF 793

Query: 180  SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
            + L+  + + G L  A  +   M + +V PN+L  N+ I+   +  +L  A    + M  
Sbjct: 794  TALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVS 853

Query: 240  AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
             G  P+V+TYN LI G+C   R++D +KL  EM  +G   D  +Y T++   C+      
Sbjct: 854  KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQ------ 907

Query: 300  VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                              G++  A+++ N+M   G  PD+VTY  +++  C  G++++A 
Sbjct: 908  -----------------AGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKAL 950

Query: 360  KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
             M++ +  +    + ++Y   + G+C N K  EA  +  +   +    +AI Y  ++ GL
Sbjct: 951  VMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGL 1010

Query: 420  RREGKLSEACDVVREMVKKGFFPT 443
             R G   EA  +   M + GF P+
Sbjct: 1011 CRNGLRREADKLCTRMKEDGFMPS 1034



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 7/259 (2%)

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +H +R E    +A D+  EMV+    P+ V+   L+ ++    + +    F Q+    G 
Sbjct: 41  LHSIRFE----DALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGI 96

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
           + ++ +FT LI  FC+   L  ALS+L  M     DP  VT+ +++       R+ +A  
Sbjct: 97  SHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFS 156

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENL 592
           L+  M+  G  P VV Y T+I   C+ G V   L+LL +M  K +       YN ++  L
Sbjct: 157 LVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGL 216

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G   +A +IL  + +     D  T   L+++++ +G    A ++  +M   ++ P+ 
Sbjct: 217 CYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT 276

Query: 653 KLCKKVSERLILEGKSEEA 671
                +   L + G+   A
Sbjct: 277 VTYNSLINGLCMHGRLYHA 295


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 230/473 (48%), Gaps = 14/473 (2%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           GI       + ++  + R  K   A  VL  + K    P+    NT I+ L +  K++KA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKA 177

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           +  ++RM   G  P+++TYN ++ G C       A  ++ +M  +    D  +Y T++  
Sbjct: 178 VVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDS 237

Query: 291 LCKEKRIKEVRDLMEKM----VNDSNLFHDQ--------GRIEEAKELVNQMSQMGCIPD 338
           LC++  I     L ++M    +  S + ++         G+  +   L+  M     +P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V+T+  +++ F + G+L +A ++ ++M   G  PN ++Y   ++G C   +  EA  M++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                  +P+ +T++ ++ G     ++ +   V R + K+G     V  ++L+Q  C+ G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           K+  A++  QE ++ G   +V+ +  L+ G C  G LE+AL + +D+   K D   V YT
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           TII+ + K G+VE+A  L   +  KG+ P V+TY  +I   C+ G + +   LL KM   
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537

Query: 579 QKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
                   YN +I      G L  + K++ ++      ADAS+  ++++  L+
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 212/468 (45%), Gaps = 16/468 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS    A +R  +    +     ++   +A N+   N  I+      K   A   L ++ 
Sbjct: 91  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+  T+N LI G C   ++  A+ L+D M   GC PD V+Y +++  +C+     
Sbjct: 151 KLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTS 210

Query: 299 EVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
              D++ KM  + N+  D              G I+ A  L  +M   G    VVTY ++
Sbjct: 211 LAFDMLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           V G C+ G+ +    +L+ M      PN +++   L+     GK  EA E+         
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           +PN ITY+ +M G   + +LSEA +++  MV+    P  V    LI+  C   ++D   K
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             +    +G   N V ++ L++GFCQ G ++ A  L  +M      PD +TY  ++D L 
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
            NG++E+A E+   +    +   +V Y T+I   C+ G+VED   L   +  K  +    
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            Y  +I  LC  G L EA  +L K+    +  +  T + L+ ++L  G
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 211/430 (49%), Gaps = 12/430 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  VL  + + G E     F+ L+      GK+  A+ ++  M +    P+++  N+ ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVN 201

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            +      + A   L +M+   +  +V TY+ +I   C    I  AI L  EM  KG   
Sbjct: 202 GICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
             V+Y +++  LCK  +  +   L++ MV+              ++F  +G+++EA EL 
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M   G  P+++TY  +++G+C    L +A  ML  M  + C P+ V++T+ + G C  
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            +  +  ++     +     NA+TYS+++ G  + GK+  A ++ +EMV  G  P  +  
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            +L+  LC  GK++ A +  ++       + +V +T++I G C+ G +E+A +L   +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ +TYT +I  L K G + EA  L+ KM   G  P   TY T+I  + + G +  
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561

Query: 568 LLKLLEKMLS 577
             KL+E+M S
Sbjct: 562 SAKLIEEMKS 571



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 225/456 (49%), Gaps = 25/456 (5%)

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
            L F ++++L GI  N+ T N +I  +C   +   A  ++ ++   G  PD  ++ T++ 
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 166

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            LC E                       G++ +A  LV++M + GC PD+VTY ++VNG 
Sbjct: 167 GLCLE-----------------------GKVSKAVVLVDRMVENGCQPDMVTYNSIVNGI 203

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           CR G+   A  ML++M     K +  +Y+  ++ LC +G    A  +    E +    + 
Sbjct: 204 CRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           +TY+ ++ GL + GK ++   ++++MV +   P  +  N+L+    +EGK+  A +  +E
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            + +G + N++ + +L+ G+C +  L EA ++LD M   K  PD VT+T++I       R
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQ 587
           V++  ++   +  +GLV   VTY  ++  +CQ G+++   +L ++M+S         Y  
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +++ LC  G LE+A +I   + ++           ++E     G    A+ + C +  + 
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           + P++     +   L  +G   EA+ L+ +  E G+
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 190/387 (49%), Gaps = 23/387 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D   Y  +++ L +      A  + + M  +GI+     ++ L+    +AGK  +   
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M    + PN++  N  + V V   KL +A    + M   GI+PN++TYN L+ GYC
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
             +R+ +A  ++D M    CSPD V++ +++   C  KR+                    
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV-------------------- 384

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
              ++  ++   +S+ G + + VTY+ +V GFC+ G++  A+++ Q+M  HG  P+ ++Y
Sbjct: 385 ---DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              L+GLC NGK  +A E+    ++       + Y+ ++ G+ + GK+ +A ++   +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           KG  P  +   ++I  LC++G +  A   +++    G A N   + +LIR   + GDL  
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           +  L+++M  C    D  +   +ID L
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDML 588



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 72/166 (43%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++L+ L      + A  +   + +  ++     ++ ++    + GK+ +A  + 
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +    V PN++     I  L     L++A   L +M+  G  PN  TYN LI+ +   
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
             +  + KLI+EM   G S D  S   V+  L   +  K   D++ 
Sbjct: 557 GDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDMLS 602


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/525 (24%), Positives = 244/525 (46%), Gaps = 54/525 (10%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
            + +L LM +    C P AF+Y +V  A    G+  +A+   ++M +    P ++  NT 
Sbjct: 285 GESLLHLMPK--FHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTV 342

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I+       + +A +  + ++  G +PN + YN L+ GY  +  I  A  L +EM  KG 
Sbjct: 343 INAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGI 402

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEK-----MVNDSNLFHDQ-------GRIEEAKE 325
           +PD +++  ++    K  R ++   L++      ++ D +LF          GR++EA E
Sbjct: 403 APDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAME 462

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
            +  M + G  P ++ + +V+  + + G  D+A +  + M H G  P+  + ++ L GL 
Sbjct: 463 FLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLS 522

Query: 386 HNGKSLEAREMIN---------------------------TSEEEWWT--------PNAI 410
            NG+  EA E+I                               +  W         P+ +
Sbjct: 523 INGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVV 582

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            +S  + GL ++G + EA +V  EM++KG  P     N LI   C+ GK++ A K  +  
Sbjct: 583 AFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVM 642

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
            ++G   ++     +I G C++G +  A+++  DM+     PD +TY T+I+   K   +
Sbjct: 643 RHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDM 702

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQV 588
             A  L+ +M + G  P + TY   IH +C   R+   + +L++++S         YN +
Sbjct: 703 VNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSM 762

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           +  +CS   L+ A  +  ++L+ A   +  T ++L+  +  +G+P
Sbjct: 763 LNGVCS-DILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMP 806



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 234/494 (47%), Gaps = 27/494 (5%)

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           ++ + + RRG +     FS +++ + R G +     +L +M K    PN    N  I+  
Sbjct: 252 KLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINAC 311

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
            +  + + AL +   M   G  P V+T+N +I  +C    + +A KL D +   G SP+ 
Sbjct: 312 CIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNA 371

Query: 282 VSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
           + Y T+M GY+    +++E                    I++A  L  +M + G  PD +
Sbjct: 372 IMYNTLMNGYV----KMRE--------------------IDQANMLYEEMRKKGIAPDGI 407

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           T+  +V+G  + G  +   ++L+ +   G  P+   +   ++GLC  G+  EA E +   
Sbjct: 408 TFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDM 467

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
            E+  +P+ I ++ V+    + G   +A +  + MV  G  P+P   + L+  L   G++
Sbjct: 468 LEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRL 527

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             A + + + + KG +VN + FT L+  F ++GD+  A SL  +M      PD V ++  
Sbjct: 528 QEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAF 587

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           ID LSK G VEEA  + ++ML KGL+P    Y ++I  +C+ G++ + LKL + M  +  
Sbjct: 588 IDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGL 647

Query: 581 CRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
               +  N +I  LC  G +  A  +   + +T    D  T + L+  Y      + A  
Sbjct: 648 LPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADN 707

Query: 639 VACRMFNRNLIPDL 652
           +  RM+     PDL
Sbjct: 708 LVNRMYASGSNPDL 721



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/429 (22%), Positives = 202/429 (47%), Gaps = 23/429 (5%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           ++  +  + I+Y  ++    K +    A  +   M ++GI      F+ L+  + + G+ 
Sbjct: 363 KEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGRE 422

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            +   +L  +    + P+  + + ++  L    +L +A+ FL  M   G++P+++ +N +
Sbjct: 423 EDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSV 482

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I  Y        A +    M   G +P   +  ++               LM   +N   
Sbjct: 483 IAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSL---------------LMGLSIN--- 524

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                GR++EA EL+ QM + G   + + +T +++ F + G++  A+ +  +M   G  P
Sbjct: 525 -----GRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFP 579

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           + V+++AF++GL   G   EA  +      +   PN   Y+ ++ G  + GKL+EA  + 
Sbjct: 580 DVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLE 639

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           + M  +G  P     N++I  LC++G+M  A     +    G + +++ + +LI G+C+ 
Sbjct: 640 KVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKA 699

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
            D+  A +L++ MY    +PD  TY   I     + R+  A  ++ +++S G+VP  VTY
Sbjct: 700 FDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTY 759

Query: 553 RTVIHRYCQ 561
            ++++  C 
Sbjct: 760 NSMLNGVCS 768



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/548 (22%), Positives = 227/548 (41%), Gaps = 61/548 (11%)

Query: 173 ECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV-APNLLICNTAIHVLVVGNKLAKAL 231
           E R  A   +    +R G LR+   V  M +   V   +  + ++ +   V      +AL
Sbjct: 157 ELRHVAQDVIWWVIARIGVLRSGDLVEFMWRGHHVYESDFSVLDSLMRAFVNAEMGFQAL 216

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
             L RM+  G+ P+      L K    +    +  KL  ++  +G  P K ++  ++   
Sbjct: 217 EILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGF 276

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           C+                       +G I   + L++ M +  C P+   Y  V+N  C 
Sbjct: 277 CR-----------------------KGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCI 313

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            G    A      M   GC P  V++   +N  C  G  +EAR++ +  +E  ++PNAI 
Sbjct: 314 RGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIM 373

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL--------------------- 450
           Y+ +M+G  +  ++ +A  +  EM KKG  P  +  N+L                     
Sbjct: 374 YNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS 433

Query: 451 --------------IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
                         +  LC  G++D A +F+ + L KG + +++ F S+I  + Q G  +
Sbjct: 434 VLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLED 493

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +A      M      P   T ++++  LS NGR++EATEL+ +M+ KGL    + +  ++
Sbjct: 494 KAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLL 553

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
            ++ + G V     L  +M  +       A++  I+ L   G +EEA  +  ++LR    
Sbjct: 554 DKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLI 613

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            +    + L+  +   G    A K+   M +R L+PD+     +   L  +G+   A  +
Sbjct: 614 PNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINV 673

Query: 675 MLRFVERG 682
            +   + G
Sbjct: 674 FMDMHQTG 681



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 169/366 (46%), Gaps = 10/366 (2%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +L   + + G  P   T++ ++ GFCR G +   + +L  M    C+PN  +Y   +N  
Sbjct: 252 KLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINAC 311

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  G++ +A    N   E    P  +T++ V++   +EG + EA  +   + + GF P  
Sbjct: 312 CIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNA 371

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           +  N L+    +  ++D A    +E   KG A + + F  L+ G  + G  E+   LL D
Sbjct: 372 IMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKD 431

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           + +    PD   +   +  L   GR++EA E +M ML KGL P+++ + +VI  Y Q G 
Sbjct: 432 ISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGL 491

Query: 565 VEDLLKLLEKML------SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
            +   +  + M+      S   C +    ++  L   G L+EA +++G+++      +  
Sbjct: 492 EDKAFEAYKLMVHFGLTPSPSTCSS----LLMGLSINGRLQEATELIGQMIEKGLSVNNM 547

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
              VL++ +  +G  + A  +   M  R + PD+       + L  +G  EEA  + L  
Sbjct: 548 AFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEM 607

Query: 679 VERGHI 684
           + +G I
Sbjct: 608 LRKGLI 613



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 167/386 (43%), Gaps = 29/386 (7%)

Query: 151 LSKTKLCQG-----AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           +S + LC       A   L  M  +G+     AF+ ++ AYS+AG    A     +M   
Sbjct: 446 ISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHF 505

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            + P+   C++ +  L +  +L +A   + +M   G++ N + +  L+  +     +  A
Sbjct: 506 GLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGA 565

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
             L  EM  +G  PD V++   +  L K                       QG +EEA  
Sbjct: 566 QSLWGEMERRGIFPDVVAFSAFIDGLSK-----------------------QGLVEEAYN 602

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           +  +M + G IP+   Y +++ GFC+ G+L++A K+ + M H G  P+  +    + GLC
Sbjct: 603 VFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLC 662

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G+   A  +     +   +P+ ITY+ +++G  +   +  A ++V  M   G  P   
Sbjct: 663 KQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLT 722

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N+ I   C   +M+ A   + E ++ G   N V + S++ G C    L+ A+ L   +
Sbjct: 723 TYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSD-ILDRAMILTARL 781

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVE 531
                 P+ VT   ++    K G  E
Sbjct: 782 LKMAFVPNVVTANLLLSQFYKQGMPE 807



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 28/284 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + + ++L+   K     GA+ +   M RRGI     AFS  +   S+ G +  A  V   
Sbjct: 547 MAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLE 606

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  + PN    N+ I       KL +AL+  + M+  G+ P++ T N +I G C   R
Sbjct: 607 MLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGR 666

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           ++ AI +  +M   G SPD ++Y T++   CK             MVN  N         
Sbjct: 667 MRSAINVFMDMHQTGLSPDIITYNTLINGYCKAF----------DMVNADN--------- 707

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
               LVN+M   G  PD+ TY   ++GFC    +++A  ML ++   G  PNTV+Y + L
Sbjct: 708 ----LVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSML 763

Query: 382 NGLCHNGKSLEAREMINTSE--EEWWTPNAITYSVVMHGLRREG 423
           NG+C +   +  R MI T+   +  + PN +T ++++    ++G
Sbjct: 764 NGVCSD---ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQG 804



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 128/302 (42%), Gaps = 28/302 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +   ++ LSK  L + A  V   M R+G+     A++ L+  + + GKL  A+ + 
Sbjct: 580 DVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLE 639

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M+   + P++   N  I  L    ++  A+     M   G++P+++TYN LI GYC  
Sbjct: 640 KVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKA 699

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             + +A  L++ M   G +PD  +Y   +   C  +R+     +++++V+          
Sbjct: 700 FDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVS---------- 749

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                         G +P+ VTY +++NG C    LD+A  +  ++      PN V+   
Sbjct: 750 -------------AGIVPNTVTYNSMLNGVCS-DILDRAMILTARLLKMAFVPNVVTANL 795

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L+     G         +   E  +  + ITY +    + +   + E  D  R    K 
Sbjct: 796 LLSQFYKQGMPERTLMWGHKLSEIPYAFDEITYKI----MDKAHHILEDADFSRVTSAKS 851

Query: 440 FF 441
            F
Sbjct: 852 LF 853


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 199/393 (50%), Gaps = 20/393 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM- 237
           F+ ++     AGK   A+ +L  M +    PN +  NT I       ++  AL  +  M 
Sbjct: 117 FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 172

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG-CSPDKVSYYTVMGYLCKEKR 296
           +  GI PN  TY  +I G+C + R+ +A+K+ DEM  KG   P+ V Y  ++G  C + +
Sbjct: 173 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 232

Query: 297 IKEVRDLMEKMVNDS-------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           +       ++MV                 LF D GR  EA ELV +M   G  PDV TY 
Sbjct: 233 LDTALLYRDRMVERGVAMTVATYNLLVHALFMD-GRGTEAYELVEEMGGKGLAPDVFTYN 291

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            ++NG C+ G + +A ++ + M   G +   V+YTA +  L   G+  E  ++ + +   
Sbjct: 292 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 351

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+ + Y+ +++     G +  A +++ EM KK   P  V  N L++ LC  G++D A
Sbjct: 352 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 411

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           +K + E   +G   ++V + +LI G+  KGD+++AL + ++M     +P  +TY  +I  
Sbjct: 412 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 471

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           L KNG+ ++A  ++ +M+  G+ P   TY ++I
Sbjct: 472 LCKNGQGDDAENMVKEMVENGITPDDSTYISLI 504



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 216/424 (50%), Gaps = 35/424 (8%)

Query: 211 LLICNTAIHVLV----VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           L +C T  ++++       K A+AL  L +M      PN +TYN +I G+C   R++ A+
Sbjct: 110 LPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAAL 165

Query: 267 KLIDEMPLKG-CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
            ++ EM  +G  +P++ +Y TV+   CK                        GR++EA +
Sbjct: 166 DIMREMRERGGIAPNQYTYGTVISGWCK-----------------------VGRVDEAVK 202

Query: 326 LVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           + ++M   G + P+ V Y A++ G+C  G+LD A     +M   G      +Y   ++ L
Sbjct: 203 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 262

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             +G+  EA E++     +   P+  TY+++++G  +EG + +A ++   M ++G   T 
Sbjct: 263 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 322

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V    LI +L ++G++    K   E + +G   ++V + +LI      G+++ A  ++ +
Sbjct: 323 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 382

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M   +  PD VTY T++  L   GRV+EA +L+ +M  +G+ P +VTY T+I  Y   G 
Sbjct: 383 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 442

Query: 565 VEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           V+D L++  +M++K    T   YN +I+ LC  G  ++A  ++ +++      D ST   
Sbjct: 443 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 502

Query: 623 LVES 626
           L+E 
Sbjct: 503 LIEG 506



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 192/383 (50%), Gaps = 15/383 (3%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVS 376
           G+   A EL+ QM +    P+ VTY  V+ GFC  G +  A  ++++M   G   PN  +
Sbjct: 128 GKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 183

Query: 377 YTAFLNGLCHNGKSLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           Y   ++G C  G+  EA     EM+   E +   P A+ Y+ ++ G   +GKL  A    
Sbjct: 184 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVK---PEAVMYNALIGGYCDQGKLDTALLYR 240

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             MV++G   T    NLL+ +L  +G+   A + ++E   KG A +V  +  LI G C++
Sbjct: 241 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 300

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G++++AL + ++M         VTYT +I ALSK G+V+E  +L  + + +G+ P +V Y
Sbjct: 301 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 360

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLR 610
             +I+ +   G ++   +++ +M  K+       YN ++  LC  G ++EA K++ ++  
Sbjct: 361 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE 420

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
              + D  T + L+  Y  KG    A ++   M N+   P L     + + L   G+ ++
Sbjct: 421 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 480

Query: 671 ADTLMLRFVERGHIQPKSEEHLQ 693
           A+ ++   VE G I P    ++ 
Sbjct: 481 AENMVKEMVENG-ITPDDSTYIS 502



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 153/312 (49%), Gaps = 15/312 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A +V   M  +G E +PEA  Y  L+  Y   GKL  A+     M +  VA  +   N  
Sbjct: 200 AVKVFDEMLTKG-EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 258

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +H L +  +  +A   +E M   G+ P+V TYN LI G+C    +K A+++ + M  +G 
Sbjct: 259 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 318

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
               V+Y  ++  L K+ +++E   L ++ V               N     G I+ A E
Sbjct: 319 RATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE 378

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++ +M +    PD VTY  ++ G C +G +D+A+K++ +M   G +P+ V+Y   ++G  
Sbjct: 379 IMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYS 438

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   +A  + N    + + P  +TY+ ++ GL + G+  +A ++V+EMV+ G  P   
Sbjct: 439 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 498

Query: 446 EINLLIQSLCRE 457
               LI+ L  E
Sbjct: 499 TYISLIEGLTTE 510



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 25/247 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++    K    + A  +   M+RRG+      ++ L+ A S+ G+++    + 
Sbjct: 286 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 345

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
               +  + P+L++ N  I+       + +A   +  M+   I P+ +TYN L++G C L
Sbjct: 346 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 405

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
            R+ +A KLIDEM  +G  PD V+Y T++ GY  K                        G
Sbjct: 406 GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMK------------------------G 441

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
            +++A  + N+M   G  P ++TY A++ G C+ G+ D A+ M+++M  +G  P+  +Y 
Sbjct: 442 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 501

Query: 379 AFLNGLC 385
           + + GL 
Sbjct: 502 SLIEGLT 508



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 28/235 (11%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           + + + AL+ F    R+   R   + Y  ++  LSK    Q   ++     RRGI  RP+
Sbjct: 300 EGNVKKALEIFENMSRRG-VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI--RPD 356

Query: 178 AFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
              Y  L+ ++S +G +  A  ++  M+K  +AP+ +  NT +  L +  ++ +A + ++
Sbjct: 357 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 416

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            M   GI P+++TYN LI GY     +KDA+++ +EM  KG +P  ++Y  ++  LCK  
Sbjct: 417 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK-- 474

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
                                 G+ ++A+ +V +M + G  PD  TY +++ G  
Sbjct: 475 ---------------------NGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 508



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 72/157 (45%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D ++Y  ++   S +     A  ++  M ++ I      ++ LM      G++  A  
Sbjct: 354 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 413

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           ++  M +  + P+L+  NT I    +   +  ALR    M   G  P +LTYN LI+G C
Sbjct: 414 LIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 473

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
              +  DA  ++ EM   G +PD  +Y +++  L  E
Sbjct: 474 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 199/393 (50%), Gaps = 20/393 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM- 237
           F+ ++     AGK   A+ +L  M +    PN +  NT I       ++  AL  +  M 
Sbjct: 486 FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 541

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG-CSPDKVSYYTVMGYLCKEKR 296
           +  GI PN  TY  +I G+C + R+ +A+K+ DEM  KG   P+ V Y  ++G  C + +
Sbjct: 542 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 601

Query: 297 IKEVRDLMEKMVNDS-------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           +       ++MV                 LF D GR  EA ELV +M   G  PDV TY 
Sbjct: 602 LDTALLYRDRMVERGVAMTVATYNLLVHALFMD-GRGTEAYELVEEMGGKGLAPDVFTYN 660

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            ++NG C+ G + +A ++ + M   G +   V+YTA +  L   G+  E  ++ + +   
Sbjct: 661 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 720

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+ + Y+ +++     G +  A +++ EM KK   P  V  N L++ LC  G++D A
Sbjct: 721 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 780

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           +K + E   +G   ++V + +LI G+  KGD+++AL + ++M     +P  +TY  +I  
Sbjct: 781 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 840

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           L KNG+ ++A  ++ +M+  G+ P   TY ++I
Sbjct: 841 LCKNGQGDDAENMVKEMVENGITPDDSTYISLI 873



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 216/424 (50%), Gaps = 35/424 (8%)

Query: 211 LLICNTAIHVLV----VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           L +C T  ++++       K A+AL  L +M      PN +TYN +I G+C   R++ A+
Sbjct: 479 LPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAAL 534

Query: 267 KLIDEMPLKG-CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
            ++ EM  +G  +P++ +Y TV+   CK                        GR++EA +
Sbjct: 535 DIMREMRERGGIAPNQYTYGTVISGWCK-----------------------VGRVDEAVK 571

Query: 326 LVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           + ++M   G + P+ V Y A++ G+C  G+LD A     +M   G      +Y   ++ L
Sbjct: 572 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 631

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             +G+  EA E++     +   P+  TY+++++G  +EG + +A ++   M ++G   T 
Sbjct: 632 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 691

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V    LI +L ++G++    K   E + +G   ++V + +LI      G+++ A  ++ +
Sbjct: 692 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 751

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M   +  PD VTY T++  L   GRV+EA +L+ +M  +G+ P +VTY T+I  Y   G 
Sbjct: 752 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 811

Query: 565 VEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           V+D L++  +M++K    T   YN +I+ LC  G  ++A  ++ +++      D ST   
Sbjct: 812 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 871

Query: 623 LVES 626
           L+E 
Sbjct: 872 LIEG 875



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 192/383 (50%), Gaps = 15/383 (3%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVS 376
           G+   A EL+ QM +    P+ VTY  V+ GFC  G +  A  ++++M   G   PN  +
Sbjct: 497 GKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 552

Query: 377 YTAFLNGLCHNGKSLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           Y   ++G C  G+  EA     EM+   E +   P A+ Y+ ++ G   +GKL  A    
Sbjct: 553 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVK---PEAVMYNALIGGYCDQGKLDTALLYR 609

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             MV++G   T    NLL+ +L  +G+   A + ++E   KG A +V  +  LI G C++
Sbjct: 610 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 669

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G++++AL + ++M         VTYT +I ALSK G+V+E  +L  + + +G+ P +V Y
Sbjct: 670 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 729

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLR 610
             +I+ +   G ++   +++ +M  K+       YN ++  LC  G ++EA K++ ++  
Sbjct: 730 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE 789

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
              + D  T + L+  Y  KG    A ++   M N+   P L     + + L   G+ ++
Sbjct: 790 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 849

Query: 671 ADTLMLRFVERGHIQPKSEEHLQ 693
           A+ ++   VE G I P    ++ 
Sbjct: 850 AENMVKEMVENG-ITPDDSTYIS 871



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 153/312 (49%), Gaps = 15/312 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A +V   M  +G E +PEA  Y  L+  Y   GKL  A+     M +  VA  +   N  
Sbjct: 569 AVKVFDEMLTKG-EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 627

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +H L +  +  +A   +E M   G+ P+V TYN LI G+C    +K A+++ + M  +G 
Sbjct: 628 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 687

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
               V+Y  ++  L K+ +++E   L ++ V               N     G I+ A E
Sbjct: 688 RATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE 747

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++ +M +    PD VTY  ++ G C +G +D+A+K++ +M   G +P+ V+Y   ++G  
Sbjct: 748 IMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYS 807

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   +A  + N    + + P  +TY+ ++ GL + G+  +A ++V+EMV+ G  P   
Sbjct: 808 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 867

Query: 446 EINLLIQSLCRE 457
               LI+ L  E
Sbjct: 868 TYISLIEGLTTE 879



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 25/246 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++    K    + A  +   M+RRG+      ++ L+ A S+ G+++    + 
Sbjct: 655 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 714

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
               +  + P+L++ N  I+       + +A   +  M+   I P+ +TYN L++G C L
Sbjct: 715 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 774

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
            R+ +A KLIDEM  +G  PD V+Y T++ GY  K                        G
Sbjct: 775 GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMK------------------------G 810

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
            +++A  + N+M   G  P ++TY A++ G C+ G+ D A+ M+++M  +G  P+  +Y 
Sbjct: 811 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 870

Query: 379 AFLNGL 384
           + + GL
Sbjct: 871 SLIEGL 876



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 115/234 (49%), Gaps = 28/234 (11%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           + + + AL+ F    R+   R   + Y  ++  LSK    Q   ++     RRGI  RP+
Sbjct: 669 EGNVKKALEIFENMSRRG-VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI--RPD 725

Query: 178 AFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
              Y  L+ ++S +G +  A  ++  M+K  +AP+ +  NT +  L +  ++ +A + ++
Sbjct: 726 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 785

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            M   GI P+++TYN LI GY     +KDA+++ +EM  KG +P  ++Y  ++  LCK  
Sbjct: 786 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK-- 843

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
                                 G+ ++A+ +V +M + G  PD  TY +++ G 
Sbjct: 844 ---------------------NGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 72/157 (45%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D ++Y  ++   S +     A  ++  M ++ I      ++ LM      G++  A  
Sbjct: 723 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 782

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           ++  M +  + P+L+  NT I    +   +  ALR    M   G  P +LTYN LI+G C
Sbjct: 783 LIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 842

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
              +  DA  ++ EM   G +PD  +Y +++  L  E
Sbjct: 843 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 879


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 231/456 (50%), Gaps = 16/456 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A RV  LM  RG  C   AF+Y  L+     AG +R AM V   M+  + AP+  +  T 
Sbjct: 126 ACRVFVLMPLRG--CLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATM 183

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +H L    +  +A   LE     G  PN++ YN LI GYC+   ++ A+K+ + M    C
Sbjct: 184 VHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRC 243

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNLFH---------DQGRIEEAKE 325
           SP+  +Y  ++  LCK  +++    L  +MV    + N+           ++G ++ A  
Sbjct: 244 SPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFR 303

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L++ M   G +P+  T++ +++  C+  ++++A+  L  +   G K N V YT+ ++GLC
Sbjct: 304 LLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLC 363

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             GK   A E++     E + P+A +YS ++ GL R+ KLS+A  ++ +M++KG   +PV
Sbjct: 364 KTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPV 423

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
              ++I  L RE   +G KK   + +  G   ++V +T  +R +C++G +E+A S++  M
Sbjct: 424 TYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQM 483

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P+ VTY T+I   +  G V +A      M+ KG  P   +Y  ++    +    
Sbjct: 484 VDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSS 543

Query: 566 EDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEA 601
           ++ + + +    K    + Y++++  +  +G L++ 
Sbjct: 544 DNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKG 579



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 215/437 (49%), Gaps = 14/437 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ L+ AY  AG +  A   L+ +  A +AP+     + +        L  A R    M 
Sbjct: 75  YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP 134

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
           L G      TY  L+ G      +++A+ +   M    C+PD   Y T++  LC+  R +
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTE 194

Query: 299 EVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           E   L+E+ +++             + + + G +E A ++   M    C P+V TYT ++
Sbjct: 195 EAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELI 254

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C+ G++++A  +  +M   G +PN V+YTA + G C+ G    A  +++  E     
Sbjct: 255 HGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLV 314

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN  T+SV++  L +  K+ EA   +  +VKKG     V    LI  LC+ GK+D A + 
Sbjct: 315 PNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADEL 374

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           MQ+ +++G   +  +++SLI G C++  L +A  +L+DM         VTYT IID L +
Sbjct: 375 MQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVR 434

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTA 584
               E   ++  KM++ G+ P +VTY   +  YC+ GR+ED   ++ +M+ +        
Sbjct: 435 EVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVT 494

Query: 585 YNQVIENLCSFGYLEEA 601
           YN +I    + G + +A
Sbjct: 495 YNTLIRGYANLGLVSQA 511



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 218/458 (47%), Gaps = 14/458 (3%)

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
           A NL    T I+   +   +  A + L  +  AG+ P+   Y   + GYC    +  A +
Sbjct: 69  ARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACR 128

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------NLFH--- 315
           +   MPL+GC     +Y  ++  L     ++E   +   M  DS          + H   
Sbjct: 129 VFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLC 188

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
           + GR EEA+ L+ +    G  P++V Y A+++G+C  GE++ A K+ + M  + C PN  
Sbjct: 189 EAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVR 248

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +YT  ++GLC +GK   A  + +   E    PN +TY+ ++ G   EG L  A  ++  M
Sbjct: 249 TYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLM 308

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              G  P     ++LI +LC+  K++ A+ F+   + KG  VN V +TSLI G C+ G +
Sbjct: 309 ETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKI 368

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           + A  L+  M      PD  +Y+++ID L +  ++ +AT ++  M+ KG+  + VTY  +
Sbjct: 369 DAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTII 428

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I    +    E   K+ +KM++         Y   + + C  G +E+A  ++ +++    
Sbjct: 429 IDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGV 488

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
             +  T + L+  Y N G+   A+     M  +   P+
Sbjct: 489 FPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPN 526



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 198/409 (48%), Gaps = 28/409 (6%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G E     ++ L+  Y  AG++ +A+ V   M     +PN+      IH L    K+ +A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           +    RM  AG+ PNV+TY  LI+G C+   ++ A +L+  M   G  P+  ++  ++  
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           LCK +++                       EEA+  +  + + G   + V YT++++G C
Sbjct: 327 LCKREKV-----------------------EEAQLFLGSLVKKGVKVNEVVYTSLIDGLC 363

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           + G++D A +++Q+M   G  P+  SY++ ++GLC   K  +A  M+    E+    + +
Sbjct: 364 KTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPV 423

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY++++  L RE        +  +M+  G  P  V   + ++S C EG+M+ A+  + + 
Sbjct: 424 TYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQM 483

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           +++G   N+V + +LIRG+   G + +A S  + M      P+  +YT ++  + K    
Sbjct: 484 VDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSS 543

Query: 531 EEATELM----MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           + + ++     MK L +     +V ++ +I+   Q G V +   LL  M
Sbjct: 544 DNSVDIWKIADMKDLQESNYDEIV-WKILIYGLLQKGSVAEFSSLLSVM 591



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 164/344 (47%), Gaps = 2/344 (0%)

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TYT ++N +C  G++  AK+ L  + H G  P++ +YT+F+ G C  G    A  +    
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
                   A TY+ ++HGL   G + EA  V   M      P       ++  LC  G+ 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           + A+  ++E ++ G   N+V + +LI G+C  G++E AL + + M   +  P+  TYT +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           I  L K+G+VE A  L  +M+  GL P VVTY  +I   C  G ++   +LL  M +   
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 581 CRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
                 ++ +I+ LC    +EEA   LG +++   K +      L++     G    A +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +  +M +   +PD      + + L  + K  +A  ++   +E+G
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 8/239 (3%)

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +N L+ +L R          M+   ++  A N+  +T+LI  +C  GD+  A   L  + 
Sbjct: 44  LNTLLMALARHRMFPD----MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLL 99

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                PD+  YT+ +    + G +  A  + + M  +G + T  TY  ++H     G V 
Sbjct: 100 HAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVR 159

Query: 567 DLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           + + +   M +   C      Y  ++  LC  G  EEA  +L + +    + +    + L
Sbjct: 160 EAMAVFVGMRA-DSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNAL 218

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++ Y N G    A KV   M      P+++   ++   L   GK E A  L  R VE G
Sbjct: 219 IDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 218/473 (46%), Gaps = 70/473 (14%)

Query: 173 ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           +C+P A SY  L+ A  R GK+  A   ++ M +  + P++   N  I  L    ++++A
Sbjct: 5   DCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRA 64

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           + F E M      P+V+TYN L+ G C   R+  A  L   M   G +P  V+Y T++  
Sbjct: 65  IEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDV 120

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            CK                         + E A  L+  M+   C P V +Y +++NG C
Sbjct: 121 FCK-----------------------MCQFETAYGLLQLMASRKCSPTVYSYCSIINGLC 157

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +  ++DQA ++ ++M   GCKP+ V+Y   ++GLC   +  EA++++    E  + P+ I
Sbjct: 158 KNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKI 217

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC--------------- 455
           T++ ++ GL    ++ EA  + + M K+G  P  V   +L+  LC               
Sbjct: 218 TFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNY 277

Query: 456 ------------------REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
                             R    D A + +Q+   +G A NVV +T+  +G    GD +E
Sbjct: 278 PACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGL---GDWKE 334

Query: 498 ALSLLDD---MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
            +    +   M     +PD V Y  ++D   K  R++ A +++  M   GL P +VTY T
Sbjct: 335 GMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNT 394

Query: 555 VIHRYCQVGRVEDLLKLLEKMLS--KQKCRTAYNQVIENLCSFGYLEEAGKIL 605
           ++  +C+ G+VE + +LL  M+S  +Q     ++ ++  L   G ++ A   L
Sbjct: 395 LVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFL 447



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 207/470 (44%), Gaps = 33/470 (7%)

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           PN L     +  L    K+ KA   +  M    + P+V TYN +I   C   RI  AI+ 
Sbjct: 8   PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 67

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVN 328
            + MP     PD V+Y T++G LCK                        GR+ +A  L  
Sbjct: 68  FETMP----EPDVVTYNTLLGGLCK-----------------------NGRVAQACSLFG 100

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            M   G  P  VTYT +++ FC++ + + A  +LQ M    C P   SY + +NGLC N 
Sbjct: 101 SMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNR 160

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K  +A ++    +     P+ +TY+ ++HGL  + +L EA D++  MV+  F P  +   
Sbjct: 161 KVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFT 220

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            LI+ LC   ++  A    Q    +GCA ++V  T L+   C +  L  ALS++ +   C
Sbjct: 221 ALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPAC 280

Query: 509 KKDPDTVT-YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
              P+ V  YT I   L +    + A  L+ KM  +G+ P VVTY               
Sbjct: 281 ---PEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMR 337

Query: 568 LLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
             +   +ML +  +    AYN +++  C    L+ A K++  + ++    +  T + LV 
Sbjct: 338 AYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVG 397

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
            +  KG      ++   M +R   PD+     +   L   G+ + A + +
Sbjct: 398 HHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFL 447



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 192/419 (45%), Gaps = 22/419 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y ++++ L K      A+R+ R +        P+  +Y  L+    + G++  A  
Sbjct: 44  DVFTYNVVIDTLCK------ARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQACS 97

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M+ A + P+ +   T I V     +   A   L+ M     +P V +Y  +I G C
Sbjct: 98  LFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLC 157

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              ++  A +L +EM L GC PD+V+Y T++  LC ++R+ E +DL+  MV +S      
Sbjct: 158 KNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKI 217

Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                        RI+EA  L   M++ GC PD+VT+T +V+  C   +L  A  +++  
Sbjct: 218 TFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRN- 276

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
            +  C    + YT     L        A  ++         PN +TY+    GL    + 
Sbjct: 277 -YPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEG 335

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             A    R M+++G  P  V  N+L+   C+  ++D A+K ++     G   N+V + +L
Sbjct: 336 MRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTL 395

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +   C+KG +E    LL  M    + PD  T++T++  L + G+V+ A   +   +S+G
Sbjct: 396 VGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 122/263 (46%), Gaps = 6/263 (2%)

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           ++   CKPN +SY   +  LC  GK  +A   I     E   P+  TY+VV+  L +  +
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           +S A +    M +    P  V  N L+  LC+ G++  A          G   + V +T+
Sbjct: 61  ISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI  FC+    E A  LL  M   K  P   +Y +II+ L KN +V++A +L  +M   G
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAG 602
             P  VTY T+IH  C   R+ +   LL  M+  S Q  +  +  +IE LC+   ++EA 
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236

Query: 603 KILGKVLRTASKADASTCHVLVE 625
            +   + +     D  T  VLV 
Sbjct: 237 VLFQGMAKQGCAPDLVTHTVLVS 259



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 33/189 (17%)

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID-------- 522
            ++ C  N +++  L++  C+ G +++A S + +M   K  PD  TY  +ID        
Sbjct: 2   FSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRI 61

Query: 523 -----------------------ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
                                   L KNGRV +A  L   M   G+ P+ VTY T+I  +
Sbjct: 62  SRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVF 121

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRTAYN--QVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C++ + E    LL+ M S++   T Y+   +I  LC    +++A ++  ++     K D 
Sbjct: 122 CKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDR 181

Query: 618 STCHVLVES 626
            T + L+  
Sbjct: 182 VTYNTLIHG 190


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 180/344 (52%), Gaps = 12/344 (3%)

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
           E M   G  P++ TYN LI G C    +  A +L++EM +KGC P+ ++Y  ++   CKE
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQG------------RIEEAKELVNQMSQMGCIPDVVTY 342
            R++E R+++++M       +  G            ++++A  +   MS  GC PD+ T+
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
            +++ G C+V + ++A  + Q M   G   NT++Y   ++     G   EA +++N    
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
                + ITY+ ++  L R G + +   +  +M+ KG  P  +  N+LI  LCR G +  
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 242

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A +F+++ +++G   ++V + SLI G C+ G  +EAL+L D + +    PD +TY T+I 
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 302

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
              K G  ++A  L+ + +  G +P  VT+  ++  + + G  E
Sbjct: 303 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 187/358 (52%), Gaps = 25/358 (6%)

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
           GC PD  +Y T++  LCK                       +G +  A+EL+N+M   GC
Sbjct: 9   GCGPDIFTYNTLILGLCK-----------------------KGYLVSARELMNEMQIKGC 45

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            P+V+TYT +++ FC+ G L++A+ +L +M   G   N V Y   ++ LC + K  +A  
Sbjct: 46  EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 105

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           M      +   P+  T++ ++ GL +  K  EA  + ++M+ +G     +  N LI +  
Sbjct: 106 MFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFL 165

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           R G M  A K + + L +GC ++ + +  LI+  C+ G++E+ L+L +DM     +P+ +
Sbjct: 166 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNI 225

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           +   +I+ L + G ++ A E +  M+ +GL P +VTY ++I+  C+ GR ++ L L +K+
Sbjct: 226 SCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL 285

Query: 576 LSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
             +  C  A  YN +I   C  G  ++A  +L + + +    +  T ++LV +++ +G
Sbjct: 286 QVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 172/343 (50%), Gaps = 2/343 (0%)

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            M  +GC PD+ TY  ++ G C+ G L  A++++ +M   GC+PN ++YT  ++  C  G
Sbjct: 4   SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 63

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EAR +++    +    NA+ Y+ ++  L ++ K+ +A ++  +M  KG  P     N
Sbjct: 64  RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFN 123

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            LI  LC+  K + A    Q+ L +G   N + + +LI  F ++G ++EAL L++DM   
Sbjct: 124 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 183

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
               D +TY  +I AL + G +E+   L   M+SKGL P  ++   +I+  C+ G ++  
Sbjct: 184 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHA 243

Query: 569 LKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           L+ L  M+ +        YN +I  LC  G  +EA  +  K+       DA T + L+  
Sbjct: 244 LEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISW 303

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
           +  +G+   A+ +  R  +   IP+      +    I EG  E
Sbjct: 304 HCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 165/339 (48%), Gaps = 14/339 (4%)

Query: 172 IECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           + C P+ F+Y  L++   + G L +A  +++ MQ     PN++     I       +L +
Sbjct: 8   VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 67

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A   L+ M   G+  N + YNCLI   C   +++DA+ +  +M  KGC PD  ++ +++ 
Sbjct: 68  ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 127

Query: 290 YLCKEKRIKEVRDLMEKM---------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIP 337
            LCK  + +E   L + M         +  + L H    +G ++EA +LVN M   GC  
Sbjct: 128 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 187

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D +TY  ++   CR G +++   + + M   G  PN +S    +NGLC  G    A E +
Sbjct: 188 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 247

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
                   TP+ +TY+ +++GL + G+  EA ++  ++  +G  P  +  N LI   C+E
Sbjct: 248 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE 307

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           G  D A   +   ++ G   N V +  L+  F ++GD E
Sbjct: 308 GMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 159/326 (48%), Gaps = 2/326 (0%)

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           M + M   GC P+  +Y   + GLC  G  + ARE++N  + +   PN ITY++++    
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           +EG+L EA +V+ EM  KG     V  N LI +LC++ K+  A     +  +KGC  ++ 
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            F SLI G C+    EEAL L  DM L     +T+TY T+I A  + G ++EA +L+  M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYL 598
           L +G     +TY  +I   C+ G +E  L L E M+SK       + N +I  LC  G +
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           + A + L  ++      D  T + L+      G    A  +  ++    + PD      +
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 300

Query: 659 SERLILEGKSEEADTLMLRFVERGHI 684
                 EG  ++A  L+ R V+ G I
Sbjct: 301 ISWHCKEGMFDDAHLLLSRGVDSGFI 326



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 153/317 (48%), Gaps = 23/317 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I Y ++++   K    + A+ VL  M+ +G+      ++ L+ A  +  K+++A+ +   
Sbjct: 50  ITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGD 109

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M      P++   N+ I  L   NK  +AL   + M L G+  N +TYN LI  +     
Sbjct: 110 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 169

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +++A+KL+++M  +GC  D ++Y  ++  LC+                        G IE
Sbjct: 170 MQEALKLVNDMLFRGCPLDDITYNGLIKALCR-----------------------AGNIE 206

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +   L   M   G  P+ ++   ++NG CR G +  A + L+ M H G  P+ V+Y + +
Sbjct: 207 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLI 266

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           NGLC  G++ EA  + +  + E   P+AITY+ ++    +EG   +A  ++   V  GF 
Sbjct: 267 NGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFI 326

Query: 442 PTPVEINLLIQSLCREG 458
           P  V   +L+ +  +EG
Sbjct: 327 PNEVTWYILVSNFIKEG 343



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 23/215 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + I Y  ++    +    Q A +++  M  RG       ++ L+ A  RAG +   + + 
Sbjct: 153 NTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALF 212

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    + PN + CN  I+ L     +  AL FL  M   G+TP+++TYN LI G C  
Sbjct: 213 EDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKT 272

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R ++A+ L D++ ++G  PD ++Y T++ + CKE                       G 
Sbjct: 273 GRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE-----------------------GM 309

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
            ++A  L+++    G IP+ VT+  +V+ F + G+
Sbjct: 310 FDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 146/603 (24%), Positives = 259/603 (42%), Gaps = 59/603 (9%)

Query: 105 SLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           S+   ++  +L+S +D   A  +F    +   + H       MLEIL + +  +    V 
Sbjct: 95  SVSEEEVMTILKSISDPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVF 154

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
            LM ++ I      +  +  A S  G +  A + L  M +     N    N  IH+L+ G
Sbjct: 155 DLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPG 214

Query: 225 ----------------------------------NKLAKALRFLERMQLAGITPNVLTYN 250
                                                 K +  LE M+  G+ PN+ TY 
Sbjct: 215 FCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYT 274

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
             I+      RI DA  +  EM  +GC PD ++Y  ++  LC                  
Sbjct: 275 ICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCA----------------- 317

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                  G++++AKEL  +M      PD VTY  +++ F +VG+L+  K+   +M   G 
Sbjct: 318 ------AGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGY 371

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            P+ V+YT  +  LC +G    A +M++    +   PN  TY+ ++ GL +  +L EA +
Sbjct: 372 APDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALE 431

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           ++  M   G  PT     L I    + G    A    +    +G   ++    + +    
Sbjct: 432 LLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLA 491

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           + G + EA  + +D++ C   PD+VTY  ++   SK G++++AT+L+ +M+SKG  P V+
Sbjct: 492 ETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVM 551

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKV 608
              ++I+   + GRV+   K+  ++ + +   T   YN ++  L   G + +A ++ G +
Sbjct: 552 IINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSM 611

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
             +    +  T + L++         LA K+ CRM   N  PD+     +   LI EG+ 
Sbjct: 612 TESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRI 671

Query: 669 EEA 671
           + A
Sbjct: 672 DYA 674



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 138/582 (23%), Positives = 259/582 (44%), Gaps = 56/582 (9%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA--YSRAGKLRNAMYVLS 200
            Y  M+  L K +    A  +L  M   G+  +P AFSY++    Y ++G    A+    
Sbjct: 412 TYNTMICGLLKARRLDEALELLENMESLGV--KPTAFSYVLFIDYYGKSGDPAKAIDTFE 469

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M+K  + P++  CN +++ L    ++++A      +   G++P+ +TYN L+K Y    
Sbjct: 470 TMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAG 529

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN--------DSN 312
           +I  A +L+ EM  KGC PD +   +++  L K  R+     +  ++ N          N
Sbjct: 530 QIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYN 589

Query: 313 LF----HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
           +       +G+I +A EL   M++ GC P+ +T+ ++++   +   +D A KM  +M   
Sbjct: 590 ILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMM 649

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
            C P+ ++Y   + GL   G+   A    +   +++ +P+ +T   ++ G+ R G++ +A
Sbjct: 650 NCNPDVLTYNTIIYGLIREGRIDYAFWFFH-QMKKFLSPDYVTLCTLIPGVVRHGRVEDA 708

Query: 429 CDVVREMVKKG-------FFPTPVEINL-----------------------------LIQ 452
             VV E V +        F+   +E  L                             LI+
Sbjct: 709 IKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIK 768

Query: 453 SLCREGK-MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
            LC+  K +D    F +   N G    + ++  L+ G       E+AL L +DM      
Sbjct: 769 VLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTH 828

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P+  TY  ++DA  K+ R+ +  +L  +M S+G  P  +T+  +I    +   +   L L
Sbjct: 829 PNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDL 888

Query: 572 LEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
             +++S     T   Y  +I+ L   G  E+A KI  ++L      ++   ++L+  +  
Sbjct: 889 YYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGK 948

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
            G    A ++  +M    + PDLK    + E L + G+ +EA
Sbjct: 949 SGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEA 990



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 201/425 (47%), Gaps = 21/425 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D I Y ++++ L        AK +   M  R     P+  +Y  LM  + + G L     
Sbjct: 304 DVITYTVLIDALCAAGKLDKAKELYVKM--RASSHSPDRVTYITLMDKFGKVGDLETVKR 361

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
             + M+    AP+++     I  L     + +A   L+ M   GI PN+ TYN +I G  
Sbjct: 362 FWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLL 421

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-------- 309
              R+ +A++L++ M   G  P   SY   + Y  K     +  D  E M          
Sbjct: 422 KARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIA 481

Query: 310 --DSNLF--HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             +++L+   + GRI EA+++ N + + G  PD VTY  ++  + + G++D+A ++L +M
Sbjct: 482 ACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEM 541

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              GC+P+ +   + +N L   G+   A +M    +     P  +TY++++ GL +EGK+
Sbjct: 542 ISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKI 601

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A ++   M + G  P  +  N L+  L +   +D A K         C  +V+ + ++
Sbjct: 602 LKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTI 661

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKK--DPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           I G  ++G ++ A      M   KK   PD VT  T+I  + ++GRVE+A +++M+ + +
Sbjct: 662 IYGLIREGRIDYAFWFFHQM---KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQ 718

Query: 544 GLVPT 548
             + T
Sbjct: 719 ACLQT 723



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 159/339 (46%), Gaps = 12/339 (3%)

Query: 206  AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
             + P L   N  +  L+  N   KAL   E M+ AG  PN  TYN L+  +    RI   
Sbjct: 791  GIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKL 850

Query: 266  IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NL 313
              L  EM  +GC P+ +++  ++  L K   + +  DL  ++++              + 
Sbjct: 851  YDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDG 910

Query: 314  FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                GR E+A ++  +M   GC P+ V Y  ++NGF + GE+D A ++ ++M   G +P+
Sbjct: 911  LLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPD 970

Query: 374  TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
              SYT  +  LC  G+  EA +     +     P+ ++Y+ +++GL +  +L EA  +  
Sbjct: 971  LKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFS 1030

Query: 434  EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            EM  +G  P     N LI  L   GK+D A K  +E    G   +V  + +LIRG    G
Sbjct: 1031 EMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSG 1090

Query: 494  DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            + ++A S+   M +    P+T T+  + +   + G V  
Sbjct: 1091 NKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHN 1129



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 126/554 (22%), Positives = 230/554 (41%), Gaps = 95/554 (17%)

Query: 170  RGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
            + ++  P   +Y  L+    + GK+  A+ +   M ++   PN +  N+ +  L   + +
Sbjct: 577  KNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAV 636

Query: 228  AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
              AL+   RM +    P+VLTYN +I G     RI  A     +M  K  SPD V+  T+
Sbjct: 637  DLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTL 695

Query: 288  MGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELV-----NQ 329
            +  + +  R+++   ++ + V+ + L  +             +  IEEA         N 
Sbjct: 696  IPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNS 755

Query: 330  MSQ-------------------------------MGCIPDVVTYTAVVNGFCRVGELDQA 358
            + Q                               +G  P + +Y  +++G       ++A
Sbjct: 756  VCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKA 815

Query: 359  KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE---EWWTPNAITYSVV 415
             ++ + M   G  PN  +Y   L+    +GKS    ++ +   E       PNAIT++++
Sbjct: 816  LELFEDMKSAGTHPNNFTYNLLLDA---HGKSKRINKLYDLYSEMRSRGCEPNAITHNII 872

Query: 416  MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
            +  L +   L++A D+  E++   F PTP     LI  L + G+ + A K  +E L+ GC
Sbjct: 873  ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGC 932

Query: 476  AVNVVNFTSLIRGF-----------------------------------CQKGDLEEALS 500
              N V +  LI GF                                   C  G ++EA+ 
Sbjct: 933  GPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQ 992

Query: 501  LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
              +++ L   DPDTV+Y  II+ L K+ R++EA  L  +M ++G+ P + TY  +I    
Sbjct: 993  YFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLG 1052

Query: 561  QVGRVEDLLKLLE--KMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
              G+V+  +K+ E  +++  +     YN +I      G  ++A  +  K++      +  
Sbjct: 1053 IAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTE 1112

Query: 619  TCHVLVESYLNKGI 632
            T   L   Y   G+
Sbjct: 1113 TFAQLPNKYPRAGL 1126



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 183/399 (45%), Gaps = 54/399 (13%)

Query: 293 KEKRIKE---VRDLMEKMVNDSNL---------FHDQGRIEEAKELVNQMSQMGCIPDVV 340
           +++RI++   V DLM+K V   NL            +G I  A   + +M+++G I +  
Sbjct: 143 EQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAY 202

Query: 341 TYTAVVN----GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           +Y  +++    GFC     ++A K+ ++M   G KP+  +Y+A +  L   G + +   +
Sbjct: 203 SYNGLIHLLLPGFC-----NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNL 257

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +   +     PN  TY++ +  L R  ++ +A  + +EM  +G  P  +   +LI +LC 
Sbjct: 258 LEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCA 317

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            GK+D AK+   +      + + V + +L+  F + GDLE      ++M +    PD VT
Sbjct: 318 AGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVT 377

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           YT +I+AL K+G V+ A +++  M +KG+ P + TY T+I    +  R+++ L+LLE M 
Sbjct: 378 YTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENME 437

Query: 577 SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
           S     TA++ V+                                  ++ Y   G P  A
Sbjct: 438 SLGVKPTAFSYVL---------------------------------FIDYYGKSGDPAKA 464

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
                 M  R ++P +  C      L   G+  EA+ + 
Sbjct: 465 IDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIF 503



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 32/267 (11%)

Query: 128  FYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVA 185
             Y+      +   P  Y  +++ L K    + A ++   M   G  C P +  Y  L+  
Sbjct: 888  LYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYG--CGPNSVIYNILING 945

Query: 186  YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
            + ++G++  A  +   M K  + P+L      +  L +  ++ +A+++ E ++L G+ P+
Sbjct: 946  FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005

Query: 246  VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
             ++YN +I G     R+ +A+ L  EM  +G SPD  +Y  ++ +L              
Sbjct: 1006 TVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHL-------------- 1051

Query: 306  KMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                        G+++ A ++  ++  +G  P V TY A++ G    G  DQA  + ++M
Sbjct: 1052 ---------GIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102

Query: 366  YHHGCKPNTVSYTAFLN-----GLCHN 387
               GC PNT ++    N     GL HN
Sbjct: 1103 MVVGCSPNTETFAQLPNKYPRAGLVHN 1129


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 233/511 (45%), Gaps = 52/511 (10%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P+ ++Y  L+ AY   G+  +A+  L +M K    P+L+  +T I        + +A 
Sbjct: 309 CEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEAR 368

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG-- 289
           +  E +Q  G++PNV  YN L+ GY     +  A  L +EM  KG +PD  ++  ++   
Sbjct: 369 KIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGN 428

Query: 290 --YLCKEKRIKEVRDL-MEKMVNDSNLFHDQ-------GRIEEAKELVNQMSQMGCIPDV 339
             Y  +    +  RD  +  +V D +L+          G+++EA + +  M + G  P V
Sbjct: 429 YKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSV 488

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI-- 397
           V + +V+  + R G  D A K  + M   G  P++ + ++ L GL   G+  EAR+++  
Sbjct: 489 VAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYK 548

Query: 398 --------------------------NTSEEEWW-------TPNAITYSVVMHGLRREGK 424
                                       +   W+        P+AI +S  + GL + G 
Sbjct: 549 MIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGL 608

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + EA +   EM KKGF P     N LI  LC  GK+  A K  +E   KG   ++     
Sbjct: 609 VEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNI 668

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +I GFC++G ++ A     +M+     PDTVTY T+I    K   +  A E + KM + G
Sbjct: 669 IINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASG 728

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAG 602
             P + TY   I  +C   ++   + +L+++++         YN ++  +C+   L+ A 
Sbjct: 729 WDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCT-DMLDRAM 787

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIP 633
            +  K+L+ A   +  T +VL+  +  +G+P
Sbjct: 788 VLTAKLLKMAFVPNVVTTNVLLSHFCKQGMP 818



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 230/506 (45%), Gaps = 57/506 (11%)

Query: 160 AKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A   L LM + G  C+P    FS ++ A+   G +  A  +   +Q+  ++PN+ + NT 
Sbjct: 332 ALGFLHLMIKNG--CKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTL 389

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +        + +A    E M+  GI P+  T+N L+ G     +  D+ +L  +  L   
Sbjct: 390 MSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSL 449

Query: 278 SPDKVSYYTVMGYLCKEKRIKE----VRDLMEKMVNDSNL-------------FHD---- 316
            PD   Y   +  LC   ++ E    + D++EK +  S +             F D    
Sbjct: 450 VPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHK 509

Query: 317 --------------------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
                                     +GR++EA++L+ +M   G   + V +T +++G+ 
Sbjct: 510 AYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYF 569

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +VG+   A  +  +M   G  P+ ++++AF++GL   G   EA E  +   ++ + PN  
Sbjct: 570 KVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNF 629

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            Y+ ++HGL   GKL EA  + REM +KG  P     N++I   C+EG+M  A     E 
Sbjct: 630 VYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEM 689

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
            + G   + V + +LI G+C+  D+  A   L+ MY    DPD  TY   I     + ++
Sbjct: 690 HHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKI 749

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQ--VGRVEDLLKLLEKMLSKQKCRTAYNQV 588
             A  ++ ++++ G+VP  VTY T+++  C   + R   L   L KM       T  N +
Sbjct: 750 SRAVTMLDELIAVGVVPNTVTYNTMMNAVCTDMLDRAMVLTAKLLKMAFVPNVVTT-NVL 808

Query: 589 IENLCSFGYLEEA---GKILGKVLRT 611
           + + C  G  E+A   G+ L K+LR 
Sbjct: 809 LSHFCKQGMPEKALIWGQKLNKLLRA 834



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/505 (22%), Positives = 220/505 (43%), Gaps = 28/505 (5%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           LM  +  +     ++ +LS M++  V P+    +    +L+         + L  M   G
Sbjct: 214 LMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDG 273

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             P    +N +I  +C    ++ A  L+  MP   C PD  +Y  ++             
Sbjct: 274 PRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILI------------- 320

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                     N +  +GR  +A   ++ M + GC P ++T++ ++  FC  G + +A+K+
Sbjct: 321 ----------NAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKI 370

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
            + +   G  PN   Y   ++G        +A  +     ++   P+  T+++++ G  +
Sbjct: 371 FEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYK 430

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            GK +++ ++ R+       P     ++ +  LC  G++D A +F+++ L KG   +VV 
Sbjct: 431 YGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVA 490

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           F S+I  + + G  + A      M +    P + T ++++  LSK GR++EA +L+ KM+
Sbjct: 491 FNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMI 550

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLE 599
            KGL    V +  ++  Y +VG       L  +M ++  C    A++  I+ L   G +E
Sbjct: 551 DKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVE 610

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           EA +   ++ +     +    + L+    N G    A K+   M  + L+PD+     + 
Sbjct: 611 EAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIII 670

Query: 660 ERLILEGKSEEADTLMLRFVERGHI 684
                EG+ + A      F E  HI
Sbjct: 671 NGFCKEGRMKSAFD---AFAEMHHI 692



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 147/327 (44%), Gaps = 25/327 (7%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           ML  LSK    Q A+ +L  M  +G+     AF+ L+  Y + G    A  +   M+   
Sbjct: 529 MLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARG 588

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           + P+ +  +  I  L     + +A      M   G  PN   YN LI G C+  ++ +A+
Sbjct: 589 ICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEAL 648

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKEL 326
           KL  EM  KG  PD  +   ++   CKE                       GR++ A + 
Sbjct: 649 KLEREMRQKGLLPDIFTTNIIINGFCKE-----------------------GRMKSAFDA 685

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
             +M  +G  PD VTY  ++ G+C+V ++  A + L +MY  G  P+  +Y   + G C 
Sbjct: 686 FAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCS 745

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
           + K   A  M++        PN +TY+ +M+ +  +  L  A  +  +++K  F P  V 
Sbjct: 746 SQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPNVVT 804

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNK 473
            N+L+   C++G  + A  + Q+ LNK
Sbjct: 805 TNVLLSHFCKQGMPEKALIWGQK-LNK 830



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 135/286 (47%), Gaps = 28/286 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + + ++L+   K     GA  +   M  RGI     AFS  +   S+AG +  A    
Sbjct: 557 NKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAF 616

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S M K    PN  + N+ IH L    KL +AL+    M+  G+ P++ T N +I G+C  
Sbjct: 617 SEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKE 676

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R+K A     EM   G +PD V+Y T++G  CK      V D++               
Sbjct: 677 GRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCK------VLDMV--------------- 715

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
              A E +N+M   G  PD+ TY   + GFC   ++ +A  ML ++   G  PNTV+Y  
Sbjct: 716 --SADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNT 773

Query: 380 FLNGLCHNGKSLEAREMINTSE--EEWWTPNAITYSVVMHGLRREG 423
            +N +C +   +  R M+ T++  +  + PN +T +V++    ++G
Sbjct: 774 MMNAVCTD---MLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQG 816



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 119/275 (43%), Gaps = 8/275 (2%)

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           + +M G        E+ +++  M + G  P+   I++L + L R G      K ++  + 
Sbjct: 212 NTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIR 271

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            G      NF  +I  FCQKG L  A SLL  M     +PD   Y  +I+A    GR  +
Sbjct: 272 DGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSD 331

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENL 592
           A   +  M+  G  P+++T+ T+I  +C  G V +  K+ E +   Q+   + N  + N 
Sbjct: 332 ALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGI---QEVGLSPNVAMYNT 388

Query: 593 CSFGYLE-----EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
              GY +     +A  +  ++       D +T ++LV      G    +Y++       +
Sbjct: 389 LMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSS 448

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L+PD  L       L   G+ +EA   +   +E+G
Sbjct: 449 LVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKG 483



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/371 (20%), Positives = 145/371 (39%), Gaps = 40/371 (10%)

Query: 351 RVGELDQAKKMLQQMY--HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
           R+G   ++  +++ M+  HH  + +       + G  ++  + E+ E+++   E    P+
Sbjct: 184 RIGA-SRSAHLVEFMWANHHKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPS 242

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
           +   S++   L R G       ++R M++ G  P     N++I   C++G +  A+  + 
Sbjct: 243 SSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLF 302

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
                 C  +V  +  LI  +  +G   +AL  L  M      P  +T++TII A    G
Sbjct: 303 VMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEG 362

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR------ 582
            V EA ++   +   GL P V  Y T++  Y +   V     L E+M  K          
Sbjct: 363 NVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFN 422

Query: 583 -------------------------------TAYNQVIENLCSFGYLEEAGKILGKVLRT 611
                                          + Y+  +  LC  G L+EA + L  +L  
Sbjct: 423 ILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEK 482

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
                    + ++ +Y   G    A+K    M    L+P    C  +   L  +G+ +EA
Sbjct: 483 GMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEA 542

Query: 672 DTLMLRFVERG 682
             L+ + +++G
Sbjct: 543 RDLLYKMIDKG 553


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 199/393 (50%), Gaps = 20/393 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM- 237
           F+ ++     AGK   A+ +L  M +    PN +  NT I       ++  AL  +  M 
Sbjct: 491 FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 546

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG-CSPDKVSYYTVMGYLCKEKR 296
           +  GI PN  TY  +I G+C + R+ +A+K+ DEM  KG   P+ V Y  ++G  C + +
Sbjct: 547 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 606

Query: 297 IKEVRDLMEKMVNDS-------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           +       ++MV                 LF D GR  EA ELV +M   G  PDV TY 
Sbjct: 607 LDTALLYRDRMVERGVAMTVATYNLLVHALFMD-GRGTEAYELVEEMGGKGLAPDVFTYN 665

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            ++NG C+ G + +A ++ + M   G +   V+YTA +  L   G+  E  ++ + +   
Sbjct: 666 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 725

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+ + Y+ +++     G +  A +++ EM KK   P  V  N L++ LC  G++D A
Sbjct: 726 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 785

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           +K + E   +G   ++V + +LI G+  KGD+++AL + ++M     +P  +TY  +I  
Sbjct: 786 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 845

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           L KNG+ ++A  ++ +M+  G+ P   TY ++I
Sbjct: 846 LCKNGQGDDAENMVKEMVENGITPDDSTYISLI 878



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 216/424 (50%), Gaps = 35/424 (8%)

Query: 211 LLICNTAIHVLV----VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           L +C T  ++++       K A+AL  L +M      PN +TYN +I G+C   R++ A+
Sbjct: 484 LPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAAL 539

Query: 267 KLIDEMPLKG-CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
            ++ EM  +G  +P++ +Y TV+   CK                        GR++EA +
Sbjct: 540 DIMREMRERGGIAPNQYTYGTVISGWCK-----------------------VGRVDEAVK 576

Query: 326 LVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           + ++M   G + P+ V Y A++ G+C  G+LD A     +M   G      +Y   ++ L
Sbjct: 577 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 636

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             +G+  EA E++     +   P+  TY+++++G  +EG + +A ++   M ++G   T 
Sbjct: 637 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 696

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V    LI +L ++G++    K   E + +G   ++V + +LI      G+++ A  ++ +
Sbjct: 697 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 756

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M   +  PD VTY T++  L   GRV+EA +L+ +M  +G+ P +VTY T+I  Y   G 
Sbjct: 757 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 816

Query: 565 VEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           V+D L++  +M++K    T   YN +I+ LC  G  ++A  ++ +++      D ST   
Sbjct: 817 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 876

Query: 623 LVES 626
           L+E 
Sbjct: 877 LIEG 880



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 192/383 (50%), Gaps = 15/383 (3%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVS 376
           G+   A EL+ QM +    P+ VTY  V+ GFC  G +  A  ++++M   G   PN  +
Sbjct: 502 GKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 557

Query: 377 YTAFLNGLCHNGKSLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           Y   ++G C  G+  EA     EM+   E +   P A+ Y+ ++ G   +GKL  A    
Sbjct: 558 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVK---PEAVMYNALIGGYCDQGKLDTALLYR 614

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             MV++G   T    NLL+ +L  +G+   A + ++E   KG A +V  +  LI G C++
Sbjct: 615 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 674

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G++++AL + ++M         VTYT +I ALSK G+V+E  +L  + + +G+ P +V Y
Sbjct: 675 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 734

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLR 610
             +I+ +   G ++   +++ +M  K+       YN ++  LC  G ++EA K++ ++  
Sbjct: 735 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE 794

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
              + D  T + L+  Y  KG    A ++   M N+   P L     + + L   G+ ++
Sbjct: 795 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 854

Query: 671 ADTLMLRFVERGHIQPKSEEHLQ 693
           A+ ++   VE G I P    ++ 
Sbjct: 855 AENMVKEMVENG-ITPDDSTYIS 876



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 153/312 (49%), Gaps = 15/312 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A +V   M  +G E +PEA  Y  L+  Y   GKL  A+     M +  VA  +   N  
Sbjct: 574 AVKVFDEMLTKG-EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 632

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +H L +  +  +A   +E M   G+ P+V TYN LI G+C    +K A+++ + M  +G 
Sbjct: 633 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 692

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
               V+Y  ++  L K+ +++E   L ++ V               N     G I+ A E
Sbjct: 693 RATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE 752

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++ +M +    PD VTY  ++ G C +G +D+A+K++ +M   G +P+ V+Y   ++G  
Sbjct: 753 IMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYS 812

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   +A  + N    + + P  +TY+ ++ GL + G+  +A ++V+EMV+ G  P   
Sbjct: 813 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 872

Query: 446 EINLLIQSLCRE 457
               LI+ L  E
Sbjct: 873 TYISLIEGLTTE 884



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 120/246 (48%), Gaps = 25/246 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++    K    + A  +   M+RRG+      ++ L+ A S+ G+++    + 
Sbjct: 660 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 719

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
               +  + P+L++ N  I+       + +A   +  M+   I P+ +TYN L++G C L
Sbjct: 720 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 779

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
            R+ +A KLIDEM  +G  PD V+Y T++ GY  K                        G
Sbjct: 780 GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMK------------------------G 815

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
            +++A  + N+M   G  P ++TY A++ G C+ G+ D A+ M+++M  +G  P+  +Y 
Sbjct: 816 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 875

Query: 379 AFLNGL 384
           + + GL
Sbjct: 876 SLIEGL 881



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 115/234 (49%), Gaps = 28/234 (11%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           + + + AL+ F    R+   R   + Y  ++  LSK    Q   ++     RRGI  RP+
Sbjct: 674 EGNVKKALEIFENMSRR-GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI--RPD 730

Query: 178 AFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
              Y  L+ ++S +G +  A  ++  M+K  +AP+ +  NT +  L +  ++ +A + ++
Sbjct: 731 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 790

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            M   GI P+++TYN LI GY     +KDA+++ +EM  KG +P  ++Y  ++  LCK  
Sbjct: 791 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK-- 848

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
                                 G+ ++A+ +V +M + G  PD  TY +++ G 
Sbjct: 849 ---------------------NGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 72/157 (45%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D ++Y  ++   S +     A  ++  M ++ I      ++ LM      G++  A  
Sbjct: 728 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 787

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           ++  M +  + P+L+  NT I    +   +  ALR    M   G  P +LTYN LI+G C
Sbjct: 788 LIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 847

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
              +  DA  ++ EM   G +PD  +Y +++  L  E
Sbjct: 848 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 884


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 137/543 (25%), Positives = 248/543 (45%), Gaps = 15/543 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  V+  M  +G+      ++ L+  +  +G    A  V   M+   V P+++   T I 
Sbjct: 208 ALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIG 267

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                 ++ +A    E M  +G+ P+V+T + L+ G C   R  +A  L  EM   G +P
Sbjct: 268 EYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAP 327

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
           + V+Y T +  L K +R+ E   L+ +MV+              +    +G+IEEAK+++
Sbjct: 328 NHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVL 387

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
                    P+ VTYT +V+  CR G +D A++ML QM      PN V++++ LNGL   
Sbjct: 388 RHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKR 447

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G   +A   +   ++    PN +TY  ++ G  +      A DV R+M+ +G       +
Sbjct: 448 GCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIV 507

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           + L+  L + G ++ A+   ++   +G  ++ VN+ +L+ G  + G++  AL +  ++  
Sbjct: 508 DSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELME 567

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD V Y   I+ L + G+  EA   + +M + GL P   TY T+I   C+ G    
Sbjct: 568 RNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSK 627

Query: 568 LLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            LKLL +M   S +     Y  ++  L   G +E+A  +L ++          T   +++
Sbjct: 628 ALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQ 687

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ 685
           +      P +  +V   M    L  D+ +   +   L   G + +A  ++   + RG I 
Sbjct: 688 ACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRG-IA 746

Query: 686 PKS 688
           P +
Sbjct: 747 PDT 749



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 153/588 (26%), Positives = 253/588 (43%), Gaps = 62/588 (10%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           Q +   D + Y + L  LS+    + A  VL  M +RG+       S  +V  SR G + 
Sbjct: 110 QPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVG 169

Query: 194 NAMYVLSMMQKAAVAPNLLIC--NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
            A  +  M+ +      L +   N  I        +A AL  +ERM   G++ +V+ YN 
Sbjct: 170 EAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNT 229

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           L+ G+        A ++ + M   G  P  V++ T++G  CK KRI+E   L E MV   
Sbjct: 230 LVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRS- 288

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                                 G +PDVVT +A+V+G CR G   +A  + ++M   G  
Sbjct: 289 ----------------------GVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVA 326

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN V+Y  F++ L    +  E+  ++          + + Y+ VM  L +EGK+ EA DV
Sbjct: 327 PNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDV 386

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           +R  +     P  V   +L+ + CR G +DGA++ + +   K  + NVV F+S++ G  +
Sbjct: 387 LRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVK 446

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIID----------------------------- 522
           +G + +A   +  M      P+ VTY T+ID                             
Sbjct: 447 RGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFI 506

Query: 523 ------ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
                  L KNG +EEA  L   M  +GL+   V Y T++    + G +   LK+ ++++
Sbjct: 507 VDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELM 566

Query: 577 SKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
            +     A  YN  I  LC  G   EA   L ++  T  + D +T + ++ +   +G   
Sbjct: 567 ERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTS 626

Query: 635 LAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            A K+   M   ++ P+L     +   L+  G  E+A  L+      G
Sbjct: 627 KALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAG 674



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/539 (25%), Positives = 248/539 (46%), Gaps = 53/539 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D ++Y  +++ L K    + AK VLR      I      ++ L+ A+ RAG +  A  +L
Sbjct: 363 DLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQML 422

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++ +V+PN++  ++ ++ LV    +AKA  ++ +M+ +GI PNV+TY  LI G+   
Sbjct: 423 LQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKC 482

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VND 310
              + A+ +  +M  +G   +     +++  L K   I+E   L + M         VN 
Sbjct: 483 QGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNY 542

Query: 311 SNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           + L       G +  A ++  ++ +    PD V Y   +N  CR+G+  +AK  L++M +
Sbjct: 543 ATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRN 602

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT--PNAITYSVVMHGLRREGKL 425
            G +P+  +Y   ++  C  G + +A +++N  E +W +  PN ITY+ ++ GL   G +
Sbjct: 603 TGLEPDQATYNTMISAQCREGNTSKALKLLN--EMKWSSIKPNLITYTTLVVGLLEAGVV 660

Query: 426 SEACDVVREMVKKGFFPTPVE-----------------------------------INLL 450
            +A  ++ EM   GF PTP+                                     N L
Sbjct: 661 EKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTL 720

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           +  LC  G    A   + E L +G A + + F +LI G C+   L+ A +    M     
Sbjct: 721 VHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGL 780

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
            P+  T+ T++  L   GR+ EA  ++ +M   GL P  +TY  ++  Y +     + L+
Sbjct: 781 SPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALR 840

Query: 571 LLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           L  +M+SK     A  YN +I +    G + +A ++  ++ R      +ST  +L+  +
Sbjct: 841 LYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGW 899



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 182/411 (44%), Gaps = 14/411 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L KT     A +V + +  R +      ++  +    R GK   A   L
Sbjct: 538 DHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFL 597

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+   + P+    NT I         +KAL+ L  M+ + I PN++TY  L+ G  + 
Sbjct: 598 KEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEA 657

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR----IKEVRDLM--EKMVNDSNL 313
             ++ A  L++EM   G +P  ++Y  V+   C   R    I EV +LM    +  D  +
Sbjct: 658 GVVEKAKYLLNEMASAGFTPTPLTYRRVL-QACSGSRSPYVILEVHELMMGAGLHADITV 716

Query: 314 FHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
           ++         G   +A  ++++M   G  PD +T+ A++ G C+   LD A     QM 
Sbjct: 717 YNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQML 776

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
           H G  PN  ++   L GL   G+  EA  +I   ++    PN +TY +++ G  ++    
Sbjct: 777 HQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKV 836

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA  +  EMV KGF P     N LI    + G M+ AK+   E   +G       +  L+
Sbjct: 837 EALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILL 896

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
            G+ +  +  E   LL DM      P   T +++  A SK G   EA  L+
Sbjct: 897 NGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLL 947



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 229/521 (43%), Gaps = 31/521 (5%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L +A+ RAG+L  A +V+S +      P   +    I  L     +A A RF        
Sbjct: 25  LALAFLRAGRLSAASHVVSSLP---APPPARLLRRLIPALASSGLVAAASRFRP------ 75

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLI--DEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
           +  + LT N +I  YC LH ++ A+ L+     P    + D VSY   +  L ++   + 
Sbjct: 76  VPGDPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRL 135

Query: 300 VRDLMEKM---------VNDSNLF---HDQGRIEEAKELVNQMSQMGCIPD--VVTYTAV 345
              ++ +M         V  S         G + EA  L   + +   I    VV + A+
Sbjct: 136 APPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNAL 195

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G+C+V ++  A  ++++M   G   + V Y   + G  ++G +  A E+    + +  
Sbjct: 196 IDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGV 255

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+ +T++ ++    +  ++ EA  +   MV+ G  P  V ++ L+  LCR+G+   A  
Sbjct: 256 EPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYA 315

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             +E    G A N V + + I    +   + E+L LL +M       D V YTT++D L 
Sbjct: 316 LFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLG 375

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED----LLKLLEKMLSKQKC 581
           K G++EEA +++   LS  + P  VTY  ++  +C+ G ++     LL++ EK +S    
Sbjct: 376 KEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNV- 434

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              ++ ++  L   G + +A   + K+  +    +  T   L++ +        A  V  
Sbjct: 435 -VTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYR 493

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            M +  +  +  +   +   L   G  EEA+ L     ERG
Sbjct: 494 DMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERG 534



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/417 (23%), Positives = 186/417 (44%), Gaps = 25/417 (5%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+ + + M  RG+      ++ LM    + G +  A+ V   + +  ++P+ ++ N  I+
Sbjct: 523 AEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFIN 582

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    K ++A  FL+ M+  G+ P+  TYN +I   C       A+KL++EM      P
Sbjct: 583 CLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKP 642

Query: 280 DKVSYYT-VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPD 338
           + ++Y T V+G L                        + G +E+AK L+N+M+  G  P 
Sbjct: 643 NLITYTTLVVGLL------------------------EAGVVEKAKYLLNEMASAGFTPT 678

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            +TY  V+             ++ + M   G   +   Y   ++ LC +G + +A  +++
Sbjct: 679 PLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLD 738

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                   P+ IT++ ++ G  +   L  A     +M+ +G  P     N L+  L   G
Sbjct: 739 EMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAG 798

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           ++  A   + E    G   N + +  L+ G+ +K +  EAL L  +M      P   TY 
Sbjct: 799 RIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYN 858

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           ++I   +K G + +A EL  +M  +G++ T  TY  +++ + ++    ++  LL+ M
Sbjct: 859 SLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDM 915



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 178/400 (44%), Gaps = 26/400 (6%)

Query: 57  RVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQ------ 110
           +V +E + R +  +    +  +  +CRL +   A S     E+RN    L+P Q      
Sbjct: 560 KVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKS--FLKEMRN--TGLEPDQATYNTM 615

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEI-LSKTKLCQGAKRVLRLMAR 169
           I A  R + +   AL+     + +W      ++ Y  L + L +  + + AK +L  MA 
Sbjct: 616 ISAQCR-EGNTSKALKLLN--EMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMAS 672

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
            G    P  +  ++ A S +      + V  +M  A +  ++ + NT +HVL       K
Sbjct: 673 AGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRK 732

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A   L+ M   GI P+ +T+N LI G+C    + +A     +M  +G SP+  ++ T++G
Sbjct: 733 ATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLG 792

Query: 290 YLCKEKRIKEVRDL---MEKM-VNDSNLFHD--------QGRIEEAKELVNQMSQMGCIP 337
            L    RI E   +   M+KM +  +NL +D        +    EA  L  +M   G IP
Sbjct: 793 GLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIP 852

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
              TY ++++ F + G ++QAK++  +M   G    + +Y   LNG        E R ++
Sbjct: 853 KASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILL 912

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              +E  + P+  T S +     + G   EA  +++ + K
Sbjct: 913 KDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFK 952


>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 224/466 (48%), Gaps = 27/466 (5%)

Query: 108 PRQIC-----AVLRSQADERVALQFFYWADRQWR--YRHDPIVYYMMLEILSKTKLCQGA 160
           P+QI       +++++ D    L  F  A  ++   +RHD   +  M+  L      + A
Sbjct: 10  PKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPA 69

Query: 161 KRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
           + +L  M +   E   + F  +   Y R  +  +A+ V   M+   V P      T   +
Sbjct: 70  EGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDI 129

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC-DLHRIKDAIKLIDEMPLKGCSP 279
           LV  N + +A+ F + M+  GI P V++ N LIK  C +   ++ A +L  EMP +GC P
Sbjct: 130 LVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQP 189

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFH---DQGRIEEAKELV 327
           D  +Y T++  LCK  +I + ++L+++M         V+ ++L H       ++EA EL+
Sbjct: 190 DSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELL 249

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M   G  P+V TY+++++G C+ G   QA ++L+ M      PN V+Y+  +NGLC  
Sbjct: 250 EEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKE 309

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           GK  EA E+++    +   P+A  Y  ++ GL       EA + + EM   G  P     
Sbjct: 310 GKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASW 369

Query: 448 -------NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
                  N+++Q LC       A +       +G +V +  F  L++ FC++GDL +A  
Sbjct: 370 TFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAAR 429

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           +L++M L    PD   +  ++  L    +V E TEL++  L +  V
Sbjct: 430 ILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAELKQKFV 475



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 188/381 (49%), Gaps = 24/381 (6%)

Query: 218 IHVLVVGNKLAKALRFLERMQLAG--ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
           IH LV  N+   A   LERM+     +T +V    C  +GY  +HR  DAI++  +M   
Sbjct: 57  IHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTIC--RGYGRVHRPLDAIRVFHKMEDF 114

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMVNDS---------NLFHDQGRIEE 322
              P + SY TV   L +E  +K      +++ EK +  +          L  ++  +E 
Sbjct: 115 QVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVES 174

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A  L  +M   GC PD  TY  ++NG C++G++ QAK++L +M   G  P+ VSYT+ ++
Sbjct: 175 AFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIH 234

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC +    EA E++         PN  TYS +M GL + G  S+A +++  MV++   P
Sbjct: 235 GLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLP 294

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V  + LI  LC+EGK   A + +     +G   +   +  +I G C   + +EA + +
Sbjct: 295 NMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFI 354

Query: 503 DDMYLCKKDPDTVTYT-------TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           D+M L    P+  ++T        ++  L  N     A +L + M ++G+   + T+  +
Sbjct: 355 DEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCL 414

Query: 556 IHRYCQVGRVEDLLKLLEKML 576
           +  +C+ G +    ++LE+M+
Sbjct: 415 VKCFCKRGDLNKAARILEEMI 435



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 142/284 (50%), Gaps = 3/284 (1%)

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D  T+ A+++    V +   A+ ML++M    C+     +     G     + L+A  + 
Sbjct: 49  DHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVF 108

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR- 456
           +  E+    P   +Y  V   L  E  +  A    +EM +KG  PT V +N+LI++LC+ 
Sbjct: 109 HKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKN 168

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           E  ++ A +  +E  N+GC  +   + +LI G C+ G + +A  LLD+M      P  V+
Sbjct: 169 EETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVS 228

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           YT++I  L ++  ++EA EL+ +M+  G+ P V TY +++   C+ G     ++LLE M+
Sbjct: 229 YTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMV 288

Query: 577 SKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
            ++       Y+ +I  LC  G   EA +IL ++     K DA 
Sbjct: 289 RRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAG 332



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/319 (21%), Positives = 125/319 (39%), Gaps = 42/319 (13%)

Query: 405 WTPNAITYSVVMHGLRREGKLSEAC---DVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           W P  IT S+V   ++ E  +++     D   E    GF         +I  L    +  
Sbjct: 9   W-PKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFR 67

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A+  ++    + C V    F ++ RG+ +     +A+ +   M   +  P   +Y T+ 
Sbjct: 68  PAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVF 127

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVV------------------------------- 550
           D L +   V+ A     +M  KG+ PTVV                               
Sbjct: 128 DILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGC 187

Query: 551 -----TYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGK 603
                TY T+I+  C++G++    +LL++M  K       +Y  +I  LC    L+EA +
Sbjct: 188 QPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIE 247

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           +L +++    + +  T   L++     G    A ++   M  R L+P++     +   L 
Sbjct: 248 LLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLC 307

Query: 664 LEGKSEEADTLMLRFVERG 682
            EGK  EA  ++ R   +G
Sbjct: 308 KEGKHREAVEILDRMRLQG 326


>gi|359476071|ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 629

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 220/479 (45%), Gaps = 51/479 (10%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQ 203
           +++ +LSK  + + A  V R++  +G  C   A SY  ++ A  + G+   A+ +L  ++
Sbjct: 85  LLISMLSKAGMAREAHFVFRVLLGKG--CLKCAHSYNPILWALCKCGQSYTALALLYSLK 142

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           K     N       ++         +A   L+ M++ G  PNV+TY  ++K  CD  RI 
Sbjct: 143 KMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIG 202

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME-----KMVNDSNLF---- 314
           DA+ ++ +M  +GC PD V+Y  ++  L  + R  E+ +L++     ++  DS  +    
Sbjct: 203 DALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALT 262

Query: 315 -----HDQGRIE---------------------------------EAKELVNQMSQMGCI 336
                 DQ R+                                  EA  L+  M + G +
Sbjct: 263 GGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLV 322

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P  V+Y  ++NGFCR   +D+A ++          P+ VS+   L+  C  G S   R +
Sbjct: 323 PTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRV 382

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +   E E    N ++ + ++      GK+SE  +++  M++ G  PT V  N+L+  LC+
Sbjct: 383 LYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCK 442

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            G +  A +  +E  N G   N  ++  LI    ++G+      LL DMY  +  PD VT
Sbjct: 443 NGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVT 502

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           Y + I  L K G++  A +L  +ML  GL PT+  Y T++    Q G+  D++ LL+ M
Sbjct: 503 YGSFIKGLCKEGKISVAIQLRDQMLESGLTPTITIYNTILAAMFQRGKFWDIVSLLKDM 561



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/530 (24%), Positives = 234/530 (44%), Gaps = 14/530 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R G       F+ L+   +  G LR A +    M ++   P+       +   +    
Sbjct: 1   MKRLGPYPNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGS 60

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L  ++   E M      P   T N LI         ++A  +   +  KGC     SY  
Sbjct: 61  LVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNP 120

Query: 287 VMGYLCKEKRIKEVRDLM---EKMVNDSNL---------FHDQGRIEEAKELVNQMSQMG 334
           ++  LCK  +      L+   +KM    N          F  +G  EEA  ++++M   G
Sbjct: 121 ILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDG 180

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C P+V+TYT +V   C  G +  A  +L +M   GC P+ V+Y   L  L H  + +E  
Sbjct: 181 CKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIG 240

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E++   +++  +P++ TY+ +  GL +  ++  A  ++  ++  G        N+    L
Sbjct: 241 ELLQVIDQKEISPDSFTYAALTGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCL 300

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CRE K   A   +Q  + KG     V++ +++ GFC++  ++EAL L D        PD 
Sbjct: 301 CRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDV 360

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           V++ TI+ A  K G       ++ +M  +G+   VV+   +I  +C +G++ + L+LLE 
Sbjct: 361 VSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLES 420

Query: 575 MLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M+      T   +N +++ LC  G L  A +I  +   T    + ++ ++L+ + + +G 
Sbjct: 421 MIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGN 480

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             L  ++   M++  L PD        + L  EGK   A  L  + +E G
Sbjct: 481 DSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESG 530



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 189/427 (44%), Gaps = 16/427 (3%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA--YSRAGKLRNAM 196
           H+   Y  ++   SK  L + A  +L  M   G  C+P   +Y ++       G++ +A+
Sbjct: 148 HNAASYTALVYGFSKEGLWEEAFCMLDEMKIDG--CKPNVITYTVIVKFLCDEGRIGDAL 205

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M K    P+++  N  +  L   ++  +    L+ +    I+P+  TY  L  G 
Sbjct: 206 DILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGL 265

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
               +++ A KL+  +   GC+ D   Y      LC+E +  E   L++ MV        
Sbjct: 266 LKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTN 325

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  N F  +  I+EA +L +        PDVV++  +++  C+ G     +++L +
Sbjct: 326 VSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYR 385

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M + G K N VS T  +   C  GK  E  E++ +       P  +T+++++  L + G 
Sbjct: 386 MEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGL 445

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L  A  + RE    G+FP     N+LI +  REG     ++ +++  +     + V + S
Sbjct: 446 LGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGS 505

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
            I+G C++G +  A+ L D M      P    Y TI+ A+ + G+  +   L+  M   G
Sbjct: 506 FIKGLCKEGKISVAIQLRDQMLESGLTPTITIYNTILAAMFQRGKFWDIVSLLKDMTMDG 565

Query: 545 LVPTVVT 551
             P  V+
Sbjct: 566 CEPNAVS 572



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 171/374 (45%), Gaps = 27/374 (7%)

Query: 173 ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           E  P++F+Y  L     +  ++R A  +L  +  A    ++ + N   H L   NK  +A
Sbjct: 250 EISPDSFTYAALTGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEA 309

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           L  L+ M   G+ P  ++YN ++ G+C  + I +A++L D       SPD VS+ T++  
Sbjct: 310 LSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSA 369

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            CK                       QG     + ++ +M   G   +VV+ T ++  FC
Sbjct: 370 ACK-----------------------QGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFC 406

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
            +G++ +  ++L+ M  +G  P  V++   L+ LC NG    A  +        + PN  
Sbjct: 407 AIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTT 466

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           +Y++++H   REG  S    ++R+M      P  V     I+ LC+EGK+  A +   + 
Sbjct: 467 SYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQM 526

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK--NG 528
           L  G    +  + +++    Q+G   + +SLL DM +   +P+ V+   +  A+SK    
Sbjct: 527 LESGLTPTITIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEPNAVSIEILKQAMSKCWMK 586

Query: 529 RVEEATELMMKMLS 542
           R  E  EL +  LS
Sbjct: 587 RFPEFIELWVVHLS 600


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 213/433 (49%), Gaps = 20/433 (4%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA--------VAPNLLICNTAI 218
           +   G      ++  L+      G++  A+ +L M++K          V  N+++ +  I
Sbjct: 133 IVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVI 192

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
             L     + +   F   M   G+ PN  TY  LI+G C + +  +   L+DEM  +G  
Sbjct: 193 DCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLD 252

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNL---------FHDQGRIEEAKEL 326
                +  ++  LCK   + E R++ ++MVN   + N+         +  +G ++ A+EL
Sbjct: 253 VSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMAREL 312

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
            + + + G   DV TY   ++G+C+VG +  A ++  +M   G  PN V+Y + ++ LC 
Sbjct: 313 FDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCK 372

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G+   A E++ T      TP+ +T  +++ GL +  +L +A  +  ++V+ G  P    
Sbjct: 373 AGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWS 432

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
             +LI   C   +M  A   +++   K    ++V ++ LI G C+ G +  A  LL++M+
Sbjct: 433 YTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMH 492

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
           +    PDT+TY+ ++DAL K   ++EA  L  +M+ +GL P V+ Y  +I  YC+  R++
Sbjct: 493 VKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERID 552

Query: 567 DLLKLLEKMLSKQ 579
           + + L  +M  K 
Sbjct: 553 EAINLFREMHMKN 565



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 231/492 (46%), Gaps = 28/492 (5%)

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
           +   G +  +  +   + K     + +  NT +  L V   + KAL F + +   G + N
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLI-----------DEMPLKGCSPDKVSYYTVMGYLCKE 294
            ++Y  LI G C+  R+ +A+ L+           D   +KG   + V Y  V+  LC+ 
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKG---NVVMYSIVIDCLCRN 198

Query: 295 KRIKEVRDLMEKMVNDS---NLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTY 342
             + E  +   +M+ +    N F            G+  E   LV++M + G    V  +
Sbjct: 199 GFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVF 258

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           T +++G C+ G L +A++M  +M + G +PN V+ TA + G C  G    ARE+ +   E
Sbjct: 259 TVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGE 318

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
             +  +  TY+V +HG  + G++ +A  V  EM ++G  P  V  N LI  LC+ G++ G
Sbjct: 319 WGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSG 378

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A + ++     G   ++V    L+ G C+   L++A+ L + +      PD  +YT +I 
Sbjct: 379 AWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIH 438

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC- 581
               + R+ EA  L+  M  K LVP +VTY  +I   C+ GR+ +  +LL +M  K    
Sbjct: 439 GCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLP 498

Query: 582 -RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               Y+ +++ L    +L+EA  +  ++++   + D     ++++ Y        A  + 
Sbjct: 499 DTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLF 558

Query: 641 CRMFNRNLIPDL 652
             M  +NL+PD+
Sbjct: 559 REMHMKNLVPDI 570



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 196/397 (49%), Gaps = 12/397 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           +S ++    R G +       + M    V PN     + I  L    K  +    ++ M 
Sbjct: 188 YSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMI 247

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G+  +V  +  LI G C    + +A ++ DEM  +G  P+ V+   +MG  C +  + 
Sbjct: 248 RRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVD 307

Query: 299 EVRDLMEKM--------VNDSNLF-HDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
             R+L + +        V   N+F H     GR+ +A  + ++M + G +P++VTY +++
Sbjct: 308 MARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLI 367

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C+ GE+  A ++++ M+  G  P+ V+    L+GLC + +  +A  + N   E   T
Sbjct: 368 DCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLT 427

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+  +Y++++HG     ++ EA +++R+M  K   P  V  + LI  LCR G++  A + 
Sbjct: 428 PDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRL 487

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           + E   KG   + + ++ L+    +K  L+EA+ L + M     +PD + YT +ID   K
Sbjct: 488 LNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCK 547

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           + R++EA  L  +M  K LVP +VTY  + +   + G
Sbjct: 548 SERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSG 584



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/484 (23%), Positives = 206/484 (42%), Gaps = 64/484 (13%)

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---- 311
           +  L  +  +  +  ++  +G   D V+  TV+  LC    + +  +  +++VN+     
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 312 --------NLFHDQGRIEEAKELV------------------------------------ 327
                   N   + GR+ EA  L+                                    
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 328 -------NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
                  N+M   G  P+  TY +++ G C VG+  +   ++ +M   G   +   +T  
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++GLC NG  +EAREM +      + PN +T + +M G   +G +  A ++   + + GF
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
                  N+ I   C+ G++  A +   E   +G   N+V + SLI   C+ G++  A  
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE 381

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           ++  M+     PD VT   ++D L K+ R+++A  L  +++  GL P V +Y  +IH  C
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCC 441

Query: 561 QVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
              R+ + + LL  M  K        Y+ +I+ LC  G +  A ++L ++       D  
Sbjct: 442 TSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI 501

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG--KSEEADTLML 676
           T  +L+++   K     A  +  +M  R L PD+ +C  +    +++G  KSE  D  + 
Sbjct: 502 TYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDV-MCYTI----MIDGYCKSERIDEAIN 556

Query: 677 RFVE 680
            F E
Sbjct: 557 LFRE 560



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 163/345 (47%), Gaps = 12/345 (3%)

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
           F  +G +  +  +  ++   G   +TV+    L GLC NG  L+A E  +      ++ N
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 409 AITYSVVMHGLRREGKLSEACDVVREM------VKKGFF--PTPVEINLLIQSLCREGKM 460
            ++Y ++++GL   G+++EA +++R +       K GFF     V  +++I  LCR G +
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D   +F  E +  G   N   + SLIRG C  G   E   L+D+M     D     +T +
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE---DLLKLLEKMLS 577
           ID L KNG + EA E+  +M+++G  P +VT   ++  YC  G V+   +L   + +   
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321

Query: 578 KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
           K+   T YN  I   C  G + +A ++  ++ R     +  T + L++     G    A+
Sbjct: 322 KRDVWT-YNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++   M    L PD+  C  + + L    + ++A  L  + VE G
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG 425



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 155/339 (45%), Gaps = 14/339 (4%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
           V+ ++++ L K  +   A+ +   M  RG E      + LM  Y   G +  A  +   +
Sbjct: 257 VFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI 316

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            +     ++   N  IH      ++  A+R  + M   G+ PN++TYN LI   C    +
Sbjct: 317 GEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEV 376

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------ 316
             A +++  M   G +PD V+   ++  LCK KR+ +   L  ++V +S L  D      
Sbjct: 377 SGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLV-ESGLTPDVWSYTI 435

Query: 317 -------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                    R+ EA  L+  M     +P +VTY+ +++G CR G +  A ++L +M+  G
Sbjct: 436 LIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKG 495

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             P+T++Y+  L+ L       EA  + N   +    P+ + Y++++ G  +  ++ EA 
Sbjct: 496 PLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAI 555

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
           ++ REM  K   P  V   +L  ++ + G      KF+ 
Sbjct: 556 NLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVN 594



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 152/331 (45%), Gaps = 26/331 (7%)

Query: 131 ADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
           A  +W ++ D   Y + +    K    + A RV   M R G+      ++ L+    +AG
Sbjct: 315 AIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAG 374

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           ++  A  ++  M ++ + P+++ C   +  L    +L +A+    ++  +G+TP+V +Y 
Sbjct: 375 EVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYT 434

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI G C   R+ +A+ L+ +M LK   P  V+Y  ++  LC+                 
Sbjct: 435 ILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCR----------------- 477

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                  GRI  A  L+N+M   G +PD +TY+ +++   +   LD+A  +  QM   G 
Sbjct: 478 ------SGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGL 531

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P+ + YT  ++G C + +  EA  +      +   P+ +TY+++ + + + G  S    
Sbjct: 532 EPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWK 591

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
            V   V +   P P  +  L  +LC+   +D
Sbjct: 592 FVN--VIRDINPPPRVLKYL-AALCKSEHLD 619


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 199/394 (50%), Gaps = 20/394 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM- 237
           F+ ++     AGK   A+ +L  M +    PN +  NT I       ++  AL  +  M 
Sbjct: 44  FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 99

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG-CSPDKVSYYTVMGYLCKEKR 296
           +  GI PN  TY  +I G+C + R+ +A+K+ DEM  KG   P+ V Y  ++G  C + +
Sbjct: 100 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 159

Query: 297 IKEVRDLMEKMVNDS-------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           +       ++MV                 LF D GR  EA ELV +M   G  PDV TY 
Sbjct: 160 LDTALLYRDRMVERGVAMTVATYNLLVHALFMD-GRGTEAYELVEEMGGKGLAPDVFTYN 218

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            ++NG C+ G + +A ++ + M   G +   V+YT+ +  L   G+  E  ++ + +   
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 278

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+ + Y+ +++     G +  A +++ EM KK   P  V  N L++ LC  G++D A
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 338

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           +K + E   +G   ++V + +LI G+  KGD+++AL + ++M     +P  +TY  +I  
Sbjct: 339 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 398

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           L KNG+ ++A  ++ +M+  G+ P   TY ++I 
Sbjct: 399 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 432



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 216/424 (50%), Gaps = 35/424 (8%)

Query: 211 LLICNTAIHVLV----VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           L +C T  ++++       K A+AL  L +M      PN +TYN +I G+C   R++ A+
Sbjct: 37  LPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAAL 92

Query: 267 KLIDEMPLKG-CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
            ++ EM  +G  +P++ +Y TV+   CK                        GR++EA +
Sbjct: 93  DIMREMRERGGIAPNQYTYGTVISGWCK-----------------------VGRVDEAVK 129

Query: 326 LVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           + ++M   G + P+ V Y A++ G+C  G+LD A     +M   G      +Y   ++ L
Sbjct: 130 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 189

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             +G+  EA E++     +   P+  TY+++++G  +EG + +A ++   M ++G   T 
Sbjct: 190 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 249

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V    LI +L ++G++    K   E + +G   ++V + +LI      G+++ A  ++ +
Sbjct: 250 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 309

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M   +  PD VTY T++  L   GRV+EA +L+ +M  +G+ P +VTY T+I  Y   G 
Sbjct: 310 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGD 369

Query: 565 VEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           V+D L++  +M++K    T   YN +I+ LC  G  ++A  ++ +++      D ST   
Sbjct: 370 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 429

Query: 623 LVES 626
           L+E 
Sbjct: 430 LIEG 433



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 194/383 (50%), Gaps = 15/383 (3%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVS 376
           G+   A EL+ QM +    P+ VTY  V+ GFC  G +  A  ++++M   G   PN  +
Sbjct: 55  GKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 110

Query: 377 YTAFLNGLCHNGKSLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           Y   ++G C  G+  EA     EM+   E +   P A+ Y+ ++ G   +GKL  A    
Sbjct: 111 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVK---PEAVMYNALIGGYCDQGKLDTALLYR 167

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             MV++G   T    NLL+ +L  +G+   A + ++E   KG A +V  +  LI G C++
Sbjct: 168 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 227

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G++++AL + ++M         VTYT++I ALSK G+V+E  +L  + + +G+ P +V Y
Sbjct: 228 GNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 287

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLR 610
             +I+ +   G ++   +++ +M  K+       YN ++  LC  G ++EA K++ ++ +
Sbjct: 288 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTK 347

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
              + D  T + L+  Y  KG    A ++   M N+   P L     + + L   G+ ++
Sbjct: 348 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 407

Query: 671 ADTLMLRFVERGHIQPKSEEHLQ 693
           A+ ++   VE G I P    ++ 
Sbjct: 408 AENMVKEMVENG-ITPDDSTYIS 429



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 154/312 (49%), Gaps = 15/312 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A +V   M  +G E +PEA  Y  L+  Y   GKL  A+     M +  VA  +   N  
Sbjct: 127 AVKVFDEMLTKG-EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 185

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +H L +  +  +A   +E M   G+ P+V TYN LI G+C    +K A+++ + M  +G 
Sbjct: 186 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 245

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
               V+Y +++  L K+ +++E   L ++ V               N     G I+ A E
Sbjct: 246 RATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE 305

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++ +M +    PD VTY  ++ G C +G +D+A+K++ +M   G +P+ V+Y   ++G  
Sbjct: 306 IMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYS 365

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   +A  + N    + + P  +TY+ ++ GL + G+  +A ++V+EMV+ G  P   
Sbjct: 366 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 425

Query: 446 EINLLIQSLCRE 457
               LI+ L  E
Sbjct: 426 TYISLIEGLTTE 437



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 25/247 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++    K    + A  +   M+RRG+      ++ L+ A S+ G+++    + 
Sbjct: 213 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 272

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
               +  + P+L++ N  I+       + +A   +  M+   I P+ +TYN L++G C L
Sbjct: 273 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 332

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
            R+ +A KLIDEM  +G  PD V+Y T++ GY  K                        G
Sbjct: 333 GRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMK------------------------G 368

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
            +++A  + N+M   G  P ++TY A++ G C+ G+ D A+ M+++M  +G  P+  +Y 
Sbjct: 369 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 428

Query: 379 AFLNGLC 385
           + + GL 
Sbjct: 429 SLIEGLT 435



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 28/235 (11%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           + + + AL+ F    R+   R   + Y  ++  LSK    Q   ++     RRGI  RP+
Sbjct: 227 EGNVKKALEIFENMSRRG-VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI--RPD 283

Query: 178 AFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
              Y  L+ ++S +G +  A  ++  M+K  +AP+ +  NT +  L +  ++ +A + ++
Sbjct: 284 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 343

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            M   GI P+++TYN LI GY     +KDA+++ +EM  KG +P  ++Y  ++  LCK  
Sbjct: 344 EMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK-- 401

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
                                 G+ ++A+ +V +M + G  PD  TY +++ G  
Sbjct: 402 ---------------------NGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 435



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 72/157 (45%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D ++Y  ++   S +     A  ++  M ++ I      ++ LM      G++  A  
Sbjct: 281 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 340

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           ++  M K  + P+L+  NT I    +   +  ALR    M   G  P +LTYN LI+G C
Sbjct: 341 LIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 400

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
              +  DA  ++ EM   G +PD  +Y +++  L  E
Sbjct: 401 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 211/437 (48%), Gaps = 14/437 (3%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y +ML+ L K    + A  V   M     +     +  L+    R+G + +A  V S M
Sbjct: 266 TYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDM 325

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            KA +  ++ + N+ I       +  +A +F +    +GI   + TYN + KG  D   +
Sbjct: 326 VKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMV 384

Query: 263 KDAIKLIDEMPLKG-CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
            +A +L+ ++     CSPDKV++ T++  LC+        +++E   N            
Sbjct: 385 SEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSS 444

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
             N F   GR  +A E+   M + GC P+   Y A++NGFCRV +++ A K+  +M  +G
Sbjct: 445 MINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNG 504

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
           C P  ++Y   ++GLC   K  EA  +     E  + P+  TY+ ++ GL R+ K+  A 
Sbjct: 505 CCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVAL 564

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            +  E++  G     +  N+LI  LC  GK+D A     E   K C+ N+V + +L+ GF
Sbjct: 565 RIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGF 624

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
            + G +++A SL   +      PD VTY T I  L    R  E   L+ ++L+ G++PTV
Sbjct: 625 YEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTV 684

Query: 550 VTYRTVIHRYCQVGRVE 566
           +T+  ++    + G ++
Sbjct: 685 ITWSILVRAVIKYGPIQ 701



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 211/453 (46%), Gaps = 17/453 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARR-GIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           D + Y  +L    +T + + A +V   + R  G       +  ++    + G+ + A  V
Sbjct: 227 DAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEV 286

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
            S M       + +     IH L     +  A R    M  AG+  +V  YN LIKG+C+
Sbjct: 287 WSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCE 346

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY-LCKEKRIKEVRDLMEKMVNDSN----- 312
           + R  +A K  D     G    +++ Y +M   L     + E  +L++++ ND++     
Sbjct: 347 VGRTGEAWKFWDSTGFSGIR--QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDK 404

Query: 313 -----LFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                L H   + G    A E++      G   DV +Y++++N FC+ G    A ++ + 
Sbjct: 405 VTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKN 464

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   GCKPN+  Y A +NG C   K  +A ++          P  ITY+ ++ GL +  K
Sbjct: 465 MVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEK 524

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             EA  + +EM+++GF P       LI+ LCR+ K+D A +   E L+ G  V+V+    
Sbjct: 525 YQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNI 584

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G C  G ++EA  +  +M      P+ VTY T++D   + G +++A  L   +L  G
Sbjct: 585 LIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNG 644

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           L P +VTY T I   C   R  + + LL ++L+
Sbjct: 645 LKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLA 677



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/538 (24%), Positives = 240/538 (44%), Gaps = 20/538 (3%)

Query: 109 RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA 168
           R +CA  R   D  V+L   + + R+     D + Y  ++  L+K      A  +L  M 
Sbjct: 166 RSLCA--RGDVDRAVSL---FSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMP 220

Query: 169 RRGIECRPEAFSYLMVAYSRAGKLRNAMYVL-SMMQKAAVAPNLLICNTAIHVLVVGNKL 227
             G++     ++ L+    R G    AM V   +++    +PNL      +  L    + 
Sbjct: 221 NYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRF 280

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
            +A     RM       + +TY  LI G C    +  A ++  +M   G   D   Y ++
Sbjct: 281 KEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSL 340

Query: 288 MGYLCKEKRIKEVRDLME-------KMVNDSNLFH----DQGRIEEAKELVNQM-SQMGC 335
           +   C+  R  E     +       + +   N+      D G + EA EL+ Q+ +   C
Sbjct: 341 IKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASC 400

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            PD VT+  +++G C  G  ++A ++L+   + G + +  SY++ +N  C +G++ +A E
Sbjct: 401 SPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANE 460

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +     ++   PN+  Y+ +++G  R  K+++A  +  EM   G  PT +  N LI  LC
Sbjct: 461 VYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLC 520

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           +  K   A    +E L +G   ++  + SLIRG C+   ++ AL + D++       D +
Sbjct: 521 KAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVM 580

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            +  +I  L   G+V+EA  + ++M  K   P +VTY T++  + ++G ++    L   +
Sbjct: 581 VHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAI 640

Query: 576 LSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           L    +     YN  I+ LCS     E   +L +VL T       T  +LV + +  G
Sbjct: 641 LDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/534 (23%), Positives = 246/534 (46%), Gaps = 25/534 (4%)

Query: 172 IECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAA----VAPNLLICNTAIHVLVVGN 225
           + C P   S+  L+ A+ RA +  +A    + +   A    +APNL   N  +  L    
Sbjct: 113 LGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARG 172

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
            + +A+     ++  G+ P+ +TY+ L+ G     ++ +A+ L+DEMP  G   D V Y 
Sbjct: 173 DVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYN 232

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQ 332
            ++    +    ++   + E++V D     +              GR +EA E+ ++M  
Sbjct: 233 ALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMA 292

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
                D VTY  +++G CR G++D A ++   M   G   +   Y + + G C  G++ E
Sbjct: 293 NNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGE 352

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF-FPTPVEINLLI 451
           A +  +++          TY+++  GL   G +SEA ++++++       P  V    LI
Sbjct: 353 AWKFWDSTGFS-GIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLI 411

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LC  G  + A + +++  N G  ++V +++S+I  FC+ G   +A  +  +M      
Sbjct: 412 HGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCK 471

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P++  Y  +I+   +  ++ +A ++ ++M S G  PT++TY T+I   C+  + ++   L
Sbjct: 472 PNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSL 531

Query: 572 LEKMLS---KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
            ++ML    K   RT Y  +I  LC    ++ A +I  ++L    + D    ++L+    
Sbjct: 532 TKEMLERGFKPDIRT-YASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLC 590

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           + G    A+ +   M  +N  P+L     + +     G  ++A +L    ++ G
Sbjct: 591 SAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNG 644


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 203/418 (48%), Gaps = 27/418 (6%)

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS--PDKVSYYTVMGYLCKEKRI 297
           A + P+V+TY  L+ G C   R+ DA++++D M  +     PD V+  TV+  LCK  R+
Sbjct: 166 ASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRV 225

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
           +E    +E+ ++                     S  GC P+ VTY  +++ FCRVG +  
Sbjct: 226 QEALAFVEQRMS---------------------SVHGCPPNTVTYNCLIDAFCRVGNISM 264

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW--WTPNAITYSVV 415
           A +++++M + G   N V+    + GLC  G++  A E        W     NA+TYS +
Sbjct: 265 AYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTL 324

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +  L     +  A ++  E + +G  P  +    +I  L + G+++ A          G 
Sbjct: 325 VGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGF 384

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
            ++   +  LI GFC+K  L EA  LL +M      PD  TY T++    K G      E
Sbjct: 385 KLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDE 444

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
           L+ KM+  G  P+V+T+ T++H YC+VG++++ L++L  M           YN +I+ LC
Sbjct: 445 LLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLC 504

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
             G ++ A ++  ++   +  A+ +T + L++   +K +P  A+++  +M      PD
Sbjct: 505 KRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPD 562



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 207/440 (47%), Gaps = 56/440 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   +  +L  L++ +   G  R+  LM +     RP+  +Y  L+    +AG++ +A+ 
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALM-QGCASVRPDVVTYGILVNGLCKAGRVGDALR 193

Query: 198 VLSMM--QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE-RMQ-LAGITPNVLTYNCLI 253
           VL  M  Q   + P+++  NT +  L    ++ +AL F+E RM  + G  PN +TYNCLI
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLI 253

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR-------IKEVRD---- 302
             +C +  I  A +L+++M  +G   + V+  T++G LC+  R        +E R     
Sbjct: 254 DAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPE 313

Query: 303 ----------LMEKMVNDSN------LFHDQ----------------------GRIEEAK 324
                     L+  +++ +N      LFH++                      GR+E+A 
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDAC 373

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            + + M + G   D   Y  ++ GFCR   L +A ++LQ+M   G +P+  +Y   L+G 
Sbjct: 374 SMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGS 433

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  G      E++    ++   P+ IT+  ++HG  + GK+ EA  ++R M + G  P  
Sbjct: 434 CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N LI  LC+ G +D A +   E   K    NV  F +L++G   K   E+A  L+D 
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553

Query: 505 MYLCKKDPDTVTYTTIIDAL 524
           M   +  PD VT   +++ L
Sbjct: 554 MREERCFPDYVTVDVLMEWL 573



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 203/454 (44%), Gaps = 68/454 (14%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQK-AAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           AF+ ++ A +R   +     + ++MQ  A+V P+++     ++ L    ++  ALR L+ 
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDG 197

Query: 237 M--QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE--MPLKGCSPDKVSYYTVMGYLC 292
           M  Q   I P+V+T N ++ G C   R+++A+  +++    + GC P+ V+Y  ++   C
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC 257

Query: 293 KEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           +                        G I  A ELV +M   G   ++VT   +V G CR 
Sbjct: 258 R-----------------------VGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRA 294

Query: 353 GELDQAKKMLQQ---MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           G    A +  ++   ++  G K N V+Y+  +  L H      A E+ +    E  +P+A
Sbjct: 295 GRTGAALEFFREKRTVWPEG-KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDA 353

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           I Y  ++ GL + G+L +AC +   M + GF       N+LI   CR+ ++  A + +QE
Sbjct: 354 IMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQE 413

Query: 470 C-----------------------------------LNKGCAVNVVNFTSLIRGFCQKGD 494
                                               ++ GC  +V+ F +L+ G+C+ G 
Sbjct: 414 MKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGK 473

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           ++EAL +L  M      P+ V Y T+ID L K G V+ A EL  +M  K +   V T+  
Sbjct: 474 IDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNA 533

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV 588
           ++         E   +L+++M  +++C   Y  V
Sbjct: 534 LLKGLRDKNMPEKAFELMDQM-REERCFPDYVTV 566



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 137/324 (42%), Gaps = 44/324 (13%)

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC---KPNTVSYTAFLNGLCHNGKSLEAR 394
           DV  + +++    RV ++    ++   M   GC   +P+ V+Y   +NGLC  G+  +A 
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALM--QGCASVRPDVVTYGILVNGLCKAGRVGDAL 192

Query: 395 EMIN--TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK--GFFPTPVEINLL 450
            +++  + ++    P+ +T + V+ GL + G++ EA   V + +    G  P  V  N L
Sbjct: 193 RVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCL 252

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD--MYLC 508
           I + CR G +  A + +++  N+G   N+V   +++ G C+ G    AL    +      
Sbjct: 253 IDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWP 312

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
           +   + VTY+T++ AL     V  A EL  + +S+G  P  + Y T+I    Q G     
Sbjct: 313 EGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAG----- 367

Query: 569 LKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
                                        LE+A  +   +     K D    ++L+  + 
Sbjct: 368 ----------------------------RLEDACSMASSMKEAGFKLDTKAYNILIAGFC 399

Query: 629 NKGIPLLAYKVACRMFNRNLIPDL 652
            K     AY++   M    + PD+
Sbjct: 400 RKKRLHEAYELLQEMKEVGIRPDV 423



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 27/211 (12%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
           ++  ++ D   Y +++    + K    A  +L+ M   GI  RP+  +Y  L+    +AG
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI--RPDVCTYNTLLSGSCKAG 437

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
                  +L  M      P+++   T +H      K+ +ALR L  M  +GI PN + YN
Sbjct: 438 DFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYN 497

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI   C    +  AI+L DEM  K   P  V+ +  +        +K +R         
Sbjct: 498 TLIDFLCKRGDVDLAIELFDEMKEKSV-PANVTTFNAL--------LKGLR--------- 539

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
                D+   E+A EL++QM +  C PD VT
Sbjct: 540 -----DKNMPEKAFELMDQMREERCFPDYVT 565


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 223/465 (47%), Gaps = 17/465 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A++V   M  RG    P+A S+  L+V   R G++     +L++MQ      +   C   
Sbjct: 168 ARKVFDGMVTRG-GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVI 226

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           + V     +         RM   G  PNV+ Y   I G C    +K A  +++EM  KG 
Sbjct: 227 VRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGL 286

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-------------FHDQGRIEEAK 324
            P+  ++ +++  LCK    +    L  K++  S+              +  +G++  A+
Sbjct: 287 KPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAE 346

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L+ +M + G  P+  TYT +++G C+ G  + A +++ +M   G +PN  +Y A ++GL
Sbjct: 347 MLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGL 406

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  GK  EA +++  +  +    + +TY+V++    ++G ++ A D+   M + G  P  
Sbjct: 407 CKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDI 466

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
                LI   C++ +M+ ++K   +CL          +TS+I G+C+ G    AL + + 
Sbjct: 467 HTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFER 526

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M       D++TY  +I  L K  R+EEA  L   ML K LVP  VT  T+   YC+  +
Sbjct: 527 MVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREK 586

Query: 565 VEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
               + +L+++  ++K  T  N ++  L + G++E+A   L K L
Sbjct: 587 AVVAVSILDRLDKRRKNHTV-NVLVRKLSAIGHVEDASLFLKKAL 630



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 188/415 (45%), Gaps = 18/415 (4%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV-LS 200
           + Y   ++ L K    + A  VL  M  +G++      + L+    + G    A  + L 
Sbjct: 256 VNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLK 315

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           +++ ++  PN+      I       KLA+A   L RM   G+ PN  TY  LI G+C   
Sbjct: 316 LIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEG 375

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD---- 316
               A +L+++M  +G  P+  +Y  ++  LCK+ +I+E   ++ +M N+  L  D    
Sbjct: 376 SFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL-RMANNQGLQLDKVTY 434

Query: 317 ---------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    QG I  A +L N+M++ GC PD+ TYT ++  +C+  ++++++K+  +   
Sbjct: 435 TVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLA 494

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
               P   +YT+ + G C  GKS  A  +     +     ++ITY  ++ GL +E +L E
Sbjct: 495 IELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEE 554

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +   M+ K   P  V    L    CR  K   A   +   L+K    + VN   L+R
Sbjct: 555 ARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDR-LDKRRKNHTVNV--LVR 611

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
                G +E+A   L          D + YT+ I++   N +   ATE+  K+ S
Sbjct: 612 KLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFINSCYANKKYALATEISEKISS 666



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 173/398 (43%), Gaps = 11/398 (2%)

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           Y T          +    + M +MV     F + GR+ EA ++V +M   G    V T  
Sbjct: 97  YVTAATTFVDRGSLPMAHEAMRRMVA---AFAEAGRLPEAADMVFEMRSHGLPFCVETAN 153

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
            V+      G    A+K+   M   G   P+  S+ A + G C +G+  E   ++   + 
Sbjct: 154 WVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQG 213

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
           + +  +  T +V++    ++G+  +  ++ R M++ G  P  V     I  LC+   +  
Sbjct: 214 QGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQ 273

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD---PDTVTYTT 519
           A   ++E + KG   NV   TSLI G C+ G  E A  L   + L K     P+  TYT 
Sbjct: 274 AFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLF--LKLIKSSSYKPNVHTYTV 331

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK- 578
           +I    K G++  A  L+ +M+ +GL P   TY T+I  +C+ G      +L+ KM  + 
Sbjct: 332 MIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREG 391

Query: 579 -QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
            Q     YN +I+ LC  G ++EA K+L        + D  T  V++  +  +G    A 
Sbjct: 392 FQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYAL 451

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
            +  RM      PD+     +  R   + + EE+  L 
Sbjct: 452 DLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLF 489



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 169/367 (46%), Gaps = 36/367 (9%)

Query: 130 WADRQWR----------YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF 179
           W +R +R          Y+ +   Y +M+    K      A+ +L  M  +G+      +
Sbjct: 305 WTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTY 364

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
           + L+  + + G    A  +++ M++    PN+   N  I  L    K+ +A + L     
Sbjct: 365 TTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANN 424

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
            G+  + +TY  +I  +C    I  A+ L + M   GC PD  +Y T++   C++++++E
Sbjct: 425 QGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEE 484

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
            + L +K +              A ELV         P   TYT+++ G+C+VG+   A 
Sbjct: 485 SQKLFDKCL--------------AIELV---------PTKQTYTSMIAGYCKVGKSTSAL 521

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++ ++M  +GC+ ++++Y A ++GLC   +  EAR +     ++   P  +T   +    
Sbjct: 522 RVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEY 581

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            R  K   A  ++  + K+    T   +N+L++ L   G ++ A  F+++ L+   AV+ 
Sbjct: 582 CRREKAVVAVSILDRLDKRRKNHT---VNVLVRKLSAIGHVEDASLFLKKALDVDLAVDR 638

Query: 480 VNFTSLI 486
           + +TS I
Sbjct: 639 LAYTSFI 645



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 120/274 (43%), Gaps = 42/274 (15%)

Query: 423 GKLSEACDVVREMVKKGFFPTPVEI-NLLIQSLCREGKMDGAKKFMQECLNKGCAV-NVV 480
           G+L EA D+V EM   G  P  VE  N ++++    G    A+K     + +G  + +  
Sbjct: 128 GRLPEAADMVFEMRSHGL-PFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDAR 186

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
           +F +LI G C+ G +EE  +LL  M       D  T T I+    + GR  + +EL  +M
Sbjct: 187 SFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRM 246

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQ--VIENLCSFGYL 598
           L  G  P VV Y   I   C+   V+    +LE+M++K      Y    +I  LC  G+ 
Sbjct: 247 LEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWT 306

Query: 599 EEAGKILGKVLRTAS-KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
           E A ++  K+++++S K +  T  V++  Y                           CK 
Sbjct: 307 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGY---------------------------CK- 338

Query: 658 VSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
                  EGK   A+ L+ R VE+G + P +  +
Sbjct: 339 -------EGKLARAEMLLGRMVEQG-LAPNTNTY 364



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 129/283 (45%), Gaps = 12/283 (4%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R+  ++ +   Y  +++ L K    Q A +VLR+   +G++     ++ ++  + + G +
Sbjct: 388 RREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHI 447

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A+ + + M +    P++    T I       ++ ++ +  ++     + P   TY  +
Sbjct: 448 TYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSM 507

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----- 307
           I GYC + +   A+++ + M   GC  D ++Y  ++  LCKE R++E R L E M     
Sbjct: 508 IAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRL 567

Query: 308 ----VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
               V    L  +  R E+A   V+ + ++       T   +V     +G ++ A   L+
Sbjct: 568 VPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRRKNHTVNVLVRKLSAIGHVEDASLFLK 627

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGK---SLEAREMINTSEEE 403
           +        + ++YT+F+N    N K   + E  E I++S+++
Sbjct: 628 KALDVDLAVDRLAYTSFINSCYANKKYALATEISEKISSSQDK 670


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 233/472 (49%), Gaps = 38/472 (8%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
            + +++  L  +     A+ +   M  +G  C+P  F++  L+  Y +AG     + +L+
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKG--CKPNEFTFGILVRGYCKAGLTDKGLELLN 206

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M+   V PN +I NT +       +   + + +E+M+  G+ P+++T+N  I   C   
Sbjct: 207 AMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEG 266

Query: 261 RIKDAIKLIDEMPLK---GCS-PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           ++ DA ++  +M L    G   P+ ++Y  ++   CK   +++ + L E +  + +L   
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASL 326

Query: 317 Q------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           Q            G+  EA+ ++ QM+  G  P + +Y  +++G C++G L  AK ++  
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M  +G  P+ V+Y   L+G C  GK   A+ ++         PNA T ++++H L + G+
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           +SEA +++R+M +KG+    V  N+++  LC  G++D A + +     KG  V+      
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV-----KGMRVH------ 495

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
              G    G+L  +   L D  L + +  PD +TY+T+++ L K GR  EA  L  +M+ 
Sbjct: 496 ---GSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG 552

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
           + L P  V Y   IH +C+ G++    ++L+ M  K   K    YN +I  L
Sbjct: 553 EKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 233/524 (44%), Gaps = 50/524 (9%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMYVLSMMQK 204
           ++ I +K+     A    +L+  R  E +P  + Y ++  S  +  ++    ++   M  
Sbjct: 81  VVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVL 140

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
             +AP     N  I  L   + +  A    + M   G  PN  T+  L++GYC       
Sbjct: 141 CGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDK 200

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD--- 316
            ++L++ M   G  P+KV Y T++   C+E R  +   ++EKM     V D   F+    
Sbjct: 201 GLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRIS 260

Query: 317 ----QGRIEEAKELVNQM---SQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
               +G++ +A  + + M     +G   P+ +TY  ++ GFC+VG L+ AK + + +  +
Sbjct: 261 ALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
               +  SY  +L GL  +GK +EA  ++    ++   P+  +Y+++M GL + G LS+A
Sbjct: 321 DDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             +V  M + G  P  V    L+   C  GK+D AK  +QE +   C  N      L+  
Sbjct: 381 KTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG---- 544
             + G + EA  LL  M       DTVT   I+D L  +G +++A E++  M   G    
Sbjct: 441 LWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL 500

Query: 545 -------------------LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
                               +P ++TY T+++  C+ GR  +   L  +M+ +  Q    
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSV 560

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
           AYN  I + C  G +  A ++L  + +         CH  +E+Y
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKG-------CHKSLETY 597



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 231/520 (44%), Gaps = 40/520 (7%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + I Y +ML+   K  L + AK +   +         ++++  +    R GK   A  
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL  M    + P++   N  +  L     L+ A   +  M+  G+ P+ +TY CL+ GYC
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
            + ++  A  L+ EM    C P+  +   ++  L K  RI E  +L+ KM          
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467

Query: 312 --NLFHD----QGRIEEAKELVNQMSQMG-----------------------CIPDVVTY 342
             N+  D     G +++A E+V  M   G                       C+PD++TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           + ++NG C+ G   +AK +  +M     +P++V+Y  F++  C  GK   A  ++   E+
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
           +    +  TY+ ++ GL  + ++ E   ++ EM +KG  P     N  IQ LC   K++ 
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVED 647

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD-MYLCKKDPDTVTYTTII 521
           A   + E + K  A NV +F  LI  FC+  D + A  + +  + +C +      Y+ + 
Sbjct: 648 ATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEG--LYSLMF 705

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           + L   G++ +ATEL+  +L +G       Y+ ++   C+   +E    +L KM+ +   
Sbjct: 706 NELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYG 765

Query: 582 --RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
               A   VI+ L   G  +EA     K++  AS  + + 
Sbjct: 766 FDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVAN 805



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 207/444 (46%), Gaps = 41/444 (9%)

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M L GI P   T+N LI+  CD   +  A +L DEMP KGC P++ ++  ++   CK   
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197

Query: 297 IKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
             +  +L+  M +   L            F  +GR ++++++V +M + G +PD+VT+ +
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257

Query: 345 VVNGFCRVGELDQAKKMLQQM----YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
            ++  C+ G++  A ++   M    Y    +PN+++Y   L G C  G   +A+ +  + 
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
            E     +  +Y++ + GL R GK  EA  V+++M  KG  P+    N+L+  LC+ G +
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             AK  +      G   + V +  L+ G+C  G ++ A SLL +M      P+  T   +
Sbjct: 378 SDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNIL 437

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----- 575
           + +L K GR+ EA EL+ KM  KG     VT   ++   C  G ++  +++++ M     
Sbjct: 438 LHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497

Query: 576 -----------------LSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
                            L +  C      Y+ ++  LC  G   EA  +  +++    + 
Sbjct: 498 AALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557

Query: 616 DASTCHVLVESYLNKGIPLLAYKV 639
           D+   ++ +  +  +G    A++V
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRV 581



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 161/353 (45%), Gaps = 6/353 (1%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           P V  Y  ++    +   ++    + + M   G  P T ++   +  LC +     ARE+
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
            +   E+   PN  T+ +++ G  + G   +  +++  M   G  P  V  N ++ S CR
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM----YLCKKDP 512
           EG+ D ++K +++   +G   ++V F S I   C++G + +A  +  DM    YL    P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           +++TY  ++    K G +E+A  L   +     + ++ +Y   +    + G+  +   +L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 573 EKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           ++M  K    +  +YN +++ LC  G L +A  I+G + R     DA T   L+  Y + 
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           G    A  +   M   N +P+   C  +   L   G+  EA+ L+ +  E+G+
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 258/559 (46%), Gaps = 46/559 (8%)

Query: 74  RHPLVREVCRLI-ELRSAWSPK---LEGELRNLLRSLKPRQ--------ICAVLRSQADE 121
           +  LVR +C L+ E  S  +P    L+    NL  S+ P          + A L S+A  
Sbjct: 64  QQSLVRSICSLVCESYSQQTPHVRLLQSPSINL--SVNPDSLTHEQAITVVASLASEAGS 121

Query: 122 RVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
            VAL FF WA    ++R     Y+M   I+  T            +     E   E    
Sbjct: 122 MVALSFFNWAIGFPKFR-----YFMRFYIVCATSF----------IGNENFERAHEVMDC 166

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           ++  ++  GK + A+ ++  M+   +   +   N    V      +  A    + M++ G
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRG 226

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + P+ ++Y  +   YC + RI D  + + +M  +G   D  +   ++   C++     V 
Sbjct: 227 VCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVF 286

Query: 302 DLMEK---------MVNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
              +K         ++N ++L +    +G I++A E++ +M + G  P+V T+TA+++G 
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGL 346

Query: 350 CRVGELDQAKKM-LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
           C+ G  ++A ++ L+ +     KPN  +YT+ ++G C   K   A  +++  +E+   PN
Sbjct: 347 CKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPN 406

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
             TY+ ++ G  + G   +A +++  M K+GF       N  I SLC++G+   A K ++
Sbjct: 407 TKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLK 466

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           +    G   + V +T LI   C++ D  EAL     M+     PD  TY T+I A S+  
Sbjct: 467 KGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQR 526

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AY 585
           R+EE+ +L  + +  GLVPT  TY ++I  YC+   V   LK   +M S   C      Y
Sbjct: 527 RMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRM-SDHGCTPDSLTY 585

Query: 586 NQVIENLCSFGYLEEAGKI 604
             +I  LC    L+EA ++
Sbjct: 586 GALISGLCKESKLDEACQL 604



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 217/450 (48%), Gaps = 18/450 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A+ V   M  RG+ C P++ SY  + +AY R G++ +    L  M +     +   C   
Sbjct: 215 AENVFDEMRVRGV-C-PDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLM 272

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I         ++   + ++    G+ PN++ +  LI G C    IK A ++++EM  KG 
Sbjct: 273 ISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGW 332

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND----------SNLFHD---QGRIEEAK 324
            P+  ++  ++  LCK+   ++   L  K+V            +++ H    + ++  A+
Sbjct: 333 KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAE 392

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L+++M + G +P+  TYT +++G  + G  ++A +++  M   G   N  +Y AF++ L
Sbjct: 393 MLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSL 452

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  G+ LEA +++          + +TY++++  L R     EA     +M K G  P  
Sbjct: 453 CKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDM 512

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
              N LI +  R+ +M+ ++K   E +  G       +TS+I G+C+  ++  AL   + 
Sbjct: 513 HTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNR 572

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      PD++TY  +I  L K  +++EA +L   M+ KGL P  VT  T+ + YC+   
Sbjct: 573 MSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDD 632

Query: 565 VEDLLKLLEKMLSKQKCRTAYNQVIENLCS 594
               + +LE++  K   RT  N +I  LCS
Sbjct: 633 SATAMVILERLDKKLWIRTV-NTLIRKLCS 661



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 174/399 (43%), Gaps = 15/399 (3%)

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
           +R  EV D M +      +F + G+ +EA  +V +M   G +  V T   V      +G 
Sbjct: 158 ERAHEVMDCMVR------VFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGL 211

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           +  A+ +  +M   G  P++VSY       C  G+  +    +       +  +  T ++
Sbjct: 212 VGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTL 271

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++     +G  S       + V+ G  P  +    LI  LC+ G +  A + ++E + KG
Sbjct: 272 MISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKG 331

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD---PDTVTYTTIIDALSKNGRVE 531
              NV   T+LI G C+KG  E+A  L   + L + D   P+  TYT++I    K  ++ 
Sbjct: 332 WKPNVYTHTALIDGLCKKGWTEKAFRLF--LKLVRSDDYKPNVHTYTSMIHGYCKEDKLN 389

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQV 588
            A  L+ +M  +GLVP   TY  +I  + + G  E   +L++ ++ K+        YN  
Sbjct: 390 RAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMD-LMGKEGFSANIFTYNAF 448

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I++LC  G   EA K+L K  R   +AD  T  +L+     +     A     +MF   +
Sbjct: 449 IDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGV 508

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
            PD+     +      + + EE++ L    V  G +  K
Sbjct: 509 QPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTK 547



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 161/362 (44%), Gaps = 26/362 (7%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A + F    R   Y+ +   Y  M+    K      A+ +L  M  +G+    + ++ L+
Sbjct: 355 AFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLI 414

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             +S+AG    A  ++ +M K   + N+   N  I  L    +  +A + L++    G+ 
Sbjct: 415 DGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQ 474

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
            + +TY  LI   C     ++A+    +M   G  PD  +Y T++               
Sbjct: 475 ADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIA-------------- 520

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                     F  Q R+EE+++L  +   +G +P   TYT+++ G+CR   +  A K   
Sbjct: 521 ---------AFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFN 571

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M  HGC P++++Y A ++GLC   K  EA ++     ++  +P  +T   + +   ++ 
Sbjct: 572 RMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQD 631

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
             + A  ++  + KK +  T   +N LI+ LC E K+  A  F  + L+K   V+ V  T
Sbjct: 632 DSATAMVILERLDKKLWIRT---VNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLT 688

Query: 484 SL 485
           + 
Sbjct: 689 AF 690


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/511 (25%), Positives = 244/511 (47%), Gaps = 22/511 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y ++ ++Y+++     K+   + A  V + MA  G+      +S LM+A+ +       +
Sbjct: 172 YTYNGLIYFLV-----KSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVV 226

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M+   V PN+      I VL    +L +A R L +M+  G  P+V+T   LI+  
Sbjct: 227 GLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQIL 286

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM---GYLCKEKRIKEVRDLMEKMVNDSNL 313
           CD  R+ DA  +  +M      PD+V+Y T++   G     + + E+ + ++    + N+
Sbjct: 287 CDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNV 346

Query: 314 FH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                        GR++EA ++ ++M Q G IP   +Y ++++GF +    ++A ++   
Sbjct: 347 VSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNH 406

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M  HG  PN  ++  F+N    +G+SL+A +     + +   P+ +  + V++GL + G+
Sbjct: 407 MNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGR 466

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L  A  V  E+   G  P  +   ++I+   +    D A K   E +   CA +V+   S
Sbjct: 467 LGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNS 526

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI    + G   EA  +  ++     +P   TY T++  L + G+V+E  +L+  M S  
Sbjct: 527 LIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNS 586

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEA 601
             P ++TY TV+   C+ G V   L +L  M +   C    ++YN V+  L   G L+EA
Sbjct: 587 FPPNIITYNTVLDCLCKNGEVNYALDMLYSM-TMNGCMPDLSSYNTVMYGLVKEGRLDEA 645

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGI 632
             +  ++ +  +   A+ C +L  S++  G+
Sbjct: 646 FWMFCQMKKVLAPDYATVCTIL-PSFVRSGL 675



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 164/670 (24%), Positives = 282/670 (42%), Gaps = 70/670 (10%)

Query: 74  RHPLVREVCRLI-----ELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFF 128
           R P  R  CR +     E R +  P   G + ++LRS           + AD   AL+ F
Sbjct: 40  RRPSSRAGCRQLAPPPCEERVS-RPGDAGNVVHMLRS----------AAAADPEEALELF 88

Query: 129 YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR 188
               RQ R  H       MLE++          +V  LM R+ I+     F  +  A   
Sbjct: 89  LSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGV 148

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
            G LR+A   L +M++A +  N    N  I+ LV      +A+   + M   G+ P V T
Sbjct: 149 EGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRT 208

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM- 307
           Y+ L+  +      +  + L+ EM  +G  P+  SY   +  L +  R++E   ++ KM 
Sbjct: 209 YSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKME 268

Query: 308 --------VNDSNLFH---DQGRIEEAKELVNQMSQMGCIPD------------------ 338
                   V ++ L     D GR+ +AK++  +M      PD                  
Sbjct: 269 EEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSR 328

Query: 339 -----------------VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
                            VV+YTA V+  C+VG +D+A  +  +M   G  P   SY + +
Sbjct: 329 SVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLI 388

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G     +   A E+ N       TPN  T+ + ++   + G+  +A      M  KG  
Sbjct: 389 SGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIV 448

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N ++  L + G++  AK+   E    G + + + +T +I+   +  + +EA+ +
Sbjct: 449 PDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKI 508

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
             +M   +  PD +   ++ID L K GR  EA ++  ++    L PT  TY T++    +
Sbjct: 509 FAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGR 568

Query: 562 VGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G+V+++++LLE M S         YN V++ LC  G +  A  +L  +       D S+
Sbjct: 569 EGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSS 628

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
            + ++   + +G    A+ + C+M  + L PD      +    +  G  +EA    L  V
Sbjct: 629 YNTVMYGLVKEGRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKEA----LHTV 683

Query: 680 ERGHIQPKSE 689
               +QP S+
Sbjct: 684 REYILQPDSK 693



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 247/586 (42%), Gaps = 60/586 (10%)

Query: 112  CAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRG 171
            C    S ADE  A++ F       R   D +    ++++L K      A ++   +    
Sbjct: 495  CCSKASNADE--AMKIFAEMIEN-RCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMN 551

Query: 172  IECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
            +E     ++ L+    R GK++  M +L  M   +  PN++  NT +  L    ++  AL
Sbjct: 552  LEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYAL 611

Query: 232  RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
              L  M + G  P++ +YN ++ G     R+ +A  +  +M  K  +PD  +  T++   
Sbjct: 612  DMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK-KVLAPDYATVCTILPSF 670

Query: 292  CKEKRIKE--------------------VRDLMEKM---------------VNDSNLFHD 316
             +   +KE                    V  LME +               +  S L  D
Sbjct: 671  VRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLD 730

Query: 317  QGRIEE-------------AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
               +               A ELV +   +G      +Y A++ G      +D A+++  
Sbjct: 731  DLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFS 790

Query: 364  QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE---EWWTPNAITYSVVMHGLR 420
            +M   GC P+  +Y   L+ +   GKS+   +M+   EE   + +    +TY+ ++ GL 
Sbjct: 791  EMKRLGCDPDEFTYHLILDAM---GKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLV 847

Query: 421  REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
            +   L EA ++  +++ +GF PTP     L+  L ++G ++ A+    E L  GC  N  
Sbjct: 848  KSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCA 907

Query: 481  NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
             +  L+ G+   GD E+   L + M     +PD  +YT +ID L  +GR+ +      ++
Sbjct: 908  IYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL 967

Query: 541  LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYL 598
               GL P ++TY  +IH   + GR+E+ L L   M  K        YN +I  L   G  
Sbjct: 968  TDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKA 1027

Query: 599  EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
             EAGK+  ++L    K +  T + L+  Y   G P  A+    RM 
Sbjct: 1028 AEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMI 1073



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 154/321 (47%), Gaps = 19/321 (5%)

Query: 210  NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
            N LIC      LV  + +  A      M+  G  P+  TY+ ++       RI+D +K+ 
Sbjct: 770  NALICG-----LVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQ 824

Query: 270  DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------------NLFHD 316
            +EM  KG     V+Y T++  L K K + E  +L  +++++               L  D
Sbjct: 825  EEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKD 884

Query: 317  QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
             G IE+A+ L ++M + GC P+   Y  ++NG+   G+ ++  ++ + M   G  P+  S
Sbjct: 885  -GNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKS 943

Query: 377  YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
            YT  ++ LC +G+  +         +    P+ ITY++++HGL + G+L EA  +  +M 
Sbjct: 944  YTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDME 1003

Query: 437  KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            KKG  P     N LI  L + GK   A K  +E L KG   NV  + +LIRG+   G  E
Sbjct: 1004 KKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPE 1063

Query: 497  EALSLLDDMYLCKKDPDTVTY 517
             A +    M +    P++ TY
Sbjct: 1064 NAFAAYGRMIVGGCRPNSSTY 1084



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 126/559 (22%), Positives = 242/559 (43%), Gaps = 18/559 (3%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
            D I Y MM++  SK      A ++   M      C P+  A + L+    +AG+   A  
Sbjct: 485  DNITYTMMIKCCSKASNADEAMKIFAEMIEN--RCAPDVLAMNSLIDMLYKAGRGNEAWK 542

Query: 198  VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            +   +++  + P     NT +  L    K+ + ++ LE M      PN++TYN ++   C
Sbjct: 543  IFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLC 602

Query: 258  DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL---MEKMVNDSNL- 313
                +  A+ ++  M + GC PD  SY TVM  L KE R+ E   +   M+K++      
Sbjct: 603  KNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYAT 662

Query: 314  -------FHDQGRIEEAKELVNQ-MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                   F   G ++EA   V + + Q     D  +  +++ G  +    +++ +  + +
Sbjct: 663  VCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENI 722

Query: 366  YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
               G   + +  +  +   C + ++L A E++   E    +    +Y+ ++ GL  E  +
Sbjct: 723  ASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLI 782

Query: 426  SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
              A ++  EM + G  P     +L++ ++ +  +++   K  +E  NKG     V + ++
Sbjct: 783  DIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTI 842

Query: 486  IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
            I G  +   L+EA++L   +      P   TY  ++D L K+G +E+A  L  +ML  G 
Sbjct: 843  ISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGC 902

Query: 546  VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGK 603
             P    Y  +++ Y   G  E + +L E M+ +       +Y  VI+ LC+ G L +   
Sbjct: 903  EPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLS 962

Query: 604  ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
               ++     + D  T ++L+      G    A  +   M  + + P+L     +   L 
Sbjct: 963  YFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLG 1022

Query: 664  LEGKSEEADTLMLRFVERG 682
              GK+ EA  +    + +G
Sbjct: 1023 KAGKAAEAGKMYEELLAKG 1041



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 168/421 (39%), Gaps = 62/421 (14%)

Query: 67   VLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQ 126
            +L +D F  P++R  C+  E  +A   +L  +  NL  SLK     A++    DE     
Sbjct: 727  LLLDDLFLSPIIRHFCKHKEALAAH--ELVKKFENLGVSLKTGSYNALICGLVDE----- 779

Query: 127  FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV-- 184
                                         L   A+ +   M R G  C P+ F+Y ++  
Sbjct: 780  ----------------------------DLIDIAEELFSEMKRLG--CDPDEFTYHLILD 809

Query: 185  AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
            A  ++ ++ + + +   M         +  NT I  LV    L +A+    ++   G +P
Sbjct: 810  AMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSP 869

Query: 245  NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
               TY  L+ G      I+DA  L DEM   GC P+   Y  ++                
Sbjct: 870  TPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILL---------------- 913

Query: 305  EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                   N +   G  E+  EL   M + G  PD+ +YT V++  C  G L+      +Q
Sbjct: 914  -------NGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQ 966

Query: 365  MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
            +   G +P+ ++Y   ++GL  +G+  EA  + N  E++   PN  TY+ ++  L + GK
Sbjct: 967  LTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGK 1026

Query: 425  LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             +EA  +  E++ KG+ P     N LI+     G  + A       +  GC  N   +  
Sbjct: 1027 AAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQ 1086

Query: 485  L 485
            L
Sbjct: 1087 L 1087


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 227/467 (48%), Gaps = 28/467 (5%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVA-PNLLICNTAIHVL 221
           VL +  ++GI      F+ L+       K+++A+++   + +  +  PN ++  T ++ L
Sbjct: 129 VLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGL 188

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
                  KA   L  M+     PN   Y+ +I  +C    +  A  L++EM  K   PD 
Sbjct: 189 CKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDI 248

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
            +Y T++  LCK  + + VR L  +M+                        +   P+V T
Sbjct: 249 FTYSTLIDALCKLSQWENVRTLFLEMI-----------------------HLNIYPNVCT 285

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           + +V++G C+ G+++ A+++++ M   G  P+ ++Y   ++G    G+   ARE+ ++  
Sbjct: 286 FNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMI 345

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
            +   PN I+Y+++++G  R+ K+ EA  V RE+ +KG  P+ V  N+L+  L   G+  
Sbjct: 346 NKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTK 405

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A+ F  E L+ G   ++    +L+ G+ + G +EEA+S    +   ++D +   YT +I
Sbjct: 406 SAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVI 465

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           D L KNG++++A     K+   GL P V+TY  +I  YCQ G +++   +L KM     C
Sbjct: 466 DGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM-EDNGC 524

Query: 582 ---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
                 YN ++        + E    L ++   +   +A+T  +L++
Sbjct: 525 LADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 184/395 (46%), Gaps = 14/395 (3%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A+  F    R+     + ++Y  ++  L K    Q A  +LRLM +   +     +S ++
Sbjct: 161 AVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVI 220

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA-LRFLERMQLAGI 242
            A+ + G L  A  +L+ M++ ++ P++   +T I  L   ++       FLE + L  I
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHL-NI 279

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
            PNV T+N +I G C   +++DA +++  M  KG  PD ++Y  ++       ++   R+
Sbjct: 280 YPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRARE 339

Query: 303 LMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           + + M+N S            N +  Q +I+EA ++  ++SQ G  P +VT   +++G  
Sbjct: 340 IFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLF 399

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
            +G    A+    +M   G  P+  ++   L G   NG   EA    +  E      N  
Sbjct: 400 ELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQ 459

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            Y+ V+ GL + GKL +A     ++   G  P  +    +I   C+EG +D AK  +++ 
Sbjct: 460 IYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM 519

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
            + GC  +   +  ++RGF +   + E  + L+++
Sbjct: 520 EDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 3/313 (0%)

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT-SE 401
           + VVN  C +   D    +L   +  G   N V +   L GL    K  +A  +      
Sbjct: 111 SIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVR 170

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           E    PN + Y  VM+GL ++G   +A D++R M +    P     +++I + C++G +D
Sbjct: 171 ENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLD 230

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
           GA   + E   K    ++  +++LI   C+    E   +L  +M      P+  T+ ++I
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--Q 579
           D L K G+VE+A E+M  M+ KG+ P V+TY  +I  Y   G+V+   ++ + M++K  +
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
               +YN +I        ++EA ++  ++ +   K    TC+VL+      G    A   
Sbjct: 351 PNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNF 410

Query: 640 ACRMFNRNLIPDL 652
              M +   IPDL
Sbjct: 411 FDEMLSAGHIPDL 423



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 164/354 (46%), Gaps = 16/354 (4%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGK 191
           Q   + +  +Y ++++   K  +  GA  +L  M ++ I   P+ F+Y  L+ A  +  +
Sbjct: 206 QGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIP--PDIFTYSTLIDALCKLSQ 263

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
             N   +   M    + PN+   N+ I  L    K+  A   +  M   G+ P+V+TYN 
Sbjct: 264 WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNM 323

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RD 302
           +I GY    ++  A ++ D M  K   P+ +SY  ++    ++K+I E          + 
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKG 383

Query: 303 LMEKMVNDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
           L   +V  + L H   + GR + A+   ++M   G IPD+ T+  ++ G+ + G +++A 
Sbjct: 384 LKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAM 443

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
               ++       N   YTA ++GLC NGK  +A             P+ ITY+ ++ G 
Sbjct: 444 SHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGY 503

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            +EG L EA D++R+M   G        N++++   R  K+   K F++E   K
Sbjct: 504 CQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGK 557



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 153/330 (46%), Gaps = 8/330 (2%)

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            V N F  V  LD A  + +QM      P+ VS++  L  L H         +     + 
Sbjct: 42  GVSNEFENVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKL 101

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
               +    S+V++      +      V+    KKG     V  N L++ L  E K+  A
Sbjct: 102 RIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDA 161

Query: 464 KKFMQECLNKG-CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
               ++ + +  C  N V + +++ G C+KG  ++A  LL  M      P+T  Y+ +ID
Sbjct: 162 VHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVID 221

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQK 580
           A  K+G ++ AT L+ +M  K + P + TY T+I   C++ + E++  L  +M  L+   
Sbjct: 222 AFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYP 281

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               +N VI+ LC  G +E+A +I+  ++      D  T +++++ Y  +G    A ++ 
Sbjct: 282 NVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIF 341

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
             M N+++ P++     +S  +++ G + +
Sbjct: 342 DSMINKSIEPNI-----ISYNILINGYARQ 366



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 123/299 (41%), Gaps = 56/299 (18%)

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE---INLL 450
           R+M+ T       P+ +++S ++  L      S    + RE+ K      PV    ++++
Sbjct: 61  RQMVRTKP----LPSVVSFSKLLKALVHMKHYSSVVSLFREIHK---LRIPVHEFILSIV 113

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY---L 507
           + S C   + D     +     KG   N V F +L+RG   +  +++A+ L   +    +
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENI 173

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
           C  +P+ V Y T+++ L K G  ++A +L+  M      P    Y  VI  +C+ G ++ 
Sbjct: 174 C--EPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDG 231

Query: 568 LLKLLEKMLSKQKCRT----AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
              LL +M  KQK        Y+ +I+ LC     E         +RT            
Sbjct: 232 ATSLLNEM--KQKSIPPDIFTYSTLIDALCKLSQWEN--------VRT------------ 269

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
                          +   M + N+ P++     V + L  EGK E+A+ +M   +E+G
Sbjct: 270 ---------------LFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKG 313


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 203/417 (48%), Gaps = 16/417 (3%)

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           K L+ +E    AG  PN + YN LI GYC    +   I L+ EM  KG  P  V+Y T+M
Sbjct: 277 KGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLM 336

Query: 289 GYLCKEKRIKEVRDLMEKM--------VNDSNLFHDQ----GRIEEAKELVNQMSQMGCI 336
            +L ++  ++++  L+ +M        V   N   D         +A  ++ QM   GC 
Sbjct: 337 SWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCD 396

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PD +T++ +++G C+ G + +A+++L++       PN  SYT+ ++G C  G+ + A  +
Sbjct: 397 PDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNL 456

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +    E   TP+ +T+  ++HGL   G++SEA  V  +M  +   P     N+LI  LC+
Sbjct: 457 LVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCK 516

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           +  +  A+  ++E L +    +   +T+LI GF +   L+EA  + + M      PD V 
Sbjct: 517 KKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVG 576

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y  +I    + G + EA E M  M   G +P   TY T+I  Y + G +   L LL  M+
Sbjct: 577 YNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMM 636

Query: 577 SKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
            K++C+    AY+ +I   C  G  + A  + G +       +  T  +L+ S   K
Sbjct: 637 -KRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKK 692



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 208/443 (46%), Gaps = 16/443 (3%)

Query: 168 ARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
           AR G  C P A  Y  L+  Y R G +   + +L  M+   + P ++   T +  L    
Sbjct: 284 ARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKG 343

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
            L K    L  M+   + PNV  YN +I   C       A+ ++ +M   GC PD +++ 
Sbjct: 344 DLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFS 403

Query: 286 TVMGYLCKEKRIKEVRDLMEK---------MVNDSNLFHD---QGRIEEAKELVNQMSQM 333
           T++  LC+E R++E   L+ +         + + ++L H    +G +  A  L+ +M + 
Sbjct: 404 TLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMER 463

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  PDVVT+ A+++G    G++ +A  + ++M      P+   Y   ++GLC       A
Sbjct: 464 GHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAA 523

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
           R +I    E+   P+   Y+ ++ G  R   L EA  +   M +KG  P  V  N +I+ 
Sbjct: 524 RNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKG 583

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C+ G M+ A + M      G   +   +T+LI G+ ++G++  ALSLL DM   +  P+
Sbjct: 584 YCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPN 643

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            V Y+++I+   K G  + A  L   M S+GL P V+TY  +I    +  +V       E
Sbjct: 644 VVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFE 703

Query: 574 KMLSKQKCRTAY--NQVIENLCS 594
            ML  Q     Y  + ++  LC+
Sbjct: 704 YMLLNQCSPNDYTLHSLVTGLCN 726



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 222/486 (45%), Gaps = 41/486 (8%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAG 190
           R+ R   +  +Y  +++ L K +    A  VL+ M   G  C P+A  FS L+    + G
Sbjct: 356 RERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGG--CDPDAITFSTLISGLCQEG 413

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           +++ A  +L    +  + PNL    + IH   V  ++  A   L  M   G TP+V+T+ 
Sbjct: 414 RVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFG 473

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI G     ++ +A+ + ++M  +   PD   Y  ++  LCK+K +   R+L+E+M+ +
Sbjct: 474 ALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEML-E 532

Query: 311 SNLFHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
            N+  D+               ++EA+++   M Q G  PDVV Y A++ G+C+ G +++
Sbjct: 533 QNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNE 592

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A + +  M   G  P+  +YT  + G    G    A  ++    +    PN + YS +++
Sbjct: 593 AVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLIN 652

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  + G    A  +   M  +G FP  +   +LI SL ++ K+  A  + +  L   C+ 
Sbjct: 653 GYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSP 712

Query: 478 NVVNFTSLIRGFCQ------------------KGDLEEAL-SLLDDMYLCKKDPDTVTYT 518
           N     SL+ G C                   KG L +   +L++D    + DP    Y 
Sbjct: 713 NDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVND----RCDPRNSAYN 768

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            II +L  +  + EA +L  KM +KG  P   T+ ++++ +C VG+  +   +L     +
Sbjct: 769 AIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQR 828

Query: 579 QKCRTA 584
            +   A
Sbjct: 829 DELEVA 834



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 119/505 (23%), Positives = 222/505 (43%), Gaps = 36/505 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  ++  L +    +    +L  M  R +    + ++ ++ A  +      A+ VL  
Sbjct: 330 VTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQ 389

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M      P+ +  +T I  L    ++ +A R L       + PN+ +Y  LI G+C    
Sbjct: 390 MFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGE 449

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFH- 315
           +  A  L+ EM  +G +PD V++  ++  L    ++ E   + EKM     + D+N+++ 
Sbjct: 450 VIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNV 509

Query: 316 ------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                  +  +  A+ L+ +M +    PD   YT +++GF R   LD+A+K+ + M   G
Sbjct: 510 LISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKG 569

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             P+ V Y A + G C  G   EA E ++T  +    P+  TY+ ++ G  ++G +S A 
Sbjct: 570 IHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGAL 629

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            ++ +M+K+   P  V  + LI   C+ G  D A+       ++G   NV+ +T LI   
Sbjct: 630 SLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSL 689

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
            +K  +  A    + M L +  P+  T  +++  L  +         M  ++S     TV
Sbjct: 690 FKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNS---------MASIISSHCSSTV 740

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILG 606
             +          G + D+     + L   +C    +AYN +I +LC    L EA  +  
Sbjct: 741 NLHGK--------GALLDIF----RALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKN 788

Query: 607 KVLRTASKADASTCHVLVESYLNKG 631
           K+     K D++T   L+  + + G
Sbjct: 789 KMANKGYKPDSATFLSLLYGFCSVG 813



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 152/310 (49%), Gaps = 2/310 (0%)

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           ++A++L ++M       D  +   +V G C  G +++  K+++  +  GC PN V Y   
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++G C  G       ++   E +   P  +TY  +M  L R+G L +   ++ EM ++  
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P     N +I +LC+      A   +++    GC  + + F++LI G CQ+G ++EA  
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           LL +    + +P+  +YT++I      G V  A+ L+++M+ +G  P VVT+  +IH   
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 561 QVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
             G+V + L + EKM ++Q    A  YN +I  LC    L  A  ++ ++L      D  
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540

Query: 619 TCHVLVESYL 628
               L++ ++
Sbjct: 541 VYTTLIDGFI 550



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 145/336 (43%), Gaps = 6/336 (1%)

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCK---PNTVSYTAFLNGLCHNGKSLEAREMIN 398
           ++A++    R G  D     L+ M   G     P      A +      G   +A EM  
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212

Query: 399 TSEEEWWT-PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
            + E   T P A   + ++  L    +  +A  +  EM+ +          ++++ LC E
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLE 272

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G ++   K ++     GC  N V +  LI G+C++GD+   + LL +M      P  VTY
Sbjct: 273 GLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTY 332

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
            T++  L + G +E+   L+ +M  + L P V  Y +VI   C+       L +L++M +
Sbjct: 333 GTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFA 392

Query: 578 K--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
                    ++ +I  LC  G ++EA ++L +  R     + S+   L+  +  +G  ++
Sbjct: 393 GGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIV 452

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
           A  +   M  R   PD+     +   L++ G+  EA
Sbjct: 453 ASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEA 488



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 4/264 (1%)

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           E K +E C   RE    G  P     N L++ L    + D A+K   E L +    +  +
Sbjct: 204 EAKAAEMCQRARE--HHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYS 261

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
              ++RG C +G +E+ L L++  +     P+ V Y  +ID   + G V     L+ +M 
Sbjct: 262 TCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEME 321

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLE 599
           +KGL+PTVVTY T++    + G +E +  LL +M  ++       YN VI+ LC      
Sbjct: 322 AKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSAS 381

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
           +A  +L ++       DA T   L+     +G    A ++        L P+L     + 
Sbjct: 382 QALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLI 441

Query: 660 ERLILEGKSEEADTLMLRFVERGH 683
               + G+   A  L++  +ERGH
Sbjct: 442 HGFCVRGEVIVASNLLVEMMERGH 465


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 246/510 (48%), Gaps = 35/510 (6%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ ++   ++      A+ + ++M+   V P  +  N  I+      ++  A   + ++ 
Sbjct: 57  FTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKIL 116

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK--R 296
             G  PNV+T+  L+KG+C   ++ DA+ + DEM  +    D V Y T++  LCK K  +
Sbjct: 117 KWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGK 176

Query: 297 IKEVRDLMEKM----------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYT 343
            +    L++KM          +  + + H     G I EA+ L ++M   G  PD+ TY+
Sbjct: 177 PRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYS 236

Query: 344 AVVNGFCRVGE----------------LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           +++ G CR G+                +D+A+++   M   G + + ++Y   +NG C N
Sbjct: 237 SLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLN 296

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            K  EAR++ +   E    P+ ITY+++MHG     K+ EA ++   M+++G  P     
Sbjct: 297 NKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSY 356

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM-Y 506
           N+LI+  C+  ++  A   +++   K    N++ + S++ G C+ G + +A  L+D+M Y
Sbjct: 357 NILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHY 416

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML-SKGLVPTVVTYRTVIHRYCQVGRV 565
            C+  PD  TY  ++++L +   VE+A      ++  +   P V +Y  +I   C+  R+
Sbjct: 417 CCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRL 476

Query: 566 EDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           ++ + L   M  K        YN +++ L +   L++A  +L +++      +  T ++L
Sbjct: 477 DEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNIL 536

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
           +      G P  A K++  +  R   PD+K
Sbjct: 537 INGLHKGGRPKTAQKISLYLSIRGYHPDVK 566



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 200/431 (46%), Gaps = 39/431 (9%)

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
           C    I DA+ L   M      P  V +  ++G + K +      DL   M         
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  N F   G+++ A  ++ ++ + GC P+VVT+T ++ GFC   ++  A  +  +
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 365 MYHHGCKPNTVSYTAFLNGLCHN--GKSLEAREMINTSEE-EWWTPNAITYSVVMHGLRR 421
           M     + + V Y   +NGLC +  GK   A +++   EE +   PN I Y+ V+HGL +
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG----------------KMDGAKK 465
           +G ++EA  +  +M+ +G FP     + LI  LCR G                K+D A++
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
                + +G   +++N+  L+ G+C    + EA  L   M    + PDT+TYT ++    
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-- 583
              +V+EA  L   M+ +GLVP V +Y  +I  YC+  RV + + LLE M  K       
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNII 389

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTA-SKADASTCHVLVESY-----LNKGIPLLAY 637
            YN V++ LC  G + +A K++ ++        D +T ++L+ES      + K I    +
Sbjct: 390 TYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKH 449

Query: 638 KVACRMFNRNL 648
            +  R F  N+
Sbjct: 450 LIFERSFAPNV 460



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 145/310 (46%), Gaps = 29/310 (9%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+ +  +M  RG +     ++ LM  Y    K+  A  +  MM +    P+ +     +H
Sbjct: 267 ARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMH 326

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
              + +K+ +A      M   G+ P+V +YN LIKGYC   R+ +A+ L+++M LK   P
Sbjct: 327 GYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVP 386

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI--- 336
           + ++Y +V+  LCK                        G I +A +LV++M    C    
Sbjct: 387 NIITYNSVVDGLCKS-----------------------GGILDAWKLVDEMHY--CCQPP 421

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQM-YHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           PDV TY  ++   CR+  +++A    + + +     PN  SY   ++G C N +  EA  
Sbjct: 422 PDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAIN 481

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           + N    +   P+ +TY++++  L    +L +A  ++ ++V +G  P     N+LI  L 
Sbjct: 482 LFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLH 541

Query: 456 REGKMDGAKK 465
           + G+   A+K
Sbjct: 542 KGGRPKTAQK 551



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 23/298 (7%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ + ++ ++  + +    + A D+   M  KG  P  V  N+LI   C  G+MD A   
Sbjct: 52  PSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSV 111

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL-- 524
           M + L  GC  NVV FT+L++GFC    + +AL + D+M   +   D V Y T+I+ L  
Sbjct: 112 MGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCK 171

Query: 525 SKNGRVEEATELMMKMLSKGLV-PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
           SK G+   A +L+ KM  + LV P ++ Y TV+H  C+ G + +   L  KM+ +     
Sbjct: 172 SKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPD 231

Query: 584 --AYNQVIENLCSFGY----------------LEEAGKILGKVLRTASKADASTCHVLVE 625
              Y+ +I  LC  G                 ++EA ++   ++    + D    ++L+ 
Sbjct: 232 IFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMN 291

Query: 626 SY-LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            Y LN  +   A K+   M  R   PD      +     L  K +EA  L    +ERG
Sbjct: 292 GYCLNNKVG-EARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERG 348



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 18/293 (6%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           +HD I Y +++           A+++  +M  RG +     ++ LM  Y    K+  A  
Sbjct: 280 QHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARN 339

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M +  + P++   N  I       ++ +A+  LE M L  + PN++TYN ++ G C
Sbjct: 340 LFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLC 399

Query: 258 DLHRIKDAIKLIDEMPLKGC---SPDKVSYYTVMGYLCK----EKRIKEVRDLMEKMVND 310
               I DA KL+DEM    C    PD  +Y  ++  LC+    EK I   + L+ +    
Sbjct: 400 KSGGILDAWKLVDEM--HYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFA 457

Query: 311 SNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
            N++             R++EA  L N M     +PD+VTY  +++      +LD+A  +
Sbjct: 458 PNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIAL 517

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           L Q+   G  PN  +Y   +NGL   G+   A+++        + P+  TY +
Sbjct: 518 LVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTYII 570



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 7/199 (3%)

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+   +++A++L   M      P  V +T I+  ++K      A +L   M  KG+VP  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILG 606
           VT+  +I+ +C +G+++    ++ K+L K  CR     +  +++  C    + +A  I  
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKIL-KWGCRPNVVTFTTLMKGFCVNDKMLDALYIYD 148

Query: 607 KVLRTASKADASTCHVLVESYLNK--GIPLLAYKVACRMFNRNLI-PDLKLCKKVSERLI 663
           +++    + D      L+        G P  A ++  +M  R L+ P+L +   V   L 
Sbjct: 149 EMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLC 208

Query: 664 LEGKSEEADTLMLRFVERG 682
            +G   EA  L  + + +G
Sbjct: 209 KDGNINEARVLCSKMIVQG 227


>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/578 (24%), Positives = 262/578 (45%), Gaps = 47/578 (8%)

Query: 67  VLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVL-RSQADERVAL 125
           +L + +  + +V  +C  ++  ++    L  E+  LL  L  ++I  VL R Q+D   AL
Sbjct: 59  LLPQTQNPNNIVNLICSNLKQHNSNLALLHTEVNALLPHLGAQEISRVLLRCQSDSFTAL 118

Query: 126 QFFYWADRQWRYRHDPIVYYMMLEILSKTK--------LCQGAKRVLRLMARRGI----- 172
            FF W       R     Y +++  L+ ++        LC+  + V   +    +     
Sbjct: 119 SFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELVKDDLPSEDVFKNLI 178

Query: 173 ----ECR--PEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
               +C   P  F  L+ AY R G++R  +     M +    P ++  N  ++ L+  N 
Sbjct: 179 LCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNY 238

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
             +     E M+  GI PN+ T+N L    C         K +++M  +G  PD V+Y T
Sbjct: 239 TDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNT 298

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++   C+                       +GR+++A  L   M + G +PD+V+YTA++
Sbjct: 299 LINSYCR-----------------------KGRLDDAFYLYKIMYRRGVVPDLVSYTALM 335

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           NG C+ G + +A ++  +M H G  P+ V+Y   ++G C  GK  E+R +++       +
Sbjct: 336 NGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGIS 395

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P++ T  V++ G  +EGK   A ++V E+ + G   +    + LI +LCRE +   AK  
Sbjct: 396 PDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNL 455

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           ++     G    +  +  LI+ FCQ   + EAL L  +M   +  P+  TY  +I  LS+
Sbjct: 456 LERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSR 515

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ---VGRVEDLLKLLEKMLSKQKCRT 583
             R  E   L+ +M++ G++P +   R + + YC+   + + E LL    K        +
Sbjct: 516 LSRSMEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTES 575

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
            +N +I    + G +  + +I   +L+     +  TC+
Sbjct: 576 -FNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCN 612



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 185/371 (49%), Gaps = 4/371 (1%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR+ E      +M ++G +P V+T   ++NG  ++   D+  ++ ++M   G  PN  ++
Sbjct: 202 GRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTF 261

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
               + LC +G + +  + +   EEE + P+ +TY+ +++   R+G+L +A  + + M +
Sbjct: 262 NILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYR 321

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P  V    L+  LC+EG++  A +     +++G + ++V + +LI G+C++G ++E
Sbjct: 322 RGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQE 381

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           + SLL DM      PD+ T   +++   K G+   A  L++++   G+  +   Y  +I 
Sbjct: 382 SRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIV 441

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
             C+  R      LLE+M SK   +     YN++I++ C    + EA  +  +++    K
Sbjct: 442 ALCRENRPFAAKNLLERM-SKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIK 500

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            + +T   ++         +    +   M    ++PDL++C+ +      E   ++A++L
Sbjct: 501 PNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESL 560

Query: 675 MLRFVERGHIQ 685
           +  F +   I 
Sbjct: 561 LSFFAKEFQIH 571



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 160/350 (45%), Gaps = 2/350 (0%)

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C  D V +  +V  + R+G + +  +  ++M   G  P  ++    LNGL     +    
Sbjct: 184 CNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCW 243

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E+    E     PN  T++++ H L ++G   +    + +M ++GF P  V  N LI S 
Sbjct: 244 EVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSY 303

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CR+G++D A    +    +G   ++V++T+L+ G C++G + EA  L   M      PD 
Sbjct: 304 CRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDI 363

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VTY T+I    K G+++E+  L+  M+  G+ P   T   ++  Y + G+    L L+ +
Sbjct: 364 VTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVE 423

Query: 575 M--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           +        +  Y+ +I  LC       A  +L ++ +   K +    + L++S+     
Sbjct: 424 LQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDC 483

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              A  +   M ++ + P+L   + V   L    +S E ++L+   V  G
Sbjct: 484 IAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASG 533


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 246/525 (46%), Gaps = 17/525 (3%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSM 201
           Y  M++ L K        ++L  +   G++    A  Y  LM A  ++G++  A+ +   
Sbjct: 232 YTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGR 291

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+++ VAP+++     I+ L   ++  +    L  M+  GITPN +  N LI  +C    
Sbjct: 292 MEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGH 351

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD----- 316
             +AI+L DEM  K      V+Y  +   LCKE  ++    ++E+M++     H      
Sbjct: 352 FTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNS 411

Query: 317 --------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                    GR+E    L+++M + G  P+    TA     C+     +A  +  +M   
Sbjct: 412 VVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEK 471

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G   N  +  A ++GLC       A E++ T   +    + ITY++++ G  ++ K+ EA
Sbjct: 472 GLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEA 531

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             +  +M++KGF P     N +I + C  GKM+ A   + +   +G   +VV++ ++I G
Sbjct: 532 LKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDG 591

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +C+  D+++A   L+++  C   P+ V Y  +I    +NG +  A  ++  M S G+ PT
Sbjct: 592 YCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPT 651

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILG 606
            VTY +++H  C  G V++   + E+    S +     Y  +I+ LC  G ++EA     
Sbjct: 652 NVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFE 711

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           ++   +   +  T   L+ +Y   G    A K+   M +  ++PD
Sbjct: 712 EMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPD 756



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 213/434 (49%), Gaps = 27/434 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY-SRAGKLRNAMYVLS 200
           + Y ++   L K    + A+R+L  M   G+      F+ ++     R G+L + + ++S
Sbjct: 372 VTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLIS 431

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M K  + PN  +       L  G +  +A+    +M   G+  N+ T N LI G C+  
Sbjct: 432 EMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGK 491

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
            +K A +++  M  KG   D ++Y  ++   CK+ +I                       
Sbjct: 492 NMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKI----------------------- 528

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           EEA +L + M + G  PD   + ++++ +C +G++++A  +L QM   G +P+ VSY   
Sbjct: 529 EEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTI 588

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++G C      +A E +N        PNA+ Y+ ++ G  R G +S A  V+  M   G 
Sbjct: 589 IDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGI 648

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            PT V    L+  +C  G +D AK   ++       V VV +T +I+G C+ G ++EA++
Sbjct: 649 QPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMN 708

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
             ++M      P+ +TYTT++ A  K+G  EEA++L  +M+S G+VP  V+Y T++  + 
Sbjct: 709 YFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFS 768

Query: 561 QVGRVEDLLKLLEK 574
           Q   V+ L K +EK
Sbjct: 769 Q---VDSLDKAIEK 779



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 207/466 (44%), Gaps = 18/466 (3%)

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV-VGNKLAKALRFLERMQLAGI 242
           V  S  G LR A+    ++     +P++  CN  +  L   GN  A    F E      +
Sbjct: 166 VTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTV 225

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC--SPDKVSYYTVMGYLCKEKRIKEV 300
           TPN  +Y  +IK  C + ++ D  K++ ++   G   S   V Y  +M  LCK  R+ E 
Sbjct: 226 TPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEA 285

Query: 301 RDLMEKM----VNDS--------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             L  +M    V  S        N      R  E   L+ +M  +G  P+ V    +++ 
Sbjct: 286 IRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDW 345

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
            CR G   +A ++  +M     K   V+Y      LC  G+   A  ++        T +
Sbjct: 346 HCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIH 405

Query: 409 AITYSVVMHG-LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           +  ++ V+ G L+R G+L     ++ EMVK+G  P    +    + LC+  +   A    
Sbjct: 406 SGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIW 465

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            + L KG  +N+    +LI G C+  +++ A  +L  M     + D +TY  +I    K+
Sbjct: 466 LKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKD 525

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAY 585
            ++EEA +L   M+ KG  P    + ++IH YC +G++E+ L LL +M  +  Q    +Y
Sbjct: 526 SKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSY 585

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
             +I+  C    +++A + L +++    K +A   + L+  Y   G
Sbjct: 586 GTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNG 631



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 203/434 (46%), Gaps = 30/434 (6%)

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEM-PLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           +P+V T N L++       +    K+ DEM   K  +P+  SY +++  LCK  ++ +  
Sbjct: 190 SPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGF 249

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
            ++      S+L H                  G +P    Y  +++  C+ G +D+A ++
Sbjct: 250 KIL------SDLIH-----------AGLQQSAGAVP----YNLLMDALCKSGRVDEAIRL 288

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             +M      P+ V++   +NGL  + +  E   ++   E    TPN +  + ++    R
Sbjct: 289 KGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCR 348

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           +G  +EA  +  EMV K    T V  NL+ ++LC+EG+M+ A++ ++E L+ G  ++   
Sbjct: 349 KGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGL 408

Query: 482 FTSLIRGFCQK-GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
           F S++ G  Q+ G LE  + L+ +M      P+    T     L +  R +EA  + +KM
Sbjct: 409 FNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKM 468

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYL 598
           L KGL   + T   +IH  C+   ++   ++L  M++K  +     YN +I+  C    +
Sbjct: 469 LEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKI 528

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           EEA K+   ++R   K DA   + ++ +Y + G    A  +  +M    + PD+     V
Sbjct: 529 EEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDV-----V 583

Query: 659 SERLILEGKSEEAD 672
           S   I++G  +  D
Sbjct: 584 SYGTIIDGYCKAKD 597



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 135/296 (45%), Gaps = 23/296 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y +M++   K    + A ++   M R+G +     F+ ++ AY   GK+  A+++L
Sbjct: 511 DNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLL 570

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+   V P+++   T I        + KA  +L  +   G+ PN + YN LI GY   
Sbjct: 571 GQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRN 630

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             I  AI ++D M   G  P  V+Y ++M ++C                         G 
Sbjct: 631 GNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCH-----------------------AGL 667

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++EAK +  Q  +      VV YT ++ G C++G++D+A    ++M      PN ++YT 
Sbjct: 668 VDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTT 727

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            +   C +G + EA ++ +        P+ ++Y+ ++ G  +   L +A +   E+
Sbjct: 728 LMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEI 783



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 117/268 (43%), Gaps = 46/268 (17%)

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF---MQECLNKGCAVNV 479
           G L  A D    +  +   P+    N L+++L R G +    K    M++C  K    N 
Sbjct: 172 GSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDC--KTVTPNG 229

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLC--KKDPDTVTYTTIIDALSKNGRVEEATELM 537
            ++TS+I+  C+ G +++   +L D+     ++    V Y  ++DAL K+GRV+EA  L 
Sbjct: 230 YSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLK 289

Query: 538 MKMLSKGLVPTVVTYRTVIH---RYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCS 594
            +M    + P++VT+  +I+   R  + G V  LL+ +E  L         N++I+  C 
Sbjct: 290 GRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEG-LGITPNEVICNELIDWHCR 348

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            G+  EA ++  +++    K+ A T +++  +                           L
Sbjct: 349 KGHFTEAIRLFDEMVSKEMKSTAVTYNLIARA---------------------------L 381

Query: 655 CKKVSERLILEGKSEEADTLMLRFVERG 682
           CK        EG+ E A+ ++   +  G
Sbjct: 382 CK--------EGEMERAERILEEMLSTG 401


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 211/435 (48%), Gaps = 30/435 (6%)

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            L ++  +   P++ + N  +  L    + A A R +E     G      TY  L+ GYC
Sbjct: 83  ALRLVGSSPRPPDVPLANRLVRDLCRRGRPADAARVVE---ACGPEATAATYGALVDGYC 139

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               ++DA +++  MP    +    ++  ++  LC                       ++
Sbjct: 140 RAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALC-----------------------ER 176

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR+ +A  +++ M   GC PDVVTY  ++   C+     QA +++  M   GC+PN V+Y
Sbjct: 177 GRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTY 236

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              ++ +C  G   +ARE++N+       PN + Y+ V+ G     +  +A +++ EMV+
Sbjct: 237 NVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVR 296

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +   P    +N++I +LCR+G +     ++++    GC  NVV + ++I G C++G+++ 
Sbjct: 297 ENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDS 356

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           AL LL +M      PD VTY T++  L    R E+A ELM+KM     +P   T+ T+I 
Sbjct: 357 ALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIIS 416

Query: 558 RYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
            +CQ G +    ++ ++M  K      T Y+ +I  L   G +E+A ++L ++       
Sbjct: 417 FWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNT 476

Query: 616 DASTCHVLVESYLNK 630
           D     VL ES LNK
Sbjct: 477 DKMY-RVLTES-LNK 489



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 215/451 (47%), Gaps = 48/451 (10%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  +++   +  L + A+RV+  M          A + L+ A    G++ +A+ VL  M
Sbjct: 130 TYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGM 189

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
                AP+++  N  +     G    +AL  ++ M+  G  PN +TYN +I   C    +
Sbjct: 190 LCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDV 249

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----------- 311
             A +L++ +P +GC P+ V+Y TV+   C  +R  +  +++++MV ++           
Sbjct: 250 DQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVI 309

Query: 312 -NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            N    +G +++    + +MS+ GC  +VVTY AV++G C  G +D A ++L  M   GC
Sbjct: 310 INTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGC 369

Query: 371 KPNTVSYTAFLNGL-----------------------------------CHNGKSLEARE 395
           KP+ V+Y   L GL                                   C  G  L+A E
Sbjct: 370 KPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFE 429

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +     E+   PN+ TYS ++ GL + GK+ +A +++ EM  KGF  T     +L +SL 
Sbjct: 430 VFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFN-TDKMYRVLTESLN 488

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           +E K++   + + +  + G +   V + +++ G C+ G  + A+ +L DM  C   PD  
Sbjct: 489 KEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDES 548

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           TY  +I+ L   G  +EA EL+ ++ S+ ++
Sbjct: 549 TYIILIEGLFYEGYSKEARELLSRLCSRDVL 579



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 232/539 (43%), Gaps = 107/539 (19%)

Query: 160 AKRVLRLMARRG--------IE-CRPEA----FSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           A R++R + RRG        +E C PEA    +  L+  Y RAG L +A  V+  M    
Sbjct: 99  ANRLVRDLCRRGRPADAARVVEACGPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHV 158

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
            A +    N  IH L                                   C+  R+ DA+
Sbjct: 159 QASSAYAHNPLIHAL-----------------------------------CERGRVADAL 183

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKEL 326
            ++D M  +GC+PD V+Y  ++   CK +  ++                       A EL
Sbjct: 184 VVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQ-----------------------ALEL 220

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           ++ M   GC P+ VTY  +++  CR G++DQA+++L  +   GCKPNTV+Y   L G C 
Sbjct: 221 IDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCS 280

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
             + ++A E+++    E   PN  T +V+++ L R+G L +    + +M K G     V 
Sbjct: 281 IERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVT 340

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            N +I  +C +G +D A + +    + GC  ++V + ++++G C     E+A  L+  M 
Sbjct: 341 YNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMS 400

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
              + PD  T+ TII    + G + +A E+  +M  KG  P   TY T+I    + G++E
Sbjct: 401 QNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKME 460

Query: 567 DLLKLLEKMLSK------------------------------------QKCRTAYNQVIE 590
             L+LL +M +K                                          YN V+ 
Sbjct: 461 QALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLL 520

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
            LC  G  + A  +L  ++      D ST  +L+E    +G    A ++  R+ +R+++
Sbjct: 521 GLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVL 579



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 177/372 (47%), Gaps = 30/372 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVL 199
           + Y ++++ + +      A+ +L  +  RG  C+P   +Y  V   +    +  +A  +L
Sbjct: 234 VTYNVIIDAMCREGDVDQARELLNSLPSRG--CKPNTVNYNTVLKGFCSIERWVDADEIL 291

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +    PN    N  I+ L     L K   +LE+M   G T NV+TYN +I G C+ 
Sbjct: 292 DEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQ 351

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             +  A++L+  M   GC PD V+Y TV+  LC                          R
Sbjct: 352 GNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSAD-----------------------R 388

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            E+A+EL+ +MSQ   +PD  T+  +++ +C+ G + QA ++ +QM   GC PN+ +Y+ 
Sbjct: 389 WEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYST 448

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            + GL   GK  +A E++N    + +  + + Y V+   L +E K+ E   VV ++   G
Sbjct: 449 IIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSG 507

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  V  N ++  LCR GK D A   + + ++ GC  +   +  LI G   +G  +EA 
Sbjct: 508 ISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEAR 567

Query: 500 SLLDDMYLCKKD 511
            LL    LC +D
Sbjct: 568 ELLS--RLCSRD 577


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/356 (32%), Positives = 181/356 (50%), Gaps = 29/356 (8%)

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +  +LR      L     +V++Y+  I G C   +I +A+++  EM  KG +PD  +Y  
Sbjct: 72  IPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNI 131

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LCK+                        ++E    L+++M   G  P VVTYT ++
Sbjct: 132 LINGLCKD-----------------------AQLEMGVSLMDEMQARGFSPTVVTYTTLI 168

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA----REMINTSEE 402
           +GFC  G +D A  +L +M H G  PNTV+YTA + GLC  G+   A    +EM     E
Sbjct: 169 HGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNE 228

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               PN +TY+ ++HGL ++G      + + EM+  G FP       LI  LC++G    
Sbjct: 229 --CCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLE 286

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A   + E +  GC ++VV + SLI G C+ G+L+ A  +   M      PD  TYT++I 
Sbjct: 287 AAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQ 346

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            L   G ++EA  LM +M +KG+VP  VTY T+I+ + Q  R +  L+L+ +M S 
Sbjct: 347 GLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSN 402



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 167/331 (50%), Gaps = 18/331 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D I Y   +  L K      A  + R M  +G    P++F+Y  L+    +  +L   + 
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKG--SAPDSFTYNILINGLCKDAQLEMGVS 147

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           ++  MQ    +P ++   T IH      ++  A+  L+ M+  GITPN +TY  LI+G C
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLC 207

Query: 258 DLHRIKDAIKLIDEMPLKG--CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV------N 309
           D   ++ AI ++ EM L+G  C P+ V+Y  ++  LC++   +   + +++M+      N
Sbjct: 208 DCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPN 267

Query: 310 DSN---LFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
           ++    L H    +G   EA  L+N+M  +GC  DVV Y ++++G C++GELD A++M  
Sbjct: 268 NATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQI 327

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M   G  P+  +YT+ + GLC  G   EA  ++     +   PN++TY+ +++G  +  
Sbjct: 328 LMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQAD 387

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +   A  +V EM   G  P      +L +SL
Sbjct: 388 RTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 164/318 (51%), Gaps = 6/318 (1%)

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           DV++Y+  +NG C+ G++ +A ++ ++M   G  P++ +Y   +NGLC + +      ++
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +  +   ++P  +TY+ ++HG    G++  A D++ EM  +G  P  V    LIQ LC  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 458 GKMDGAKKFMQECLNKG--CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           G+++ A   ++E   +G  C  NVV +T LI G CQKG  E  +  LD+M +    P+  
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TYT +I  L + G   EA  L+ +M++ G    VV Y ++I   C++G + D  + ++ +
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGEL-DFAREMQIL 328

Query: 576 LSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           + ++        Y  +I+ LC  G L+EA  ++ ++       ++ T   L+  +     
Sbjct: 329 MVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADR 388

Query: 633 PLLAYKVACRMFNRNLIP 650
              A ++   M +  L+P
Sbjct: 389 TDHALQLVNEMKSNGLMP 406



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 143/285 (50%), Gaps = 5/285 (1%)

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           + I+YS  ++GL ++G+++EA ++ REM +KG  P     N+LI  LC++ +++     M
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            E   +G +  VV +T+LI GFC  G ++ A+ +LD+M      P+TVTYT +I  L   
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 528 GRVEEATELM--MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRT 583
           G VE A  ++  MK+      P VVTY  +IH  CQ G  E  ++ L++M+         
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            Y  +I  LC  G   EA  +L +++    + D    + L++     G    A ++   M
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
             + + PD+     + + L   G  +EA  LM     +G I P S
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKG-IVPNS 373



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 2/131 (1%)

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            +V++++  I G C+KG + EA+ +  +M      PD+ TY  +I+ L K+ ++E    L
Sbjct: 89  TDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSL 148

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCS 594
           M +M ++G  PTVVTY T+IH +C  GRV+  + +L++M  +        Y  +I+ LC 
Sbjct: 149 MDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCD 208

Query: 595 FGYLEEAGKIL 605
            G +E A  +L
Sbjct: 209 CGEVERAILVL 219


>gi|147789723|emb|CAN67400.1| hypothetical protein VITISV_025966 [Vitis vinifera]
          Length = 550

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 190/386 (49%), Gaps = 23/386 (5%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GKL NA  ++ +M +    P    C   I  L+      +A R L+ M ++G  P+++TY
Sbjct: 144 GKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIITY 203

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N L+ G C    +K AI+L+DEM L GC PD ++Y T++                     
Sbjct: 204 NMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTIL--------------------- 242

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                 D G  ++A        + GC   ++TYT ++   C+     QA ++L+ M   G
Sbjct: 243 --RCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEG 300

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
           C P+ V+Y + +N  C  GK  +   +I         PN +TY+ ++H L   G   E  
Sbjct: 301 CYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVD 360

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           +++  M      PT V  N+LI  LC+ G +D A  F  + ++  C  +++ + +L+   
Sbjct: 361 EILLIMNMTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAAL 420

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C++G ++EAL LL  +   +  P  +TY  +ID L+K G +E+A  L  +M+ +G  P  
Sbjct: 421 CKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMGLYGEMIERGFAPDD 480

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKM 575
           +T+RT+     ++  VED L +L++M
Sbjct: 481 ITHRTLFWGLFRLDLVEDALVILKEM 506



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 165/338 (48%), Gaps = 4/338 (1%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G++  A  L++ M++   IP   +   ++ G  ++   ++A ++L+ M   G  P+ ++
Sbjct: 143 KGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSGGIPDIIT 202

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   + GLC  G    A E+++        P+AITY+ ++  +   G   +A    ++ +
Sbjct: 203 YNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQL 262

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +KG     +   +LI+ +C+      A + +++   +GC  ++V + SL+   C++G  E
Sbjct: 263 RKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYE 322

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +   ++ ++      P+TVTY T++ +L  +G  +E  E+++ M      PTVVTY  +I
Sbjct: 323 DTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNMTSQPPTVVTYNILI 382

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +  C+ G ++  +   ++M+S   C      YN ++  LC  G ++EA  +L  +  T  
Sbjct: 383 NGLCKYGLLDRAINFFDQMVS-HNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRC 441

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
                T +++++    KG    A  +   M  R   PD
Sbjct: 442 SPGLITYNIVIDGLAKKGCMEKAMGLYGEMIERGFAPD 479



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 158/344 (45%), Gaps = 2/344 (0%)

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           T   ++   C  G+L  A +++  M      P   S    + GL     +  A  ++   
Sbjct: 132 TNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIM 191

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
                 P+ ITY++++ GL ++G L  A +++ EM   G  P  +  N +++ +   G  
Sbjct: 192 VMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGF 251

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
           D A  F ++ L KGC   ++ +T LI   C+     +A+ +L+DM +    PD VTY ++
Sbjct: 252 DQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSL 311

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE--DLLKLLEKMLSK 578
           ++   K G+ E+   ++  +LS G+ P  VTY T++H  C  G  +  D + L+  M S+
Sbjct: 312 VNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNMTSQ 371

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
                 YN +I  LC +G L+ A     +++      D  T + L+ +   +G+   A  
Sbjct: 372 PPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALH 431

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +   + +    P L     V + L  +G  E+A  L    +ERG
Sbjct: 432 LLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMGLYGEMIERG 475



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 147/330 (44%), Gaps = 27/330 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY---LMVAYSRAGKLRNAM 196
           D I Y M++  L K  L + A  +L  M+  G  C P+A +Y   L   +   G  +   
Sbjct: 199 DIITYNMLVGGLCKKGLLKTAIELLDEMSLSG--CPPDAITYNTILRCMFDHGGFDQAIG 256

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGN-KLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           +    ++K    P  LI  T +  LV  +    +A+  LE M + G  P+++TYN L+  
Sbjct: 257 FWKDQLRKGC--PAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNY 314

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---- 311
            C   + +D   +I  +   G  P+ V+Y T++  LC      EV +++  M   S    
Sbjct: 315 TCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNMTSQPPT 374

Query: 312 --------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   N     G ++ A    +QM    C+PD++TY  ++   C+ G +D+A  +L 
Sbjct: 375 VVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLH 434

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            +    C P  ++Y   ++GL   G   +A  +     E  + P+ IT+  +  GL R  
Sbjct: 435 SLNDTRCSPGLITYNIVIDGLAKKGCMEKAMGLYGEMIERGFAPDDITHRTLFWGLFRLD 494

Query: 424 KLSEACDVVREMVKK-------GFFPTPVE 446
            + +A  +++EM K+        F P P++
Sbjct: 495 LVEDALVILKEMNKRNQRIKNSAFRPDPLK 524


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 227/467 (48%), Gaps = 28/467 (5%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVA-PNLLICNTAIHVL 221
           VL +  ++GI      F+ L+       K+++A+++   + +  +  PN ++  T ++ L
Sbjct: 129 VLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGL 188

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
                  KA   L  M+     PN  TY  +I  +C    +  A  L++EM  K   PD 
Sbjct: 189 CKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDI 248

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
            +Y T++  LCK  + + VR L  +M+                        +   P+V T
Sbjct: 249 FTYSTLIDALCKLSQWENVRTLFLEMI-----------------------HLNIYPNVCT 285

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           + +V++G C+ G+++ A+++++ M   G  P+ ++Y   ++G    G+   ARE+ ++  
Sbjct: 286 FNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMI 345

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
            +   P+ I+Y+++++G  R+ K+ EA  V RE+ +KG  P+ V  N+L+  L   G+  
Sbjct: 346 NKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTK 405

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A+ F  E L+ G   ++    +L+ G+ + G +EEA+S    +   ++D +   YT +I
Sbjct: 406 SAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVI 465

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           D L KNG++++A     K+   GL P V+TY  +I  YCQ G +++   +L KM     C
Sbjct: 466 DGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM-EDNGC 524

Query: 582 ---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
                 YN ++        + E    L ++   +   +A+T  +L++
Sbjct: 525 LADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 179/379 (47%), Gaps = 14/379 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + ++Y  ++  L K    Q A  +LRLM +   +     ++ ++ A+ + G L  A  +L
Sbjct: 177 NEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLL 236

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKA-LRFLERMQLAGITPNVLTYNCLIKGYCD 258
           + M++ ++ P++   +T I  L   ++       FLE + L  I PNV T+N +I G C 
Sbjct: 237 NEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHL-NIYPNVCTFNSVIDGLCK 295

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
             +++DA +++  M  KG  PD ++Y  ++       ++   R++ + M+N S       
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIIS 355

Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                N +  Q +I+EA ++  ++SQ G  P +VT   +++G   +G    A+    +M 
Sbjct: 356 YNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEML 415

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  P+  ++   L G   NG   EA    +  E      N   Y+ V+ GL + GKL 
Sbjct: 416 SAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLD 475

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A     ++   G  P  +    +I   C+EG +D AK  +++  + GC  +   +  ++
Sbjct: 476 KAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIV 535

Query: 487 RGFCQKGDLEEALSLLDDM 505
           RGF +   + E  + L+++
Sbjct: 536 RGFLRSNKVSEMKAFLEEI 554



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 147/313 (46%), Gaps = 3/313 (0%)

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT-SE 401
           + VVN  C +   D    +L   +  G   N V++T  + GL    K  +A  +      
Sbjct: 111 SIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVR 170

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           E    PN + Y  VM+GL ++G   +A D++R M +    P      ++I + C++G +D
Sbjct: 171 ENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLD 230

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
           GA   + E   K    ++  +++LI   C+    E   +L  +M      P+  T+ ++I
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--Q 579
           D L K G+VE+A E+M  M+ KG+ P V+TY  +I  Y   G+V+   ++ + M++K  +
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350

Query: 580 KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
               +YN +I        ++EA ++  ++ +   K    TC+VL+      G    A   
Sbjct: 351 PDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNF 410

Query: 640 ACRMFNRNLIPDL 652
              M +   IPDL
Sbjct: 411 FDEMLSAGHIPDL 423



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 160/345 (46%), Gaps = 16/345 (4%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
            Y ++++   K  +  GA  +L  M ++ I   P+ F+Y  L+ A  +  +  N   +  
Sbjct: 215 TYTIVIDAFCKDGMLDGATSLLNEMKQKSIP--PDIFTYSTLIDALCKLSQWENVRTLFL 272

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M    + PN+   N+ I  L    K+  A   +  M   G+ P+V+TYN +I GY    
Sbjct: 273 EMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRG 332

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDS 311
           ++  A ++ D M  K   PD +SY  ++    ++K+I E          + L   +V  +
Sbjct: 333 QVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCN 392

Query: 312 NLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
            L H   + GR + A+   ++M   G IPD+ T+  ++ G+ + G +++A     ++   
Sbjct: 393 VLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
               N   YTA ++GLC NGK  +A             P+ ITY+ ++ G  +EG L EA
Sbjct: 453 REDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            D++R+M   G        N++++   R  K+   K F++E   K
Sbjct: 513 KDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGK 557



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 152/330 (46%), Gaps = 8/330 (2%)

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            V N F  V  LD A  + +QM      P+  S++  L  + H         +     + 
Sbjct: 42  GVSNEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKL 101

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
               +    S+V++      +      V+    KKG     V    LI+ L  E K+  A
Sbjct: 102 RIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDA 161

Query: 464 KKFMQECLNKG-CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
               ++ + +  C  N V + +++ G C+KG  ++A  LL  M      P+T TYT +ID
Sbjct: 162 VHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVID 221

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQK 580
           A  K+G ++ AT L+ +M  K + P + TY T+I   C++ + E++  L  +M  L+   
Sbjct: 222 AFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYP 281

Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
               +N VI+ LC  G +E+A +I+  ++      D  T +++++ Y  +G    A ++ 
Sbjct: 282 NVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIF 341

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
             M N+++ PD+     +S  +++ G + +
Sbjct: 342 DSMINKSIEPDI-----ISYNILINGYARQ 366



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 121/263 (46%), Gaps = 7/263 (2%)

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L +A  + R+MV+    P+    + L++++             +E       V+    + 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDP-DTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           ++   C     +   S+L  ++  K  P + VT+TT+I  L    +V++A  L  K++ +
Sbjct: 113 VVNSCCLMHRTDLGFSVLA-IHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRE 171

Query: 544 GLV-PTVVTYRTVIHRYCQVGRVE---DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLE 599
            +  P  V Y TV++  C+ G  +   DLL+L+E+  +K   RT Y  VI+  C  G L+
Sbjct: 172 NICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRT-YTIVIDAFCKDGMLD 230

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
            A  +L ++ + +   D  T   L+++            +   M + N+ P++     V 
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290

Query: 660 ERLILEGKSEEADTLMLRFVERG 682
           + L  EGK E+A+ +M   +E+G
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKG 313


>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Glycine max]
          Length = 729

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 251/530 (47%), Gaps = 43/530 (8%)

Query: 93  PKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILS 152
           P   G L +LL ++    +   LR   D   AL+FF W  +Q  + H P  Y++MLEIL 
Sbjct: 63  PFSNGLLSSLLITISKTTVLRTLRLIKDPSKALRFFKWT-QQKGFSHTPESYFIMLEILG 121

Query: 153 KTKLCQGAKRVLRLMARRG---IECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAP 209
           + +    A+  L  + +     ++     F+ L+ +Y+ AG  + +M +   M+  AV+P
Sbjct: 122 RERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSP 181

Query: 210 NLLICNTAIHVLVVGNK--LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
           +++  N+ + +L+   +  +AK + + E +   G++P+  TYN LI+G+C    + +  +
Sbjct: 182 SVVTFNSLMSILLKRGRTNMAKEV-YDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFR 240

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELV 327
              EM    C  D V+Y T++  LC+                        G++  A+ LV
Sbjct: 241 FFREMESFNCDADVVTYNTLVDGLCR-----------------------AGKVRIARNLV 277

Query: 328 NQMSQM--GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           N M +   G  P+VVTYT ++ G+C   E+++A  +L++M   G KPN ++Y   + GLC
Sbjct: 278 NGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLC 337

Query: 386 HNGKSLEAREMINTSEEE-WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
              K  + ++++   + +  ++P+  T++ ++H     G L EA  V   M K       
Sbjct: 338 EAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADS 397

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNK-------GCAVNVVNFTSLIRGFCQKGDLEE 497
              + LI+SLC++G  D A++   E   K       G      ++  +    C+ G  ++
Sbjct: 398 ASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKK 457

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A  ++  + + +   D  +YTT+I    K G  E   EL+M ML +  +P +  Y  +I 
Sbjct: 458 AERVIRQL-MKRGTQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLID 516

Query: 558 RYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
            + Q  +     + LEKML  S Q   + ++ V+  L   G   E+  ++
Sbjct: 517 GFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHESSCVI 566



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 163/327 (49%), Gaps = 17/327 (5%)

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           + + +      G   E+ ++  T +    +P+ +T++ +M  L + G+ + A +V  EM+
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEML 210

Query: 437 KK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              G  P     N+LI+  C+   +D   +F +E  +  C  +VV + +L+ G C+ G +
Sbjct: 211 GTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKV 270

Query: 496 EEALSLLDDMYLCKK----DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
             A +L++ M   KK    +P+ VTYTT+I        VEEA  ++ +M S+GL P ++T
Sbjct: 271 RIARNLVNGM--GKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMIT 328

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKV 608
           Y T++   C+  +++ +  +LE+M S          +N +I   C  G L+EA K+   +
Sbjct: 329 YNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESM 388

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI-------PDLKLCKKVSER 661
            +    AD+++   L+ S   KG   +A ++   +F + ++       P       + E 
Sbjct: 389 KKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFES 448

Query: 662 LILEGKSEEADTLMLRFVERGHIQPKS 688
           L   GK+++A+ ++ + ++RG   P+S
Sbjct: 449 LCEHGKTKKAERVIRQLMKRGTQDPQS 475



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 10/253 (3%)

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM- 467
            I+ + V+  LR     S+A    +   +KGF  TP    ++++ L RE  ++ A+ F+ 
Sbjct: 75  TISKTTVLRTLRLIKDPSKALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLF 134

Query: 468 -QECLNKGCA-VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             E  +KG   +    F SLIR + + G  +E++ L   M      P  VT+ +++  L 
Sbjct: 135 SIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILL 194

Query: 526 KNGRVEEATELMMKML-SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT- 583
           K GR   A E+  +ML + G+ P   TY  +I  +C+   V++  +   +M S   C   
Sbjct: 195 KRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFN-CDAD 253

Query: 584 --AYNQVIENLCSFGYLEEAGKILGKVLRTAS--KADASTCHVLVESYLNKGIPLLAYKV 639
              YN +++ LC  G +  A  ++  + +       +  T   L+  Y  K     A  V
Sbjct: 254 VVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVV 313

Query: 640 ACRMFNRNLIPDL 652
              M +R L P++
Sbjct: 314 LEEMTSRGLKPNM 326



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/387 (22%), Positives = 142/387 (36%), Gaps = 86/387 (22%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQK-AAVAPNLLICNTAIHVL 221
           VL  M  RG++     ++ L+     A KL     VL  M+     +P+    NT IH+ 
Sbjct: 313 VLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLH 372

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK------ 275
                L +AL+  E M+   I  +  +Y+ LI+  C       A +L DE+  K      
Sbjct: 373 CCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSK 432

Query: 276 -GCSPDKVSYYTVMGYLCKEKRIKE----VRDLMEKMVNDSNLFHD-------QGRIEEA 323
            G  P   SY  +   LC+  + K+    +R LM++   D   +         +G  E  
Sbjct: 433 FGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGAYESG 492

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
            EL+  M +   +PD+  Y  +++GF +  +   AK+ L++M     +P T ++ + L  
Sbjct: 493 YELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAK 552

Query: 384 LCHNGKSLEA------------REMINTSEEE--------------------WWTPNAIT 411
           L   G + E+            R+ IN S E                     +     + 
Sbjct: 553 LLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGYYVK 612

Query: 412 YSVVMHGLRREGKLSEAC-----------------------------------DVVREMV 436
              V   L + GKLSEAC                                    +  E+V
Sbjct: 613 IEEVAQFLLKRGKLSEACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFSLCYELV 672

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGA 463
           + G       ++ LI +L   GK + A
Sbjct: 673 ENGLHQELTCLDDLIAALEEGGKREEA 699


>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
 gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 216/477 (45%), Gaps = 68/477 (14%)

Query: 104 RSLKPRQICAVLRSQADERVALQFFYWADRQWR--YRHDPIVYYMMLEILSKTKLCQGAK 161
           + + P ++  +LR++ D R A   F  A  ++   +RHD   + +M+  L      + A+
Sbjct: 11  KQITPSKVEQLLRAERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRPAE 70

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
            +L  M         E F  +   Y R     +A+ V   M      P      +   +L
Sbjct: 71  EMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAIL 130

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC-DLHRIKDAIKLIDEMPLKGCSPD 280
           V  N+L  A+ F + M+  G+  +V++ N LIK  C +   I  A ++  EMP +GC PD
Sbjct: 131 VEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPD 190

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
             +Y T++  LCK                        G+  EAKEL  +M   GC P VV
Sbjct: 191 SYTYGTLINGLCK-----------------------LGKTFEAKELFKEMDTKGCSPSVV 227

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TY+ +++G C+ G +D+A  +  +M     +PN  +Y++ ++GLC NG SLEA E++   
Sbjct: 228 TYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMM 287

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP------------------ 442
             +   PN +TYS +++GL +EGKL+EA + +  M  +G  P                  
Sbjct: 288 VRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKF 347

Query: 443 ---------------TPVEI---------NLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
                          +P  +         N+++Q LC  G ++ + +       +G +++
Sbjct: 348 QEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISID 407

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
              F SL++ FC+KGDL +A  + D+M L    PD   ++ ++       +V EA E
Sbjct: 408 AGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFE 464



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 188/381 (49%), Gaps = 24/381 (6%)

Query: 218 IHVLVVGNKLAKALRFLERM--QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
           I  LV  N+   A   L RM  +   IT  +    C  +GY  +H   DAI++  +M   
Sbjct: 57  ISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSIC--RGYGRVHMPLDAIRVFHKMNDF 114

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-------------VNDSNLFHDQGRIEE 322
           GC P   SY +V   L +E ++K      + M             V    L  + G I+ 
Sbjct: 115 GCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDA 174

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A E+  +M + GC PD  TY  ++NG C++G+  +AK++ ++M   GC P+ V+Y+  ++
Sbjct: 175 AFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMH 234

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC  G   EA  + +  +++   PN  TYS +M GL + G   EA +++  MV+K   P
Sbjct: 235 GLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKP 294

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V  + LI  LC+EGK+  A + +     +G   +   +  +I GFC     +EA + L
Sbjct: 295 NMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYL 354

Query: 503 DDMYLCKKDPDTVTYT-------TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           D+M L +  P+ VT++        ++  L  NG +  + +L + M ++G+     T+ ++
Sbjct: 355 DEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSL 414

Query: 556 IHRYCQVGRVEDLLKLLEKML 576
           +  +C+ G +    ++ ++M+
Sbjct: 415 VKCFCKKGDLHKAARIFDEMV 435



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 166/347 (47%), Gaps = 13/347 (3%)

Query: 318 GRIE---EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
           GR+    +A  + ++M+  GC P   +Y +V        +L  A    + M   G + + 
Sbjct: 96  GRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSV 155

Query: 375 VSYTAFLNGLCHNGKSLEAR-EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
           VS    +  LC N  +++A  E+     +    P++ TY  +++GL + GK  EA ++ +
Sbjct: 156 VSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFK 215

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM  KG  P+ V  + L+  LC+ G +D A     +   K    NV  ++SL+ G C+ G
Sbjct: 216 EMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNG 275

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
              EA+ LL+ M   +  P+ VTY+T+I+ L K G++ EA E + +M  +GL P    Y 
Sbjct: 276 GSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYG 335

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAY-------NQVIENLCSFGYLEEAGKI 604
            +I+ +C + + ++    L++M+  Q    R  +       N V++ LC+ G L  + ++
Sbjct: 336 KIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQL 395

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              +       DA T   LV+ +  KG    A ++   M     +PD
Sbjct: 396 YIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPD 442



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 23/279 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  ++  L K      AK + + M  +G  C P   +Y  LM    +AG +  AM 
Sbjct: 190 DSYTYGTLINGLCKLGKTFEAKELFKEMDTKG--CSPSVVTYSCLMHGLCQAGNVDEAMG 247

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M+K A+ PN+   ++ +  L       +A+  LE M      PN++TY+ LI G C
Sbjct: 248 LFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLC 307

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------- 307
              ++ +A++ +D M L+G  PD   Y  ++   C  ++ +E    +++M          
Sbjct: 308 KEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRV 367

Query: 308 -----VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                V  +N+        G +  + +L   M   G   D  T+ ++V  FC+ G+L +A
Sbjct: 368 TWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKA 427

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
            ++  +M   GC P+   ++A + G     K  EA E I
Sbjct: 428 ARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFESI 466


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 248/556 (44%), Gaps = 43/556 (7%)

Query: 93  PKLEGELRNLLRSLKPRQICAVLRSQADERVA-LQFFYWADRQWRYRHDPIVYYMMLEIL 151
           P L   L  L R L P  +   L   A    + ++ F ++    R R   +    ++ IL
Sbjct: 55  PSLFPCLSLLSRRLTPHSVADALLCDALPPASRIRLFLFSALTPRLRSPLLHSRAVVPIL 114

Query: 152 SKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ-KAAVAPN 210
             T         +      G++    AF  L+ A++ AG+   A+   S M+ +    P 
Sbjct: 115 LATDADAAMYDAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPT 174

Query: 211 LLICNTAIHVLVV-GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
             + N  + VLV  G  +  AL    RM  AG  PN  TYN LI G C      DA+KL 
Sbjct: 175 TFVYNAVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLF 234

Query: 270 DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQ 329
           DEM  +G +P+  ++  ++  +C                       + G+++EA+ L++ 
Sbjct: 235 DEMISRGITPNVKTHTILLSSMC-----------------------NAGQLKEAENLLHS 271

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV-SYTAFLNGLCHNG 388
           M   GC PD VTY A ++G C+ G +D+A + L+ + H G     +  Y+  ++GL   G
Sbjct: 272 MEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAG 331

Query: 389 KSLEARE-MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           +  E  +  +   E+   +P+ + Y++++ G    G+ ++A     EM +KGF P     
Sbjct: 332 RYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCY 391

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N L+++LC  G +DGA+  M E +     +++  +T++I G C++  ++EA+ + D M  
Sbjct: 392 NTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVE 451

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKM-------------LSKGLVPTVVTYRT 554
               P  +TY  +ID L +  R+EEA  L  KM             L    V    T + 
Sbjct: 452 VGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQK 511

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           ++   CQ G+V    KLL  ++          YN ++  LC    L+ A ++  ++    
Sbjct: 512 LVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKG 571

Query: 613 SKADASTCHVLVESYL 628
              D  T   L++S L
Sbjct: 572 FPLDEITYGTLIDSLL 587



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 154/667 (23%), Positives = 277/667 (41%), Gaps = 82/667 (12%)

Query: 87  LRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYY- 145
           L SA +P+L   L      L  R +  +L   A +  A  +   AD Q      P   + 
Sbjct: 92  LFSALTPRLRSPL------LHSRAVVPIL--LATDADAAMYDAIADAQAAGLQPPTAAFE 143

Query: 146 -MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY---LMVAYSRAGKLRNAMYVLSM 201
            ++    S  +  +  +   R+    G  CRP  F Y   L V  +  G +  A+ + + 
Sbjct: 144 ALIFAHASAGRHHEAVEAFSRMEGEFG--CRPTTFVYNAVLRVLVASGGAVPLALALYNR 201

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M  A   PN    N  IH L        AL+  + M   GITPNV T+  L+   C+  +
Sbjct: 202 MVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQ 261

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF------- 314
           +K+A  L+  M  KGC PD+V+Y   +  LCK  R+ E  + +E + +            
Sbjct: 262 LKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYS 321

Query: 315 ------------------------------------------HDQGRIEEAKELVNQMSQ 332
                                                      + GR  +A    ++M +
Sbjct: 322 CLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKE 381

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G  PD   Y  ++   C  G+LD A+ ++ +M  +    +  +YT  + GLC      E
Sbjct: 382 KGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDE 441

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV------- 445
           A ++ +   E    P+ +TY+V++ GL R  +L EA  +  +M + G  P+         
Sbjct: 442 AMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKM-EVGNNPSLFLRLTLGA 500

Query: 446 -------EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
                   +  L++S+C+ G++  A K ++  ++ G   +VV + +L+ G C+  +L+ A
Sbjct: 501 NQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGA 560

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L L  ++ +     D +TY T+ID+L +  R  +A  L   +L  G  P++  Y +++  
Sbjct: 561 LRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRS 620

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENL---CSFGYLEEAGKILGKVLRTASKA 615
            C++ ++   + L    L ++    A ++VI +       G L EA + L K+ +     
Sbjct: 621 LCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSV 680

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           ++    + +   +  G    A K+   +    +      C  +S+ L LEG    A  +M
Sbjct: 681 NSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVM 740

Query: 676 LRFVERG 682
           L  +++G
Sbjct: 741 LYTLKKG 747



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/433 (20%), Positives = 161/433 (37%), Gaps = 98/433 (22%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ ++   + AG+  +A      M++    P+    NT +  L     L  A   +  M 
Sbjct: 356 YTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMV 415

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
              +  ++ TY  +I G C    + +A+++ D M   GC P  ++Y  ++  L +  R++
Sbjct: 416 RNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLE 475

Query: 299 EVRDLMEKM--VNDSNLFH-----------------------DQGRIEEAKELVNQMSQM 333
           E R L  KM   N+ +LF                          G++ +A +L+  +   
Sbjct: 476 EARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDS 535

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKML------------------------------- 362
           G +PDVVTY  ++NG C+V  LD A ++                                
Sbjct: 536 GVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDA 595

Query: 363 ----QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA------------------------- 393
               Q + H G  P+   Y + +  LC   K  +A                         
Sbjct: 596 LTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSAR 655

Query: 394 ------------REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
                       RE+I   ++E+ + N+  Y++ + GL + G++ +A  +   + + G  
Sbjct: 656 KKFEEGCLHEAVRELIKI-DQEYGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGID 714

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
            TP     L + LC EG +  A   M   L KG  +       L+   C     ++A +L
Sbjct: 715 ITPACCVHLSKYLCLEGNLGAAVDVMLYTLKKGFTMRRYVGNRLLCSLCIHHRRKDAQAL 774

Query: 502 LDDMYLCKKDPDT 514
              M+L   D D 
Sbjct: 775 AWRMHLVGYDMDA 787


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 247/497 (49%), Gaps = 21/497 (4%)

Query: 160 AKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A ++L  +  RG  C P   +F+ ++    +  K+  A+ +  +M+K A  PN+   N  
Sbjct: 335 AYKLLERLRERG--CIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNII 391

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I +L +  ++ +A +  + M+LAG+ PN+L+ N ++   C  +++++A ++ +    +GC
Sbjct: 392 IDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGC 451

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNL---------FHDQGRIEEAKE 325
           +P+ V+Y +++  L K+ +I +   L EKM++   D+N          F   GR E+  +
Sbjct: 452 NPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHK 511

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           +  +M + G  PD+      ++   + GE+++ + + + M   G  P+  SY+  ++GL 
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLT 571

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G++ E   +     ++ +  +A  Y+ V+ GL + GK+ +A +V+ EM  K   PT  
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVA 631

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               ++  L +  ++D A    +E  +KG  +NV+ ++SLI GF + G ++EA  +L++M
Sbjct: 632 TYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEM 691

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P+  T+ +++DAL K   ++EA      M      P   TY  +I+  C+V + 
Sbjct: 692 MKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 751

Query: 566 EDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
                  ++M  KQ        Y  +I  L   G + +A  +  +        D+++ + 
Sbjct: 752 NKAFVFWQEM-QKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNA 810

Query: 623 LVESYLNKGIPLLAYKV 639
           L+E   N   P+ AY+V
Sbjct: 811 LIEGMSNANRPMEAYQV 827



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 161/687 (23%), Positives = 283/687 (41%), Gaps = 95/687 (13%)

Query: 80  EVCRLIELRSAWSPKLEGELRNLLRSLKPRQ---ICAVLRSQADERVALQFFYWADRQWR 136
           E+ RL+    AW+P L G + + L S        +  VLRS  +  +A  FF  A     
Sbjct: 44  ELLRLLFAAPAWTPDLAGAVSSTLSSAPAPAHDVVVYVLRSLKNPSLAAPFFLLASASSS 103

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
               P  Y  +L  LS        ++VL  M+  G      A + L+    R+ +L +A 
Sbjct: 104 QPLPPDAYNAVLPFLSHD--LAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAF 161

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            V+  M+     P        I  L    +  +AL  L +MQ  G   +V  +  L++  
Sbjct: 162 RVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRAL 221

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI----KEVRDLMEKMVNDSN 312
               +++ A+ L+DE+      PD V Y   +    K   +    K   +L    +   +
Sbjct: 222 AREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDD 281

Query: 313 LFHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           + +          GR+ EA+EL  QM     +P    Y  ++ G+      D A K+L++
Sbjct: 282 VSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLER 341

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           +   GC P+ VS+ + L  L    K  EA  + +  +++   PN  TY++++  L   G+
Sbjct: 342 LRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKD-AKPNISTYNIIIDMLCMAGR 400

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           ++EA  +  EM   G FP  + +N+++  LC+  +++ A +  +    +GC  N V + S
Sbjct: 401 VNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCS 460

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII----------------------- 521
           LI G  +KG +++A  L + M     D + + YT++I                       
Sbjct: 461 LIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRG 520

Query: 522 ------------DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
                       D + K G VE+   +   M S G +P V +Y  +IH   + G+  +  
Sbjct: 521 GRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETS 580

Query: 570 KLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKIL---------------GKVLRT 611
            + + M S+Q       AYN V++ LC  G +++A ++L               G ++  
Sbjct: 581 NIFQAM-SQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDG 639

Query: 612 ASKAD-ASTCHVLVESYLNKGIPL-------------------LAYKVACRMFNRNLIPD 651
            +K D     ++L E   +KGI L                    AY +   M  + L P+
Sbjct: 640 LAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 699

Query: 652 LKLCKKVSERLILEGKSEEADTLMLRF 678
           +     + + L+   K+EE D  ++ F
Sbjct: 700 VYTWNSLMDALV---KTEEIDEALICF 723



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 198/445 (44%), Gaps = 26/445 (5%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           +A +L  A  +     +    PN +   + I  L    K+  A R  E+M  AG   N +
Sbjct: 432 KANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPI 491

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            Y  LI+ +    R +D  K+  EM  +G  PD     T M  + K              
Sbjct: 492 IYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFK-------------- 537

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                     G +E+ + +   M   G +PDV +Y+ +++G  + G+  +   + Q M  
Sbjct: 538 ---------AGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQ 588

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G   +  +Y A ++GLC +GK  +A E++   + +   P   TY  ++ GL +  +L E
Sbjct: 589 QGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDE 648

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +  E   KG     +  + LI    + G++D A   ++E + KG   NV  + SL+ 
Sbjct: 649 AYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMD 708

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
              +  +++EAL     M   K  P+T TY+ +I+ L +  +  +A     +M  +GL+P
Sbjct: 709 ALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIP 768

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKIL 605
            VVTY T+I    +VG + D   L E+  +        ++N +IE + +     EA ++ 
Sbjct: 769 NVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVF 828

Query: 606 GKVLRTASKADASTCHVLVESYLNK 630
            +      + +  TC  L+++ LNK
Sbjct: 829 EETRLRGCRLNVKTCISLLDA-LNK 852



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 186/407 (45%), Gaps = 12/407 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y  +++ L K      A R+   M   G +  P  ++ L+  +   G+  +   + 
Sbjct: 454 NSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIY 513

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +    P+L + NT +  +    ++ K     E M+  G  P+V +Y+ LI G    
Sbjct: 514 KEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKA 573

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFH 315
            + ++   +   M  +G + D  +Y  V+  LCK  ++ +  +++E+M    V+ +   +
Sbjct: 574 GQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATY 633

Query: 316 DQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                      R++EA  L  +    G   +V+ Y+++++GF +VG +D+A  +L++M  
Sbjct: 634 GSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMK 693

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN  ++ + ++ L    +  EA     + +E   +PN  TYS++++GL R  K ++
Sbjct: 694 KGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNK 753

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A    +EM K+G  P  V    +I  L + G +  A    +     G   +  +F +LI 
Sbjct: 754 AFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIE 813

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           G        EA  + ++  L     +  T  +++DAL+K   +E+A 
Sbjct: 814 GMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAA 860



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 135/277 (48%), Gaps = 12/277 (4%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           + + +  D   Y +++  L+K    +    + + M+++G      A++ ++    ++GK+
Sbjct: 552 KSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKV 611

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A  VL  M+   V P +    + +  L   ++L +A    E  +  GI  NV+ Y+ L
Sbjct: 612 DKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSL 671

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----- 307
           I G+  + RI +A  +++EM  KG +P+  ++ ++M  L K + I E     + M     
Sbjct: 672 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKC 731

Query: 308 ----VNDSNLFHDQGRIEE---AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                  S L +   R+++   A     +M + G IP+VVTYT +++G  +VG +  A  
Sbjct: 732 SPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYS 791

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           + ++   +G  P++ S+ A + G+ +  + +EA ++ 
Sbjct: 792 LFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVF 828


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/567 (25%), Positives = 255/567 (44%), Gaps = 50/567 (8%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +L    K    + A  ++  M  +GIE     ++ L+    +  +      +L  
Sbjct: 11  VTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKK 70

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+K  +APN    NT I+ L+   K+  A R    M +  ++PN +TYN LI G+CD   
Sbjct: 71  MRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGN 130

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK-----MVNDSNLFH- 315
            + A++L+D M  KG  PD+V+Y  ++  L K  +    + LME+     MV     +  
Sbjct: 131 FEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTA 190

Query: 316 ------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                   G ++E+ +L++ M + G  PD++T++ ++NGFC+ G++  AK+++ +M+  G
Sbjct: 191 MIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAG 250

Query: 370 CKPNTVSYT--------------AFLN---------------------GLCHNGKSLEAR 394
             PN V Y               AF N                      LC  G+  EA 
Sbjct: 251 LAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAE 310

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           + +         PN+IT+  +++G    G   +A  +  EM+K G  P+      L++ L
Sbjct: 311 DFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGL 370

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G +  AKK + +  +   AV+   + +++   C++G L +A++L  +M      PD+
Sbjct: 371 CKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDS 430

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKG-LVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            TY  I+  LS+ G++  A     K L++G L P  V Y ++     +VG+      + E
Sbjct: 431 HTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYE 490

Query: 574 KMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +M  K       A N V++     G +E+  K+  K+   +     +T ++L+  Y  K 
Sbjct: 491 EMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKK 550

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKV 658
             L   K    M    + PD   C  +
Sbjct: 551 DLLKCSKFYNIMTRMGISPDKLTCHSI 577



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 152/649 (23%), Positives = 267/649 (41%), Gaps = 121/649 (18%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  M++ L K  L   + ++L +M + G       FS L+  + +AGK++NA  V+  M
Sbjct: 187 AYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKM 246

Query: 203 QKAAVAPNLLI-----------------------------------CNTAIHVLVVGNKL 227
            KA +APN +I                                   CN  I  L    ++
Sbjct: 247 FKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRV 306

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           A+A  F+  M    + PN +T++C+I GY  L     A  + DEM   G  P   +Y ++
Sbjct: 307 AEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSL 366

Query: 288 MGYLCKEKRIKEVRDLMEKMVN-----DSNLFHD-------QGRIEEAKELVNQMSQMGC 335
           +  LCK   ++E + L+ K+ +     D+N+++        +G++ +A  L  +M Q   
Sbjct: 367 LKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNV 426

Query: 336 IPDV------------------------------------VTYTAVVNGFCRVGELDQAK 359
           +PD                                     V YT++ +G  +VG+ + A 
Sbjct: 427 LPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAAS 486

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            + ++M H G  P+T++  A L+G    GK  +  ++    +    TP+  TY++++HG 
Sbjct: 487 YIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGY 546

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            ++  L +       M + G  P  +  + +I  LC+ G +D   K +++ + +   V+ 
Sbjct: 547 SKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQ 606

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           +    LI   C+   + +A  LL+   L    PD  TY  I   L++   + E+  L+  
Sbjct: 607 LTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHD 666

Query: 540 MLSKGLVPTVVTYRTVIHRYC-----------------------------------QVGR 564
           ML +G+ PT   Y ++I+  C                                   Q G+
Sbjct: 667 MLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGK 726

Query: 565 VEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           VE+ + +L+ ML K+   T   +  ++  LC    L EA K+ GK+     K D    +V
Sbjct: 727 VEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNV 786

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPD-LKLCKKVSERLILEGKSEE 670
           L+      G  L A+ +   M  R L P+    C  +      EG+ EE
Sbjct: 787 LISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNEGEVEE 835



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 208/464 (44%), Gaps = 14/464 (3%)

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M+ +G  P ++TYN ++   C   R K A  LID M  KG   D  +Y  ++  LCK  R
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 297 IKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
             +   L++KM                N    + +I  A  + N+M  +   P+ VTY  
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++G C  G  +QA ++L  M   G +P+ V+Y A L+GL    K   A+ ++       
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
                  Y+ ++ GL + G L E+  ++  M K G  P  +  ++LI   C+ GK+  AK
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           + + +    G A N V + +LI   C+KGD+ EA      M     D D      +I +L
Sbjct: 241 EVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSL 300

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT- 583
            + GRV EA + M  M +  L P  +T+  +I+ Y  +G       + ++M+    C + 
Sbjct: 301 CRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSH 360

Query: 584 -AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             Y  +++ LC  G L EA K+L K+    +  D +  + ++     +G    A  +   
Sbjct: 361 FTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGE 420

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           M   N++PD      +   L  +GK   A     + + RG + P
Sbjct: 421 MVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSP 464



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 140/569 (24%), Positives = 254/569 (44%), Gaps = 47/569 (8%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D + Y  +L  LSK      AK ++  +   G+     A++ ++    + G L  ++ 
Sbjct: 147 RPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQ 206

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L MM K   +P+++  +  I+      K+  A   + +M  AG+ PN + Y  LI   C
Sbjct: 207 LLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSC 266

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               I +A +    M   G   D      ++  LC+                        
Sbjct: 267 KKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCR-----------------------A 303

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR+ EA++ +  MS +   P+ +T+  ++NG+  +G+  +A  M  +M   G  P+  +Y
Sbjct: 304 GRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTY 363

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
            + L GLC  G   EA++++          +   Y+ ++    + GKLS+A  +  EMV+
Sbjct: 364 GSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQ 423

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC-AVNVVNFTSLIRGFCQKGDLE 496
               P      +++  L R+GKM  A  F ++ L +G  + N V +TSL  G  + G   
Sbjct: 424 FNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSN 483

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            A  + ++M     +PDT+    ++D  S+ G++E+  +L +KM S  L P++ TY  ++
Sbjct: 484 AASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILL 543

Query: 557 HRYCQVGRVEDLLK------LLEKM-LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           H Y    + +DLLK      ++ +M +S  K     + +I  LC  G L+   K+L K++
Sbjct: 544 HGY---SKKKDLLKCSKFYNIMTRMGISPDKLTC--HSIILGLCKSGMLDVGFKMLKKMI 598

Query: 610 RTASKADASTCHVLVESY-----LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
              +  D  T ++L+ +      + K   LL  K         +IPD+     +   L  
Sbjct: 599 MEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLL-----GIIPDVNTYNAIFTGLNR 653

Query: 665 EGKSEEADTLMLRFVERGHIQPKSEEHLQ 693
                E+  L+   +ERG I P S +++ 
Sbjct: 654 ASALRESHLLLHDMLERG-ITPTSTQYIS 681



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 211/467 (45%), Gaps = 15/467 (3%)

Query: 124 ALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           AL+ F   D   +  H P    Y  +L+ L K    + AK++L  +           ++ 
Sbjct: 341 ALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNT 400

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           ++    + GKL +A+ +   M +  V P+       +  L    K+  AL F E+    G
Sbjct: 401 ILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARG 460

Query: 242 -ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
            ++PN + Y  L  G   + +   A  + +EM  KG +PD ++   V+    +  ++++V
Sbjct: 461 TLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKV 520

Query: 301 RDLMEKMVNDS---------NLFHDQGR---IEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             L  KM + S          L H   +   + +  +  N M++MG  PD +T  +++ G
Sbjct: 521 EKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILG 580

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
            C+ G LD   KML++M       + ++    +   C   K  +A +++N        P+
Sbjct: 581 LCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPD 640

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
             TY+ +  GL R   L E+  ++ +M+++G  PT  +   LI  +CR G + GA +   
Sbjct: 641 VNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKD 700

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E    G +   V  ++++RG  Q G +EEA+ +LD M   +  P   T+TT++  L K  
Sbjct: 701 EMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKA 760

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           ++ EA +L  KM   G+   VV Y  +I   C  G       L E+M
Sbjct: 761 KLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEM 807



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 12/219 (5%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           K+  A  +L++     + P++   N     L   + L ++   L  M   GITP    Y 
Sbjct: 621 KMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYI 680

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------R 301
            LI G C +  I+ A +L DEM   G S   V+   ++  L +  +++E          +
Sbjct: 681 SLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQK 740

Query: 302 DLMEKMVNDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
            L+  +   + L H    + ++ EA +L  +M+  G   DVV Y  +++G C  G+   A
Sbjct: 741 RLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAA 800

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
             + ++M   G  PNT +Y   ++ +  N   +E R ++
Sbjct: 801 FNLYEEMKERGLWPNTTTYCTLIDAISTNEGEVEERLLV 839


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 220/491 (44%), Gaps = 46/491 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D   Y ++L  L      Q A  +L +MA  G +C P+  SY  V   + + G L     
Sbjct: 50  DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK--- 106

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
               M    ++PN++  N+ I  L     + KA+  L  M  +G+ P+ +TYN ++ G+C
Sbjct: 107 ----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 162

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              + K+AI  + +M   G  PD V+Y ++M YLCK                        
Sbjct: 163 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK-----------------------N 199

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR  EA+++ + M++ G  PD+ TY  ++ G+   G L +   +L  M  +G  PN   +
Sbjct: 200 GRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 259

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           +  +       K  EA  + +   ++   PNA+TY  V+  L + G++ +A     +M+ 
Sbjct: 260 SILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMID 319

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P  +  N LI SLC   K + A++   E L++G  ++ + F S+I   C++G + E
Sbjct: 320 EGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIE 379

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           +  L D M      PD +T           GR +EA +L +   S GLVP   TYR +  
Sbjct: 380 SGKLFDLMVRIGVKPDIITL----------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 429

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
                G +E+L +L   M     C       N ++  L   G +  AG  L  +      
Sbjct: 430 NIIGQGLLEELDQLFLSM-EDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFS 488

Query: 615 ADASTCHVLVE 625
            +AST  + ++
Sbjct: 489 LEASTASLFID 499



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 186/340 (54%), Gaps = 7/340 (2%)

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG--CSPDKVSYYTVMGYLCKEKRIKEVR 301
           P+V +YN L+ G CD +R ++A++L+  M   G  C PD VSY TV+    KE  + ++ 
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKML 108

Query: 302 D--LMEKMVNDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
           D  +   +V  +++         +++A E++  M + G +PD +TY ++V+GFC  G+  
Sbjct: 109 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPK 168

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A   L++M   G +P+ V+Y + ++ LC NG+  EAR++ ++  +    P+  TY  ++
Sbjct: 169 EAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLL 228

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            G   +G L E   ++  MV+ G  P     ++L+ +  ++ K++ A     +   +G  
Sbjct: 229 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLN 288

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            N V + ++I   C+ G +E+A+   + M      PD++ Y ++I +L    + E+A EL
Sbjct: 289 PNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEEL 348

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
            ++ML +G+  + + + ++I  +C+ GRV +  KL + M+
Sbjct: 349 FLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMV 388



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 211/478 (44%), Gaps = 82/478 (17%)

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
           +DA  + DE+  +G  PD  SY  ++  LC E R +E  +L+  M +D            
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGG---------- 82

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
                       C PDVV+Y+ V+NGF + G+LD   KML Q       PN V+Y + + 
Sbjct: 83  -----------DCPPDVVSYSTVINGFFKEGDLD---KMLDQR----ISPNVVTYNSIIA 124

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
            LC      +A E++ T  +    P+ +TY+ ++HG    G+  EA   +++M   G  P
Sbjct: 125 ALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEP 184

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
             V  N L+  LC+ G+   A+K       +G   ++  + +L++G+  KG L E   LL
Sbjct: 185 DVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLL 244

Query: 503 DDM--------------YLCKK---------------------DPDTVTYTTIIDALSKN 527
           D M               +C                       +P+ VTY T+ID L K+
Sbjct: 245 DLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKS 304

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--Y 585
           GRVE+A     +M+ +GL P  + Y ++IH  C   + E   +L  +ML +  C +   +
Sbjct: 305 GRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFF 364

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           N +I++ C  G + E+GK+   ++R   K D  T           G    A  +     +
Sbjct: 365 NSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITL----------GRNDEAKDLFVAFSS 414

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRF------VERGHIQPKSEEHLQRQRV 697
             L+P+    + ++E +I +G  EE D L L        V+ G +     E LQR  +
Sbjct: 415 NGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 472



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 5/268 (1%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           +L LM R GI      FS L+ AY++  K+  AM V S M++  + PN +   T I VL 
Sbjct: 243 LLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLC 302

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              ++  A+ + E+M   G+ P+ + YN LI   C   + + A +L  EM  +G     +
Sbjct: 303 KSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTI 362

Query: 283 SYYTVMGYLCKEKRIKE---VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
            + +++   CKE R+ E   + DLM ++    ++    GR +EAK+L    S  G +P+ 
Sbjct: 363 FFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDII-TLGRNDEAKDLFVAFSSNGLVPNY 421

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            TY  +       G L++  ++   M  +GC  ++      +  L   G+   A   ++ 
Sbjct: 422 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSM 481

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSE 427
            +E+ ++  A T S+ +  L   GK  E
Sbjct: 482 IDEKHFSLEASTASLFID-LLSGGKYQE 508


>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 143/582 (24%), Positives = 262/582 (45%), Gaps = 47/582 (8%)

Query: 67  VLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVL-RSQADERVAL 125
           +L + +  + +V  +C  ++  ++    L  E+  LL  L  ++I  VL R Q+D   AL
Sbjct: 104 LLPQTQNPNNIVNLICSNLKQHNSNLALLHTEVNALLPHLGAQEISRVLLRCQSDSFTAL 163

Query: 126 QFFYWADRQWRYRHDPIVYYMMLEILSKTK-LCQGAKRVLRLMA------------RRGI 172
            FF W       R     Y +++  L+ ++   Q  K +  L+             +  I
Sbjct: 164 SFFNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVELVKDDLPGEDVFKNLI 223

Query: 173 ECR------PEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
            C       P  F  L+ AY R G++R  +     M +    P ++  N  ++ L+  N 
Sbjct: 224 LCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNY 283

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
             +     E M+  GI PN+ T+N L    C         K +++M  +G  PD V+Y T
Sbjct: 284 TDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNT 343

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++   C+                       +GR+++A  L   M + G +PD+V+YTA++
Sbjct: 344 LINSYCR-----------------------KGRLDDAFYLYKIMYRRGVVPDLVSYTALM 380

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           NG C+ G + +A ++  +M H G  P+ V+Y   ++G C  GK  E+R +++       +
Sbjct: 381 NGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGIS 440

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P++ T  V++ G  +EGK   A ++V E+ + G   +    + LI +LCRE +   AK  
Sbjct: 441 PDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNL 500

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           ++     G    +  +  LI+ FCQ   + EAL L  +M   +  P+  TY  +J  LS+
Sbjct: 501 LERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSR 560

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ---VGRVEDLLKLLEKMLSKQKCRT 583
             R  E   L+ +M++ G +P +   R + + YC+   + + E LL    K        +
Sbjct: 561 LSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTES 620

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            +N +I    + G +  + +I   +L+     +  TC  +++
Sbjct: 621 -FNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVID 661



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 181/361 (50%), Gaps = 4/361 (1%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           GR+ E      +M ++G +P V+T   ++NG  ++   D+  ++ ++M   G  PN  ++
Sbjct: 247 GRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTF 306

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
               + LC +G + +  + +   EEE + P+ +TY+ +++   R+G+L +A  + + M +
Sbjct: 307 NILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYR 366

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +G  P  V    L+  LC+EG++  A +     +++G + ++V + +LI G+C++G ++E
Sbjct: 367 RGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQE 426

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           + SLL DM      PD+ T   +++   K G+   A  L++++   G+  +   Y  +I 
Sbjct: 427 SRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIV 486

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
             C+  R      LLE+M S+   +     YN++I++ C    + EA  +  +++    K
Sbjct: 487 ALCRENRPFAAKNLLERM-SQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIK 545

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            + +T   ++         +    +   M     +PDL++C+ +      E   ++A++L
Sbjct: 546 PNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESL 605

Query: 675 M 675
           +
Sbjct: 606 L 606



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 161/352 (45%), Gaps = 2/352 (0%)

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C  D V +  +V  + R+G + +  +  ++M   G  P  ++    LNGL     +    
Sbjct: 229 CNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCW 288

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E+    E     PN  T++++ H L ++G   +    + +M ++GF P  V  N LI S 
Sbjct: 289 EVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSY 348

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CR+G++D A    +    +G   ++V++T+L+ G C++G + EA  L   M      PD 
Sbjct: 349 CRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDI 408

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VTY T+I    K G+++E+  L+  M+  G+ P   T   ++  Y + G+    L L+ +
Sbjct: 409 VTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVE 468

Query: 575 M--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           +        +  Y+ +I  LC       A  +L ++ +   K +    + L++S+     
Sbjct: 469 LQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDC 528

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
              A  +   M ++ + P+L   + V   L    +S E ++L+   V  G +
Sbjct: 529 IAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXL 580


>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 242/500 (48%), Gaps = 37/500 (7%)

Query: 120 DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRG---IECRP 176
           D   ALQFF WA ++  Y H    Y+ MLEIL + +    A+  L  + +R    ++   
Sbjct: 91  DTSKALQFFNWA-QEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEA 149

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
             F+ LM  ++RAG  + ++ V ++M+   V+P+++  N+ + +L+   +   A +  + 
Sbjct: 150 RFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDE 209

Query: 237 M-QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
           M    G+TP+  T+N LI+G+C    + D  ++ +++   GC PD V+Y T++  LC+  
Sbjct: 210 MLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAG 269

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           ++    ++++ M   S                     +   P+VVTYT ++ G+C   E+
Sbjct: 270 KVTVAYNVVKGMGKKS---------------------VDLNPNVVTYTTLIRGYCAKREI 308

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI-NTSEEEWWTPNAITYSV 414
           ++A  + ++M + G K N ++Y   + GLC   K  + ++++  T+ +  ++P+  T++ 
Sbjct: 309 EKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNT 368

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK- 473
           +MH     G L +A  V   M +    P     + L++SLC+ G  + A+  + + L + 
Sbjct: 369 LMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERK 428

Query: 474 ------GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
                 GC   V  +  + +  C+ G  ++A      + + +   D  +Y T+I    K 
Sbjct: 429 ILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQL-MRRGTQDPPSYKTLIMGHCKE 487

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAY 585
           G  E   EL++ ML K  +P   TY ++I+    + +    L+ LEKML  S +   + +
Sbjct: 488 GTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTF 547

Query: 586 NQVIENLCSFGYLEEAGKIL 605
           + ++  L   G   E+  ++
Sbjct: 548 HSILAKLLEQGRTSESASLI 567



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/414 (22%), Positives = 183/414 (44%), Gaps = 33/414 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVL-RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           + +  +L IL K      AK+V   +++  G+      F+ L+  +   G + +   + +
Sbjct: 185 VTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFN 244

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM--QLAGITPNVLTYNCLIKGYCD 258
            + +    P+++  NT +  L    K+  A   ++ M  +   + PNV+TY  LI+GYC 
Sbjct: 245 DLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCA 304

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
              I+ A+ + +EM  +G   + ++Y T++  LC+ ++ ++++D++E    D        
Sbjct: 305 KREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTF----- 359

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
                             PD  T+  +++  C  G LD A K+ ++M     +P++ +Y+
Sbjct: 360 -----------------SPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYS 402

Query: 379 AFLNGLCHNGKSLEAREMINTSEE-------EWWTPNAITYSVVMHGLRREGKLSEACDV 431
           A +  LC  G   +A ++++   E       +   P    Y+ +   L   GK  +A   
Sbjct: 403 ALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKA 462

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
            R+++++G    P     LI   C+EG  +   + +   L K    +   + SLI G   
Sbjct: 463 FRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLH 521

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
                 AL  L+ M      P++ T+ +I+  L + GR  E+  L+  ML K +
Sbjct: 522 MDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNI 575


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 191/378 (50%), Gaps = 27/378 (7%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ LM  + R G+L +A  V   M+++ V P ++  NT I  +     L       + M 
Sbjct: 189 FNVLMRDFVRLGELVSARKVFDEMRRS-VQPTVVTFNTLISGMCRARDLDAVDGLYKEMS 247

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G+ P+V TY  LIKG+C   R+++A+K+ +EM   G +P+ V + T++   CKE    
Sbjct: 248 DVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKE---- 303

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                              G +    +L   M   G +PD+V Y A+VNG CR   L  A
Sbjct: 304 -------------------GNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAA 344

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
           + ++++M + G KP+ V+YT  ++G C +GK   A ++     E+  + + +TY+ ++ G
Sbjct: 345 ESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISG 404

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L + G+  +A  V+REM++    P      ++I + CR+G +    K ++E  NKG    
Sbjct: 405 LSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPG 464

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           VV +  ++ G C+ G ++ A  LL  M      PD +TY  ++D   K+G+V  + EL  
Sbjct: 465 VVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELES 524

Query: 539 KMLSKGLVPTVVTYRTVI 556
              SKG+VP    Y ++I
Sbjct: 525 ---SKGMVPDFAVYTSLI 539



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 197/419 (47%), Gaps = 29/419 (6%)

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
           S L  AY+  G L +A  ++ +  +  ++    +C+  +  L       +A  F  ++  
Sbjct: 123 SELAAAYADEGLLPDACSLVLLALRRGISLPAPVCSGLMSRL---PSTPEAYTFYLQLLD 179

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
           AG+ P    +N L++ +  L  +  A K+ DEM  +   P  V++ T++  +C+      
Sbjct: 180 AGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCR------ 232

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
            RDL                 +    L  +MS +G  PDV TY A++ GFCR G ++ A 
Sbjct: 233 ARDL-----------------DAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAV 275

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           KM  +M   G  PN V +T  ++  C  G      ++          P+ + Y+ +++GL
Sbjct: 276 KMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGL 335

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            R   L  A  +V EM   G  P  V    LI   C++GK+D A    Q+   K  +++ 
Sbjct: 336 CRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDE 395

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           V +T+LI G  + G   +A  +L +M     +PD  TYT +IDA  + G V+   +L+ +
Sbjct: 396 VTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKE 455

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS--KQKCRTAYNQVIENLCSFG 596
           M +KG  P VVTY  +++  C++G++++   LL  ML+         YN +++  C  G
Sbjct: 456 MQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHG 514



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 184/395 (46%), Gaps = 20/395 (5%)

Query: 252 LIKGYCDLHRIKDAIKLI-------DEMPLKGCS------PDKVSYYTVMGYLCKEKRIK 298
           L   Y D   + DA  L+         +P   CS      P     YT    L       
Sbjct: 125 LAAAYADEGLLPDACSLVLLALRRGISLPAPVCSGLMSRLPSTPEAYTFYLQLLDAGMAP 184

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
           E R L   ++ D   F   G +  A+++ ++M +    P VVT+  +++G CR  +LD  
Sbjct: 185 ETR-LFNVLMRD---FVRLGELVSARKVFDEMRR-SVQPTVVTFNTLISGMCRARDLDAV 239

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             + ++M   G KP+  +Y A + G C  G+   A +M N   +    PNA+ ++ ++  
Sbjct: 240 DGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDA 299

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
             +EG ++   D+ ++M  +G  P  V  N L+  LCR   +  A+  ++E  N G   +
Sbjct: 300 HCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPD 359

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
            V +T+LI G C+ G L+ A+ +   M   +   D VTYT +I  LSK GR  +A  ++ 
Sbjct: 360 KVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLR 419

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK--CRTAYNQVIENLCSFG 596
           +M+   L P   TY  VI  +C+ G V+   KLL++M +K K      YN ++  LC  G
Sbjct: 420 EMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLG 479

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            ++ A  +L  +L      D  T ++L++     G
Sbjct: 480 QMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHG 514



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 182/402 (45%), Gaps = 27/402 (6%)

Query: 166 LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
           L  RRGI       S LM   SR      A      +  A +AP   + N  +   V   
Sbjct: 144 LALRRGISLPAPVCSGLM---SRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLG 200

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           +L  A +  + M+ + + P V+T+N LI G C    +     L  EM   G  PD  +Y 
Sbjct: 201 ELVSARKVFDEMRRS-VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYG 259

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            ++   C+                        GR+E A ++ N+M   G  P+ V +T +
Sbjct: 260 ALIKGFCR-----------------------TGRMENAVKMFNEMRDTGVNPNAVVFTTL 296

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++  C+ G ++    + Q M   G  P+ V+Y A +NGLC       A  ++   +    
Sbjct: 297 IDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGL 356

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+ +TY+ ++ G  ++GKL  A D+ ++M +K      V    LI  L + G+   A++
Sbjct: 357 KPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAER 416

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            ++E +      +   +T +I  FC+KGD++    LL +M    K P  VTY  I++ L 
Sbjct: 417 VLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLC 476

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
           K G+++ A  L+  ML+ G+ P  +TY  ++   C+ G+V +
Sbjct: 477 KLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVAN 518



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 167/360 (46%), Gaps = 10/360 (2%)

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
           S L        EA     Q+   G  P+   +  ++  F R+GEL  A+K+  +M     
Sbjct: 158 SGLMSRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSV 216

Query: 371 KPNTVSYTAFLNGLCHNGKSLEARE-MINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
           +P  V++   ++G+C   + L+A + +     +    P+  TY  ++ G  R G++  A 
Sbjct: 217 QPTVVTFNTLISGMCR-ARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAV 275

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            +  EM   G  P  V    LI + C+EG ++      Q+   +G   ++V + +L+ G 
Sbjct: 276 KMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGL 335

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+  +L+ A S++++M      PD VTYTT+ID   K+G+++ A ++  KM  K +    
Sbjct: 336 CRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDE 395

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
           VTY  +I    + GR  D  ++L +M+    +   T Y  VI+  C  G ++   K+L +
Sbjct: 396 VTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKE 455

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +     K    T +V++      G    A  +   M N  + PD      ++  ++L+G+
Sbjct: 456 MQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPD-----DITYNILLDGQ 510



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 177/385 (45%), Gaps = 35/385 (9%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQIC-AVLRS---QADERVALQFFYWAD 132
           L+R+  RL EL SA   K+  E+R   RS++P  +    L S   +A +  A+   Y   
Sbjct: 192 LMRDFVRLGELVSAR--KVFDEMR---RSVQPTVVTFNTLISGMCRARDLDAVDGLYKEM 246

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
                + D   Y  +++   +T   + A ++   M   G+      F+ L+ A+ + G +
Sbjct: 247 SDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNV 306

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
              M +   M+   V P+L+  N  ++ L     L  A   +E M+ AG+ P+ +TY  L
Sbjct: 307 NAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTL 366

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I G C   ++  A+ +  +M  K  S D+V+Y  ++  L K                   
Sbjct: 367 IDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSK------------------- 407

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                GR  +A+ ++ +M +    PD  TYT V++ FCR G++    K+L++M + G KP
Sbjct: 408 ----AGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKP 463

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
             V+Y   +NGLC  G+   A  +++       +P+ ITY++++ G  + GK++ + ++ 
Sbjct: 464 GVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELE 523

Query: 433 REMVKKGFFPTPVEINLLIQSLCRE 457
                KG  P       LI  L ++
Sbjct: 524 SS---KGMVPDFAVYTSLISELAKK 545



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 108/249 (43%), Gaps = 20/249 (8%)

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRR---------EGKLS------EACDVVREMVKKG 439
           E+     +E   P+A   S+V+  LRR          G +S      EA     +++  G
Sbjct: 124 ELAAAYADEGLLPDAC--SLVLLALRRGISLPAPVCSGLMSRLPSTPEAYTFYLQLLDAG 181

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     N+L++   R G++  A+K   E + +     VV F +LI G C+  DL+   
Sbjct: 182 MAPETRLFNVLMRDFVRLGELVSARKVFDE-MRRSVQPTVVTFNTLISGMCRARDLDAVD 240

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            L  +M      PD  TY  +I    + GR+E A ++  +M   G+ P  V + T+I  +
Sbjct: 241 GLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAH 300

Query: 560 CQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           C+ G V   + L + M  +       AYN ++  LC    L+ A  I+ ++     K D 
Sbjct: 301 CKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDK 360

Query: 618 STCHVLVES 626
            T   L++ 
Sbjct: 361 VTYTTLIDG 369



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 34/230 (14%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D + Y  +++   K      A  + + MA + +      ++ L+   S+AG+  +A  
Sbjct: 357 KPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAER 416

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL  M +AA+ P+       I        +    + L+ MQ  G  P V+TYN ++ G C
Sbjct: 417 VLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLC 476

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
            L ++K+A  L+  M   G SPD ++Y  ++   CK                        
Sbjct: 477 KLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCK-----------------------H 513

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           G++  ++EL    S  G +PD   YT++++        + AKK   + YH
Sbjct: 514 GKVANSEEL---ESSKGMVPDFAVYTSLIS--------ELAKKKPAKNYH 552



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 7/165 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + Y  ++  LSK      A+RVLR M    +E  P+  +Y MV  A+ R G ++    
Sbjct: 394 DEVTYTALISGLSKAGRPVDAERVLREMMEAALE--PDNTTYTMVIDAFCRKGDVKTGFK 451

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  MQ     P ++  N  ++ L    ++  A   L  M   G++P+ +TYN L+ G C
Sbjct: 452 LLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQC 511

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
              ++ ++ +L      KG  PD   Y +++  L K+K  K   D
Sbjct: 512 KHGKVANSEELESS---KGMVPDFAVYTSLISELAKKKPAKNYHD 553


>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 238/486 (48%), Gaps = 16/486 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN-KLAKALRFLERM 237
           F  ++    RA  +R  + VL ++ K    P+L I N+ + VLV  +  LA+   + ++M
Sbjct: 14  FVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDIDLAREF-YRKKM 72

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
            + G++ +  T+  L+KG C  +RI DA KL+  M  +G +P+ V Y T++  LCK  ++
Sbjct: 73  MMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKV 132

Query: 298 KEVRDLMEKMVNDSNL--------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
              R LM +MV  S++        +  +  + +A  L+ +   MG +PDVVT T VV   
Sbjct: 133 GRARSLMNEMVEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGIL 192

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G + +  ++L+++   G   + V+Y   + G C  GK+     ++   E +   PN 
Sbjct: 193 CKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNV 252

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ- 468
            TY+++  G    G L  A D+  +M   G     +  + LI+ LC  G+M+   K ++ 
Sbjct: 253 DTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILEL 312

Query: 469 -ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            E    G    +  + S+I G  +K   EEAL  L  M   K  P  V  +  I      
Sbjct: 313 MEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKME--KLFPRAVDRSLRILGFCNE 370

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--Y 585
           G + +A  +  +M+ +G VP+V+ Y  +IH +CQ G V +  +L+ +M+      TA  +
Sbjct: 371 GSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTF 430

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           N +I   C  G +  A K++  ++      D  +   +V++  NKG    A ++  +M  
Sbjct: 431 NALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVE 490

Query: 646 RNLIPD 651
           ++++PD
Sbjct: 491 KDILPD 496



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 224/482 (46%), Gaps = 22/482 (4%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDPI--VYYMMLEILSKTKLCQGAKRVLRLMARR 170
            ++R     R+  Q     D   ++  +P   ++  +L++L K  +    +   + M   
Sbjct: 16  TIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDIDLAREFYRKKMMMN 75

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G+      F  LM       ++ +A  +L +M+     PN +I NT IH L    K+ +A
Sbjct: 76  GVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRA 135

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
              +  M    + P+ +T+N LI  YC    +  A+ L+++    G  PD V+   V+G 
Sbjct: 136 RSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGI 191

Query: 291 LCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPD 338
           LCK  R+ E  +++E++ +   +            F   G+ +    ++  M   GC+P+
Sbjct: 192 LCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPN 251

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V TY  + +G+C  G LD A  +   M   G   N ++Y   + GLC  G+  +  +++ 
Sbjct: 252 VDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILE 311

Query: 399 TSEEEWWTPNA--ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
             EE           Y+ +++GL ++ +  EA + + +M K   FP  V+ +L I   C 
Sbjct: 312 LMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEK--LFPRAVDRSLRILGFCN 369

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           EG +  AK+   + + +G   +V+ +  LI GFCQ G++ EA  L+++M      P   T
Sbjct: 370 EGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPT 429

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           +  +I A    G+V  A +LM  M+ +G +P + +Y  ++   C  G  +  ++L  +M+
Sbjct: 430 FNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMV 489

Query: 577 SK 578
            K
Sbjct: 490 EK 491



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 199/403 (49%), Gaps = 24/403 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + ++Y  M+  L K      A+ ++  M    +E     F+ L+ AY +   L  A+ +L
Sbjct: 115 NTVIYNTMIHALCKNGKVGRARSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLL 170

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
                    P+++     + +L    ++ + +  LER++  G   +V+ YN LIKG+C L
Sbjct: 171 EKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCML 230

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFH 315
            + K   +++ +M +KGC P+  +Y  +    C    +    DL   M    +N + + +
Sbjct: 231 GKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTY 290

Query: 316 DQ--------GRIEEAKELVNQM--SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
           D         GR+E+  +++  M  S+ G    +  Y +++ G  +  + ++A + L +M
Sbjct: 291 DTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKM 350

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
                 P  V  +  + G C+ G   +A+ + +   +E   P+ + Y  ++HG  ++G +
Sbjct: 351 --EKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNV 408

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA +++ EMV  G+FPT    N LI + C +GK+  A K M++ + +GC  ++ +++ +
Sbjct: 409 REAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPM 468

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSK 526
           +   C KGD ++A+ L   + + +KD  PD  T+ +++  L++
Sbjct: 469 VDALCNKGDFQKAVRLF--LQMVEKDILPDYSTWNSMLLCLTQ 509



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 196/425 (46%), Gaps = 22/425 (5%)

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEKMVNDSNL--FHD------QGRIEEAK 324
           G  PD+  + T++  L + + +++   V DL+ K   + +L  F+       +  I+ A+
Sbjct: 6   GSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDIDLAR 65

Query: 325 ELV-NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
           E    +M   G   D  T+  ++ G C    +  A K+LQ M   G  PNTV Y   ++ 
Sbjct: 66  EFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHA 125

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           LC NGK   AR ++N   E    P+ +T++V++    +E  L +A  ++ +    GF P 
Sbjct: 126 LCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPD 181

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V    ++  LC+ G++    + ++   + G  V+VV + +LI+GFC  G  +    +L 
Sbjct: 182 VVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLK 241

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           DM +    P+  TY  +      +G ++ A +L   M + G+    +TY T+I   C  G
Sbjct: 242 DMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGG 301

Query: 564 RVEDLLKLLEKMLSKQKCR----TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
           R+ED  K+LE M   +       + YN +I  L      EEA + L K+ +   +A   +
Sbjct: 302 RMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRS 361

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
             +L   + N+G    A +V  +M     +P + +   +      +G   EA  L+   V
Sbjct: 362 LRIL--GFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMV 419

Query: 680 ERGHI 684
           + G+ 
Sbjct: 420 DHGYF 424



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 12/292 (4%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           A++ L+  +   GK +    VL  M+     PN+   N           L  A+     M
Sbjct: 219 AYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDM 278

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP-LKGCSPDKVSYYTVMGY-LCKEK 295
           +  GI  N +TY+ LI+G C   R++D  K+++ M   +G +  ++S Y  + Y L K+ 
Sbjct: 279 KTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKN 338

Query: 296 RIKEVRDLMEKM------VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
           + +E  + + KM        D +L    F ++G I +AK + +QM + G +P V+ Y  +
Sbjct: 339 QFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCL 398

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++GFC+ G + +A +++ +M  HG  P   ++ A ++  C  GK   A +++        
Sbjct: 399 IHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGC 458

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
            P+  +YS ++  L  +G   +A  +  +MV+K   P     N ++  L +E
Sbjct: 459 LPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQE 510


>gi|147790305|emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 218/477 (45%), Gaps = 47/477 (9%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           +++ +LSK  + + A  V R++  +G      +++ ++ A  + G+   A+ +L  ++K 
Sbjct: 193 LLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKM 252

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
               N       ++         +A   L+ M++ G  PNV+TY  ++K  CD  RI DA
Sbjct: 253 GAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDA 312

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------------------ 307
           + ++ +M  +GC PD V+Y  ++  L  + R  E+ +L++ +                  
Sbjct: 313 LDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGG 372

Query: 308 ------VNDSN--------------------LFH---DQGRIEEAKELVNQMSQMGCIPD 338
                 V  +N                     FH    + +  EA  L+  M + G +P 
Sbjct: 373 LLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPT 432

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            V+Y  ++NGFCR   +D+A ++          P+ VS+   L+  C  G S   R ++ 
Sbjct: 433 NVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLY 492

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
             E E    N ++ + ++      GK+SE  +++  M++ G  PT V  N+L+  LC+ G
Sbjct: 493 RMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNG 552

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
            +  A +  +E  N G   N  ++  LI    ++G+      LL DMY  +  PD VTY 
Sbjct: 553 LLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYG 612

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           + I  L K G++  A +L  +ML  GL PTV  Y T++    Q G+  D++ LL+ M
Sbjct: 613 SFIKGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTILAAMFQRGKFWDIVSLLKDM 669



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/530 (24%), Positives = 235/530 (44%), Gaps = 14/530 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R G       F+ L+   +  G LR A +    M ++   P+       +   +    
Sbjct: 109 MKRLGPYPNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGS 168

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L  ++   E M      P   T N LI         ++A  +   +  KGC     SY  
Sbjct: 169 LVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNP 228

Query: 287 VMGYLCKEKRIKEVRDLM---EKMVNDSNL---------FHDQGRIEEAKELVNQMSQMG 334
           ++  LCK  +      L+   +KM    N          F  +G  EEA  ++++M   G
Sbjct: 229 ILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDG 288

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C P+V+TYT +V   C  G +  A  +L +M   GC P+ V+Y   L  L H  + +E  
Sbjct: 289 CKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIG 348

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E++   +++  +P++ TY+ +  GL + G++  A  ++  ++  G        N+    L
Sbjct: 349 ELLQVIDQKEISPDSFTYAALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCL 408

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           CRE K   A   +Q  + KG     V++ +++ GFC++  ++EAL L D        PD 
Sbjct: 409 CRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDV 468

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           V++ TI+ A  K G       ++ +M  +G+   VV+   +I  +C +G++ + L+LLE 
Sbjct: 469 VSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLES 528

Query: 575 MLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M+      T   +N +++ LC  G L  A +I  +   T    + ++ ++L+ + + +G 
Sbjct: 529 MIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGN 588

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             L  ++   M++  L PD        + L  EGK   A  L  + +E G
Sbjct: 589 DSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESG 638



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 198/451 (43%), Gaps = 18/451 (3%)

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA--YSRAGKLRNAM 196
           H+   Y  ++   SK  L + A  +L  M   G  C+P   +Y ++       G++ +A+
Sbjct: 256 HNAASYTALVYGFSKEGLWEEAFCMLDEMKIDG--CKPNVITYTVIVKFLCDEGRIGDAL 313

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M K    P+++  N  +  L   ++  +    L+ +    I+P+  TY  L  G 
Sbjct: 314 DILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGL 373

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
               +++ A KL+  +   GC+ D   Y      LC+E +  E   L++ MV        
Sbjct: 374 LKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTN 433

Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                  N F  +  I+EA +L +        PDVV++  +++  C+ G     +++L +
Sbjct: 434 VSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYR 493

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M + G K N VS T  +   C  GK  E  E++ +       P  +T+++++  L + G 
Sbjct: 494 MEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGL 553

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L  A  + RE    G+FP     N+LI +  REG     ++ +++  +     + V + S
Sbjct: 554 LGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGS 613

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
            I+G C++G +  A+ L D M      P    Y TI+ A+ + G+  +   L+  M   G
Sbjct: 614 FIKGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTILAAMFQRGKFWDIVSLLKDMTMDG 673

Query: 545 LVPTVVTYRTVIHRY--CQVGRVEDLLKLLE 573
             P  V+   +      C + R  ++ K LE
Sbjct: 674 CEPNAVSIEILKQAMSKCWMKRFPEVSKQLE 704



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 156/357 (43%), Gaps = 15/357 (4%)

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++E  ++   M ++G  P+  T+  +++G    G L  A    ++M+  G  P+  S   
Sbjct: 99  LDELVQVYFGMKRLGPYPNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLK 158

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L      G  +++  +        + P   T ++++  L + G   EA  V R ++ KG
Sbjct: 159 ILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKG 218

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
                   N ++ +LC+ G+   A   +      G   N  ++T+L+ GF ++G  EEA 
Sbjct: 219 CLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAF 278

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH-- 557
            +LD+M +    P+ +TYT I+  L   GR+ +A +++ KM  +G  P +VTY  ++   
Sbjct: 279 CMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILREL 338

Query: 558 ----RYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
               RY ++G   +LL+++++        T Y  +   L   G +  A K+L  V+    
Sbjct: 339 FHQDRYVEIG---ELLQVIDQKEISPDSFT-YAALTGGLLKRGQVRVANKLLLYVISAGC 394

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
             D +  ++       +     A  +   M  + L+P       VS   IL G   E
Sbjct: 395 TVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVP-----TNVSYNTILNGFCRE 446



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 114/283 (40%), Gaps = 3/283 (1%)

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           NA+ Y  +    R    L E   V   M + G +P     N+L+  +   G +  A  F 
Sbjct: 82  NALLYHYLKSSSRHLIVLDELVQVYFGMKRLGPYPNASTFNILLDGMTSTGNLRAAFFFA 141

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
           +E    G   +  +   +++ +   G L +++S+ + M   +  P   T   +I  LSK 
Sbjct: 142 EEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKA 201

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE--KMLSKQKCRTAY 585
           G   EA  +   +L KG +    +Y  ++   C+ G+    L LL   K +       +Y
Sbjct: 202 GMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASY 261

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
             ++      G  EEA  +L ++     K +  T  V+V+   ++G    A  +  +M  
Sbjct: 262 TALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGK 321

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
               PD+     +   L  + +  E   L L+ +++  I P S
Sbjct: 322 EGCDPDIVTYNVILRELFHQDRYVEIGEL-LQVIDQKEISPDS 363


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 208/445 (46%), Gaps = 26/445 (5%)

Query: 127 FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY 186
           F    D   R+R        +L  L   +    A+R  +   RR +      F+ ++   
Sbjct: 136 FLLAGDAHPRHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGL 195

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR---FLERMQLAGIT 243
            + G+LR A  V   ++   +AP+++  NT I       +  +       L+ M  AGI+
Sbjct: 196 CKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGIS 255

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           PN +T+N L+ GYC       A+++ +EM  +G +   V+Y  ++  LC E         
Sbjct: 256 PNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSE--------- 306

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                         G++EE  +LV++M  +G +P++ T  +V+NGFC+ G +  A+  + 
Sbjct: 307 --------------GKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWID 352

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M     KPN V+YT  ++G     K  +A  +      +   PNA  Y+ ++ G  R G
Sbjct: 353 SMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNG 412

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
                  ++ EM  KG     V  N+LI +LC +G++  A K + E L  G     + + 
Sbjct: 413 DWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYN 472

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           ++I G+C+KG+++ A  +   M   KK  + VTY   I  L + G++EE  EL+ +ML K
Sbjct: 473 TIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEK 532

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDL 568
           GLVP  VTY T+     + G   D+
Sbjct: 533 GLVPNGVTYDTIKEGMMEKGYTPDV 557



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 202/430 (46%), Gaps = 30/430 (6%)

Query: 175 RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           RP AFS   L+ A   A ++  A        +  V+P+L   N  I  L    +L KA  
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCD---LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
             + ++  G+ P+V+TYN +I GYC      R+     L+ EM   G SP++V++  ++ 
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
             CK                DSN          A  +  +M Q G    VVTY+A+V G 
Sbjct: 267 GYCK----------------DSN-------TAAAVRVFEEMKQQGIAASVVTYSALVWGL 303

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C  G++++  K++ +M   G  PN  +  + LNG C  G   +A   I++ E++   PN 
Sbjct: 304 CSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNV 363

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           +TY++++ G RR  K+ +A  V   M  KG  P     N LI    R G        + E
Sbjct: 364 VTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDE 423

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              KG   ++V +  LI   C KG++ +A+ LLD+M +   +P  +TY TII+   + G 
Sbjct: 424 MRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGN 483

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQ 587
           ++ A E+  +M        VVTY   I   C++G++E+  +LL +ML K        Y+ 
Sbjct: 484 IKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDT 543

Query: 588 VIENLCSFGY 597
           + E +   GY
Sbjct: 544 IKEGMMEKGY 553



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 198/420 (47%), Gaps = 34/420 (8%)

Query: 225 NKLAKALRFLERMQLAG----------ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N+L  AL   ER+ LA           ++P++ T+N +I G C   +++ A  +  ++  
Sbjct: 154 NRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRA 213

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
            G +P  V+Y T++   CK  R                     GR+     L+ +M + G
Sbjct: 214 WGLAPSVVTYNTIIDGYCKRGR--------------------AGRMYHVDALLKEMVEAG 253

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P+ VT+  +VNG+C+      A ++ ++M   G   + V+Y+A + GLC  GK  E  
Sbjct: 254 ISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGV 313

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           ++++  ++    PN  T + V++G  ++G +++A   +  M +K   P  V   +L+   
Sbjct: 314 KLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGY 373

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            R  KM  A    +    KG   N   +  LI GF + GD      LLD+M +     D 
Sbjct: 374 RRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADI 433

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VTY  +I AL   G V +A +L+ +ML  GL P  +TY T+I+ YC+ G ++   ++  +
Sbjct: 434 VTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTR 493

Query: 575 MLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           M  K K R     YN  I+ LC  G +EE  ++L ++L      +  T   + E  + KG
Sbjct: 494 M-EKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKG 552



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 171/351 (48%), Gaps = 5/351 (1%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS---LEA 393
           PD+ T+  V++G C+ G+L +A  + + +   G  P+ V+Y   ++G C  G++      
Sbjct: 183 PDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHV 242

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
             ++    E   +PN +T++V+++G  ++   + A  V  EM ++G   + V  + L+  
Sbjct: 243 DALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWG 302

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           LC EGK++   K + E  + G   N+    S++ GFC+KG + +A   +D M      P+
Sbjct: 303 LCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPN 362

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VTYT ++D   +  ++++A  +   M  KG+ P    Y  +I  + + G    +  LL+
Sbjct: 363 VVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLD 422

Query: 574 KMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           +M  K  +     YN +I  LC  G + +A K+L ++L    +    T + ++  Y  KG
Sbjct: 423 EMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKG 482

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
               AY++  RM       ++       + L   GK EE + L+   +E+G
Sbjct: 483 NIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKG 533



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 173/400 (43%), Gaps = 53/400 (13%)

Query: 119 ADERVAL--QFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP 176
           A ERV L  + F  A R+ R   D   + +++  L KT   + A  V + +   G+    
Sbjct: 162 AAERVDLAERAFKAALRR-RVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSV 220

Query: 177 EAFSYLMVAY---SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
             ++ ++  Y    RAG++ +   +L  M +A ++PN +  N  ++     +  A A+R 
Sbjct: 221 VTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRV 280

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
            E M+  GI  +V+TY+ L+ G C   ++++ +KL+DEM   G  P+  +  +V+   CK
Sbjct: 281 FEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCK 340

Query: 294 EKRIKEVR---DLMEKMVNDSNL------------------------------------- 313
           +  + +     D ME+     N+                                     
Sbjct: 341 KGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARI 400

Query: 314 -------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                  F   G       L+++M   G   D+VTY  ++   C  GE+ +A K+L +M 
Sbjct: 401 YNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEML 460

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G +P  ++Y   +NG C  G    A E+    E+     N +TY+V +  L R GK+ 
Sbjct: 461 MVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKME 520

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           E  +++ EM++KG  P  V  + + + +  +G     + F
Sbjct: 521 ETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPDVRGF 560


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 244/508 (48%), Gaps = 34/508 (6%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           I A L S A   VAL FF WA    ++RH   +Y      L   K  + A  V++ M + 
Sbjct: 82  IVASLASDAGSMVALSFFNWAIASSKFRHFTRLYIACAASLISNKNFEKAHEVMQCMVK- 140

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
                         +++  G+++ A+ ++  M    +AP+    N  + ++     +  A
Sbjct: 141 --------------SFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYA 186

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
               + M   G+ PN ++Y  ++ GYC L  + ++ + +  M  +G   D  +   ++  
Sbjct: 187 ENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVRE 246

Query: 291 LCKE----------KRIKEVRDLMEKMVNDSNLFHD---QGRIEEAKELVNQMSQMGCIP 337
            C++          +R  E+  L   ++N + +      +G +++A E++ +M   G  P
Sbjct: 247 FCEKGFVTRALWYFRRFCEM-GLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKP 305

Query: 338 DVVTYTAVVNGFCRVGELDQAKKM-LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           +V T+TA+++G C+ G  ++A ++ L+ +     KPN ++YTA ++G C + K   A  +
Sbjct: 306 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEML 365

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           ++  +E+   PN  TY+ ++ G  + G    A +++  M ++GF P     N ++  LC+
Sbjct: 366 LSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCK 425

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           +G++  A K ++     G   + V +T LI   C++ ++++AL L + M      PD  +
Sbjct: 426 KGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHS 485

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           YTT+I    +  R++E+     + +  GLVPT  TY ++I  YC+ G +   LK   +M 
Sbjct: 486 YTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRM- 544

Query: 577 SKQKCRT---AYNQVIENLCSFGYLEEA 601
           S   C +    Y  +I  LC    L+EA
Sbjct: 545 SDHGCASDSITYGALISGLCKQSKLDEA 572



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 231/462 (50%), Gaps = 16/462 (3%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGK-LRNAMYVLSMMQKA 205
           +++I+++  L + A+ +   M  RG++    ++  ++V Y + G  L +  ++  M+++ 
Sbjct: 173 VVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERG 232

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            V  N  + +  +        + +AL +  R    G+ PN++ + C+I+G C    +K A
Sbjct: 233 FVVDNATL-SLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQA 291

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------ 313
            ++++EM  +G  P+  ++  ++  LCK+   ++   L  K+V   N             
Sbjct: 292 FEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMIS 351

Query: 314 -FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
            +    ++  A+ L+++M + G  P+  TYT +++G C+ G  ++A +++  M   G  P
Sbjct: 352 GYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSP 411

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N  +Y A ++GLC  G+  EA +++ +        + +TY++++    ++ ++ +A  + 
Sbjct: 412 NVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLF 471

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            +MVK G  P       LI   CRE +M  ++ F +E +  G       +TS+I G+C++
Sbjct: 472 NKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCRE 531

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G+L  AL     M       D++TY  +I  L K  +++EA  L   M+ KGL P  VT 
Sbjct: 532 GNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTR 591

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCS 594
            T+ + YC++      + +LE++  K   RT  N ++  LCS
Sbjct: 592 VTLAYEYCKIDDGCSAMVVLERLEKKLWVRTV-NTLVRKLCS 632



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 173/374 (46%), Gaps = 10/374 (2%)

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           Y      L   K  ++  ++M+ MV     F + GR++EA E+V +M   G  P   T  
Sbjct: 115 YIACAASLISNKNFEKAHEVMQCMVKS---FAEIGRVKEAIEMVIEMHNQGLAPSTKTLN 171

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            VV     +G ++ A+ +  +M   G +PN VSY   + G C  G  LE+   +    E 
Sbjct: 172 WVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIER 231

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
            +  +  T S+++     +G ++ A    R   + G  P  +    +I+ LC+ G +  A
Sbjct: 232 GFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQA 291

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD-PDTVTYTTIID 522
            + ++E + +G   NV   T+LI G C+KG  E+A  L   +   +   P+ +TYT +I 
Sbjct: 292 FEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMIS 351

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----LSK 578
              ++ ++  A  L+ +M  +GL P   TY T+I  +C+ G  E   +L+  M     S 
Sbjct: 352 GYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSP 411

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
             C   YN +++ LC  G ++EA K+L    R    AD  T  +L+  +  +     A  
Sbjct: 412 NVC--TYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALV 469

Query: 639 VACRMFNRNLIPDL 652
           +  +M    + PD+
Sbjct: 470 LFNKMVKSGIQPDI 483



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 167/365 (45%), Gaps = 30/365 (8%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           A + F    R   ++ + + Y  M+    + +    A+ +L  M  +G+      ++ L+
Sbjct: 326 AFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLI 385

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             + +AG    A  ++++M +   +PN+   N  +  L    ++ +A + L+     G+ 
Sbjct: 386 DGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLD 445

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
            + +TY  LI  +C    IK A+ L ++M   G  PD  SY T++   C+EKR+KE    
Sbjct: 446 ADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMF 505

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            E+ V                       + G +P   TYT+++ G+CR G L  A K   
Sbjct: 506 FEEAV-----------------------RFGLVPTNKTYTSMICGYCREGNLRLALKFFH 542

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M  HGC  ++++Y A ++GLC   K  EAR + +   E+  TP  +T   + +      
Sbjct: 543 RMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAY---EYC 599

Query: 424 KLSEACD--VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           K+ + C   VV E ++K  +   V  N L++ LC E K+  A  F  + L+K   VN V 
Sbjct: 600 KIDDGCSAMVVLERLEKKLWVRTV--NTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVT 657

Query: 482 FTSLI 486
             + +
Sbjct: 658 IAAFM 662



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 2/165 (1%)

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK- 578
           ++ + ++ GRV+EA E++++M ++GL P+  T   V+    ++G VE    L ++M ++ 
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 579 -QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
            Q    +Y  ++   C  G + E+ + LG ++      D +T  ++V  +  KG    A 
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
               R     L P+L     + E L   G  ++A  ++   V RG
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRG 302


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 268/586 (45%), Gaps = 61/586 (10%)

Query: 103 LRSLKPRQI-CAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAK 161
           L +L+P  +   V + +++   AL+FF WA+      H    +  +  +L + ++   A 
Sbjct: 50  LPNLQPAHLEPVVFQLRSNPTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPAT 109

Query: 162 RVL-RLMARRG-IECRPE--------------AFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           RV  R++ + G +E   E               +S+L+  Y R G +  A+   + M K 
Sbjct: 110 RVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKM 169

Query: 206 AVAP---------NLLICNTAIHVLV---------VG------------NKLAKALRFLE 235
            V+          +LLI +  I V++         +G             ++ K L F  
Sbjct: 170 GVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHR 229

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            +   G+ P ++  N ++KG C  ++I  A    D M   G SP+ V++ T++   CKE 
Sbjct: 230 ALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKEL 289

Query: 296 RIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           R+ E   L   M+               N     G++EE   L +     G   DVV ++
Sbjct: 290 RLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFS 349

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
           ++++ + RVG+L +A ++  +M   G  PN V+Y+  +NGLC NG+ LEA  +     ++
Sbjct: 350 SIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQ 409

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+ +TYS ++ G  +   L +   +   M++KG  P  V  ++LI  L R+G MD A
Sbjct: 410 GLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEA 469

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            +F  + + +G  +N   F +LI G  +     + L +   M + K  PD VTYT ++  
Sbjct: 470 LRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKG 529

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
           L++ GR++EA  L  ++L KG  P  + Y T+I  +C+       L++ + M S      
Sbjct: 530 LAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPD 589

Query: 584 --AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
              YN +I      G +E   ++L ++++   + D  T + ++  Y
Sbjct: 590 ICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGY 635



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/554 (24%), Positives = 247/554 (44%), Gaps = 19/554 (3%)

Query: 123 VALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
           VA  FF   D   R    P  + +  ++ +  K      A  +  LM  +GI      +S
Sbjct: 258 VASDFF---DMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYS 314

Query: 181 YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
            L+    RAGKL     + SM     V  +++I ++ +   V    L KA+    RM   
Sbjct: 315 ILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE 374

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           GI+PNV+TY+ LI G C   R+ +A  +  ++  +G  P  ++Y +++   CK + +++ 
Sbjct: 375 GISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDG 434

Query: 301 RDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             L   M+               N    QG ++EA     Q  + G   +   + A+++G
Sbjct: 435 FGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG 494

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
             R+       KM   M  +   P+ V+YT  + GL   G+  EA  +     ++ ++P+
Sbjct: 495 CFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPD 554

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
            I Y  ++ G  ++   +    + + M   G FP     N+LI    REG ++   + ++
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLR 614

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E +  G   ++V + ++I G+C      +A+ L + +   +  P+ +T+T +IDA  K+G
Sbjct: 615 EIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDG 674

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYN 586
           R+++A  +   ML +G  P ++TY  +I  Y +    E   +L EKML  +      +Y+
Sbjct: 675 RMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYS 734

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I+ LC  G +EEA       +      D     +L+  Y   G    A  +   M   
Sbjct: 735 ILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVN 794

Query: 647 NLIPDLKLCKKVSE 660
            ++PD  L K ++E
Sbjct: 795 GIMPDDLLQKALAE 808


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 149/544 (27%), Positives = 258/544 (47%), Gaps = 37/544 (6%)

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           +G+      F+  + A+ + GK+  A+ + S M++A V PN++  NT I  L +  +  +
Sbjct: 246 KGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDE 305

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A  F E+M   G+ P ++TY+ L+KG     RI DA  ++ EM  KG  P+ + Y  ++ 
Sbjct: 306 AFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLID 365

Query: 290 YLCKEKRIK---EVRDLM--EKMVNDSNLFHD-------QGRIEEAKELVNQMSQMGCIP 337
            L +   +    E++DLM  + +   S+ ++         G+ + A+ L+ +M  +G   
Sbjct: 366 SLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNV 425

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           +  ++T+V+   C     D A + + +M      P     T  ++GLC +GK  +A E+ 
Sbjct: 426 NQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELW 485

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
                + +  +  T + ++HGL   GKL E   + +E++ +GF    V  N LI   C  
Sbjct: 486 LKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGN 545

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD---PDT 514
            K+D A  FM E + KG   +   ++ LIRG      +EEA+    D   CK++   PD 
Sbjct: 546 KKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGD---CKRNGMIPDV 602

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            TY+ +ID   K  R EE  +L  +M+S  L P  V Y  +I  YC+ GR+   L+L E 
Sbjct: 603 YTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELRED 662

Query: 575 MLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M  K        Y  +I+ +     +EEA  +L ++     + +      L++ Y   G 
Sbjct: 663 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQ 722

Query: 633 PLLAYKVAC---RMFNRNLIPDLKLCKKVSERLIL-----EGKSEEADTLMLRFVERGHI 684
            +   KV C    M ++N+ P+     K++  +++     +G   EA  L+    E+G I
Sbjct: 723 MV---KVECLLREMHSKNVHPN-----KITYTVMIGGYARDGNVTEASRLLHEMREKG-I 773

Query: 685 QPKS 688
            P S
Sbjct: 774 VPDS 777



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 226/486 (46%), Gaps = 14/486 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  RG+E     +S L+   ++A ++ +A  VL  M +    PN+++ N  I  L+    
Sbjct: 313 MVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGS 372

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L KA+   + M   G++    TYN LIKGYC   +   A +L+ EM   G + ++ S+ +
Sbjct: 373 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTS 432

Query: 287 VMGYLCKEKRIKEV-----RDLMEKMVNDSNLFHD-------QGRIEEAKELVNQMSQMG 334
           V+  LC               L+  M     L           G+  +A EL  +    G
Sbjct: 433 VICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKG 492

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            + D  T  A+++G C  G+L++  ++ +++   G   + VSY   ++G C N K  EA 
Sbjct: 493 FLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAF 552

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
             ++   ++   P+  TYS+++ GL    K+ EA     +  + G  P     +++I   
Sbjct: 553 MFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGC 612

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+  + +  +K   E ++     N V +  LI  +C+ G L  AL L +DM      P++
Sbjct: 613 CKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNS 672

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            TYT++I  +S   RVEEA  L+ +M  +GL P V  Y  +I  Y ++G++  +  LL +
Sbjct: 673 ATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 732

Query: 575 MLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M SK     +  Y  +I      G + EA ++L ++       D+ T    +  YL +G 
Sbjct: 733 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGG 792

Query: 633 PLLAYK 638
            L A+K
Sbjct: 793 VLQAFK 798



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 26/238 (10%)

Query: 124 ALQFFYWAD-RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYL 182
           A+QF  W D ++     D   Y +M++   K +  +  +++   M    ++     +++L
Sbjct: 586 AIQF--WGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHL 643

Query: 183 MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
           + AY R+G+L  A+ +   M+   ++PN     + I  + + +++ +A   LE M++ G+
Sbjct: 644 IGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGL 703

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
            PNV  Y  LI GY  L ++     L+ EM  K   P+K++Y  ++G   ++        
Sbjct: 704 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD-------- 755

Query: 303 LMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                          G + EA  L+++M + G +PD +TY   + G+ + G + QA K
Sbjct: 756 ---------------GNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFK 798


>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Brachypodium distachyon]
          Length = 684

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/592 (25%), Positives = 247/592 (41%), Gaps = 52/592 (8%)

Query: 91  WSPKLEGELRNLLRSLKPRQICAVLRSQA--DERVALQFFYWADR--------------- 133
           W P+L  E    +  L PR +  VLR  A  D  + ++ + WA R               
Sbjct: 53  WFPRLNSEFAAAMPRLGPRFVVRVLRGAAPLDPHLCVRLYVWASRFGAHFARDASVRRAL 112

Query: 134 -QWRYRHDPIVYYMML-------------EIL-------SKTKLCQGAKRVLRLMARRGI 172
               +R  P V    L             E+L        +  L Q A  V   M R G+
Sbjct: 113 EDALWRRGPAVLSAALVAEVRGCGCEVSEELLRALIASWGRLGLAQYAHEVFVQMPRLGL 172

Query: 173 ECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
                 ++ L+VA  RAG +  A      M      P+    NT +H +     + +ALR
Sbjct: 173 RPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRGIIDEALR 232

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT-VMGYL 291
            + +M+ AGI PNV TY  L+ G+C+  R +DA+ + D M  KG SP++ SY T V G  
Sbjct: 233 LVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTLVHGAF 292

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQ--------GRIEEAKELV---NQMSQMGCIPDVV 340
               R K    L E +  +    H           + E AKE+V    +M+  G + D  
Sbjct: 293 RCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGYLLDNA 352

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
            +  VV+   +  EL     +L      G  P    Y   +  L     S +A   +   
Sbjct: 353 IFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKANHYLKRM 412

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
             +       +Y++V+    + G + +A ++++EM +KG  P  V  N LI    + G +
Sbjct: 413 VLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNV 472

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             AK  ++  +  G   +++ FTSLI G C    L++A    ++M      P+  TY  +
Sbjct: 473 HNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVL 532

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           + AL   G V +A +L+ KM   G+ P   ++   I  +C++ +V+    +   ML    
Sbjct: 533 MHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKARNIFNAMLRLGV 592

Query: 581 C--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
                 YN +I+ LC    ++EA +IL  +  + S A     H+ + S L K
Sbjct: 593 VPDNYTYNSLIKALCDERRIDEAKEILLLMESSGSSATTHHTHLPIVSALTK 644



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/466 (24%), Positives = 210/466 (45%), Gaps = 52/466 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D   Y  ++  + +  +   A R++R M   GI  RP  F+Y M+   +  AG+  +A++
Sbjct: 210 DCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGI--RPNVFTYTMLVDGFCNAGRPEDAVH 267

Query: 198 VLSMMQKAAVAPNLLICNTAIH----------------------------------VLVV 223
           V   M++  V+PN     T +H                                    + 
Sbjct: 268 VFDTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLS 327

Query: 224 GNKLAK-ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
            N++AK  +   ++M   G   +   +  ++        + D   L+D+   KG +P   
Sbjct: 328 KNEMAKEVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFD 387

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQM 330
            Y  V+  L   K   +    +++MV D  L            F   G +++A E++ +M
Sbjct: 388 VYIMVIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEM 447

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
            + G +P++VT+  +++G+ ++G +  AK +L+ +  HG  P+ +++T+ +NGLCH  + 
Sbjct: 448 REKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQL 507

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            +A +  N   E    PNA TY+V+MH L   G +++A D++ +M K G  P     N  
Sbjct: 508 DDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAP 567

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I S CR  K+D A+      L  G   +   + SLI+  C +  ++EA  +L  M     
Sbjct: 568 ILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLMESSGS 627

Query: 511 DPDT-VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
              T  T+  I+ AL+K G+  +A +LM K   + +  +  + RT+
Sbjct: 628 SATTHHTHLPIVSALTKTGQFSKAGQLMNKYNRRNVQLSCGSNRTI 673



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/395 (22%), Positives = 153/395 (38%), Gaps = 77/395 (19%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G  + A E+  QM ++G  P    Y A++    R G +D A    QQM   GC+P+  +Y
Sbjct: 155 GLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTY 214

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              ++G+C  G   EA  ++   E     PN  TY++++ G    G+  +A  V   M +
Sbjct: 215 NTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKE 274

Query: 438 KGFFPTPVEINLLIQSLCR------------------EGKMDGAKKFMQECLNK------ 473
           KG  P       L+    R                        A + M  CL+K      
Sbjct: 275 KGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKE 334

Query: 474 ------------------------GCAVNVVNFT---SLIRGFCQKG---DLEEALSLLD 503
                                    CAV  +  +    L+  F +KG     +  + ++ 
Sbjct: 335 VVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVIK 394

Query: 504 DMYLCKKDPDTVTY----------------TTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            +  CK       Y                  +ID   K G V++A E++ +M  KG++P
Sbjct: 395 SLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLP 454

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKIL 605
            +VT+ T+I  Y ++G V +   +L+ ++          +  +I  LC    L++A    
Sbjct: 455 NLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCF 514

Query: 606 GKVLRTASKADASTCHVLVES-----YLNKGIPLL 635
            ++     + +A T +VL+ +     ++NK I LL
Sbjct: 515 NEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLL 549



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 20/230 (8%)

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           R G    A +V  +M + G  P+    N LI +  R G +D A    Q+    GC  +  
Sbjct: 153 RLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCF 212

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            + +L+ G CQ+G ++EAL L+  M      P+  TYT ++D     GR E+A  +   M
Sbjct: 213 TYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTM 272

Query: 541 LSKGLVPTVVTYRTVIHRYCQ-VGRVEDLLKLLEKM-----------------LSKQKCR 582
             KG+ P   +YRT++H   + +GR +  + L E +                 LSK +  
Sbjct: 273 KEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMA 332

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKA-DASTCHVLVESYLNKG 631
               +V + + S GYL +   I G V+  A K  + S    L++ ++ KG
Sbjct: 333 KEVVEVTKKMNSRGYLLD-NAIFGIVVSCAVKCLELSDLCGLLDDFVKKG 381


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 239/505 (47%), Gaps = 17/505 (3%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           +HD   Y ++  +L+++K+   A  +   +   GI    ++ + L+    +  + R  + 
Sbjct: 107 KHD-FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTIN 165

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   + ++   P+  +   AI   V  + + K L    RM+   I P+V  YN LI G C
Sbjct: 166 VFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLC 225

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND------- 310
              R+ DA +L DEM  +   P  ++Y T++   CK    ++   + E+M  D       
Sbjct: 226 KGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLI 285

Query: 311 ------SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                   LF   G +E+A+ ++ +M  +G +PD  T++ + +G+    + + A  + + 
Sbjct: 286 TFNTLLKGLFK-AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
               G K N  + +  LN LC  GK  +A E++     +   PN + Y+ ++ G  R+G 
Sbjct: 345 AVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L  A   +  M K+G  P  +  N LI+  C  G+M+ A+K + +   KG + +V  +  
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI 464

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI G+ +K + ++   +L +M      P+ V+Y T+I+ L K  ++ EA  +   M  +G
Sbjct: 465 LIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG 524

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAG 602
           + P V  Y  +I   C  G++ED  +  ++ML K  +     YN +I+ L   G L EA 
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584

Query: 603 KILGKVLRTASKADASTCHVLVESY 627
            +L ++ R   K D  T + L+  Y
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISGY 609



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 243/536 (45%), Gaps = 29/536 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I +  +L+ L K  + + A+ VL+ M   G       FS L   YS   K   A+ V   
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
              + V  N   C+  ++ L    K+ KA   L R    G+ PN + YN +I GYC    
Sbjct: 345 AVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +  A   I+ M  +G  PD ++Y  ++   C                       + G +E
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFC-----------------------ELGEME 441

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A++ VN+M   G  P V TY  ++ G+ R  E D+   +L++M  +G  PN VSY   +
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           N LC   K LEA+ +    E+   +P    Y++++ G   +GK+ +A    +EM+KKG  
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
              V  N LI  L   GK+  A+  + E   KG   +V  + SLI G+   G+++  ++L
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
            ++M      P   TY  +I   +K G   E TE +   +S  L P ++ Y  V+H Y  
Sbjct: 622 YEEMKRSGIKPTLKTYHLLISLCTKEGI--ELTERLFGEMS--LKPDLLVYNGVLHCYAV 677

Query: 562 VGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G +E    L ++M+ K     +T YN +I      G L E   ++ ++     + +A T
Sbjct: 678 HGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADT 737

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
            +++V+ +      + AY     M  +  + D+ +  ++   L  E +S+EA+ ++
Sbjct: 738 YNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVI 793



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 204/414 (49%), Gaps = 14/414 (3%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P  F Y  L+    +  ++ +A  +   M    + P+L+  NT I          K+ + 
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
            ERM+   I P+++T+N L+KG      ++DA  ++ EM   G  PD  ++  +      
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331

Query: 294 EKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
            ++ +    + E  V+              N    +G+IE+A+E++ +    G +P+ V 
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y  +++G+CR G+L  A+  ++ M   G KP+ ++Y   +   C  G+   A + +N  +
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
            +  +P+  TY++++ G  R+ +  +  D+++EM   G  P  V    LI  LC+  K+ 
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A+   ++  ++G +  V  +  LI G C KG +E+A     +M     + + VTY T+I
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           D LS  G++ EA +L++++  KGL P V TY ++I  Y   G V+  + L E+M
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 207/456 (45%), Gaps = 29/456 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   + ++ +  S  +  + A  V       G++      S L+ A  + GK+  A  +L
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
                  + PN +I NT I        L  A   +E M+  G+ P+ L YNCLI+ +C+L
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             +++A K +++M LKG SP   +Y  ++G   ++    +  D++++M ++         
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN--------- 488

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                         G +P+VV+Y  ++N  C+  +L +A+ + + M   G  P    Y  
Sbjct: 489 --------------GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G C  GK  +A        ++    N +TY+ ++ GL   GKLSEA D++ E+ +KG
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     N LI      G +       +E    G    +  +  LI   C K  +E   
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTE 653

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            L  +M L    PD + Y  ++   + +G +E+A  L  +M+ K +     TY ++I   
Sbjct: 654 RLFGEMSL---KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLC 593
            +VG++ ++  L+++M +++    A  YN +++  C
Sbjct: 711 LKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHC 746



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 182/399 (45%), Gaps = 45/399 (11%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           EL N+M      P V  Y  +++G C+   ++ A+++  +M      P+ ++Y   ++G 
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259

Query: 385 CHNG---KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           C  G   KS + RE +     E   P+ IT++ ++ GL + G + +A +V++EM   GF 
Sbjct: 260 CKAGNPEKSFKVRERMKADHIE---PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316

Query: 442 P------------------------------TPVEIN-----LLIQSLCREGKMDGAKKF 466
           P                              + V++N     +L+ +LC+EGK++ A++ 
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           +   + KG   N V + ++I G+C+KGDL  A   ++ M      PD + Y  +I    +
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC---QVGRVEDLLKLLEKMLSKQKCRT 583
            G +E A + + KM  KG+ P+V TY  +I  Y    +  +  D+LK +E   +      
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV-V 495

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
           +Y  +I  LC    L EA  +   +            ++L++   +KG    A++ +  M
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             + +  +L     + + L + GK  EA+ L+L    +G
Sbjct: 556 LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/379 (21%), Positives = 158/379 (41%), Gaps = 54/379 (14%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           + A++ +  M  +G+    E ++ L+  Y R  +      +L  M+     PN++   T 
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I+ L  G+KL +A      M+  G++P V  YN LI G C   +I+DA +   EM  KG 
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
             + V+Y T++  L                          G++ EA++L+ ++S+ G  P
Sbjct: 561 ELNLVTYNTLIDGLSM-----------------------TGKLSEAEDLLLEISRKGLKP 597

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP------------------------- 372
           DV TY ++++G+   G + +   + ++M   G KP                         
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFG 657

Query: 373 ------NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
                 + + Y   L+    +G   +A  +     E+    +  TY+ ++ G  + GKL 
Sbjct: 658 EMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 717

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           E   ++ EM  +   P     N++++  C       A  + +E   KG  ++V     L+
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELV 777

Query: 487 RGFCQKGDLEEALSLLDDM 505
            G  ++   +EA  ++ +M
Sbjct: 778 SGLKEEWRSKEAEIVISEM 796



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 133/294 (45%), Gaps = 15/294 (5%)

Query: 156 LCQGAKR-----VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           LC+G+K      V R M  RG+  +   ++ L+      GK+ +A      M K  +  N
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN 563

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           L+  NT I  L +  KL++A   L  +   G+ P+V TYN LI GY     ++  I L +
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYE 623

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL---------FHDQGRIE 321
           EM   G  P   +Y+ ++  LC ++ I+    L  +M    +L         +   G +E
Sbjct: 624 EMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDME 682

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           +A  L  QM +     D  TY +++ G  +VG+L + + ++ +M     +P   +Y   +
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            G C     + A       +E+ +  +    + ++ GL+ E +  EA  V+ EM
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 244/500 (48%), Gaps = 21/500 (4%)

Query: 158 QGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           + A ++L  +  RG  C P   +F+ ++    +  K+  A+ +  +M+K A  PN    N
Sbjct: 70  EDAYKLLERLRERG--CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYN 126

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             I +L +G ++ +A R L+ M+ A + PN+LT N ++   C   ++++A K+ +    +
Sbjct: 127 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 186

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEA 323
           GC+PD V+Y +++  L K+ ++ E   L EKM++  +             F   GR E+ 
Sbjct: 187 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 246

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
            ++  ++ + GC PD+      ++   + GE+++ + + + +  +G  P+  SY+  ++G
Sbjct: 247 HKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHG 306

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           L   G++ E   + +  +++ +  +A  Y+ V+ G  + GK+ +A +++ EM +K   PT
Sbjct: 307 LTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT 366

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
                 ++  L +  ++D A    +E  +KG  +NVV ++SLI GF + G ++EA  +L+
Sbjct: 367 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILE 426

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M      P+  T+ +++DAL K   + EA      M      P   TY  +I+  C+V 
Sbjct: 427 EMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQ 486

Query: 564 RVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           +        + M  KQ        Y  +I  L   G + +A  +  +        DA++ 
Sbjct: 487 KYNKAFVFWQDM-QKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASF 545

Query: 621 HVLVESYLNKGIPLLAYKVA 640
           + L+E   N    + AY+  
Sbjct: 546 NALIEGMSNANRAMEAYQAG 565



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/531 (22%), Positives = 230/531 (43%), Gaps = 48/531 (9%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           ++   + P+ +   + I VL    +L +A     +M+     P    YN +I GY    R
Sbjct: 9   LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 68

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------NLF 314
            +DA KL++ +  +GC P  VS+ +++  L K++++ E   L E M  D+       N+ 
Sbjct: 69  FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNII 128

Query: 315 HDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            D     GR+EEA  ++++M      P+++T   +V+  C+  +L++A K+ +     GC
Sbjct: 129 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 188

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            P+ V+Y + ++GL   G+  EA  +     +     N + Y+ ++      G+  +   
Sbjct: 189 NPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHK 248

Query: 431 VVREMVKK-----------------------------------GFFPTPVEINLLIQSLC 455
           + +E++++                                   GF P     ++LI  L 
Sbjct: 249 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 308

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + G+             +G A++   + +++ GFC+ G + +A  +L++M      P   
Sbjct: 309 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVA 368

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TY  I+D L+K  R++EA  L  +  SKG+   VV Y ++I  + +VGR+++   +LE+M
Sbjct: 369 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 428

Query: 576 LSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           + K      Y  N +++ L     + EA      +       +  T  +L+         
Sbjct: 429 MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKY 488

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
             A+     M  + L+P++     +   L   G   +A +L  RF   G I
Sbjct: 489 NKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGI 539



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 182/378 (48%), Gaps = 19/378 (5%)

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL----------- 313
           A K   E+  +G  PD VSY +++  LCK  R+ E  +L  +M  + ++           
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 314 -FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
            +   GR E+A +L+ ++ + GCIP VV++ +++    +  ++D+A  + + M     +P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEP 120

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N+ +Y   ++ LC  G+  EA  +++  E     PN +T ++++  L +  KL EA  + 
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
               ++G  P  V    LI  L ++G++D A +  ++ L+ G   N V +TSLIR F   
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G  E+   +  ++      PD     T +D + K G VE+   +   + S G +P V +Y
Sbjct: 241 GRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 300

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT----AYNQVIENLCSFGYLEEAGKILGKV 608
             +IH   + G+  +   +   M  KQ+       AYN V++  C  G + +A +IL ++
Sbjct: 301 SILIHGLTKAGQARETSNIFHAM--KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 358

Query: 609 LRTASKADASTCHVLVES 626
                +   +T   +V+ 
Sbjct: 359 KEKCVQPTVATYGAIVDG 376



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/396 (22%), Positives = 176/396 (44%), Gaps = 23/396 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K      A R+   M   G    P  ++ L+  +   G+  +   + 
Sbjct: 191 DCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIF 250

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + +    P+L + NT +  +    ++ K     E ++  G  P+V +Y+ LI G    
Sbjct: 251 KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKA 310

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            + ++   +   M  +G + D  +Y  V+   CK                        G+
Sbjct: 311 GQARETSNIFHAMKQQGFALDARAYNAVVDGFCK-----------------------SGK 347

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           + +A E++ +M +    P V TY A+V+G  ++  LD+A  + ++    G + N V Y++
Sbjct: 348 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 407

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G    G+  EA  ++    ++  TPN  T++ ++  L +  +++EA    + M +  
Sbjct: 408 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 467

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     ++LI  LCR  K + A  F Q+   +G   NVV +T++I G  + G++ +A 
Sbjct: 468 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 527

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
           SL +        PD  ++  +I+ +S   R  EA +
Sbjct: 528 SLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 144/321 (44%), Gaps = 30/321 (9%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R + +  D   Y +++  L+K    +    +   M ++G      A++ ++  + ++GK+
Sbjct: 289 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV 348

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A  +L  M++  V P +      +  L   ++L +A    E  +  GI  NV+ Y+ L
Sbjct: 349 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 408

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I G+  + RI +A  +++EM  KG +P+  ++ +++  L K + I               
Sbjct: 409 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN-------------- 454

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                    EA      M +M C P+  TY+ ++NG CRV + ++A    Q M   G  P
Sbjct: 455 ---------EALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVP 505

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N V+YT  ++GL   G   +A  +    +     P+A +++ ++ G+    +  EA    
Sbjct: 506 NVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA---- 561

Query: 433 REMVKKGFFPTPVEINLLIQS 453
               + G+  T + ++ LI S
Sbjct: 562 ---YQAGWLDTTMRLDCLIFS 579



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 167/367 (45%), Gaps = 6/367 (1%)

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A +  +++   G  PD V+YT+++   C+ G L +A+++  QM      P   +Y   + 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           G    G+  +A +++    E    P+ ++++ ++  L ++ K+ EA  +  E++KK   P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
                N++I  LC  G+++ A + + E  +     N++    ++   C+   LEEA  + 
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
           +       +PD VTY ++ID L K G+V+EA  L  KML  G     V Y ++I  +   
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 240

Query: 563 GRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
           GR ED  K+ ++++ ++ C+   T  N  ++ +   G +E+   I   +       D  +
Sbjct: 241 GRKEDGHKIFKELI-RRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 299

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
             +L+      G       +   M  +    D +    V +     GK  +A  ++    
Sbjct: 300 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359

Query: 680 ERGHIQP 686
           E+  +QP
Sbjct: 360 EK-CVQP 365


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 245/499 (49%), Gaps = 21/499 (4%)

Query: 158 QGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           + A ++L  +  RG  C P   +F+ ++    +  K+  A+ +  +M+K A  PN    N
Sbjct: 336 EDAYKLLERLRERG--CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYN 392

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             I +L +G ++ +A R L+ M+ A + PN+LT N ++   C   ++++A K+ +    +
Sbjct: 393 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 452

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEA 323
           GC+PD V+Y +++  L K+ ++ E   L EKM++  +             F   GR E+ 
Sbjct: 453 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 512

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
            ++  ++ + GC PD+      ++   + GE+++ + + + +  +G  P+  SY+  ++G
Sbjct: 513 HKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHG 572

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           L   G++ E   + +  +++ +  +A  Y+ V+ G  + GK+ +A +++ EM +K   PT
Sbjct: 573 LTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT 632

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
                 ++  L +  ++D A    +E  +KG  +NVV ++SLI GF + G ++EA  +L+
Sbjct: 633 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILE 692

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M      P+  T+ +++DAL K   + EA      M      P   TY  +I+  C+V 
Sbjct: 693 EMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQ 752

Query: 564 RVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           +        + M  KQ        Y  +I  L   G + +A  +  +        DA++ 
Sbjct: 753 KYNKAFVFWQDM-QKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASF 811

Query: 621 HVLVESYLNKGIPLLAYKV 639
           + L+E   N    + AY+V
Sbjct: 812 NALIEGMSNANRAMEAYQV 830



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 144/603 (23%), Positives = 263/603 (43%), Gaps = 62/603 (10%)

Query: 80  EVCRLIELRSAWSPKLEGELRNLLRSLKPRQ--ICAVLRSQADERVALQFFYWADRQWRY 137
           E+ RL+     W+P L   + +   S  P    + +VLRS  +  +A  FF  A      
Sbjct: 46  ELLRLLSAAPTWTPDLARAVSSTF-SASPTADVVISVLRSIRNPSLAAPFFLLASSSSAS 104

Query: 138 RHDPI---VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
              P+    Y+ +L  L         ++VL  MA  G     +A ++L  A  RA +L +
Sbjct: 105 APHPLPADAYHAVLPFLHHD--LAALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDD 162

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+  +++M++    P        I  L    +  +AL  L +MQ  G    V  +  L++
Sbjct: 163 AVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVR 222

Query: 255 GYCDLHRIKDAIKLID-----------------------------------EMPLKGCSP 279
                 ++ DA+ L+D                                   E+  +G  P
Sbjct: 223 ALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKP 282

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELV 327
           D VSY +++  LCK  R+ E  +L  +M  + ++            +   GR E+A +L+
Sbjct: 283 DDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLL 342

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            ++ + GCIP VV++ +++    +  ++D+A  + + M     +PN+ +Y   ++ LC  
Sbjct: 343 ERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLG 401

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G+  EA  +++  E     PN +T ++++  L +  KL EA  +     ++G  P  V  
Sbjct: 402 GRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTY 461

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             LI  L ++G++D A +  ++ L+ G   N V +TSLIR F   G  E+   +  ++  
Sbjct: 462 CSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIR 521

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               PD     T +D + K G VE+   +   + S G +P V +Y  +IH   + G+  +
Sbjct: 522 RGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARE 581

Query: 568 LLKLLEKMLSKQKCRT----AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
              +   M  KQ+       AYN V++  C  G + +A +IL ++     +   +T   +
Sbjct: 582 TSNIFHAM--KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAI 639

Query: 624 VES 626
           V+ 
Sbjct: 640 VDG 642



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/542 (21%), Positives = 251/542 (46%), Gaps = 48/542 (8%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R+ ++R     Y +++  L++ +  + A  +LR M   G E     F+ L+ A +R G++
Sbjct: 171 RRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQV 230

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN------- 245
            +A+ ++  ++ + + P++++ N  I        +  A +F   ++  G+ P+       
Sbjct: 231 ADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSM 290

Query: 246 ----------------------------VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
                                          YN +I GY    R +DA KL++ +  +GC
Sbjct: 291 IWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGC 350

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------NLFHDQ----GRIEEAKEL 326
            P  VS+ +++  L K++++ E   L E M  D+       N+  D     GR+EEA  +
Sbjct: 351 IPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRI 410

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           +++M      P+++T   +V+  C+  +L++A K+ +     GC P+ V+Y + ++GL  
Sbjct: 411 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 470

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            G+  EA  +     +     N + Y+ ++      G+  +   + +E++++G  P    
Sbjct: 471 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTL 530

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +N  +  + + G+++  +   ++  + G   +V +++ LI G  + G   E  ++   M 
Sbjct: 531 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 590

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                 D   Y  ++D   K+G+V +A E++ +M  K + PTV TY  ++    ++ R++
Sbjct: 591 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 650

Query: 567 DLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           +   L E+  SK  +     Y+ +I+     G ++EA  IL ++++     +  T + L+
Sbjct: 651 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 710

Query: 625 ES 626
           ++
Sbjct: 711 DA 712



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/398 (22%), Positives = 177/398 (44%), Gaps = 23/398 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K      A R+   M   G    P  ++ L+  +   G+  +   + 
Sbjct: 457 DCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIF 516

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + +    P+L + NT +  +    ++ K     E ++  G  P+V +Y+ LI G    
Sbjct: 517 KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKA 576

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            + ++   +   M  +G + D  +Y  V+   CK                        G+
Sbjct: 577 GQARETSNIFHAMKQQGFALDARAYNAVVDGFCK-----------------------SGK 613

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           + +A E++ +M +    P V TY A+V+G  ++  LD+A  + ++    G + N V Y++
Sbjct: 614 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 673

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G    G+  EA  ++    ++  TPN  T++ ++  L +  +++EA    + M +  
Sbjct: 674 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 733

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     ++LI  LCR  K + A  F Q+   +G   NVV +T++I G  + G++ +A 
Sbjct: 734 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 793

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           SL +        PD  ++  +I+ +S   R  EA ++ 
Sbjct: 794 SLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVF 831



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/376 (22%), Positives = 170/376 (45%), Gaps = 16/376 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRN 194
           +  +P+VY  ++         +   ++ + + RRG  C+P+    +  M    +AG++  
Sbjct: 489 HNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRG--CKPDLTLLNTYMDCVFKAGEVEK 546

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
              +   ++     P++   +  IH L    +  +       M+  G   +   YN ++ 
Sbjct: 547 GRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVD 606

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK-------- 306
           G+C   ++  A ++++EM  K   P   +Y  ++  L K  R+ E   L E+        
Sbjct: 607 GFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIEL 666

Query: 307 -MVNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
            +V  S+L   F   GRI+EA  ++ +M + G  P+V T+ ++++   +  E+++A    
Sbjct: 667 NVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCF 726

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           Q M    C PNT +Y+  +NGLC   K  +A       +++   PN +TY+ ++ GL + 
Sbjct: 727 QSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKV 786

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G +++A  +       G  P     N LI+ +    +   A +  +E   +GC +N+ + 
Sbjct: 787 GNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSC 846

Query: 483 TSLIRGFCQKGDLEEA 498
            SL+    +   LE+A
Sbjct: 847 ISLLDALNKSECLEQA 862



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 138/307 (44%), Gaps = 23/307 (7%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R + +  D   Y +++  L+K    +    +   M ++G      A++ ++  + ++GK+
Sbjct: 555 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV 614

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A  +L  M++  V P +      +  L   ++L +A    E  +  GI  NV+ Y+ L
Sbjct: 615 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 674

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I G+  + RI +A  +++EM  KG +P+  ++ +++  L K + I               
Sbjct: 675 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN-------------- 720

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                    EA      M +M C P+  TY+ ++NG CRV + ++A    Q M   G  P
Sbjct: 721 ---------EALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVP 771

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N V+YT  ++GL   G   +A  +    +     P+A +++ ++ G+    +  EA  V 
Sbjct: 772 NVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVF 831

Query: 433 REMVKKG 439
            E   +G
Sbjct: 832 EETRLRG 838



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 172/373 (46%), Gaps = 6/373 (1%)

Query: 313 LFHDQGRIEEAKELVNQMSQMG-CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           L HD   +E+  E   +M+ +G  +P+      +     R   LD A   +  M     +
Sbjct: 121 LHHDLAALEKVLE---EMAVLGYGLPNQAC-AHLAAALVRARRLDDAVLAVAVMRRLKFR 176

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P   +YT  +  L    +   A E++   +E  +      ++ ++  L REG++++A  +
Sbjct: 177 PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 236

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           V E+      P  V  N+ I    + G +D A KF  E   +G   + V++TS+I   C+
Sbjct: 237 VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCK 296

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G L EA  L   M   +  P    Y T+I      GR E+A +L+ ++  +G +P+VV+
Sbjct: 297 AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVS 356

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA-YNQVIENLCSFGYLEEAGKILGKVLR 610
           + +++    +  +V++ L L E M    +  ++ YN +I+ LC  G +EEA +IL ++  
Sbjct: 357 FNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEH 416

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
            +   +  T +++V+          AYK+      R   PD      + + L  +G+ +E
Sbjct: 417 ASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDE 476

Query: 671 ADTLMLRFVERGH 683
           A  L  + ++ GH
Sbjct: 477 AYRLFEKMLDAGH 489


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 223/465 (47%), Gaps = 32/465 (6%)

Query: 167 MARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           MA  G  C P+  SY  ++    + G +  A      M    V+P+ +  N+ I  L   
Sbjct: 1   MADDG-RCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKA 59

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             + +A+  L  M    + PN  TYN ++ GYC   + + AI +  +M   G  PD V+Y
Sbjct: 60  QAMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTY 115

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            ++M YLCK                        G+  EA+++ + M + G  PD+ TY  
Sbjct: 116 NSLMDYLCK-----------------------NGKCTEARKIFDSMVKRGLKPDITTYGT 152

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++G+   G L +   +L  M  +G + +   +   +       K  E   + +   ++ 
Sbjct: 153 LLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQG 212

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
            TPNA+ Y  V+ GL + G+L +A     +M+ KG  P  V    LI +LC   K + A+
Sbjct: 213 LTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAE 272

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           + + E L++G   N+V F +++   C++G + E+  L D +     +PD +TY+T+ID  
Sbjct: 273 ELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGY 332

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCR 582
              G+++ A +L+  M+S GL P  VTY T+I+ YC++ R+ED L L ++M S       
Sbjct: 333 CLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDI 392

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
             YN ++  L        A ++  ++  + ++ + ST ++++  +
Sbjct: 393 ITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDF 437



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 165/312 (52%), Gaps = 12/312 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K   C  A+++   M +RG++     +  L+  Y+  G L     +L
Sbjct: 111 DVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLL 170

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           ++M +  +  +  + N  I       K+ + +    +M+  G+TPN + Y  +I G C L
Sbjct: 171 ALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKL 230

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK----EKRIKEVRDLMEKMVNDSNLFH 315
            R+ DA+   ++M  KG +P+ V Y +++  LC     EK  + + +++++ +N + +F 
Sbjct: 231 GRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFF 290

Query: 316 D--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +        +GR+ E+K+L + +  +G  PDV+TY+ +++G+C  G++D A K+L  M  
Sbjct: 291 NTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVS 350

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G KP++V+Y+  +NG C   +  +A  +    E     P+ ITY++++HGL R  + + 
Sbjct: 351 VGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAA 410

Query: 428 ACDVVREMVKKG 439
           A ++   + + G
Sbjct: 411 AKELYARITESG 422



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 85/159 (53%), Gaps = 6/159 (3%)

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
           C  +VV++ ++I G  ++GD+++A     +M   +  PD VTY +II ALSK   ++ A 
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
           E++  M+    +P   TY +++H YC  G+ E  + +  KM S   +     YN +++ L
Sbjct: 67  EVLTVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           C  G   EA KI   +++   K D +T   L+  Y +KG
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKG 161



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 116/271 (42%), Gaps = 25/271 (9%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           ICA  + +  + V L F     RQ     + + Y  +++ L K      A      M  +
Sbjct: 189 ICAYTKQEKVDEVVLVFSKM--RQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDK 246

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G+      ++ L+ A     K   A  ++  +    + PN++  NT +  L    ++ ++
Sbjct: 247 GLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIES 306

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
            +  + +   G+ P+V+TY+ LI GYC   ++  A+KL+  M   G  PD V+Y T++  
Sbjct: 307 KKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLING 366

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            CK              +N         R+E+A  L  +M   G  PD++TY  +++G  
Sbjct: 367 YCK--------------IN---------RMEDALALFKEMESNGVNPDIITYNIILHGLF 403

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           R      AK++  ++   G +    +Y   L
Sbjct: 404 RTRRTAAAKELYARITESGTQLELSTYNIIL 434



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 2/171 (1%)

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD V+Y TIID L K G V++A     +ML + + P  VTY ++I    +   ++  +++
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 572 LEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           L  M+    C T YN ++   CS G  E+A  I  K+     + D  T + L++     G
Sbjct: 69  LTVMVMPN-CFT-YNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNG 126

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
               A K+   M  R L PD+     +      +G   E   L+   V+ G
Sbjct: 127 KCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNG 177


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 248/549 (45%), Gaps = 69/549 (12%)

Query: 105 SLKPRQICAVLRSQA---DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAK 161
           S KP  + +VL S          L FF W+  Q       + +  ++ +LS  KL     
Sbjct: 48  SAKPNLLISVLSSNTLSNKSNTLLSFFKWS--QTHLSVTSLSHLPLISLLSHQKLSDAKS 105

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
                               L+ A+  A +     + L       V    +I +T+I   
Sbjct: 106 --------------------LLTAFISADRTHLLHHHLLHSPFKKVQSLRVILDTSIGAY 145

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG----------------------YCDL 259
           V  N+   A +   RM+   + PN+LT N LI                        +   
Sbjct: 146 VSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVK 205

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMG--YLCK----EKRIKEVRDLMEK-----MV 308
           +++ +AI LI +M    C PD  SY T++   +LC+    ++ I ++ +L+E       +
Sbjct: 206 NKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQI 265

Query: 309 NDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             + + H    +G++E+A +  N+M +    PD+ T   ++ G C  G LD A K+    
Sbjct: 266 TYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTW 325

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR-REGK 424
              G   + V+Y   ++GLC  G+  EA +++   EE+   P+  TY+ ++  L   EG+
Sbjct: 326 ISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQ 385

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + +A     +MV+K F P     N+L++ LC EG +D A K     ++KG A++ V + +
Sbjct: 386 VEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNT 445

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKD---PDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +I G C++G  EEA  LL +M   +K+   PD  TY TII    + G+VE+A +   KM+
Sbjct: 446 IISGLCKEGRFEEAFDLLAEME--EKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMV 503

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLE 599
            K   P + T   ++   C+ G +   LKL    +SK K   A  YN +I  LC  G  E
Sbjct: 504 EKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFE 563

Query: 600 EAGKILGKV 608
           EA  +L ++
Sbjct: 564 EAFDLLAEM 572



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 198/389 (50%), Gaps = 19/389 (4%)

Query: 170 RGIECRPEAFSYLMVA----YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
           +   C P+  SY  +       R+GK   ++  L+ + ++ + P+ +  NT IH      
Sbjct: 219 KDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREG 278

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           ++ KA +F  +M      P++ T N L++G C    + +A+KL +    KG + D V+Y 
Sbjct: 279 QVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYN 338

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDS-------------NLFHDQGRIEEAKELVNQMSQ 332
           T++  LCKE R +E  DL+ +M                  L   +G++E+A +  N+M +
Sbjct: 339 TIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVE 398

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
               PD+ T   ++ G C  G LD A K+       G   + V+Y   ++GLC  G+  E
Sbjct: 399 KSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEE 458

Query: 393 AREMINTSEEE-WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           A +++   EE+    P+  TY+ ++ G  REG++ +A     +MV+K F P     N+L+
Sbjct: 459 AFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILL 518

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
           + LCREG +  A K     ++KG A++ V + ++I G C++G  EEA  LL +M   K  
Sbjct: 519 RGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLG 578

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKM 540
           PD  TY  I+ AL+  GR+ EA E M K+
Sbjct: 579 PDCYTYNAILCALADAGRM-EAEEFMSKI 606



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 233/505 (46%), Gaps = 39/505 (7%)

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
           +  PNLLI  + +    + NK    L F +  Q   ++   L++  LI       ++ DA
Sbjct: 48  SAKPNLLI--SVLSSNTLSNKSNTLLSFFKWSQ-THLSVTSLSHLPLI-SLLSHQKLSDA 103

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
             L+        S D+             K+++ +R +++  +     +    R   A +
Sbjct: 104 KSLLTAF----ISADRTHLLHHHLLHSPFKKVQSLRVILDTSIGA---YVSCNRPHHAAQ 156

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRV----------------------GELDQAKKMLQ 363
           + N+M ++   P+++T   ++N   R                        +L +A  ++ 
Sbjct: 157 IFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAIGLIG 216

Query: 364 QMYHHGCKPNTVSYTAFLN--GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           +M    C P+  SY   L+   LC +GK+ ++ + +N   E    P+ ITY+ ++HG  R
Sbjct: 217 KMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCR 276

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           EG++ +A     +MV+K F P     N+L++ LC EG +D A K     ++KG A++ V 
Sbjct: 277 EGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVT 336

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS-KNGRVEEATELMMKM 540
           + ++I G C++G  EEA  LL +M   K  PD  TY  I+ AL+   G+VE+A +   KM
Sbjct: 337 YNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKM 396

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYL 598
           + K   P + T   ++   C  G +++ LKL    +SK K   A  YN +I  LC  G  
Sbjct: 397 VEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRF 456

Query: 599 EEAGKILGKV-LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
           EEA  +L ++  +     D +T + ++  Y  +G    A++   +M  ++  PDL  C  
Sbjct: 457 EEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNI 516

Query: 658 VSERLILEGKSEEADTLMLRFVERG 682
           +   L  EG   +A  L   ++ +G
Sbjct: 517 LLRGLCREGMLVKALKLFNTWISKG 541



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 149/339 (43%), Gaps = 26/339 (7%)

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
            A ++  +M     KPN ++    +N L               S+       AI  +V+ 
Sbjct: 153 HAAQIFNRMKRLHLKPNLLTRNTLINALVRY-----------PSKPSVCLSKAIFTNVIK 201

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL--CREGKMDGAKKFMQECLNKG 474
            G++   KLSEA  ++ +M     FP     N ++  L  CR GK D +   + E L  G
Sbjct: 202 FGVK--NKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESG 259

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              + + + ++I G+C++G +E+A    + M      PD  T   ++  L   G ++ A 
Sbjct: 260 LVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNAL 319

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ---KCRTAYNQVIEN 591
           +L    +SKG     VTY T+I   C+ GR E+   LL +M  K+    C T YN +   
Sbjct: 320 KLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYT-YNAI--- 375

Query: 592 LCSF----GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           LC+     G +E+A +   K++  + K D  TC++L+     +G+   A K+     ++ 
Sbjct: 376 LCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKG 435

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
              D      +   L  EG+ EEA  L+    E+  + P
Sbjct: 436 KAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVP 474



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 2/169 (1%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMA-RRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           D + Y  ++  L K    + A  +L  M  + G+      ++ +++ Y R G++  A   
Sbjct: 439 DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQF 498

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
            + M + +  P+L  CN  +  L     L KAL+        G   + +TYN +I G C 
Sbjct: 499 RNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCK 558

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
             R ++A  L+ EM  K   PD  +Y  ++  L    R+ E  + M K+
Sbjct: 559 EGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRM-EAEEFMSKI 606


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/561 (24%), Positives = 249/561 (44%), Gaps = 31/561 (5%)

Query: 132 DRQWRYRH---------DPIVYYMMLEILSKTKLCQGAKRVLRLMAR-RGIECRPEAFSY 181
           D  W++ H         D + Y  M+ +L K      A  +   M + R + C   A++ 
Sbjct: 285 DMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPC-AYAYNT 343

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           +++ Y  AGK   A  +L   +     P+++  N  +  L    +L +ALR  E M+   
Sbjct: 344 MIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KD 402

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             PN+ TYN LI   C    ++ A K+ D M   G  P+ ++   ++  LCK K++ E  
Sbjct: 403 AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEAC 462

Query: 302 DLMEKMVN-----DSNLF-------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            + E M +     D   F         QGR+++A  L  QM     IP+ V YT+++  F
Sbjct: 463 SIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSF 522

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
            + G  +   K+ ++M H GC P+     A+++ +   G++ + R +    +   + P+ 
Sbjct: 523 FKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDV 582

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           ++YS+++HGL + G   E  ++   M ++G        N  I   C+ GK++ A + ++E
Sbjct: 583 MSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEE 642

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              KG    VV + S+I G  +   L+EA  L ++      + + V Y+++ID   K GR
Sbjct: 643 MKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGR 702

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQ 587
           ++EA  +M +++ KGL P V T+  ++    +   + + L   + M  L        Y+ 
Sbjct: 703 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSI 762

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I  LC      +A     ++ +   K +  T   ++      G    A  +  R     
Sbjct: 763 LINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANG 822

Query: 648 LIPDLKLCKKVSERLILEGKS 668
            +PD       S   I+EG S
Sbjct: 823 GVPD-----SASYNAIIEGLS 838



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/504 (24%), Positives = 223/504 (44%), Gaps = 52/504 (10%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P   +Y  ++    + G+L  A+     M+K A APNL   N  I +L    ++  A 
Sbjct: 369 CIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAF 427

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
           +  + M+ AG+ PNV+T N +I   C   ++ +A  + + M  K CSPD+V++ +++  L
Sbjct: 428 KVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGL 487

Query: 292 CKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGC---- 335
            K+ R+ +   L E+M++   +            F   GR E+  ++  +M   GC    
Sbjct: 488 GKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDL 547

Query: 336 -------------------------------IPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                                          IPDV++Y+ +++G  + G   +  ++   
Sbjct: 548 RLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYA 607

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   GC  +T +Y  F++G C +GK  +A +++   + +   P  +TY  V+ GL +  +
Sbjct: 608 MKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDR 667

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L EA  +  E    G     V  + LI    + G++D A   M+E + KG   NV  +  
Sbjct: 668 LDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 727

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L+    +  ++ EAL    +M   K  P+ +TY+ +I+ L +  +  +A     +M  +G
Sbjct: 728 LLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQG 787

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAG 602
           L P  +TY T+I    + G + +   L E+  +        +YN +IE L       EA 
Sbjct: 788 LKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAY 847

Query: 603 KILGKVLRTASKADASTCHVLVES 626
           KI  +           TC  L+++
Sbjct: 848 KIFEETRMKGCNIHTKTCIALLDA 871



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 223/491 (45%), Gaps = 23/491 (4%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y +++++L K    + A +V   M   G+       + ++    +A KL  A  +   M
Sbjct: 409 TYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGM 468

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
                +P+ +   + I  L    ++  A R  E+M  +   PN + Y  LIK +    R 
Sbjct: 469 NHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRK 528

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNL 313
           +D  K+  EM  +GCSPD       M  + K     + R L E++         ++ S L
Sbjct: 529 EDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSIL 588

Query: 314 FHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            H     G   E  EL   M + GC+ D   Y   ++GFC+ G++++A ++L++M   G 
Sbjct: 589 IHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGR 648

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P  V+Y + ++GL    +  EA  +   ++      N + YS ++ G  + G++ EA  
Sbjct: 649 QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYL 708

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           ++ E+++KG  P     N L+ +L +  +++ A    Q   N     N + ++ LI G C
Sbjct: 709 IMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLC 768

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +     +A     +M      P+T+TYTT+I  L+K G + EA+ L  +  + G VP   
Sbjct: 769 RVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSA 828

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKM------LSKQKCRTAYNQVIENLCSFGYLEEAGKI 604
           +Y  +I       R  +  K+ E+       +  + C    + + ++ C    LE+A  I
Sbjct: 829 SYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDEC----LEQAA-I 883

Query: 605 LGKVLRTASKA 615
           +G VLR  +K+
Sbjct: 884 VGAVLREIAKS 894



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 139/608 (22%), Positives = 244/608 (40%), Gaps = 62/608 (10%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWR 136
           +V +VC+++E    W P +E  L   + S K   +  VLR   D   A+ +F W +R+  
Sbjct: 65  VVDDVCKILE-SGNWGPDVENALSLFVESPKTDLVIGVLRRAKDVNQAISYFRWTERK-- 121

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
                          +   LC                  PEA+  L++  ++  K     
Sbjct: 122 ---------------TDQALC------------------PEAYDSLLLVMAKNVKFDYFE 148

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M  A   P+   C   I   +  NKL +    ++ M+     P    Y  LI   
Sbjct: 149 QILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGAL 208

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
             +      + L  +M   G       + TV+    +E R+     L+++M   SN  H 
Sbjct: 209 SSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEM--KSNCLH- 265

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
                                D+V Y   ++ F + G++D A K   ++  HG  P+ V+
Sbjct: 266 --------------------ADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVT 305

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YT+ +  LC   +  EA E+    E+    P A  Y+ ++ G    GK  EA  ++    
Sbjct: 306 YTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQK 365

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            +G  P+ +  N ++  L ++G++  A +  +E + K  A N+  +  LI   C+ G++E
Sbjct: 366 ARGCIPSVIAYNCILTCLGKKGRLGEALRTFEE-MKKDAAPNLSTYNVLIDMLCKAGEVE 424

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            A  + D M      P+ +T   +ID L K  +++EA  +   M  K   P  VT+ ++I
Sbjct: 425 AAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLI 484

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASK 614
               + GRV+D  +L E+ML   K   A  Y  +I++    G  E+  KI  +++     
Sbjct: 485 DGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCS 544

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            D    +  ++     G       +   + +R  IPD+     +   L+  G + E   L
Sbjct: 545 PDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYEL 604

Query: 675 MLRFVERG 682
                E+G
Sbjct: 605 FYAMKEQG 612



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 71/165 (43%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           ++Y  +++   K      A  ++  + ++G+      ++ L+ A  +A ++  A+     
Sbjct: 688 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQN 747

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+     PN +  +  I+ L    K  KA  F + MQ  G+ PN +TY  +I G      
Sbjct: 748 MKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGN 807

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           I +A  L +     G  PD  SY  ++  L   +R  E   + E+
Sbjct: 808 IAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEE 852


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 250/517 (48%), Gaps = 27/517 (5%)

Query: 158 QGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           + A ++L  +  RG  C P   +F+ ++    +  K+  A+ +  +M+K A  PN    N
Sbjct: 202 EDAYKLLERLRERG--CIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYN 258

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             I +L +G ++ +A R L+ M+ A + PN+LT N ++   C   ++++A K+ +    +
Sbjct: 259 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 318

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEA 323
           GC+PD V+Y +++  L K+ ++ E   L EKM++  +             F   GR E+ 
Sbjct: 319 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 378

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
            ++  ++ + GC PD+      ++   + GE+++ + + + +  +G  P+  SY+  ++G
Sbjct: 379 HKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHG 438

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           L   G++ E   + +  +++ +  +A  Y+ V+ G  + GK+ +A +++ EM +K   PT
Sbjct: 439 LTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT 498

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
                 ++  L +  ++D A    +E  +KG  +NVV ++SLI GF + G ++EA  +L+
Sbjct: 499 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILE 558

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M      P+  T+ +++DAL K   + EA      M      P   TY  +I+  C+V 
Sbjct: 559 EMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQ 618

Query: 564 RVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           +        + M  KQ        Y  +I  L   G + +A  +  +        DA++ 
Sbjct: 619 KYNKAFVFWQDM-QKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASF 677

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRN------LIPD 651
           + L+E   N    + AY+      + +      L+PD
Sbjct: 678 NALIEGMSNANRAMEAYQTTVYQLSSSSCSWNFLVPD 714



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 135/635 (21%), Positives = 269/635 (42%), Gaps = 83/635 (13%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R+ ++R     Y +++  L++ +  + A  +LR M   G E     F+ L+ A +R G++
Sbjct: 37  RRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQV 96

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN------- 245
            +A+ ++  ++ + + P++++ N  I        +  A +F   ++  G+ P+       
Sbjct: 97  ADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSM 156

Query: 246 ----------------------------VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
                                          YN +I GY    R +DA KL++ +  +GC
Sbjct: 157 IWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGC 216

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------NLFHDQ----GRIEEAKEL 326
            P  VS+ +++  L K++++ E   L E M  D+       N+  D     GR+EEA  +
Sbjct: 217 IPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRI 276

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           +++M      P+++T   +V+  C+  +L++A K+ +     GC P+ V+Y + ++GL  
Sbjct: 277 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 336

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK-------- 438
            G+  EA  +     +     N + Y+ ++      G+  +   V +E++++        
Sbjct: 337 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTL 396

Query: 439 ---------------------------GFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
                                      GF P     ++LI  L + G+            
Sbjct: 397 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 456

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            +G A++   + +++ GFC+ G + +A  +L++M      P   TY  I+D L+K  R++
Sbjct: 457 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 516

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVI 589
           EA  L  +  SKG+   VV Y ++I  + +VGR+++   +LE+M+ K      Y  N ++
Sbjct: 517 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 576

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           + L     + EA      +       +  T  +L+           A+     M  + L+
Sbjct: 577 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 636

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           P++     +   L   G   +A +L  RF   G I
Sbjct: 637 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGI 671



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 231/482 (47%), Gaps = 21/482 (4%)

Query: 163 VLRLMARRGIECRP--EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
           VL +   R ++ RP   A++ L+ A + A +   A+ +L  MQ+      + +  T +  
Sbjct: 30  VLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRA 89

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
           L    ++A AL  ++ ++ + + P+++ YN  I  +     +  A K   E+  +G  PD
Sbjct: 90  LAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPD 149

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVN 328
            VSY +++  LCK  R+ E  +L  +M  + ++            +   GR E+A +L+ 
Sbjct: 150 DVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLE 209

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           ++ + GCIP VV++ +++    +  ++D+A  + + M     +PN+ +Y   ++ LC  G
Sbjct: 210 RLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGG 268

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +  EA  +++  E     PN +T ++++  L +  KL EA  +     ++G  P  V   
Sbjct: 269 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 328

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            LI  L ++G++D A +  ++ L+ G   N V +TSLIR F   G  E+   +  ++   
Sbjct: 329 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRR 388

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD     T +D + K G VE+   +   + S G +P V +Y  +IH   + G+  + 
Sbjct: 389 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 448

Query: 569 LKLLEKMLSKQKCRT----AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
             +   M  KQ+       AYN V++  C  G + +A +IL ++     +   +T   +V
Sbjct: 449 SNIFHAM--KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 506

Query: 625 ES 626
           + 
Sbjct: 507 DG 508



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 196/436 (44%), Gaps = 15/436 (3%)

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFH 315
           R+ DA+  +  M      P   +Y  ++G L + +R +   +L+ +M         +LF 
Sbjct: 25  RLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFT 84

Query: 316 D-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
                   +G++ +A  LV+++      PD+V Y   ++ F + G +D A K   ++   
Sbjct: 85  TLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQ 144

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G KP+ VSYT+ +  LC  G+  EA E+    E E   P A  Y+ ++ G    G+  +A
Sbjct: 145 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 204

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             ++  + ++G  P+ V  N ++  L ++ K+D A     E + K    N   +  +I  
Sbjct: 205 YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDM 263

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C  G +EEA  +LD+M      P+ +T   ++D L K  ++EEA ++      +G  P 
Sbjct: 264 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 323

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILG 606
            VTY ++I    + G+V++  +L EKML          Y  +I N    G  E+  K+  
Sbjct: 324 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFK 383

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
           +++R   K D +  +  ++     G       +   + +   +PD++    +   L   G
Sbjct: 384 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 443

Query: 667 KSEEADTLMLRFVERG 682
           ++ E   +     ++G
Sbjct: 444 QARETSNIFHAMKQQG 459



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 179/403 (44%), Gaps = 23/403 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++ L K      A R+   M   G    P  ++ L+  +   G+  +   V 
Sbjct: 323 DCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVF 382

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             + +    P+L + NT +  +    ++ K     E ++  G  P+V +Y+ LI G    
Sbjct: 383 KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKA 442

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            + ++   +   M  +G + D  +Y  V+   CK                        G+
Sbjct: 443 GQARETSNIFHAMKQQGFALDARAYNAVVDGFCK-----------------------SGK 479

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           + +A E++ +M +    P V TY A+V+G  ++  LD+A  + ++    G + N V Y++
Sbjct: 480 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 539

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++G    G+  EA  ++    ++  TPN  T++ ++  L +  +++EA    + M +  
Sbjct: 540 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK 599

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     ++LI  LCR  K + A  F Q+   +G   NVV +T++I G  + G++ +A 
Sbjct: 600 CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAY 659

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           SL +        PD  ++  +I+ +S   R  EA +  +  LS
Sbjct: 660 SLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQTTVYQLS 702



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 134/296 (45%), Gaps = 23/296 (7%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R + +  D   Y +++  L+K    +    +   M ++G      A++ ++  + ++GK+
Sbjct: 421 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV 480

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A  +L  M++  V P +      +  L   ++L +A    E  +  GI  NV+ Y+ L
Sbjct: 481 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 540

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I G+  + RI +A  +++EM  KG +P+  ++ +++  L K + I               
Sbjct: 541 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN-------------- 586

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                    EA      M +M C P+  TY+ ++NG CRV + ++A    Q M   G  P
Sbjct: 587 ---------EALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVP 637

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           N V+YT  ++GL   G   +A  +    +     P+A +++ ++ G+    +  EA
Sbjct: 638 NVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 693



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 156/334 (46%), Gaps = 1/334 (0%)

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           R   LD A   +  M     +P   +YT  +  L    +   A E++   +E  +     
Sbjct: 22  RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH 81

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            ++ ++  L REG++++A  +V E+      P  V  N+ I    + G +D A KF  E 
Sbjct: 82  LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
             +G   + V++TS+I   C+ G L EA  L   M   +  P    Y T+I      GR 
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 201

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA-YNQVI 589
           E+A +L+ ++  +G +P+VV++ +++    +  +V++ L L E M    +  ++ YN +I
Sbjct: 202 EDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIII 261

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           + LC  G +EEA +IL ++   +   +  T +++V+          AYK+      R   
Sbjct: 262 DMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCN 321

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           PD      + + L  +G+ +EA  L  + ++ GH
Sbjct: 322 PDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH 355



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 36/301 (11%)

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
            L R  +L +A   V  M +  F P      +LI +L    + + A + +++    G  V
Sbjct: 19  ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 78

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
            V  FT+L+R   ++G + +AL+L+D++     +PD V Y   ID   K G V+ A +  
Sbjct: 79  GVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFF 138

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK--CRTAYNQVIENLCSF 595
            ++ ++GL P  V+Y ++I   C+ GR+ +  +L  +M +++   C  AYN +I    S 
Sbjct: 139 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSA 198

Query: 596 GYLEEAGKI----------------------LGK------------VLRTASKADASTCH 621
           G  E+A K+                      LGK            V++  ++ ++ST +
Sbjct: 199 GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYN 258

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
           ++++     G    AY++   M + +L P+L     + +RL    K EEA  +     +R
Sbjct: 259 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 318

Query: 682 G 682
           G
Sbjct: 319 G 319


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 256/538 (47%), Gaps = 21/538 (3%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +F  L+ A++ AG+L++A+YV   M KA     L  CN  ++ LV    +  A+   ++M
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           + AG  P+  T   + K YC   R+  A   + EM   G   + V+Y+ VM   C+  + 
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 298 KEVRDLMEKM---------VNDSNL---FHDQGRIEEAKELVNQMSQM-GCIPDVVTYTA 344
           +  R L+  +         V  + L   +  +GR+EEA+++V ++ +    + D V Y A
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++NG+C+ G ++ A ++  +M   G + N   Y   +NG C  G+  E  +++  +E   
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
              +  +Y+ ++ G  R+G +++A +    MV+ GF  T +  N L+   C  G +D A 
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           K     L +G   N ++ ++L+ GF + G  E+AL+L  +        + VT  T+I+ L
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL 455

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCR 582
            KN R+ EA EL  +M         +TYRT+I  YC++G +    ++  +M  L      
Sbjct: 456 CKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSV 515

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKA---DASTCHVLVESYLNKGIPLLAYKV 639
             +N  I  L      +++GK+    +  ++K    +  T   L+  +  +G    A  +
Sbjct: 516 EMFNSFITGLF---IAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACIL 572

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRV 697
              M  + L P+L +C  +      EGK +EA+ ++ +  +   IQ  S   L   +V
Sbjct: 573 YFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKV 630



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 142/567 (25%), Positives = 250/567 (44%), Gaps = 75/567 (13%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++    +    + A RV   M   G++     ++ ++  Y + G++     +L
Sbjct: 269 DEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLL 328

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
              +   V  +    NT +        + KA    + M   G T   LTYN L+ G+C  
Sbjct: 329 QANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSR 388

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---------VRDLMEKMVND 310
             I DA+KL   M  +G  P+++S  T++    K  + ++          R L   +V  
Sbjct: 389 GAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTI 448

Query: 311 SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           + + +      R+ EA+EL ++M +  C  D +TY  +++G+C++G+L +A ++  +M +
Sbjct: 449 NTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMEN 508

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+   + +F+ GL    +S +  ++      +  +PN +TY  ++ G  +EG L +
Sbjct: 509 LGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHD 568

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK---------KFMQEC----LNKG 474
           AC +  EMV+KG  P     ++L+    REGK+D A            +Q+C    LN G
Sbjct: 569 ACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIG 628

Query: 475 CAVNVV----------------------------------------------NFT--SLI 486
              +++                                              NFT  SLI
Sbjct: 629 KVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLI 688

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G    G ++ A  L D+M   +  P+ VTY ++I  L K+  V  A  L  K+ SKG+ 
Sbjct: 689 HGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGIS 748

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKI 604
           P  +TY T+I  +C+ G   +  KL +KM+ +  Q     Y  +I  LC+ GY+EEA K+
Sbjct: 749 PNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKL 808

Query: 605 LGKVLRTASKADASTCHVLVESYLNKG 631
           L +++      +  T   L++ Y   G
Sbjct: 809 LDQMIENNVDPNFITYWTLIQGYARCG 835



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 185/402 (46%), Gaps = 5/402 (1%)

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           L K +    A+ +   M      C    +  L+  Y + G L  A  +   M+     P+
Sbjct: 455 LCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPS 514

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           + + N+ I  L +  +  K       M   G++PN +TY  LI G+C    + DA  L  
Sbjct: 515 VEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYF 574

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG----RIEEAKEL 326
           EM  KG  P+      ++    +E ++ E   +++K+  D+++  D       I +   +
Sbjct: 575 EMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLA-DTDMIQDCSASTLNIGKVAHI 633

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           +  ++        + +  V+ G C++G +  A+ + + +   G  P+  +Y++ ++G   
Sbjct: 634 IESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSA 693

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
           +G    A  + +       TPN +TY+ +++GL +   +S A  +  ++  KG  P  + 
Sbjct: 694 SGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAIT 753

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            N LI   C++G    A K  Q+ + +G    V  +T LI G C +G +EEA+ LLD M 
Sbjct: 754 YNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMI 813

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
               DP+ +TY T+I   ++ G ++  T+L  +M   GL+P 
Sbjct: 814 ENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPA 855



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 201/483 (41%), Gaps = 73/483 (15%)

Query: 166 LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
           +M R G       ++ L+  +   G + +A+ +  +M K  V PN + C+T +       
Sbjct: 365 MMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAG 424

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           K  +AL   +     G+  NV+T N +I G C   R+ +A +L   M    C  D ++Y 
Sbjct: 425 KTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYR 484

Query: 286 TVMGYLCKEK---RIKEVRDLMEKM-----VNDSNLFHDQGRIEEAKELVN----QMSQM 333
           T++   CK     R  ++R  ME +     V   N F     I +    VN    +MS  
Sbjct: 485 TLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAK 544

Query: 334 GCIPDVVTYTAVVNGFC-----------------------------------RVGELDQA 358
           G  P+ VTY A++ G+C                                   R G++D+A
Sbjct: 545 GLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEA 604

Query: 359 KKMLQQMYH----HGCKPNTVS----------------------YTAFLNGLCHNGKSLE 392
             +LQ++        C  +T++                      +   + GLC  G+  +
Sbjct: 605 NLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVAD 664

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           AR +    + + + P+  TYS ++HG    G +  A  +  EM+     P  V  N LI 
Sbjct: 665 ARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIY 724

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            LC+   +  A     +  +KG + N + + +LI G C+ G+  EA  L   M      P
Sbjct: 725 GLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQP 784

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
              TYT +I  L   G +EEA +L+ +M+   + P  +TY T+I  Y + G ++ + KL 
Sbjct: 785 TVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLY 844

Query: 573 EKM 575
            +M
Sbjct: 845 NEM 847



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 124/542 (22%), Positives = 231/542 (42%), Gaps = 57/542 (10%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN--------- 210
           A   L+ M   G++    A+  +M  Y R G+   A  +L  +Q   ++PN         
Sbjct: 183 AADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVK 242

Query: 211 -----------------------LLICNTAIHVLVVG----NKLAKALRFLERMQLAGIT 243
                                  ++I   A   L+ G     ++  A R  + M  AG+ 
Sbjct: 243 GYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQ 302

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
            N+  YN +I GYC L R+ +  KL+     +G + D+ SY T++   C++  + +  + 
Sbjct: 303 VNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFET 362

Query: 304 MEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
            + MV +             N F  +G I++A +L   M + G +P+ ++ + +++GF +
Sbjct: 363 CDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFK 422

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP-NAI 410
            G+ +QA  + ++    G   N V+    +NGLC N +  EA E+ +   +EW  P +++
Sbjct: 423 AGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFH-RMKEWSCPCDSL 481

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY  ++ G  + G L  A  +  EM   GF P+    N  I  L    +         E 
Sbjct: 482 TYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEM 541

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
             KG + N V + +LI G+C++G+L +A  L  +M      P+    + ++    + G+V
Sbjct: 542 SAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKV 601

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIE 590
           +EA  ++ K+    ++               +G+V  +++ L    + Q  +  +N VI 
Sbjct: 602 DEANLVLQKLADTDMIQDCSA------STLNIGKVAHIIESLAGG-NHQSAKIMWNIVIL 654

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            LC  G + +A  +   +       D  T   L+      G   LA+ +   M +  L P
Sbjct: 655 GLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTP 714

Query: 651 DL 652
           ++
Sbjct: 715 NI 716



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 107/230 (46%), Gaps = 3/230 (1%)

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
           ++ +A ++ +++      G+L +A  V  EM K G   T    N L+  L + G +  A 
Sbjct: 90  FSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAV 149

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
              Q+    G   +      + + +C+ G +  A   L +M     D + V Y  ++D  
Sbjct: 150 AVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGY 209

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--- 581
            + G+ E A +L+  +  KGL P VVTY  ++  YC+ GR+E+  K+++++   +K    
Sbjct: 210 CRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVID 269

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
             AY  +I   C  G +E+A ++  +++    + +    + ++  Y   G
Sbjct: 270 EVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLG 319



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 62/144 (43%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R   + + Y  ++  L K+     A  +   +  +GI      ++ L+  + + G    A
Sbjct: 711 RLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEA 770

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +   M K  + P +      IH L     + +A++ L++M    + PN +TY  LI+G
Sbjct: 771 FKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQG 830

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSP 279
           Y     +K   KL +EM + G  P
Sbjct: 831 YARCGNMKAITKLYNEMHICGLLP 854


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 191/387 (49%), Gaps = 23/387 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+  +SR  ++  A  VL  + K    P+ +  ++ I+ L   +K A+A+ F + M 
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
            +G  PN+ TYN +IKG+C + +   A+ L+ +M   G  PD V Y T++  LCK++ + 
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
           E  D+  ++         +G+              G  PDV TY+ +++G C   + ++A
Sbjct: 242 EALDIFSEI---------KGK--------------GVRPDVFTYSILMHGLCNSDQKEEA 278

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
             +  +M      P+ V++   ++ LC  G   EA+ +I    E+   PN  TY+ +M+G
Sbjct: 279 SALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNG 338

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
              + K+ EA  V   M+ KG  P  V  N+LI   C+  ++D A++   E   +G   N
Sbjct: 339 YCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPN 398

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
             N+ +LI G CQ G   EA  L  DM      PD VT T ++D+L K G ++ A  L  
Sbjct: 399 TFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFR 458

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRV 565
            M    L P +VTY  +I    + G++
Sbjct: 459 AMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 207/443 (46%), Gaps = 27/443 (6%)

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           + +A++  + M      P ++  +  +  LV        L   +R++L  I  +V  +N 
Sbjct: 65  IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI  +  L R+  A  ++ ++   G  PD V++ +++  LC E +               
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKF-------------- 170

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                      A E  ++M   G  P++ TY  ++ GFC++G+   A  +L++M   G +
Sbjct: 171 ---------ARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGR 221

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+ V Y   ++GLC +    EA ++ +  + +   P+  TYS++MHGL    +  EA  +
Sbjct: 222 PDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASAL 281

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             EM+     P  V  N+L+  LC+EG +  A+  ++  + KG   N   + SL+ G+C 
Sbjct: 282 FNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCL 341

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           +  + EA  + D M      P+ V+Y  +I+   K  R++EA EL  +M  +GL+P    
Sbjct: 342 QNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFN 401

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKV 608
           Y T+I   CQ GR  +  +L + M   Q C         ++++LC  GYL+ A ++   +
Sbjct: 402 YNTLISGLCQAGRHCEARELFKDM-QAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAM 460

Query: 609 LRTASKADASTCHVLVESYLNKG 631
             +  K +  T  +L+ +    G
Sbjct: 461 QDSCLKPNLVTYDILIRAMYKSG 483



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 185/396 (46%), Gaps = 23/396 (5%)

Query: 135 WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
            R   D   + +++   S+ +    A  VL  + + G E     FS L+       K   
Sbjct: 113 LRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFAR 172

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           AM     M  +   PNL   NT I       K   A+  L++M  AG  P+++ YN +I 
Sbjct: 173 AMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIID 232

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G C    + +A+ +  E+  KG  PD  +Y  +M  LC                      
Sbjct: 233 GLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNS-------------------- 272

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
            DQ   EEA  L N+M  +  +PDVVT+  +V+  C+ G L +A+ +++ M   G +PN 
Sbjct: 273 -DQK--EEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNY 329

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +Y + +NG C   K  EAR + +    +   PN ++Y+++++G  +  ++ EA ++  E
Sbjct: 330 ATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDE 389

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M  +G  P     N LI  LC+ G+   A++  ++   +GC+ ++V  T L+   C+ G 
Sbjct: 390 MSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGY 449

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           L+ AL L   M      P+ VTY  +I A+ K+G++
Sbjct: 450 LDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 190/398 (47%), Gaps = 19/398 (4%)

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL---MEKMVNDSNL 313
           C L  I+DA+   + M  K   P  V +  ++  L + K    V  L   +E +  + ++
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 314 FHDQ---------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           FH            R++ A  ++ ++ ++G  PD VT+++++NG C   +  +A +   +
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G +PN  +Y   + G C  GK+  A  ++   ++    P+ + Y+ ++ GL ++  
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           +SEA D+  E+  KG  P     ++L+  LC   + + A     E ++     +VV F  
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L+   C++G L EA  ++  M     +P+  TY ++++      +V EA  +   M++KG
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAG 602
            +P VV+Y  +I+ YC+  R+++  +L ++M  +        YN +I  LC  G   EA 
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 603 KILGKVLRTASKADASTCHVLVES-----YLNKGIPLL 635
           ++   +       D  TC +L++S     YL+  + L 
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLF 457



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 135/336 (40%), Gaps = 39/336 (11%)

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC---HNGKSLEAREMINTSEEEWWT 406
           C +  ++ A      M H    P  V +   L+ L    H G  L   + I     E   
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIER-- 117

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
            +   ++++++   R  ++  A  V+ +++K GF P  V  + LI  LC E K   A +F
Sbjct: 118 -DVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEF 176

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
             E +  G   N+  + ++I+GFC+ G    A+ LL  M      PD V Y TIID L K
Sbjct: 177 FDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK 236

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN 586
           +  V EA ++  ++  KG+ P V TY  ++H                             
Sbjct: 237 DRLVSEALDIFSEIKGKGVRPDVFTYSILMH----------------------------- 267

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
                LC+    EEA  +  +++      D  T ++LV+    +G+   A  +   M  +
Sbjct: 268 ----GLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEK 323

Query: 647 NLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            + P+      +     L+ K  EA  +    + +G
Sbjct: 324 GVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 116/256 (45%), Gaps = 5/256 (1%)

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            M+ K   P  VE + L+ +L R           +         +V +F  LI  F +  
Sbjct: 74  HMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQ 133

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            ++ A S+L  +     +PD VT++++I+ L    +   A E   +M++ G  P + TY 
Sbjct: 134 RVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYN 193

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLR 610
           T+I  +C++G+    + LL+KM  K   R     YN +I+ LC    + EA  I  ++  
Sbjct: 194 TIIKGFCKIGKTTVAVGLLKKM-DKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKG 252

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
              + D  T  +L+    N      A  +   M + N++PD+     + ++L  EG   E
Sbjct: 253 KGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSE 312

Query: 671 ADTLMLRFVERGHIQP 686
           A  ++   +E+G ++P
Sbjct: 313 AQGIIKIMIEKG-VEP 327


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 207/446 (46%), Gaps = 68/446 (15%)

Query: 173 ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           +C+P A SY  L+ A  R GK+  A   ++ M +  + P++   N  I  L    ++++A
Sbjct: 30  DCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRA 89

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           + F E M      P+V+TYN L+ G C   R+  A  L   M   G +P  V+Y T++  
Sbjct: 90  IEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDV 145

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            CK                         + E A  L+  M+   C P V +Y +++NG C
Sbjct: 146 FCK-----------------------MCQFETAYGLLQLMASRKCSPTVYSYCSIINGLC 182

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           +  ++DQA ++ ++M   GCKP+ V+Y   ++GLC   +  EA++++    E  + P+ I
Sbjct: 183 KNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKI 242

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC--------------- 455
           T++ ++ GL    ++ EA  + + M K+G  P  V   +L+  LC               
Sbjct: 243 TFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNY 302

Query: 456 ------------------REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
                             R    D A + +Q+   +G   NVV +T+  +G    GD +E
Sbjct: 303 PACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGL---GDWKE 359

Query: 498 ALSLLDD---MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
            +    +   M     +PD V Y  ++D   K  R++ A +++  M   GL P +VTY T
Sbjct: 360 GMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNT 419

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQK 580
           ++  +C+ G+VE + +LL  M+S+ +
Sbjct: 420 LVGHHCRKGKVEAIGELLHTMVSRGR 445



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 208/469 (44%), Gaps = 31/469 (6%)

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           PN L     +  L    K+ KA   +  M    + P+V TYN +I   C   RI  AI+ 
Sbjct: 33  PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 92

Query: 269 IDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVN 328
            + MP     PD V+Y T++G LCK                        GR+ +A  L  
Sbjct: 93  FETMP----EPDVVTYNTLLGGLCK-----------------------NGRVAQACSLFG 125

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            M   G  P  VTYT +++ FC++ + + A  +LQ M    C P   SY + +NGLC N 
Sbjct: 126 SMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNR 185

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           K  +A ++    +     P+ +TY+ ++HGL  + +L EA D++  MV+ GF P  +   
Sbjct: 186 KVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFT 245

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            LI+ LC   ++  A    Q    +GCA ++V  T L+   C    L  ALS++ +   C
Sbjct: 246 ALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPAC 305

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
            +    + YT I   L +    + A  L+ KM  +G+ P VVTY                
Sbjct: 306 PE--AVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRA 363

Query: 569 LKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
            +   +ML +  +    AYN +++  C    L+ A K++  + ++    +  T + LV  
Sbjct: 364 YREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGH 423

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           +  KG      ++   M +R   PD+     +   L + G+++ A + +
Sbjct: 424 HCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFL 472



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 191/419 (45%), Gaps = 22/419 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y ++++ L K      A+R+ R +        P+  +Y  L+    + G++  A  
Sbjct: 69  DVFTYNVVIDTLCK------ARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQACS 122

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M+ A + P+ +   T I V     +   A   L+ M     +P V +Y  +I G C
Sbjct: 123 LFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLC 182

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSN 312
              ++  A +L +EM L GC PD+V+Y T++  LC ++R+ E +DL+  MV      D  
Sbjct: 183 KNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKI 242

Query: 313 LFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            F           RI+EA  L   M++ GC PD+VT+T +V+  C + +L  A  +++  
Sbjct: 243 TFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRN- 301

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
            +  C    + YT     L        A  ++         PN +TY+    GL    + 
Sbjct: 302 -YPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEG 360

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             A    R M+++G  P  V  N+L+   C+  ++D A+K ++     G   N+V + +L
Sbjct: 361 MRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTL 420

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +   C+KG +E    LL  M    + PD  T++T++  L   G+ + A   +   +S+G
Sbjct: 421 VGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 6/288 (2%)

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           VT  A+++   R    +Q   + ++++   CKPN +SY   +  LC  GK  +A   I  
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
              E   P+  TY+VV+  L +  ++S A +    M +    P  V  N L+  LC+ G+
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGR 116

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
           +  A          G   + V +T+LI  FC+    E A  LL  M   K  P   +Y +
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK- 578
           II+ L KN +V++A +L  +M   G  P  VTY T+IH  C   R+ +   LL  M+   
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 579 -QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
            Q  +  +  +IE LC+   ++EA  +   + +     D  T  VLV 
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVS 284



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 33/215 (15%)

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N L+  L R  + +      +   ++ C  N +++  L++  C+ G +++A S + +
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 505 MYLCKKDPDTVTYTTIID-------------------------------ALSKNGRVEEA 533
           M   K  PD  TY  +ID                                L KNGRV +A
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQA 120

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN--QVIEN 591
             L   M   G+ P+ VTY T+I  +C++ + E    LL+ M S++   T Y+   +I  
Sbjct: 121 CSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIING 180

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           LC    +++A ++  ++     K D  T + L+  
Sbjct: 181 LCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHG 215


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 191/384 (49%), Gaps = 24/384 (6%)

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID-EMPLKGCSPDKVSYYTVMGYLCKEK 295
           M + G+  N  T + +++G C   R+  A++  D  + L    PD VSY T++  LCK  
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           R+    DL  KMV                      +  GC P+  TY A+V+G C+   L
Sbjct: 61  RVDAAFDLFRKMV----------------------AAGGCRPNAFTYNALVDGLCKQDRL 98

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           D A+ ++ +       P+ V+Y   +  L   G+  EA        EE + P  ++++ +
Sbjct: 99  DAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAI 158

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + GL R  +L++A +V  EM+ + F P  V  +++I  LC+  ++D A++ +   +++GC
Sbjct: 159 ITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGC 218

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             ++V +T L+ GF   G L+ AL LL  M      PD VTYT +ID L K GRV++A E
Sbjct: 219 RPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHE 278

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSF 595
           +  ++++    P VVTY  +I  YC+  RV++  K++ +M  +    T YN +I  L   
Sbjct: 279 IFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACRPNVVT-YNTMIWGLSMV 337

Query: 596 GYLEEAGKILGKVLRTASKADAST 619
              EEA  +  ++       DA T
Sbjct: 338 DRNEEAYGMFREMSECGFVPDART 361



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 180/343 (52%), Gaps = 17/343 (4%)

Query: 225 NKLAKAL-RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM-PLKGCSPDKV 282
            ++A+AL  F   ++LA   P+V++Y  LI G C L R+  A  L  +M    GC P+  
Sbjct: 24  GRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAF 83

Query: 283 SYYTVMGYLCKEKRIKEVR---------DLMEKMVNDSNL---FHDQGRIEEAKELVNQM 330
           +Y  ++  LCK+ R+   R         D    +V  + L       GR++EA     QM
Sbjct: 84  TYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQM 143

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
           ++ G +P +V++ A++ G CR   L  A ++  +M      PN V+Y+  ++GLC + + 
Sbjct: 144 TEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQL 203

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA+++++    E   P+ + Y+ ++ G    G+L  A  ++R MV +G  P  V   ++
Sbjct: 204 DEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVV 263

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
           I  LC+ G++D A +  +E +   C+ NVV +++LI G+C+   ++E   ++ +M  C+ 
Sbjct: 264 IDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM-ACR- 321

Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            P+ VTY T+I  LS   R EEA  +  +M   G VP   TYR
Sbjct: 322 -PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYR 363



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 172/333 (51%), Gaps = 18/333 (5%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY-- 181
           AL+ F  +      + D + Y  ++  L K      A  + R M   G  CRP AF+Y  
Sbjct: 29  ALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAG-GCRPNAFTYNA 87

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+    +  +L  A  V++  +K   AP+++  NT +  L    ++ +AL    +M   G
Sbjct: 88  LVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG 147

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             P ++++N +I G C   R+ DA+++ +EM  +   P+ V+Y  V+  LCK  ++ E +
Sbjct: 148 YVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQ 207

Query: 302 DLMEKMVNDS---NL---------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            L+++MV++    +L         F   GR++ A  L+ +M   GCIPDVVTYT V++  
Sbjct: 208 QLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKL 267

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+VG +D A ++ +++  + C PN V+Y+A + G C   +  E  +++    E    PN 
Sbjct: 268 CKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVM---REMACRPNV 324

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           +TY+ ++ GL    +  EA  + REM + GF P
Sbjct: 325 VTYNTMIWGLSMVDRNEEAYGMFREMSECGFVP 357



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 26/288 (9%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R+  +  D + Y  ++  L +      A      M   G      +F+ ++    RA +L
Sbjct: 109 RKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRL 168

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            +A+ V + M      PNL+  +  I  L   ++L +A + L+RM   G  P+++ Y  L
Sbjct: 169 ADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPL 228

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           + G+    R+  A+ L+  M  +GC PD V+Y  V+  LCK                   
Sbjct: 229 VLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCK------------------- 269

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                GR+++A E+  ++    C P+VVTY+A++ G+CR   +D+  K++++M    C+P
Sbjct: 270 ----VGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRP 322

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           N V+Y   + GL    ++ EA  M     E  + P+A TY  +   LR
Sbjct: 323 NVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALR 370



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 8/278 (2%)

Query: 408 NAITYSVVMHGLRREGKLSEAC---DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA- 463
           N  T S+++ GL R G++++A    D   E+      P  V    LI  LC+ G++D A 
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQ--PDVVSYTTLINGLCKLGRVDAAF 66

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
             F +     GC  N   + +L+ G C++  L+ A +++ +       PD VTY T++ A
Sbjct: 67  DLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAA 126

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKC 581
           L + GRV+EA     +M  +G VPT+V++  +I   C+  R+ D L++  +M+ +     
Sbjct: 127 LFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPN 186

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              Y+ VI+ LC    L+EA ++L +++    + D      LV  +   G    A  +  
Sbjct: 187 LVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLR 246

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
           RM ++  IPD+     V ++L   G+ ++A  +    V
Sbjct: 247 RMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELV 284



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 43/241 (17%)

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCA-VNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           ++++Q LCR G++  A +     L    A  +VV++T+LI G C+ G ++ A  L   M 
Sbjct: 14  SIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMV 73

Query: 507 L---CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
               C+  P+  TY  ++D L K  R++ A  ++ +   +   P VVTY T++    Q+G
Sbjct: 74  AAGGCR--PNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLG 131

Query: 564 RVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           RV++ L    +M  +    T  ++N +I  LC    L +A ++  +              
Sbjct: 132 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNE-------------- 177

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
                                M +R+  P+L     V + L    + +EA  L+ R V  
Sbjct: 178 ---------------------MIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE 216

Query: 682 G 682
           G
Sbjct: 217 G 217


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/532 (23%), Positives = 239/532 (44%), Gaps = 86/532 (16%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
            + +++  L  +     A+ +   M  +G  C+P  F++  L+  Y +AG     + +L+
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKG--CKPNEFTFGILVRGYCKAGLTDKGLELLN 206

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M+   V PN ++ NT +       +   + + +E+M+  G+ P+++T+N  I   C   
Sbjct: 207 SMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEG 266

Query: 261 RIKDAIKLIDEMPLK---GCS-PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           ++ DA ++  +M L    G   P+ ++Y  ++   CK   +++ + L E +  + +L   
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSL 326

Query: 317 Q------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
           Q            G+  EA+ ++ QM   G  P + +Y  +++G C++G L  AK ++  
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M  +G  P+ V+Y   L+G C  GK   A+ ++         PNA T ++++H L   G+
Sbjct: 387 MKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGR 446

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ---------------- 468
           +SEA +++R+M +KG+    V  N+++  LC  G++D A + ++                
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506

Query: 469 -------ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
                    +   C  +++ +++L+ G C+ G   EA +L  +M   K  PD++ Y   I
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFI 566

Query: 522 DALSKNGRVEEATE-----------------------------------LMMKMLSKGLV 546
               K G++  A                                     LM +M  KG+ 
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGIS 626

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYL 598
           P + TY T I   C+ G+VED   LL++M+ K         +  N+ SF YL
Sbjct: 627 PNICTYNTAIQYLCEGGKVEDATNLLDEMMQK--------NIAPNVFSFKYL 670



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 232/520 (44%), Gaps = 40/520 (7%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + I Y +ML+   K  L + AK +   +         ++++  +    R GK   A  
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAET 347

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL  M    + P++   N  +  L     L+ A   +  M+  G++P+ +TY CL+ GYC
Sbjct: 348 VLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYC 407

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
            + ++  A  L+ EM    C P+  +   ++  L    RI E  +L+ KM          
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTV 467

Query: 312 --NLFHD----QGRIEEAKELVNQMSQMG-----------------------CIPDVVTY 342
             N+  D     G +++A E+V  M   G                       C+PD++TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           + ++NG C+ G   +AK +  +M     +P++++Y  F++  C  GK   A  ++   E+
Sbjct: 528 STLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEK 587

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
           +    +  TY+ ++ GL  + ++ E   ++ EM +KG  P     N  IQ LC  GK++ 
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVED 647

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD-MYLCKKDPDTVTYTTII 521
           A   + E + K  A NV +F  LI  FC+  D + A  + +  + +C +      Y+ + 
Sbjct: 648 ATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEG--LYSLMF 705

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           + L   G++ +ATEL+  +L +G       Y+ ++   C+   +E    +L KM+ K   
Sbjct: 706 NELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYG 765

Query: 582 --RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
               A   VI+ L   G  +EA     K++  AS  + + 
Sbjct: 766 FDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASVGEVAN 805



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 145/590 (24%), Positives = 258/590 (43%), Gaps = 58/590 (9%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQK 204
           ++ I +K+     A    + +  R  E +P  + Y  L+ +  R  ++    ++   M  
Sbjct: 81  VVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVL 140

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
             ++P     N  I  L   + +  A    + M   G  PN  T+  L++GYC       
Sbjct: 141 CGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDK 200

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD--- 316
            ++L++ M   G  P+KV Y T++   C+E R  +   L+EKM     V D   F+    
Sbjct: 201 GLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRIS 260

Query: 317 ----QGRIEEAKELVNQM---SQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
               +G++ +A  + + M     +G   P+ +TY  ++ GFC+VG L+ AK + + +  +
Sbjct: 261 ALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
               +  SY  +L GL  +GK +EA  ++    ++   P+  +Y+++M GL + G LS+A
Sbjct: 321 DDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDA 380

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             +V  M + G  P  V    L+   C  GK+D AK  +QE +   C  N      L+  
Sbjct: 381 KTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG---- 544
               G + EA  LL  M       DTVT   I+D L  +G +++A E++  M   G    
Sbjct: 441 LWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL 500

Query: 545 -------------------LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
                               +P ++TY T+++  C+ GR  +   L  +M+ +  Q    
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSL 560

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY----LNKGIPLLAYKV 639
           AYN  I + C  G +  A ++L  + +         CH  +E+Y    L  GI    +++
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKG-------CHKSLETYNSLILGLGIKNQIFEI 613

Query: 640 AC---RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
                 M  + + P++       + L   GK E+A  L+   +++ +I P
Sbjct: 614 HGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQK-NIAP 662


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 134/526 (25%), Positives = 248/526 (47%), Gaps = 22/526 (4%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
            Y ++++I  K +  + A  +L  M  + +  +P+ FSY  L+    + G L  A+ V  
Sbjct: 153 TYNILIKISCKKQQIEKAISLLDWMWSQNL--KPDVFSYGTLINGMVKVGDLLGALKVFD 210

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM-QLAGITPNVLTYNCLIKGYCDL 259
            M    V  ++   N  I          K     ER+ +   + PNV+TYN +I G C  
Sbjct: 211 EMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKC 270

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R  +++++ + M       D  +Y +++  LC+   I     + +++V  S        
Sbjct: 271 GRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTH 330

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               N F   G+I+E+ EL   M +  C   VV+Y  ++ G    G++++A  + + +  
Sbjct: 331 NAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSYNILIKGLFENGKVEEAISIWELLCK 389

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC+P + +Y   ++GLC NG+  +A ++   +E+     +A  YS ++ GL +EG++ E
Sbjct: 390 KGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDE 449

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +V +M K+G+   P   N LI    R  K++ A  F +E   KGC+  +V++ +LI+
Sbjct: 450 AISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIK 509

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           G C+     EA S + +M   +  PD +T + ++D L +  ++E A  L  + L KG  P
Sbjct: 510 GLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKP 569

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKI 604
            +  Y  ++H  C V ++ED L+L   M  +  C       N ++E L      E+A +I
Sbjct: 570 DITMYNILMHGLCSVCKLEDALQLYSHM-KRSTCVPNLVTRNTLMEGLYKVRDYEKASEI 628

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
              +L+     D  + ++ ++   +      A +      NR ++P
Sbjct: 629 WDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILP 674



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/549 (23%), Positives = 256/549 (46%), Gaps = 22/549 (4%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           AL  F  A R  +     + ++++  + + ++L     R++ ++  +   C+ +    ++
Sbjct: 29  ALSLFESASRN-KSHSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCKEDVALTVI 87

Query: 184 VAYSRAGKLRNAMYVLSMMQKA-AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
            AY++      A+     MQ      P +   NT ++  V  N+  +A  F    +   +
Sbjct: 88  KAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDV 147

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
           +PN+ TYN LIK  C   +I+ AI L+D M  +   PD  SY T++  + K   +     
Sbjct: 148 SPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALK 207

Query: 303 LMEKM--------VNDSNL----FHDQGRIEEAKELVNQMSQ-MGCIPDVVTYTAVVNGF 349
           + ++M        V   N+    F   G  ++ KE+  ++ +     P+VVTY  ++NG 
Sbjct: 208 VFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGL 267

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G  D++ ++ ++M  +  + +  +Y++ ++GLC  G    A  +     E     +A
Sbjct: 268 CKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDA 327

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           +T++ +++G  R GK+ E+ ++   M K+    T V  N+LI+ L   GK++ A    + 
Sbjct: 328 VTHNAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSYNILIKGLFENGKVEEAISIWEL 386

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              KGC      +  LI G C+ G L +AL +  +        D   Y++++D L K GR
Sbjct: 387 LCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGR 446

Query: 530 VEEATELMMKMLSKG--LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AY 585
           ++EA  ++ +M  +G  L P V     +I+ + +  ++ED +    +M  K    T  +Y
Sbjct: 447 MDEAISIVNQMDKRGYKLDPHVCN--PLINGFVRASKLEDAINFFREMECKGCSPTIVSY 504

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           N +I+ LC      EA   + ++L    K D  TC +L++    +    +A  +  +  +
Sbjct: 505 NTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALD 564

Query: 646 RNLIPDLKL 654
           +   PD+ +
Sbjct: 565 KGFKPDITM 573



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 186/417 (44%), Gaps = 24/417 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++  L +     GA RV + +    +       + ++  + RAGK++ +  + 
Sbjct: 291 DMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELW 350

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            +M K      ++  N  I  L    K+ +A+   E +   G  P   TY  LI G C  
Sbjct: 351 MVMGKEN-CQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKN 409

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R+  A+K+  E        D  +Y +++  LCKE                       GR
Sbjct: 410 GRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKE-----------------------GR 446

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++EA  +VNQM + G   D      ++NGF R  +L+ A    ++M   GC P  VSY  
Sbjct: 447 MDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNT 506

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            + GLC   +  EA   +    E+ W P+ IT S++M GL +E K+  A ++ ++ + KG
Sbjct: 507 LIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKG 566

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           F P     N+L+  LC   K++ A +         C  N+V   +L+ G  +  D E+A 
Sbjct: 567 FKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKAS 626

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            + D +      PD ++Y   I  L    R+ +A E +   L++G++PT VT+  ++
Sbjct: 627 EIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILV 683



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 161/349 (46%), Gaps = 27/349 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           + Y ++++ L +    + A  +  L+ ++G  CRPE+ +Y  L+    + G+L  A+ + 
Sbjct: 362 VSYNILIKGLFENGKVEEAISIWELLCKKG--CRPESTTYGVLIHGLCKNGRLNKALKIF 419

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
              +      +    ++ +  L    ++ +A+  + +M   G   +    N LI G+   
Sbjct: 420 KEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRA 479

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            +++DAI    EM  KGCSP  VSY T++  LCK +R                       
Sbjct: 480 SKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERF---------------------- 517

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
             EA   V +M +    PD++T + +++G C+  +++ A  + QQ    G KP+   Y  
Sbjct: 518 -SEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNI 576

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++GLC   K  +A ++ +  +     PN +T + +M GL +     +A ++   ++K G
Sbjct: 577 LMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDG 636

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             P  +  N+ I+ LC   ++  A +F+ + LN+G     V +  L+R 
Sbjct: 637 LHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRA 685



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 172/360 (47%), Gaps = 6/360 (1%)

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           N     GC P V +Y  ++N F  + E D+A+   +        PN  +Y   +   C  
Sbjct: 105 NMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKK 164

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
            +  +A  +++    +   P+  +Y  +++G+ + G L  A  V  EM  +G        
Sbjct: 165 QQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCY 224

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAV--NVVNFTSLIRGFCQKGDLEEALSLLDDM 505
           N+LI    + G  D  K+  +  L K C+V  NVV +  +I G C+ G  +E+L + + M
Sbjct: 225 NMLIDGFFKHGDYDKGKEIWER-LVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERM 283

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
              +++ D  TY+++I  L + G ++ A  +  +++   LV   VT+  +++ +C+ G++
Sbjct: 284 TKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKI 343

Query: 566 EDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           ++  +L   ++ K+ C+T  +YN +I+ L   G +EEA  I   + +   + +++T  VL
Sbjct: 344 KESFELW-MVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVL 402

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
           +      G    A K+     +     D      + + L  EG+ +EA +++ +  +RG+
Sbjct: 403 IHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGY 462



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 166/364 (45%), Gaps = 6/364 (1%)

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           N F +    + A+        M   P++ TY  ++   C+  ++++A  +L  M+    K
Sbjct: 124 NAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLK 183

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+  SY   +NG+   G  L A ++ +         +   Y++++ G  + G   +  ++
Sbjct: 184 PDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEI 243

Query: 432 VREMVKK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
              +VK    +P  V  N++I  LC+ G+ D + +  +         ++  ++SLI G C
Sbjct: 244 WERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLC 303

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           + G+++ A+ +  ++       D VT+  +++   + G+++E+ EL M M  K    TVV
Sbjct: 304 EAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVM-GKENCQTVV 362

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGK 607
           +Y  +I    + G+VE+ + + E +L K+ CR   T Y  +I  LC  G L +A KI  +
Sbjct: 363 SYNILIKGLFENGKVEEAISIWE-LLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKE 421

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
                 K DA     +V+    +G    A  +  +M  R    D  +C  +    +   K
Sbjct: 422 AEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASK 481

Query: 668 SEEA 671
            E+A
Sbjct: 482 LEDA 485



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 27/247 (10%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y+ DP V   ++    +    + A    R M  +G  C P   SY  L+    +A +   
Sbjct: 462 YKLDPHVCNPLINGFVRASKLEDAINFFREMECKG--CSPTIVSYNTLIKGLCKAERFSE 519

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A   +  M +    P+++ C+  +  L    K+  AL   ++    G  P++  YN L+ 
Sbjct: 520 AYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMH 579

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
           G C + +++DA++L   M    C P+ V+  T+M  L K      VRD            
Sbjct: 580 GLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYK------VRDY----------- 622

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
                 E+A E+ + + + G  PD+++Y   + G C    +  A + L    + G  P  
Sbjct: 623 ------EKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTA 676

Query: 375 VSYTAFL 381
           V++   +
Sbjct: 677 VTWNILV 683



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 76/153 (49%), Gaps = 2/153 (1%)

Query: 132 DRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGK 191
           +++W+   D I   ++++ L + K  + A  + +    +G +     ++ LM       K
Sbjct: 529 EKEWK--PDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCK 586

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           L +A+ + S M+++   PNL+  NT +  L       KA    + +   G+ P++++YN 
Sbjct: 587 LEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNI 646

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            IKG C   RI DAI+ +++   +G  P  V++
Sbjct: 647 TIKGLCSCSRISDAIEFLNDALNRGILPTAVTW 679


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 232/507 (45%), Gaps = 47/507 (9%)

Query: 130 WAD-----RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--L 182
           WAD      +  ++ D ++   M+  L +      A   L  M  R   C P   +Y  L
Sbjct: 260 WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM--RCNSCIPNVVTYRTL 317

Query: 183 MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
           +  + +  +L     +++MM      PN  + N+ +H        A A + L RM   G 
Sbjct: 318 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 377

Query: 243 TPNVLTYNCLIKGYCDLHRIKD------AIKLIDEMPLKGCSPDKVSYYTVMGYLCK--- 293
            P  + YN  I   C   ++        A K+  EM    C  +KV+       LC    
Sbjct: 378 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 437

Query: 294 -EKRIKEVRDLMEK-MVNDSNLFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            +K  + ++++M K  V D++ +           ++E+A  L  +M  +G  PDV TYT 
Sbjct: 438 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 497

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++ FC+ G ++QA+ + ++M   GC P  V+YTA ++      +  +A ++ +   +  
Sbjct: 498 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 557

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMV----------------KKGFFPTPVEIN 448
             PN +TY  ++ GL + G +S+A +V  +++                +    P  V   
Sbjct: 558 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 617

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            L+  LC+  K+D A + +   L+ GC  N + + +LI GFC+ G ++ A  +   M  C
Sbjct: 618 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 677

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              P   TYT++ID + K+GR++ A +++ +ML     P VVTY  +I   C++G  E  
Sbjct: 678 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 737

Query: 569 LKLLEKMLSKQKCR---TAYNQVIENL 592
           LKLL  ++ ++ C      Y  +I+ L
Sbjct: 738 LKLLS-LMEEKGCSPNVVTYTALIDGL 763



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 215/463 (46%), Gaps = 38/463 (8%)

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
           ++++     A     AM  L  M+  +  PN++   T +   +   +L    R +  M  
Sbjct: 280 THMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMT 339

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK- 298
            G  PN   +N L+  YC+      A KL++ M   GC P  V Y   +G +C ++++  
Sbjct: 340 EGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPS 399

Query: 299 -EVRDLMEKM-------------VNDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVT 341
            ++ DL EK+             VN +N        G+ ++A +L+ +M + G +PD  T
Sbjct: 400 PDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTST 459

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y+ V+   C   ++++A  + Q+M   G  P+  +YT  ++  C  G   +A+ +     
Sbjct: 460 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 519

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
               +P  +TY+ ++H   +  ++ +A D+   MV  G  P  V    L+  LC+ G + 
Sbjct: 520 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNIS 579

Query: 462 GA---------------KKFMQECLNKGC-AVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
            A                 F   C ++   A NVV + +L+ G C+   ++ A  LLD M
Sbjct: 580 KAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM 639

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                +P+ + Y  +ID   K G+++ A E+ ++M   G +P+V TY ++I R  + GR+
Sbjct: 640 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 699

Query: 566 EDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKIL 605
           +  +K+L +ML K  C      Y  +I+ LC  G  E+A K+L
Sbjct: 700 DLAMKVLSQML-KDSCTPNVVTYTAMIDGLCRIGESEKALKLL 741



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 167/354 (47%), Gaps = 39/354 (11%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GK   A  ++  M +    P+    +  I  L    K+ KA    + M++ G+TP+V TY
Sbjct: 436 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 495

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             LI  +C    I+ A  L +EM   GCSP  V+Y  ++    K K++ +  D+  +MV+
Sbjct: 496 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 555

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY--- 366
                                   GC P+ VTY A+V+G C+ G + +A ++  ++    
Sbjct: 556 -----------------------AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 592

Query: 367 -------------HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
                         H   PN V+Y A ++GLC   K   A E+++        PN I Y 
Sbjct: 593 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 652

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            ++ G  + GK+  A +V  +M K G+ P+      LI  + ++G++D A K + + L  
Sbjct: 653 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 712

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
            C  NVV +T++I G C+ G+ E+AL LL  M      P+ VTYT +ID L ++
Sbjct: 713 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 153/666 (22%), Positives = 274/666 (41%), Gaps = 73/666 (10%)

Query: 90  AWSPKLEGELRNLLRS----LKPRQICAVLRSQADE-RVALQFFYWADRQWRYRHDPIVY 144
           A+    +G+   +LR     L    + AVL +  D   +  +FF WA+RQ  Y H    Y
Sbjct: 83  AFGADFDGKAERVLRRCRGFLTDSVVVAVLGAVRDAPELCARFFLWAERQVGYSHTGACY 142

Query: 145 YMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQK 204
             + + L      + A+R+LR +     E      + L+    R G    A+  L  ++ 
Sbjct: 143 DALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKD 202

Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
               P+ +  N  + VL    ++    R  + M  +G   +  T  C     C   R  D
Sbjct: 203 FGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWAD 262

Query: 265 AIKLID--------------------------------EMPLKGCSPDKVSYYTVMGYLC 292
           A+ +I+                                 M    C P+ V+Y T++    
Sbjct: 263 ALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFL 322

Query: 293 KEKRIKEVRDLMEKMVND---------SNLFH---DQGRIEEAKELVNQMSQMGCIPDVV 340
           K+K++   + ++  M+ +         ++L H   ++     A +L+N+M+  GC P  V
Sbjct: 323 KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV 382

Query: 341 TYTAVVNGFCRVGE------LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            Y   +   C   +      LD A+K+  +M    C  N V+   F   LC  GK  +A 
Sbjct: 383 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 442

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           ++I     + + P+  TYS V+  L    K+ +A  + +EM   G  P      +LI S 
Sbjct: 443 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 502

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G ++ A+   +E  + GC+  VV +T+LI  + +   + +A  +   M      P+ 
Sbjct: 503 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 562

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKG----------------LVPTVVTYRTVIHR 558
           VTY  ++D L K G + +A E+  K++                   L P VVTY  ++  
Sbjct: 563 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 622

Query: 559 YCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            C+  +V+   +LL+ MLS   +     Y+ +I+  C  G ++ A ++  ++ +      
Sbjct: 623 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 682

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
             T   L++     G   LA KV  +M   +  P++     + + L   G+SE+A  L+ 
Sbjct: 683 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 742

Query: 677 RFVERG 682
              E+G
Sbjct: 743 LMEEKG 748



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 77/162 (47%)

Query: 127 FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY 186
           F++  + +     + + Y  +++ L K      A  +L  M   G E     +  L+  +
Sbjct: 599 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 658

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV 246
            +AGK+ +A  V   M K    P++    + I  +    +L  A++ L +M     TPNV
Sbjct: 659 CKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNV 718

Query: 247 LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           +TY  +I G C +   + A+KL+  M  KGCSP+ V+Y  ++
Sbjct: 719 VTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 760


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 234/494 (47%), Gaps = 27/494 (5%)

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           ++ + + RRG +     FS +++ + R G +     +L +M K    PN    N  I+  
Sbjct: 42  KLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINAC 101

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
            +  + + AL +   M   G  P V+T+N +I  +C    + +A KL D +   G SP+ 
Sbjct: 102 CIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNA 161

Query: 282 VSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
           + Y T+M GY+    +++E                    I++A  L  +M + G  PD +
Sbjct: 162 IMYNTLMNGYV----KMRE--------------------IDQANMLYEEMRKKGIAPDGI 197

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           T+  +V+G  + G  +   ++L+ +   G  P+   +   ++GLC  G+  EA E +   
Sbjct: 198 TFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDM 257

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
            E+  +P+ I ++ V+    + G   +A +  + MV  G  P+P   + L+  L   G++
Sbjct: 258 LEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRL 317

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             A + + + + KG +VN + FT L+  F ++GD+  A SL  +M      PD V ++  
Sbjct: 318 QEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAF 377

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           ID LSK G VEEA  + ++ML KGL+P    Y ++I  +C+ G++ + LKL + M  +  
Sbjct: 378 IDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGL 437

Query: 581 CRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
               +  N +I  LC  G +  A  +   + +T    D  T + L+  Y      + A  
Sbjct: 438 LPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADN 497

Query: 639 VACRMFNRNLIPDL 652
           +  RM+     PDL
Sbjct: 498 LVNRMYASGSNPDL 511



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 217/467 (46%), Gaps = 51/467 (10%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
            + +L LM +    C P AF+Y +V  A    G+  +A+   ++M +    P ++  NT 
Sbjct: 75  GESLLHLMPK--FHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTV 132

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I+       + +A +  + ++  G +PN + YN L+ GY  +  I  A  L +EM  KG 
Sbjct: 133 INAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGI 192

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEK-----MVNDSNLFHDQ-------GRIEEAKE 325
           +PD +++  ++    K  R ++   L++      ++ D +LF          GR++EA E
Sbjct: 193 APDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAME 252

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
            +  M + G  P ++ + +V+  + + G  D+A +  + M H G  P+  + ++ L GL 
Sbjct: 253 FLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLS 312

Query: 386 HNGKSLEAREMIN---------------------------TSEEEWWT--------PNAI 410
            NG+  EA E+I                               +  W         P+ +
Sbjct: 313 INGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVV 372

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            +S  + GL ++G + EA +V  EM++KG  P     N LI   C+ GK++ A K  +  
Sbjct: 373 AFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVM 432

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
            ++G   ++     +I G C++G +  A+++  DM+     PD +TY T+I+   K   +
Sbjct: 433 RHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDM 492

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
             A  L+ +M + G  P + TY   IH +C   R+   + +L++++S
Sbjct: 493 VNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVS 539



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 202/432 (46%), Gaps = 51/432 (11%)

Query: 164 LRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
             LM  RG  C P    F+ ++ A+ + G +  A  +   +++   +PN ++ NT ++  
Sbjct: 114 FNLMIERG--CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGY 171

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
           V   ++ +A    E M+  GI P+ +T+N L+ G+    R +D  +L+ ++ + G  PD+
Sbjct: 172 VKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDR 231

Query: 282 VSYYTVMGYLCKEKRIKE----VRDLMEKMVNDSNLFHD--------------------- 316
             +   +  LC   R+ E    + D++EK ++ S +  +                     
Sbjct: 232 SLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKL 291

Query: 317 ----------------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
                                  GR++EA EL+ QM + G   + + +T +++ F + G+
Sbjct: 292 MVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGD 351

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           +  A+ +  +M   G  P+ V+++AF++GL   G   EA  +      +   PN   Y+ 
Sbjct: 352 VVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNS 411

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           ++ G  + GKL+EA  + + M  +G  P     N++I  LC++G+M  A     +    G
Sbjct: 412 LICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTG 471

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
            + +++ + +LI G+C+  D+  A +L++ MY    +PD  TY   I     + R+  A 
Sbjct: 472 LSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAV 531

Query: 535 ELMMKMLSKGLV 546
            ++ +++S G++
Sbjct: 532 LMLDELVSAGIL 543



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 113/491 (23%), Positives = 207/491 (42%), Gaps = 60/491 (12%)

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           +AL  L RM+  G+ P+      L K    +    +  KL  ++  +G  P K ++  ++
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 289 GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
              C+                       +G I   + L++ M +  C P+   Y  V+N 
Sbjct: 64  LGFCR-----------------------KGCIHLGESLLHLMPKFHCEPNAFAYNIVINA 100

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
            C  G    A      M   GC P  V++   +N  C  G  +EAR++ +  +E  ++PN
Sbjct: 101 CCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPN 160

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL------------------ 450
           AI Y+ +M+G  +  ++ +A  +  EM KKG  P  +  N+L                  
Sbjct: 161 AIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLK 220

Query: 451 -----------------IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
                            +  LC  G++D A +F+ + L KG + +++ F S+I  + Q G
Sbjct: 221 DISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAG 280

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
             ++A      M      P   T ++++  LS NGR++EATEL+ +M+ KGL    + + 
Sbjct: 281 LEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFT 340

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            ++ ++ + G V     L  +M  +       A++  I+ L   G +EEA  +  ++LR 
Sbjct: 341 VLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRK 400

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
               +    + L+  +   G    A K+   M +R L+PD+     +   L  +G+   A
Sbjct: 401 GLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSA 460

Query: 672 DTLMLRFVERG 682
             + +   + G
Sbjct: 461 INVFMDMHQTG 471



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 165/357 (46%), Gaps = 10/357 (2%)

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  P   T++ ++ GFCR G +   + +L  M    C+PN  +Y   +N  C  G++ +A
Sbjct: 51  GPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDA 110

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
               N   E    P  +T++ V++   +EG + EA  +   + + GF P  +  N L+  
Sbjct: 111 LAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNG 170

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
             +  ++D A    +E   KG A + + F  L+ G  + G  E+   LL D+ +    PD
Sbjct: 171 YVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPD 230

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
              +   +  L   GR++EA E +M ML KGL P+++ + +VI  Y Q G  +   +  +
Sbjct: 231 RSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK 290

Query: 574 KML------SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            M+      S   C +    ++  L   G L+EA +++G+++      +     VL++ +
Sbjct: 291 LMVHFGLTPSPSTCSS----LLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKF 346

Query: 628 LNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
             +G  + A  +   M  R + PD+       + L  +G  EEA  + L  + +G I
Sbjct: 347 FKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLI 403



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 144/329 (43%), Gaps = 28/329 (8%)

Query: 151 LSKTKLCQG-----AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           +S + LC       A   L  M  +G+     AF+ ++ AYS+AG    A     +M   
Sbjct: 236 ISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHF 295

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            + P+   C++ +  L +  +L +A   + +M   G++ N + +  L+  +     +  A
Sbjct: 296 GLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGA 355

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
             L  EM  +G  PD V++   +  L K                       QG +EEA  
Sbjct: 356 QSLWGEMERRGIFPDVVAFSAFIDGLSK-----------------------QGLVEEAYN 392

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           +  +M + G IP+   Y +++ GFC+ G+L++A K+ + M H G  P+  +    + GLC
Sbjct: 393 VFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLC 452

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G+   A  +     +   +P+ ITY+ +++G  +   +  A ++V  M   G  P   
Sbjct: 453 KQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLT 512

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKG 474
             N+ I   C   +M+ A   + E ++ G
Sbjct: 513 TYNIRIHGFCSSRRMNRAVLMLDELVSAG 541



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 30/244 (12%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + + ++L+   K     GA+ +   M RRGI     AFS  +   S+ G +  A  V   
Sbjct: 337 MAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLE 396

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M +  + PN    N+ I       KL +AL+  + M+  G+ P++ T N +I G C   R
Sbjct: 397 MLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGR 456

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           ++ AI +  +M   G SPD ++Y T++   CK             MVN  N         
Sbjct: 457 MRSAINVFMDMHQTGLSPDIITYNTLINGYCKAF----------DMVNADN--------- 497

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG-------CKPNT 374
               LVN+M   G  PD+ TY   ++GFC    +++A  ML ++   G       C P  
Sbjct: 498 ----LVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGILSFSFACPPTL 553

Query: 375 VSYT 378
            ++T
Sbjct: 554 NAHT 557



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 1/181 (0%)

Query: 130 WADRQWR-YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR 188
           W + + R    D + +   ++ LSK  L + A  V   M R+G+     A++ L+  + +
Sbjct: 359 WGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCK 418

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
            GKL  A+ +  +M+   + P++   N  I  L    ++  A+     M   G++P+++T
Sbjct: 419 CGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIIT 478

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           YN LI GYC    + +A  L++ M   G +PD  +Y   +   C  +R+     +++++V
Sbjct: 479 YNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELV 538

Query: 309 N 309
           +
Sbjct: 539 S 539


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 150/586 (25%), Positives = 268/586 (45%), Gaps = 61/586 (10%)

Query: 103 LRSLKPRQI-CAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAK 161
           L +L+P  +   V + +++   AL+FF WA+      H    +  +  +L + ++   A 
Sbjct: 50  LPNLQPAHLEPVVFQLRSNPTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPAT 109

Query: 162 RVL-RLMARRG-IECRPE--------------AFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           RV  R++ + G +E   E               +S+L+  Y R G +  A+   + M K 
Sbjct: 110 RVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKM 169

Query: 206 AVAP---------NLLICNTAIHVLV---------------VGN------KLAKALRFLE 235
            V+          +LLI +  I V++               V N      ++ K L F  
Sbjct: 170 GVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHR 229

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            +   G+ P ++  N ++KG C  ++I  A    D M   G SP+ V++ T++   CKE 
Sbjct: 230 ALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKEL 289

Query: 296 RIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           R+ E   L   M+               N     G++EE   L +     G   DVV ++
Sbjct: 290 RLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFS 349

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
           ++++ + RVG+L +A ++  +M   G  PN V+Y+  +NGLC NG+ LEA  +     ++
Sbjct: 350 SIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQ 409

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+ +TYS ++ G  +   L +   +   M++KG  P  V  ++LI  L R+G MD A
Sbjct: 410 GLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEA 469

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            +F  + + +G  +N   F +LI G  +     + L +   M + K  PD VTYT ++  
Sbjct: 470 LRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKG 529

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR- 582
           L++ GR++EA  L  ++L KG  P  + Y T+I  +C+       L++ + M S      
Sbjct: 530 LAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPD 589

Query: 583 -TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
              YN +I      G +E   ++L ++++   + D  T + ++  Y
Sbjct: 590 ICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGY 635



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/554 (24%), Positives = 247/554 (44%), Gaps = 19/554 (3%)

Query: 123 VALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
           VA  FF   D   R    P  + +  ++ +  K      A  +  LM  +GI      +S
Sbjct: 258 VASDFF---DMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYS 314

Query: 181 YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
            L+    RAGKL     + SM     V  +++I ++ +   V    L KA+    RM   
Sbjct: 315 ILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE 374

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           GI+PNV+TY+ LI G C   R+ +A  +  ++  +G  P  ++Y +++   CK + +++ 
Sbjct: 375 GISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDG 434

Query: 301 RDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             L   M+               N    QG ++EA     Q  + G   +   + A+++G
Sbjct: 435 FGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG 494

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
             R+       KM   M  +   P+ V+YT  + GL   G+  EA  +     ++ ++P+
Sbjct: 495 CFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPD 554

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
            I Y  ++ G  ++   +    + + M   G FP     N+LI    REG ++   + ++
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLR 614

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E +  G   ++V + ++I G+C      +A+ L + +   +  P+ +T+T +IDA  K+G
Sbjct: 615 EIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDG 674

Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYN 586
           R+++A  +   ML +G  P ++TY  +I  Y +    E   +L EKML  +      +Y+
Sbjct: 675 RMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYS 734

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
            +I+ LC  G +EEA       +      D     +L+  Y   G    A  +   M   
Sbjct: 735 ILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVN 794

Query: 647 NLIPDLKLCKKVSE 660
            ++PD  L K ++E
Sbjct: 795 GIMPDDLLQKALAE 808


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 231/496 (46%), Gaps = 50/496 (10%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+  Y   G + +A+ +   + +  V PN+ I +  I        + KA     RM+  G
Sbjct: 333 LIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMG 392

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + P V   N L+KG+   + +++A  L+D     G +   V+Y  V+ +LC+  ++ E  
Sbjct: 393 LQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEAC 451

Query: 302 DLMEKMV-----------NDSNLFH-DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
           +L +KM+           N   L H  +G +++A E++N + + G  P+ +TYT ++ G 
Sbjct: 452 NLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGS 511

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
            + G+ + A  M  QM   G  P   ++ + +NGLC  G+  EAR+ +NT  ++ + P +
Sbjct: 512 FKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTS 571

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           +TY+ ++ G  +EG +  A  V REM +    P  +    LI   C+  KMD A K   +
Sbjct: 572 MTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDD 631

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY------------ 517
              KG  +++  + +LI GFC+  D+E A      +      P+T+ Y            
Sbjct: 632 MKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNN 691

Query: 518 -----------------------TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
                                  T++ID L K G++  A +L  +ML +G+VP +  Y  
Sbjct: 692 MEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNV 751

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I+  C  G++E+  K+L++M       T   YN +I      G L+EA ++  ++L   
Sbjct: 752 LINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKG 811

Query: 613 SKADASTCHVLVESYL 628
              D +T  +LV   L
Sbjct: 812 LVPDDTTYDILVNGKL 827



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 148/676 (21%), Positives = 277/676 (40%), Gaps = 107/676 (15%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQG-AKRVL------- 164
            +L  +AD R AL+FF   + +  +     V  ++L+IL+      G AK +L       
Sbjct: 67  TLLLHKADPRSALRFFKQVETKGGFAKTADVLCLLLQILASNPETHGDAKHLLNKYVFGD 126

Query: 165 -----RLMARRGIECR---------PEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
                +++    +EC             F+YL+++Y RA K+  A+     M +  V P 
Sbjct: 127 SAPAAKVLVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPW 186

Query: 211 LLICNTAIHVLV-----------------------------------VGNKLAKALRFLE 235
           +   N  +  ++                                    G K  +A R+  
Sbjct: 187 VPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFG 246

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
           +    G+  +  +Y+ +I+  C    +  A KL++     G  P + +Y  V+G   +  
Sbjct: 247 QAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLG 306

Query: 296 RIKEVRDLMEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYT 343
              E   L ++MV+          ++L      +G +  A  L +++ ++G  P+V  ++
Sbjct: 307 NFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFS 366

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            ++    ++G +++A ++  +M   G +P        L G       LE   ++     E
Sbjct: 367 VLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGF-RKQNLLENAYLLLDGAVE 425

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
               + +TY++V+  L   GK++EAC++  +M+ KG  P+ V  N +I   C++G MD A
Sbjct: 426 NGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDA 485

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            + M   +  G   N + +T L+ G  +KGD E A ++ D M      P   T+ +II+ 
Sbjct: 486 HEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIING 545

Query: 524 LSKNGRVEEATELMMKMLSKGLVPT----------------------------------- 548
           L K GRV EA + +   + +  +PT                                   
Sbjct: 546 LCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPN 605

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
           V+TY ++I+ +C+  +++  LK+ + M  K  +   T Y  +I   C    +E A K   
Sbjct: 606 VITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFS 665

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
           K+L      +    ++++ +Y N      A  +   M N  +  DLK+   + + L+ EG
Sbjct: 666 KLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEG 725

Query: 667 KSEEADTLMLRFVERG 682
           K   A  L    + RG
Sbjct: 726 KLSFALDLYSEMLCRG 741



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 205/463 (44%), Gaps = 50/463 (10%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
           ++ +++E  SK    + A  +   M   G++      ++L+  + +   L NA  +L   
Sbjct: 364 IFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGA 423

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC----- 257
            +  +A +++  N  +  L    K+ +A    ++M   GITP++++YN +I G+C     
Sbjct: 424 VENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCM 482

Query: 258 -DLHRIKDAI-----------------------------KLIDEMPLKGCSPDKVSYYTV 287
            D H + + I                              + D+M   G  P   ++ ++
Sbjct: 483 DDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSI 542

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGC 335
           +  LCK  R+ E RD +   +  S +            +  +G I+ A+ +  +M +   
Sbjct: 543 INGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEI 602

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
            P+V+TYT+++NGFC+  ++D A KM   M   G + +   Y   + G C       A +
Sbjct: 603 SPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACK 662

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI-NLLIQSL 454
             +   E   TPN I Y++++   R    +  A ++ +EM+     P  ++I   LI  L
Sbjct: 663 FFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKI-PCDLKIYTSLIDGL 721

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            +EGK+  A     E L +G   ++  +  LI G C  G LE A  +L +M      P  
Sbjct: 722 LKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTV 781

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           + Y T+I    K G ++EA  L  +ML KGLVP   TY  +++
Sbjct: 782 LLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 824



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 155/351 (44%), Gaps = 23/351 (6%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + + I Y +++E   K   C+ A  +   M   GI      F+ ++    + G++  A  
Sbjct: 498 KPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARD 557

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            L+   K +  P  +  N  I   V    +  A      M  + I+PNV+TY  LI G+C
Sbjct: 558 KLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFC 617

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
             +++  A+K+ D+M  KG   D   Y T++   CK          M+ M          
Sbjct: 618 KSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCK----------MQDM---------- 657

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
              E A +  +++ ++G  P+ + Y  +++ +  +  ++ A  + ++M ++    +   Y
Sbjct: 658 ---ENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIY 714

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T+ ++GL   GK   A ++ +        P+   Y+V+++GL   G+L  A  +++EM  
Sbjct: 715 TSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDG 774

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
               PT +  N LI    +EG +  A +   E L+KG   +   +  L+ G
Sbjct: 775 NNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 150/590 (25%), Positives = 260/590 (44%), Gaps = 107/590 (18%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y +M++ L + K  + A+  L L   R  +  P+  +Y  L+  +   GK+ +A Y
Sbjct: 291 DIYTYNIMIDKLCRIK--RSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHY 348

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG---------------- 241
           V + M +    P++    T I       ++ KAL  L  MQ+ G                
Sbjct: 349 VFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQILKSM 408

Query: 242 ----ITPNVLTY-------------------------------NCLIKGYCDLHRIKDAI 266
               I P+++TY                               NC+I  YC    I +A 
Sbjct: 409 LEDGIDPDIVTYSALINEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAF 468

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFH------ 315
            + D M   G SP+  +Y  ++  LC+   + + +  M  +++     D   F+      
Sbjct: 469 TVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGI 528

Query: 316 -DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G ++EA +L  +M +  C+PD+ TYT +++GFCR G++  A  MLQ M   G  P+T
Sbjct: 529 CKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDT 588

Query: 375 VSYTAFLNGLCHNGKSLEA-------------------------------------REMI 397
           V+YT  LNGL + G+   A                                     R M 
Sbjct: 589 VAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMS 648

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +  + E + PN+ +Y+++MHG  + G+ S++  + + MV+KG  P  V   LLI  L   
Sbjct: 649 DMYQSEVY-PNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSEC 707

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G +D A KF+++ + +G   + + F  LI  F +K  +  AL L + M   +  P + TY
Sbjct: 708 GLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTY 767

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-- 575
           + +I+ L +   ++++ E++ +ML  GL P    Y  +++  C+VG+++   +L E+M  
Sbjct: 768 SAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKA 827

Query: 576 LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           L       A + +I  LC  G LEEA  +   ++R+      +T   L+ 
Sbjct: 828 LGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMH 877



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 194/415 (46%), Gaps = 30/415 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLR-LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           D + Y  +L  L      + A  V + ++ + G+     A++ LM  Y + G +     +
Sbjct: 587 DTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRM 646

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +S M ++ V PN    N  +H  V G + +K+L   + M   GI P+ +TY  LI G  +
Sbjct: 647 MSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSE 706

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
              I  A+K +++M L+G  PD++ +  ++                         F ++ 
Sbjct: 707 CGLIDIAVKFLEKMVLEGIFPDRLVFDILI-----------------------TAFSEKS 743

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           ++  A +L N M  +   P   TY+A++NG  R   LDQ+ ++L++M   G +PN   Y 
Sbjct: 744 KMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYI 803

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           A +N  C  GK   A  +    +     P  +  S ++ GL + GKL EA  V   M++ 
Sbjct: 804 ALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRS 863

Query: 439 GFFPTPVEINLLIQSLCREGKMDGA---KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           G  PT      L+  LC+E K+  A   K+ M+ C  K   V+VV++  LI G C+   +
Sbjct: 864 GMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLK---VDVVSYNVLITGLCKDKRI 920

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
            +AL L ++M      P+  TY T+  A+   G ++   EL+  +  +GL+P  V
Sbjct: 921 SDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGLIPVYV 975



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/566 (22%), Positives = 252/566 (44%), Gaps = 51/566 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           +V+ ++++   K +    A   +  M   G +  P A + ++ A    G+ +     L  
Sbjct: 154 VVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRE 213

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
                   ++  CN  ++ L    +  KA   L++M+   ++ N +TYN ++  Y    R
Sbjct: 214 SLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLS-NSVTYNTILHWYVKKGR 272

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
            K A+ ++++M       D  +Y  ++  LC+ KR      L+++M  D           
Sbjct: 273 FKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNT 332

Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR------------------ 351
             N F  +G+I  A  + N M +   +P V TYT +++G+CR                  
Sbjct: 333 LINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITG 392

Query: 352 --VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
               E+ +AK++L+ M   G  P+ V+Y+A +N     G   EA            + ++
Sbjct: 393 VMPSEISKAKQILKSMLEDGIDPDIVTYSALIN----EGMITEAEHFRQYMSRMKISFDS 448

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           ++++ ++      G + EA  V   MV+ G  P       L++ LC+ G +  AK+FM  
Sbjct: 449 VSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFC 508

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            L+   A++   F +L+ G C+ G L+EAL L + M      PD  TYT ++    + G+
Sbjct: 509 LLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGK 568

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYN 586
           +  A  ++  ML KG+VP  V Y  +++     G+V+    + ++++ K+       AYN
Sbjct: 569 ILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYN 628

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI---PLLAYKVACRM 643
            ++      G +    +++  + ++    ++++ ++L+  Y+  G     L  YK    M
Sbjct: 629 SLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKY---M 685

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSE 669
             + + PD      V+ RL++ G SE
Sbjct: 686 VRKGIRPD-----NVTYRLLILGLSE 706



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 215/477 (45%), Gaps = 31/477 (6%)

Query: 125 LQFFYWADRQWRYRHDPIV--YYMMLEILSKTKLCQGAKRVLRLMARRGIECR---PEA- 178
           ++ F   D   RY H P V  Y  +L       LCQG   V    A++ + C    P A 
Sbjct: 465 VEAFTVYDAMVRYGHSPNVCTYQNLLR-----GLCQGGHLV---QAKQFMFCLLDIPSAI 516

Query: 179 ----FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
               F+ L++   + G L  A+ +   M K    P++      +       K+  AL  L
Sbjct: 517 DEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIML 576

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCK 293
           + M   G+ P+ + Y CL+ G  +  ++K A  +  E+  K G   D ++Y ++M    K
Sbjct: 577 QMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLK 636

Query: 294 EKRIKEVRDLMEKMVND---------SNLFHDQ---GRIEEAKELVNQMSQMGCIPDVVT 341
              I  ++ +M  M            + L H     G+  ++  L   M + G  PD VT
Sbjct: 637 GGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVT 696

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y  ++ G    G +D A K L++M   G  P+ + +   +       K   A ++ N  +
Sbjct: 697 YRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMK 756

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
               +P++ TYS +++GL R+  L ++ +V+REM++ G  P       L+ + CR GK+D
Sbjct: 757 WLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKID 816

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A +  +E    G     V  +S+IRG C+ G LEEA+ +   M      P   T+TT++
Sbjct: 817 RAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLM 876

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
             L K  ++ +A  L   M S  L   VV+Y  +I   C+  R+ D L L E+M SK
Sbjct: 877 HCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSK 933



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/388 (21%), Positives = 181/388 (46%), Gaps = 26/388 (6%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            D I Y  ++    K       KR++  M +  +     +++ LM  Y + G+   ++Y+ 
Sbjct: 623  DCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLY 682

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVG----NKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
              M +  + P+    N    +L++G      +  A++FLE+M L GI P+ L ++ LI  
Sbjct: 683  KYMVRKGIRPD----NVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITA 738

Query: 256  YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSN 312
            + +  ++ +A++L + M     SP   +Y  ++  L ++  + +  +++ +M+      N
Sbjct: 739  FSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPN 798

Query: 313  LFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
              H           G+I+ A  L  +M  +G +P  V  ++++ G C+ G+L++A  +  
Sbjct: 799  HTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFS 858

Query: 364  QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
             M   G  P   ++T  ++ LC   K  +A  +    E      + ++Y+V++ GL ++ 
Sbjct: 859  TMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDK 918

Query: 424  KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
            ++S+A D+  EM  KG +P       L  ++   G M   ++ +++   +G     V   
Sbjct: 919  RISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGLIPVYVQLE 978

Query: 484  SLIRGFCQKGDLEEALSLLDDMYLCKKD 511
            +L R       +E+A+  L+ +  C+K+
Sbjct: 979  NLER------QMEDAIRRLNMIRNCRKE 1000



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 140/318 (44%), Gaps = 11/318 (3%)

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N V +   +       K L+A   +   ++  +  + I  + ++  L  +G+       +
Sbjct: 152 NHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFL 211

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV-NVVNFTSLIRGFCQ 491
           RE +   F       N+L+ SLC  G+   A+  +Q+   K C + N V + +++  + +
Sbjct: 212 RESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM--KTCRLSNSVTYNTILHWYVK 269

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           KG  + AL +L+DM       D  TY  +ID L +  R   A  L+ +M    L+P   T
Sbjct: 270 KGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECT 329

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVL 609
           Y T+I+ +   G++     +   ML +    +   Y  +I+  C    +++A  +L ++ 
Sbjct: 330 YNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQ 389

Query: 610 RTAS-KADASTCHVLVESYLNKGI--PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
            T    ++ S    +++S L  GI   ++ Y     + N  +I + +  ++   R+ +  
Sbjct: 390 ITGVMPSEISKAKQILKSMLEDGIDPDIVTYSA---LINEGMITEAEHFRQYMSRMKISF 446

Query: 667 KSEEADTLMLRFVERGHI 684
            S   + ++  +  RG+I
Sbjct: 447 DSVSFNCIIDSYCHRGNI 464


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 231/501 (46%), Gaps = 25/501 (4%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R++ +  +   Y  ++ +L K++ C  A  V R M   G     + +S LMV   +   +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            + M +L  M+   + PN+      I VL    K+ +A   L+RM   G  P+V+TY  L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I   C   ++  A ++ ++M      PD+V+Y T++       R  + RDL         
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL------DRFSDNRDL--------- 344

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                   +  K+  ++M + G +PDVVT+T +V+  C+ G   +A   L  M   G  P
Sbjct: 345 --------DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N  +Y   + GL    +  +A E+    E     P A TY V +    + G    A +  
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            +M  KG  P  V  N  + SL + G+   AK+      + G   + V +  +++ + + 
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G+++EA+ LL +M     +PD +   ++I+ L K  RV+EA ++ M+M    L PTVVTY
Sbjct: 517 GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTY 576

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
            T++    + G++++ ++L E M+ K        +N + + LC    +  A K+L K++ 
Sbjct: 577 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD 636

Query: 611 TASKADASTCHVLVESYLNKG 631
                D  T + ++   +  G
Sbjct: 637 MGCVPDVFTYNTIIFGLVKNG 657



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 137/549 (24%), Positives = 240/549 (43%), Gaps = 22/549 (4%)

Query: 133  RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
            ++ + +   + Y  +L  L K    Q A  +   M ++G       F+ L     +  ++
Sbjct: 565  KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624

Query: 193  RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
              A+ +L  M      P++   NT I  LV   ++ +A+ F  +M+   + P+ +T   L
Sbjct: 625  TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTL 683

Query: 253  IKGYCDLHRIKDAIKLIDEMPLKGCS--PDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-- 308
            + G      I+DA K+I    L  C+  P  + +  ++G +  E  I       E++V  
Sbjct: 684  LPGVVKASLIEDAYKIITNF-LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVAN 742

Query: 309  -----NDSNLFH------DQGRIEEAKELVNQMSQ-MGCIPDVVTYTAVVNGFCRVGELD 356
                  DS L            +  A+ L  + ++ +G  P + TY  ++ G      ++
Sbjct: 743  GICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 802

Query: 357  QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
             A+ +  Q+   GC P+  +Y   L+    +GK  E  E+           N IT+++V+
Sbjct: 803  IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862

Query: 417  HGLRREGKLSEACDVVRE-MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
             GL + G + +A D+  + M  + F PT      LI  L + G++  AK+  +  L+ GC
Sbjct: 863  SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 922

Query: 476  AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
              N   +  LI GF + G+ + A +L   M      PD  TY+ ++D L   GRV+E   
Sbjct: 923  RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 982

Query: 536  LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENL 592
               ++   GL P VV Y  +I+   +  R+E+ L L  +M + +        YN +I NL
Sbjct: 983  YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL 1042

Query: 593  CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
               G +EEAGKI  ++ R   + +  T + L+  Y   G P  AY V   M      P+ 
Sbjct: 1043 GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1102

Query: 653  KLCKKVSER 661
               +++  R
Sbjct: 1103 GTYEQLPNR 1111



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 129/538 (23%), Positives = 230/538 (42%), Gaps = 62/538 (11%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +  R++ D + Y  +L+  S  +     K+    M + G       F+ L+ A  +AG  
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A   L +M+   + PNL   NT I  L+  ++L  AL     M+  G+ P   TY   
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I  Y        A++  ++M  KG +P+ V+    +  L K                   
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK------------------- 480

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                GR  EAK++   +  +G +PD VTY  ++  + +VGE+D+A K+L +M  +GC+P
Sbjct: 481 ----AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           + +   + +N L    +  EA +M    +E    P  +TY+ ++ GL + GK+ EA ++ 
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             MV+KG  P  +  N L   LC+  ++  A K + + ++ GC  +V  + ++I G  + 
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656

Query: 493 GDLEEAL---------------------------SLLDD--------MYLCKKDPDTVTY 517
           G ++EA+                           SL++D        +Y C   P  + +
Sbjct: 657 GQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFW 716

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY-CQVGRVEDLLKLLEKM- 575
             +I ++     ++ A     ++++ G+     +    I RY C+   V     L EK  
Sbjct: 717 EDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFT 776

Query: 576 --LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
             L  Q     YN +I  L     +E A  +  +V  T    D +T + L+++Y   G
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG 834



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 155/357 (43%), Gaps = 2/357 (0%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            G++EE   + + M +     D  TY  +       G L QA   L++M   G   N  S
Sbjct: 131 DGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYS 190

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   ++ L  +    EA E+      E + P+  TYS +M GL +   +     +++EM 
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
             G  P      + I+ L R GK++ A + ++   ++GC  +VV +T LI   C    L+
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            A  + + M   +  PD VTY T++D  S N  ++   +   +M   G VP VVT+  ++
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
              C+ G   +    L+ M  +        YN +I  L     L++A ++ G +     K
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
             A T  V ++ Y   G  + A +   +M  + + P++  C      L   G+  EA
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 141/578 (24%), Positives = 260/578 (44%), Gaps = 62/578 (10%)

Query: 136 RYRHDP----IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRA 189
           R RH P        ++L   S+  +   A    R +    + C P   S+  L+ A+ RA
Sbjct: 75  RLRHRPRFSESAALVVLSAFSRALMPDAALAAFRRLPSF-LGCNPGVRSHNALLDAFVRA 133

Query: 190 GKLRNAMYVLSMMQKAA----VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
            +  +A    + +   A    +APNL   N  +  L V   L +A+   + ++  G+ P+
Sbjct: 134 RRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPD 193

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
            +TY+ L+ G+   +R+ +A+ L+DEMP     PD V Y  ++G   +    ++   + E
Sbjct: 194 RITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWE 253

Query: 306 KMVNDS---------NLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           ++V D          N+  D     G  +EA ++  +M      PD++TY  +++G CR 
Sbjct: 254 QLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRS 313

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE----------------- 395
            ++D A ++  +M   G  P+ V Y + L G CH G+  EA +                 
Sbjct: 314 TDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYN 373

Query: 396 ----------MINTSEEEW--------WTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
                     M++ + + W         +P+ +T+S ++HGL  +G  +++  ++ E   
Sbjct: 374 IMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEART 433

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G        + +I  LC++G++D A K  ++        N   + +LI GFCQ     +
Sbjct: 434 SGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSD 493

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A+ +   M      P T+TY T+I  L K  +  EA+    +ML KG +  V TY ++I 
Sbjct: 494 AIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIR 553

Query: 558 RYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVL-RTASK 614
             C+  +++  L L  ++L K  Q     +N +I  LCS G ++EA ++L ++  +    
Sbjct: 554 GLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCC 613

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
            +  T + L++ +   G    A  +   +    L+PD+
Sbjct: 614 PNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDI 651



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 237/513 (46%), Gaps = 51/513 (9%)

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           RG+      +S LM  + +  +L NA+Y+L  M    V P+ +  N  +       +  K
Sbjct: 188 RGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEK 247

Query: 230 ALRFLERM-QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           A+R  E++ +  G +PN+ TYN ++ G C L   K+A  + + M      PD ++Y T++
Sbjct: 248 AMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMI 307

Query: 289 GYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGC- 335
             LC+   +     +  +M+    +            F   GR+ EA +  + MS  G  
Sbjct: 308 HGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR 367

Query: 336 ----------------------------------IPDVVTYTAVVNGFCRVGELDQAKKM 361
                                              PD+VT++ +++G C  G  +++ ++
Sbjct: 368 NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQI 427

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L++    G + +  SY++ ++GLC +G+  +A ++      + + PN+  Y+ +++G  +
Sbjct: 428 LEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQ 487

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
             K S+A  V  +M +    PT +  N LI  LC+  K   A +F +E L KGC ++V  
Sbjct: 488 ASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNT 547

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           + SLIRG C+   ++ AL+L + +       D V +  +I  L   G+V+EA++L+ +M 
Sbjct: 548 YGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMK 607

Query: 542 SK-GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYL 598
            K    P VVTY T++  + + G  +    L   +L         +YN  I+ LCS    
Sbjct: 608 EKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRT 667

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            E  ++L ++L +     A T ++LV + +  G
Sbjct: 668 PEGVQLLNEMLASGIIPTAITWNILVRAVIKYG 700



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 211/439 (48%), Gaps = 17/439 (3%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y +ML+ L K  + + A  V   M     +     +  ++    R+  + +A  V S M
Sbjct: 267 TYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEM 326

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            K  + P+++I N+ +       ++ +A +F + M ++GI  NV +YN ++KG  D   +
Sbjct: 327 IKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMV 385

Query: 263 KDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND----------- 310
             A  L + +      SPD V++ T++  LC++    +   ++E+               
Sbjct: 386 DKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSS 445

Query: 311 --SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
             S L  D GR+++A +L  ++S     P+   Y A++NGFC+  +   A ++  QM  +
Sbjct: 446 MISGLCKD-GRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEN 504

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
            C P T++Y   ++GLC   K LEA        E+    +  TY  ++ GL R+ K+  A
Sbjct: 505 DCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGA 564

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG-CAVNVVNFTSLIR 487
             +  +++ KG     V  N+LI  LC  GK+D A + + E   K  C  NVV + +L+ 
Sbjct: 565 LALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMD 624

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GF + G  ++A SL   +      PD ++Y T I  L    R  E  +L+ +ML+ G++P
Sbjct: 625 GFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIP 684

Query: 548 TVVTYRTVIHRYCQVGRVE 566
           T +T+  ++    + G ++
Sbjct: 685 TAITWNILVRAVIKYGPIQ 703



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 143/299 (47%), Gaps = 13/299 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  M+  L +      + ++L      G E    ++S ++    + G+L +A+ + 
Sbjct: 404 DMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLY 463

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +   +  PN  I N  I+     +K + A+R   +M     +P  +TYN LI G C  
Sbjct: 464 EKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKA 523

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RDLMEKMVND 310
            +  +A +   EM  KGC  D  +Y +++  LC++K+I            + L   +V  
Sbjct: 524 EKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMH 583

Query: 311 SNLFH---DQGRIEEAKELVNQMSQMG-CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
           + L H     G+++EA +L+++M +   C P+VVTY  +++GF   G  D+A  +   + 
Sbjct: 584 NILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAIL 643

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
            +G  P+ +SY   + GLC   ++ E  +++N        P AIT+++++  + + G +
Sbjct: 644 ENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPI 702


>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 241/500 (48%), Gaps = 37/500 (7%)

Query: 120 DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRG---IECRP 176
           D   ALQFF WA ++  Y H    Y+ MLEIL + +    A+  L  + +R    ++   
Sbjct: 91  DTSKALQFFNWA-QEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEA 149

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
             F+ LM  ++RAG  + ++ V ++M+   V+P+++  N+ + +L+   +   A +  + 
Sbjct: 150 RFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDE 209

Query: 237 M-QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
           M    G+TP+  T+N LI+G+C    + D  ++ +++   GC PD V+Y T++  LC+  
Sbjct: 210 MLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAG 269

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
           ++    ++++ M   S                     +   P+VVTYT ++ G+C   E+
Sbjct: 270 KVTVAYNVVKGMGKKS---------------------VDLNPNVVTYTTLIRGYCAKREI 308

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI-NTSEEEWWTPNAITYSV 414
           ++A  + ++M + G K N ++Y   + GLC   K  + ++++  T+ +  ++P+  T++ 
Sbjct: 309 EKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNT 368

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK- 473
           +MH     G L +A  V   M +    P     + L++SLC+ G  + A+  + + L + 
Sbjct: 369 LMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERK 428

Query: 474 ------GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
                 GC   V  +  + +  C+ G  ++A      + + +   D  +Y T+I    K 
Sbjct: 429 ILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQL-MRRGTQDPPSYKTLIMGHCKE 487

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAY 585
           G  E   EL++ ML K   P   TY ++I+    + +    L+ LEKML  S +   + +
Sbjct: 488 GTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTF 547

Query: 586 NQVIENLCSFGYLEEAGKIL 605
           + ++  L   G   E+  ++
Sbjct: 548 HSILAKLLEQGRASESASLI 567



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/550 (21%), Positives = 231/550 (42%), Gaps = 34/550 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVL-RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           + +  +L IL K      AK+V   +++  G+      F+ L+  +   G + +   + +
Sbjct: 185 VTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFN 244

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM--QLAGITPNVLTYNCLIKGYCD 258
            + +    P+++  NT +  L    K+  A   ++ M  +   + PNV+TY  LI+GYC 
Sbjct: 245 DLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCA 304

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
              I+ A+ + +EM  +G   + ++Y T++  LC+ ++ ++++D++E    D        
Sbjct: 305 KREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTF----- 359

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
                             PD  T+  +++  C  G LD A K+ ++M     +P++ +Y+
Sbjct: 360 -----------------SPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYS 402

Query: 379 AFLNGLCHNGKSLEAREMINTSEE-------EWWTPNAITYSVVMHGLRREGKLSEACDV 431
           A +  LC  G   +A ++++   E       +   P    Y+ +   L   GK  +A   
Sbjct: 403 ALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKA 462

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
            R+++++G    P     LI   C+EG  +   + +   L K    +   + SLI G   
Sbjct: 463 FRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLH 521

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
                 AL  L+ M      P++ T+ +I+  L + GR  E+  L+  ML K +    ++
Sbjct: 522 MDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQN-LS 580

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           + T   R      + D    L  +L  +       ++I  LC    + +  K+L   L +
Sbjct: 581 FSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSLES 640

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
               D   C+ ++           A+ +  ++    +   L    ++   L   GK EEA
Sbjct: 641 HQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLKAGGKLEEA 700

Query: 672 DTLMLRFVER 681
           +++  R   R
Sbjct: 701 ESVQKRMERR 710



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 6/276 (2%)

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           ++ +M    R G   E+  V   M   G  P+ V  N L+  L + G+ + AKK   E L
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211

Query: 472 NK-GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           +  G   +   F  LIRGFC  G +++   + +D+     +PD VTY T++D L + G+V
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271

Query: 531 EEATELMMKMLSKG--LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYN 586
             A  ++  M  K   L P VVTY T+I  YC    +E  L + E+M+++  +     YN
Sbjct: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331

Query: 587 QVIENLCSFGYLEEAGKIL-GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
            +I+ LC     E+   IL G         D  T + L+  + + G    A KV  RM  
Sbjct: 332 TLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSE 391

Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
             + PD      +   L   G  E+A+ L+ + +ER
Sbjct: 392 LKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLER 427


>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 756

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 148/651 (22%), Positives = 285/651 (43%), Gaps = 78/651 (11%)

Query: 81  VCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHD 140
           +CR+++ R AW+ +L+  +R+L+       +  VL        ALQFF W +R    RHD
Sbjct: 90  ICRMMDNR-AWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHD 148

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
              +  M+++L + +    A+ +L  M  +G+    + F  L+ +Y +AG ++ ++ +  
Sbjct: 149 RDTHMKMIKMLGEVQKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQ 208

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M+   V   +   NT   V++   +   A R+  +M   G+ P   TYN ++ G+    
Sbjct: 209 KMKDLGVERTIKSYNTLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSL 268

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
           R++ A++  D+M  +G SPD V+Y T++   C+ K                       ++
Sbjct: 269 RLETALRFFDDMKTRGISPDAVTYNTIINGYCRFK-----------------------KM 305

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           +EA++L  +M      P VVTYT ++ G+  V  +D   ++ ++M   G +PN  +Y+  
Sbjct: 306 DEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSVDRVDDGLRIFEEMRSFGIEPNATTYSTL 365

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTP--NAITYSVVMHGLRREGKLSEACDVVREM--- 435
           L GLC  GK +EA+ ++     +   P  N+I   +++    + G ++ A +V++ M   
Sbjct: 366 LPGLCDVGKMVEAKNILKNMMAKHIAPKDNSIFLKLLV-SQSKAGDMAAATEVLKAMATL 424

Query: 436 ---VKKGFFPT-------------------------------------PVEINLLIQSLC 455
               + G +                                       P   N +I+ LC
Sbjct: 425 NVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLC 484

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
             G+   A+   ++ + +G   +     +LIRG  ++G+ E +  +L  M       +  
Sbjct: 485 NNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPESSYEILKIMSRRGVPREAN 543

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
            Y  +I +    G   +A   +  M+  G VP    +R+VI    + GRV+   +++  M
Sbjct: 544 AYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSALFRSVIESLFEDGRVQTASRVMMIM 603

Query: 576 LSK----QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           + K    +       +++E L   G++EEA   LG++         +    L+     KG
Sbjct: 604 IDKNVGIEDNMDLIAKILEALLMRGHVEEA---LGRIDLLNQNGHTADLDSLLSVLSEKG 660

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             + A K+      R+L  D     KV + L+  GK+  A +++ + +E+G
Sbjct: 661 KTIAALKLLDFGLERDLSLDFSSYDKVLDALLGAGKTLNAYSVLCKIMEKG 711


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 204/413 (49%), Gaps = 36/413 (8%)

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L+K + FL      GI  ++ + + LI  +C LHR+   + ++ ++   G  P  V++ T
Sbjct: 84  LSKEIEFL------GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTT 137

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LC E                       G++++   L + M   G  P+V TY  ++
Sbjct: 138 LLNGLCME-----------------------GKMDQVMMLYDDMLVRGLQPNVYTYNVII 174

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           N   + G+ ++A   L+QM   GC PN V+Y+  ++G C  G+  EAR + +    +  T
Sbjct: 175 NSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCT 234

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN  TY+ +M+G  +  ++ EA  ++ E ++KG  P  V    +I  LCR G+   A++ 
Sbjct: 235 PNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQL 294

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +     G   N++ +  L+ G C+ G+LEEA +L  +M      P+ V YT +ID+L K
Sbjct: 295 FRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCK 354

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----LSKQKCR 582
            G++++  EL  +++ +GL P V TY  ++   C+ G + +  KL  KM     +  KC 
Sbjct: 355 CGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKC- 413

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
            AYN +I+          A +++ +++     ADA+T   L+  +    IP L
Sbjct: 414 -AYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT-RALLNDFPTNDIPAL 464



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 189/381 (49%), Gaps = 23/381 (6%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           GIE    + S L+  +    ++   + VLS + K  + P+++   T ++ L +  K+ + 
Sbjct: 92  GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQV 151

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           +   + M + G+ PNV TYN +I       +  +A+  + +M   GC P+ V+Y T++  
Sbjct: 152 MMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            C                        +G+++EA+ + + M   GC P+V TYT+++NG+C
Sbjct: 212 YCL-----------------------RGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYC 248

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           ++  +++A ++L +    G  P+ V++T  ++GLC  G+ L A+++         TPN +
Sbjct: 249 KIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIM 308

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY V++ GL + G L EA  + +EM +    P  V   +LI SLC+ GK+   K+     
Sbjct: 309 TYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRL 368

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           +++G   NV  +T+L+   C++G + EA  L   M      PD   Y  II    ++   
Sbjct: 369 IDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDP 428

Query: 531 EEATELMMKMLSKGLVPTVVT 551
             A +L+ +M+++G      T
Sbjct: 429 SMARQLVEEMVNRGFSADAAT 449



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 193/387 (49%), Gaps = 10/387 (2%)

Query: 296 RIKEVRDLMEKMVNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           R+  +R  +  +V  S LF      G  E    L  ++  +G   D+ + + ++N FC +
Sbjct: 51  RLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHL 110

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
             +D    +L ++   G +P+ V++T  LNGLC  GK  +   + +        PN  TY
Sbjct: 111 HRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTY 170

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           +V+++ L + GK +EA   +++M K G  P  V  + LI   C  G+MD A+      ++
Sbjct: 171 NVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVS 230

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           KGC  NV  +TSL+ G+C+   +EEA+ LLD+       PD VT+TTII  L + GR   
Sbjct: 231 KGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLA 290

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIE 590
           A +L   + + G  P ++TY  ++   C+ G +E+   L ++M   + +     Y  +I+
Sbjct: 291 AQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILID 350

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
           +LC  G +++  ++  +++    K +  T   LV +   +G+ + A+K+  +M      P
Sbjct: 351 SLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTP 410

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLR 677
           D     K +  +I++G  +  D  M R
Sbjct: 411 D-----KCAYNVIIQGFLQHKDPSMAR 432



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 170/343 (49%), Gaps = 23/343 (6%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           VL  + + G+E     F+ L+      GK+   M +   M    + PN+   N  I+ L 
Sbjct: 119 VLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLS 178

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              K  +AL FL++M+  G  PNV+ Y+ LI GYC   ++ +A  + D M  KGC+P+  
Sbjct: 179 KSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVY 238

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           +Y ++M   CK +                       RIEEA +L+++  + G +PD+VT+
Sbjct: 239 TYTSLMNGYCKIE-----------------------RIEEAVQLLDETLRKGLVPDIVTF 275

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           T +++G CR G    A+++ + +  HG  PN ++Y   L+GLC +G   EA  +    + 
Sbjct: 276 TTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQR 335

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               PN + Y++++  L + GK+ +  ++   ++ +G  P       L+ +LC+EG +  
Sbjct: 336 STVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIE 395

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
           A K  ++    GC  +   +  +I+GF Q  D   A  L+++M
Sbjct: 396 AHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEM 438



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 157/308 (50%), Gaps = 23/308 (7%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  RG++     ++ ++ + S++GK   A+  L  M+K    PN++  +T I    +  +
Sbjct: 158 MLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQ 217

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +A    + M   G TPNV TY  L+ GYC + RI++A++L+DE   KG  PD V++ T
Sbjct: 218 MDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTT 277

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LC+                        GR   A++L   +   G  P+++TY  ++
Sbjct: 278 IISGLCRA-----------------------GRPLAAQQLFRYICAHGHTPNIMTYGVLL 314

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G C+ G L++A  + Q+M     KPN V YT  ++ LC  GK  + +E+ +   +E   
Sbjct: 315 DGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLK 374

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN  TY+ ++  L +EG + EA  + R+M + G  P     N++IQ   +      A++ 
Sbjct: 375 PNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQL 434

Query: 467 MQECLNKG 474
           ++E +N+G
Sbjct: 435 VEEMVNRG 442



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 175/349 (50%), Gaps = 2/349 (0%)

Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
           +P +V ++ + +   R+G  +    + +++   G + +  S +  +N  CH  +      
Sbjct: 59  LPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLS 118

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           +++   +    P+ +T++ +++GL  EGK+ +   +  +M+ +G  P     N++I SL 
Sbjct: 119 VLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLS 178

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           + GK + A  F+++    GC  NVVN+++LI G+C +G ++EA S+ D M      P+  
Sbjct: 179 KSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVY 238

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TYT++++   K  R+EEA +L+ + L KGLVP +VT+ T+I   C+ GR     +L   +
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI 298

Query: 576 LSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
            +         Y  +++ LC  G LEEA  +  ++ R+  K +     +L++S    G  
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
               ++  R+ +  L P++     +   L  EG   EA  L  +  E G
Sbjct: 359 KDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDG 407



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 139/299 (46%), Gaps = 27/299 (9%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSM 201
           Y +++  LSK+     A   L+ M + G  C P   +Y  L+  Y   G++  A  V  +
Sbjct: 170 YNVIINSLSKSGKANEALGFLKQMEKVG--CVPNVVNYSTLIDGYCLRGQMDEARSVFDL 227

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M      PN+    + ++      ++ +A++ L+     G+ P+++T+  +I G C   R
Sbjct: 228 MVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGR 287

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
              A +L   +   G +P+ ++Y  ++  LCK                        G +E
Sbjct: 288 PLAAQQLFRYICAHGHTPNIMTYGVLLDGLCK-----------------------HGNLE 324

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA  L  +M +    P++V YT +++  C+ G++   K++  ++   G KPN  +YTA +
Sbjct: 325 EAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALV 384

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
             LC  G  +EA ++    EE+  TP+   Y+V++ G  +    S A  +V EMV +GF
Sbjct: 385 GALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGF 443



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 5/283 (1%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P  + +S +   + R G       + +E+   G       +++LI   C   ++D     
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           + + L  G   ++V FT+L+ G C +G +++ + L DDM +    P+  TY  II++LSK
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--- 583
           +G+  EA   + +M   G VP VV Y T+I  YC  G++++   + + M+SK  C     
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSK-GCTPNVY 238

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            Y  ++   C    +EEA ++L + LR     D  T   ++      G PL A ++   +
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI 298

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
                 P++     + + L   G  EEA  L  + ++R  ++P
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFAL-FQEMQRSTVKP 340



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 110/260 (42%), Gaps = 4/260 (1%)

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A    R M+ +   P  VE + L  S+ R G  +      +E    G   ++ + + LI
Sbjct: 45  DALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILI 104

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
             FC    ++  LS+L  +     +P  VT+TT+++ L   G++++   L   ML +GL 
Sbjct: 105 NCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQ 164

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGK 603
           P V TY  +I+   + G+  + L  L++M  K  C      Y+ +I+  C  G ++EA  
Sbjct: 165 PNVYTYNVIINSLSKSGKANEALGFLKQM-EKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           +   ++      +  T   L+  Y        A ++      + L+PD+     +   L 
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 664 LEGKSEEADTLMLRFVERGH 683
             G+   A  L       GH
Sbjct: 284 RAGRPLAAQQLFRYICAHGH 303



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 75/170 (44%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + +  ++  L +      A+++ R +   G       +  L+    + G L  A  + 
Sbjct: 271 DIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALF 330

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             MQ++ V PNL+I    I  L    K+        R+   G+ PNV TY  L+   C  
Sbjct: 331 QEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKE 390

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
             I +A KL  +M   GC+PDK +Y  ++    + K     R L+E+MVN
Sbjct: 391 GLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVN 440


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 140/571 (24%), Positives = 265/571 (46%), Gaps = 30/571 (5%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y  +++ L + +  + A   LR    + I     +F+ +M +Y + G +  A      + 
Sbjct: 209 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVL 268

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
           K  + P++   N  I+ L +   +A+AL     M   G+ P+ +TYN L+KG+  L  I 
Sbjct: 269 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMIS 328

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK--------------EVRDLMEKMVN 309
            A ++I +M  KG SPD ++Y  ++   C+   I               E++ ++   V 
Sbjct: 329 GAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVM 388

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
            S L    GR++EA  L   +   G  PD+V Y+ V++G C++G+ D A ++  +M +  
Sbjct: 389 LSGLCK-TGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKR 447

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             PN+ +  A + GLC  G  LEAR ++++      T + I Y++V+ G  + G + EA 
Sbjct: 448 ILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEAL 507

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           ++ +  ++ G  P     N LI   C+   +  A+K +      G   +VV++T+L+  +
Sbjct: 508 ELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAY 567

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK---------- 539
              G ++    L  +M      P  VTY+ I   L +  ++E   +++ +          
Sbjct: 568 ANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVL 627

Query: 540 --MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSF 595
             M S+G+ P  +TY T+I   C+V  +    +L +KM S+    T+  YN +I++LC +
Sbjct: 628 RDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIY 687

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLC 655
           G + +A + L  + +            +++++  KG P +A  +  ++ +R     ++  
Sbjct: 688 GCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDY 747

Query: 656 KKVSERLILEGKSEEADTLMLRFVERGHIQP 686
             V  RL     + E+       + RG I P
Sbjct: 748 SAVINRLCRRHLAIESKYFFCLMLSRG-ISP 777



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 227/500 (45%), Gaps = 40/500 (8%)

Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR 162
           LR +    I A L S++ + +++ FF      + +RH      ++  I +  +  +  + 
Sbjct: 58  LRQIHVEDIMAELMSESSD-LSVWFFKELRDIYGFRHSRFSTLLVSHIFAGQRRFKELQV 116

Query: 163 VL-RLMARRGIECRPEAFSY------------LMVAYSRAGKLRNAMYVLSMMQKAAVAP 209
           +L +L+   G  C   + S+            L+   SR   +  ++Y+L  M+   +  
Sbjct: 117 ILEQLLQEEGKLCELLSNSFRKWESTGLVWDMLLFLSSRLRMVDESLYILKKMKDRNLNV 176

Query: 210 NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
           +    N+ ++     +K+    + ++         N  TY+ ++ G C   +++DA+  +
Sbjct: 177 STQSYNSVLYNFRETDKMWDVYKEIK-------DKNEHTYSTVVDGLCRQQKLEDAVLFL 229

Query: 270 DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL--------MEKMVNDSNLFHDQ---- 317
                K   P  VS+ ++M   CK   +   +          +   V   N+  +     
Sbjct: 230 RTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLV 289

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G I EA EL + M++ G  PD VTY  +V GF  +G +  A +++Q M   G  P+ ++Y
Sbjct: 290 GSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITY 349

Query: 378 TAFLNGLCHNGKS----LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
           T  L G C  G      +  ++M++   E     + I YSV++ GL + G++ EA  +  
Sbjct: 350 TILLCGQCQLGNIDMGLILLKDMLSRGFE---LKSIIPYSVMLSGLCKTGRVDEALSLFY 406

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           ++   G  P  V  +++I  LC+ GK D A +   E   K    N     +++ G CQKG
Sbjct: 407 DLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKG 466

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            L EA SLLD +       D + Y  +ID  +K+G +EEA EL    +  G+ P V T+ 
Sbjct: 467 MLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFN 526

Query: 554 TVIHRYCQVGRVEDLLKLLE 573
           ++I+ YC+   + +  K+L+
Sbjct: 527 SLIYGYCKTQNIAEARKILD 546



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/502 (21%), Positives = 220/502 (43%), Gaps = 38/502 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y ++++      +  GA  V++ M  +G+      ++ L+    + G +   + +L
Sbjct: 310 DSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILL 369

Query: 200 -SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
             M+ +     +++  +  +  L    ++ +AL     ++  G+TP+++ Y+ +I G C 
Sbjct: 370 KDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCK 429

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL----- 313
           L +   A+++ DEM  K   P+  +   +M  LC++  + E R L++ +++  +      
Sbjct: 430 LGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIIL 489

Query: 314 -------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                  +   G IEEA EL     + G  P+V T+ +++ G+C+   + +A+K+L  + 
Sbjct: 490 YNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIK 549

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
            +G  P+ VSYT  ++   + G      E+    + E   P  +TYSV+  GL R  KL 
Sbjct: 550 LYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLE 609

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
               V+RE + + F                          +++  ++G   + + + ++I
Sbjct: 610 NCNQVLRERILEKF-----------------------NHVLRDMESEGITPDQITYNTII 646

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           +  C+   L  A  L   M     DP + TY  +ID+L   G + +A   +  +  + + 
Sbjct: 647 QYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVS 706

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKI 604
            +   Y TVI  +C  G  E  + L  ++L +    +   Y+ VI  LC      E+   
Sbjct: 707 LSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYF 766

Query: 605 LGKVLRTASKADASTCHVLVES 626
              +L      D   C V+++S
Sbjct: 767 FCLMLSRGISPDLDICEVMIKS 788



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 182/411 (44%), Gaps = 22/411 (5%)

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI-EEAKELVNQMSQMG 334
           G    + S   V      ++R KE++ ++E+      L  ++G++ E       +    G
Sbjct: 90  GFRHSRFSTLLVSHIFAGQRRFKELQVILEQ------LLQEEGKLCELLSNSFRKWESTG 143

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            + D++ + +      R+  +D++  +L++M       +T SY + L       K  +  
Sbjct: 144 LVWDMLLFLS-----SRLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVY 198

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           + I    E        TYS V+ GL R+ KL +A   +R    K   P+ V  N ++ S 
Sbjct: 199 KEIKDKNEH-------TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSY 251

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G +D AK F    L  G   +V +   LI G C  G + EAL L  DM     +PD+
Sbjct: 252 CKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS 311

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VTY  ++      G +  A E++  ML KGL P V+TY  ++   CQ+G ++  L LL+ 
Sbjct: 312 VTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKD 371

Query: 575 MLSKQ---KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           MLS+    K    Y+ ++  LC  G ++EA  +   +       D     +++      G
Sbjct: 372 MLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLG 431

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              +A +V   M  + ++P+ +    +   L  +G   EA +L+   +  G
Sbjct: 432 KFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSG 482



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 97/436 (22%), Positives = 172/436 (39%), Gaps = 71/436 (16%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           AL  FY  +  +    D + Y +++  L K      A RV   M  + I         +M
Sbjct: 401 ALSLFYDLE-AYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIM 459

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
           +   + G L  A  +L  +  +    ++++ N  I        + +AL   +    +GIT
Sbjct: 460 LGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGIT 519

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           PNV T+N LI GYC    I +A K++D + L G  P  VSY T+M               
Sbjct: 520 PNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLM--------------- 564

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                   + + + G I+  +EL  +M   G  P  VTY+ +  G CR  +L+   ++L+
Sbjct: 565 --------DAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLR 616

Query: 364 Q------------MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
           +            M   G  P+ ++Y   +  LC       A E+    + +   P + T
Sbjct: 617 ERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSAT 676

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y++++                                    SLC  G +  A +F+    
Sbjct: 677 YNILI-----------------------------------DSLCIYGCIRKADRFLYSLQ 701

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
            +  +++   +T++I+  C KGD E A+ L + +     +     Y+ +I+ L +     
Sbjct: 702 KRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAI 761

Query: 532 EATELMMKMLSKGLVP 547
           E+      MLS+G+ P
Sbjct: 762 ESKYFFCLMLSRGISP 777


>gi|414865591|tpg|DAA44148.1| TPA: hypothetical protein ZEAMMB73_616668 [Zea mays]
          Length = 838

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 234/480 (48%), Gaps = 39/480 (8%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           + A  VL+ M++R         + L+VAYS+ GK+ +A+ +L  M+   + PN    +  
Sbjct: 225 EDASAVLQRMSKRAW-VDEHVLTMLIVAYSKWGKVEDAVELLGRMEALDMRPNEKTLSVL 283

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +H L    ++  A+    +M   G + ++  Y+ LI+G C  + +  A+KL ++M     
Sbjct: 284 VHGLARQGRVDVAMNMFGKMASYGFSVDLAMYSVLIEGLCHGNEMGKAVKLFEDMKRDRI 343

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRD---------------LMEKMVNDSNLFHDQGRIEE 322
           +PD      ++   C++     V                 L+  ++ D  + H  G +E 
Sbjct: 344 TPDVRLLKKIIEAFCRQGDFSTVGPFINENAVHLKPGSAVLLYNVILDGLINH--GEVEA 401

Query: 323 AKELVNQM----------SQMG---------CIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
           A +L++ M            +G           P+  ++  VV G C+V +LD A  + +
Sbjct: 402 AYQLLSSMVRGDQRVSDDDTVGVHIFVITEDVKPNSDSFNIVVCGLCKVKKLDLALALTK 461

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
            M   GCK   + +   +  LC++GK  EA E+ N  ++    P+  TY+ +++G+ R  
Sbjct: 462 DMVGLGCKGKLLMFNDLILELCNSGKLDEAYEIFNQMKDLGLKPSEFTYNSLLYGICRRK 521

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
             S A D++REM      P       ++Q LC  G++  A +F+   L  G   ++V ++
Sbjct: 522 DTSAAADLLREMRANAHKPWIKNCTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYS 581

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           + + G C+ GD+E AL L  D+      PD V +  +I+   K G+ +EA E+M +MLSK
Sbjct: 582 AAMNGMCKVGDIENALGLFLDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSK 641

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEA 601
           G++P+VVTY  +I  +C+ G ++  +  + KM+ ++K  T   Y  +++ LC+ G  +EA
Sbjct: 642 GMLPSVVTYNLMIDIWCKSGSIDKAITCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEA 701



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 232/514 (45%), Gaps = 72/514 (14%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R W   H   V  M++   SK    + A  +L  M    +    +  S L+   +R G++
Sbjct: 237 RAWVDEH---VLTMLIVAYSKWGKVEDAVELLGRMEALDMRPNEKTLSVLVHGLARQGRV 293

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV------ 246
             AM +   M     + +L + +  I  L  GN++ KA++  E M+   ITP+V      
Sbjct: 294 DVAMNMFGKMASYGFSVDLAMYSVLIEGLCHGNEMGKAVKLFEDMKRDRITPDVRLLKKI 353

Query: 247 ------------------------------LTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
                                         L YN ++ G  +   ++ A +L+  M ++G
Sbjct: 354 IEAFCRQGDFSTVGPFINENAVHLKPGSAVLLYNVILDGLINHGEVEAAYQLLSSM-VRG 412

Query: 277 --------------------CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN---- 312
                                 P+  S+  V+  LCK K++     L + MV        
Sbjct: 413 DQRVSDDDTVGVHIFVITEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKL 472

Query: 313 -LFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
            +F+D        G+++EA E+ NQM  +G  P   TY +++ G CR  +   A  +L++
Sbjct: 473 LMFNDLILELCNSGKLDEAYEIFNQMKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLRE 532

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M  +  KP   + T  +  LC +G+  EA + ++   E  + P+ +TYS  M+G+ + G 
Sbjct: 533 MRANAHKPWIKNCTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGD 592

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           +  A  +  ++  K + P  V  N+LI    + GK D A++ M+E L+KG   +VV +  
Sbjct: 593 IENALGLFLDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNL 652

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           +I  +C+ G +++A++ +  M   +K P  VTYT+++D L   GR +EA  L  KM  KG
Sbjct: 653 MIDIWCKSGSIDKAITCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIVLWCKMREKG 712

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
             P  + Y  +++  C+ GR+E  +   E+M +K
Sbjct: 713 CSPNGIAYTALVNGLCKCGRMETAVNYYEEMKTK 746



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 173/352 (49%), Gaps = 12/352 (3%)

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           V PN    N  +  L    KL  AL   + M   G    +L +N LI   C+  ++ +A 
Sbjct: 433 VKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSGKLDEAY 492

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHD- 316
           ++ ++M   G  P + +Y +++  +C+ K      DL+ +M          N +++    
Sbjct: 493 EIFNQMKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDMVQQL 552

Query: 317 --QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              GRI EA + ++ M ++G +PD+VTY+A +NG C+VG+++ A  +   +      P+ 
Sbjct: 553 CLSGRITEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIENALGLFLDISSKCYLPDV 612

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V++   +NG    GK  EA+E++     +   P+ +TY++++    + G + +A   V +
Sbjct: 613 VAHNILINGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKSGSIDKAITCVYK 672

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M+ +   PT V    L+  LC  G+ D A     +   KGC+ N + +T+L+ G C+ G 
Sbjct: 673 MIDEEKPPTVVTYTSLLDGLCNAGRPDEAIVLWCKMREKGCSPNGIAYTALVNGLCKCGR 732

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           +E A++  ++M     D D  +   + + L   G+  +  EL+  +L K +V
Sbjct: 733 METAVNYYEEMKTKGFDLDIFSLLNLTNLLIAQGQASKGCELLKVVLQKDVV 784



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 159/710 (22%), Positives = 278/710 (39%), Gaps = 84/710 (11%)

Query: 47  FMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSL 106
             +L SF     +               H L+ E  R    R A        LR L   L
Sbjct: 13  LFLLQSFATTTASSSPAATTTSSPGFLAHHLLDEFSRPRATRDA------ARLRRLAAYL 66

Query: 107 KPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRL 166
            P    +V+      R AL FF WA  Q  +RH       M  +L   +     +     
Sbjct: 67  TPPAAESVILRLPSWRHALDFFRWAAEQPGFRHSCYSLNAMASLLPPHQRAHLDRLATDA 126

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA-AVAPNLLICNTAIHVLVVGN 225
           +  R     P A  +L+     AG    A  V    +   + APN    N  +  L    
Sbjct: 127 LVSR-CSMTPGALGFLLRRLGAAGLPDTAARVFDAAKTTLSCAPNSYTYNCLLDALAKAG 185

Query: 226 KLAKALRFLERMQLAGITPNV--LTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
           +   A   L+ M +     +V   T   L++ YC+  R +DA  ++  M  +    + V 
Sbjct: 186 RAEDAEARLQEMVVTCGDESVDRYTLTSLLQCYCNAGRPEDASAVLQRMSKRAWVDEHVL 245

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKM------VND---SNLFHD---QGRIEEAKELVNQMS 331
              ++ Y  K  ++++  +L+ +M       N+   S L H    QGR++ A  +  +M+
Sbjct: 246 TMLIVAY-SKWGKVEDAVELLGRMEALDMRPNEKTLSVLVHGLARQGRVDVAMNMFGKMA 304

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN------------------ 373
             G   D+  Y+ ++ G C   E+ +A K+ + M      P+                  
Sbjct: 305 SYGFSVDLAMYSVLIEGLCHGNEMGKAVKLFEDMKRDRITPDVRLLKKIIEAFCRQGDFS 364

Query: 374 TVS------------------YTAFLNGLCHNGKSLEAREMINT--------SEE----- 402
           TV                   Y   L+GL ++G+   A +++++        S++     
Sbjct: 365 TVGPFINENAVHLKPGSAVLLYNVILDGLINHGEVEAAYQLLSSMVRGDQRVSDDDTVGV 424

Query: 403 ------EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
                 E   PN+ ++++V+ GL +  KL  A  + ++MV  G     +  N LI  LC 
Sbjct: 425 HIFVITEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCN 484

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            GK+D A +   +  + G   +   + SL+ G C++ D   A  LL +M      P    
Sbjct: 485 SGKLDEAYEIFNQMKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLREMRANAHKPWIKN 544

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
            T ++  L  +GR+ EA + +  ML  G +P +VTY   ++  C+VG +E+ L L   + 
Sbjct: 545 CTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIENALGLFLDIS 604

Query: 577 SKQKCR----TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           SK  C      A+N +I      G  +EA +I+ ++L         T +++++ +   G 
Sbjct: 605 SK--CYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKSGS 662

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              A     +M +    P +     + + L   G+ +EA  L  +  E+G
Sbjct: 663 IDKAITCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIVLWCKMREKG 712



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 147/297 (49%), Gaps = 28/297 (9%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQ 203
           ++LE+ +  KL + A  +   M   G+  +P  F+Y  L+    R      A  +L  M+
Sbjct: 478 LILELCNSGKLDE-AYEIFNQMKDLGL--KPSEFTYNSLLYGICRRKDTSAAADLLREMR 534

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
             A  P +  C   +  L +  ++ +AL+FL+ M   G  P+++TY+  + G C +  I+
Sbjct: 535 ANAHKPWIKNCTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIE 594

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
           +A+ L  ++  K   PD V++  ++                       N F   G+ +EA
Sbjct: 595 NALGLFLDISSKCYLPDVVAHNILI-----------------------NGFRKAGKFDEA 631

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
           +E++ +M   G +P VVTY  +++ +C+ G +D+A   + +M      P  V+YT+ L+G
Sbjct: 632 QEIMEEMLSKGMLPSVVTYNLMIDIWCKSGSIDKAITCVYKMIDEEKPPTVVTYTSLLDG 691

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           LC+ G+  EA  +     E+  +PN I Y+ +++GL + G++  A +   EM  KGF
Sbjct: 692 LCNAGRPDEAIVLWCKMREKGCSPNGIAYTALVNGLCKCGRMETAVNYYEEMKTKGF 748



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 33/181 (18%), Positives = 79/181 (43%), Gaps = 1/181 (0%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y  D + + +++    K      A+ ++  M  +G+      ++ ++  + ++G +  A+
Sbjct: 608 YLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKSGSIDKAI 667

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             +  M      P ++   + +  L    +  +A+    +M+  G +PN + Y  L+ G 
Sbjct: 668 TCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIVLWCKMREKGCSPNGIAYTALVNGL 727

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   R++ A+   +EM  KG   D  S   +   L  + +  +  +L+ K+V   ++ H+
Sbjct: 728 CKCGRMETAVNYYEEMKTKGFDLDIFSLLNLTNLLIAQGQASKGCELL-KVVLQKDVVHN 786

Query: 317 Q 317
            
Sbjct: 787 N 787


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 229/479 (47%), Gaps = 20/479 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D I Y  ++    K    + A  VL  M+ +G+   PE  SY M   A  R+G+ + A+ 
Sbjct: 249 DAITYNSVITGCGKEGQWKEALSVLTEMSAKGLT--PETISYNMAIRACGRSGRWKEAVE 306

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL  M+   V P+++  + AI     G +   ++  L+ M   G+ PN + +N  I    
Sbjct: 307 VLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACG 366

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSN 312
              + + A++L+ E+   G +PD  S+ + +    K  R KE  +L+++M       D+ 
Sbjct: 367 KGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAI 426

Query: 313 LFHDQ-------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
            ++         G+ E A EL  QM   G  P+V++    +      G   +  ++L+QM
Sbjct: 427 SYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQM 486

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  PN ++Y + +      G+  +A +++   +E   TP++ITY+  +    + G+ 
Sbjct: 487 PAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRW 546

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA  ++REM  +G  P  +     I +  + G+ + A + +++   KG   NV+ + S+
Sbjct: 547 KEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSV 606

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I+   + G+ E+AL LL ++      PD ++Y   I A  K GR EEA +L+ +M ++GL
Sbjct: 607 IKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGL 666

Query: 546 VPTVVTYRTVIHRYCQV-GRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEA 601
            P V++Y + I R C   G  E  L LL  M +       T+Y+  IE     G  EEA
Sbjct: 667 TPDVISYTSAI-RACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEA 724



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 217/451 (48%), Gaps = 16/451 (3%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           I Y M +    ++   + A  VLR M  +G+   P+  SY   + A    G+   ++ +L
Sbjct: 286 ISYNMAIRACGRSGRWKEAVEVLRQMESQGVT--PDVISYDAAIKACGGGGQWETSVDLL 343

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    VAPN +  N+AI     G +  KA+  L  +   G+TP+  ++N  I      
Sbjct: 344 DEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKS 403

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDS 311
            R K+A++L+ EMP K   PD +SY + +    K  + +   +L  +M        V  S
Sbjct: 404 GRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISS 463

Query: 312 NLF----HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N+      ++GR +E  EL+ QM   G  P+V+TY + +    + G+ ++A  +L +M  
Sbjct: 464 NIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKE 523

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
               P++++Y + +      G+  EA  ++     +  TP+ I+Y+  +    + G+   
Sbjct: 524 LAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWER 583

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A +++R+M  KG  P  +  N +I++  R G+ + A   ++E      A +++++   I 
Sbjct: 584 AVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAIS 643

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
              ++G  EEAL LL +M      PD ++YT+ I A +  G  E+A  L+  M + G+ P
Sbjct: 644 ACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSP 703

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           T  +Y   I    + GR E+ + L+ +M  +
Sbjct: 704 TATSYSLAIEACGKGGRREEAVCLVREMAQR 734



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 214/458 (46%), Gaps = 18/458 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A  +LR MA R  E  P+  SY   + A  R G+    + +L  M    + P+ +  N+ 
Sbjct: 199 AVSLLREMADR--EVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSV 256

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I       +  +AL  L  M   G+TP  ++YN  I+      R K+A++++ +M  +G 
Sbjct: 257 ITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGV 316

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH---------DQGRIEEAKE 325
           +PD +SY   +       + +   DL+++M       N  H           G+ E+A E
Sbjct: 317 TPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVE 376

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+ +++ +G  PD  ++ + +    + G   +A ++L++M     KP+ +SY + +    
Sbjct: 377 LLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACG 436

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G+   A E+      +  TPN I+ ++ +      G+  E  +++R+M  +G  P  +
Sbjct: 437 KGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVI 496

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N  I++  + G+ + A   + +        + + + S I    ++G  +EA++LL +M
Sbjct: 497 TYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREM 556

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 PD ++YT  IDA  KNG+ E A EL+ +M +KGL P V+TY +VI    + G  
Sbjct: 557 PGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEW 616

Query: 566 EDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEA 601
           E  L LL+++          +YN  I      G  EEA
Sbjct: 617 EKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEA 654



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 211/470 (44%), Gaps = 35/470 (7%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLIC----NTAIHVLVVGNKLAKALRFLERM-QLAGITP 244
           GK R A+ +L  M++  V     +C     TAI       +  KAL  L  + +  G++P
Sbjct: 124 GKWREALGILDEMKEGGV-----VCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSP 178

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           NV  YN  I+      + + A+ L+ EM  +   PD++SY + +                
Sbjct: 179 NVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAI---------------- 222

Query: 305 EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                        G+ E    L+ +M  +G  PD +TY +V+ G  + G+  +A  +L +
Sbjct: 223 -------KACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTE 275

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G  P T+SY   +     +G+  EA E++   E +  TP+ I+Y   +      G+
Sbjct: 276 MSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQ 335

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
              + D++ EM  +G  P  +  N  I +  + G+ + A + ++E    G   +  +F S
Sbjct: 336 WETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNS 395

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
            I    + G  +EAL LL +M   +  PD ++Y + I+A  K G+ E A EL  +M +KG
Sbjct: 396 AIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKG 455

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAG 602
           L P V++    I    + GR ++ L+LL +M ++        YN  I+     G  E+A 
Sbjct: 456 LTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKAL 515

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
            +L K+   A   D+ T +  + +   +G    A  +   M  + L PD+
Sbjct: 516 DLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDV 565



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 195/398 (48%), Gaps = 47/398 (11%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +LR +   G+     +F+  + A +++G+ + A+ +L  M    + P+ +  N+AI 
Sbjct: 374 AVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIE 433

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
               G +   AL    +M   G+TPNV++ N  I+   +  R ++ ++L+ +MP +G +P
Sbjct: 434 ACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTP 493

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD-------QGRIEEAKELV 327
           + ++Y + +    K  + ++  DL+ KM       DS  ++        +GR +EA  L+
Sbjct: 494 NVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALL 553

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M   G  PDV++YTA ++ + + G+ ++A ++L+QM   G  PN ++Y + +      
Sbjct: 554 REMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRG 613

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
           G+  +A +++   +E    P+ ++Y++ +    + G+  EA D++REM  +G  P     
Sbjct: 614 GEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTP----- 668

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
                                         +V+++TS IR    +G+ E+AL LL+ M  
Sbjct: 669 ------------------------------DVISYTSAIRACNAEGEWEKALGLLNLMGA 698

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
               P   +Y+  I+A  K GR EEA  L+ +M  +GL
Sbjct: 699 HGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGL 736



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 154/339 (45%), Gaps = 23/339 (6%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R + D I Y   +E   K    + A  + R M  +G+     + +  + A    G+ +  
Sbjct: 420 RLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEG 479

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + +L  M    + PN++  N+AI     G +  KAL  L +M+   +TP+ +TYN  I  
Sbjct: 480 LELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAA 539

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
                R K+A+ L+ EMP +G +PD +SY   +                       + + 
Sbjct: 540 CSKRGRWKEAVALLREMPGQGLTPDVISYTAAI-----------------------DAYG 576

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G+ E A EL+ QM   G  P+V+TY +V+    R GE ++A  +L+++      P+ +
Sbjct: 577 KNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLM 636

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           SY   ++     G+  EA +++     E  TP+ I+Y+  +     EG+  +A  ++  M
Sbjct: 637 SYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLM 696

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
              G  PT    +L I++  + G+ + A   ++E   +G
Sbjct: 697 GAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRG 735


>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
          Length = 665

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 207/419 (49%), Gaps = 12/419 (2%)

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           +G    P  +S  + A  ++ ++     +L+ M K    P+   CN  +H L   N+L  
Sbjct: 224 KGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYD 283

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           AL+ +E+M + G  P+V+TY  ++   CD  R  +A+ L +EM  +G  PD V+   ++ 
Sbjct: 284 ALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIF 343

Query: 290 YLCKEKRIKEVRDLMEKMVN-DSNL-----------FHDQGRIEEAKELVNQMSQMGCIP 337
            LCK +++ E  +L  +M+  D  L           F   G IE+A + V+ M + GC P
Sbjct: 344 GLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEP 403

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           DVVTY  ++N +C +G  D+A+ ++++M   G  P+  SY   L GLC   +  +A   +
Sbjct: 404 DVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFV 463

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +   E     + ++ ++++    R  K++ A ++ +EM  KG     V   +LI  L   
Sbjct: 464 SDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGI 523

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G  + A++   + LN     NV  +  ++   C+ G  + A  +   M   +  PDTVT+
Sbjct: 524 GYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTF 583

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
            T+I  L K+ R  EA +L  +M +KG+ P  +T+R +I      G+     ++ E M+
Sbjct: 584 NTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMM 642



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/587 (24%), Positives = 257/587 (43%), Gaps = 18/587 (3%)

Query: 91  WSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEI 150
           WS  +E EL  L   L P  +  VLR   D  +A++F++WA+ +  + H+      ++ +
Sbjct: 75  WSESVELELEGLHVELDPFVVNKVLRGLLDSGMAVRFYWWAESRPGFYHNNFAIAYIISL 134

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           L            L  +  +G+      +  L+  Y+RAGK  + +     M  +     
Sbjct: 135 LFVDDNFALLSEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREF 194

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
            +  N  I V++         ++       G      TY+  I   C  +RI+   +L+ 
Sbjct: 195 GVDYNRFIGVMIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLT 254

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQG 318
           +M   GC PD  +    + YLC   R+ +   ++EKM                +   D  
Sbjct: 255 DMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHR 314

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           R  EA  L  +M + G  PDVV   A++ G C+  ++D+A ++  +M     + N   Y 
Sbjct: 315 RFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYN 374

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           A ++G    G   +A + ++  +     P+ +TY+++++     G   +A +++R+M   
Sbjct: 375 ALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMS 434

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P     N+L++ LC+  ++D A  F+ + +  G   ++V+   LI  FC+   +  A
Sbjct: 435 GVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSA 494

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L+L  +M       D VTY  +I+ L   G    A EL  +ML+  +VP V  Y  ++H 
Sbjct: 495 LNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHN 554

Query: 559 YCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            C+VG  +   K+  +M  K+       +N +I  L       EA  +  ++     + D
Sbjct: 555 LCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPD 614

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
             T   ++   L++G   LAY++   M    +I D    + VSERLI
Sbjct: 615 NLTFRYIISGLLDEGKATLAYEIWEYMMENGIILD----RDVSERLI 657



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/473 (22%), Positives = 204/473 (43%), Gaps = 26/473 (5%)

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I +L V +  A    FL R++  G+  +   Y  L+ GY    +    I+  DEM   GC
Sbjct: 132 ISLLFVDDNFALLSEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGC 191

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
               V Y   +G + K        DL+EK  N +                  +++  C+ 
Sbjct: 192 REFGVDYNRFIGVMIKNCCF----DLVEKYYNMA------------------LAKGFCLT 229

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
              TY+  +   C+   ++  +++L  M   GC P+  +   +++ LC + +  +A +M+
Sbjct: 230 PF-TYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMV 288

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
                +   P+ +TY+ V+  L    + SEA  +  EMV++G  P  V    LI  LC+ 
Sbjct: 289 EKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKN 348

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
            K+D A +     L     +NV  + +LI GF + G +E+A   +  M     +PD VTY
Sbjct: 349 QKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTY 408

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL-EKML 576
             +++     G  ++A  L+ KM   G+ P   +Y  ++   C+  +++     + + M 
Sbjct: 409 NILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHME 468

Query: 577 SKQKCR-TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
               C   + N +I+  C    +  A  +  ++     +ADA T  +L+      G   L
Sbjct: 469 VGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNL 528

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           A ++  +M N  ++P++ +   +   L   G  + A  +  +  ++  + P +
Sbjct: 529 AEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQK-EVSPDT 580


>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
          Length = 665

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 207/419 (49%), Gaps = 12/419 (2%)

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           +G    P  +S  + A  ++ ++     +L+ M K    P+   CN  +H L   N+L  
Sbjct: 224 KGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYD 283

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           AL+ +E+M + G  P+V+TY  ++   CD  R  +A+ L +EM  +G  PD V+   ++ 
Sbjct: 284 ALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIF 343

Query: 290 YLCKEKRIKEVRDLMEKMVN-DSNL-----------FHDQGRIEEAKELVNQMSQMGCIP 337
            LCK +++ E  +L  +M+  D  L           F   G IE+A + V+ M + GC P
Sbjct: 344 GLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEP 403

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           DVVTY  ++N +C +G  D+A+ ++++M   G  P+  SY   L GLC   +  +A   +
Sbjct: 404 DVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFV 463

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +   E     + ++ ++++    R  K++ A ++ +EM  KG     V   +LI  L   
Sbjct: 464 SDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGI 523

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G  + A++   + LN     NV  +  ++   C+ G  + A  +   M   +  PDTVT+
Sbjct: 524 GYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTF 583

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
            T+I  L K+ R  EA +L  +M +KG+ P  +T+R +I      G+     ++ E M+
Sbjct: 584 NTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMM 642



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 145/590 (24%), Positives = 262/590 (44%), Gaps = 24/590 (4%)

Query: 91  WSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEI 150
           WS  +E EL  L   L P  +  VLR  +D  +A++F++WA+ +  + H+    + +  I
Sbjct: 75  WSESVELELEGLHVELDPFVVNKVLRGLSDSGMAVRFYWWAESRPGFYHNN---FAIAYI 131

Query: 151 LSKTKLCQGAKRVLRLMAR---RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV 207
           +S   +      +L  + R   +G+      +  L+  Y+RAGK  + +     M  +  
Sbjct: 132 ISLLFVDDNFALLLEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGC 191

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
               +  N  I V++         ++       G      TY+  I   C  +RI+   +
Sbjct: 192 REFGVDYNRFIGVMIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEE 251

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFH 315
           L+ +M   GC PD  +    + YLC   R+ +   ++EKM                +   
Sbjct: 252 LLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLC 311

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
           D  R  EA  L  +M + G  PDVV   A++ G C+  ++D+A ++  +M     + N  
Sbjct: 312 DHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVS 371

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
            Y A ++G    G   +A + ++  +     P+ +TY+++++     G   +A +++R+M
Sbjct: 372 IYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKM 431

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              G  P     N+L++ LC+  ++D A  F+ + +  G   ++V+   LI  FC+   +
Sbjct: 432 EMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKV 491

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
             AL+L  +M       D VTY  +I+ L   G    A EL  +ML+  +VP V  Y  +
Sbjct: 492 NSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIM 551

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +H  C+VG  +   K+  +M  K+       +N +I  L       EA  +  ++     
Sbjct: 552 LHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGV 611

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           + D  T   ++   L++G   LAY++   M    +I D    + VSERLI
Sbjct: 612 EPDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILD----RDVSERLI 657



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 108/473 (22%), Positives = 205/473 (43%), Gaps = 26/473 (5%)

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I +L V +  A  L FL R++  G+  +   Y  L+ GY    +    I+  DEM   GC
Sbjct: 132 ISLLFVDDNFALLLEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGC 191

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
               V Y   +G + K        DL+EK  N +                  +++  C+ 
Sbjct: 192 REFGVDYNRFIGVMIKNCCF----DLVEKYYNMA------------------LAKGFCLT 229

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
              TY+  +   C+   ++  +++L  M   GC P+  +   +++ LC + +  +A +M+
Sbjct: 230 PF-TYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMV 288

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
                +   P+ +TY+ V+  L    + SEA  +  EMV++G  P  V    LI  LC+ 
Sbjct: 289 EKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKN 348

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
            K+D A +     L     +NV  + +LI GF + G +E+A   +  M     +PD VTY
Sbjct: 349 QKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTY 408

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL-EKML 576
             +++     G  ++A  L+ KM   G+ P   +Y  ++   C+  +++     + + M 
Sbjct: 409 NILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHME 468

Query: 577 SKQKCR-TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
               C   + N +I+  C    +  A  +  ++     +ADA T  +L+      G   L
Sbjct: 469 VGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNL 528

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           A ++  +M N  ++P++ +   +   L   G  + A  +  +  ++  + P +
Sbjct: 529 AEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQK-EVSPDT 580


>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
 gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 253/529 (47%), Gaps = 66/529 (12%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADR-QWRYRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           L P ++ A++R Q +  +ALQ F++A +    + H+   Y+ ++  LS+ +  +  + +L
Sbjct: 50  LFPNRLVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLL 109

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
             +   GI C  + F  ++ +Y  A + + A+     +Q   V  ++   NT ++ LV  
Sbjct: 110 LELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQN 169

Query: 225 NKLAKA-LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
           N+ +   L F       G+ PNV T N LIK                             
Sbjct: 170 NRFSSVHLLFKYSKSKFGVVPNVFTCNILIKA---------------------------- 201

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
                  LCK+              ND         +E A+++ ++M  MG +P+VVTYT
Sbjct: 202 -------LCKK--------------ND---------VEGARKVFDEMPSMGIVPNVVTYT 231

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            ++ G+   G++  AK++  +++ HG  P+  +YT  ++G    G+  +A ++++  EE 
Sbjct: 232 TILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEEN 291

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              PN ITY V++ G  +E K  EA +++ +M++K + P       +I  LC EG++  A
Sbjct: 292 GVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEA 351

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            K  ++ L K C  +    ++LI   C++G++ EA  L ++ +        +TY T+I  
Sbjct: 352 CKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNE-FERGTISSLLTYNTLIAG 410

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC-- 581
           + + G + EA  L   ML KG VP   TY  +I  + +VG+ ++++K++E+ML K  C  
Sbjct: 411 MCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDK-GCLL 469

Query: 582 -RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
             + Y  ++E L   G  EE   IL  ++ + +  D    ++ V  +++
Sbjct: 470 NESTYLILVEGLLKLGKREELLNILSMIISSGA-VDFKAWNLFVPHFVS 517



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 140/321 (43%), Gaps = 1/321 (0%)

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G  PN  +    +  LC       AR++ +        PN +TY+ ++ G    G +  A
Sbjct: 187 GVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGA 246

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             V  E+   G+ P      +L+    ++G+   A K M E    G   N + +  +I G
Sbjct: 247 KRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILG 306

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +C++    EAL+LL+DM   K  P++     +ID L   GRV+EA ++  K+L K   P 
Sbjct: 307 YCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPD 366

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM-LSKQKCRTAYNQVIENLCSFGYLEEAGKILGK 607
                T+IH  C+ G + +  KL  +           YN +I  +C  G L EA ++   
Sbjct: 367 NAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELCEAARLWDD 426

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +L      +  T ++L++ +L  G      KV   M ++  + +      + E L+  GK
Sbjct: 427 MLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGK 486

Query: 668 SEEADTLMLRFVERGHIQPKS 688
            EE   ++   +  G +  K+
Sbjct: 487 REELLNILSMIISSGAVDFKA 507


>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 215/478 (44%), Gaps = 67/478 (14%)

Query: 104 RSLKPRQICAVLRSQADERVALQFFYWADRQWR--YRHDPIVYYMMLEILSKTKLCQGAK 161
           + +   Q+  +++++ D + A+  F  A  ++   +RH    + +M+  L      + A+
Sbjct: 11  KQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAE 70

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
            +L  M         + F  +  AY R  K  +A+ V   M++    P+     T   +L
Sbjct: 71  ELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAIL 130

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA-IKLIDEMPLKGCSPD 280
           V  N+L  ALRF   M+  GI P+V + N LIK  C      DA +++  EMP +GC P 
Sbjct: 131 VGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPH 190

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
             +Y T++  LC+                        G+I EAKEL  +M    C P VV
Sbjct: 191 SYTYGTLIXGLCR-----------------------LGKIGEAKELFKEMETKACSPTVV 227

Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
           TY ++++G C+  +LD A ++L++M   G KPN  +Y++ ++G C +G S  A E+++  
Sbjct: 228 TYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMM 287

Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
                 PN ITYS ++HGL +EGKL EA +++  M  +G  P       +I   C   K 
Sbjct: 288 VSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKF 347

Query: 461 DGAKKFMQECL-----------------------------------------NKGCAVNV 479
             A  F+ E +                                          +G +++ 
Sbjct: 348 HEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDA 407

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
             F SL+  FC KGDL +A  L+D+M L    PD  T+  ++ A     +V E+ EL+
Sbjct: 408 KTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAELV 465



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 163/351 (46%), Gaps = 22/351 (6%)

Query: 318 GRIE---EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
           GR+    +A  +  +M +  C P   +Y  V        +L  A +  + M   G  P+ 
Sbjct: 96  GRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSV 155

Query: 375 VSYTAFLNGLCHNGKSLEA-----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            S    +  LC N  +++A     REM N        P++ TY  ++ GL R GK+ EA 
Sbjct: 156 ASLNVLIKALCKNSGTMDAALRIFREMPNRG----CPPHSYTYGTLIXGLCRLGKIGEAK 211

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           ++ +EM  K   PT V    LI  LC+   +D A + ++E  +KG   NV  ++SL+ G 
Sbjct: 212 ELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGH 271

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ G    AL LLD M   +  P+ +TY+T++  L K G+++EA E++ +M  +GL P  
Sbjct: 272 CKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDA 331

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKM----LSKQKCRTA-----YNQVIENLCSFGYLEE 600
             Y  +I  +C + +  +    L++M    +S  +   +     +N V++ LC+  +   
Sbjct: 332 GLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCT-EHPNR 390

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           A ++   +       DA T   LV  + NKG    A  +   M     IPD
Sbjct: 391 AFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPD 441



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 3/174 (1%)

Query: 512 PDTVTYTTIIDALSKN-GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
           P   +   +I AL KN G ++ A  +  +M ++G  P   TY T+I   C++G++ +  +
Sbjct: 153 PSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKE 212

Query: 571 LLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
           L ++M +K    T   Y  +I  LC    L+ A ++L ++     K +  T   L++ + 
Sbjct: 213 LFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHC 272

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             G    A ++   M +R  +P++     +   L  EGK +EA  ++ R   +G
Sbjct: 273 KSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQG 326


>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 205/443 (46%), Gaps = 44/443 (9%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            +S L+  Y    K+  A+ ++  ++   + P++ +CN+ +  L+  ++L  A   LE M
Sbjct: 186 VYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGM 245

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           Q  G+  N    +  I+ YC    I+   K++ EM   G   D ++Y  V+  LCK   +
Sbjct: 246 QSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCV 305

Query: 298 KEVRDLMEKM----------------------------VNDSNLFH-------------- 315
           K    L+ KM                            +N  N F+              
Sbjct: 306 KVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVRPNIFVYSSFMTK 365

Query: 316 --DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
               G + EA +   +MS+ G  PD   YT ++ G+C+VG++++A + L +M   G  P+
Sbjct: 366 LCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPS 425

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             +YT  +N  C +G    A  ++     E   P+ +T++ ++ G  ++G L +A +++ 
Sbjct: 426 VTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLD 485

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            M   G  P  V  N LI SL   G  + AK  + E + +G + +V+ FT +I GF +KG
Sbjct: 486 IMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKG 545

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           + EEA  +   M      PD VT + +++   +  R++EA  L +KML  GL P +V Y 
Sbjct: 546 NFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYN 605

Query: 554 TVIHRYCQVGRVEDLLKLLEKML 576
            +IH +C  G +     L+  M+
Sbjct: 606 NLIHGFCSAGNMNAACNLVAMMI 628



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 206/460 (44%), Gaps = 22/460 (4%)

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            Y+ L+  Y    ++  A+ LI E+ L    P      +++  L +  ++    D++E M
Sbjct: 186 VYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGM 245

Query: 308 ------VNDSNL------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                 +N S L      +  +G I+   +++ +M   G   DV+ YT V++  C++  +
Sbjct: 246 QSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCV 305

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
             A  +L +M H G   ++VS ++ ++G C  G+S +A  ++N        PN   YS  
Sbjct: 306 KVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVR---PNIFVYSSF 362

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           M  L ++G + EA    +EM + G +P      ++I   C+ G ++ A +++ E L  G 
Sbjct: 363 MTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGI 422

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             +V  +T LI   C+ GD+  A  LL  M L    PD VT+  +ID   K G +++A E
Sbjct: 423 TPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFE 482

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVG---RVEDLL-KLLEKMLSKQKCRTAYNQVIEN 591
           L+  M S G+ P  VTY  +IH     G     +D+L +L+ + LS       +  VI+ 
Sbjct: 483 LLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPD--VMTFTDVIDG 540

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
               G  EEA  +   +     K D  TC  L+  Y        A  +  +M +  L PD
Sbjct: 541 FSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPD 600

Query: 652 LKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
           L L   +       G    A  L+   ++ G + P    H
Sbjct: 601 LVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFL-PNITTH 639



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 101/436 (23%), Positives = 194/436 (44%), Gaps = 27/436 (6%)

Query: 75  HPLVREVCRLIELRSAWSPKLEG------ELRNLLRSLKPRQICAVLRSQADERVALQFF 128
           + L++ + R  +L  AW   LEG       L   + SL     CA    Q+  ++ ++  
Sbjct: 223 NSLLKALLRSHQLDLAWDI-LEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEM- 280

Query: 129 YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR 188
               + +  + D I Y ++++ L K    + A  +L  M   GI     + S ++  Y +
Sbjct: 281 ----KNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCK 336

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
            G+   A+ +L+      V PN+ + ++ +  L     + +A +  + M   G+ P+   
Sbjct: 337 KGRSDKAINLLNFFN---VRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFC 393

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           Y  +I GYC +  I  A + + EM   G +P   +Y  ++   CK   +     L+++M+
Sbjct: 394 YTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMM 453

Query: 309 NDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
            +  +            F  +G +++A EL++ M   G  PD VTY A+++     G  +
Sbjct: 454 LEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPN 513

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +AK +L ++   G  P+ +++T  ++G    G   EA  + +   E    P+ +T S ++
Sbjct: 514 EAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALL 573

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
           +G  R  ++ EA  +  +M+  G  P  V  N LI   C  G M+ A   +   ++ G  
Sbjct: 574 NGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFL 633

Query: 477 VNVVNFTSLIRGFCQK 492
            N+    +   GF +K
Sbjct: 634 PNITTHRAFALGFEKK 649


>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
 gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
          Length = 484

 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 226/492 (45%), Gaps = 55/492 (11%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR 165
           L+PR + +V+R      +A +FF W+ +Q  YRHD   Y  +L  L + +  + A R  +
Sbjct: 9   LEPRLVGSVIRRVPSLALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFK 68

Query: 166 --LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
             L A     CRP  +S+ ++                             CN        
Sbjct: 69  RELCA----HCRPSLYSFTIIIQC-------------------------FCNV------- 92

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
                +A R+L  M+  GI P+V  YN ++KGYCDL R+  A+    +M  K C P+  +
Sbjct: 93  -RNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMG-KTCKPNVAT 150

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFH---DQGRIEEAKELVNQMS 331
           Y TV+  LCK  +I     L  ++ +D         S L H      R+E A ++ + M 
Sbjct: 151 YNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMML 210

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC-HNGKS 390
           +     D   Y A+ +GFC+   +D+A ++L+ M   GCKP+ V+Y   +NG+C +  + 
Sbjct: 211 EANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRI 270

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA  +          PNA+TY  ++ GL +  ++    ++ + M K G  P     + L
Sbjct: 271 EEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSL 330

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC--QKGDLEEALSLLDDMYLC 508
           I +  +  K+D AK  +Q+        +V  +T+LI G+C  +K  ++EAL L  +M   
Sbjct: 331 IYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDR 390

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
           +  P+ +TY  ++  L K GR +EA ++  +M      P  +T++ +       G+ +  
Sbjct: 391 RVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKF 450

Query: 569 LKLLEKMLSKQK 580
            ++   M+ K +
Sbjct: 451 ERIFMDMVYKGR 462



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 198/474 (41%), Gaps = 33/474 (6%)

Query: 227 LAKALRFLE-RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           LA A +F +   +  G   +V  Y  L+       R ++A++         C P   S+ 
Sbjct: 24  LALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFT 83

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            ++   C  +                    + GR   A   +  M  +G  PDV  Y  V
Sbjct: 84  IIIQCFCNVR--------------------NPGR---AWRYLGYMRSLGIPPDVTAYNVV 120

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           + G+C +G + +A     +M    CKPN  +Y   +NGLC  GK   A  +      +  
Sbjct: 121 LKGYCDLGRVGRALIKFGKM-GKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLV 179

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            P+  TYS ++HGL +  +L  A  V   M++  +       N +    C+E ++D A +
Sbjct: 180 DPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALE 239

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQ-KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
            ++  + +GC  +VV +  +I G CQ K  +EEA  L   M      P+ VTY T+I  L
Sbjct: 240 VLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGL 299

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA 584
           SK   V+   EL   M   GL P    Y ++I+ + +V ++++   +L+           
Sbjct: 300 SKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDV 359

Query: 585 --YNQVIENLCSF--GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
             Y  +I   C      ++EA  +   +       +  T ++++      G    AY++ 
Sbjct: 360 YMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIF 419

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ---PKSEEH 691
             MF     P+    K ++  +I  GK+++ + + +  V +G  Q   P  E+H
Sbjct: 420 QEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDMVYKGRWQGEGPILEQH 473


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 243/525 (46%), Gaps = 59/525 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y +M++ L K K    A  +L+ M  RG    P+  +Y  L+  +    K+  A++
Sbjct: 293 DVYTYNIMIDKLCKMKRSTHAYLLLKRM--RGDNLAPDECTYNTLIKGFFDESKMMLAIH 350

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           + + M +  + P+L    T I        + +ALR L  MQ+AG+ P+ +TY+ ++ G  
Sbjct: 351 IFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNG-- 408

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH-- 315
               + +A  + D M   GCSPD  +Y  ++  LCK   + + ++ M  +V+  +     
Sbjct: 409 ---SVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQK 465

Query: 316 ----------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                     + G ++EA +L  +M  +  IPD+ TYT +++GFCR G++  A  +LQ M
Sbjct: 466 TLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMM 525

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGK-----------------------------------S 390
              G  P+ V+YT  L GL   G+                                    
Sbjct: 526 LEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGK 585

Query: 391 LEAREM-INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
           L   EM I    +    PN  +Y+++MHG  ++G LS +  + ++MV+KG  PT V   L
Sbjct: 586 LHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRL 645

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI  L + G ++ A KF+ + + +G   + ++F  LI  F +K  + +AL L + M    
Sbjct: 646 LILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLY 705

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P + TY+ +I+ L +   ++ + +++  M+  GL P    Y  +I+  C+ G +    
Sbjct: 706 MSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAF 765

Query: 570 KLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +L E+M  L       A + ++  L   G +EE   +   ++R  
Sbjct: 766 RLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAG 810



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 213/429 (49%), Gaps = 13/429 (3%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICN 215
           +GAK ++  M    +   P   +Y  ++  Y + G+ + AM VL  M+K  V  ++   N
Sbjct: 242 KGAKHMIHKMKSCSL---PNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYN 298

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
             I  L    +   A   L+RM+   + P+  TYN LIKG+ D  ++  AI + +EM  +
Sbjct: 299 IMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQ 358

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFHD---QGRIEEAKELVN 328
           G  P   +Y T++   C+   I E   ++ +M    V  S + +     G + EA  + +
Sbjct: 359 GLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNGSVHEAFSVYD 418

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            M + GC PDV TY  ++ G C+ G L QAK+ +  + H     +  +  A L G+C++G
Sbjct: 419 NMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHG 478

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              EA ++        + P+  TY++++ G  R+GK+  A  +++ M++KG  P  V   
Sbjct: 479 SLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYT 538

Query: 449 LLIQSLCREGKMDGAKKFMQECLNK-GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
            L++ L +EG++  A    QE + K G   + + + S++ G+ + G L +    + DM  
Sbjct: 539 CLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQ 598

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
            K  P+  +Y  ++    K G +  +  L   M+ KG+ PT VTYR +I    + G +E 
Sbjct: 599 NKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEI 658

Query: 568 LLKLLEKML 576
            +K L+KM+
Sbjct: 659 AVKFLDKMV 667



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 138/579 (23%), Positives = 256/579 (44%), Gaps = 80/579 (13%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIEC----------------RPEAFSYLMVAY 186
           +Y M  +IL++ K+   A  +L+ +A  G  C                 P  F  L+ AY
Sbjct: 106 IYCMAAQILTQAKMHSQAMSLLKHLAMTGFSCSAVFSSLLCTISRCDSNPLVFDLLVNAY 165

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV------------------------ 222
            +  ++ +A   +  M       +   CN  ++ LV                        
Sbjct: 166 VKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEGLVRKFPLDV 225

Query: 223 -----------VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
                      +   L  A   + +M+   + PNV+TYN ++  Y    R K A+ ++++
Sbjct: 226 TTCNIVLNSMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTILHWYVKKGRFKAAMCVLED 284

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-------------FHDQG 318
           M   G   D  +Y  ++  LCK KR      L+++M  D NL             F D+ 
Sbjct: 285 MEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGD-NLAPDECTYNTLIKGFFDES 343

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           ++  A  + N+M + G  P + TYT +++G+CR G +D+A ++L +M   G KP+ V+Y+
Sbjct: 344 KMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYS 403

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           A LNG  H     EA  + +  E+   +P+  TY  ++ GL + G L +A + +  +V  
Sbjct: 404 AMLNGSVH-----EAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVH- 457

Query: 439 GFFPTPVE---INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              P+ ++   +N L+  +C  G +D A    ++ +      ++  +T L+ GFC+KG +
Sbjct: 458 --IPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKI 515

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK-GLVPTVVTYRT 554
             A+ LL  M      PD VTYT ++  L K G+V+ A+ L  +++ K G+    + Y +
Sbjct: 516 VPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNS 575

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +++ Y + G++  +   +  M   +      +YN ++      G+L  +  +   ++R  
Sbjct: 576 MMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKG 635

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            K    T  +L+      G+  +A K   +M    + PD
Sbjct: 636 IKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPD 674



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 218/495 (44%), Gaps = 68/495 (13%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMM--------QKAAVAPNLLICNTAIHVLVV 223
           C P+ ++Y  L+    + G L  A   +S +        QK   A  L ICN        
Sbjct: 425 CSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHG------ 478

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
              L +AL   E+M      P++ TY  L+ G+C   +I  A+ L+  M  KG  PD V+
Sbjct: 479 --SLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVT 536

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQM 330
           Y  ++  L KE ++K    L ++++    ++ D              G++ + +  +  M
Sbjct: 537 YTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDM 596

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG-- 388
           +Q    P+  +Y  +++G  + G L ++  + + M   G KP  V+Y   + GL  +G  
Sbjct: 597 NQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMI 656

Query: 389 ---------------------------------KSLEAREMINTSEEEWWTPNAITYSVV 415
                                            +  +A ++ N  +  + +P++ TYS +
Sbjct: 657 EIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAM 716

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           ++GL R+  L  +CDV+R+MV+ G  P       LI + CR G ++GA +  +E    G 
Sbjct: 717 INGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGI 776

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
               V  +S++RG  + G +EE + +   +      P   T+TT++  L K  ++ +A  
Sbjct: 777 VPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALH 836

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
           L   M S GL   VVTY  +I   C++  V D L+L E+M SK  +   T Y  + E + 
Sbjct: 837 LKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIY 896

Query: 594 SFGYLEEAGKILGKV 608
             G   E  K+L  +
Sbjct: 897 GTGRTLEGEKLLNDI 911



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 188/413 (45%), Gaps = 30/413 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLR-LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           D + Y  +L+ L K    + A  + + ++ + G+     A++ +M  Y +AGKL      
Sbjct: 533 DIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMT 592

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +  M +  V PN    N  +H  +    L++++   + M   GI P  +TY  LI G   
Sbjct: 593 IYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSK 652

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
              I+ A+K +D+M L+G  PD++S+  ++                       N F ++ 
Sbjct: 653 HGMIEIAVKFLDKMVLEGIYPDRLSFDVLI-----------------------NAFSEKS 689

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           R+ +A +L N M  +   P   TY+A++NG  R   L  +  +L+ M   G +P    Y 
Sbjct: 690 RMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYI 749

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           A +N  C  G    A  +          P  +  S ++ GL + GK+ E   V   +++ 
Sbjct: 750 ALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRA 809

Query: 439 GFFPTPVEINLLIQSLCREGKMDGA---KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           G  PT      L+  LC+E K+  A   K  M+ C   G  ++VV +  LI G C+   +
Sbjct: 810 GMVPTIATFTTLMHGLCKEAKISDALHLKSLMESC---GLKIDVVTYNVLITGLCKIQCV 866

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            +AL L ++M      P+  TYTT+ +A+   GR  E  +L+  +  +GLVP+
Sbjct: 867 SDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPS 919



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 158/341 (46%), Gaps = 12/341 (3%)

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK-PNTVSYTAFLNGLCHNGKSLEAREM 396
           DV T   V+N  C  G L  AK M+ +M    C  PN ++Y   L+     G+   A  +
Sbjct: 224 DVTTCNIVLNSMCIEGNLKGAKHMIHKM--KSCSLPNVITYNTILHWYVKKGRFKAAMCV 281

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +   E+     +  TY++++  L +  + + A  +++ M      P     N LI+    
Sbjct: 282 LEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFD 341

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           E KM  A     E L +G   ++  +T+LI G+C+ G ++EAL +L +M +    P  VT
Sbjct: 342 ESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVT 401

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV---EDLLKLLE 573
           Y+ ++     NG V EA  +   M   G  P V TYR ++   C+ G +   ++ +  + 
Sbjct: 402 YSAML-----NGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIV 456

Query: 574 KMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
            + S    +T  N ++  +C+ G L+EA  +  K++      D  T  +L+  +  KG  
Sbjct: 457 HIPSAIDQKT-LNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKI 515

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
           + A  +   M  + L+PD+     + + LI EG+ + A  L
Sbjct: 516 VPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYL 556



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/374 (23%), Positives = 160/374 (42%), Gaps = 10/374 (2%)

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           N +  + R+ +A   +  M   G         AV+N    +GE       L++       
Sbjct: 163 NAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEGLVRKFP 222

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
            +  +    LN +C  G    A+ MI+   +    PN ITY+ ++H   ++G+   A  V
Sbjct: 223 LDVTTCNIVLNSMCIEGNLKGAKHMIH-KMKSCSLPNVITYNTILHWYVKKGRFKAAMCV 281

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           + +M K G        N++I  LC+  +   A   ++       A +   + +LI+GF  
Sbjct: 282 LEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFD 341

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           +  +  A+ + ++M      P   TYTT+ID   +NG ++EA  ++ +M   G+ P+ VT
Sbjct: 342 ESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVT 401

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKV 608
           Y  +++     G V +   + + M  K  C      Y  ++  LC  G+L +A + +  +
Sbjct: 402 YSAMLN-----GSVHEAFSVYDNM-EKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCI 455

Query: 609 LRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
           +   S  D  T + L+    N G    A  +  +M   N IPD+     +      +GK 
Sbjct: 456 VHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKI 515

Query: 669 EEADTLMLRFVERG 682
             A  L+   +E+G
Sbjct: 516 VPAVILLQMMLEKG 529


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 243/511 (47%), Gaps = 22/511 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y ++ ++Y+++     K+   + A  V + MA  G+      +S LM+A+ +       +
Sbjct: 172 YTYNGLIYFLV-----KSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVV 226

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M+   V PN+      I VL    +L +A R L +M+  G  P+V+T   LI+  
Sbjct: 227 GLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQIL 286

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM---GYLCKEKRIKEVRDLMEKMVNDSNL 313
           CD  R+ DA  +  +M      PD+V+Y T++   G     + + E+ + ++    + N+
Sbjct: 287 CDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNV 346

Query: 314 FH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                        GR++EA ++ ++M Q G IP   +Y ++++GF +    ++A ++   
Sbjct: 347 VSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNH 406

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M  HG  PN  ++  F+N    +G+SL+A +     + +   P+ +  + V++GL + G+
Sbjct: 407 MNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGR 466

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           L  A  V  E+   G  P  +   ++I+   +    D A K   E +   CA +V+   S
Sbjct: 467 LGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNS 526

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI    + G   EA  +  ++     +P   TY T++  L + G+V+E  +L+  M S  
Sbjct: 527 LIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNS 586

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEA 601
             P ++TY TV+   C+ G V   L +L  M +   C    ++YN V+  L     L+EA
Sbjct: 587 FPPNIITYNTVLDCLCKNGEVNYALDMLYSM-TMNGCMPDLSSYNTVMYGLVKEDRLDEA 645

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGI 632
             +  ++ +  +   A+ C +L  S++  G+
Sbjct: 646 FWMFCQMKKVLAPDYATVCTIL-PSFVRSGL 675



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 247/586 (42%), Gaps = 60/586 (10%)

Query: 112  CAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRG 171
            C    S ADE  A++ F       R   D +    ++++L K      A ++   +    
Sbjct: 495  CCSKASNADE--AMKIFAEMIEN-RCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMN 551

Query: 172  IECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
            +E     ++ L+    R GK++  M +L  M   +  PN++  NT +  L    ++  AL
Sbjct: 552  LEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYAL 611

Query: 232  RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
              L  M + G  P++ +YN ++ G     R+ +A  +  +M  K  +PD  +  T++   
Sbjct: 612  DMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMK-KVLAPDYATVCTILPSF 670

Query: 292  CKEKRIKE--------------------VRDLMEKM---------------VNDSNLFHD 316
             +   +KE                    V  LME +               +  S L  D
Sbjct: 671  VRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLD 730

Query: 317  QGRIEE-------------AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
               +               A ELV +   +G      +Y A++ G      +D A+++  
Sbjct: 731  DLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFS 790

Query: 364  QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE---EWWTPNAITYSVVMHGLR 420
            +M   GC P+  +Y   L+ +   GKS+   +M+   EE   + +    +TY+ ++ GL 
Sbjct: 791  EMKRLGCDPDEFTYHLILDAM---GKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLV 847

Query: 421  REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
            +   L EA ++  +++ +GF PTP     L+  L ++G ++ A+    E L  GC  N  
Sbjct: 848  KSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCA 907

Query: 481  NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
             +  L+ G+   GD E+   L + M     +PD  +YT +ID L  +GR+ +      ++
Sbjct: 908  IYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQL 967

Query: 541  LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYL 598
               GL P ++TY  +IH   + GR+E+ L L   M  K        YN +I  L   G  
Sbjct: 968  TDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKA 1027

Query: 599  EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
             EAGK+  ++L    K +  T + L+  Y   G P  A+    RM 
Sbjct: 1028 AEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMI 1073



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 163/670 (24%), Positives = 281/670 (41%), Gaps = 70/670 (10%)

Query: 74  RHPLVREVCRLI-----ELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFF 128
           R P  R  CR +     E R +  P   G + ++LRS           + AD   AL+ F
Sbjct: 40  RRPSSRAGCRQLAPPPCEERVS-RPGDAGNVVHMLRS----------AAAADPEEALELF 88

Query: 129 YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSR 188
               RQ R  H       MLE++          +V  LM R+ I+     F  +  A   
Sbjct: 89  LSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGV 148

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
            G LR+A   L +M++A +  N    N  I+ LV      +A+   + M   G+ P V T
Sbjct: 149 EGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRT 208

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM- 307
           Y+ L+  +      +  + L+ EM  +G  P+  SY   +  L +  R++E   ++ KM 
Sbjct: 209 YSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKME 268

Query: 308 --------VNDSNLFH---DQGRIEEAKELVNQMSQMGCIPD------------------ 338
                   V ++ L     D GR+ +AK++  +M      PD                  
Sbjct: 269 EEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSR 328

Query: 339 -----------------VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
                            VV+YTA V+  C+VG +D+A  +  +M   G  P   SY + +
Sbjct: 329 SVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLI 388

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G     +   A E+ N       TPN  T+ + ++   + G+  +A      M  KG  
Sbjct: 389 SGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIV 448

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P  V  N ++  L + G++  AK+   E    G + + + +T +I+   +  + +EA+ +
Sbjct: 449 PDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKI 508

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
             +M   +  PD +   ++ID L K GR  EA ++  ++    L PT  TY T++    +
Sbjct: 509 FAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGR 568

Query: 562 VGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G+V+++++LLE M S         YN V++ LC  G +  A  +L  +       D S+
Sbjct: 569 EGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSS 628

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
            + ++   + +     A+ + C+M  + L PD      +    +  G  +EA    L  V
Sbjct: 629 YNTVMYGLVKEDRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKEA----LHTV 683

Query: 680 ERGHIQPKSE 689
               +QP S+
Sbjct: 684 REYILQPDSK 693



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 154/321 (47%), Gaps = 19/321 (5%)

Query: 210  NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
            N LIC      LV  + +  A      M+  G  P+  TY+ ++       RI+D +K+ 
Sbjct: 770  NALICG-----LVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQ 824

Query: 270  DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------------NLFHD 316
            +EM  KG     V+Y T++  L K K + E  +L  +++++               L  D
Sbjct: 825  EEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKD 884

Query: 317  QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
             G IE+A+ L ++M + GC P+   Y  ++NG+   G+ ++  ++ + M   G  P+  S
Sbjct: 885  -GNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKS 943

Query: 377  YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
            YT  ++ LC +G+  +         +    P+ ITY++++HGL + G+L EA  +  +M 
Sbjct: 944  YTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDME 1003

Query: 437  KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            KKG  P     N LI  L + GK   A K  +E L KG   NV  + +LIRG+   G  E
Sbjct: 1004 KKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPE 1063

Query: 497  EALSLLDDMYLCKKDPDTVTY 517
             A +    M +    P++ TY
Sbjct: 1064 NAFAAYGRMIVGGCRPNSSTY 1084



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 127/559 (22%), Positives = 243/559 (43%), Gaps = 18/559 (3%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
            D I Y MM++  SK      A ++   M      C P+  A + L+    +AG+   A  
Sbjct: 485  DNITYTMMIKCCSKASNADEAMKIFAEMIEN--RCAPDVLAMNSLIDMLYKAGRGNEAWK 542

Query: 198  VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            +   +++  + P     NT +  L    K+ + ++ LE M      PN++TYN ++   C
Sbjct: 543  IFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLC 602

Query: 258  DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL---MEKMVNDSNL- 313
                +  A+ ++  M + GC PD  SY TVM  L KE R+ E   +   M+K++      
Sbjct: 603  KNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYAT 662

Query: 314  -------FHDQGRIEEAKELVNQ-MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                   F   G ++EA   V + + Q     D  +  +++ G  +    +++ +  + +
Sbjct: 663  VCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENI 722

Query: 366  YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
               G   + +  +  +  LC + ++L A E++   E    +    +Y+ ++ GL  E  +
Sbjct: 723  ASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLI 782

Query: 426  SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
              A ++  EM + G  P     +L++ ++ +  +++   K  +E  NKG     V + ++
Sbjct: 783  DIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTI 842

Query: 486  IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
            I G  +   L+EA++L   +      P   TY  ++D L K+G +E+A  L  +ML  G 
Sbjct: 843  ISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGC 902

Query: 546  VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGK 603
             P    Y  +++ Y   G  E + +L E M+ +       +Y  VI+ LC+ G L +   
Sbjct: 903  EPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLS 962

Query: 604  ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
               ++     + D  T ++L+      G    A  +   M  + + P+L     +   L 
Sbjct: 963  YFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLG 1022

Query: 664  LEGKSEEADTLMLRFVERG 682
              GK+ EA  +    + +G
Sbjct: 1023 KAGKAAEAGKMYEELLAKG 1041



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 169/421 (40%), Gaps = 62/421 (14%)

Query: 67   VLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQ 126
            +L +D F  P++R +C+  E  +A   +L  +  NL  SLK     A++    DE     
Sbjct: 727  LLLDDLFLSPIIRHLCKHKEALAAH--ELVKKFENLGVSLKTGSYNALICGLVDE----- 779

Query: 127  FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV-- 184
                                         L   A+ +   M R G  C P+ F+Y ++  
Sbjct: 780  ----------------------------DLIDIAEELFSEMKRLG--CDPDEFTYHLILD 809

Query: 185  AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
            A  ++ ++ + + +   M         +  NT I  LV    L +A+    ++   G +P
Sbjct: 810  AMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSP 869

Query: 245  NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
               TY  L+ G      I+DA  L DEM   GC P+   Y  ++                
Sbjct: 870  TPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILL---------------- 913

Query: 305  EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                   N +   G  E+  EL   M + G  PD+ +YT V++  C  G L+      +Q
Sbjct: 914  -------NGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQ 966

Query: 365  MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
            +   G +P+ ++Y   ++GL  +G+  EA  + N  E++   PN  TY+ ++  L + GK
Sbjct: 967  LTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGK 1026

Query: 425  LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             +EA  +  E++ KG+ P     N LI+     G  + A       +  GC  N   +  
Sbjct: 1027 AAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQ 1086

Query: 485  L 485
            L
Sbjct: 1087 L 1087


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 230/475 (48%), Gaps = 32/475 (6%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR 165
           L P  +  V+    D   A + F WA +Q ++ H+      +L +  K +  + A    +
Sbjct: 67  LVPDLVGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQ 126

Query: 166 LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
              +   E    +++ LM  + +AG ++ A+ +   M+ + +A  L   N  +  L  G 
Sbjct: 127 SHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIA-VLRSHNIVLRGLCSGG 185

Query: 226 KLAKALRFLERMQLAGI-TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           K++ A    + M  +GI +PN+++Y  +I G C   ++  AI L  +M  K   PD V+Y
Sbjct: 186 KISMAWEVFKDM--SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTY 243

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
             ++  L K++R+KE  DL E                EA+         GC P VVTY  
Sbjct: 244 GALIDGLGKQRRVKEAYDLFE----------------EAR-------AKGCHPTVVTYNT 280

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
           +++G C+ G ++ A  +   M      KP+  +Y+A +NGL  + +  +A E+     + 
Sbjct: 281 MIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDT 340

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREM-VKKGFFPTPVEINLLIQSLCREGKMDG 462
             +P+ +TY+ ++ GL + G   +A ++ R+M V     P  +   +LI   C+  ++  
Sbjct: 341 GCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGD 400

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM-YLCKKDPDTVTYTTII 521
           A K  +E   +    + V FT++I+  C++  ++EA  L + +   CK  PD+V + T++
Sbjct: 401 AVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCK--PDSVLFNTML 458

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
               K  R+++A +L  +ML  G  PT+ TY  ++  +C+ GR  D L +  +M+
Sbjct: 459 AGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMI 513



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 200/416 (48%), Gaps = 21/416 (5%)

Query: 235 ERMQLAG----ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           E  Q AG     T N  T N L+  Y    R++DA             PD+VSY T+M  
Sbjct: 87  EVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNG 146

Query: 291 LCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPD 338
             K   +K+   L  +M  DS +                G+I  A E+   MS +   P+
Sbjct: 147 FFKAGDVKKALALFGEM-KDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFS-PN 204

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           +++YT +++G C+  ++D+A  + +QM      P+ V+Y A ++GL    +  EA ++  
Sbjct: 205 LISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFE 264

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF-PTPVEINLLIQSLCRE 457
            +  +   P  +TY+ ++ GL + G++  A  +  +MV++    P     + LI  L   
Sbjct: 265 EARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLS 324

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK-DPDTVT 516
            + + A +  +E L+ GC+ +VV + +L+ G C+ G  ++A+ +   M +    DP+ +T
Sbjct: 325 NRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVIT 384

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           YT +ID   K  R+ +A +L  +M  + L+P  VT+ TVI + C+  R+++  +L E + 
Sbjct: 385 YTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIG 444

Query: 577 SKQKCRTA-YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
              K  +  +N ++   C    +++A K+  ++L +      +T   LV  +   G
Sbjct: 445 KTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTG 500



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 169/351 (48%), Gaps = 9/351 (2%)

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPD 338
           PD  + + V  +  K+ +    R     +++   ++    R+E+A        +    PD
Sbjct: 80  PDPNTAWEVFQWAGKQSKFTHNRFTCNNLLS---VYVKARRVEDAHLFFQSHMKNVFEPD 136

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
            V+Y  ++NGF + G++ +A  +  +M   G      S+   L GLC  GK   A E+  
Sbjct: 137 EVSYNTLMNGFFKAGDVKKALALFGEMKDSGIA-VLRSHNIVLRGLCSGGKISMAWEVFK 195

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                 ++PN I+Y++++ GL +  K+ +A  + ++MV K  +P  V    LI  L ++ 
Sbjct: 196 -DMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQR 254

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK-DPDTVTY 517
           ++  A    +E   KGC   VV + ++I G C+ G +E AL+L DDM       PD  TY
Sbjct: 255 RVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTY 314

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
           + +I+ L+ + R E+A EL  +ML  G  P VVTY T++   C+ G  +  +++  KM  
Sbjct: 315 SALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGV 374

Query: 578 KQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
              C      Y  +I+  C    L +A K+  ++   +   DA T   +++
Sbjct: 375 GNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQ 425



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 164/352 (46%), Gaps = 23/352 (6%)

Query: 113 AVLRSQ--------ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           AVLRS         +  ++++ +  + D    +  + I Y +M++ L K++    A  + 
Sbjct: 169 AVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLF 228

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           + M  + I      +  L+    +  +++ A  +    +     P ++  NT I  L   
Sbjct: 229 KQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKC 288

Query: 225 NKLAKALRFLERM-QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
            ++  AL   + M +   + P++ TY+ LI G    +R + A +L +EM   GCSPD V+
Sbjct: 289 GRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVT 348

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKM----VNDSNL---------FHDQGRIEEAKELVNQM 330
           Y T++  LCK     +  ++  KM    V D N+         F    R+ +A +L  +M
Sbjct: 349 YNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEM 408

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
                +PD VT+T V+   C+   +D+A ++ + +    CKP++V +   L G C   + 
Sbjct: 409 EGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI-GKTCKPDSVLFNTMLAGYCKITRI 467

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
            +A+++ +   +    P   TY+ ++ G  R G+ S+A  +  EM++ GF P
Sbjct: 468 DDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 158/335 (47%), Gaps = 14/335 (4%)

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
           + +   ++ A    Q    +  +P+ VSY   +NG    G   +A  +    ++      
Sbjct: 112 YVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGI--- 168

Query: 409 AI--TYSVVMHGLRREGKLSEACDVVREMVKKGFF-PTPVEINLLIQSLCREGKMDGAKK 465
           A+  ++++V+ GL   GK+S A +V ++M   G F P  +   ++I  LC+  K+D A  
Sbjct: 169 AVLRSHNIVLRGLCSGGKISMAWEVFKDM--SGIFSPNLISYTIMIDGLCKSRKVDKAIT 226

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
             ++ ++K    +VV + +LI G  ++  ++EA  L ++       P  VTY T+ID L 
Sbjct: 227 LFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLC 286

Query: 526 KNGRVEEATELMMKMLSKG-LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR-- 582
           K GR+E A  L   M+ +  L P + TY  +I+      R E   +L E+ML    C   
Sbjct: 287 KCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLD-TGCSPD 345

Query: 583 -TAYNQVIENLCSFGYLEEAGKILGKV-LRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
              YN +++ LC  G  ++A +I  K+ +      +  T  VL++ +        A K+A
Sbjct: 346 VVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLA 405

Query: 641 CRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
             M  R+L+PD      V ++L  E + +EA  L 
Sbjct: 406 KEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF 440



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 3/144 (2%)

Query: 140 DP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           DP  I Y ++++   K      A ++ + M  R +      F+ ++    +  ++  A  
Sbjct: 379 DPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHE 438

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   + K    P+ ++ NT +       ++  A +  +RM  +G  P + TY  L+ G+C
Sbjct: 439 LFESIGKTC-KPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFC 497

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDK 281
              R  DA+ +  EM   G  P++
Sbjct: 498 RTGRYSDALIMYHEMIEMGFPPER 521


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 243/524 (46%), Gaps = 15/524 (2%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
             Y  M+++L KT   + A RV   M   G +      + LM  Y    ++ NA+ +   
Sbjct: 263 FTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKE 322

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
             K  + P  ++    I          KA     +M   G+ P+    + ++KG  +  R
Sbjct: 323 TLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRR 382

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDSNL 313
            KDA+ L +EM   G  PD  +Y  ++ + C+  +++E  +L ++M        +N  N 
Sbjct: 383 WKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNS 441

Query: 314 ----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
               +  +G ++EA +L ++M   G  P+VVTY  ++ G+    + D A  +L +M  +G
Sbjct: 442 LLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNG 501

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
              N  +Y   +NG+C   +  E   M+ +   E + P  +TY+ +++G  + G +  A 
Sbjct: 502 VSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAF 561

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            V ++M +KG  P  +     I   CR G  D A K + +   +G   ++V + +LI GF
Sbjct: 562 TVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGF 621

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           CQ+G++  AL LL  +      P+TV Y ++I        ++E ++    M+  G+V   
Sbjct: 622 CQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADT 681

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN--QVIENLCSFGYLEEAGKILGK 607
            TY T+I  + + G V   L+L  +M++K     A+    +   LC  G ++ A K+L +
Sbjct: 682 STYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEE 741

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           + R   + +    ++L+  YL       A+++   M N  + PD
Sbjct: 742 MRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPD 785



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 197/406 (48%), Gaps = 17/406 (4%)

Query: 167 MARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           MA  G+   P+ F+Y  L+  + +A KLR A+ +   M+KA V P++   N+ +      
Sbjct: 393 MADSGL---PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKK 449

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             + +A++    M + G  PNV+TY  L++GY       +A  L+DEM   G S +  +Y
Sbjct: 450 GCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTY 509

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
             ++  +C   R+ EV  +++  +++             N F   G +  A  +  QM +
Sbjct: 510 NVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMRE 569

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G  P+++TYT+ ++G+CR G  D A KML  +   G +P+ V+Y A +NG C  G    
Sbjct: 570 KGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSH 629

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A +++    ++   PN + Y+ ++ G +    + E       M+K G          LI 
Sbjct: 630 ALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLID 689

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
              ++G +  A +   E + KG   +   FT+L  G C+ GD++ A  LL++M      P
Sbjct: 690 GFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRP 749

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           +   Y  +I+   ++ +++EA  L  +ML+ G+ P   TY  ++ +
Sbjct: 750 NVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSK 795



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 151/630 (23%), Positives = 257/630 (40%), Gaps = 127/630 (20%)

Query: 117 SQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP 176
           S A + +AL   +   R   YR D  ++  ++    K  + + A R+   M    I+   
Sbjct: 171 SSAKDALAL---FMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQ 227

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
             ++  + A  + G    A+ +L  M++           T + VLV   ++ +ALR  + 
Sbjct: 228 RVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDE 287

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT---------- 286
           M+ AG   +V+    L++GYC    + +A+ L  E    G  P KV Y            
Sbjct: 288 MRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGM 347

Query: 287 -------------------------VMGYLCKEKRIKEVRDLMEKMVND--------SNL 313
                                    V+  L  ++R K+   L E+M +         +NL
Sbjct: 348 TQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNL 407

Query: 314 FH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
            H      ++ EA  L ++M + G  P + TY +++ G+C+ G +D+A K+  +M   G 
Sbjct: 408 IHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGF 467

Query: 371 KPNTV-----------------------------------SYTAFLNGLCHNGKSLEARE 395
           KPN V                                   +Y   +NG+C   +  E   
Sbjct: 468 KPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDG 527

Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
           M+ +   E + P  +TY+ +++G  + G +  A  V ++M +KG  P  +     I   C
Sbjct: 528 MLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYC 587

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL------------- 502
           R G  D A K + +   +G   ++V + +LI GFCQ+G++  AL LL             
Sbjct: 588 RTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTV 647

Query: 503 ----------------------DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
                                 + M       DT TYTT+ID  SK+G V  A EL  +M
Sbjct: 648 VYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEM 707

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGY--- 597
           ++KG +P   T+  + H  C+ G ++   KLLE+M   ++     N  I N+   GY   
Sbjct: 708 MAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEM---RRLDVRPNVFIYNMLINGYLRD 764

Query: 598 --LEEAGKILGKVLRTASKADASTCHVLVE 625
             L+EA ++  ++L    + D +T  +LV 
Sbjct: 765 CKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 140/582 (24%), Positives = 240/582 (41%), Gaps = 59/582 (10%)

Query: 149 EILSKTKLCQGAKRVLRL---MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           ++L +T     AK  L L   M  RG       F  LM A  + G   +A+ +   M  A
Sbjct: 162 DLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGA 221

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            + P+  +   AI  L       +ALR L  M+  G      TY  ++       R+++A
Sbjct: 222 EIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEA 281

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH---------- 315
           +++ DEM   G   D +   T+M   C  + +    +L ++ + D  +            
Sbjct: 282 LRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRG 341

Query: 316 -DQ-GRIEEAKELVNQMSQMGC----------------------------------IPDV 339
            DQ G  ++A EL  QM+  G                                   +PDV
Sbjct: 342 CDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDV 401

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            TY  +++  C+  +L +A  +  +M   G KP+  +Y + L G C  G   EA ++ + 
Sbjct: 402 FTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSE 461

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC---R 456
              E + PN +TY  +M G   +     A  ++ EM + G        N+LI  +C   R
Sbjct: 462 MPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDR 521

Query: 457 EGKMDGA-KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
             ++DG  K FM E    G    ++ + S+I GF + G +  A ++   M      P+ +
Sbjct: 522 VCEVDGMLKSFMSE----GFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNII 577

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           TYT+ ID   + G  + A +++  +  +GL P +V Y  +I+ +CQ G +   L+LL  +
Sbjct: 578 TYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVIL 637

Query: 576 LSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           L          YN +I    +   ++E  K    +++    AD ST   L++ +   G  
Sbjct: 638 LKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNV 697

Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
             A ++   M  +  IPD      ++  L   G  + A  L+
Sbjct: 698 AFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLL 739



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 109/485 (22%), Positives = 188/485 (38%), Gaps = 66/485 (13%)

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           G+ P++ +   L+         KDA+ L  EM  +G   D   +  +M    KE      
Sbjct: 152 GVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKE------ 205

Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
                            G  E+A  L ++M      PD   Y   +   C++G+  +A +
Sbjct: 206 -----------------GMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALR 248

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           ML++M   G      +Y   ++ L   G+  EA  + +   +     + I  + +M G  
Sbjct: 249 MLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYC 308

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQS------------LCREGKMDG------ 462
              ++  A ++ +E +K G  PT V   +LI+             LCR+    G      
Sbjct: 309 LRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTF 368

Query: 463 -----------------AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
                            A    +E  + G   +V  + +LI   CQ   L EAL+L D M
Sbjct: 369 ELSLVLKGLLNDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRM 427

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P   TY +++    K G ++EA +L  +M  +G  P VVTY T++  Y      
Sbjct: 428 KKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDF 487

Query: 566 EDLLKLLEKMLSKQKCRT----AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           ++   LL++M  KQ   +     YN +I  +C    + E   +L   +         T +
Sbjct: 488 DNAYALLDEM--KQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYN 545

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
            ++  ++  G+   A+ V  +M  + L P++       +     G S+ A   ML  V R
Sbjct: 546 SIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMA-LKMLNDVRR 604

Query: 682 GHIQP 686
             +QP
Sbjct: 605 RGLQP 609



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/344 (20%), Positives = 140/344 (40%), Gaps = 36/344 (10%)

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A +    M   G +PD+ + T ++    R      A  +  +M   G + +   + A ++
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
                G   +A  + +        P+   Y++ +  L + G    A  ++REM + GF  
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
                  ++  L + G+M+ A +   E  + G  ++V+  T+L+RG+C + ++  AL+L 
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT-------------- 548
            +       P  V Y  +I    + G  ++A EL  +M  +GL+P+              
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380

Query: 549 --------------------VVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYN 586
                               V TY  +IH +CQ  ++ + L L ++M     +     YN
Sbjct: 381 RRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYN 440

Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
            ++   C  G ++EA K+  ++     K +  T   L+  Y+ K
Sbjct: 441 SLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAK 484



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 10/231 (4%)

Query: 426 SEACDVVREMVKKGFFP-TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           S A D    MV +G  P      +LLI++       D    FM E   +G  V+   F +
Sbjct: 139 SAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFM-EMRGRGYRVDAWMFDA 197

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L+    ++G  E+A+ L D+M   + DPD   Y   I AL K G    A  ++ +M   G
Sbjct: 198 LMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVG 257

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYL--EEAG 602
                 TYRT++    + GR+E+ L++ ++M    K     + ++      GY   +E G
Sbjct: 258 FDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGK---KMDVIVATTLMRGYCLRQEVG 314

Query: 603 KILGKVLRTASKADAST---CHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
             L     T       T     VL+      G+   AY++  +M  + L+P
Sbjct: 315 NALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLP 365


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 230/453 (50%), Gaps = 22/453 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A+ +L  M  +G+     ++S L+    R G L +AM +   M +  V+ N+    T I 
Sbjct: 424 ARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLIS 483

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +A R  ++M  + + PN +T+N +I+GYC +  ++ A +L D+M  +G +P
Sbjct: 484 GFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTP 543

Query: 280 DKVSYYTVMGYLC---KEKRIKEVRDLMEK---MVNDSNL------FHDQGRIEEAKELV 327
           D  +Y +++  LC      + KE  D +E    ++N  +L      F  +GR+ E   + 
Sbjct: 544 DNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIW 603

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           ++M   G   D++++T +V    ++ + ++   + ++M   G KP+ V +T  ++     
Sbjct: 604 DEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKE 663

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
              ++A    +    +  +PN +TY+V+++ L + G LS A  +  EM+   F P     
Sbjct: 664 ENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTY 723

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
           N  +  L  EG+++ AK  +   + +GC  N V F +LI+GFC+ G ++ A+ L+ +   
Sbjct: 724 NCFLDFLANEGELEKAK-VLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTE 782

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV-GRVE 566
               PD ++Y+TII+ L K G + +A +L  +ML KGL P +V Y  +I R+C + G  +
Sbjct: 783 SGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILI-RWCNIHGEFD 841

Query: 567 DLLKLLEKMLS-KQKCRTAYN------QVIENL 592
             L +   M++ K    T  N      +VIEN+
Sbjct: 842 KGLGIYSDMVNLKYADDTPVNHKGSGRKVIENM 874



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/530 (24%), Positives = 233/530 (43%), Gaps = 62/530 (11%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           + R A  +   M    + PN +     IH L     +  AL   +RM+  GI   V  YN
Sbjct: 350 RFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYN 409

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI GYC       A  L++EM  KG +P   SY  ++  LC++  +    +L  +M  +
Sbjct: 410 SLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARN 469

Query: 311 S------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                        + F   G ++EA  L ++M     +P+ VT+  ++ G+CRVG + +A
Sbjct: 470 GVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKA 529

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            ++  QM   G  P+  +Y + ++ LC    +++A+E ++  E      N+ + + +M+G
Sbjct: 530 FQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYG 589

Query: 419 LRREGKLSEACDV-----------------------------------VREMVKKGFFPT 443
             +EG+L+E   +                                    REM +KG  P 
Sbjct: 590 FCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPD 649

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V    +I    +E  +  A     + +  GC+ NVV +T LI   C+ G L  A  L +
Sbjct: 650 NVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCE 709

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M + +  P++ TY   +D L+  G +E+A  L   +L +G +   VT+ T+I  +C+ G
Sbjct: 710 EMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATIL-EGCLANTVTFNTLIKGFCKAG 768

Query: 564 RVEDLLKLLEKMLSK---QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           +++  + L++          C  +Y+ +I  LC  G + +A ++  ++L    K D    
Sbjct: 769 QIQGAIDLMQNNTESGFFPDC-ISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAY 827

Query: 621 HVL-----VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
           ++L     +    +KG+ + +      M N     D  +  K S R ++E
Sbjct: 828 NILIRWCNIHGEFDKGLGIYS-----DMVNLKYADDTPVNHKGSGRKVIE 872



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/514 (24%), Positives = 224/514 (43%), Gaps = 50/514 (9%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M  RGI      +  L+  + R  +L  A+ +   M      P++  C+  +  L     
Sbjct: 256 MVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGH 315

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + KA R    +   G+ PN+   N LI   C   R ++A +L   M  +G  P++V+Y  
Sbjct: 316 IDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAI 375

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMG 334
           ++  LCK   + +   + ++M                N +       +A+ L+N+M + G
Sbjct: 376 LIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKG 435

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P   +Y+ ++ G CR G+L  A ++ ++M  +G   N  ++T  ++G C +G   EA 
Sbjct: 436 LAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAA 495

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            + +   +    PN +T++V++ G  R G + +A  +  +MV +G  P       LI  L
Sbjct: 496 RLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVL 555

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM--------- 505
           C       AK+F+ +  N    +N  + T+L+ GFC++G L E   + D+M         
Sbjct: 556 CLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDL 615

Query: 506 -------YLCKK-------------------DPDTVTYTTIIDALSKNGRVEEATELMMK 539
                  Y   K                    PD V +T +ID  SK   + +A     K
Sbjct: 616 ISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDK 675

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGY 597
           M++ G  P VVTY  +I+  C+ G +     L E+ML  +    +  YN  ++ L + G 
Sbjct: 676 MIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGE 735

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           LE+A K+L   +     A+  T + L++ +   G
Sbjct: 736 LEKA-KVLHATILEGCLANTVTFNTLIKGFCKAG 768



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 191/423 (45%), Gaps = 14/423 (3%)

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
           +Y R  + R+A  VL +   + +A      +  +  L+   + A A    + M       
Sbjct: 134 SYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPL 193

Query: 245 NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           +   Y   I+ YC++  +  A  L+  M  KG     V Y  +M  LC+  R+ E  ++ 
Sbjct: 194 DEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVK 253

Query: 305 EKMVNDS---------NLFHDQGRIEE---AKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
             MV             L +   R EE   A E+ + M  +  +P V + + +V+G  + 
Sbjct: 254 NSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKR 313

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
           G +D+A ++   +   G  PN  +  A ++ LC + +  EA  +          PN +TY
Sbjct: 314 GHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTY 373

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           ++++H L + G + +A  +   M +KG   T    N LI   C+      A+  + E + 
Sbjct: 374 AILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVE 433

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           KG A +  +++ LI G C+KGDL  A+ L  +M       +  T+TT+I    K+G ++E
Sbjct: 434 KGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDE 493

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIE 590
           A  L  KM+   +VP  VT+  +I  YC+VG V    +L ++M+ +        Y  +I 
Sbjct: 494 AARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLIS 553

Query: 591 NLC 593
            LC
Sbjct: 554 VLC 556



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 209/477 (43%), Gaps = 34/477 (7%)

Query: 102 LLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAK 161
           L   +K RQ  A+ R   DE V          Q ++  D  VY   +    + +   GA+
Sbjct: 167 LFALIKIRQF-ALARDLFDEMV----------QCKFPLDEYVYTAGIRAYCEIRNLDGAR 215

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
            +L  M  +G++     ++ LM    R  ++  A+ V + M +  +  + +   T ++  
Sbjct: 216 GLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGF 275

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
               +L  AL   + M      P+V + + ++ G      I  A +L   +   G  P+ 
Sbjct: 276 CRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNL 335

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
            +   ++  LCK++R +E                       A+ L   M+  G  P+ VT
Sbjct: 336 FACNALIDKLCKDRRFRE-----------------------AERLFRGMANRGLEPNEVT 372

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y  +++  C+ G +D A  M  +M   G +     Y + +NG C +    +AR ++N   
Sbjct: 373 YAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMV 432

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           E+   P+A +YS ++ GL R+G L+ A ++ REM + G          LI   C++G MD
Sbjct: 433 EKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMD 492

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A +   + ++     N V F  +I G+C+ G++ +A  L D M      PD  TY ++I
Sbjct: 493 EAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLI 552

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
             L       +A E +  + +  +V    +  T+++ +C+ GR+ +   + ++M ++
Sbjct: 553 SVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRAR 609



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 167/362 (46%), Gaps = 2/362 (0%)

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A++L ++M Q     D   YTA +  +C +  LD A+ +L +M   G K + V Y   + 
Sbjct: 179 ARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMY 238

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           GLC N + LEA E+ N+  E     + +TY  +++G  R  +L  A ++  +M+   F P
Sbjct: 239 GLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVP 298

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
           +    + ++  L + G +D A +        G   N+    +LI   C+     EA  L 
Sbjct: 299 SVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLF 358

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
             M     +P+ VTY  +I +L K G +++A  +  +M  KG+  TV  Y ++I+ YCQ 
Sbjct: 359 RGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQH 418

Query: 563 GRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
                   LL +M+ K    +A  Y+ +I  LC  G L  A ++  ++ R     +  T 
Sbjct: 419 DNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTF 478

Query: 621 HVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVE 680
             L+  +   G    A ++  +M + +++P+      + E     G   +A  L  + V+
Sbjct: 479 TTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVD 538

Query: 681 RG 682
           RG
Sbjct: 539 RG 540



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/319 (22%), Positives = 143/319 (44%), Gaps = 14/319 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++ +L  T     AK  +  +    +     + + LM  + + G+L    ++ 
Sbjct: 544 DNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIW 603

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+   V  +L+     ++  +  +   K       M+  G+ P+ + + C+I  +   
Sbjct: 604 DEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKE 663

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
             I  A+   D+M   GCSP+ V+Y  ++ +LCK   +   + L E+M+           
Sbjct: 664 ENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTY 723

Query: 312 NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           N F D    +G +E+AK L   + + GC+ + VT+  ++ GFC+ G++  A  ++Q    
Sbjct: 724 NCFLDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTE 782

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+ +SY+  +N LC  G   +A ++ N    +   P+ + Y++++      G+  +
Sbjct: 783 SGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDK 842

Query: 428 ACDVVREMVKKGFF-PTPV 445
              +  +MV   +   TPV
Sbjct: 843 GLGIYSDMVNLKYADDTPV 861



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 112/261 (42%), Gaps = 34/261 (13%)

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           +A DV+R  +  G        + ++ +L +  +   A+    E +     ++   +T+ I
Sbjct: 143 DAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGI 202

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           R +C+  +L+ A  LL  M         V Y  ++  L +N RV EA E+   M+ +G+V
Sbjct: 203 RAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIV 262

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILG 606
              VTYRT+++ +C+   +E  L++ + MLS     +                       
Sbjct: 263 ADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSV---------------------- 300

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
                      ++C  +V+    +G    A+++AC +    ++P+L  C  + ++L  + 
Sbjct: 301 -----------ASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDR 349

Query: 667 KSEEADTLMLRFVERGHIQPK 687
           +  EA+ L      RG ++P 
Sbjct: 350 RFREAERLFRGMANRG-LEPN 369


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 181/359 (50%), Gaps = 23/359 (6%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           R G+L      L  M      P+++ C + I       K  KA R +E ++ +G  P+V+
Sbjct: 96  RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVI 155

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN LI G C   R  DA KL+ +M  +GCSP  V++  ++ +LC++  +    D++EKM
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 215

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                                   + GC P+ ++Y  +++GFC+  ++++A + L +M  
Sbjct: 216 -----------------------PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTS 252

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+ V+Y   L  LC +GK   A E++N    +  +P  ITY+ V+ GL + GK  +
Sbjct: 253 RGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQ 312

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  ++ EM  KG  P  +  + L+  L REGK+D A KF  +    G   N + + +++ 
Sbjct: 313 AAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIML 372

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           G C+    + A+  L  M      P   +YT +I+ L+  G  +EA EL+ ++  +G+V
Sbjct: 373 GLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVV 431



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 181/361 (50%), Gaps = 23/361 (6%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N  +  LV   +L +  RFLE M   G  P+++    LI+G+C + + + A ++++ +  
Sbjct: 88  NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
            G  PD ++Y  ++  +C                         GR  +A++L+  M + G
Sbjct: 148 SGAVPDVITYNVLISGMC-----------------------STGRWMDAEKLLADMVRRG 184

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C P VVT+  ++N  CR G L +A  +L++M  HGC PN++SY   L+G C   K   A 
Sbjct: 185 CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAI 244

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E +         P+ +TY+ ++  L ++GK+  A +++ ++  KG  P  +  N +I  L
Sbjct: 245 EYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 304

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            + GK D A K + E   KG   +++ ++SL+ G  ++G ++EA+    D+ +    P+ 
Sbjct: 305 SKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNA 364

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           +TY  I+  L K  + + A + +  M+ +G  PT  +Y  +I      G  ++ L+LL +
Sbjct: 365 ITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNE 424

Query: 575 M 575
           +
Sbjct: 425 L 425



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 178/318 (55%), Gaps = 2/318 (0%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            G +EE    +  M   G IPD++  T+++ GFC++G+  +A ++++ +   G  P+ ++
Sbjct: 97  NGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVIT 156

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   ++G+C  G+ ++A +++        +P+ +T++++++ L R+G L  A DV+ +M 
Sbjct: 157 YNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMP 216

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           K G  P  +  N L+   C+E KM+ A +++ +  ++GC  ++V + +L+   C+ G ++
Sbjct: 217 KHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVD 276

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            A+ LL+ +      P  +TY T+ID LSK G+ ++A +L+ +M +KGL P ++TY +++
Sbjct: 277 AAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLV 336

Query: 557 HRYCQVGRVEDLLKLLE--KMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
               + G+V++ +K     ++L  +     YN ++  LC     + A   L  +++   K
Sbjct: 337 GGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCK 396

Query: 615 ADASTCHVLVESYLNKGI 632
              ++  +L+E    +G+
Sbjct: 397 PTEASYTILIEGLAYEGL 414



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 175/351 (49%), Gaps = 33/351 (9%)

Query: 162 RVLRLMARRG-----IECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
           R L  M  RG     I C     + L+  + + GK R A  ++ +++ +   P+++  N 
Sbjct: 105 RFLESMVYRGDIPDIIPC-----TSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNV 159

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            I  +    +   A + L  M   G +P+V+T+N LI   C    +  AI ++++MP  G
Sbjct: 160 LISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHG 219

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI 336
           C+P+ +SY  ++   CKEK                       ++E A E + +M+  GC 
Sbjct: 220 CTPNSLSYNPLLHGFCKEK-----------------------KMERAIEYLGKMTSRGCY 256

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PD+VTY  ++   C+ G++D A ++L Q+   GC P  ++Y   ++GL   GK+ +A ++
Sbjct: 257 PDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKL 316

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           ++    +   P+ ITYS ++ GL REGK+ EA     ++   G  P  +  N ++  LC+
Sbjct: 317 LDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCK 376

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
             K D A  F+   + +GC     ++T LI G   +G  +EAL LL+++ L
Sbjct: 377 ARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCL 427



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 180/347 (51%), Gaps = 12/347 (3%)

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           R GEL++  + L+ M + G  P+ +  T+ + G C  GK+ +A  ++   E+    P+ I
Sbjct: 96  RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVI 155

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY+V++ G+   G+  +A  ++ +MV++G  P+ V  N+LI  LCR+G +  A   +++ 
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 215

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
              GC  N +++  L+ GFC++  +E A+  L  M      PD VTY T++ AL K+G+V
Sbjct: 216 PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKV 275

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQV 588
           + A EL+ ++ SKG  P ++TY TVI    +VG+ +   KLL++M +K  +     Y+ +
Sbjct: 276 DAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSL 335

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY-----LNKGIPLLAYKVACRM 643
           +  L   G ++EA K    +     K +A T + ++         ++ I  LAY     M
Sbjct: 336 VGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAY-----M 390

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEE 690
             R   P       + E L  EG ++EA  L+     RG ++  S E
Sbjct: 391 VQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSSAE 437



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 151/302 (50%), Gaps = 27/302 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
           D I Y +++  +  T     A+++L  M RRG  C P    F+ L+    R G L  A+ 
Sbjct: 153 DVITYNVLISGMCSTGRWMDAEKLLADMVRRG--CSPSVVTFNILINFLCRKGLLGRAID 210

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           VL  M K    PN L  N  +H      K+ +A+ +L +M   G  P+++TYN L+   C
Sbjct: 211 VLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALC 270

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              ++  A++L++++  KGCSP  ++Y TV+  L K                        
Sbjct: 271 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSK-----------------------V 307

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G+ ++A +L+++M   G  PD++TY+++V G  R G++D+A K    +   G KPN ++Y
Sbjct: 308 GKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITY 367

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
            A + GLC   K+  A + +    +    P   +Y++++ GL  EG   EA +++ E+  
Sbjct: 368 NAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCL 427

Query: 438 KG 439
           +G
Sbjct: 428 RG 429



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 2/253 (0%)

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           L+ L  NG+  E    + +       P+ I  + ++ G  + GK  +A  ++  +   G 
Sbjct: 91  LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  +  N+LI  +C  G+   A+K + + + +GC+ +VV F  LI   C+KG L  A+ 
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAID 210

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           +L+ M      P++++Y  ++    K  ++E A E + KM S+G  P +VTY T++   C
Sbjct: 211 VLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALC 270

Query: 561 QVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           + G+V+  ++LL ++ SK        YN VI+ L   G  ++A K+L ++     K D  
Sbjct: 271 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDII 330

Query: 619 TCHVLVESYLNKG 631
           T   LV     +G
Sbjct: 331 TYSSLVGGLSREG 343



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 117/234 (50%), Gaps = 4/234 (1%)

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           +E N  +  L R G+++   +F++  + +G   +++  TSLIRGFC+ G   +A  +++ 
Sbjct: 85  IESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEI 144

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           +      PD +TY  +I  +   GR  +A +L+  M+ +G  P+VVT+  +I+  C+ G 
Sbjct: 145 IEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGL 204

Query: 565 VEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           +   + +LEKM  K  C     +YN ++   C    +E A + LGK+       D  T +
Sbjct: 205 LGRAIDVLEKM-PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYN 263

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
            L+ +    G    A ++  ++ ++   P L     V + L   GK+++A  L+
Sbjct: 264 TLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLL 317


>gi|449449679|ref|XP_004142592.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Cucumis sativus]
 gi|449516715|ref|XP_004165392.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Cucumis sativus]
          Length = 594

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 231/448 (51%), Gaps = 16/448 (3%)

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
           E  + ++  +   GKL  A  V+ +M      P+   C   I   V  +++ KA++ L+ 
Sbjct: 138 ETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKI 197

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL----C 292
           M ++G  P+++TYN +I   C    ++ AI+L+++M L GC PD ++Y  V+ ++    C
Sbjct: 198 MVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGC 257

Query: 293 KEKRIKEVRDLMEK-----MVNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
            ++ ++  ++ + K     ++  + L    +  +G +  A E++ +M+  GC PD+VTY 
Sbjct: 258 FDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVC-ALEVLEEMANEGCYPDLVTYN 316

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
           +++N  C+ G+ + A  ++  +  HG  P+ V+Y   L+ L   G   E  E++      
Sbjct: 317 SLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSIS 376

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P  +T +V+++GL + G L  A + + +M      P  +  N L+ +LC+EG +D A
Sbjct: 377 LQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEA 436

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            + +    +  C+  ++++ +++ G  +KG +++A+SL   M      PD  T+ +II  
Sbjct: 437 FQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWG 496

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKC 581
             ++ +  EA E +  +L  G       YR ++H  C   +V+  +++LE MLS   +  
Sbjct: 497 FCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSN 556

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVL 609
            T Y+ +I ++ S G  E+A ++  K++
Sbjct: 557 ETIYSTIINSIASAGLKEQADELRQKLI 584



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 197/425 (46%), Gaps = 39/425 (9%)

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           T N +++ +C   ++ +A +++D M  +   PD                        E  
Sbjct: 139 TNNVILQKFCYKGKLMEASRVVDIMASRNQIPD-----------------------FECC 175

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +N    F +  R+++A +++  M   G +PD++TY  V+   C+ G L+ A ++L  M  
Sbjct: 176 INMIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSL 235

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            GC P+ ++Y A +  +  NG   +A E       +   P  ITY++++  + +      
Sbjct: 236 SGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVC 295

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A +V+ EM  +G +P  V  N LI   C++GK + A   +   L  G   + V + +L+ 
Sbjct: 296 ALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLH 355

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
              ++G  +E   +L  M +  + P  VT   +I+ L KNG ++ A   + +M S   +P
Sbjct: 356 SLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLP 415

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKI 604
            ++TY T++   C+ G V++  +LL  +L+   C     +YN V++ L   GY+++A  +
Sbjct: 416 DIITYNTLLGALCKEGMVDEAFQLLH-LLTDTACSPGLISYNTVLDGLSRKGYMDKAMSL 474

Query: 605 LGKVLRTASKADASTCHVLVESYLN-----------KGIPLLAYKVACRMFNRNLIPDLK 653
             +++      D +T   ++  +             KGI    Y+V    F R L+ +L 
Sbjct: 475 YSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSS-FYRILVHELC 533

Query: 654 LCKKV 658
           L KKV
Sbjct: 534 LNKKV 538



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 161/361 (44%), Gaps = 29/361 (8%)

Query: 113 AVLRSQADERVALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           AV+R   D     Q   +   Q R    P  I Y +++E++ K +    A  VL  MA  
Sbjct: 247 AVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANE 306

Query: 171 GIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
           G  C P+  +Y  L+    + GK  +A  V+  +    + P+ +  NT +H L       
Sbjct: 307 G--CYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWD 364

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
           +    L+ M ++   P V+T N LI G C    +  AI  +++M    C PD ++Y T++
Sbjct: 365 EVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLL 424

Query: 289 GYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
           G LCKE                       G ++EA +L++ ++   C P +++Y  V++G
Sbjct: 425 GALCKE-----------------------GMVDEAFQLLHLLTDTACSPGLISYNTVLDG 461

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
             R G +D+A  +  QM  +G  P+  ++ + + G C + K +EA E +    +  +  N
Sbjct: 462 LSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVN 521

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
           +  Y +++H L    K+  A  V+  M+           + +I S+   G  + A +  Q
Sbjct: 522 SSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQ 581

Query: 469 E 469
           +
Sbjct: 582 K 582



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 169/381 (44%), Gaps = 40/381 (10%)

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           F  +G++ EA  +V+ M+    IPD      ++ GF     +D+A ++L+ M   G    
Sbjct: 147 FCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVMSG---- 202

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
                                            P+ ITY++V+  L ++G L  A +++ 
Sbjct: 203 -------------------------------GVPDIITYNMVIGCLCKQGHLESAIELLN 231

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           +M   G  P  +  N +I+ +   G  D A +F +E L KG    ++ +T LI    +  
Sbjct: 232 DMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHR 291

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
               AL +L++M      PD VTY ++I+   K G+ E+A  ++  +L  G+VP  VTY 
Sbjct: 292 GTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYN 351

Query: 554 TVIHRYCQVGR---VEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           T++H   + G    V+++LK++   L      T  N +I  LC  G L+ A   L ++  
Sbjct: 352 TLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTC-NVLINGLCKNGLLDSAINFLNQMFS 410

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                D  T + L+ +   +G+   A+++   + +    P L     V + L  +G  ++
Sbjct: 411 YNCLPDIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDK 470

Query: 671 ADTLMLRFVERGHIQPKSEEH 691
           A +L  + +E G I P    H
Sbjct: 471 AMSLYSQMMENG-IIPDDTTH 490


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 205/428 (47%), Gaps = 15/428 (3%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           +LR M  RGI         ++ A      L  A+   + +      P L      +  L 
Sbjct: 150 LLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLC 209

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
             +K+ +A    E M   G  P+++ Y+ LI G     R+ +A KL+D M  +G  P  V
Sbjct: 210 KAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAV 269

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQM 330
           +Y +++  LCK  RI+E    +++M                  +   G++E+A  ++ +M
Sbjct: 270 AYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEM 329

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
           +   C PD ++YT  +     +G  ++A+K+ + M   GCKP+  +Y   ++  C  G  
Sbjct: 330 ADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSM 389

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             A  ++   ++    PN   Y+++M G  +  +L EA ++ + ++K G  P+ V  N +
Sbjct: 390 AAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTV 449

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAV--NVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
           I +LC+  KMD A + ++E   +   +  ++V ++ +I G  + G  E A  LL +M   
Sbjct: 450 INALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDN 509

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PD  TYT++I  L+  G+V  A EL+ +ML  G+ P   TY T++   C+   V+  
Sbjct: 510 GVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAA 568

Query: 569 LKLLEKML 576
             LL++M+
Sbjct: 569 WDLLQEMM 576



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 218/474 (45%), Gaps = 30/474 (6%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L++A  R G L +A   L   Q +   PN+   N  +      +        L  M+  G
Sbjct: 102 LLLALVRGGHLSDA---LGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKSRG 158

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           IT N  T+  ++   C    +  A+   + +    C P   +Y  ++  LCK  +++   
Sbjct: 159 ITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERAC 218

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
           D+ E+M+                       + G  PD++ Y+++++G  + G +D+A+K+
Sbjct: 219 DVFEEMI-----------------------RKGYKPDIIAYSSLIDGLSKAGRVDEARKL 255

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           +  M   G  P  V+YT+ + GLC  G+  EA + I         P   TYS ++ G   
Sbjct: 256 VDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIG 315

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            GK+ +A  V+ EM  +   P  +   + I++L   G+ + A+K  +  + KGC  ++  
Sbjct: 316 MGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHT 375

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +  +I  FC++G +  A  +L  M      P+   YT I+D   K+ R+EEA EL  ++L
Sbjct: 376 YGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRIL 435

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK----CRTAYNQVIENLCSFGY 597
             G++P+ VTY TVI+  C++ ++++ L+LL +M  +++        Y+ +I  L   G 
Sbjct: 436 KDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGM 495

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
            E A  +L +++      D  T   L+++    G    A ++   M    + PD
Sbjct: 496 EERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPD 549



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 220/467 (47%), Gaps = 17/467 (3%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
           AL F++WA  +  + H       +L  L +      A   L        E    +F+ L+
Sbjct: 79  ALGFYHWAATRPGFSHTLFTRNSLLLALVRGGHLSDA---LGFFQSSISEPNVSSFNILL 135

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
             ++          +L  M+   +  N       +  L     L KA+ +   +      
Sbjct: 136 RGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCE 195

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P + TY  L+ G C  H+++ A  + +EM  KG  PD ++Y +++  L K  R+ E R L
Sbjct: 196 PTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKL 255

Query: 304 MEKMVN----DSNLFHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           ++ MV      + + +          GRI+EA + + +M +    P V TY+ +V G+  
Sbjct: 256 VDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIG 315

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
           +G++++A  ++++M    C P+T+SYT F+  L   G+  EA ++  T  E+   P+  T
Sbjct: 316 MGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHT 375

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y +++    +EG ++ A  V+R M K    P      +++    +  +++ A +  Q  L
Sbjct: 376 YGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRIL 435

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK--DPDTVTYTTIIDALSKNGR 529
             G   + V + ++I   C+   ++EAL LL +M   K+  +P  VTY+ II  L K G 
Sbjct: 436 KDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGM 495

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
            E A +L+ +M+  G++P   TY ++I      G+V   ++LLE+ML
Sbjct: 496 EERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEML 542



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 204/416 (49%), Gaps = 26/416 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
             Y ++++ L K    + A  V   M R+G +    A+S L+   S+AG++  A  ++ +
Sbjct: 199 FTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDL 258

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M      P  +   + +  L    ++ +A++ ++ M+   + P V TY+ ++ GY  + +
Sbjct: 259 MVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGK 318

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           ++ A  +++EM  + C+PD +SY   +  L                       +  GR E
Sbjct: 319 VEKAFAVMEEMADRDCAPDTISYTMFIEAL-----------------------YSIGRRE 355

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA+++   M + GC PD+ TY  +++ FC+ G +  A  +L+ M     KPN   YT  +
Sbjct: 356 EAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIM 415

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV--KKG 439
           +G   + +  EA E+     ++   P+ +TY+ V++ L +  K+ EA +++REM   K+ 
Sbjct: 416 DGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEE 475

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P+ V  +++I  L + G  + A   + E ++ G   +   +TSLI+     G +  A+
Sbjct: 476 LEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAM 535

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            LL++M      PD  TY T++  L ++  V+ A +L+ +M+  G  P   T++ V
Sbjct: 536 ELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTFKAV 590



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 179/367 (48%), Gaps = 15/367 (4%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y+ D I Y  +++ LSK      A++++ LM  RG      A++ ++    + G+++ A+
Sbjct: 229 YKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAV 288

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             +  M++  + P +   +  +   +   K+ KA   +E M      P+ ++Y   I+  
Sbjct: 289 KTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEAL 348

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI---KEVRDLMEKMVNDSNL 313
             + R ++A K+ + M  KGC PD  +Y  ++   CKE  +     V  LM+K     N 
Sbjct: 349 YSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNR 408

Query: 314 ---------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                    F    R+EEA EL  ++ + G +P  VTY  V+N  C++ ++D+A ++L++
Sbjct: 409 YIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLRE 468

Query: 365 MYHHG--CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           M       +P+ V+Y+  ++GL   G    A +++    +    P+  TY+ ++  L   
Sbjct: 469 MQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGA 528

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           GK+S A +++ EM+K G FP       L+Q LCR   +D A   +QE +  G   N   F
Sbjct: 529 GKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTF 587

Query: 483 TSLIRGF 489
            ++ +GF
Sbjct: 588 KAVEKGF 594



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 132/280 (47%), Gaps = 5/280 (1%)

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
           ++    T + ++  L R G LS+A    +  + +   P     N+L++        +   
Sbjct: 92  FSHTLFTRNSLLLALVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVN 148

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             ++E  ++G   N      ++   C + DL++A+S  + +   K +P   TYT ++D L
Sbjct: 149 ALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGL 208

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA 584
            K  +VE A ++  +M+ KG  P ++ Y ++I    + GRV++  KL++ M+++    TA
Sbjct: 209 CKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTA 268

Query: 585 --YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             Y  ++  LC  G ++EA K + ++ R   +    T   +V  Y+  G    A+ V   
Sbjct: 269 VAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEE 328

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           M +R+  PD        E L   G+ EEA+ +    VE+G
Sbjct: 329 MADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKG 368


>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Cucumis sativus]
 gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Cucumis sativus]
          Length = 504

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 243/472 (51%), Gaps = 31/472 (6%)

Query: 114 VLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIE 173
           +++++ D + AL  F     Q  + H+   Y  +++ L+K K  Q    VL  M     +
Sbjct: 56  LIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCK 115

Query: 174 CRPEAFSYLMVAYSRAG---KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK--LA 228
                F  LM  +S++    ++ +  Y +  + +    P+L   +T +++LV  ++  LA
Sbjct: 116 VHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREK--PSLKAISTCLNLLVESDRVDLA 173

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS-PDKVSYYTV 287
           + L    R +L  + PN   +N L+K +C    ++ A +++ EM     S P+ V+Y T+
Sbjct: 174 RKLLVNARSKL-NLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTL 232

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +G LC+  ++KE  +  E+MV+  N+                      +PD +TY  ++N
Sbjct: 233 IGGLCENGKLKEAIEFFEEMVSKDNI----------------------LPDALTYNILIN 270

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           GFC+ G++D+A+ +L+ M  +GC PN  +Y+  +NG C  G+  EA+E+ N  +     P
Sbjct: 271 GFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKP 330

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           + I+Y+ +++ L R G++ EA +++++M  K      V  N+++  LCREG+ D A   +
Sbjct: 331 DTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMV 390

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
           Q+   +G  +N  ++  ++    QKG+L +A  LL  M      P   T  T++  L  N
Sbjct: 391 QKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNN 450

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           G V++A E ++ +L  G  P   ++ T++   C+  ++  + +LL+ +++++
Sbjct: 451 GMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFELLDVLVTQE 502



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 209/444 (47%), Gaps = 32/444 (7%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LIK   D     D   ++ E   +G + +  +Y +++  L K K+ + +  ++ +M  D+
Sbjct: 56  LIKNERDPQHALDIFNMVSEQ--QGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDT 113

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
              H+                 G   +++ + +  +   RV ++  A K + +      K
Sbjct: 114 CKVHE-----------------GIFLNLMKHFSKSSMHERVLDMFYAIKSIVRE-----K 151

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREM-INTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           P+  + +  LN L  + +   AR++ +N   +    PN   +++++    R G L  A +
Sbjct: 152 PSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFE 211

Query: 431 VVREM-VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV-NVVNFTSLIRG 488
           VV+EM   +  +P  V  + LI  LC  GK+  A +F +E ++K   + + + +  LI G
Sbjct: 212 VVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILING 271

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           FCQ+G ++ A ++L+ M      P+   Y+ +++   K GR++EA E+  ++ S G+ P 
Sbjct: 272 FCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPD 331

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKIL 605
            ++Y T+I+  C+ GRV++  +LL++M  K  CR     +N ++  LC  G  +EA  ++
Sbjct: 332 TISYTTLINCLCRTGRVDEATELLQQMKDKD-CRADTVTFNVMLGGLCREGRFDEALDMV 390

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            K+       +  +  +++     KG    A ++   M NR  +P       +   L   
Sbjct: 391 QKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNN 450

Query: 666 GKSEEADTLMLRFVERGHIQPKSE 689
           G  ++A   +L  +E G  +P+ E
Sbjct: 451 GMVKDAVESLLGLLEMG-FKPEHE 473



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 169/353 (47%), Gaps = 17/353 (4%)

Query: 105 SLKPRQICAVLRSQADE-RVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
           SLK    C  L  ++D   +A +    A  +   R +  ++ ++++   +    Q A  V
Sbjct: 153 SLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEV 212

Query: 164 LRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAM-YVLSMMQKAAVAPNLLICNTAIHV 220
           ++ M    +   P   +Y  L+      GKL+ A+ +   M+ K  + P+ L  N  I+ 
Sbjct: 213 VKEMKSARVS-YPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILING 271

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
                K+ +A   LE M+  G +PNV  Y+ L+ GYC   R+++A ++ +E+   G  PD
Sbjct: 272 FCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPD 331

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFH-------DQGRIEEAKELVN 328
            +SY T++  LC+  R+ E  +L+++M +     D+  F+        +GR +EA ++V 
Sbjct: 332 TISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQ 391

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           ++   G   +  +Y  V+N   + GEL +A ++L  M + G  P+  +    L  LC+NG
Sbjct: 392 KLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNG 451

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
              +A E +    E  + P   ++  ++  + RE K+    +++  +V + + 
Sbjct: 452 MVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFELLDVLVTQEYL 504


>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 536

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 213/430 (49%), Gaps = 15/430 (3%)

Query: 120 DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAF 179
           +  +  +F+ ++  +   RH    Y ++   L K  +   A ++   M   GI       
Sbjct: 82  NPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLL 141

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
            +L+ +++  GKL  A  +L  +Q   V    ++ N+ ++ LV  +++  A++  E    
Sbjct: 142 GFLVSSFAEKGKLHCATALL--LQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLR 199

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
                +  T+N LI+G C + + + A++L+  M   GC PD V+Y T++   CK   +K+
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKK 259

Query: 300 VRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
             ++ + + + S    D              G+++EA  L++ M ++G  P  VT+  +V
Sbjct: 260 ANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLV 319

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G+ + GE+  A+++  +M   GC P+ V++T+ ++G C  G+  +   +          
Sbjct: 320 DGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMF 379

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PNA TYS++++ L +E +L +A +++ ++  K   P P   N +I   C+ GK++ A   
Sbjct: 380 PNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVI 439

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           ++E   K C  + + FT LI G C KG + EA+S+   M      PD +T ++++  L K
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499

Query: 527 NGRVEEATEL 536
            G  +EA  L
Sbjct: 500 AGMAKEAYHL 509



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 211/426 (49%), Gaps = 18/426 (4%)

Query: 230 ALRFLE--RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD-KVSYYT 286
             RF E  R +L  I  +  TYN L +  C       A ++ + M   G SP+ ++  + 
Sbjct: 86  GFRFWEFSRFKL-NIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFL 144

Query: 287 VMGYLCKEKRIKEVRDLMEK-------MVNDS--NLFHDQGRIEEAKELVNQMSQMGCIP 337
           V  +  K K       L++        MV +S  N      R+E+A +L  +  +     
Sbjct: 145 VSSFAEKGKLHCATALLLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCN 204

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           D  T+  ++ G C VG+ ++A ++L  M   GC P+ V+Y   + G C + +  +A EM 
Sbjct: 205 DTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMF 264

Query: 398 N-TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +        +P+ +TY+ ++ G  + GK+ EA  ++ +M++ G +PT V  N+L+    +
Sbjct: 265 DDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAK 324

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            G+M  A++   + ++ GC  +VV FTSLI G+C+ G + +   L ++M      P+  T
Sbjct: 325 AGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFT 384

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y+ +I+AL K  R+ +A EL+ ++ SK ++P    Y  VI  +C+ G+V + + ++E+M 
Sbjct: 385 YSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEM- 443

Query: 577 SKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
            K+KC   +  +  +I   C  G + EA  I  K++      D  T   L+   L  G+ 
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA 503

Query: 634 LLAYKV 639
             AY +
Sbjct: 504 KEAYHL 509



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 14/256 (5%)

Query: 402 EEWWTPNAITYSVVMHGLRR-EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
             +WT N +T S+   G+    G++ E       M   G  P    +  L+ S   +GK+
Sbjct: 101 HSFWTYNLLTRSLCKAGMHDLAGQMFEC------MKSDGISPNSRLLGFLVSSFAEKGKL 154

Query: 461 DGAKKFMQECLN-KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
             A   + +    +GC + VVN  SL+    +   +E+A+ L ++    +   DT T+  
Sbjct: 155 HCATALLLQSYEVEGCCM-VVN--SLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNI 211

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
           +I  L   G+ E+A EL+  M   G +P +VTY T+I  +C+   ++   ++ + + S  
Sbjct: 212 LIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSS 271

Query: 580 KCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
            C      Y  +I   C  G ++EA  +L  +LR        T +VLV+ Y   G    A
Sbjct: 272 GCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTA 331

Query: 637 YKVACRMFNRNLIPDL 652
            ++  +M +    PD+
Sbjct: 332 EEIRGKMISFGCFPDV 347



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 13/242 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  M+    K    Q A  +L  M R GI      F+ L+  Y++AG++  A  + 
Sbjct: 276 DVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIR 335

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M      P+++   + I       ++ +  R  E M   G+ PN  TY+ LI   C  
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKE 395

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLF 314
           +R+  A +L+ ++  K   P    Y  V+   CK  ++ E   ++E+M       D   F
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITF 455

Query: 315 HD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +GR+ EA  + ++M  +GC PD +T +++++   + G   +A   L Q+ H
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIAH 514

Query: 368 HG 369
            G
Sbjct: 515 KG 516


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 157/628 (25%), Positives = 274/628 (43%), Gaps = 100/628 (15%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP---------------EAFS--YLMVA 185
           +Y M + IL + ++   A  VLR +A  G  C                   FS   L+ A
Sbjct: 110 IYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPTNLFSVDLLVNA 169

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK------------------- 226
           Y + GK+ +A   +  M +     +L  CN  ++ LV  NK                   
Sbjct: 170 YVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLD 229

Query: 227 ----------------LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
                           L+KA   L++M+   + PN +TYN ++  Y    R K A++++D
Sbjct: 230 VTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILD 288

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-------------FHDQ 317
           +M   G   D  +Y  ++  LCK KR      L+++M  + NL             F  +
Sbjct: 289 DMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRM-REVNLTPDECSYNTLIHGFFGE 347

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG--------------------ELDQ 357
           G+I  A  + NQM +    P V TYTA+++G+CR G                    E+ +
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSK 407

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           AK++L+ M   G  P+ ++Y+A +N     G   EA +          + +  +++ ++ 
Sbjct: 408 AKQILKCMLADGIDPDVITYSALIN----EGMIAEAEQFKQYMSRMKISFDVASFNCIID 463

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
              + G + EA  V   MV+ G+ P       L++ LC+ G +  AK+FM   L K CA+
Sbjct: 464 SYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAI 523

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +     +L+ G C+ G L+EAL L + M      PDT TYT ++D   K G+V  A  L+
Sbjct: 524 DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILL 583

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCS 594
             ML KGLVP  + Y  +++     G+V+    + ++++ K+       AYN ++     
Sbjct: 584 QMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLK 643

Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
            G + E  +++  +        +++ ++L+  Y+ KG       +   M    + PD   
Sbjct: 644 GGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPD--- 700

Query: 655 CKKVSERLILEGKSEEADT-LMLRFVER 681
              V+ RL++ G  E     + ++F+E+
Sbjct: 701 --NVTYRLLIFGLCEYGLIEIAVKFLEK 726



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/559 (24%), Positives = 261/559 (46%), Gaps = 17/559 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y  +L    K   C+ A R+L  M + GIE     ++ ++    +  +   A  +L
Sbjct: 263 NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLL 322

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++  + P+    NT IH      K+  A+    +M    + P+V TY  LI GYC  
Sbjct: 323 KRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRN 382

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE--VRDLMEKMVNDSNLFHDQ 317
            R  +A +++ EM + G  P +VS         K K+I +  + D ++  V   +   ++
Sbjct: 383 GRTDEARRVLYEMQITGVRPREVS---------KAKQILKCMLADGIDPDVITYSALINE 433

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G I EA++    MS+M    DV ++  +++ +C+ G + +A  +   M  HG  P+  +Y
Sbjct: 434 GMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTY 493

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
            + L GLC  G  ++A+E +    E+    +  T + ++ G+ + G L EA D+  +MV 
Sbjct: 494 GSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 553

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
           +   P      +L+   C+ GK+  A   +Q  L KG   + + +T L+ G   +G ++ 
Sbjct: 554 RNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKA 613

Query: 498 ALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           A  +  ++ +CK+    D + Y ++++   K G++ E   LM  M    + P+  +Y  +
Sbjct: 614 ASYMFQEI-ICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNIL 672

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +H Y + G++   L L   M+ +  +     Y  +I  LC +G +E A K L K++    
Sbjct: 673 MHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGV 732

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             D     +L++++  K     A ++   M   ++ P  K    +   LI +   +++  
Sbjct: 733 FPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYE 792

Query: 674 LMLRFVERGHIQPKSEEHL 692
           ++   VE G +QPK   ++
Sbjct: 793 ILHDMVESG-LQPKHTHYI 810



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 151/637 (23%), Positives = 272/637 (42%), Gaps = 107/637 (16%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAP-------NLL 212
           A  +   M R+ ++     ++ L+  Y R G+   A  VL  MQ   V P        +L
Sbjct: 353 AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQIL 412

Query: 213 ICNTA---------IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
            C  A            L+    +A+A +F + M    I+ +V ++NC+I  YC    + 
Sbjct: 413 KCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVL 472

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ------ 317
           +A  + D M   G  PD  +Y +++  LC+   + + ++ M  ++  +    ++      
Sbjct: 473 EAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLL 532

Query: 318 ------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                 G ++EA +L  +M     +PD  TYT +++GFC+ G++  A  +LQ M   G  
Sbjct: 533 VGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLV 592

Query: 372 PNTVSYTAFLNGLCHNGKSLEA-------------------------------------R 394
           P+T++YT  LNGL + G+   A                                     R
Sbjct: 593 PDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIER 652

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            M N  E E + P++ +Y+++MHG  ++G+LS    + R+MVK+G  P  V   LLI  L
Sbjct: 653 LMRNMHENEVY-PSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGL 711

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C  G ++ A KF+++ + +G   + + F  LI+ F +K  +  AL L   M      P +
Sbjct: 712 CEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSS 771

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
            TY  +++ L +   ++++ E++  M+  GL P    Y  +I+  C+VG ++   +L E 
Sbjct: 772 KTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKED 831

Query: 575 M--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS------------------- 613
           M  L       A + ++  LC  G +EEA  +   ++R                      
Sbjct: 832 MKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFK 891

Query: 614 ----------------KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKK 657
                           K D  T +VL+    NK     A  +   M ++ L+P++     
Sbjct: 892 IDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYIT 951

Query: 658 VSERLILEGKSEEADTLMLRFVERGHI----QPKSEE 690
           ++  +   G  ++ + L+    +RG +     P+S E
Sbjct: 952 LTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESLE 988



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 215/473 (45%), Gaps = 20/473 (4%)

Query: 156 LCQG-----AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           LCQG     AK  +  +  +      +  + L+V   + G L  A+ +   M    + P+
Sbjct: 500 LCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPD 559

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
                  +       K+  AL  L+ M   G+ P+ + Y CL+ G  +  ++K A  +  
Sbjct: 560 TYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQ 619

Query: 271 EMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHD---Q 317
           E+  K G   D ++Y ++M    K  +I E+  LM  M          + + L H    +
Sbjct: 620 EIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKK 679

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G++     L   M + G  PD VTY  ++ G C  G ++ A K L++M   G  P+ +++
Sbjct: 680 GQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAF 739

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              +       K   A ++ +  +    +P++ TY  +++GL R+  L ++ +++ +MV+
Sbjct: 740 DILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVE 799

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G  P       LI + CR G +DGA +  ++    G   + V  +S++RG C+ G +EE
Sbjct: 800 SGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEE 859

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A+ +   +      P   T+TT++  L K  ++++A  L   M S GL   VVTY  +I 
Sbjct: 860 AIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLIT 919

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKV 608
             C    + D L L E+M SK      T Y  +   + + G +++  K+L  +
Sbjct: 920 GLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDI 972



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 192/413 (46%), Gaps = 30/413 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLR-LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
           D I Y  +L  L      + A  + + ++ + G+     A++ +M  Y + G++     +
Sbjct: 594 DTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERL 653

Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
           +  M +  V P+    N  +H  +   +L++ L     M   GI P+ +TY  LI G C+
Sbjct: 654 MRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCE 713

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
              I+ A+K +++M L+G  PD +++                 D++ K       F ++ 
Sbjct: 714 YGLIEIAVKFLEKMVLEGVFPDNLAF-----------------DILIKA------FSEKS 750

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           ++  A +L + M  +   P   TY A+VNG  R   L Q+ ++L  M   G +P    Y 
Sbjct: 751 KMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYI 810

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           A +N  C  G    A E+    +     P+ +  S ++ GL + GK+ EA  V   +++ 
Sbjct: 811 ALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRA 870

Query: 439 GFFPTPVEINLLIQSLCREGKMDGA---KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           G  PT      L+  LC+E K+D A   K+ M+ C   G  V+VV +  LI G C K  +
Sbjct: 871 GMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESC---GLKVDVVTYNVLITGLCNKKCI 927

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            +AL L ++M      P+  TY T+  A+   G +++  +L+  +  +G+VP+
Sbjct: 928 CDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 980



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 114/530 (21%), Positives = 225/530 (42%), Gaps = 62/530 (11%)

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT---------------- 243
           S++Q++ +     I   A+H+LV     ++A+  L  + L G +                
Sbjct: 97  SIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCD 156

Query: 244 -PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
             N+ + + L+  Y    ++ DA   I  M   G      S   ++  L    + + V  
Sbjct: 157 PTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWL 216

Query: 303 LMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGC-IPDVVTYTAVVNGF 349
            +++ ++              N    QG++ +A+ ++ +M    C +P+ VTY  ++N +
Sbjct: 217 FLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKN--CRLPNAVTYNTILNWY 274

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
            + G    A ++L  M  +G + +  +Y   ++ LC   +S  A  ++    E   TP+ 
Sbjct: 275 VKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDE 334

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            +Y+ ++HG   EGK++ A  +  +M+++   P+      LI   CR G+ D A++ + E
Sbjct: 335 CSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYE 394

Query: 470 --------------------CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
                                L  G   +V+ +++LI     +G + EA      M   K
Sbjct: 395 MQITGVRPREVSKAKQILKCMLADGIDPDVITYSALI----NEGMIAEAEQFKQYMSRMK 450

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV---- 565
              D  ++  IID+  + G V EA  +   M+  G  P + TY +++   CQ G +    
Sbjct: 451 ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 510

Query: 566 EDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
           E ++ LLEK  +  +     N ++  +C  G L+EA  +  K++      D  T  +L++
Sbjct: 511 EFMVYLLEKACAIDE--KTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLD 568

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
            +  +G  + A  +   M  + L+PD      +   L+ EG+ + A  + 
Sbjct: 569 GFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMF 618


>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37230-like [Cucumis sativus]
          Length = 760

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 148/651 (22%), Positives = 284/651 (43%), Gaps = 61/651 (9%)

Query: 81  VCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHD 140
           +C+++  R  W+ +L+  +R+L+       +  VL +      AL FF W +R   ++HD
Sbjct: 95  ICKMMANRE-WTTRLQNSIRSLVPQFDHNLVYNVLHAAKKSEHALNFFRWVERAGLFQHD 153

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
              ++ ++EIL +      A+ +L  M  +G++   + F  L+ +Y +AG ++ A+ +  
Sbjct: 154 RETHFKIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQ 213

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M++  V  ++   +     ++   +   A R+   M   GI P   TYN ++ G+    
Sbjct: 214 KMKELGVERSVKSYDALFKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSL 273

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------- 311
           R++ A +  ++M  +G SPD V+Y T++   C+ K ++E      +M   +         
Sbjct: 274 RLETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYT 333

Query: 312 ---NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY-- 366
                +    R ++A  L  +M   G  P+ +TY+ ++ G C   +L +A+K+L +M   
Sbjct: 334 TMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTR 393

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
           H   K N++ +   L+  C +G    A  ++           A  Y +++    + G   
Sbjct: 394 HFAPKDNSI-FMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYD 452

Query: 427 EACDVVREMVKKGFFPTPVEI--------NLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           +A  ++  +V+K     P           NL+IQ LC  G+   A  F ++ L KG   +
Sbjct: 453 QAVKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQ-D 511

Query: 479 VVNFTSLIRG-----------------------------------FCQKGDLEEALSLLD 503
            V F +LIRG                                   +  KG+  +A + LD
Sbjct: 512 EVAFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALD 571

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
            M      PD+  + +++++L  +GRV+ A+ +M  ML KG+   +     ++      G
Sbjct: 572 SMIENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFMRG 631

Query: 564 RVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
             E+ L  +  +L    C   +N ++  LC  G    A K+L   L      + S+   +
Sbjct: 632 HDEEALGRI-NLLMNCNCPPDFNSLLSVLCEKGKTTSAFKLLDFGLERECNIEFSSYEKV 690

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
           +++ L  G  L AY + C++  +    D   C  + + L  EG +++AD L
Sbjct: 691 LDALLGAGKTLNAYAILCKIMEKGGAKDWSSCDDLIKSLNQEGNTKQADIL 741



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 208/492 (42%), Gaps = 25/492 (5%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGI-TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           N   +VL    K   AL F   ++ AG+   +  T+  +I+      ++  A  ++ +MP
Sbjct: 122 NLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHFKIIEILGRASKLNHARCILLDMP 181

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFHD--------QGRIE 321
            KG   D+  +  ++    K   ++E   + +KM    V  S   +D        +GR  
Sbjct: 182 NKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGRYM 241

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            AK   N M   G  P   TY  ++ GF     L+ AK+  + M   G  P+ V+Y   +
Sbjct: 242 MAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMI 301

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           NG C      EA +     + +   P  I+Y+ ++ G     +  +A  +  EM   G  
Sbjct: 302 NGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGEK 361

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV--NVVNFTSLIRGFCQKGDLEEAL 499
           P  +  + L+  LC   K+  A+K + E + +  A   N + F  L+   C+ GDL+ A+
Sbjct: 362 PNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSI-FMRLLSCQCKHGDLDAAM 420

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV--PTVV------T 551
            +L  M       +   Y  +I+   K G  ++A +L+  ++ K ++  P          
Sbjct: 421 HVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEASA 480

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQ-KCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           Y  +I   C  G+         ++L K  +   A+N +I      G  + A ++L  + R
Sbjct: 481 YNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRGHAKEGNPDLAFEMLKIMGR 540

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                DA +  +L++SYL+KG P  A      M      PD  L + V E L  +G+ + 
Sbjct: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQT 600

Query: 671 ADTLMLRFVERG 682
           A  +M   +++G
Sbjct: 601 ASRVMNSMLDKG 612


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/595 (24%), Positives = 264/595 (44%), Gaps = 64/595 (10%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAM-YVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
           + ++G       F+ L+       +  +AM  VL  M + +  P++  C   +  L   N
Sbjct: 113 VVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDEN 172

Query: 226 KLAKALRFLERM---QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
           +  +AL     M   +  G  P+V++Y  +I G+        A     EM  +  SPD V
Sbjct: 173 RSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVV 232

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVND---------SNLFHDQGRIEEAKELVNQMSQM 333
           +Y +++  LCK + + +  +++  MV +         +++ H      + KE +  + ++
Sbjct: 233 TYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKV 292

Query: 334 --------GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
                   G  PD+ TY  ++ G+   G L     +L  M  +G  P+   Y   +    
Sbjct: 293 RSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYA 352

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             GK  EA  + +   ++   P+A+TY  V+  L + G++ +A     +M+ +G  P  +
Sbjct: 353 KQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 412

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N LI  LC   K + A++ + E L++G  +N + F S+I   C++G + E+  L D M
Sbjct: 413 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 472

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 PD +TY+T+ID     G+++EA +L+  M+S GL P  VTYRT+I+ YC++ R+
Sbjct: 473 VRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRM 532

Query: 566 EDLLKLLEKMLSK-----------------QKCRTA--------------------YNQV 588
            D L L ++M S                  Q  RTA                    YN +
Sbjct: 533 GDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 592

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           +  LC     ++A ++   +     K +A T ++++++ L  G    A  +     +  L
Sbjct: 593 LHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGL 652

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRF------VERGHIQPKSEEHLQRQRV 697
           +P+    + ++E +I +G  EE D L L        V+ G +     E LQR  +
Sbjct: 653 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 707



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 237/510 (46%), Gaps = 21/510 (4%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R   D + Y  ++  L K +    A  VL  M + G+      ++ +M  Y  +G+ + A
Sbjct: 226 RISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEA 285

Query: 196 MYVLSMMQKAAVAPNLLICNTAIH-VLVVGNKLAKAL----RFLERMQLAGITPNVLTYN 250
           +  L  ++   V P+ L  + A +  L+ G     AL      L+ M   GI P+   YN
Sbjct: 286 IGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYN 345

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI  Y    ++ +A+ +  +M  +G +PD V+Y  V+G LCK  R+++     E+M+++
Sbjct: 346 ILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 405

Query: 311 S----NLFHDQ--------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                N+ ++          + E A+EL+ +M   G   + + + ++++  C+ G + ++
Sbjct: 406 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 465

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
           +K+   M   G KP+ ++Y+  ++G C  GK  EA ++++        PN +TY  +++G
Sbjct: 466 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLING 525

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
             +  ++ +A  + +EM   G  P  +  N+++Q L +  +   AK+        G  + 
Sbjct: 526 YCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 585

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +  +  ++ G C+    ++AL +  ++ L     +  T+  +IDAL K GR  EA +L +
Sbjct: 586 LSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFV 645

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSF 595
              S GLVP   TYR +       G +E+L +L   M     C       N ++  L   
Sbjct: 646 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM-EDNGCTVDSGMLNFIVRELLQR 704

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVE 625
           G +  AG  L  +       +AST  + ++
Sbjct: 705 GEITRAGTYLSMIDEKHFSLEASTASLFID 734



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 228/489 (46%), Gaps = 35/489 (7%)

Query: 228 AKALRFLERMQLAG---ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           A A+    RM  AG   +TP V TY  LI   C   R+      +  +  KG   + +++
Sbjct: 66  AAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITF 125

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVND----SNLFH---------DQGRIEEAKELVNQMS 331
             ++  LC +KR  +  D++ + + +     ++F          D+ R +EA EL + M+
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMA 185

Query: 332 Q---MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
                G  PDVV+YT V+NGF + G+  +A     +M      P+ V+Y++ +  LC   
Sbjct: 186 DGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQ 245

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              +A E++ +  +    PN  TY+ +MHG    G+  EA   ++++   G  P  +E +
Sbjct: 246 AMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPD 305

Query: 449 L-----LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
           +     L+Q    +G + G    +   +  G   +   +  LI  + ++G ++EA+ +  
Sbjct: 306 IATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFS 365

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
            M     +PD VTY  +I  L K+GRVE+A     +M+ +GL P  + Y ++IH  C   
Sbjct: 366 KMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 425

Query: 564 RVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           + E   +L+ +ML +  C     +N +I++ C  G + E+ K+   ++R   K D  T  
Sbjct: 426 KWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 485

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK---SEEADTLML-R 677
            L++ Y   G    A K+   M +  L P+      V+ R ++ G    S   D L+L +
Sbjct: 486 TLIDGYCLAGKMDEAMKLLSGMVSVGLKPN-----TVTYRTLINGYCKISRMGDALVLFK 540

Query: 678 FVERGHIQP 686
            +E   + P
Sbjct: 541 EMESSGVSP 549



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 102/463 (22%), Positives = 189/463 (40%), Gaps = 71/463 (15%)

Query: 112 CAVLRSQADERVALQFFYWADRQWR--YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR 169
           C +L+  A +   +      D   R     D  VY +++   +K      A  V   M +
Sbjct: 310 CTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQ 369

Query: 170 RGIECRPEAFSYLMVA--YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           +G+   P+A +Y  V     ++G++ +AM     M    ++P  ++ N+ IH L   NK 
Sbjct: 370 QGLN--PDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 427

Query: 228 AKA----LRFLER-------------------------------MQLAGITPNVLTYNCL 252
            +A    L  L+R                               M   G+ P+++TY+ L
Sbjct: 428 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 487

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I GYC   ++ +A+KL+  M   G  P+ V+Y T++   CK  R+               
Sbjct: 488 IDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMG-------------- 533

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                    +A  L  +M   G  PD++TY  ++ G  +      AK++  ++   G + 
Sbjct: 534 ---------DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 584

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
              +Y   L+GLC N  + +A  M            A T+++++  L + G+  EA D+ 
Sbjct: 585 ELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLF 644

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
                 G  P      L+ +++  +G ++   +      + GC V+      ++R   Q+
Sbjct: 645 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 704

Query: 493 GDLEEA---LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
           G++  A   LS++D+ +      +  T +  ID LS  G+ +E
Sbjct: 705 GEITRAGTYLSMIDEKHF---SLEASTASLFIDLLS-GGKYQE 743


>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g37230-like [Cucumis sativus]
          Length = 760

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 148/651 (22%), Positives = 284/651 (43%), Gaps = 61/651 (9%)

Query: 81  VCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHD 140
           +C+++  R  W+ +L+  +R+L+       +  VL +      AL FF W +R   ++HD
Sbjct: 95  ICKMMANRE-WTTRLQNSIRSLVPQFDHNLVYNVLHAAKKSEHALNFFRWVERAGLFQHD 153

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
              ++ ++EIL +      A+ +L  M  +G++   + F  L+ +Y +AG ++ A+ +  
Sbjct: 154 RETHFKIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQ 213

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M++  V  ++   +     ++   +   A R+   M   GI P   TYN ++ G+    
Sbjct: 214 KMKELGVERSVKSYDALFKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSL 273

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------- 311
           R++ A +  ++M  +G SPD V+Y T++   C+ K ++E      +M   +         
Sbjct: 274 RLETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYT 333

Query: 312 ---NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY-- 366
                +    R ++A  L  +M   G  P+ +TY+ ++ G C   +L +A+K+L +M   
Sbjct: 334 TMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTR 393

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
           H   K N++ +   L+  C +G    A  ++           A  Y +++    + G   
Sbjct: 394 HFAPKDNSI-FMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYD 452

Query: 427 EACDVVREMVKKGFFPTPVEI--------NLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           +A  ++  +V+K     P           NL+IQ LC  G+   A  F ++ L KG   +
Sbjct: 453 QAVKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQ-D 511

Query: 479 VVNFTSLIRG-----------------------------------FCQKGDLEEALSLLD 503
            V F +LIRG                                   +  KG+  +A + LD
Sbjct: 512 EVAFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALD 571

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
            M      PD+  + +++++L  +GRV+ A+ +M  ML KG+   +     ++      G
Sbjct: 572 SMIENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFMRG 631

Query: 564 RVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
             E+ L  +  +L    C   +N ++  LC  G    A K+L   L      + S+   +
Sbjct: 632 HDEEALGRI-NLLMNCNCPPDFNSLLSVLCEKGKTTSAFKLLDFGLERECNIEFSSYEKV 690

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
           +++ L  G  L AY + C++  +    D   C  + + L  EG +++AD L
Sbjct: 691 LDALLGAGKTLNAYAILCKIMEKGGAKDWSSCDDLIKSLNQEGNTKQADIL 741



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 208/492 (42%), Gaps = 25/492 (5%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGI-TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           N   +VL    K   AL F   ++ AG+   +  T+  +I+      ++  A  ++ +MP
Sbjct: 122 NLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHFKIIEILGRASKLNHARCILLDMP 181

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFHD--------QGRIE 321
            KG   D+  +  ++    K   ++E   + +KM    V  S   +D        +GR  
Sbjct: 182 NKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGRYM 241

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            AK   N M   G  P   TY  ++ GF     L+ AK+  + M   G  P+ V+Y   +
Sbjct: 242 MAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMI 301

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           NG C      EA +     + +   P  I+Y+ ++ G     +  +A  +  EM   G  
Sbjct: 302 NGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGEK 361

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV--NVVNFTSLIRGFCQKGDLEEAL 499
           P  +  + L+  LC   K+  A+K + E + +  A   N + F  L+   C+ GDL+ A+
Sbjct: 362 PNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSI-FMRLLSCQCKHGDLDAAM 420

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV--PTVV------T 551
            +L  M       +   Y  +I+   K G  ++A +L+  ++ K ++  P          
Sbjct: 421 HVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEMEASA 480

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQ-KCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           Y  +I   C  G+         ++L K  +   A+N +I      G  + A ++L  + R
Sbjct: 481 YNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRGHAKEGNPDLAFEMLKIMGR 540

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                DA +  +L++SYL+KG P  A      M      PD  L + V E L  +G+ + 
Sbjct: 541 RGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQT 600

Query: 671 ADTLMLRFVERG 682
           A  +M   +++G
Sbjct: 601 ASRVMNSMLDKG 612


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 143/591 (24%), Positives = 268/591 (45%), Gaps = 68/591 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY-- 197
           +P V+ +++ +  + ++   A +   LM  RG+   P  ++  MV  S   + +  M+  
Sbjct: 104 NPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLN--PSVYTCNMVLGSLVKEQKVDMFWS 161

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
               M    + P++   N  ++ L    K   A   L +M+ +G+ P  +TYN L+  YC
Sbjct: 162 FFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYC 221

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------V 308
              R K A +LID M  KG   D  +Y   +  LC++ R  +   L+++M         +
Sbjct: 222 KKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEI 281

Query: 309 NDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
             + L   F  +G+IE A ++ ++MS    +P+ +TY  ++ G C  G + +A +++  M
Sbjct: 282 TYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVM 341

Query: 366 YHHGCKPNTV-----------------------------------SYTAFLNGLCHNGKS 390
             HG +PN V                                   SYTA ++GLC NG  
Sbjct: 342 VSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGML 401

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA ++++   +    P+ +T+SV+++G  R GK++ A +++ +M K G  P  +  + L
Sbjct: 402 EEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTL 461

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVN-----VVNFTS--LIRGFCQKGDLEEALSLLD 503
           I + C+ G       +++E LN    +N       +FT   L+  FC+ G LEEA   ++
Sbjct: 462 IYNYCKMG-------YLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMN 514

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
            M     DP++VT+  II+    +G   +A  +  KM S G  P++ TY  ++   C  G
Sbjct: 515 HMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGG 574

Query: 564 RVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
            + + LK   ++  +        +N  + + C  G L +A  ++ +++      D  T  
Sbjct: 575 HINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYT 634

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLI-PDLKLCKKVSERLILEGKSEEA 671
            L+     KG  + A  ++ +   + L+ P+  +   + + L+  G +  A
Sbjct: 635 NLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAA 685



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 123/514 (23%), Positives = 218/514 (42%), Gaps = 46/514 (8%)

Query: 122 RVALQFFYWADRQWRYRHDPIVYYM--MLEILSKTKLCQGAKRVLRLMARRGIECRPEAF 179
           R+AL+F  W  +Q     + + + +     IL + ++   AK  L+ + +  I      F
Sbjct: 33  RLALKFLNWVIKQPNLELNHVTHIICTTTHILVRARMYNFAKTTLKHLLQLPIGLN-SVF 91

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
             LM  Y                       N  + +  I V +    +  A++    M  
Sbjct: 92  GALMETYPICNS------------------NPAVFDLLIRVCLRNRMVGDAVQTFYLMGF 133

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
            G+ P+V T N ++       ++         M  KG  PD  ++  ++  LC       
Sbjct: 134 RGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALC------- 186

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                           ++G+ + A  L+ +M + G  P  VTY  ++N +C+ G    A 
Sbjct: 187 ----------------ERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAAS 230

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           +++  M   G   +  +Y  F++ LC + +S +   ++         PN ITY+ ++ G 
Sbjct: 231 QLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGF 290

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            REGK+  A  V  EM      P  +  N LI   C  G +  A + M   ++ G   N 
Sbjct: 291 VREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNE 350

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           V + +L+ G  +  +     S+L+ M +       ++YT +ID L KNG +EEA +L+  
Sbjct: 351 VTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDD 410

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGY 597
           ML   + P VVT+  +I+ + +VG++ +  +++ KM           Y+ +I N C  GY
Sbjct: 411 MLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGY 470

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           L+EA      +  +   AD  TC+VLV ++   G
Sbjct: 471 LKEALNAYAVMNHSGHVADHFTCNVLVATFCRYG 504



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/561 (23%), Positives = 245/561 (43%), Gaps = 33/561 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R + + Y  +L  L K         +L  M   G+     +++ ++    + G L  A+ 
Sbjct: 347 RPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQ 406

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L  M K +V P+++  +  I+      K+  A   + +M   G+ PN + Y+ LI  YC
Sbjct: 407 LLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYC 466

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
            +  +K+A+     M   G   D  +   ++   C+                        
Sbjct: 467 KMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCR-----------------------Y 503

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G++EEA+  +N MS+MG  P+ VT+  ++NG+   G+  +A  +  +M   G  P+  +Y
Sbjct: 504 GKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTY 563

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNA---ITYSVVMHGLRREGKLSEACDVVRE 434
              L GLC  G   EA +  +        PNA   + ++  +    R G LS+A  ++ E
Sbjct: 564 GGLLKGLCIGGHINEALKFFHRLR---CIPNAVDNVIFNTKLTSTCRSGNLSDAIALINE 620

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG-CAVNVVNFTSLIRGFCQKG 493
           MV   F P       LI  LC++GK+  A     + + KG  + N   +TSL+ G  + G
Sbjct: 621 MVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHG 680

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
               AL + ++M     +PDTV +  IID  S+ G+  +  +++  M SK L   + TY 
Sbjct: 681 HARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYN 740

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            ++H Y +   +     L + M+       + +++ +I   C     + A KIL  +   
Sbjct: 741 ILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLE 800

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
               D  T ++L+  +  +     A+++  +M    +IP++     +   LI      +A
Sbjct: 801 GHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKA 860

Query: 672 DTLMLRFVERGHIQPKSEEHL 692
             ++   +E G + P +++++
Sbjct: 861 HRVLQVLLESGSV-PTNKQYI 880



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/538 (21%), Positives = 231/538 (42%), Gaps = 50/538 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + + +++    +      AK ++  M + G+      +S L+  Y + G L+ A+   
Sbjct: 419 DVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAY 478

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           ++M  +    +   CN  +       KL +A  F+  M   G+ PN +T++C+I GY + 
Sbjct: 479 AVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNS 538

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLF 314
                A  + D+M   G  P   +Y  ++  LC    I E      ++       D+ +F
Sbjct: 539 GDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIF 598

Query: 315 HDQ-------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL------------ 355
           + +       G + +A  L+N+M     +PD  TYT ++ G C+ G++            
Sbjct: 599 NTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIE 658

Query: 356 ------------------------DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
                                     A  + ++M +   +P+TV++   ++     GK+ 
Sbjct: 659 KGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTS 718

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           +  ++++T + +    N  TY++++HG  +   ++    + ++M++ GF P     + LI
Sbjct: 719 KVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLI 778

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
              C+    D A K ++    +G  ++   F  LI  FC++ ++++A  L+  M      
Sbjct: 779 LGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVI 838

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           P+  TY  + + L +     +A  ++  +L  G VPT   Y T+I+  C+VG ++  +KL
Sbjct: 839 PNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKL 898

Query: 572 LEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            ++M  L       A + ++  L +   +E A  +L  +L        +T   L+  Y
Sbjct: 899 QDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVY 956



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 176/401 (43%), Gaps = 29/401 (7%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
            +P VY  +++ L K    + A  +   M  + +E    AF+ ++  YSR GK      +L
Sbjct: 665  NPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDIL 724

Query: 200  SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            S M+   +  NL   N  +H     + +A+     + M   G  P+  +++ LI GYC  
Sbjct: 725  STMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQS 784

Query: 260  HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
                 AIK++  + L+G   D+ ++  ++   C+   +K                     
Sbjct: 785  KSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMK--------------------- 823

Query: 320  IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
              +A ELV QM+Q   IP+V TY A+ NG  R  +  +A ++LQ +   G  P    Y  
Sbjct: 824  --KAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYIT 881

Query: 380  FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
             +NG+C  G    A ++ +  +    + + +  S ++ GL    K+  A  V+  M++  
Sbjct: 882  LINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQ 941

Query: 440  FFPTPVEINLLIQSLCREGKMDGA---KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
              PT      L+   C+E  +  A   +  M+ C  K   ++VV +  LI G C  GD+E
Sbjct: 942  IIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVK---LDVVAYNVLISGLCANGDIE 998

Query: 497  EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
             A  L ++M      P+T  Y  +ID+        E+ +L+
Sbjct: 999  AAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLL 1039



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 141/598 (23%), Positives = 255/598 (42%), Gaps = 50/598 (8%)

Query: 77   LVREVCRLIELRSAWSPKLEGELRNLLR-SLKPRQIC--AVLRSQADERVALQFFYWADR 133
            LV   CR  +L  A     E  + ++ R  L P  +    ++    +   AL+ F   D+
Sbjct: 496  LVATFCRYGKLEEA-----EYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDK 550

Query: 134  QWRYRHDP--IVYYMMLEILSKTKLCQGA--KRVLRLMARRGIECRPEA-----FSYLMV 184
               + H P    Y  +L+      LC G      L+   R  + C P A     F+  + 
Sbjct: 551  MNSFGHFPSLFTYGGLLK-----GLCIGGHINEALKFFHR--LRCIPNAVDNVIFNTKLT 603

Query: 185  AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI-T 243
            +  R+G L +A+ +++ M      P+       I  L    K+  AL    +    G+ +
Sbjct: 604  STCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLS 663

Query: 244  PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
            PN   Y  L+ G       + A+ + +EM  K   PD V++  ++    ++ +  +V D+
Sbjct: 664  PNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDI 723

Query: 304  MEKM---------VNDSNLFHDQGR---IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
            +  M            + L H   +   +     L   M + G +PD  ++ +++ G+C+
Sbjct: 724  LSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQ 783

Query: 352  VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
                D A K+L+ +   G   +  ++   +   C   +  +A E++    +    PN  T
Sbjct: 784  SKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDT 843

Query: 412  YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
            Y+ + +GL R     +A  V++ +++ G  PT  +   LI  +CR G + GA K   E  
Sbjct: 844  YNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMK 903

Query: 472  NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
              G + + V  ++++RG      +E A+ +LD M   +  P   T+TT++    K   V 
Sbjct: 904  TLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVA 963

Query: 532  EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK----CRTAYNQ 587
            +A EL   M    +   VV Y  +I   C  G +E   KL E+M  KQ+      + Y  
Sbjct: 964  KALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEM--KQRDLWPNTSIYIV 1021

Query: 588  VIENLCSFGYLEEAGKILGKV-----LRTASK-ADASTCHVLVESYLNKGIPLLAYKV 639
            +I++ C+  Y  E+ K+L  +     +R   +   +S C + V  ++NK I LL  K+
Sbjct: 1022 LIDSFCAGNYQIESEKLLRDIQDRELMRLNQQFCYSSRCDIAVVLHMNK-IHLLGIKL 1078



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 8/148 (5%)

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
           +L++   +C  +P    +  +I    +N  V +A +    M  +GL P+V T   V+   
Sbjct: 93  ALMETYPICNSNP--AVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSL 150

Query: 560 CQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
            +  +V+      + ML+K  C     +N ++  LC  G  + AG +L K+  +     A
Sbjct: 151 VKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTA 210

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFN 645
            T + L+  Y  KG     YK A ++ +
Sbjct: 211 VTYNTLLNWYCKKG----RYKAASQLID 234


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/527 (23%), Positives = 241/527 (45%), Gaps = 15/527 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  M++ L +      A  +L  + R GI+     ++ LM A  ++G++  A  + 
Sbjct: 210 DVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLK 269

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  V P+++     I  L  G +  +    L+ MQ  GITPN + YN +I  +C  
Sbjct: 270 GRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRK 329

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH---- 315
               +A+KL DEM  KG     V+Y  +   LCKE  ++    ++++M+    + H    
Sbjct: 330 GHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLF 389

Query: 316 ---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                      GR++    L+ +M      P+    TA +   C+ G+ ++A ++  Q+ 
Sbjct: 390 NSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVL 449

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G   N  +  A ++GLC      EA +++          + ITY++++ G  +  K+ 
Sbjct: 450 GKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMD 509

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA  +  +M+K+GF P     N+ + + C  GK++     + +  ++G   ++V + ++I
Sbjct: 510 EAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTII 569

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
            G+C+  D+ +A   L ++      P+ V Y  +I    +NG + +A  ++  M   G+ 
Sbjct: 570 DGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQ 629

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKI 604
           PT VTY ++++  C  G VE++  +  + + K  +     Y  +I+  C  G ++EA   
Sbjct: 630 PTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMY 689

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
             ++       +  T   L+ +Y   G    A K+   M +  ++PD
Sbjct: 690 FKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPD 736



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 226/458 (49%), Gaps = 30/458 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA-GKLRNAMYVLS 200
           + Y ++ + L K    + A+++L  M   G+      F+ ++  + R  G+L   + ++ 
Sbjct: 352 VTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIR 411

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M    + PN  +    I  L    K  +A     ++   G+  NV T N LI G C  +
Sbjct: 412 EMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGN 471

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
            +K+A K++  M   G   D+++Y  ++   CK  ++                       
Sbjct: 472 NMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKM----------------------- 508

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           +EA +L + M + G  PD+ T+   ++ +C +G++++   +L QM   G KP+ V+Y   
Sbjct: 509 DEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTI 568

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++G C      +A E +    +    PNA+ Y+ ++ G  R G +S+A  ++  M   G 
Sbjct: 569 IDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGI 628

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            PTPV  N L+  +C  G ++  K    +C+ K   + V+ +T +I+GFC+ G ++EA+ 
Sbjct: 629 QPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVM 688

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
              +M+     P+ +TYTT++ A SK+G  EEA++L  +M+S G+VP  V+Y T+I  +C
Sbjct: 689 YFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFC 748

Query: 561 QVGR----VEDLLKLLEKMLSKQKCRTAYNQVIENLCS 594
           +V      VE   ++  ++L +  C  +YN  ++ + +
Sbjct: 749 EVDSLDKMVESPAEMSSQVLKQDGC--SYNAFVDGITT 784



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 208/463 (44%), Gaps = 26/463 (5%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA-GITPNVLT 248
           G L  A      +     +P++  C+  +  L  G +L  A +    M+    + P+V T
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           Y  +IK  C    I  A  ++ E+   G  P  V+Y  +M  LCK  R++E   L  +MV
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273

Query: 309 ND-------------SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                          S L   Q +  E   ++ +M   G  P+ V Y  ++   CR G  
Sbjct: 274 EGRVRPSIVTFGILISGLARGQ-QFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHC 332

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY--- 412
            +A K+  +M   G K   V+Y      LC  G+   A +++    +E      + +   
Sbjct: 333 SEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKIL----DEMLLAGMMVHCSL 388

Query: 413 --SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
             SVV   LR  G+L     ++REM+ +   P    +   IQ LC+ GK + A +   + 
Sbjct: 389 FNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQV 448

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           L KG  VNV    +LI G CQ  +++EA  +L  M     + D +TY  +I    K  ++
Sbjct: 449 LGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKM 508

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQV 588
           +EA +L   M+ +G  P + T+   +H YC +G+VE++L LL++M S+  +     Y  +
Sbjct: 509 DEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTI 568

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           I+  C    + +A + L ++++   + +A   + L+  Y   G
Sbjct: 569 IDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNG 611



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 143/353 (40%), Gaps = 34/353 (9%)

Query: 156 LCQG-----AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           LCQG     A +VL+ M   G+E     ++ ++    +A K+  A+ +   M K    P+
Sbjct: 467 LCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPD 526

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           L   N  +H      K+ + L  L++M+  G+ P+++TY  +I GYC    +  A + + 
Sbjct: 527 LFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLT 586

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQM 330
           E+   G  P+ V Y  ++G                        +   G I +A  +++ M
Sbjct: 587 ELMKNGLRPNAVIYNALIGG-----------------------YGRNGNISDAIGILDTM 623

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              G  P  VTY +++   C  G +++ K +  Q      +   + YT  + G C  GK 
Sbjct: 624 KYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKI 683

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
            EA             PN +TY+ +M    + G   EA  +  EMV  G  P  V  N L
Sbjct: 684 DEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTL 743

Query: 451 IQSLCREGKMD-----GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           I   C    +D      A+   Q     GC+ N      +   +CQK  +  A
Sbjct: 744 ISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAF-VDGITTPWCQKEAVSNA 795



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 137/299 (45%), Gaps = 39/299 (13%)

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN-KGCAVNVVN 481
           G LS A D   E+  +G  P+    ++L+++L   G++D A+K   E  + K  A +V  
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +T++I+  C+ G+++ A ++L ++      P  VTY  ++DAL K+GRVEEA  L  +M+
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273

Query: 542 SK-----------------------------------GLVPTVVTYRTVIHRYCQVGRVE 566
                                                G+ P  V Y  +I  +C+ G   
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333

Query: 567 DLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
           + LKL ++M+SK  ++    YN + + LC  G +E A KIL ++L        S  + +V
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV 393

Query: 625 ESYL-NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             +L   G   L  ++   M  R L P+  L     + L   GK EEA  +  + + +G
Sbjct: 394 AWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKG 452



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/144 (20%), Positives = 60/144 (41%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           P+ Y  ++  +    L +  K V      + IE     ++ ++  + + GK+  A+    
Sbjct: 632 PVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFK 691

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M    + PN +   T +          +A +  + M   GI P+ ++YN LI G+C++ 
Sbjct: 692 EMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVD 751

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSY 284
            +   ++   EM  +    D  SY
Sbjct: 752 SLDKMVESPAEMSSQVLKQDGCSY 775


>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
          Length = 581

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 216/460 (46%), Gaps = 26/460 (5%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           P V   ++ +L+++     A RV   M  RG+     A + L+ A +RA     A  V  
Sbjct: 108 PHVPSWLVLVLAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFD 167

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M +A +A    + N  +HV +     A+A   + RM  AG+T +  +YN +I  YC   
Sbjct: 168 EMARAGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKG 227

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
              +A+   D M  +G  PD V++ + +  LCKE                       GR+
Sbjct: 228 MGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKE-----------------------GRV 264

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           +EA +L  +M      PD VTYT +++G+CR G +++A K+  +M   G  P   +Y A 
Sbjct: 265 KEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAI 324

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           L  LC +G   E   +++  +      + +T + +++   + G ++ AC V ++M++ G 
Sbjct: 325 LRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGL 384

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
                    LI   C+  ++DGAK+   + ++ G + N   F+ L+ GFC+K + +  L+
Sbjct: 385 QLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLA 444

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           + D++      PD   Y ++I  L + G V++A  +  +M SKGLV   + Y T+ + Y 
Sbjct: 445 IPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYL 504

Query: 561 QVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEE 600
             G     L  L+ M   Q   T   Q+   LC+  Y +E
Sbjct: 505 TKGNPTAALNTLDGMTKNQLYITP--QIYNCLCT-SYADE 541



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/441 (22%), Positives = 189/441 (42%), Gaps = 20/441 (4%)

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------S 311
           R  DA+++ D M  +G +PD  +   ++  L + +     R + ++M            +
Sbjct: 123 RPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAATTHVYN 182

Query: 312 NLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
            + H     G   +A+ +V +M   G   D  +Y  V+  +CR G   +A     +M   
Sbjct: 183 AMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKE 242

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G +P+TV++ + ++GLC  G+  EA ++         TP+ +TY+ ++ G  R G + EA
Sbjct: 243 GIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEA 302

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
             +   M   G  P     N +++ LC +G M    + + E   +    + V   +LI  
Sbjct: 303 VKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINA 362

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
           +C++GD+  A  +   M       +  TY  +I    K   ++ A E   +M+  G  P 
Sbjct: 363 YCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPN 422

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
              +  ++  +C+    + +L + ++++ +     +  Y  +I  LC  G +++A ++  
Sbjct: 423 YSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFD 482

Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL--IPDLKLCKKVSERLIL 664
           ++       D+     L  +YL KG P  A      M    L   P +  C   S     
Sbjct: 483 QMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKNQLYITPQIYNCLCTS----Y 538

Query: 665 EGKSEEADTLMLRFVERGHIQ 685
             + E  + L +R +ERG I+
Sbjct: 539 ADEKETLNMLWVRAIERGLIK 559


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 143/574 (24%), Positives = 264/574 (45%), Gaps = 22/574 (3%)

Query: 124 ALQFFYWADR-QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYL 182
            L FF+WA    +    + + Y  +L+++ K +L    + VL  M  R  +   EA + +
Sbjct: 75  GLYFFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSV 134

Query: 183 MVAYSRAGKLRNAMYVLSMM-QKAAVAPNLLICNTAIHVLVVGNKLAKAL----RFLERM 237
           +  Y+  G +  A+ +  M+ +     P ++  N+ ++ LV   K+  A     + LER 
Sbjct: 135 ICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERG 194

Query: 238 QLAGITPNVLTYNCLI--KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
              G+   V  Y+ +I  KG CD+ ++++  KLID+    GC P+ V Y  ++   CK+ 
Sbjct: 195 GDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKG 254

Query: 296 RIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
            +K    + E++     L            F   G+ +   +L+N+M+ MG   +V  + 
Sbjct: 255 DLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFN 314

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
           ++++   + G +D+A +M++ M   GC+P+  +Y   +N  C  G+  EA E +  ++E 
Sbjct: 315 SIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKER 374

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              PN  +Y+ +MH   ++G    A D++ ++ + G  P  V     I      G++D A
Sbjct: 375 TLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVA 434

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
               ++ + KG   +   +  L+ G C+KG    A  LL +M      PD   Y T++D 
Sbjct: 435 LMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDG 494

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
             +N  +++ATEL   ++SKG+ P VV Y  +I   C+ G++ D +  + KM        
Sbjct: 495 FIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPD 554

Query: 584 AYNQ--VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
            Y    VI+       L+ A K+ G++++   K +      L+  +        A KV  
Sbjct: 555 EYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFR 614

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
            M + NL P++     +       GK E+A +  
Sbjct: 615 AMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFF 648



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 141/599 (23%), Positives = 251/599 (41%), Gaps = 41/599 (6%)

Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
           D +W     P  + Y ++++   K    + A RV   +  +G     E +  L+  + +A
Sbjct: 229 DDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKA 288

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GK +    +L+ M    +  N+ + N+ I        + KA   +  M   G  P++ TY
Sbjct: 289 GKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTY 348

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK--- 306
           N LI   C   RIK+A + ++    +   P+K SY  +M   CK+       D++ K   
Sbjct: 349 NILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAE 408

Query: 307 ------MVNDSNLFHDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                 +V+     H     G I+ A  +  +M + G  PD   Y  +++G C+ G    
Sbjct: 409 TGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPA 468

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           AK +L +M     +P+   Y   ++G   N +  +A E+      +   P  + Y+V++ 
Sbjct: 469 AKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIK 528

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           GL + GK+++A   V +M      P     + +I    ++  +D A K   + + +    
Sbjct: 529 GLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKP 588

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           NVV +TSLI GFC+  D+  A  +   M     +P+ VTYT +I   SK G+ E+A    
Sbjct: 589 NVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFF 648

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL------------LKLLEKMLSK--QKCRT 583
             ML    +P   T+  +I+    +     L            L     M+S+   +   
Sbjct: 649 ELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIA 708

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP-----LLAYK 638
            YN +I  LC  G ++ A  +  K+LR     D+     L+      G       +++  
Sbjct: 709 TYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGD 768

Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRV 697
           +    F       LKL     ++ + +GK  EA  ++L  +E   +   S++  + QRV
Sbjct: 769 LTKIDFQTAFEYSLKL-----DKYLYDGKPSEASYILLNLIEDSKL---SDQQGEVQRV 819



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 81/204 (39%), Gaps = 21/204 (10%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           Q D   AL+ F    +Q +Y+ + + Y  ++    K      A++V R M    +E    
Sbjct: 568 QHDLDSALKMFGQMMKQ-KYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVV 626

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG------------- 224
            ++ L+  +S+ GK   A     +M      PN    +T  H L+ G             
Sbjct: 627 TYTILIGGFSKTGKPEKAASFFELMLMNNCLPN----DTTFHYLINGLTNITNTTLLIEK 682

Query: 225 ---NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
              N  +  L F   M   G +  + TYN +I   C    +  A  L  +M  KG   D 
Sbjct: 683 NEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDS 742

Query: 282 VSYYTVMGYLCKEKRIKEVRDLME 305
           V +  ++  LC+  + KE R+++ 
Sbjct: 743 VCFSALLHGLCQTGKSKEWRNIIS 766


>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
 gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
          Length = 600

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 220/461 (47%), Gaps = 26/461 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           DP V   ++ +L+++     A RV   M  RG+     A + L+ A +RA     A  V 
Sbjct: 113 DPRVPSWLVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVF 172

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +A +A +  + N  +HV +     A+A   + RM  AG+  +  +YN +I  YC  
Sbjct: 173 DEMARAGLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKK 232

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
               +A+ + D M  +G   D V++ +++  LCK                        GR
Sbjct: 233 GMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCK-----------------------YGR 269

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++EA +L  +M+     PD VTYT +++G+CR G +++A K+  +M   G  P   +Y A
Sbjct: 270 VKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNA 329

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            L  LC +GK  E  +++N  +E     + +T + +++   + G ++ AC V ++M++ G
Sbjct: 330 ILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESG 389

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
                     LI   C+  ++D AK+   + ++ G + N   F+ L+ GFC+K + +  L
Sbjct: 390 LQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVL 449

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            + D++      PD   Y ++I  L + G V++A ++  +M SKGLV   + Y T+ + Y
Sbjct: 450 LIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTY 509

Query: 560 CQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEE 600
              G+       L+ M   Q   T   Q+   LC+  Y +E
Sbjct: 510 LTEGKPVAASNTLDGMAKNQLYITP--QIYNCLCT-SYADE 547



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/524 (22%), Positives = 212/524 (40%), Gaps = 62/524 (11%)

Query: 176 PEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
           P   S+L++  +++ +  +A+ V   M+   +AP+   C   +  L      A A R  +
Sbjct: 114 PRVPSWLVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFD 173

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            M  AG+  +   YN ++           A  L+  M   G   D+ SY TV+   CK  
Sbjct: 174 EMARAGLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCK-- 231

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
                                +G   EA  + ++M + G   D VT+ ++++G C+ G +
Sbjct: 232 ---------------------KGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRV 270

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
            +A ++  +M      P+ V+YT  ++G C  G   EA ++    E     P   TY+ +
Sbjct: 271 KEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAI 330

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           +  L  +GK+ E   ++ EM ++      V  N LI + C+ G M  A K  ++ +  G 
Sbjct: 331 LRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGL 390

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
            +N   + +LI GFC+  +L+EA      M      P+   ++ ++D   K    +    
Sbjct: 391 QLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLL 450

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSF 595
           +  +++ +GL P    YR++I R                                 LC  
Sbjct: 451 IPDELMKRGLPPDKAVYRSLIRR---------------------------------LCRK 477

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL--IPDLK 653
           G +++A K+  ++       D+     L  +YL +G P+ A      M    L   P + 
Sbjct: 478 GLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYITPQIY 537

Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRV 697
            C   S       + E  + L +R +ERG I+    + + + R+
Sbjct: 538 NCLCTS----YADEKETLNILWVRAIERGLIKKSVYKLMHQARL 577



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 200/489 (40%), Gaps = 31/489 (6%)

Query: 75  HPLVREVCRLIELRSAWSPKLEGELRNLLRSLK-PRQICAVLRSQADERVALQFFYWADR 133
           HP  R + R + LR   S  L           + P  +  VL   A    AL+ F     
Sbjct: 83  HPAARALLRDLSLRHPLSSPLLLPSLLAAADPRVPSWLVLVLAQSARPHDALRVF----D 138

Query: 134 QWRYRH---DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
           Q R R    D      +L  L++ ++   A+RV   MAR G+      ++ ++    +AG
Sbjct: 139 QMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLHVCLKAG 198

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
               A  +++ M  A V  +    NT I +        +A+   +RM   GI  + +T+N
Sbjct: 199 DAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWN 258

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI G C   R+K+A +L  EM     +PD V+Y T++   C+                 
Sbjct: 259 SLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCR----------------- 301

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                  G IEEA +L  +M   G +P V TY A++   C  G++ +  ++L +M     
Sbjct: 302 ------AGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKV 355

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           + + V+    +N  C  G    A ++     E     N  TY  ++HG  +  +L EA +
Sbjct: 356 QADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKE 415

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
              +MV  GF P     + L+   C++   D       E + +G   +   + SLIR  C
Sbjct: 416 AFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLC 475

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +KG +++A  + D M       D++ Y T+       G+   A+  +  M    L  T  
Sbjct: 476 RKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYITPQ 535

Query: 551 TYRTVIHRY 559
            Y  +   Y
Sbjct: 536 IYNCLCTSY 544


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 227/476 (47%), Gaps = 41/476 (8%)

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
           +G  PN++T + L+KG C   ++ DA++L D+M   G   D + Y  ++  L K ++ + 
Sbjct: 3   SGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARR 62

Query: 300 VRDLMEKMVND---SNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
             +L  +M+++    N F            G   +  ++  +M  MG  P+V+ Y++++N
Sbjct: 63  AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLIN 122

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G CRVG+L +A  +  +M   G K N ++Y + ++  C  G   EA    +    E   P
Sbjct: 123 GLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILP 182

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           + +T++ ++  L ++GK+ EA  +   M+K+G  P  V  N L+  LC   +MD A +  
Sbjct: 183 DVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLF 242

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
           +  + +G  ++V+++ +LI G+C  G  EEA++L   M   +  P   TYT ++ AL +N
Sbjct: 243 EVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQN 302

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE---DLLKLLEKMLSKQKCRTA 584
           GR+  A EL   M   G  P++ TY  ++   C+ G +E   D+ + L+ +  K   R  
Sbjct: 303 GRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRI- 361

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           Y+ +I  +      E A +I  ++       +  T ++++     +G  L A ++  +M 
Sbjct: 362 YSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQM- 420

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ----PKSEEHLQRQR 696
                               E    E D +   F+ RG +Q     K+ E L+R R
Sbjct: 421 --------------------EESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMR 456



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 201/424 (47%), Gaps = 12/424 (2%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M R G +     + YL+ A  +  + R A+ +   M     + N       I  L     
Sbjct: 35  MTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGL 94

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
             K L+    M   GI PNV+ Y+ LI G C + ++++A+ L DEM  +G   + ++Y +
Sbjct: 95  AIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNS 154

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMG 334
           ++   C+    KE      +MV +  L               +G+++EA ++   M + G
Sbjct: 155 LIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQG 214

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             P++VTY +++NG C   ++D A ++ + M   G K + +SY   +NG C +GK+ EA 
Sbjct: 215 EAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAM 274

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
            +    + E  TP+  TY++++  L + G++  A ++   M   G  P+     +L+  L
Sbjct: 275 TLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGL 334

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
           C+ G ++ A    +   +     ++  ++ LI G  Q    E A+ + D++      P+ 
Sbjct: 335 CKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNI 394

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           VTY  +I+ L K G++ EA  L ++M   G     +++  +I  + Q  +V+  ++ L++
Sbjct: 395 VTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKR 454

Query: 575 MLSK 578
           M  K
Sbjct: 455 MREK 458



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 226/480 (47%), Gaps = 28/480 (5%)

Query: 124 ALQFFYWADRQWR--YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIE-CRPEAFS 180
           AL+ F   D+  R  ++ D ++Y  ++  L KT+    A+R + L  R   E C    F+
Sbjct: 28  ALELF---DKMTRSGFQGDILLYGYLINALRKTR---QARRAVELHRRMLSEICSGNFFT 81

Query: 181 YLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           Y +V  S  + G     + +   M    + PN+++ ++ I+ L    KL +A+   + M 
Sbjct: 82  YGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMV 141

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             GI  NV+TYN LI   C     K+A +   +M  +G  PD V++ T++ +L K+ +++
Sbjct: 142 SQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQ 201

Query: 299 EVRDLMEKMVNDSNL--------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
           E   + E M+                    H Q  ++ A  L   M + G   DV++Y  
Sbjct: 202 EAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQ--MDHAVRLFEVMVERGIKIDVISYNT 259

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++NG+C  G+ ++A  + ++M +    P+  +YT  L  L  NG+   A+E+ N  +   
Sbjct: 260 LINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICG 319

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
            +P+  TY+V++ GL + G + EA DV R +    + P+    ++LI  + +  + + A 
Sbjct: 320 QSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAM 379

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           +   E    G   N+V +  +I G C++G L EA  L   M     + D +++  II   
Sbjct: 380 EIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGF 439

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL-KLLEKMLSKQKCRT 583
            +  +V++A E + +M  K   P       +++ Y    +  +L    L +++ K+  +T
Sbjct: 440 LQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSELPNNFLHELVQKKTLKT 499



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 117/249 (46%), Gaps = 2/249 (0%)

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           +K G+ P  V ++ L++ +C EGK+  A +   +    G   +++ +  LI    +    
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
             A+ L   M       +  TY  +ID+L K+G   +  ++  +M++ G+ P V+ Y ++
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 556 IHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I+  C+VG++ + + L ++M+S+  +     YN +I   C FG  +EA +   +++    
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             D  T   L++    KG    AYK+   M  +   P++     +   L L  + + A  
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 674 LMLRFVERG 682
           L    VERG
Sbjct: 241 LFEVMVERG 249


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 157/630 (24%), Positives = 271/630 (43%), Gaps = 54/630 (8%)

Query: 109 RQICAVLRSQA-DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLM 167
           + +  +LRS A D   ALQ F    +Q R  H       MLE++      +   +V  LM
Sbjct: 79  QNVVHMLRSAAADPAEALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLM 138

Query: 168 ARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
            R+ ++     F  +  +    G LR+A   L MM++A +  N    N  I+ LV     
Sbjct: 139 QRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYD 198

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGY------------------------------- 256
            +A+   + M   GI P+V TY+ L+  +                               
Sbjct: 199 REAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDVETVVWLLREMEDHGVKPNVYSYTICI 258

Query: 257 ---CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------ 307
                  R ++A K++ +M  +GC PD V+   ++  LC   R+ + +D+  KM      
Sbjct: 259 RVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQK 318

Query: 308 ---VNDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
              V    L     D G      E+ N M   G   +VV YTAVV+  C+VG +D+A  +
Sbjct: 319 PDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDV 378

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             QM   G +P   SY + ++G     +   A E+ N       TPN  TY + ++   +
Sbjct: 379 FDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGK 438

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            G+  +A      M  KG  P  V  N ++ SL + G++  AK+   E  + G   + + 
Sbjct: 439 SGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNIT 498

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +T +I+   +  + +EA+ +  +M   +  PD +   ++ID L K GR  EA ++  ++ 
Sbjct: 499 YTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELK 558

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLE 599
              L PT  TY T++    + G+V++++ LLE+M S         YN V++ LC  G + 
Sbjct: 559 EMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVN 618

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
            A  +L  +       D S+ +  +   + +     A+++ C+M  + L PD      + 
Sbjct: 619 YALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKVLAPDYTTLCTIL 677

Query: 660 ERLILEGKSEEADTLMLRFVERGHIQPKSE 689
              +  G   EA   +  ++    +QP S+
Sbjct: 678 PSFVKNGLMNEALHTLKEYI----LQPGSK 703



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 224/510 (43%), Gaps = 63/510 (12%)

Query: 178  AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
             ++ L+    R GK++  M++L  M   +  PNL+  NT +  L    ++  AL  L  M
Sbjct: 568  TYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNM 627

Query: 238  QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
             + G  P++ +YN  + G     R+ +A ++  +M  K  +PD  +  T++    K   +
Sbjct: 628  TMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK-KVLAPDYTTLCTILPSFVKNGLM 686

Query: 298  KEVRDLMEKMV------NDSNLFHD-----------QGRIE------------------- 321
             E    +++ +       D + FH            +  IE                   
Sbjct: 687  NEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSP 746

Query: 322  ------------EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                        EA ELV +   +G      +Y A++ G      +D A+ +  +M   G
Sbjct: 747  LIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLG 806

Query: 370  CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE---EWWTPNAITYSVVMHGLRREGKLS 426
            C P+  +Y   L+ +   GKS+   +M+   +E   + +    +TY+ ++ GL +   L 
Sbjct: 807  CDPDEFTYNLILDAM---GKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLY 863

Query: 427  EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
            EA D+  +++ +GF PTP     L+  L ++GK++ A+    E L+ GC  N   +  L+
Sbjct: 864  EAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILL 923

Query: 487  RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
             G+   G+ E+   L  +M     +PD  +YT +I AL   GR+ ++     ++   GL 
Sbjct: 924  NGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLE 983

Query: 547  PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA-----YNQVIENLCSFGYLEEA 601
            P ++TY  +IH   + GR+E+ + L   M   +K   A     YN +I  L   G   EA
Sbjct: 984  PDLITYNLLIHGLGRSGRLEEAVSLFNDM---EKSGIAPNLYTYNSLILYLGKEGKAAEA 1040

Query: 602  GKILGKVLRTASKADASTCHVLVESYLNKG 631
            GK+  ++L+   K +  T + L+  Y   G
Sbjct: 1041 GKMYEELLKNGWKPNVFTYNALIGGYSVSG 1070



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 153/328 (46%), Gaps = 19/328 (5%)

Query: 210  NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
            N LIC      LV  N +  A      M+  G  P+  TYN ++       RI+D +K+ 
Sbjct: 780  NALICG-----LVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQ 834

Query: 270  DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------------NLFHD 316
             EM  KG     V+Y T++  L K K + E  DL  K++++               L  D
Sbjct: 835  KEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKD 894

Query: 317  QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
             G+IE+A++L ++M   GC P+   Y  ++NG+   G  ++  ++ Q M   G  P+  S
Sbjct: 895  -GKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKS 953

Query: 377  YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
            YT  +  LC  G+  ++        E    P+ ITY++++HGL R G+L EA  +  +M 
Sbjct: 954  YTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDME 1013

Query: 437  KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            K G  P     N LI  L +EGK   A K  +E L  G   NV  + +LI G+   G  +
Sbjct: 1014 KSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTD 1073

Query: 497  EALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             A +    M +    P++ TY  + + L
Sbjct: 1074 NAFASYGQMIVGGCPPNSSTYMQLPNQL 1101



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 127/559 (22%), Positives = 241/559 (43%), Gaps = 18/559 (3%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNAMY 197
            D I Y MM++  SK      A +V   M      C P+  A + L+    +AG+   A  
Sbjct: 495  DNITYTMMIKCCSKASNADEAMKVFSEMIE--TRCVPDVLAVNSLIDTLYKAGRGNEAWK 552

Query: 198  VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
            +   +++  + P     NT +  L    K+ + +  LE M      PN++TYN ++   C
Sbjct: 553  IFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLC 612

Query: 258  DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL---MEKMVNDSNL- 313
                +  A+ ++  M +KGC PD  SY T +  L KE R+ E   +   M+K++      
Sbjct: 613  KNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTT 672

Query: 314  -------FHDQGRIEEAKELVNQ-MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                   F   G + EA   + + + Q G   D  ++ +++ G  +   ++++ +  + +
Sbjct: 673  LCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENI 732

Query: 366  YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
                   +    +  +  LC + K+LEA E++   E    +    +Y+ ++ GL  E  +
Sbjct: 733  ALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLI 792

Query: 426  SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
              A  +  EM + G  P     NL++ ++ +  +++   K  +E   KG     V + ++
Sbjct: 793  DVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTI 852

Query: 486  IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
            I G  +   L EA+ L   +      P   TY  ++D L K+G++E+A +L  +ML  G 
Sbjct: 853  ISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGC 912

Query: 546  VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGK 603
             P    Y  +++ Y   G  E + +L + M+ +       +Y  +I  LC+ G L ++  
Sbjct: 913  KPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLS 972

Query: 604  ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
               ++     + D  T ++L+      G    A  +   M    + P+L     +   L 
Sbjct: 973  YFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLG 1032

Query: 664  LEGKSEEADTLMLRFVERG 682
             EGK+ EA  +    ++ G
Sbjct: 1033 KEGKAAEAGKMYEELLKNG 1051



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 170/421 (40%), Gaps = 62/421 (14%)

Query: 67   VLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQ 126
            +L +D F  PL+R +C+    ++  + +L  +  +L  SLK     A++    DE     
Sbjct: 737  ILLDDFFLSPLIRHLCK--SKKALEAHELVKKFESLGVSLKTGSYNALICGLVDE----- 789

Query: 127  FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV-- 184
                                         L   A+ +   M R G  C P+ F+Y ++  
Sbjct: 790  ----------------------------NLIDVAEGLFSEMKRLG--CDPDEFTYNLILD 819

Query: 185  AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITP 244
            A  ++ ++ + + V   M         +  NT I  LV    L +A+    ++   G +P
Sbjct: 820  AMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSP 879

Query: 245  NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
               TY  L+ G     +I+DA  L DEM   GC P++  Y  ++                
Sbjct: 880  TPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILL---------------- 923

Query: 305  EKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
                   N +   G  E+  EL   M   G  PD+ +YT ++   C  G L+ +    +Q
Sbjct: 924  -------NGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQ 976

Query: 365  MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
            +   G +P+ ++Y   ++GL  +G+  EA  + N  E+    PN  TY+ ++  L +EGK
Sbjct: 977  LTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGK 1036

Query: 425  LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
             +EA  +  E++K G+ P     N LI      G  D A     + +  GC  N   +  
Sbjct: 1037 AAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQ 1096

Query: 485  L 485
            L
Sbjct: 1097 L 1097


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 172/332 (51%), Gaps = 23/332 (6%)

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+ LTY  +++  C   RI DA+  ++EM  +G  PD   Y  V+  LC+E++++E R L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
            EKMV               K+ +N        P+VVTY  ++NG C+   ++ A ++ +
Sbjct: 67  FEKMV---------------KQRIN--------PNVVTYNTLINGLCKAWRIETAYELFK 103

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   G  P  VSY   ++G C     + A+++ +        PN +TY+ ++ GL + G
Sbjct: 104 EMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSG 163

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           K+  A +V+  MVKKG  P     + LI   C+  ++D A K +++ + +G A  VV + 
Sbjct: 164 KVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN 223

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            L+   C+   LE+A  L   M   +  P  VTY T++ AL  + +++ A  L  +M++K
Sbjct: 224 ILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 283

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           G  P  +TY T+     + G+V +  +L+EKM
Sbjct: 284 GCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 172/339 (50%), Gaps = 25/339 (7%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+A +Y  ++    +  ++ +A+  +  M    + P+  I N  +  L    K+ +A   
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
            E+M    I PNV+TYN LI G C   RI+ A +L  EM  KG  P +VSY T++   CK
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 294 EKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
           +K +   +D+ +KMV  +                       C+P+VVTYT +++G  + G
Sbjct: 127 KKDLVAAKDVFDKMVRSN-----------------------CVPNVVTYTTLIDGLSKSG 163

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           ++  A ++L  M   G  PN  +Y+  ++G C   +  EA +++     +   P  +TY+
Sbjct: 164 KVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN 223

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
           ++++ L R  KL +A  + R M ++   PT V  N L+++LC   ++DGA +   E + K
Sbjct: 224 ILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 283

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
           GC  + + + +L  G  + G + EA  L++ M L K++P
Sbjct: 284 GCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 155/298 (52%), Gaps = 4/298 (1%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PD +TY  +V   C+   +D A   +++M   G KP+   Y   L+GLC   K  EAR +
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
                ++   PN +TY+ +++GL +  ++  A ++ +EM  KG+ PT V  N LI   C+
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
           +  +  AK    + +   C  NVV +T+LI G  + G ++ A  +LD M      P+  T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           Y+ +ID   K  RV+EA +L+ +M+++G+ PTVVTY  +++  C+  ++ED  KL   M 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM- 245

Query: 577 SKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           ++++C      YN ++  LC    L+ A ++  +++      DA T   L       G
Sbjct: 246 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAG 303



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 158/332 (47%), Gaps = 27/332 (8%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  ++E L KTK    A   +  MA RGI  +P+AF Y  ++    +  K+  A  
Sbjct: 8   DALTYGPIVERLCKTKRIDDALATVEEMATRGI--KPDAFIYNFVLSGLCQEEKVEEARL 65

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M K  + PN++  NT I+ L    ++  A    + M   G  P  ++YN LI G+C
Sbjct: 66  LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
               +  A  + D+M    C P+ V+Y T++  L K                        
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSK-----------------------S 162

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G+++ A E+++ M + G  P+V TY+ +++GFC+V  +D+A K+L+QM   G  P  V+Y
Sbjct: 163 GKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTY 222

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              LN LC   K  +A ++     +    P  +TY+ ++  L    +L  A  +  EM+ 
Sbjct: 223 NILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIA 282

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           KG  P  +  + L   L R GK+  A++ M++
Sbjct: 283 KGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 314



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 160/332 (48%), Gaps = 25/332 (7%)

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPD 338
           PD ++Y  ++  LCK KRI                       ++A   V +M+  G  PD
Sbjct: 7   PDALTYGPIVERLCKTKRI-----------------------DDALATVEEMATRGIKPD 43

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
              Y  V++G C+  ++++A+ + ++M      PN V+Y   +NGLC   +   A E+  
Sbjct: 44  AFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFK 103

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
               + + P  ++Y+ ++ G  ++  L  A DV  +MV+    P  V    LI  L + G
Sbjct: 104 EMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSG 163

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           K+  A + +   + KG   NV  ++ LI GFC+   ++EA  LL+ M      P  VTY 
Sbjct: 164 KVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN 223

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            ++++L +  ++E+A +L   M  +   PTVVTY T++   C   +++   +L  +M++K
Sbjct: 224 ILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 283

Query: 579 QKCRTA--YNQVIENLCSFGYLEEAGKILGKV 608
                A  Y+ +   L   G + EA +++ K+
Sbjct: 284 GCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 124/262 (47%), Gaps = 23/262 (8%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R   + + Y  ++  L K    + A  + + MA +G      +++ L+  + +   L  A
Sbjct: 74  RINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAA 133

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             V   M ++   PN++   T I  L    K+  A   L+ M   G+TPNV TY+CLI G
Sbjct: 134 KDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDG 193

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           +C + R+ +A KL+++M  +G +P  V+Y  ++  LC+                      
Sbjct: 194 FCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRAD-------------------- 233

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
              ++E+A +L   M+Q  C P VVTY  ++   C   +LD A ++  +M   GC P+ +
Sbjct: 234 ---KLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAI 290

Query: 376 SYTAFLNGLCHNGKSLEAREMI 397
           +Y     GL   GK  EA+E++
Sbjct: 291 TYDTLAWGLTRAGKVHEAQELM 312



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 4/184 (2%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++ LSK+   Q A  VL  M ++G+      +S L+  + +  ++  A  +L  
Sbjct: 150 VTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQ 209

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    +AP ++  N  ++ L   +KL  A +    M      P V+TYN L++  C   +
Sbjct: 210 MVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQ 269

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-VNDSNLFHDQGRI 320
           +  A +L  EM  KGC PD ++Y T+   L +  ++ E ++LMEKM +   N F   GR 
Sbjct: 270 LDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNPF---GRS 326

Query: 321 EEAK 324
            + K
Sbjct: 327 SQGK 330



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 4/174 (2%)

Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
           PD +TY  I++ L K  R+++A   + +M ++G+ P    Y  V+   CQ  +VE+   L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 572 LEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
            EKM+ KQ+       YN +I  LC    +E A ++  ++          + + L++ + 
Sbjct: 67  FEKMV-KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125

Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            K   + A  V  +M   N +P++     + + L   GK + A  ++   V++G
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 179


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 144/610 (23%), Positives = 269/610 (44%), Gaps = 59/610 (9%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWR 136
           LV+++ +++     W   LE    +    +         R + D  + L+ F WA ++  
Sbjct: 34  LVKDIIQILSTHPHWEKSLETRFSDCETPVSGIAHFVFDRIR-DPGLGLKLFEWASKRSD 92

Query: 137 YRH--DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
           +    D      +L++L++ ++    + +L  M  + +    EA S+++ AY  +G +  
Sbjct: 93  FNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNR 152

Query: 195 AMYVLSMMQKAA-VAPNLLICNTAIHVLVVGNKLAKALRFLERM---------------- 237
           A+ +  +        P+++ CN  ++ L+   K+  A +  E M                
Sbjct: 153 ALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMV 212

Query: 238 -------------------QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
                                 G  PN++ YN L+ GY     ++ A  L  E+ +KG  
Sbjct: 213 RGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFL 272

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------------VNDSNLFHDQGRIEEAK 324
           P   +Y  ++  LCK+   K V  L+ +M              + D+ + H   +IE  K
Sbjct: 273 PTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHG-CKIEVGK 331

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L   +++ GC PD+ TY  +++G CR G++ +A+++L+     G  PN +SYT  ++  
Sbjct: 332 TL-RWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVY 390

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  GK L A ++     E+    + + Y  ++HGL   G++  A  V  +MV++G  P  
Sbjct: 391 CKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDA 450

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
              N+L+  LC++G++  AK  + E L++  +++     +L+ GF + G L+EA  L + 
Sbjct: 451 NVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFEL 510

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
                 DP  V Y  +I    K G + +A   + +M      P   TY T+I  Y +   
Sbjct: 511 TIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQND 570

Query: 565 VEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           + + LKL  +M+ KQKC+     Y  +I   C  G    A K   ++  +  K +  T  
Sbjct: 571 LHNALKLFGQMV-KQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYT 629

Query: 622 VLVESYLNKG 631
           +L+  +  +G
Sbjct: 630 ILIGCFCKEG 639



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 204/462 (44%), Gaps = 26/462 (5%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y +M+  L K    +    +L  M  RG++   + ++ ++ A  + G        L  +
Sbjct: 277 TYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWI 336

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
            +    P++   NT I       K+ +A   LE     G++PN L+Y  LI  YC   + 
Sbjct: 337 TENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKC 396

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFH-- 315
             A  L   M  KG   D V+Y  ++  L     +     + +KMV      D+N+++  
Sbjct: 397 LRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVL 456

Query: 316 -----DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                 +GR+  AK L+ +M       D      +V+GF R G+LD+AKK+ +     G 
Sbjct: 457 MNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGM 516

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
            P  V Y A + G C  G   +A   +   ++   +P+  TYS ++ G  ++  L  A  
Sbjct: 517 DPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALK 576

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +  +MVK+   P  V    LI   CR G    A+K  +E  + G   NVV +T LI  FC
Sbjct: 577 LFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFC 636

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN------GRVEEATE----LMM-- 538
           ++G + +A S  + M L +  P+ VT+  +I+ L+ N       +  E+ E    LMM  
Sbjct: 637 KEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDF 696

Query: 539 --KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
              M+S G    V  Y +V+   C    V   L+L +KM  K
Sbjct: 697 FRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGK 738



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 207/465 (44%), Gaps = 20/465 (4%)

Query: 110 QICAVLRSQADERVALQFFYWADRQWRYRHDP-IVYY-MMLEILSKTKLCQGAKRVLRLM 167
            +C ++R    ER   +     + +W     P IV+Y  +++   K    + A  + + +
Sbjct: 207 SVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKEL 266

Query: 168 ARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN-- 225
             +G     E +  ++    +    +    +L  M++  V  N+ + N+ +   +     
Sbjct: 267 KMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCK 326

Query: 226 -KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            ++ K LR++      G  P++ TYN LI G C   ++ +A +L++    +G SP+K+SY
Sbjct: 327 IEVGKTLRWITE---NGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSY 383

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSN---------LFHD---QGRIEEAKELVNQMSQ 332
             ++   CK+ +     DL   M    +         L H     G ++ A  + ++M +
Sbjct: 384 TPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVE 443

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            G +PD   Y  ++NG C+ G L  AK +L +M H     +       ++G   +GK  E
Sbjct: 444 RGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDE 503

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A+++   +  +   P  + Y+ ++ G  + G +++A   V+ M      P     + +I 
Sbjct: 504 AKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIID 563

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
              ++  +  A K   + + + C  NVV +TSLI GFC+ GD   A    ++M      P
Sbjct: 564 GYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKP 623

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           + VTYT +I    K G++ +A      ML    +P  VT+  +I+
Sbjct: 624 NVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLIN 668



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 116/489 (23%), Positives = 191/489 (39%), Gaps = 61/489 (12%)

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
           + LR +   G E     ++ L+    R GK+  A  +L    K  ++PN L     IHV 
Sbjct: 331 KTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVY 390

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
               K  +A      M   G   +++ Y  L+ G      +  A+ + D+M  +G  PD 
Sbjct: 391 CKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDA 450

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQ 329
             Y  +M  LCK+ R+   + L+ +M++ +            + F   G+++EAK+L   
Sbjct: 451 NVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFEL 510

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVG-----------------------------------E 354
               G  P VV Y A++ G+C+ G                                   +
Sbjct: 511 TIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQND 570

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           L  A K+  QM    CKPN V+YT+ +NG C  G S  A +           PN +TY++
Sbjct: 571 LHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTI 630

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR--------------EGKM 460
           ++    +EGK+S+AC     M+     P  V  N LI  L                E K 
Sbjct: 631 LIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKA 690

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
                F +  ++ G    V  + S++   C    +  AL L D M      PD V++  +
Sbjct: 691 SLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAAL 750

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           +  L   GR +E    +   L++  +   V Y   ++ +   G   +  K+   +L   K
Sbjct: 751 VYGLCLEGRSKEWKNTISCKLNEWELQIAVKYSQKLNPFLPKGLTSEASKVFHTLLEGVK 810

Query: 581 CRTAYNQVI 589
                N +I
Sbjct: 811 LHIQENNLI 819



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 169/371 (45%), Gaps = 5/371 (1%)

Query: 316 DQGRIEEAKELVNQMSQM-GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH-GCKPN 373
           D G +  A EL +    +   +PDV+   A++N   +  +++ A+K+ ++M    GC  N
Sbjct: 146 DSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDN 205

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             S    + GLC   K  E R++IN    +   PN + Y+ ++ G  + G +  A  + +
Sbjct: 206 -YSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFK 264

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           E+  KGF PT     ++I  LC++         + E   +G  VNV  + S++    + G
Sbjct: 265 ELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHG 324

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
              E    L  +     +PD  TY T+I    ++G+V EA EL+   + +GL P  ++Y 
Sbjct: 325 CKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYT 384

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            +IH YC+ G+      L   M  K       AY  ++  L + G ++ A  +  K++  
Sbjct: 385 PLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVER 444

Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
               DA+  +VL+     KG    A  +   M ++NL  D  +   + +  I  GK +EA
Sbjct: 445 GVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEA 504

Query: 672 DTLMLRFVERG 682
             L    + +G
Sbjct: 505 KKLFELTIAKG 515



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 111/273 (40%), Gaps = 35/273 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  +++   K      A ++   M ++  +C+P   +Y  L+  + R G    A  
Sbjct: 554 DEFTYSTIIDGYVKQNDLHNALKLFGQMVKQ--KCKPNVVTYTSLINGFCRTGDSSRAEK 611

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
               M+ + + PN++     I       K++KA  F E M L    PN +T+N LI G  
Sbjct: 612 TFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLT 671

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM-----EKMVNDSN 312
           +      + K  + + +K  +   + ++  M     E+R+     ++      KMVN   
Sbjct: 672 NNLATAVSNKANESLEIK--ASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVN--- 726

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                     A +L ++M+  G  PD V++ A+V G C  G   + K  +       CK 
Sbjct: 727 ---------AALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTIS------CKL 771

Query: 373 N------TVSYTAFLNGLCHNGKSLEAREMINT 399
           N       V Y+  LN     G + EA ++ +T
Sbjct: 772 NEWELQIAVKYSQKLNPFLPKGLTSEASKVFHT 804


>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
 gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 217/449 (48%), Gaps = 26/449 (5%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWR-YRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           L P+++ +++  Q +  +ALQ F  A +  R + H+   Y  M+E LSK +  +  + ++
Sbjct: 99  LSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLI 158

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
             + +  I+C    F  ++  Y  AG+ + A+     +    + P++   NT ++ LV  
Sbjct: 159 SQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQN 218

Query: 225 NKLAKA-LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
            +     L F    +  GI PNV T N L+K  C  + I  AI++++EMP  G  P+ V+
Sbjct: 219 KRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVT 278

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           Y T++G                        +  +G +  A+ +  ++   G +PD  TYT
Sbjct: 279 YTTILGG-----------------------YVSKGDMVGARRVFGEILDRGWVPDPTTYT 315

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            +++G+C+ G    A K++ +M  +  +PN V+Y   +   C   KS E   +++   E+
Sbjct: 316 ILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEK 375

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
            + P++     V+  L  EGK+  AC++ ++++KK   P     + LI  LC+EGK+  A
Sbjct: 376 KYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEA 435

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           +K   E   KG   + + + +LI G C+ G+L EA  L D+M      P+  TY  +I  
Sbjct: 436 RKLFDE-FEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKG 494

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTY 552
             K G   E   +M +ML  G +P   TY
Sbjct: 495 FCKVGNAREGIRVMEEMLDNGCLPNKATY 523



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 167/401 (41%), Gaps = 58/401 (14%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           +I+ Y    R K AI+    +P  G  P   S+ T++  L + KR     DL+  M    
Sbjct: 176 VIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF----DLVHLMFK-- 229

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                           N   + G +P+V T   +V   C+  ++D A ++L++M   G  
Sbjct: 230 ----------------NCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMG-- 271

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
                                            + PN +TY+ ++ G   +G +  A  V
Sbjct: 272 ---------------------------------FIPNVVTYTTILGGYVSKGDMVGARRV 298

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             E++ +G+ P P    +L+   C++G+   A K M E        N V +  +I  +C+
Sbjct: 299 FGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCK 358

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           +    E L+LLDDM   K  P +     +ID L + G+VE A EL  K+L K   P    
Sbjct: 359 EKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAI 418

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-AYNQVIENLCSFGYLEEAGKILGKVLR 610
             T+IH  C+ G+V +  KL ++        T  YN +I  +C  G L EA ++   ++ 
Sbjct: 419 TSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVE 478

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
                +A T ++L++ +   G      +V   M +   +P+
Sbjct: 479 KGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 11/231 (4%)

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
           GA+RV   +  RG    P  ++ LM  Y + G+  +A+ V+  M++  V PN +     I
Sbjct: 294 GARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVII 353

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
                  K  + L  L+ M      P+      +I   C+  +++ A +L  ++  K C+
Sbjct: 354 EAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCT 413

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDL---MEKMVNDSNLFHDQ--------GRIEEAKELV 327
           PD     T++ +LCKE ++ E R L    EK    S L ++         G + EA  L 
Sbjct: 414 PDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLW 473

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           + M + GC+P+  TY  ++ GFC+VG   +  +++++M  +GC PN  +Y 
Sbjct: 474 DNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYA 524



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 129/285 (45%), Gaps = 47/285 (16%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKK-----GFFPTPVEINLLIQSLCREGKMD 461
           P+  +++ +++ L +  +     D+V  M K      G  P     N+L+++LC++  +D
Sbjct: 203 PSVRSFNTLLNTLVQNKRF----DLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDID 258

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A + ++E    G   NVV +T+++ G+  KGD+  A  +  ++      PD  TYT ++
Sbjct: 259 AAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILM 318

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           D   K GR  +A ++M +M    + P  VTY  +I  YC+  +  ++L LL+ ML K+  
Sbjct: 319 DGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI 378

Query: 582 RTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
            ++    +VI+ LC  G +E A ++  K+L+                             
Sbjct: 379 PSSALCCRVIDMLCEEGKVEVACELWKKLLK----------------------------- 409

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
                 +N  PD  +   +   L  EGK  EA  L   F E+G I
Sbjct: 410 ------KNCTPDNAITSTLIHWLCKEGKVWEARKLFDEF-EKGSI 447


>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 532

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 216/436 (49%), Gaps = 15/436 (3%)

Query: 116 RSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECR 175
           R   + +V L+F  +    +   H    Y +++  L +  L    + V+  M   G    
Sbjct: 68  RLNNNPQVGLKFMEFCRLNFSLIHCFSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHLID 127

Query: 176 PEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
                +L+ ++++AGK   A  ++  +Q      +  + N  ++ LV G K+ +A+ FL 
Sbjct: 128 SRVLGFLVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAI-FLF 186

Query: 236 RMQLAGITP-NVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
           +  LA  +P N  T+N LI+G C +  ++   +L + M   GC PD V+Y T++  LCK 
Sbjct: 187 KENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKA 246

Query: 295 KRIKEVRDLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQMGCIPDVVT 341
             +    DL++++ + ++              F   G++E A  L  +M + G  P VVT
Sbjct: 247 NELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVT 306

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           +  +++GF ++G +  A+ M ++M  + C P+ V++T+ ++G C  G      ++ +  +
Sbjct: 307 FNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMK 366

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
               +PN  TYSV+++ L ++ ++ EA D++R++     FP P   N +I   C+ G +D
Sbjct: 367 ARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVD 426

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A   + E   K C  + V FT LI G C KG + EAL +   M      PD +T ++++
Sbjct: 427 EANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLV 486

Query: 522 DALSKNGRVEEATELM 537
             L K G+  EA  ++
Sbjct: 487 ACLLKAGKPSEAFHIV 502



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 163/326 (50%), Gaps = 5/326 (1%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G++ EA  L  +       P+  T+  ++ G CRVGE+++  ++   M   GC P+ V+Y
Sbjct: 177 GKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTY 236

Query: 378 TAFLNGLCHNGKSLEAREMIN-TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
              ++GLC   +   A +++         +P+ +TY+ ++ G R+ GKL  A  +  EM+
Sbjct: 237 NTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMI 296

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           + G  PT V  N+LI    + G M  A+   ++  +  C  +VV FTSLI G+C+ GD+ 
Sbjct: 297 RSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIR 356

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
             L + D M      P+  TY+ II+AL K+ R+ EA +L+ ++    + P    Y  VI
Sbjct: 357 LGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVI 416

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
             +C+ G V++   ++ +M  +++CR     +  +I   C  G + EA  I  K+L    
Sbjct: 417 DGFCKAGNVDEANVIVTEM-EEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGC 475

Query: 614 KADASTCHVLVESYLNKGIPLLAYKV 639
             D  T   LV   L  G P  A+ +
Sbjct: 476 APDNITISSLVACLLKAGKPSEAFHI 501



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 167/384 (43%), Gaps = 38/384 (9%)

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++  M   G + D      +V  F + G+ D AKK++ ++     + ++  Y   LN L 
Sbjct: 115 VIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELV 174

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             GK  EA  +   +      PN  T+++++ GL R G++ +  ++   M   G  P  V
Sbjct: 175 KGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVV 234

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKG-CAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
             N LI  LC+  ++D A   ++E  ++  C+ +V+ +TS+I GF + G LE A  L ++
Sbjct: 235 TYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEE 294

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M     +P  VT+  +ID   K G +  A  +  KM S   +P VVT+ ++I  YC+ G 
Sbjct: 295 MIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGD 354

Query: 565 VEDLLKLLEKM-------------------------------LSKQKCRTA------YNQ 587
           +   LK+ + M                               L + KC         YN 
Sbjct: 355 IRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNP 414

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           VI+  C  G ++EA  I+ ++     + D  T  +L+  +  KG  + A  +  +M    
Sbjct: 415 VIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIG 474

Query: 648 LIPDLKLCKKVSERLILEGKSEEA 671
             PD      +   L+  GK  EA
Sbjct: 475 CAPDNITISSLVACLLKAGKPSEA 498



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 137/281 (48%), Gaps = 21/281 (7%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y  ++  L K      A  +L+ +  R  +C P+  +Y  ++  + + GKL  A  
Sbjct: 232 DVVTYNTLISGLCKANELDRACDLLKEVQSRN-DCSPDVMTYTSIISGFRKLGKLEAASV 290

Query: 198 VLSMMQKAAVAPNLLICNTAIHVL-VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           +   M ++ + P ++  N  I     +GN +A A    E+M      P+V+T+  LI GY
Sbjct: 291 LFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVA-AEAMHEKMASYSCIPDVVTFTSLIDGY 349

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------- 307
           C    I+  +K+ D M  +  SP+  +Y  ++  LCK+ RI E RDL+ ++         
Sbjct: 350 CRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKP 409

Query: 308 -----VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                V D   F   G ++EA  +V +M +  C PD VT+T ++ G C  G + +A  + 
Sbjct: 410 FIYNPVIDG--FCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIF 467

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
           ++M   GC P+ ++ ++ +  L   GK  EA  ++ T+ E+
Sbjct: 468 KKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQTASED 508



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 151/349 (43%), Gaps = 50/349 (14%)

Query: 170 RGIECRPEAF--SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
           +G E R  +F  +YL+    + GK+  A+++          PN    N  I  L    ++
Sbjct: 155 QGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEV 214

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG-CSPDKVSYYT 286
            K       MQ  G  P+V+TYN LI G C  + +  A  L+ E+  +  CSPD ++Y +
Sbjct: 215 EKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTS 274

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMG 334
           ++    K  +++    L E+M+               + F   G +  A+ +  +M+   
Sbjct: 275 IISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYS 334

Query: 335 CIPDVVTYTA-----------------------------------VVNGFCRVGELDQAK 359
           CIPDVVT+T+                                   ++N  C+   + +A+
Sbjct: 335 CIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEAR 394

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            +L+Q+      P    Y   ++G C  G   EA  ++   EE+   P+ +T+++++ G 
Sbjct: 395 DLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGH 454

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
             +G++ EA D+ ++M+  G  P  + I+ L+  L + GK   A   +Q
Sbjct: 455 CMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQ 503



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 3/245 (1%)

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY +++  L + G       V+  M   G       +  L+ S  + GK D AKK + E 
Sbjct: 95  TYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEV 154

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
             +   ++   +  L+    + G + EA+ L  +       P+T T+  +I  L + G V
Sbjct: 155 QGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEV 214

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQ 587
           E+  EL   M S G +P VVTY T+I   C+   ++    LL+++ S+  C      Y  
Sbjct: 215 EKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTS 274

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I      G LE A  +  +++R+  +    T +VL++ +   G  + A  +  +M + +
Sbjct: 275 IISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYS 334

Query: 648 LIPDL 652
            IPD+
Sbjct: 335 CIPDV 339



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 37/178 (20%)

Query: 173 ECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
            C P+   F+ L+  Y R G +R  + V  +M+   V+PN+   +  I+ L   N++ +A
Sbjct: 334 SCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEA 393

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK--------------- 275
              L +++ + + P    YN +I G+C    + +A  ++ EM  K               
Sbjct: 394 RDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIG 453

Query: 276 --------------------GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
                               GC+PD ++  +++  L K  +  E   +++    D NL
Sbjct: 454 HCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQTASEDLNL 511


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 198/393 (50%), Gaps = 20/393 (5%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM- 237
           F+ ++     AGK   A+ +L  M +    PN +  NT I       ++  AL  +  M 
Sbjct: 157 FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 212

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG-CSPDKVSYYTVMGYLCKEKR 296
           +  GI PN  TY  +I G+C + R+ +A+K+ DEM  KG   P+ V Y  ++G  C + +
Sbjct: 213 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 272

Query: 297 IKEVRDLMEKMVNDS-------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           +       ++MV                 LF D GR  EA ELV +M   G   DV TY 
Sbjct: 273 LDTALLYRDRMVERGVAMTVATYNLLVHALFMD-GRGTEAYELVEEMGGKGLALDVFTYN 331

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            ++NG C+ G + +A ++ + M   G +   V+YT+ +  L   G+  E  ++ + +   
Sbjct: 332 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 391

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
              P+ + Y+ +++     G +  A +++ EM KK   P  V  N L++ LC  G++D A
Sbjct: 392 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 451

Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
           +K + E   +G   ++V + +LI G+  KGD+++AL + ++M     +P  +TY  +I  
Sbjct: 452 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 511

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           L KNG+ ++A  ++ +M+  G+ P   TY ++I
Sbjct: 512 LCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 215/424 (50%), Gaps = 35/424 (8%)

Query: 211 LLICNTAIHVLV----VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           L +C T  ++++       K A+AL  L +M      PN +TYN +I G+C   R++ A+
Sbjct: 150 LPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAAL 205

Query: 267 KLIDEMPLKG-CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
            ++ EM  +G  +P++ +Y TV+   CK                        GR++EA +
Sbjct: 206 DIMREMRERGGIAPNQYTYGTVISGWCK-----------------------VGRVDEAVK 242

Query: 326 LVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           + ++M   G + P+ V Y A++ G+C  G+LD A     +M   G      +Y   ++ L
Sbjct: 243 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 302

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             +G+  EA E++     +    +  TY+++++G  +EG + +A ++   M ++G   T 
Sbjct: 303 FMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 362

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V    LI +L ++G++    K   E + +G   ++V + +LI      G+++ A  ++ +
Sbjct: 363 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 422

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M   +  PD VTY T++  L   GRV+EA +L+ +M  +G+ P +VTY T+I  Y   G 
Sbjct: 423 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGD 482

Query: 565 VEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           V+D L++  +M++K    T   YN +I+ LC  G  ++A  ++ +++      D ST   
Sbjct: 483 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 542

Query: 623 LVES 626
           L+E 
Sbjct: 543 LIEG 546



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 195/383 (50%), Gaps = 15/383 (3%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVS 376
           G+   A EL+ QM +    P+ VTY  V+ GFC  G +  A  ++++M   G   PN  +
Sbjct: 168 GKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYT 223

Query: 377 YTAFLNGLCHNGKSLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           Y   ++G C  G+  EA     EM+   E +   P A+ Y+ ++ G   +GKL  A    
Sbjct: 224 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVK---PEAVMYNALIGGYCDQGKLDTALLYR 280

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             MV++G   T    NLL+ +L  +G+   A + ++E   KG A++V  +  LI G C++
Sbjct: 281 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKE 340

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G++++AL + ++M         VTYT++I ALSK G+V+E  +L  + + +G+ P +V Y
Sbjct: 341 GNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLY 400

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLR 610
             +I+ +   G ++   +++ +M  K+       YN ++  LC  G ++EA K++ ++ +
Sbjct: 401 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTK 460

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
              + D  T + L+  Y  KG    A ++   M N+   P L     + + L   G+ ++
Sbjct: 461 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 520

Query: 671 ADTLMLRFVERGHIQPKSEEHLQ 693
           A+ ++   VE G I P    ++ 
Sbjct: 521 AENMVKEMVENG-ITPDDSTYIS 542



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 153/312 (49%), Gaps = 15/312 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A +V   M  +G E +PEA  Y  L+  Y   GKL  A+     M +  VA  +   N  
Sbjct: 240 AVKVFDEMLTKG-EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 298

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +H L +  +  +A   +E M   G+  +V TYN LI G+C    +K A+++ + M  +G 
Sbjct: 299 VHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 358

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKE 325
               V+Y +++  L K+ +++E   L ++ V               N     G I+ A E
Sbjct: 359 RATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE 418

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           ++ +M +    PD VTY  ++ G C +G +D+A+K++ +M   G +P+ V+Y   ++G  
Sbjct: 419 IMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYS 478

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G   +A  + N    + + P  +TY+ ++ GL + G+  +A ++V+EMV+ G  P   
Sbjct: 479 MKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDS 538

Query: 446 EINLLIQSLCRE 457
               LI+ L  E
Sbjct: 539 TYISLIEGLTTE 550



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 25/247 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +++    K    + A  +   M+RRG+      ++ L+ A S+ G+++    + 
Sbjct: 326 DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 385

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
               +  + P+L++ N  I+       + +A   +  M+   I P+ +TYN L++G C L
Sbjct: 386 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 445

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
            R+ +A KLIDEM  +G  PD V+Y T++ GY  K                        G
Sbjct: 446 GRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMK------------------------G 481

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
            +++A  + N+M   G  P ++TY A++ G C+ G+ D A+ M+++M  +G  P+  +Y 
Sbjct: 482 DVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYI 541

Query: 379 AFLNGLC 385
           + + GL 
Sbjct: 542 SLIEGLT 548



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 28/235 (11%)

Query: 118 QADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE 177
           + + + AL+ F    R+   R   + Y  ++  LSK    Q   ++     RRGI  RP+
Sbjct: 340 EGNVKKALEIFENMSRRG-VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI--RPD 396

Query: 178 AFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLE 235
              Y  L+ ++S +G +  A  ++  M+K  +AP+ +  NT +  L +  ++ +A + ++
Sbjct: 397 LVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 456

Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK 295
            M   GI P+++TYN LI GY     +KDA+++ +EM  KG +P  ++Y  ++  LCK  
Sbjct: 457 EMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK-- 514

Query: 296 RIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
                                 G+ ++A+ +V +M + G  PD  TY +++ G  
Sbjct: 515 ---------------------NGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 548



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 72/157 (45%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           R D ++Y  ++   S +     A  ++  M ++ I      ++ LM      G++  A  
Sbjct: 394 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 453

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           ++  M K  + P+L+  NT I    +   +  ALR    M   G  P +LTYN LI+G C
Sbjct: 454 LIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 513

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
              +  DA  ++ EM   G +PD  +Y +++  L  E
Sbjct: 514 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 550


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 229/503 (45%), Gaps = 26/503 (5%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           LM  Y   G +  A+ +   + +  V P+++I +  I+       + KA     RM+L G
Sbjct: 331 LMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMG 390

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           I PNV   N L++G+ + + ++ A  L DE    G + + V+Y  ++ +L +  ++ E  
Sbjct: 391 IQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEAC 449

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
           +L EKMV+                        G  P +V+Y  ++ G C+ G +D+A  M
Sbjct: 450 NLWEKMVSK-----------------------GITPSLVSYNNLILGHCKKGCMDKAYSM 486

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           L+ +   G KPN V+YT  ++G    G S  A  +          P   T++ V++GL +
Sbjct: 487 LKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGK 546

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            G++SE  D +   +K+GF  T +  N +I    +EG +D A    +E    G + +V+ 
Sbjct: 547 TGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVIT 606

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +TSLI G C+   +  AL +  DM       D V Y+ +ID   K   +E A++   ++L
Sbjct: 607 YTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELL 666

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML-SKQKCR-TAYNQVIENLCSFGYLE 599
             GL P  V Y ++I  +  +  +E  L L ++M+ +K  C    Y  +I  L   G L 
Sbjct: 667 DIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLS 726

Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
            A  +  ++L      D     VL+    N G    A K+   M   N+ P + +   + 
Sbjct: 727 LALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILI 786

Query: 660 ERLILEGKSEEADTLMLRFVERG 682
                EG  +EA  L    +++G
Sbjct: 787 AGNFREGNLQEAFRLHDEMLDKG 809



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 135/562 (24%), Positives = 245/562 (43%), Gaps = 81/562 (14%)

Query: 107 KPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILS-KTKLCQGAKRVLR 165
           K R +  +L  +++ + AL+FF+  +R+  +        +++ ILS  +K C   + +L 
Sbjct: 60  KNRFLVTLLSHKSNPKSALKFFHQVERKRGFVKTVDFISLLIHILSSNSKTCSSLQFLLN 119

Query: 166 --------------------LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
                                  R G E     F+YL+ ++ R  K+ +A+     M + 
Sbjct: 120 NYVFGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEH 179

Query: 206 AVAPNLLICNTAIHVLVVGN-----------------------------------KLAKA 230
            + P + I N  +  +V  N                                   K  + 
Sbjct: 180 DLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEV 239

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
            +F +  +  G+  +   Y+ L++  C    +  A +L+ EM   G  P K +Y  V+  
Sbjct: 240 EKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVA 299

Query: 291 LCKEKRIKEVRDLMEKMVN---DSNLFHDQ---------GRIEEAKELVNQMSQMGCIPD 338
             K+    E   L ++MV+     N+   +         G +  A +L +++ + G +PD
Sbjct: 300 CVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPD 359

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           VV ++ ++NG  +VG++++A ++  +M   G +PN     + L G  H    LE    + 
Sbjct: 360 VVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGF-HEQNLLEHAYGLF 418

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
               E    N +TY++++  L   GK++EAC++  +MV KG  P+ V  N LI   C++G
Sbjct: 419 DEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKG 478

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
            MD A   ++  L +G   N V +T LI GF +KGD E A  + + M      P   T+ 
Sbjct: 479 CMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFN 538

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           T+I+ L K GRV E  + +   + +G V T +TY ++I  + + G V+  L     +  +
Sbjct: 539 TVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSAL-----LAYR 593

Query: 579 QKCRTA-------YNQVIENLC 593
           + C +        Y  +I+ LC
Sbjct: 594 EMCESGISPDVITYTSLIDGLC 615



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 204/447 (45%), Gaps = 48/447 (10%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS L+   S+ G +  A  + + M+   + PN+ I N+ +      N L  A    +   
Sbjct: 363 FSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAV 422

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT-VMGYL---CKE 294
             GIT NV+TYN L+K   +L ++ +A  L ++M  KG +P  VSY   ++G+    C +
Sbjct: 423 EHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMD 481

Query: 295 KRIKEVRDLMEKMV-----------------NDS-------------------------- 311
           K    ++ ++E+ +                  DS                          
Sbjct: 482 KAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVI 541

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           N     GR+ E ++ +N   + G +   +TY ++++GF + G +D A    ++M   G  
Sbjct: 542 NGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGIS 601

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+ ++YT+ ++GLC + K   A EM +  + +    + + YS ++ G  +   +  A   
Sbjct: 602 PDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKF 661

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             E++  G  P  V  N +I        M+ A    QE +      ++  +TS+I G  +
Sbjct: 662 FTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLK 721

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           +G L  AL L  +M      PD V YT +I+ LS NG++E A++++ +M    + P+V+ 
Sbjct: 722 EGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLV 781

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           Y  +I    + G +++  +L ++ML K
Sbjct: 782 YNILIAGNFREGNLQEAFRLHDEMLDK 808



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 181/400 (45%), Gaps = 18/400 (4%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            ++ L+      GK+  A  +   M    + P+L+  N  I        + KA   L+ +
Sbjct: 431 TYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSI 490

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G+ PN +TY  LI G+      + A  + ++M     +P   ++ TV+  L K  R+
Sbjct: 491 LERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRV 550

Query: 298 KEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            E +D +   +    +            F  +G ++ A     +M + G  PDV+TYT++
Sbjct: 551 SETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSL 610

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++G C+  ++  A +M   M + G K + V+Y+A ++G C       A +      +   
Sbjct: 611 IDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGL 670

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL---LIQSLCREGKMDG 462
           TPN + Y+ ++ G      +  A ++ +EM+K      P ++ +   +I  L +EGK+  
Sbjct: 671 TPNTVVYNSMISGFIHLNNMEAALNLHQEMIKN---KVPCDLQVYTSIIGGLLKEGKLSL 727

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A     E L+K    ++V +T LI G    G LE A  +L +M      P  + Y  +I 
Sbjct: 728 ALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIA 787

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
              + G ++EA  L  +ML KGLVP   TY  +++   +V
Sbjct: 788 GNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKV 827



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 169/365 (46%), Gaps = 25/365 (6%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +L+ +  RG++     ++ L+  + + G    A  V   M  A +AP     NT I+
Sbjct: 483 AYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVIN 542

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    ++++    L      G     +TYN +I G+     +  A+    EM   G SP
Sbjct: 543 GLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISP 602

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D ++Y +++  LCK  +I                         A E+ + M   G   DV
Sbjct: 603 DVITYTSLIDGLCKSNKIGL-----------------------ALEMHSDMKYKGMKLDV 639

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
           V Y+A+++GFC++ +++ A K   ++   G  PNTV Y + ++G  H   ++EA   ++ 
Sbjct: 640 VAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHL-NNMEAALNLHQ 698

Query: 400 SEEEWWTP-NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
              +   P +   Y+ ++ GL +EGKLS A D+  EM+ K   P  V   +LI  L   G
Sbjct: 699 EMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNG 758

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           +++ A K ++E        +V+ +  LI G  ++G+L+EA  L D+M      PD  TY 
Sbjct: 759 QLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYD 818

Query: 519 TIIDA 523
            +++ 
Sbjct: 819 ILVNG 823



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 173/403 (42%), Gaps = 36/403 (8%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           +I +A E    M +   +P V     ++    R   +  A+++  +M   G   +  +  
Sbjct: 165 KITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLH 224

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             +      GK  E  +    ++      +A  YS+++  + R   L+ AC++++EM + 
Sbjct: 225 VVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREF 284

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G+ P+      +I +  ++G    A +   E ++ G  +NV+   SL++G+C  GD+  A
Sbjct: 285 GWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLA 344

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP----------- 547
           L L D++      PD V ++ +I+  SK G +E+A EL  +M   G+ P           
Sbjct: 345 LQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEG 404

Query: 548 -----------------------TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCR 582
                                   VVTY  ++    ++G+V +   L EKM+SK      
Sbjct: 405 FHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSL 464

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
            +YN +I   C  G +++A  +L  +L    K +A T  +L++ +  KG    A+ V  +
Sbjct: 465 VSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQ 524

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ 685
           M   N+ P       V   L   G+  E    +  F+++G + 
Sbjct: 525 MMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVS 567



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 147/324 (45%), Gaps = 10/324 (3%)

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           +G + ++  +   L       K  +A E   T  E    P     + ++  + R   + +
Sbjct: 144 YGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCD 203

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +  EMV++G +     +++++++  +EGK +  +KF +E   +G  V+   ++ L++
Sbjct: 204 ARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQ 263

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
             C++ DL  A  LL +M      P   TYT +I A  K G   EA  L  +M+S GL  
Sbjct: 264 AVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPM 323

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC-RTAYNQVIENLCS-FGYLEEAGKIL 605
            V+  R+++  YC +G V   L+L ++++            V+ N CS  G +E+A ++ 
Sbjct: 324 NVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELY 383

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKV---ACRMFNRNLIPDLKLCKKVSERL 662
            ++     + +    + L+E +  + +   AY +   A      N++    L K + E  
Sbjct: 384 TRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGEL- 442

Query: 663 ILEGKSEEADTLMLRFVERGHIQP 686
              GK  EA  L  + V +G I P
Sbjct: 443 ---GKVNEACNLWEKMVSKG-ITP 462



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 70/145 (48%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + +VY  M+         + A  + + M +  + C  + ++ ++    + GKL  A+ + 
Sbjct: 673 NTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLY 732

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S M    + P++++    I+ L    +L  A + L+ M    ITP+VL YN LI G    
Sbjct: 733 SEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFRE 792

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSY 284
             +++A +L DEM  KG  PD  +Y
Sbjct: 793 GNLQEAFRLHDEMLDKGLVPDDTTY 817



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 12/225 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  +++ L K+     A  +   M  +G++    A+S L+  + +   + +A    
Sbjct: 603 DVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFF 662

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           + +    + PN ++ N+ I   +  N +  AL   + M    +  ++  Y  +I G    
Sbjct: 663 TELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKE 722

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFH 315
            ++  A+ L  EM  K   PD V Y  ++  L    +++    ++++M    +  S L +
Sbjct: 723 GKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVY 782

Query: 316 D--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
           +        +G ++EA  L ++M   G +PD  TY  +VNG  +V
Sbjct: 783 NILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKV 827


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 214/438 (48%), Gaps = 20/438 (4%)

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER---MQLAGITPNVLTY 249
           R+A++ L +    A++  LL  +T++   V  N+   A +  +          + +V TY
Sbjct: 83  RHALHSLLLRPNPALSKPLL--DTSLAAYVHANQPHLAFQLFQNELIXXXXXXSIDVWTY 140

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           N L+KG CD  +I +AI++ DEM      PD V+Y T++    K +   E   L+E+M +
Sbjct: 141 NTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKS 200

Query: 310 DSNL-------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
              +             F  +G+I EA + V +M + G  PD  TY  ++NGFC+ G+L 
Sbjct: 201 RGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLG 260

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A +M+ +M   G KP+  +    L+ LC   K  EA E+   + +  +  + +TY  ++
Sbjct: 261 EAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLI 320

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            G  +  +  +A  +  EM K+G  P+ V  N LI+ LC  GK D A   + E L KG  
Sbjct: 321 MGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLV 380

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            + V+   +I G+C +G +++A    + M      PD  T   ++  L +   +E+A +L
Sbjct: 381 PDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKL 440

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCS 594
               +SK     VVTY T+I   C+ GR+++   L+  M  K  +  +  YN ++  L  
Sbjct: 441 FNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTH 500

Query: 595 FGYLEEAGKILGKVLRTA 612
            G  EEA K + K+  T 
Sbjct: 501 AGRTEEAEKFMSKLSETG 518



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 208/430 (48%), Gaps = 44/430 (10%)

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           M  +  V PN +  N  +       K+ +A   + +M  +G++P+  TYN +I G+C   
Sbjct: 198 MKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAG 257

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
           ++ +A +++DEM  KG  PD  +  T++  LC EK+                        
Sbjct: 258 KLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKP----------------------- 294

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           EEA EL  +  + G I D VTY  ++ G+ +  + D+A K+ ++M   G  P+ VSY   
Sbjct: 295 EEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPL 354

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           + GLC +GK+ +A + +N   E+   P+ ++ ++++HG   EG + +A     +MV   F
Sbjct: 355 IRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSF 414

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P     N+L++ LCR   ++ A K     ++K  +V+VV + ++I   C++G L+EA  
Sbjct: 415 KPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFD 474

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L+ DM + K +PD  TY  I+ AL+  GR EEA + M K+   G                
Sbjct: 475 LMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETG---------------- 518

Query: 561 QVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
           Q  +  D  + L+           Y+Q I +LC+ G  +EA K+  +  +     +  T 
Sbjct: 519 QAVKTHDTSQELD-----ASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTY 573

Query: 621 HVLVESYLNK 630
             L++ +L +
Sbjct: 574 IKLMDGFLKR 583



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 182/371 (49%), Gaps = 3/371 (0%)

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG-CKPNT 374
           D+G+I+EA  + ++M  +  IPDVVTY  +++G  +     +  ++L++M   G  +PN 
Sbjct: 149 DEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNA 208

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V++   +      GK  EA + +    E   +P+  TY+ +++G  + GKL EA  ++ E
Sbjct: 209 VTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDE 268

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M +KG  P    +N ++ +LC E K + A +   +   +G  ++ V + +LI G+ +   
Sbjct: 269 MARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQ 328

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
            ++AL L ++M      P  V+Y  +I  L  +G+ ++A + + ++L KGLVP  V+   
Sbjct: 329 EDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNI 388

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTA 612
           +IH YC  G V+   +   KM+        +  N ++  LC    LE+A K+    +   
Sbjct: 389 IIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQ 448

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
           +  D  T + ++     +G    A+ +   M  +   PD      +   L   G++EEA+
Sbjct: 449 NSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAE 508

Query: 673 TLMLRFVERGH 683
             M +  E G 
Sbjct: 509 KFMSKLSETGQ 519



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 182/401 (45%), Gaps = 39/401 (9%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           + + + +M++   K      A   +  M   G+   P+ F+Y  ++  + +AGKL  A  
Sbjct: 207 NAVTHNIMVKWFGKEGKINEASDAVVKMVESGVS--PDCFTYNTMINGFCKAGKLGEAFR 264

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           ++  M +  + P++   NT +H L +  K  +A     + +  G   + +TY  LI GY 
Sbjct: 265 MMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYF 324

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              +   A+KL +EM  +G  P  VSY  ++  LC                         
Sbjct: 325 KGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCL-----------------------S 361

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
           G+ ++A + +N++ + G +PD V+   +++G+C  G +D+A +   +M  +  KP+  + 
Sbjct: 362 GKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTR 421

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              L GLC      +A ++ N+   +  + + +TY+ ++  L +EG+L EA D++ +M  
Sbjct: 422 NILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEV 481

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV------------VNFTSL 485
           K F P     N ++++L   G+ + A+KFM +    G AV              + ++  
Sbjct: 482 KKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQ 541

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           I   C +G  +EA+ L  +        +  TY  ++D   K
Sbjct: 542 ISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLK 582



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 139/280 (49%), Gaps = 3/280 (1%)

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y   + GLC  GK  EA  + +  E     P+ +TY+ ++ G  +    +E   ++ EM
Sbjct: 139 TYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEM 198

Query: 436 VKKGFF-PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
             +G   P  V  N++++   +EGK++ A   + + +  G + +   + ++I GFC+ G 
Sbjct: 199 KSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGK 258

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           L EA  ++D+M      PD  T  T++  L    + EEA EL +K   +G +   VTY T
Sbjct: 259 LGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGT 318

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I  Y +  + +  LKL E+M  +    +  +YN +I  LC  G  ++A   L ++L   
Sbjct: 319 LIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKG 378

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
              D  +C++++  Y  +G+   A++   +M   +  PD+
Sbjct: 379 LVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDI 418



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 136/308 (44%), Gaps = 36/308 (11%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R+  Y  D + Y  ++    K K    A ++   M +RGI     +++ L+     +GK 
Sbjct: 305 RKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKT 364

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A+  L+ + +  + P+ + CN  IH       + KA +F  +M      P++ T N L
Sbjct: 365 DQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNIL 424

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           ++G C +  ++ A KL +    K  S D V+Y T++ YLCKE R+ E  DLM  M     
Sbjct: 425 LRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDM----- 479

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                    E K+           PD  TY A+V      G  ++A+K + ++   G   
Sbjct: 480 ---------EVKKFE---------PDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAV 521

Query: 373 NT------------VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG-L 419
            T            + Y+  ++ LC  GK  EA ++   SE++  + N  TY  +M G L
Sbjct: 522 KTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFL 581

Query: 420 RREGKLSE 427
           +R   +S+
Sbjct: 582 KRRKSISK 589



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 42/214 (19%)

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
           +++V  + +L++G C +G ++EA+ + D+M   K  PD VTY T+ID   K     E   
Sbjct: 134 SIDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFR 193

Query: 536 LMMKMLSKGLV-PTVVTYRTVIHRYCQVGRVED----LLKLLEKMLSKQKCRTAYNQVIE 590
           L+ +M S+G V P  VT+  ++  + + G++ +    ++K++E  +S   C T YN +I 
Sbjct: 194 LLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPD-CFT-YNTMIN 251

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
             C  G L EA +++ ++ R   K D  T + ++ +                        
Sbjct: 252 GFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHT------------------------ 287

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
                      L +E K EEA  L ++  +RG+I
Sbjct: 288 -----------LCMEKKPEEAYELTVKARKRGYI 310


>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
 gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
          Length = 347

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 179/345 (51%), Gaps = 25/345 (7%)

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
           +KL+DEM  KGC+PD ++Y  V+  +C+E                       GR+++A E
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLNGICQE-----------------------GRVDDAME 37

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
            +  +   G  P+ V+Y  V+ G       + A+K++++M H GC PN V++   ++ LC
Sbjct: 38  FLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLC 97

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
             G    A E++    +   TPN+++Y+ ++H   ++ K+ +A   V  MV +G +P  V
Sbjct: 98  RRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIV 157

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N L+ +LCR G++D A   + +   KGC+  ++++ ++I G  + G  +EAL LLD+M
Sbjct: 158 SYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEM 217

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 PD +TYTTI   L +  ++EEA     K+   G+ PTVV Y  ++   C+    
Sbjct: 218 ISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRET 277

Query: 566 EDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
            + + L   M+S       + Y  ++E L   G ++EA  +LG++
Sbjct: 278 HNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQL 322



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 187/351 (53%), Gaps = 23/351 (6%)

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           M +L  M+    AP+++  N  ++ +    ++  A+ FLE +   G  PN ++YN ++KG
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
                R +DA KL++EM  KGC P+ V++  ++ +LC+                      
Sbjct: 61  LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCR---------------------- 98

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
            +G +E A E++ Q+ + GC P+ ++Y  +++ FC+  ++D+A   ++ M   GC P+ V
Sbjct: 99  -RGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIV 157

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           SY   L  LC NG+   A ++++  + +  +P  I+Y+ V+ GL + GK  EA +++ EM
Sbjct: 158 SYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEM 217

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           + KG  P  +    +   LCRE K++ A +   +  + G    VV + +++ G C++ + 
Sbjct: 218 ISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRET 277

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
             A+ L   M      P+  TYT +++ L+  G V+EA +L+ ++ S+G+V
Sbjct: 278 HNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVV 328



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 193/347 (55%), Gaps = 4/347 (1%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +L+++M   GC PD++TY  V+NG C+ G +D A + L+ +  +G +PNTVSY   L GL
Sbjct: 2   KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
               +  +A +++     +   PN +T+++++  L R G +  A +V+ ++ K G  P  
Sbjct: 62  FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           +  N L+ + C++ KMD A  F++  +++GC  ++V++ +L+   C+ G+++ A+ LL  
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           +      P  ++Y T+ID L+K G+ +EA EL+ +M+SKGL P ++TY T+    C+  +
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDK 241

Query: 565 VEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           +E+ ++   K+  +  +     YN ++  LC       A  +   ++      + ST  +
Sbjct: 242 IEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTI 301

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
           LVE    +G+   A  +  ++ +R ++ + K  KK + ++ L+G ++
Sbjct: 302 LVEGLAYEGLVKEARDLLGQLCSRGVV-NKKFMKKGAVKM-LDGPTQ 346



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 150/305 (49%), Gaps = 25/305 (8%)

Query: 137 YRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
           Y  +P  + Y ++L+ L   +  + A++++  MA +G       F+ L+    R G +  
Sbjct: 45  YGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEP 104

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           AM VL  + K    PN L  N  +H      K+ KA+ F+E M   G  P++++YN L+ 
Sbjct: 105 AMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLT 164

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
             C    +  AI L+ ++  KGCSP  +SY TV+  L K                     
Sbjct: 165 ALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTK--------------------- 203

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G+ +EA EL+++M   G  PD++TYT + +G CR  ++++A +   ++   G +P  
Sbjct: 204 --AGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTV 261

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V Y A L GLC   ++  A ++ +        PN  TY++++ GL  EG + EA D++ +
Sbjct: 262 VLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQ 321

Query: 435 MVKKG 439
           +  +G
Sbjct: 322 LCSRG 326



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 122/244 (50%), Gaps = 4/244 (1%)

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           ++ EM  KG  P  +  N+++  +C+EG++D A +F++   + G   N V++  +++G  
Sbjct: 3   LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLF 62

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
                E+A  L+++M      P+ VT+  +I  L + G VE A E++ ++   G  P  +
Sbjct: 63  TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSL 122

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGK 607
           +Y  ++H +C+  +++  +  +E M+S+  C     +YN ++  LC  G ++ A  +L +
Sbjct: 123 SYNPLLHAFCKQKKMDKAMAFVELMVSR-GCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +          + + +++     G    A ++   M ++ L PD+     ++  L  E K
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDK 241

Query: 668 SEEA 671
            EEA
Sbjct: 242 IEEA 245


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 220/473 (46%), Gaps = 26/473 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y +M++ L +      A  +L  + R GI+     ++ LM A  R+G++  A  + 
Sbjct: 215 DVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLK 274

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  + P+++     I+ L  G +  +    L+ M+  GITPN + YN LI  +C  
Sbjct: 275 GRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCRE 334

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
               +A++L DEM  KG     V+Y  +   LCKE                       G 
Sbjct: 335 GHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKE-----------------------GE 371

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR-VGELDQAKKMLQQMYHHGCKPNTVSYT 378
           +E A++++++M   G       + +VV    R  G LD   +++++M     KPN    T
Sbjct: 372 MEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMT 431

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           A +  LC  GK  EA E+      +    N  T + ++HGL +   + EA  V++ MV  
Sbjct: 432 ACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDS 491

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G     +  N++IQ  C+  KM+ A +   + + +G   ++  F + +R +C  G +E+ 
Sbjct: 492 GVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDI 551

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           L LLD M      PD VTY TIID   K   V +A + +++++  GL P  V Y  +I  
Sbjct: 552 LHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGG 611

Query: 559 YCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           Y + G + D + +L+ M     Q     YN ++  +C  G +EEA +I  + +
Sbjct: 612 YGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCI 664



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 214/437 (48%), Gaps = 24/437 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA-GKLRNAMYVLS 200
           + Y ++ + L K    + A+++L  M   G+      F+ ++  + R  G+L   + ++ 
Sbjct: 357 VTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIR 416

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M    + PN  +    I  L    K  +A      +   G+  N+ T N LI G C  +
Sbjct: 417 EMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGN 476

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
            +K+A K++  M   G   D+++Y  ++ + CK  ++                       
Sbjct: 477 NMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKM----------------------- 513

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           EEA +L + M + G  PD+ T+   +  +C +G+++    +L QM   G KP+ V+Y   
Sbjct: 514 EEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTI 573

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++G C      +A + +    +    PNA+ Y+ ++ G  R G +S+A  V+  M   G 
Sbjct: 574 IDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGI 633

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            PTP+  N L+  +C  G ++ AK+   +C+ K   + V+ +T +I+GFC+ G ++EA+ 
Sbjct: 634 QPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVM 693

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
              +M+     P+ +TYTT++ A  K G  EEA +L  +M+S G+VP  V+Y T+I   C
Sbjct: 694 YFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCC 753

Query: 561 QVGRVEDLLKLLEKMLS 577
           +V  ++ +++   +M S
Sbjct: 754 EVDSLDKIVESPAEMSS 770



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 212/469 (45%), Gaps = 27/469 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA-AVAPNLLICNTAIHVLVVGN 225
           ++ RG     +  + L+ A    G+L  A  V   M+   AVAP++      I  L    
Sbjct: 171 LSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAG 230

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           ++  A   L  ++ +GI P V+TYN L+   C   R+++A +L   M      P  V++ 
Sbjct: 231 EIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFG 290

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            ++  L + +R  EV  +++                       +M   G  P+ V Y  +
Sbjct: 291 ILINGLARGQRFGEVDAVLQ-----------------------EMEGFGITPNEVIYNQL 327

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           +   CR G   +A ++  +M   G K   V+Y      LC  G+   A ++++       
Sbjct: 328 IGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGM 387

Query: 406 TPNAITY-SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
           T +   + SVV   LR  G+L     ++REMV +   P    +   IQ LC+ GK + A 
Sbjct: 388 TVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAA 447

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           +     L KG  VN+    +LI G CQ  +++EA  +L  M     + D +TY  +I   
Sbjct: 448 EIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFC 507

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCR 582
            K  ++EEA +L   M+ +G  P + T+ T +  YC +G+VED+L LL++M S+  +   
Sbjct: 508 CKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDI 567

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
             Y  +I+  C    + +A K L ++++   + +A   + L+  Y   G
Sbjct: 568 VTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNG 616



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 113/478 (23%), Positives = 199/478 (41%), Gaps = 52/478 (10%)

Query: 175 RPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           RP    F  L+   +R  +      VL  M+   + PN +I N  I         ++ALR
Sbjct: 283 RPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALR 342

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG----CS---------- 278
             + M   GI   V+TYN + K  C    ++ A +++DEM L G    CS          
Sbjct: 343 LFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHL 402

Query: 279 ----------------------PDKVSYYTVMGYLCKEKRIKEV---------RDLMEKM 307
                                 P+       +  LCK  + +E          + L   +
Sbjct: 403 RGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNI 462

Query: 308 VNDSNLFHD--QGR-IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
              + L H   QG  ++EA +++  M   G   D +TY  ++   C+  ++++A ++   
Sbjct: 463 ATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDD 522

Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
           M   G KP+  ++  FL   C+ GK  +   +++  + E   P+ +TY  ++ G  +   
Sbjct: 523 MIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 582

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           + +A   + E++K G  P  V  N LI    R G +  A   +    + G     + + S
Sbjct: 583 VHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNS 642

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L+   C  G +EEA  +     L   +   + YT II    K G+++EA     +M  + 
Sbjct: 643 LMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRD 702

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEE 600
           + P  +TY T+++ YC+ G  E+  KL ++M+S        +YN +I   C    L++
Sbjct: 703 IRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDK 760



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 138/300 (46%), Gaps = 41/300 (13%)

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV--NVV 480
           G LS A D   E+  +G  P+    N+L+++L   G++D A+K   E +  G AV  +V 
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGE-MRDGNAVAPDVY 217

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            +T +I+  C+ G+++ A  +L ++      P  VTY  ++DAL ++GRVEEA +L  +M
Sbjct: 218 TYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRM 277

Query: 541 LSKGLVPTVVT-----------------------------------YRTVIHRYCQVGRV 565
           +   L P++VT                                   Y  +I  +C+ G  
Sbjct: 278 VEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHC 337

Query: 566 EDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
            + L+L ++M+SK  ++    YN + + LC  G +E A +IL ++L        S  + +
Sbjct: 338 SEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSV 397

Query: 624 VESYL-NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           V  +L   G   +  ++   M  R L P+  +     + L   GK EEA  +    + +G
Sbjct: 398 VAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKG 457



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 2/133 (1%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           PI Y  ++  +    L + AK +      + IE     ++ ++  + + GK+  A+    
Sbjct: 637 PITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFK 696

Query: 201 MMQKAAVAPNLLICNTAIHVLV-VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
            M    + PN +   T ++     GNK  +A +  + M  +GI P+ ++YN LI G C++
Sbjct: 697 EMHYRDIRPNKMTYTTLMYAYCKCGNK-EEAFKLFDEMVSSGIVPDTVSYNTLISGCCEV 755

Query: 260 HRIKDAIKLIDEM 272
             +   ++   EM
Sbjct: 756 DSLDKIVESPAEM 768


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 229/481 (47%), Gaps = 34/481 (7%)

Query: 151 LSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           L +  L   A+ ++  M   G     ++   L+  + ++G  +     L  M +A + PN
Sbjct: 4   LVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPN 63

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
            ++ N  I  L     LA+A  +L+RM      PNV++YN +I GYC    I+ A+  + 
Sbjct: 64  AILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKALAFLR 122

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQM 330
           EM   G  P   +Y +++   CK                        G + +A ++  +M
Sbjct: 123 EMEELGHPPTPHAYSSIVQSFCK-----------------------TGNVSKAMDVFAEM 159

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
              GC PD+V +  +++G  R  ++ +A+++ + M   GCKP+ V+Y   + GLC   K 
Sbjct: 160 PAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKL 219

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV----- 445
            EA  ++   ++E  +P  +TY+ ++  L +  +L +A +V  +M +    P P      
Sbjct: 220 DEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEG---PCPCTEPAY 276

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
            + +LI  LC+  +   AK+  QE   +G +  VV + +L+ G      L++A+ L   M
Sbjct: 277 SVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFM 336

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P+  TY  +I +L K  +VEEA +L+  M  KG VP++  +  ++ R  + GR+
Sbjct: 337 LDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRL 396

Query: 566 EDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           +D  +L ++M  ++ Q+   + N +++ +   G ++EA   L ++  T    D  T   L
Sbjct: 397 DDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKL 456

Query: 624 V 624
           V
Sbjct: 457 V 457



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 224/480 (46%), Gaps = 15/480 (3%)

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I  LV  + +A+A   +E M+ AG +P+V ++  LI+G+      +     +D M   G 
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-------VNDSNLFHD----QGRIEEAKEL 326
            P+ + Y  ++  LCK   + E    +++M       V   N+  D       IE+A   
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAF 120

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           + +M ++G  P    Y+++V  FC+ G + +A  +  +M   GC+P+ V++   L+GL  
Sbjct: 121 LREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWR 180

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
             K  EARE+  +       P+ +TY+ ++ GL +  KL EA  ++  M ++   PT V 
Sbjct: 181 ARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVT 240

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS--LIRGFCQKGDLEEALSLLDD 504
              LI  LC+  ++  A +  ++     C      ++   LI G C+     EA  +  +
Sbjct: 241 YTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQE 300

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      P  VTY T+++ L    ++++A EL   ML +   P + TY  +I   C+  +
Sbjct: 301 MRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQ 360

Query: 565 VEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           VE+  KLL  M  K    +   +  ++  L   G L++A ++  ++ R   +    + ++
Sbjct: 361 VEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNI 420

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           L++  L +G    A     +M +  ++PD     K+   L  +GK+++A  L+   V  G
Sbjct: 421 LLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 184/403 (45%), Gaps = 21/403 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y ++++   K +  + A   LR M   G    P A+S ++ ++ + G +  AM V + 
Sbjct: 99  VSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAE 158

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M      P+++  N  +  L    K+ +A      M   G  P+V+TYN +I G C   +
Sbjct: 159 MPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKK 218

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           + +A+ L++ M  +  SP  V+Y T++ +LCK  R+++  ++ EKM              
Sbjct: 219 LDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAE------------ 266

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
                        C     +   ++NG C+     +AK+M Q+M   G  P  V+Y   L
Sbjct: 267 ---------GPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLL 317

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
            GL    K  +A E+     ++   PN  TY +++  L +  ++ EA  ++  M  KGF 
Sbjct: 318 EGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFV 377

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P+     +L+  L R G++D A +  +E     C   V +   L+ G  ++G ++EA   
Sbjct: 378 PSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDF 437

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           L  M      PD  TY  ++  L   G+ ++A +L+ +++  G
Sbjct: 438 LKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 163/367 (44%), Gaps = 25/367 (6%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           P  Y  +++   KT     A  V   M  +G E     F+ L+    RA K+  A  +  
Sbjct: 133 PHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFR 192

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M      P+++  NT I  L    KL +A+  LERM+   ++P  +TY  LI   C   
Sbjct: 193 SMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFA 252

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYT--VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
           R++ A ++ ++M    C   + +Y    ++  LCK +R                      
Sbjct: 253 RLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPG-------------------- 292

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
              EAKE+  +M   G  P VVTY  ++ G     +L  A ++   M      PN  +Y 
Sbjct: 293 ---EAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYE 349

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++ LC   +  EA ++++   ++ + P+   + V++  L R G+L +A ++ +EM + 
Sbjct: 350 ILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRI 409

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
                    N+L+  + R G +D AK F+++  + G   +   +  L+ G C +G  ++A
Sbjct: 410 NCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQA 469

Query: 499 LSLLDDM 505
             L++++
Sbjct: 470 RKLVEEL 476



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 147/313 (46%), Gaps = 61/313 (19%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + + ++L  L + +    A+ + R M  RG  C+P+  +Y  ++    +  KL  A++
Sbjct: 167 DIVNFNVLLSGLWRARKIHEARELFRSMNSRG--CKPDVVTYNTMIAGLCKWKKLDEAVF 224

Query: 198 VLSMMQKAAVAPNLLICNT-------------------------------AIHVLVVGNK 226
           +L  M++  V+P  +   T                               A  VL++ N 
Sbjct: 225 LLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILING 284

Query: 227 LAKALR------FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL----IDEMPLKG 276
           L KA R        + M+  GI+P V+TYN L++G     +++DA++L    +D++P   
Sbjct: 285 LCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVP--- 341

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAK 324
            +P+  +Y  ++  LCK  +++E   L+  M +   +                GR+++A 
Sbjct: 342 -APNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAF 400

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           EL  +MS++ C   V +   +++G  R G +D+AK  L+QM   G  P+  +Y   + GL
Sbjct: 401 ELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGL 460

Query: 385 CHNGKSLEAREMI 397
           C  GK+ +AR+++
Sbjct: 461 CWQGKADQARKLV 473


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 238/510 (46%), Gaps = 58/510 (11%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           +  ++ +Y ++  L  ++   + M      P     N  +  +V  +   +   F    +
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
            + +  +V ++  LIKG C+   I+ +  L+ E+   G SP+ V Y T++   CK     
Sbjct: 157 -SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK----- 210

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                             +G IE+AK+L  +M ++G + +  TYT ++NG  + G   Q 
Sbjct: 211 ------------------KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
            +M ++M   G  PN  +Y   +N LC +G++ +A ++ +   E   + N +TY+ ++ G
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L RE KL+EA  VV +M   G  P  +  N LI   C  GK+  A    ++  ++G + +
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           +V +  L+ GFC+KGD   A  ++ +M      P  VTYT +ID  +++  +E+A +L +
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432

Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYL 598
            M   GLVP V TY  +IH +C  G++ +  +L + M+ K  C    N+VI N    GY 
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN-CEP--NEVIYNTMILGYC 489

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           +E                              G    A K+   M  + L P++   + +
Sbjct: 490 KE------------------------------GSSYRALKLLKEMEEKELAPNVASYRYM 519

Query: 659 SERLILEGKSEEADTLMLRFVERGHIQPKS 688
            E L  E KS+EA+ L+ + ++ G I P +
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSG-IDPST 548



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 189/399 (47%), Gaps = 23/399 (5%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +F  L+     AG++  +  +L  + +   +PN++I  T I       ++ KA      M
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G+  N  TY  LI G       K   ++ ++M   G  P+  +Y  VM  LCK+   
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD--- 281

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                               GR ++A ++ ++M + G   ++VTY  ++ G CR  +L++
Sbjct: 282 --------------------GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNE 321

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A K++ QM   G  PN ++Y   ++G C  GK  +A  +    +    +P+ +TY++++ 
Sbjct: 322 ANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS 381

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  R+G  S A  +V+EM ++G  P+ V   +LI +  R   M+ A +        G   
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +V  ++ LI GFC KG + EA  L   M     +P+ V Y T+I    K G    A +L+
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
            +M  K L P V +YR +I   C+  + ++  +L+EKM+
Sbjct: 502 KEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 148/308 (48%), Gaps = 23/308 (7%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  ++  L K    + A +V   M  RG+ C    ++ L+    R  KL  A  V+  M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329

Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
           +   + PNL+  NT I       KL KAL     ++  G++P+++TYN L+ G+C     
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
             A K++ EM  +G  P KV+Y  ++                       + F     +E+
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILI-----------------------DTFARSDNMEK 426

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A +L   M ++G +PDV TY+ +++GFC  G++++A ++ + M    C+PN V Y   + 
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
           G C  G S  A +++   EE+   PN  +Y  ++  L +E K  EA  +V +M+  G  P
Sbjct: 487 GYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546

Query: 443 TPVEINLL 450
           +   ++L+
Sbjct: 547 STSILSLI 554



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 87/169 (51%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y +++    +     GA ++++ M  RGI+     ++ L+  ++R+  +  A+ +   
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M++  + P++   +  IH   +  ++ +A R  + M      PN + YN +I GYC    
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
              A+KL+ EM  K  +P+  SY  ++  LCKE++ KE   L+EKM++ 
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542



 Score = 39.7 bits (91), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 48/101 (47%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A R+ + M  +  E     ++ +++ Y + G    A+ +L  M++  +APN+      I 
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
           VL    K  +A R +E+M  +GI P+    + + +   D H
Sbjct: 522 VLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKNDSH 562


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 233/503 (46%), Gaps = 38/503 (7%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           A + L+    R+G    A  +L  +       +   CN  +  L    +  K    + +M
Sbjct: 119 ALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKM 178

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG--------CSPDKVSYYTVMG 289
           +   I P V+T+  LI   C   RI DA+++ ++M  KG         +PD + Y T++ 
Sbjct: 179 KDMNIQPTVITFGILINHLCKFRRIDDALEVFEKM--KGEKEETKVFVAPDTIMYNTLID 236

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            LCK                        GR EEA  L+ +M    C P   T+  ++NG+
Sbjct: 237 GLCK-----------------------VGRQEEALCLMGKMRSDQCAPTTATFNCLINGY 273

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           CR GE++ A K+  +M +   +PN ++    ++G+C + +   A E     +++    N 
Sbjct: 274 CRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNN 333

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           +TY+V ++       +++A + + EM K G FP  V    LI  L + G++D A   + +
Sbjct: 334 VTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSK 393

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
               G  ++ V +  LI  FC+K  L+ A   L++M L    PD+VTY T+I   SK G 
Sbjct: 394 LKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGN 453

Query: 530 VEEATELMMKML-SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM---LSKQKCRTA- 584
            + A + M KM   +GL PTV TY  +IH YC    +++ +K+ ++M    SK    T  
Sbjct: 454 FKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVI 513

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN +I++LC    +  A  +L  +       + +T + + ++  +K     A+K+  RM 
Sbjct: 514 YNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMV 573

Query: 645 NRNLIPDLKLCKKVSERLILEGK 667
            +   PD    + ++E L   G+
Sbjct: 574 EQACNPDYITMEILTEWLSAVGE 596



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 202/437 (46%), Gaps = 21/437 (4%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ------KAAVAPNLLICNT 216
           ++R M    I+     F  L+    +  ++ +A+ V   M+      K  VAP+ ++ NT
Sbjct: 174 LMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNT 233

Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
            I  L    +  +AL  + +M+     P   T+NCLI GYC    I+ A KL +EM    
Sbjct: 234 LIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQ 293

Query: 277 CSPDKVSYYTVMGYLCKEKRIKEV----RDLMEKMVNDSNL--------FHDQGRIEEAK 324
             P+ ++  T++  +CK  RI       R + +K +  +N+        F +   + +A 
Sbjct: 294 IEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAM 353

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           E +++MS+ GC PD V Y  ++ G  + G LD A  ++ ++   G   + V Y   ++  
Sbjct: 354 EFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEF 413

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK-GFFPT 443
           C   K   A+E +N  E     P+++TY+ ++    + G    A   +++M ++ G  PT
Sbjct: 414 CKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPT 473

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV--NVVNFTSLIRGFCQKGDLEEALSL 501
                 LI + C    +D A K  +E  N    V  N V +  LI   C++  +  ALSL
Sbjct: 474 VFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSL 533

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           LDDM      P+T TY +I  AL     +++A +LM +M+ +   P  +T   +      
Sbjct: 534 LDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSA 593

Query: 562 VGRVEDLLKLLEKMLSK 578
           VG +  L K  +  +++
Sbjct: 594 VGEITKLKKFTQGCMNR 610



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 144/316 (45%), Gaps = 24/316 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A    R+M ++G++     ++  + A+     +  AM  L  M K    P+ ++  T I 
Sbjct: 317 AVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLIC 376

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            L    +L  A   + +++ AG   + + YN LI  +C  +++  A + ++EM L G  P
Sbjct: 377 GLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKP 436

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D V+Y T++ Y  K    K     M+KM  +                       G  P V
Sbjct: 437 DSVTYNTLISYFSKIGNFKLAHKFMKKMTEEE----------------------GLSPTV 474

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK--PNTVSYTAFLNGLCHNGKSLEAREMI 397
            TY A+++ +C    +D+A K+ ++M +   K  PNTV Y   ++ LC   +   A  ++
Sbjct: 475 FTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLL 534

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +  +     PN  TY+ +   LR +  L +A  ++  MV++   P  + + +L + L   
Sbjct: 535 DDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAV 594

Query: 458 GKMDGAKKFMQECLNK 473
           G++   KKF Q C+N+
Sbjct: 595 GEITKLKKFTQGCMNR 610



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 116/254 (45%), Gaps = 16/254 (6%)

Query: 415 VMHGLRREGKLSEACDVVREMV--KKGFFPTPVEINLLIQSLCREGKMDGAKK------F 466
           +++ L + G++  A +V+ EM+  +  F P      ++  +L +   ++G  K       
Sbjct: 45  IINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGL 104

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           + +        + +  T LI   C+ G+   A ++LD++ +     D      ++  L K
Sbjct: 105 VSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGK 164

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ---KCRT 583
                +   LM KM    + PTV+T+  +I+  C+  R++D L++ EKM  ++   K   
Sbjct: 165 AREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFV 224

Query: 584 A-----YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
           A     YN +I+ LC  G  EEA  ++GK+         +T + L+  Y   G   +A+K
Sbjct: 225 APDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHK 284

Query: 639 VACRMFNRNLIPDL 652
           +   M N  + P++
Sbjct: 285 LFNEMENAQIEPNV 298


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 129/516 (25%), Positives = 238/516 (46%), Gaps = 45/516 (8%)

Query: 98  ELRNLLRSLKPRQICAVLRSQA---DERVALQFFYWADRQWRYRHDPIVYYMMLEILSKT 154
            +R +L SL    +  ++        +R    FF +   Q  +R     Y+++   L+  
Sbjct: 72  SIRKVLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVH 131

Query: 155 KLCQGAKRVLRLM-ARRGIECRPEAF----------------SYLMVAYSRAGKLRNAMY 197
           ++   A+ ++ L+ +R+G       F                  LM+ Y+  G + +A+ 
Sbjct: 132 EMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQ 191

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
              + +K      +  C   +  ++  N       F   +  AG   NV  +N L+  +C
Sbjct: 192 CFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFC 251

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEKMVNDSNLF 314
               I DA K+ DE+  +   P  VS+ T++   CK   + E   ++  MEK     ++F
Sbjct: 252 KEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVF 311

Query: 315 H---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                      + +++ A  L ++M + G IP+ V +T +++G  R GE+D  K+  Q+M
Sbjct: 312 TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKM 371

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G +P+ V Y   +NG C NG  + AR +++        P+ ITY+ ++ G  R G +
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDV 431

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
             A ++ +EM + G     V  + L+  +C+EG++  A++ ++E L  G   + V +T +
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           +  FC+KGD +    LL +M      P  VTY  +++ L K G+++ A  L+  ML+ G+
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGV 551

Query: 546 VPTVVTYRTVI---HRYC----------QVGRVEDL 568
           VP  +TY T++   HR+           ++G V DL
Sbjct: 552 VPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADL 587



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 167/318 (52%), Gaps = 2/318 (0%)

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           N F  +G I +A+++ +++++    P VV++  ++NG+C+VG LD+  ++  QM     +
Sbjct: 248 NKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTR 307

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P+  +Y+A +N LC   K   A  + +   +    PN + ++ ++HG  R G++    + 
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES 367

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
            ++M+ KG  P  V  N L+   C+ G +  A+  +   + +G   + + +T+LI GFC+
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            GD+E AL +  +M     + D V ++ ++  + K GRV +A   + +ML  G+ P  VT
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVL 609
           Y  ++  +C+ G  +   KLL++M S     +   YN ++  LC  G ++ A  +L  +L
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML 547

Query: 610 RTASKADASTCHVLVESY 627
                 D  T + L+E +
Sbjct: 548 NIGVVPDDITYNTLLEGH 565



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 2/200 (1%)

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           E++  GF       N+L+   C+EG +  A+K   E   +     VV+F +LI G+C+ G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           +L+E   L   M   +  PD  TY+ +I+AL K  +++ A  L  +M  +GL+P  V + 
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           T+IH + + G ++ + +  +KMLSK  Q     YN ++   C  G L  A  I+  ++R 
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409

Query: 612 ASKADASTCHVLVESYLNKG 631
             + D  T   L++ +   G
Sbjct: 410 GLRPDKITYTTLIDGFCRGG 429


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 203/417 (48%), Gaps = 17/417 (4%)

Query: 176 PEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P++ +Y  +     +AG     +     M  +   P LL     +  L   +K+ +A   
Sbjct: 104 PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDV 163

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
            E M   G  P+++ Y+ LI G     R+ +A KL+D M  +G  P  V+Y +++  LCK
Sbjct: 164 FEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCK 223

Query: 294 EKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVT 341
             RI+E    +++M                  +   G++EEA  ++ +M+   C PD ++
Sbjct: 224 CGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTIS 283

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           YT  +     +G  ++A+K+ + M   GCKP+  +Y   ++  C  G    A  ++   +
Sbjct: 284 YTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMD 343

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           +    PN   Y+++M G  +  +L EA ++ + ++K G  P+ V  N +I +LC+  KMD
Sbjct: 344 KAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMD 403

Query: 462 GAKKFMQECLNKGCAV--NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
            A + ++E   +   +  ++V ++ +I G  + G  E A  LL +M      PD  TYT+
Sbjct: 404 EALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTS 463

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           +I  L+  G+V  A EL+ +ML  G+ P   TY T++   C+   V+    LL++M+
Sbjct: 464 LIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMM 519



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 227/493 (46%), Gaps = 26/493 (5%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L++A  R G+L +A   L   Q +   PN+   N  +      +        L  M+  G
Sbjct: 3   LLLALVRGGQLSDA---LGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKARG 59

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC-------SPDKVSYYTVMGYLCKE 294
           IT N  T+  ++   C    +  A+   +    + C       +PD V+Y  ++  L K 
Sbjct: 60  ITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKA 119

Query: 295 KRIKEVRDLMEKMVNDS--------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTY 342
                  +  EKMV            +  D      ++E A ++  +M + G  PD++ Y
Sbjct: 120 GNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAY 179

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           +++++G  + G +D+A+K++  M   G  P  V+YT+ + GLC  G+  EA + I     
Sbjct: 180 SSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRR 239

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
               P   TYS ++ G    GK+ EA  V+ EM  +   P  +   + I++L   G+ + 
Sbjct: 240 RRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREE 299

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A+K  +  + KGC  ++  +  +I  FC++G +  A  +L  M      P+   YT I+D
Sbjct: 300 AEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMD 359

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK-- 580
              K+ R+EEA EL  ++L  G++P+ VTY TVI+  C++ ++++ L+LL +M  +++  
Sbjct: 360 GFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEEL 419

Query: 581 --CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
                 Y+ +I  L   G  E A  +L +++      D  T   L+++    G    A +
Sbjct: 420 EPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAME 479

Query: 639 VACRMFNRNLIPD 651
           +   M    + PD
Sbjct: 480 LLEEMLKAGIFPD 492



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 206/416 (49%), Gaps = 26/416 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y ++++ L K    + A  V   M R+G +    A+S L+   S+AG++  A  ++ +
Sbjct: 142 LTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDL 201

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M      P  +   + +  L    ++ +A++ ++ M+   + P V TY+ ++ GY  + +
Sbjct: 202 MIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGK 261

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +++A  +++EM  + C+PD +SY   +  L                       +  GR E
Sbjct: 262 VEEAFAVMEEMADRDCAPDTISYTMFIEAL-----------------------YSIGRRE 298

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA+++   M + GC PD+ TY  +++ FC+ G +  A  +L+ M     KPN   YT  +
Sbjct: 299 EAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIM 358

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV--KKG 439
           +G   + +  EA E+     ++   P+ +TY+ V++ L +  K+ EA +++REM   K+ 
Sbjct: 359 DGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEE 418

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P+ V  +++I  L + G  + A   + E ++ G   +   +TSLI+     G +  A+
Sbjct: 419 LEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAM 478

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
            LL++M      PD  TY T++  L ++  V+ A +L+ +M+  G  P   T++ V
Sbjct: 479 ELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTFKAV 533



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 182/386 (47%), Gaps = 26/386 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           ++ D I Y  +++ LSK      A++++ LM  RG      A++ ++    + G+++ A+
Sbjct: 172 HKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAV 231

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             +  M++  + P +   +  +   +   K+ +A   +E M      P+ ++Y   I+  
Sbjct: 232 KTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEAL 291

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
             + R ++A K+ + M  KGC PD  +Y  ++   CKE                      
Sbjct: 292 YSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKE---------------------- 329

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            G +  A  ++  M +    P+   YT +++GF +   L++A ++ Q++   G  P+TV+
Sbjct: 330 -GSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVT 388

Query: 377 YTAFLNGLCHNGKSLEAREMINTSE--EEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           Y   +N LC   K  EA E++   +  +E   P+ +TYS+++HGL + G    A D++ E
Sbjct: 389 YNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAE 448

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M+  G  P       LIQ+L   GK+  A + ++E L  G   +   + +L++  C + D
Sbjct: 449 MIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILC-RSD 507

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTI 520
           ++ A  LL +M      P+  T+  +
Sbjct: 508 VDAAWDLLQEMMRNGHTPNEFTFKAV 533



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 144/313 (46%), Gaps = 12/313 (3%)

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           + L  L   G+  +A     +S  E   PN  ++++++ G            ++REM  +
Sbjct: 2   SLLLALVRGGQLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREMKAR 58

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC-------AVNVVNFTSLIRGFCQ 491
           G         +++ +LC    +D A  +      + C       A + V +T+++ G  +
Sbjct: 59  GITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFK 118

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G+ +  L   + M   K +P  +TYT ++D L K  +VE A ++  +M+ KG  P ++ 
Sbjct: 119 AGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIA 178

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVL 609
           Y ++I    + GRV++  KL++ M+++    TA  Y  ++  LC  G ++EA K + ++ 
Sbjct: 179 YSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMR 238

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
           R   +    T   +V  Y+  G    A+ V   M +R+  PD        E L   G+ E
Sbjct: 239 RRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRRE 298

Query: 670 EADTLMLRFVERG 682
           EA+ +    VE+G
Sbjct: 299 EAEKVFETMVEKG 311


>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Glycine max]
          Length = 587

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 215/472 (45%), Gaps = 42/472 (8%)

Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP------- 176
           +  FF W D    Y H     + M+ IL++ K  + A+ VL  +A +     P       
Sbjct: 57  SFPFFKWLDSIPHYSHSLQCSWAMIHILTEHKHFKTAQHVLEKIAHKDFLSSPSVLSTLV 116

Query: 177 ----------EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
                     +  S+L++ Y+++   ++A+ V   M+   V P+L  C   ++ L+    
Sbjct: 117 RTHDNQEVNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGV 176

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
                +  +RM   G+ PN+  YNCL         ++ A +L++EM +KG   D  +Y T
Sbjct: 177 THMVWKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNT 236

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++   CK                       +G   EA  + N+M + G   D+V+Y +++
Sbjct: 237 LLSLYCK-----------------------KGMHYEALSIQNRMEREGINLDIVSYNSLI 273

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
            GFC+ G + +A +M  ++      PN V+YT  ++G C   +  EA +M    E +   
Sbjct: 274 YGFCKEGRMREAMRMFSEI--KNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLY 331

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P  +TY+ ++  L ++G++ +A  ++ EM ++      +  N LI + C+ G +  A KF
Sbjct: 332 PGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKF 391

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
             + L  G   +   + +LI GFC+  +LE A  L+  M      P   TY+ I+D  +K
Sbjct: 392 KNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNK 451

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
              ++    L  + LS+G+   V  YR +I   C+V R++   +L   M  K
Sbjct: 452 KDNMDAVLALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGK 503



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 8/280 (2%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+    +V+++ L ++G       + + MV+ G  P     N L  +  + G ++ A++ 
Sbjct: 159 PHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQL 218

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           + E   KG   ++  + +L+  +C+KG   EALS+ + M     + D V+Y ++I    K
Sbjct: 219 LNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCK 278

Query: 527 NGRVEEATELMMKMLS--KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCR 582
            GR+ EA    M+M S  K   P  VTY T+I  YC+   +E+ LK+ + M +K      
Sbjct: 279 EGRMREA----MRMFSEIKNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGV 334

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             YN ++  LC  G + +A K+L ++     +AD  TC+ L+ +Y   G    A K   +
Sbjct: 335 VTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNK 394

Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           M    L PD    K +        + E A  LM   ++ G
Sbjct: 395 MLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAG 434


>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 156/624 (25%), Positives = 280/624 (44%), Gaps = 46/624 (7%)

Query: 79  REVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYR 138
           + + RLI     WS +L+  L  L  SL    +   L+       AL FF W + +  + 
Sbjct: 67  QAMARLINTE-PWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALHFFRWVEAKG-FT 124

Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARR---GIECRPEAFSYLMVAYSRAGKLRNA 195
           H+   Y++M+EIL +++    A+  +  + ++    ++     F+ L+ +Y  AG  + +
Sbjct: 125 HNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQES 184

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNK--LAKALRFLERMQLAGITPNVLTYNCLI 253
           + V   M++  V+P+++  N+ + +++   +  +AK L F E +   G+TP+  T+N LI
Sbjct: 185 IKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQL-FDEMLDTYGVTPDTYTFNILI 243

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
           +G+C    + +      EM    C PD V+Y T++  LC+  ++K   ++++ MV  S  
Sbjct: 244 RGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSP- 302

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                                  P+VVTYT ++ G+C   ++ +A  +L +M   G KPN
Sbjct: 303 --------------------NLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPN 342

Query: 374 TVSYTAFLNGLCHNGKSLEAREMI-NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
            ++Y   + GLC   K  + +E++     +  + P+  T + ++      GKL EA  V 
Sbjct: 343 KITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVF 402

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK-------GCAVNVVNFTSL 485
            +M +    P     ++L++SLC+ G    A++F  E   K       GC   V  +  +
Sbjct: 403 EKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPM 462

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
               C  G  ++A  +   + + +   D  +Y T+I    + G  E   +L++ ML +  
Sbjct: 463 FEYLCSNGKTKKAERVFRQL-MKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDF 521

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGK 603
           VP   TY  +I    + G      K LEKML      T   ++ ++  L   G   E+  
Sbjct: 522 VPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESAS 581

Query: 604 ILGKVL--RTASKADASTCHVLVE--SYLNKGIPLL-AYKVACRMFNRNLIPDLKLCKKV 658
           ++  +L  R     D ST H + E  S+L +   LL A K+      +    D+ +C  V
Sbjct: 582 LVKLMLERRIRQNIDLST-HTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTV 640

Query: 659 SERLILEGKSEEADTLMLRFVERG 682
              L    K  EA  L    VE+G
Sbjct: 641 ISGLCKAHKVSEAFALYYELVEKG 664



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 202/441 (45%), Gaps = 35/441 (7%)

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDL---MEKMVNDSNLFHDQ------------GR 319
           KG + ++ SY+ ++  L + + +   R+    +EK    +    D+            G 
Sbjct: 121 KGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGL 180

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH-HGCKPNTVSYT 378
            +E+ ++   M ++G  P VVT+ ++++   + G    AK++  +M   +G  P+T ++ 
Sbjct: 181 FQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFN 240

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             + G C N    E              P+ +TY+ ++ GL R GK+  A +VV+ MVKK
Sbjct: 241 ILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKK 300

Query: 439 G--FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
                P  V    LI+  C +  M  A   + E +++G   N + + +LI+G C+   L+
Sbjct: 301 SPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLD 360

Query: 497 EALSLLDDMYLCKKD----PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           +   +L+ M     D    PDT T  T+I A    G++EEA  +  KM    + P   TY
Sbjct: 361 KIKEILEGMV---GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATY 417

Query: 553 RTVIHRYCQVG---RVEDLLKLL---EKMLSKQKCR---TAYNQVIENLCSFGYLEEAGK 603
             ++   CQ G   R E+    L   E +L    C+    AYN + E LCS G  ++A +
Sbjct: 418 SVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAER 477

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
           +  ++++  ++ D  +   L+  +  +G P   + +   M  R+ +PD +    + + L+
Sbjct: 478 VFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLL 536

Query: 664 LEGKSEEADTLMLRFVERGHI 684
            +G    A   + + ++  H+
Sbjct: 537 KKGDPVLAHKSLEKMLKSSHL 557



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 167/357 (46%), Gaps = 34/357 (9%)

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           + +++  +   G   ++ K+ + M   G  P+ V++ + L+ +   G++  A+++ +   
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227

Query: 402 EEWW-TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
           + +  TP+  T+++++ G      + E     +EM +    P  V  N L+  LCR GK+
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287

Query: 461 DGAKKFMQECLNKG--CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
             A   ++  + K    + NVV +T+LIRG+C K D+ EALSLL +M      P+ +TY 
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYN 347

Query: 519 TIIDALSKNGRVEEATELMMKMLSKG-LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-- 575
           T+I  L +  ++++  E++  M+  G  +P   T  T+I  +C +G++E+   + EKM  
Sbjct: 348 TLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSE 407

Query: 576 LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
           L  Q     Y+ ++ +LC  G    A +   ++           C  LV +Y     P+ 
Sbjct: 408 LRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAY----NPMF 463

Query: 636 AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
            Y                LC          GK+++A+ +  + ++RG   P S + L
Sbjct: 464 EY----------------LCS--------NGKTKKAERVFRQLMKRGTQDPPSYKTL 496


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 229/515 (44%), Gaps = 26/515 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D IVY ++++ L K    +  +R+L +   +GI+     FS  M AY + G L   + + 
Sbjct: 341 DLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIY 400

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    ++PN++ C+  I       ++ +A     ++   G  P++LTY+ LI G+C  
Sbjct: 401 KRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKS 460

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             ++D   L ++M  K C PD + Y  ++  LCK                       QG 
Sbjct: 461 GNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCK-----------------------QGL 497

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           + +A     Q    G  P+V T   +++ FCR+  +  A K+   M     K +TV+YT 
Sbjct: 498 VGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTI 557

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            + G    G+  EA  +     ++ + P+ ITY  ++ GL +  K S    +   M K  
Sbjct: 558 LIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNA 617

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     N+LI    REG ++ A       + +G   +V  F ++I  +C    L++A+
Sbjct: 618 VAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAV 677

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            L   M   +  P+ +T+T +IDA  + GR+++A  +  KML +G  P +VTY  +IH Y
Sbjct: 678 QLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGY 737

Query: 560 CQV-GRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            +    +E  LKL  +ML         +Y+ +I+ LC  G ++EA       L      D
Sbjct: 738 FKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPD 797

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
                +L+  Y   G    A  +   M    L PD
Sbjct: 798 VIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/518 (24%), Positives = 238/518 (45%), Gaps = 38/518 (7%)

Query: 175 RPEAFS---YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           R + FS   ++M  +   G++   +     + +     +++ CN  +  + + N +  A 
Sbjct: 233 REQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVAD 292

Query: 232 RFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYL 291
            +   +   G  PNV+T++ LI  YC    +  A  L D M   G +PD + Y  ++  L
Sbjct: 293 DYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGL 352

Query: 292 CKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
            K                        GR+E+ + L+      G   DVV +++ ++ + +
Sbjct: 353 FKA-----------------------GRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVK 389

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
           +G+L +  ++ ++M + G  PN VS +  + G C NG+ LEA  +     +  + P+ +T
Sbjct: 390 IGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILT 449

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           YS ++ G  + G L +   +  +M+KK   P  +  ++LI  LC++G +  A +F  + +
Sbjct: 450 YSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAV 509

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
           N+G + NV    +L+  FC+   +  A+ +   M +     DTVTYT +I   ++ GRV+
Sbjct: 510 NRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVD 569

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA------- 584
           EA  L  +ML K   P V+TY T+I   C++ +    L + + M     C+ A       
Sbjct: 570 EALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFM-----CKNAVAPDIAI 624

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN +I      G+LE A  +   V+    K D  T + ++  Y N      A ++  +M 
Sbjct: 625 YNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMT 684

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +  L P+      + +    EG+ ++A  +  + +E G
Sbjct: 685 SEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEG 722



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 128 FYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVA 185
           FY  +   + R +P  IVY +++  L K  L   A R       RG+       + L+ +
Sbjct: 467 FYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDS 526

Query: 186 YSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN 245
           + R   +  AM V  +M    +  + +     I       ++ +AL    +M      P+
Sbjct: 527 FCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPD 586

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           V+TY  LI G C L +    + + D M     +PD ++ Y V+                 
Sbjct: 587 VITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPD-IAIYNVL----------------- 628

Query: 306 KMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
                 N+   +G +E A  L   + + G  PDV T+  ++  +C    LD A ++  +M
Sbjct: 629 -----INMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKM 683

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG-LRREGK 424
                +PN +++T  ++  C  G+  +A  M +   EE   PN +TYS ++HG  + +  
Sbjct: 684 TSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSM 743

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           +     +  EM++    P  V  ++LI  LC+ G M  A    +  L+K    +V+ +T 
Sbjct: 744 MESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTI 803

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           LIRG+C+ G L EA+ L D+M L +  PD
Sbjct: 804 LIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/501 (22%), Positives = 210/501 (41%), Gaps = 62/501 (12%)

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG--CSPDKVSYYTVMGYL----CKEKR 296
           T + + Y  LI+ YC       ++ +   + +KG   SP+ V  Y ++G L    C E  
Sbjct: 164 TNHSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVV--YLLLGSLIDSHCVEVI 221

Query: 297 IKEVRDLMEKMVNDS--------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
           + +  +L   M            N F ++G +E        + Q G   D++T   ++ G
Sbjct: 222 VDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKG 281

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
                ++  A      +   G KPN V+++  ++  C  G   +A  + +       TP+
Sbjct: 282 IWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPD 341

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
            I YS+++ GL + G+L +   ++   + KG     V  +  + +  + G +    +  +
Sbjct: 342 LIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYK 401

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL-------------------------- 502
             LN+G + NVV+ + LI+GFCQ G + EA  L                           
Sbjct: 402 RMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSG 461

Query: 503 ---DDMYLCKK------DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
              D  YL +       +PDT+ Y+ +I+ L K G V +A     + +++GL P V T  
Sbjct: 462 NLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLN 521

Query: 554 TVIHRYCQVGRVEDLLKL--LEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           T++  +C++  +   +K+  L  ML+ +     Y  +I+    FG ++EA  +  ++L+ 
Sbjct: 522 TLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKK 581

Query: 612 ASKADASTCHVLVESYL---NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKS 668
             K D  T   L++           L  +   C+     + PD+ +   +      EG  
Sbjct: 582 DFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCK---NAVAPDIAIYNVLINMHSREGHL 638

Query: 669 EEADTLMLRFVERGHIQPKSE 689
           E A  L +  VERG   PK +
Sbjct: 639 EAALGLFVHVVERG---PKPD 656



 Score = 46.6 bits (109), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 38/166 (22%)

Query: 173 ECRPEA--FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           + RP A  F+ L+ A+ R G++ +AM + S M +    PNL+  +  IH       + ++
Sbjct: 687 QLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMES 746

Query: 231 -LRFLERMQLAGITPN-----------------------------------VLTYNCLIK 254
            L+    M    I PN                                   V+ Y  LI+
Sbjct: 747 GLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIR 806

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
           GYC + R+ +A+ L D M L   +PD+    T+  Y  K+   K +
Sbjct: 807 GYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTLEEYQLKKAGAKHL 852


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 234/515 (45%), Gaps = 60/515 (11%)

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           +GI      F+ L+  Y   G++  A  + + + K    P  +  NT I+ + +  KL +
Sbjct: 88  KGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKE 147

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           AL F + +   G   + ++Y  LI G C +   + A++++ ++  K  + D V Y  ++ 
Sbjct: 148 ALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIIN 207

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            LCK+K + +   L  +M+          RI                PDVVT+ +++ GF
Sbjct: 208 SLCKDKAVSDAYQLYSEMITK--------RIS---------------PDVVTFNSLILGF 244

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C VG+L +A  +  +M      P+  +++  ++ LC +G    A+ M+    ++   P+ 
Sbjct: 245 CVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDV 304

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           +TYS +M G     ++++A  V   M + G  P     N++I  L +   +D A    +E
Sbjct: 305 VTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKE 364

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
              KG A + V + SLI G C+ G +  A  L+D+M+      D +TY ++ID L KN  
Sbjct: 365 MCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHH 424

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQ 587
           +++A  L+ K+  +G+ P++ TY  +I   C+ GR+++   + + +L K     A  YN 
Sbjct: 425 IDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNI 484

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I  LC  G   EA  +L K                                   M N  
Sbjct: 485 MINGLCKEGLFNEAEVLLSK-----------------------------------MENNG 509

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +IPD    + +   L  + ++E+A+ L+   + RG
Sbjct: 510 IIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 217/443 (48%), Gaps = 14/443 (3%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           ++   + P ++  N  ++      ++  A     ++   G  P  +T+N LI G C   +
Sbjct: 85  LELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGK 144

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK--EKR--IKEVRDLMEKMVNDSNLFHD- 316
           +K+A+   D +   G   D+VSY T++  LCK  E R  ++ ++ +  K+VN   + ++ 
Sbjct: 145 LKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNI 204

Query: 317 -------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                     + +A +L ++M      PDVVT+ +++ GFC VG+L +A  +  +M    
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN 264

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             P+  +++  ++ LC +G    A+ M+    ++   P+ +TYS +M G     ++++A 
Sbjct: 265 INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAK 324

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            V   M + G  P     N++I  L +   +D A    +E   KG A + V + SLI G 
Sbjct: 325 HVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGL 384

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+ G +  A  L+D+M+      D +TY ++ID L KN  +++A  L+ K+  +G+ P++
Sbjct: 385 CKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSM 444

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGK 607
            TY  +I   C+ GR+++   + + +L K     A  YN +I  LC  G   EA  +L K
Sbjct: 445 YTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSK 504

Query: 608 VLRTASKADASTCHVLVESYLNK 630
           +       DA T   ++ +   K
Sbjct: 505 MENNGIIPDAVTYETIIRALFRK 527



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 181/373 (48%), Gaps = 3/373 (0%)

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
           +      A  L +Q+   G  P +VT+  +VN +C +GE+  A  +  ++   G  P T+
Sbjct: 71  NNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTI 130

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           ++   +NG+C NGK  EA    +      +  + ++Y  +++GL + G+   A  +++++
Sbjct: 131 TFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKI 190

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
             K      V  N++I SLC++  +  A +   E + K  + +VV F SLI GFC  G L
Sbjct: 191 EGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQL 250

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           +EA  L  +M L   +PD  T++ ++DAL K+G +  A  ++  M+ +G++P VVTY ++
Sbjct: 251 KEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSL 310

Query: 556 IHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +  YC V  V     +   M  L       +YN +I  L     ++EA  +  ++     
Sbjct: 311 MDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGI 370

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             D  T + L++     G    A+++   M N  +  D+     + + L      ++A  
Sbjct: 371 APDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIA 430

Query: 674 LMLRFVERGHIQP 686
           L+ +  ++G IQP
Sbjct: 431 LVKKIKDQG-IQP 442



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 179/368 (48%), Gaps = 23/368 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D ++Y +++  L K K    A ++   M  + I      F+ L++ +   G+L+ A  + 
Sbjct: 198 DVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLF 257

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    + P++   +  +  L     + +A   L  M   G+ P+V+TY+ L+ GYC +
Sbjct: 258 HEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLV 317

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           + +  A  +   M   G +P   SY  ++  L K K +                      
Sbjct: 318 NEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMV---------------------- 355

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            +EA  L  +M   G  PD VTY ++++G C++G +  A +++ +M+++G   + ++Y +
Sbjct: 356 -DEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNS 414

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            ++ LC N    +A  ++   +++   P+  TY++++ GL + G+L  A DV ++++ KG
Sbjct: 415 LIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKG 474

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           +       N++I  LC+EG  + A+  + +  N G   + V + ++IR   +K + E+A 
Sbjct: 475 YSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAE 534

Query: 500 SLLDDMYL 507
            LL +M +
Sbjct: 535 KLLREMII 542



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/413 (23%), Positives = 203/413 (49%), Gaps = 36/413 (8%)

Query: 68  LEEDEFRHPLVREVCRLIELRSAWS--PKLEGELRN---LLRSLKPRQICAVLRSQADER 122
           L++  +R  L+  +C++ E R+A     K+EG+L N   ++ ++    +C       D+ 
Sbjct: 162 LDQVSYR-TLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCK------DKA 214

Query: 123 VALQFFYWADR-QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           V+  +  +++    R   D + +  ++         + A  +   M  + I      FS 
Sbjct: 215 VSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSI 274

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+ A  + G +  A  +L++M K  V P+++  ++ +    + N++ KA      M   G
Sbjct: 275 LVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLG 334

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           + P+  +YN +I G   +  + +A+ L  EM  KG +PD V+Y +++  LCK        
Sbjct: 335 VAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCK-------- 386

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                           GRI  A +LV++M   G   D++TY ++++  C+   +D+A  +
Sbjct: 387 ---------------LGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIAL 431

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           ++++   G +P+  +Y   ++GLC  G+   A+++      + ++ NA TY+++++GL +
Sbjct: 432 VKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCK 491

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           EG  +EA  ++ +M   G  P  V    +I++L R+ + + A+K ++E + +G
Sbjct: 492 EGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544


>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 662

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 246/524 (46%), Gaps = 23/524 (4%)

Query: 76  PLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRS---QADERVALQFFYWAD 132
           P V ++  L++  ++    L+G  R  L  L P  +  VL+S   +    +A  FF W+ 
Sbjct: 84  PWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSR 143

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +Q +Y H+   Y  ++++L+  K     + +   + +          + L+ ++ + G +
Sbjct: 144 KQKKYTHNLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMV 203

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
              ++V   M++  + P L   N  ++ LV    +  A R  E M+   I P+V+TYN +
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTM 263

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           IKGYC   + + A++ +  M  KG   DK++Y T++     +        L ++M ++  
Sbjct: 264 IKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEM-DEKG 322

Query: 313 L-------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
           L                +G++ E   +   M + G  P+V  YT +++G+ + G ++ A 
Sbjct: 323 LQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAI 382

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++L +M   G  P+ V+Y+  +NGLC NG+  EA +   T        N++ YS ++ GL
Sbjct: 383 RLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGL 442

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK---KFMQECLNKGCA 476
            + G++ EA  +  EM +KG        N LI +  + GK+D A    K M+E   +GC 
Sbjct: 443 GKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEE--EEGCD 500

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
             V  +T LI G  ++   EEAL L D M      P       +   L  +G+V  A ++
Sbjct: 501 QTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKI 560

Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           + ++   G++        +I+  C+ GR+++  KL + +  + +
Sbjct: 561 LDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITERGR 603



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 175/375 (46%), Gaps = 5/375 (1%)

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           F   G +EE   +  +M + G  P + TY  ++NG      +D A+++ + M     KP+
Sbjct: 197 FGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPD 256

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            V+Y   + G C  G++ +A E +   E +    + ITY  ++     +   S    + +
Sbjct: 257 VVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQ 316

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM +KG    P   +L+I  LC+EGK++      +  + KG   NV  +T LI G+ + G
Sbjct: 317 EMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTG 376

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            +E+A+ LL  M     +PD VTY+ +++ L KNGRVEEA +        GL    + Y 
Sbjct: 377 SVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYS 436

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRT 611
           ++I    + GRV++  +L E+M  K   R +  YN +I+     G ++EA  +  K +  
Sbjct: 437 SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALF-KRMEE 495

Query: 612 ASKADAS--TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
               D +  T  +L+     +     A K+   M ++ + P     + +S  L L GK  
Sbjct: 496 EEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVA 555

Query: 670 EADTLMLRFVERGHI 684
            A  ++      G I
Sbjct: 556 RACKILDELAPMGVI 570



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/406 (22%), Positives = 169/406 (41%), Gaps = 60/406 (14%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  M++             + + M  +G++  P AFS ++    + GKL     V 
Sbjct: 291 DKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVF 350

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +    PN+ I    I        +  A+R L RM   G  P+V+TY+ ++ G C  
Sbjct: 351 ENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKN 410

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
            R+++A+         G + + + Y +++  L K                        GR
Sbjct: 411 GRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGK-----------------------AGR 447

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM-YHHGCKPNTVSYT 378
           ++EA+ L  +MS+ GC  D   Y A+++ F + G++D+A  + ++M    GC     +YT
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYT 507

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++G+    ++ EA ++ +   ++  TP A     +  GL   GK++ AC ++ E+   
Sbjct: 508 ILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPM 567

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G         +++ + C +                           +I   C+ G ++EA
Sbjct: 568 G---------VILDAACED---------------------------MINTLCKAGRIKEA 591

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
             L D +    ++      T +I+AL K G+ + A +LM   +  G
Sbjct: 592 CKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIG 637


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 189/355 (53%), Gaps = 12/355 (3%)

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           +L ++  F   +  +G  PN   +N L+ G+C +  +  A  + DE+P +G  P  VS+ 
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 286 TVMGYLCKEKRIKE---VRDLME--KMVNDSNLFH-------DQGRIEEAKELVNQMSQM 333
           T++   CK   ++E   ++ +ME  ++  D   F         +GR++E   L ++M   
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G +P+ VT+T +++G C+ G++D A K  Q M   G +P+ V+Y A +NGLC  G   EA
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
           R ++N        P+ IT++ ++ G  + G +  A ++ R MV++G     V   +LI  
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG 361

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           LCR+G++  A++ +++ L+ G   +   +T ++  FC+KG++     LL +M      P 
Sbjct: 362 LCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPG 421

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
            VTY  +++ L K G+V+ A  L+  ML+ G+ P  +TY  ++  + + G   D+
Sbjct: 422 VVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDV 476



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 187/379 (49%), Gaps = 26/379 (6%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ LM  + + G + +A  V   + K  + P ++  NT I        + +  R    M+
Sbjct: 145 FNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVME 204

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
              + P+V T++ LI G C   R+ +   L DEM  KG  P+ V++  ++   CK     
Sbjct: 205 SERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCK----- 259

Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
                              G+++ A +    M   G  PD+VTY A++NG C+VG+L +A
Sbjct: 260 ------------------GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
           ++++ +M   G +P+ +++T  ++G C  G    A E+     EE    + + ++V++ G
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG 361

Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
           L R+G++ +A  ++R+M+  GF P      +++   C++G +    K ++E  + G    
Sbjct: 362 LCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPG 421

Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
           VV + +L+ G C++G ++ A  LLD M      P+ +TY  +++  SK+G    + ++ +
Sbjct: 422 VVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHG---SSVDVDI 478

Query: 539 KMLSKGLVPTVVTYRTVIH 557
               KGLV    +Y  +++
Sbjct: 479 FNSEKGLVKDYASYTALVN 497



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 169/343 (49%), Gaps = 7/343 (2%)

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
           G  P+   +  +++GFC+VG +  A+ +  ++   G +P  VS+   ++G C  G   E 
Sbjct: 137 GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEG 196

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
             +    E E   P+  T+S +++GL +EG+L E   +  EM  KG  P  V   +LI  
Sbjct: 197 FRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDG 256

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
            C+ GK+D A K  Q  L +G   ++V + +LI G C+ GDL+EA  L+++M      PD
Sbjct: 257 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPD 316

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            +T+TT+ID   K G +E A E+  +M+ +G+    V +  +I   C+ GRV D  ++L 
Sbjct: 317 RITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLR 376

Query: 574 KMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            MLS   +     Y  V++  C  G +    K+L ++          T + L+     +G
Sbjct: 377 DMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQG 436

Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
               A  +   M N  + P+      ++  ++LEG S+   ++
Sbjct: 437 QVKNAKMLLDAMLNVGVAPN-----DITYNILLEGHSKHGSSV 474



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 161/320 (50%), Gaps = 2/320 (0%)

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           F   G +  A+ + +++ + G  P VV++  +++G C+ G +++  ++   M      P+
Sbjct: 152 FCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPD 211

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             +++A +NGLC  G+  E   + +    +   PN +T++V++ G  + GK+  A    +
Sbjct: 212 VFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQ 271

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
            M+ +G  P  V  N LI  LC+ G +  A++ + E    G   + + FT+LI G C+ G
Sbjct: 272 MMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYG 331

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           D+E AL +   M     + D V +T +I  L ++GRV +A  ++  MLS G  P   TY 
Sbjct: 332 DMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYT 391

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRT 611
            V+  +C+ G V    KLL++M S         YN ++  LC  G ++ A  +L  +L  
Sbjct: 392 MVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNV 451

Query: 612 ASKADASTCHVLVESYLNKG 631
               +  T ++L+E +   G
Sbjct: 452 GVAPNDITYNILLEGHSKHG 471



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 129/254 (50%), Gaps = 6/254 (2%)

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           +  + PN   ++V+MHG  + G +  A  V  E+ K+G  PT V  N LI   C+ G ++
Sbjct: 135 DSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVE 194

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTT 519
              +      ++    +V  F++LI G C++G L+E   L D+M  C K   P+ VT+T 
Sbjct: 195 EGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEM--CGKGLVPNGVTFTV 252

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK- 578
           +ID   K G+V+ A +    ML++G+ P +VTY  +I+  C+VG +++  +L+ +M +  
Sbjct: 253 LIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASG 312

Query: 579 -QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
            +  R  +  +I+  C +G +E A +I  +++    + D     VL+      G    A 
Sbjct: 313 LRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAE 372

Query: 638 KVACRMFNRNLIPD 651
           ++   M +    PD
Sbjct: 373 RMLRDMLSAGFKPD 386



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 4/196 (2%)

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           E++  G+ P     N+L+   C+ G +  A+    E   +G    VV+F +LI G C+ G
Sbjct: 132 EVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAG 191

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            +EE   L   M   +  PD  T++ +I+ L K GR++E + L  +M  KGLVP  VT+ 
Sbjct: 192 AVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFT 251

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLR 610
            +I   C+ G+V+  LK  + ML+ Q  R     YN +I  LC  G L+EA +++ ++  
Sbjct: 252 VLIDGQCKGGKVDLALKNFQMMLA-QGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSA 310

Query: 611 TASKADASTCHVLVES 626
           +  + D  T   L++ 
Sbjct: 311 SGLRPDRITFTTLIDG 326



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 13/221 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPE--AFSYLMVAYSRAGKLRNA 195
           R D + Y  ++  L K    + A+R++  M+  G+  RP+   F+ L+    + G + +A
Sbjct: 279 RPDLVTYNALINGLCKVGDLKEARRLVNEMSASGL--RPDRITFTTLIDGCCKYGDMESA 336

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + +   M +  +  + +     I  L    ++  A R L  M  AG  P+  TY  ++  
Sbjct: 337 LEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDC 396

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           +C    +    KL+ EM   G  P  V+Y  +M  LCK+ ++K  + L++ M+N     +
Sbjct: 397 FCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPN 456

Query: 316 D-------QGRIEEAKELVNQM--SQMGCIPDVVTYTAVVN 347
           D       +G  +    +   +  S+ G + D  +YTA+VN
Sbjct: 457 DITYNILLEGHSKHGSSVDVDIFNSEKGLVKDYASYTALVN 497


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 202/390 (51%), Gaps = 18/390 (4%)

Query: 187 SRAGKLRNAMYVLSM---MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
           S+  K +N   V+S+   M+   +  +L   N  I+ L   ++   AL  + +M   G  
Sbjct: 18  SKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYE 77

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+V+T + LI G+C  +R+ DAI L+ +M   G  PD V Y T++   CK   + +  +L
Sbjct: 78  PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 137

Query: 304 MEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
            ++M  D         ++L       GR  +A  L+  M     +P+V+T+TAV++ F +
Sbjct: 138 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 197

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            G+  +A K+ ++M      P+  +Y + +NGLC +G+  EA++M++    +   P+ +T
Sbjct: 198 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 257

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+ +++G  +  ++ E   + REM ++G     +  N +IQ   + G+ D A++      
Sbjct: 258 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD 317

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
           ++    N+  ++ L+ G C    +E+AL L ++M   + + D  TY  +I  + K G VE
Sbjct: 318 SRP---NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVE 374

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           +A +L   +  KGL P VV+Y T+I  +C+
Sbjct: 375 DAWDLFRSLSCKGLKPDVVSYTTMISGFCR 404



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 186/385 (48%), Gaps = 17/385 (4%)

Query: 177 EAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
           + +SY +V     R  +   A+ V+  M K    P+++  ++ I+    GN++  A+  +
Sbjct: 44  DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 103

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
            +M+  G  P+V+ YN +I G C +  + DA++L D M   G   D V+Y +++  LC  
Sbjct: 104 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 163

Query: 295 KRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
            R  +   LM  MV               ++F  +G+  EA +L  +M++    PDV TY
Sbjct: 164 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 223

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
            +++NG C  G +D+AK+ML  M   GC P+ V+Y   +NG C + +  E  ++     +
Sbjct: 224 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 283

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
                + ITY+ ++ G  + G+   A ++   M  +   P     ++L+  LC   +++ 
Sbjct: 284 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEK 340

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A    +        +++  +  +I G C+ G++E+A  L   +      PD V+YTT+I 
Sbjct: 341 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 400

Query: 523 ALSKNGRVEEATELMMKMLSKGLVP 547
              +  + +++  L  KM   GL+P
Sbjct: 401 GFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 186/388 (47%), Gaps = 24/388 (6%)

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAK 324
            I L   M + G   D  SY  V+  LC+                         R   A 
Sbjct: 29  VISLFHHMEVCGIGHDLYSYNIVINCLCR-----------------------CSRFVIAL 65

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            +V +M + G  PDVVT ++++NGFC+   +  A  ++ +M   G +P+ V Y   ++G 
Sbjct: 66  SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 125

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  G   +A E+ +  E +    +A+TY+ ++ GL   G+ S+A  ++R+MV +   P  
Sbjct: 126 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 185

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           +    +I    +EGK   A K  +E   +    +V  + SLI G C  G ++EA  +LD 
Sbjct: 186 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 245

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M      PD VTY T+I+   K+ RV+E T+L  +M  +GLV   +TY T+I  Y Q GR
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 305

Query: 565 VEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
            +   ++  +M S+   RT Y+ ++  LC    +E+A  +   + ++  + D +T ++++
Sbjct: 306 PDAAQEIFSRMDSRPNIRT-YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 364

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDL 652
                 G    A+ +   +  + L PD+
Sbjct: 365 HGMCKIGNVEDAWDLFRSLSCKGLKPDV 392



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 155/325 (47%), Gaps = 26/325 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +R D ++Y  +++   K  L   A  +   M R G+      ++ L+     +G+  +A 
Sbjct: 111 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 170

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            ++  M    + PN++     I V V   K ++A++  E M    + P+V TYN LI G 
Sbjct: 171 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 230

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   R+ +A +++D M  KGC PD V+Y T++   CK K                     
Sbjct: 231 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK--------------------- 269

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
             R++E  +L  +M+Q G + D +TY  ++ G+ + G  D A+++  +M     +PN  +
Sbjct: 270 --RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRT 324

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y+  L GLC N +  +A  +    ++     +  TY++V+HG+ + G + +A D+ R + 
Sbjct: 325 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 384

Query: 437 KKGFFPTPVEINLLIQSLCREGKMD 461
            KG  P  V    +I   CR+ + D
Sbjct: 385 CKGLKPDVVSYTTMISGFCRKRQWD 409



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 165/349 (47%), Gaps = 7/349 (2%)

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M Q   +P +V ++ V++   +    D    +   M   G   +  SY   +N LC   +
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
            + A  ++    +  + P+ +T S +++G  +  ++ +A D+V +M + GF P  V  N 
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           +I   C+ G ++ A +        G   + V + SL+ G C  G   +A  L+ DM +  
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P+ +T+T +ID   K G+  EA +L  +M  + + P V TY ++I+  C  GRV++  
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 570 KLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           ++L+ M++K  C      YN +I   C    ++E  K+  ++ +     D  T + +++ 
Sbjct: 241 QMLDLMVTK-GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 299

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           Y   G P  A ++  RM +R   P+++    +   L +  + E+A  L 
Sbjct: 300 YFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLF 345


>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 158/615 (25%), Positives = 274/615 (44%), Gaps = 90/615 (14%)

Query: 78  VREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRY 137
            + +  LI  +  WS +L   L +   SL    +   LR       A  FF W   +  +
Sbjct: 59  AKTIANLINYK-PWSDEL---LSSFTTSLSKTTVFQTLRHIKVPTKAFLFFNWIHEKG-F 113

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRG---IECRPEAFSYLMVAYSRAGKLRN 194
            H+P  Y++MLEIL + K    A+  L  + +R    ++     F+ L+ +Y  AG  + 
Sbjct: 114 SHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKE 173

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK--LAKALRFLERMQLAGITPNVLTYNCL 252
           ++ +   M+   V+P ++  N+ + VL+   +  +AK + + E ++  G+ P+  TYN L
Sbjct: 174 SVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEV-YDEMLKTYGVKPDTYTYNIL 232

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I+G+C    + +      EM    C PD V+Y T++  LC+                   
Sbjct: 233 IRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCR------------------- 273

Query: 313 LFHDQGRIEEAKELVNQMSQM--GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                G+I+ A  LVN MS+      PDVVTYT ++ G+CR  E+D+A  +L++M   G 
Sbjct: 274 ----AGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGL 329

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           KPN V+Y   + GLC   K  + +E++                  M G    G + +AC 
Sbjct: 330 KPNIVTYNTLIKGLCEAQKWDKMKEILEQ----------------MKG--DGGSIPDAC- 370

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
                            N LI S C  G +D A K  +       + +  +++ LIR  C
Sbjct: 371 ---------------TFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLC 415

Query: 491 QKGDLEEALSLLDDMY-----LCKKDPD--TVTYTTIIDALSKNGRVEEATELMMKMLSK 543
           QKGD  +A  L D+++     L    P     +Y  +   L +NG+ ++A  ++ +++ +
Sbjct: 416 QKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKR 475

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEE- 600
           G     ++Y+ VI  +C+ G  E+   LL  ML +        Y+ +I+     G+L + 
Sbjct: 476 G-TQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLID-----GFLRKD 529

Query: 601 ----AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
               A + L K+L+++ K   ST H ++   L +G    +  V   M  RN+  ++    
Sbjct: 530 KPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIRQNINFST 589

Query: 657 KVSERLILEGKSEEA 671
           K  + L   G  ++A
Sbjct: 590 KCLQLLFDRGLQDKA 604



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 208/445 (46%), Gaps = 35/445 (7%)

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           +N LI+ Y +    K+++KL + M L G SP  V++ +V+  L K               
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLK--------------- 202

Query: 309 NDSNLFHDQGRIEEAKELVNQM-SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                   +GR   AKE+ ++M    G  PD  TY  ++ GFC+   +D+     ++M  
Sbjct: 203 --------RGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTS 254

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW--WTPNAITYSVVMHGLRREGKL 425
             C P+ V+Y   ++GLC  GK   A  ++N   ++    +P+ +TY+ ++ G  R+ ++
Sbjct: 255 FDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEV 314

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV-NVVNFTS 484
            EA D++ EM  +G  P  V  N LI+ LC   K D  K+ +++    G ++ +   F +
Sbjct: 315 DEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNT 374

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK- 543
           LI   C  G+L+EA  + ++M   +   D+ +Y+ +I  L + G   +A  L  ++  K 
Sbjct: 375 LINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKE 434

Query: 544 ------GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-QKCRTAYNQVIENLCSFG 596
                 G  P   +Y+ +    C+ G+ +   ++L +++ +  +   +Y  VI   C  G
Sbjct: 435 ILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPLSYQIVILGHCKEG 494

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
             E    +L  +LR     D      L++ +L K  PLLA +   +M   +  P      
Sbjct: 495 SYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWH 554

Query: 657 KVSERLILEGKSEEADTLMLRFVER 681
            +  RL+ +G   E+  +++  +ER
Sbjct: 555 SILNRLLEQGCVHESAGVIVMMLER 579



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 94/463 (20%), Positives = 186/463 (40%), Gaps = 57/463 (12%)

Query: 128 FYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LM 183
           FY+      +  DP  + Y  +++ L +    + A  ++  M+++  +  P+  +Y  L+
Sbjct: 246 FYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLI 305

Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL-AGI 242
             Y R  ++  A+ +L  M    + PN++  NT I  L    K  K    LE+M+   G 
Sbjct: 306 RGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGS 365

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
            P+  T+N LI  +C    + +A K+ + M     S D  SY  ++  LC++    +   
Sbjct: 366 IPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEM 425

Query: 303 LMEKMVNDSNLFH-------------------DQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           L +++     L                     + G+ ++A+ ++ Q+ + G   D ++Y 
Sbjct: 426 LFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRG-TQDPLSYQ 484

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            V+ G C+ G  +    +L  M      P+   Y   ++G     K L A+E +    + 
Sbjct: 485 IVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKS 544

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF-----FPTP-------------- 444
            + P   T+  +++ L  +G + E+  V+  M+++       F T               
Sbjct: 545 SYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIRQNINFSTKCLQLLFDRGLQDKA 604

Query: 445 -------------VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
                        V+++ ++Q LC + +   A K +   L     +++     +I   C+
Sbjct: 605 FKITELIYKNGFCVKMDEVVQFLCNKRRALEACKLLLFSLKNNENIDIGLCNIVILDLCK 664

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
                EA SL  ++       D +    ++ AL   GR EEA 
Sbjct: 665 LNKASEAFSLCYELVDKGLHQDLICLNDLVAALEAGGRTEEAA 707


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 202/390 (51%), Gaps = 18/390 (4%)

Query: 187 SRAGKLRNAMYVLSM---MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
           S+  K +N   V+S+   M+   +  +L   N  I+ L   ++   AL  + +M   G  
Sbjct: 77  SKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYE 136

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+V+T + LI G+C  +R+ DAI L+ +M   G  PD V Y T++   CK   + +  +L
Sbjct: 137 PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 196

Query: 304 MEKMVND---------SNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
            ++M  D         ++L       GR  +A  L+  M     +P+V+T+TAV++ F +
Sbjct: 197 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 256

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
            G+  +A K+ ++M      P+  +Y + +NGLC +G+  EA++M++    +   P+ +T
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316

Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
           Y+ +++G  +  ++ E   + REM ++G     +  N +IQ   + G+ D A++      
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD 376

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
           ++    N+  ++ L+ G C    +E+AL L ++M   + + D  TY  +I  + K G VE
Sbjct: 377 SRP---NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVE 433

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           +A +L   +  KGL P VV+Y T+I  +C+
Sbjct: 434 DAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 186/385 (48%), Gaps = 17/385 (4%)

Query: 177 EAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
           + +SY +V     R  +   A+ V+  M K    P+++  ++ I+    GN++  A+  +
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
            +M+  G  P+V+ YN +I G C +  + DA++L D M   G   D V+Y +++  LC  
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222

Query: 295 KRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
            R  +   LM  MV               ++F  +G+  EA +L  +M++    PDV TY
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
            +++NG C  G +D+AK+ML  M   GC P+ V+Y   +NG C + +  E  ++     +
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
                + ITY+ ++ G  + G+   A ++   M  +   P     ++L+  LC   +++ 
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEK 399

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A    +        +++  +  +I G C+ G++E+A  L   +      PD V+YTT+I 
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459

Query: 523 ALSKNGRVEEATELMMKMLSKGLVP 547
              +  + +++  L  KM   GL+P
Sbjct: 460 GFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 192/399 (48%), Gaps = 19/399 (4%)

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ--------- 317
           K+I   PL    P  V +  V+  + K K    V  L   M     + HD          
Sbjct: 59  KMIQSRPL----PSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINC 113

Query: 318 ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
                R   A  +V +M + G  PDVVT ++++NGFC+   +  A  ++ +M   G +P+
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            V Y   ++G C  G   +A E+ +  E +    +A+TY+ ++ GL   G+ S+A  ++R
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           +MV +   P  +    +I    +EGK   A K  +E   +    +V  + SLI G C  G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            ++EA  +LD M      PD VTY T+I+   K+ RV+E T+L  +M  +GLV   +TY 
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           T+I  Y Q GR +   ++  +M S+   RT Y+ ++  LC    +E+A  +   + ++  
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDSRPNIRT-YSILLYGLCMNWRVEKALVLFENMQKSEI 412

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           + D +T ++++      G    A+ +   +  + L PD+
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 155/325 (47%), Gaps = 26/325 (8%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           +R D ++Y  +++   K  L   A  +   M R G+      ++ L+     +G+  +A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            ++  M    + PN++     I V V   K ++A++  E M    + P+V TYN LI G 
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           C   R+ +A +++D M  KGC PD V+Y T++   CK K                     
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK--------------------- 328

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
             R++E  +L  +M+Q G + D +TY  ++ G+ + G  D A+++  +M     +PN  +
Sbjct: 329 --RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRT 383

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y+  L GLC N +  +A  +    ++     +  TY++V+HG+ + G + +A D+ R + 
Sbjct: 384 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443

Query: 437 KKGFFPTPVEINLLIQSLCREGKMD 461
            KG  P  V    +I   CR+ + D
Sbjct: 444 CKGLKPDVVSYTTMISGFCRKRQWD 468



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 171/359 (47%), Gaps = 7/359 (1%)

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +EE  +L  +M Q   +P +V ++ V++   +    D    +   M   G   +  SY  
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +N LC   + + A  ++    +  + P+ +T S +++G  +  ++ +A D+V +M + G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           F P  V  N +I   C+ G ++ A +        G   + V + SL+ G C  G   +A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            L+ DM +    P+ +T+T +ID   K G+  EA +L  +M  + + P V TY ++I+  
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 560 CQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
           C  GRV++  ++L+ M++K  C      YN +I   C    ++E  K+  ++ +     D
Sbjct: 290 CMHGRVDEAKQMLDLMVTK-GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
             T + +++ Y   G P  A ++  RM +R   P+++    +   L +  + E+A  L 
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLF 404


>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 230/496 (46%), Gaps = 29/496 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y+     Y  ML++  K  +   A  +L+ M      C P+A +Y  L+ AY RAG    
Sbjct: 339 YKPGTATYNSMLQVFGKAGVYTEALNILKEMEDN--NCEPDAITYNELVAAYVRAGFHDE 396

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
              V+  M    V PN +   T I+         KAL    +M+  G  PNV TYN ++ 
Sbjct: 397 GAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLV 456

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
                 R +D IK++ +M L GC PD++++ T++  +C EK                   
Sbjct: 457 LLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLA-VCGEK------------------- 496

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G+ +   +++ +M   G  PD  T+  +++ + R G      KM  +M   G  P  
Sbjct: 497 ---GKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCI 553

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            +Y A LN L   G    A  ++    ++ + PN  +YS+++H   + G +     V  E
Sbjct: 554 TTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEME 613

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           +     FP+ + +  L+ +  +  ++ G ++   +  N G  +++V   S++  F +   
Sbjct: 614 IYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQK 673

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           LE+A  +LD +++    P+ VTY ++ID  ++ G   +A E++  + + G+ P VV+Y T
Sbjct: 674 LEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNT 733

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           VI  +C+ G V++ +++L +M +   Q C   +N  +      G   EA +++  ++   
Sbjct: 734 VIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHG 793

Query: 613 SKADASTCHVLVESYL 628
              +  T  ++++ Y+
Sbjct: 794 CMPNELTYKIVIDGYI 809



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 164/371 (44%), Gaps = 13/371 (3%)

Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI-KLIDEM 272
           C T +H      K  +A+   E+M+  G+ P ++TYN ++  Y  + R    I +L+DEM
Sbjct: 240 CTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEM 299

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRI 320
             KG   D+ +  TV+    +E  + E R   + +  +              +F   G  
Sbjct: 300 RSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVY 359

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
            EA  ++ +M    C PD +TY  +V  + R G  D+   ++  M   G  PN ++YT  
Sbjct: 360 TEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTV 419

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           +N     G + +A E+    +E    PN  TY+ V+  L +  +  +   ++ +M   G 
Sbjct: 420 INAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGC 479

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
            P  +  N ++     +GK     + ++E  N G   +   F +LI  + + G   +   
Sbjct: 480 PPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAK 539

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           +  +M      P   TY  +++AL++ G  + A  +++ M  KG  P   +Y  ++H Y 
Sbjct: 540 MYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYS 599

Query: 561 QVGRVEDLLKL 571
           + G V  L K+
Sbjct: 600 KAGNVRGLEKV 610



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 134/579 (23%), Positives = 238/579 (41%), Gaps = 77/579 (13%)

Query: 140 DP--IVYYMMLEILSKTKLCQGAKRVLRL---MARRGIECRPEAFSYLMVAYSRAGKLRN 194
           DP  + Y +ML++  K  + +    +L L   M  +G+E      + ++ A  R G L  
Sbjct: 269 DPTLVTYNVMLDVYGK--MGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDE 326

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A      ++     P     N+ + V        +AL  L+ M+     P+ +TYN L+ 
Sbjct: 327 ARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVA 386

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
            Y       +   +ID M  KG  P+ ++Y TV+                       N +
Sbjct: 387 AYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVI-----------------------NAY 423

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G  ++A E+  QM ++GC+P+V TY  V+    +    +   K+L  M  +GC P+ 
Sbjct: 424 GKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDR 483

Query: 375 VSYTAFLNGLCHNGK----SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +++   L      GK    S   REM N   E    P+  T++ ++    R G   +   
Sbjct: 484 ITWNTMLAVCGEKGKQKFVSQVLREMKNCGFE----PDKETFNTLISAYGRCGSEVDVAK 539

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
           +  EMV  GF P     N L+ +L R G    A+  + +   KG   N  +++ L+  + 
Sbjct: 540 MYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYS 599

Query: 491 QKGD---LEEA----------------LSLLDDMYLCKK----------------DPDTV 515
           + G+   LE+                  +L+   Y C++                  D V
Sbjct: 600 KAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMV 659

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG---RVEDLLKLL 572
              +++    +N ++E+A E++  +   GL P +VTY ++I  Y +VG   + E++LK +
Sbjct: 660 VINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDI 719

Query: 573 EKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           +          +YN VI+  C  G ++EA +IL ++     +    T +  +  Y   G+
Sbjct: 720 QNSGISPDV-VSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGL 778

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
              A +V   M     +P+    K V +  I   K +EA
Sbjct: 779 FAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEA 817



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 184/409 (44%), Gaps = 15/409 (3%)

Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFH 315
           A KL D +P++  S D  +  TV+    +  + K   ++ EKM         V  + +  
Sbjct: 221 ASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLD 280

Query: 316 DQGRIEEAK----ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
             G++  A     EL+++M   G   D  T T V++   R G LD+A++    +  +G K
Sbjct: 281 VYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYK 340

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P T +Y + L      G   EA  ++   E+    P+AITY+ ++    R G   E   V
Sbjct: 341 PGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAV 400

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
           +  M  KG  P  +    +I +  + G  D A +   +    GC  NV  + +++    +
Sbjct: 401 IDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGK 460

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           +   E+ + +L DM L    PD +T+ T++    + G+ +  ++++ +M + G  P   T
Sbjct: 461 RSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKET 520

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
           + T+I  Y + G   D+ K+  +M++     C T YN ++  L   G  + A  ++  + 
Sbjct: 521 FNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMR 580

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           +   K + ++  +L+  Y   G      KV   +++ ++ P   L + +
Sbjct: 581 KKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTL 629



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 128/295 (43%), Gaps = 58/295 (19%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
            Y  +L  L++    + A+ V+  M ++G +    ++S L+  YS+AG +R    V   +
Sbjct: 555 TYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEI 614

Query: 203 QKAAVAP-----------------------------------NLLICNTAIHVLVVGNKL 227
               V P                                   ++++ N+ + + V   KL
Sbjct: 615 YDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKL 674

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
            KA   L+ + ++G+ PN++TYN LI  Y  +     A +++ ++   G SPD VSY TV
Sbjct: 675 EKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTV 734

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +   CK                       +G ++EA  ++++M+  G  P  +T+   ++
Sbjct: 735 IKGFCK-----------------------KGLVQEAIRILSEMTANGVQPCPITFNTFMS 771

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
            +   G   +A ++++ M  HGC PN ++Y   ++G     K  EA + ++  +E
Sbjct: 772 CYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKIKE 826



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 86/181 (47%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y+ D +V   ML +  + +  + A  +L ++   G++     ++ L+  Y+R G    A 
Sbjct: 654 YKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAE 713

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  +Q + ++P+++  NT I        + +A+R L  M   G+ P  +T+N  +  Y
Sbjct: 714 EMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCY 773

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
                  +A ++I  M   GC P++++Y  V+    K K+ KE  D + K+      F D
Sbjct: 774 AGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKIKEIDISFDD 833

Query: 317 Q 317
           Q
Sbjct: 834 Q 834



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 3/208 (1%)

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           +  +++ L RE +   A K       +  +++V   T+++  + + G  + A+ + + M 
Sbjct: 205 VEFMVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMK 264

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEAT-ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
               DP  VTY  ++D   K GR      EL+ +M SKGL     T  TVI    + G +
Sbjct: 265 ETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGIL 324

Query: 566 EDLLKLLEKM-LSKQKCRTA-YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           ++  +  + + L+  K  TA YN +++     G   EA  IL ++     + DA T + L
Sbjct: 325 DEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNEL 384

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPD 651
           V +Y+  G       V   M ++ ++P+
Sbjct: 385 VAAYVRAGFHDEGAAVIDTMASKGVMPN 412


>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
          Length = 486

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 188/376 (50%), Gaps = 12/376 (3%)

Query: 99  LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
           +RN  R L P ++  ++ SQ D  +A++ F  A RQ  ++H    Y+ ++  L + +  +
Sbjct: 91  IRNHSRMLTPARVHKLIASQTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFK 150

Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
             + +++ M + G    P  F  ++  Y   G    A+     M +    P     N  +
Sbjct: 151 TMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLL 210

Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
            VL+    L  AL   +++   GI+PN  TYN LI+ +C   ++  A  L ++M  +GC 
Sbjct: 211 IVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCI 270

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKEL 326
           PD  +Y  +M  LC++ ++K    ++++M+N              N    +  + EA  L
Sbjct: 271 PDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRL 330

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           +++M  MGC PDV+ Y  V+ GFCR G    A ++L+ M  +GC PN +SY   +NGLC+
Sbjct: 331 LSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCN 390

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
            GK  EA++ +       + P+   Y +++ GL  EGK+ EAC+V+  M K+   P    
Sbjct: 391 EGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHEST 450

Query: 447 INLLIQSLCREGKMDG 462
            ++L+  +C + + + 
Sbjct: 451 WSVLLMRICEDSQTEA 466



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 152/313 (48%), Gaps = 7/313 (2%)

Query: 318 GRIEEAKE---LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
           GR  + K    L+ QM + GC      +  ++  +  VG  ++A K   QM   G +P  
Sbjct: 144 GRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLA 203

Query: 375 VSYTAFLNGLCHNGKSLE-AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             +   L  L  + K LE A  +     E   +PN  TY++++       KLS A  +  
Sbjct: 204 KHFNVLLIVLIEH-KCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFN 262

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           +M K+G  P     ++L+Q LCR+ ++  A   + E LNKG   + + + +L+   C+K 
Sbjct: 263 KMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKM 322

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           +L EA  LL  M +   +PD + Y T+I    + GR  +A +++  M   G +P  ++YR
Sbjct: 323 NLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYR 382

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           T+++  C  G+ ++    +E+M+S       + Y+ +I  LC+ G + EA ++L  + + 
Sbjct: 383 TLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQ 442

Query: 612 ASKADASTCHVLV 624
                 ST  VL+
Sbjct: 443 TLAPHESTWSVLL 455



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 123/247 (49%)

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           +E A  L  ++ + G  P+  TY  ++   C   +L  A  +  +M+  GC P+  +Y+ 
Sbjct: 219 LETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSI 278

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            + GLC   +   A  +++    + + P+A+TY+ +++ L R+  L EA  ++ +M   G
Sbjct: 279 LMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMG 338

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  +  N +I   CREG+   A + +++    GC  N +++ +L+ G C +G  +EA 
Sbjct: 339 CNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAK 398

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
             +++M      P    Y  +I  L   G+V EA E+++ M  + L P   T+  ++ R 
Sbjct: 399 DFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRI 458

Query: 560 CQVGRVE 566
           C+  + E
Sbjct: 459 CEDSQTE 465



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 120/239 (50%), Gaps = 25/239 (10%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M ++G     E +S LM    R  +++ A+ VL  M      P+ L  NT ++ L     
Sbjct: 264 MHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMN 323

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           L +A R L +M++ G  P+V+ YN +I G+C   R  DA +++ +MP  GC P+ +SY T
Sbjct: 324 LREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRT 383

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LC E                       G+ +EAK+ V +M   G IP +  Y  ++
Sbjct: 384 LVNGLCNE-----------------------GKFDEAKDFVEEMISNGFIPHISIYHLLI 420

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT-SEEEW 404
            G C  G++ +A ++L  M      P+  +++  L  +C + ++ EARE+++  SE++W
Sbjct: 421 TGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRICEDSQT-EARELVDKLSEDDW 478



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 145/316 (45%), Gaps = 7/316 (2%)

Query: 341 TYTAVVNGFCRVGELDQAKKM---LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           +Y+      C++G   Q K M   +QQM   GC      +   +      G   EA +  
Sbjct: 132 SYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAF 191

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +   E  + P A  ++V++  L     L  A  + +++ + G  P     N+LI++ C  
Sbjct: 192 HQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHS 251

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
            K+  A     +   +GC  +V  ++ L++G C+K  ++ AL +LD+M      PD +TY
Sbjct: 252 DKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTY 311

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
            T++++L +   + EA  L+ KM   G  P V+ Y TVI  +C+ GR  D  ++L  M  
Sbjct: 312 NTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDM-P 370

Query: 578 KQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPL 634
           +  C     +Y  ++  LC+ G  +EA   + +++        S  H+L+    N+G   
Sbjct: 371 ENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVG 430

Query: 635 LAYKVACRMFNRNLIP 650
            A +V   M  + L P
Sbjct: 431 EACEVLVMMTKQTLAP 446



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 2/284 (0%)

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY  ++  L R  +      ++++M K G   TP     +I+     G  + A K   + 
Sbjct: 135 TYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQM 194

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           L  G      +F  L+    +   LE ALSL   ++     P+T TY  +I A   + ++
Sbjct: 195 LEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKL 254

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQV 588
             A  L  KM  +G +P V TY  ++   C+  +V+  L +L++ML+K     A  YN +
Sbjct: 255 SHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTL 314

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           + +LC    L EA ++L K+       D    + ++  +  +G  L A ++   M     
Sbjct: 315 LNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGC 374

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
           +P+    + +   L  EGK +EA   +   +  G I   S  HL
Sbjct: 375 LPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHL 418



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 100/249 (40%), Gaps = 4/249 (1%)

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           + GF  +    + LI  L R  +    +  +Q+    GC      F  +I  + + G   
Sbjct: 126 QPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPN 185

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           EA+     M     +P    +  ++  L ++  +E A  L  K+   G+ P   TY  +I
Sbjct: 186 EAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILI 245

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
             +C   ++     L  KM  KQ C      Y+ +++ LC    ++ A  +L ++L    
Sbjct: 246 RAHCHSDKLSHAYFLFNKM-HKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGY 304

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             DA T + L+ S   K     AY++  +M      PD+     V      EG++ +A  
Sbjct: 305 VPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQ 364

Query: 674 LMLRFVERG 682
           ++    E G
Sbjct: 365 ILRDMPENG 373


>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
 gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
 gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 142/579 (24%), Positives = 257/579 (44%), Gaps = 19/579 (3%)

Query: 65  RVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVA 124
           R VL +D     L     R++++   W P  E  L  L   L  R +  VL+   +  V 
Sbjct: 50  RRVLRKDPNARKLDERFIRILKI-FKWGPDAEKALEVLKLKLDIRLVREVLKIDVEVHVK 108

Query: 125 LQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV 184
           +QFF WA ++  + HD   Y  ++  L + +L     R ++ M +      P   S ++ 
Sbjct: 109 IQFFKWAGKKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVK 168

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG-IT 243
              R   +  A+ +   ++     P     N+ I +L+      K       M   G   
Sbjct: 169 ILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCF 228

Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
           P+ +TY+ LI  +  L+R   A++L DEM   G  P    Y T+MG   K  +++E  +L
Sbjct: 229 PDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNL 288

Query: 304 MEKM-----VNDSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
           + +M     V     + +        GR+E+A  +   M + GC PDVV    ++N   R
Sbjct: 289 VHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGR 348

Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN-GKSLEAREMINTSEEEWWTPNAI 410
              L +A ++ ++M    C PN V+Y   +  L  +     EA   +   +++   P++ 
Sbjct: 349 SDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSF 408

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TYS+++ G  +  ++ +A  ++ EM +KGF P P     LI SL +  + + A +  QE 
Sbjct: 409 TYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQE- 467

Query: 471 LNKGCAVNVVN-FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
           L + C  + V  +  +I+ F + G   EA+ L ++M      PD   Y  +I  + +   
Sbjct: 468 LKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADM 527

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
           ++EA  L   M   G  P + ++  +++   + G  +  +++  KM S   +    +YN 
Sbjct: 528 MDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNT 587

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           V+  L   G  EEA K++ ++     + D  T   ++E+
Sbjct: 588 VLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEA 626



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 176/413 (42%), Gaps = 47/413 (11%)

Query: 313 LFHDQGRIEEAKELVNQMSQMG-CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           +   +G  E+  EL N+M   G C PD VTY+A+++ F ++   D A ++  +M  +G +
Sbjct: 204 MLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQ 263

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P    YT  +      GK  EA  +++        P   TY+ ++ GL + G++ +A  V
Sbjct: 264 PTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGV 323

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG-FC 490
            + M+K G  P  V +N LI  L R  ++  A +  +E     C  NVV + ++I+  F 
Sbjct: 324 YKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFE 383

Query: 491 QKGDLEEALSLLDDMYLCKKD---PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            K    EA S L+ M   KKD   P + TY+ +ID   K  RVE+A  L+ +M  KG  P
Sbjct: 384 DKAPPSEASSWLERM---KKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPP 440

Query: 548 -----------------------------------TVVTYRTVIHRYCQVGRVEDLLKLL 572
                                              +V  Y  +I  + + GR  + + L 
Sbjct: 441 CPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLF 500

Query: 573 EKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
            +M  K  C     AYN +I  +     ++EA  +   +       D ++ ++++     
Sbjct: 501 NEM-KKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLAR 559

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            G P  A ++  +M +  + PD      V   L   G  EEA  LM     +G
Sbjct: 560 TGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKG 612


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 214/424 (50%), Gaps = 35/424 (8%)

Query: 211 LLICNTAIHVLV----VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           L +C T  ++++       K  +AL  L +M      PN +TYN +I G+C   R++ A+
Sbjct: 112 LPLCTTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAAL 167

Query: 267 KLIDEMPLKG-CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKE 325
           +++ EM  +G  +PDK +Y T++   CK                        GR+E+A +
Sbjct: 168 EVMREMRERGGIAPDKYTYATLISGWCK-----------------------IGRMEDAVK 204

Query: 326 LVNQMSQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           + ++M   G + P  V Y A++ G+C VG+LD A +  + M   G      +Y   ++ L
Sbjct: 205 VFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHAL 264

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
             + ++ +A  ++   ++  ++P+  TY+++++G  +EG   +A +V  EM +KG   T 
Sbjct: 265 FMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATA 324

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V    LI    R+G++    +     + KG   +VV + +LI   C  GD+E A  ++ +
Sbjct: 325 VTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAE 384

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M   +  PD +TY T++      GR++EA  L+ +M  +G+ P +V+Y T+I  Y   G 
Sbjct: 385 MEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGD 444

Query: 565 VEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           ++D L++ ++M+ K    T   YN +I+ LC     ++A  ++ +++      D ST   
Sbjct: 445 IKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYIS 504

Query: 623 LVES 626
           L+E 
Sbjct: 505 LIEG 508



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 192/382 (50%), Gaps = 20/382 (5%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM-QLAGITPNVLT 248
           GK   A+ +L  M +    PN +  NT I       ++  AL  +  M +  GI P+  T
Sbjct: 130 GKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYT 185

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKG-CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           Y  LI G+C + R++DA+K+ DEM  KG  +P  V Y  ++G  C   ++       E M
Sbjct: 186 YATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDM 245

Query: 308 VNDS-------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
           V                 LF D  R  +A  ++ +M + G  PDV TY  ++NG+C+ G 
Sbjct: 246 VQRGIAMTVATYNLLMHALFMD-ARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGN 304

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
             +A ++ ++M   G +   V+YT+ +      G+  E   + N + ++   P+ + Y+ 
Sbjct: 305 EKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNA 364

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           +++     G +  A +++ EM KK   P  +  N L++  C  G++D A+  + E   +G
Sbjct: 365 LINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRG 424

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              ++V++ +LI G+  KGD+++AL + D+M     +P  +TY  +I  L K  + ++A 
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAE 484

Query: 535 ELMMKMLSKGLVPTVVTYRTVI 556
            LM +M++KG+ P   TY ++I
Sbjct: 485 NLMKEMVAKGITPDDSTYISLI 506



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 184/391 (47%), Gaps = 27/391 (6%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           R + + Y  ++         Q A  V+R M  RG    P+ ++Y  L+  + + G++ +A
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERG-GIAPDKYTYATLISGWCKIGRMEDA 202

Query: 196 MYVLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           + V   M+ K  VAP+ ++ N  I       KL  AL++ E M   GI   V TYN L+ 
Sbjct: 203 VKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMH 262

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
                 R  DA  +++EM   G SPD  +Y  ++   CKE                    
Sbjct: 263 ALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKE-------------------- 302

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G  ++A E+  +MSQ G     VTYT+++  F R G++ +  ++       G +P+ 
Sbjct: 303 ---GNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDV 359

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
           V Y A +N  C  G    A E++   E++   P+ +TY+ +M G    G+L EA  ++ E
Sbjct: 360 VMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDE 419

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           M K+G  P  V  N LI     +G +  A +   E ++KG    ++ + +LI+G C+   
Sbjct: 420 MTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQ 479

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            ++A +L+ +M      PD  TY ++I+ L+
Sbjct: 480 GDDAENLMKEMVAKGITPDDSTYISLIEGLT 510



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 186/383 (48%), Gaps = 15/383 (3%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVS 376
           G+   A EL+ QM +    P+ VTY  V+ GFC  G +  A +++++M   G   P+  +
Sbjct: 130 GKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYT 185

Query: 377 YTAFLNGLCHNGKSLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           Y   ++G C  G+  +A     EM+   E     P+A+ Y+ ++ G    GKL  A    
Sbjct: 186 YATLISGWCKIGRMEDAVKVFDEMLTKGE---VAPSAVMYNALIGGYCDVGKLDVALQYR 242

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            +MV++G   T    NLL+ +L  + +   A   ++E    G + +V  +  LI G+C++
Sbjct: 243 EDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKE 302

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G+ ++AL + ++M         VTYT++I   S+ G+V+E   L    + KG+ P VV Y
Sbjct: 303 GNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMY 362

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
             +I+ +C  G +E   +++ +M  K+       YN ++   C  G L+EA  ++ ++ +
Sbjct: 363 NALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTK 422

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
              + D  + + L+  Y  KG    A +V   M ++   P L     + + L    + ++
Sbjct: 423 RGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDD 482

Query: 671 ADTLMLRFVERGHIQPKSEEHLQ 693
           A+ LM   V +G I P    ++ 
Sbjct: 483 AENLMKEMVAKG-ITPDDSTYIS 504



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 165/361 (45%), Gaps = 19/361 (5%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
            CA  R QA    AL+       +     D   Y  ++    K    + A +V   M  +
Sbjct: 157 FCARGRVQA----ALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTK 212

Query: 171 GIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLA 228
           G E  P A  Y  L+  Y   GKL  A+     M +  +A  +   N  +H L +  + +
Sbjct: 213 G-EVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARAS 271

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
            A   LE MQ  G +P+V TYN LI GYC     K A+++ +EM  KG     V+Y +++
Sbjct: 272 DAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLI 331

Query: 289 GYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCI 336
               ++ +++E   L    V               N     G +E A E++ +M +    
Sbjct: 332 YVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIP 391

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PD +TY  ++ GFC +G LD+A+ ++ +M   G +P+ VSY   ++G    G   +A  +
Sbjct: 392 PDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRV 451

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
            +   ++ + P  +TY+ ++ GL +  +  +A ++++EMV KG  P       LI+ L  
Sbjct: 452 RDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTT 511

Query: 457 E 457
           E
Sbjct: 512 E 512



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 43/211 (20%)

Query: 498 ALSLLDDMY-----LCKKD--------------------------PDTVTYTTIIDALSK 526
           A +L  D+Y     LC                             P+ VTY T+I     
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCA 159

Query: 527 NGRVEEATELMMKMLSK-GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA- 584
            GRV+ A E+M +M  + G+ P   TY T+I  +C++GR+ED +K+ ++ML+K +   + 
Sbjct: 160 RGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSA 219

Query: 585 --YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
             YN +I   C  G L+ A +    +++       +T ++L+ +         AY V   
Sbjct: 220 VMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEE 279

Query: 643 MFNRNLIPDL--------KLCKKVSERLILE 665
           M      PD+          CK+ +E+  LE
Sbjct: 280 MQKNGFSPDVFTYNILINGYCKEGNEKKALE 310


>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 629

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 143/565 (25%), Positives = 254/565 (44%), Gaps = 52/565 (9%)

Query: 109 RQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA 168
           + I  ++  Q     ALQ F WA    ++ H    Y  +++ L          ++L  M 
Sbjct: 40  QHIAHLILDQNSATKALQTFKWASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMP 99

Query: 169 RR-GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV-VGNK 226
              G     E F  ++    RA  + + + VL ++ K    P+L I N+ + VLV V   
Sbjct: 100 HAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILDVLVKVDID 159

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +A+   + ++M  +G+  +  T+  L+KG C  +RI D  +L+  M  +G  P+ V Y T
Sbjct: 160 VAREF-YRKQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNT 218

Query: 287 VMGYLCKEKRIKEVRDLMEKM--VND-------------SNLFH---------------- 315
           ++  LCK  ++   R LM+++   ND              NL                  
Sbjct: 219 LLHALCKNGKVGRARSLMDEIEEPNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPD 278

Query: 316 ------------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                       + GR+ EA E++ ++   G + DVV Y  ++ GFCR+G++  A + L+
Sbjct: 279 VVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLK 338

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   GC PN  +Y   ++G C +G    A +M N  + +  + N  TY  ++ GL   G
Sbjct: 339 EMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGG 398

Query: 424 KLSEACDVVREM--VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           ++ E   ++  M   K G        N ++  L ++   D A +F+ +   +      V+
Sbjct: 399 RIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKM--EKLFPRAVD 456

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
            +  I GFC+KG ++ A  + D M      P+ + Y  ++    + G + EA ELM +M+
Sbjct: 457 RSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMV 516

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLE 599
             G       +  +IH +C  G+ E  LKLL+ M+ +     R  Y+ +I+ LC  G  +
Sbjct: 517 GHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQ 576

Query: 600 EAGKILGKVLRTASKADASTCHVLV 624
           +A  I  +++      D+ST + L+
Sbjct: 577 KALSIFNQMIEKGITPDSSTWNSLL 601



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 188/404 (46%), Gaps = 22/404 (5%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + + +VY  +L  L K      A+ ++  +     E     F+ L+ AY +   L  A+ 
Sbjct: 210 KPNAVVYNTLLHALCKNGKVGRARSLMDEIE----EPNDVTFNVLIAAYCKEENLVQALV 265

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L         P+++     + +L    ++ +A+  LER++  G   +V+ YN L++G+C
Sbjct: 266 LLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFC 325

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
            L +IK A + + EM  KGC P+  +Y  ++   C         D+   M  D       
Sbjct: 326 RLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFD 385

Query: 312 -------NLFHDQGRIEEAKELVNQM--SQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                   LF   GRIEE  +++  M  S+ G    +  Y +V+ G  +    D+A + L
Sbjct: 386 TYDTLIKGLFFG-GRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFL 444

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            +M      P  V  +  + G C  G    A+ + +    E  TPN + Y  ++HG  +E
Sbjct: 445 MKM--EKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQE 502

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G L EA +++ EMV  G+F      N LI   C +GK + A K + + + +GC  +   +
Sbjct: 503 GNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTY 562

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           + LI   C+KG+ ++ALS+ + M      PD+ T+ +++  LSK
Sbjct: 563 SPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSK 606



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 156/330 (47%), Gaps = 12/330 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D +    ++EIL        A  +L  +  +G      A++ L+  + R GK++ A   L
Sbjct: 278 DVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFL 337

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M++    PN+   N  I           AL     M+  GI+ N  TY+ LIKG    
Sbjct: 338 KEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFG 397

Query: 260 HRIKDAIKLIDEMP-LKGCSPDKVS-YYTVMGYLCKEKRIKEVRDLMEKM------VNDS 311
            RI++ +K+++ M   KG S  ++S Y +V+  L K+    E  + + KM        D 
Sbjct: 398 GRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKMEKLFPRAVDR 457

Query: 312 NL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +L    F ++G ++ AK + +QM   G  P+++ Y  +V+GFC+ G L +A +++ +M  
Sbjct: 458 SLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVG 517

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           HG       + A ++G C  GK   A ++++        P+  TYS ++  L R+G   +
Sbjct: 518 HGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQK 577

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           A  +  +M++KG  P     N L+  L +E
Sbjct: 578 ALSIFNQMIEKGITPDSSTWNSLLIRLSKE 607



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 133/313 (42%), Gaps = 47/313 (15%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +L    +    + A R L+ M R+G     E ++ L+  +  +G    A+ + 
Sbjct: 313 DVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMF 372

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ--LAGITPNVLTYNCL----- 252
           + M+   ++ N    +T I  L  G ++ + L+ LE M+    G    +  YN +     
Sbjct: 373 NDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLY 432

Query: 253 ----------------------------IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
                                       I G+C+   +K+A  + D+M  +G +P+ + Y
Sbjct: 433 KKNMWDEALEFLMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVY 492

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQ 332
             ++   C+E  ++E  +LM +MV                 F  QG+ E A +L++ M  
Sbjct: 493 DCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVG 552

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
            GC+PD  TY+ +++  CR G   +A  +  QM   G  P++ ++ + L  L      LE
Sbjct: 553 RGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSKEIIWLE 612

Query: 393 AREMINTSEEEWW 405
            + + + +++  W
Sbjct: 613 NKNVFHVNKQLEW 625


>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Glycine max]
          Length = 546

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 236/469 (50%), Gaps = 31/469 (6%)

Query: 114 VLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIE 173
           +++ + D + AL  F     Q  ++H+   Y  +L+ L++        RVL  M     +
Sbjct: 99  LIKREKDPQHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETCK 158

Query: 174 CRPEAFSYLMVAYSRAG---KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK--LA 228
                F  LM  +S++    KL +A + +  + +   +P  L  +T +++L+  N+  LA
Sbjct: 159 FHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKAL--STCLNLLLDSNRVDLA 216

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS-PDKVSYYTV 287
           + L    +  L    PNV  +N L+K +C    +  A ++++EM     S P+ V+Y T+
Sbjct: 217 RKLLLHAKRDLTR-KPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTL 275

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           M  LC+  R+KE  DL E+MV+  ++                      +PD +TY  ++N
Sbjct: 276 MDGLCRNGRVKEAFDLFEEMVSRDHI----------------------VPDPLTYNVLIN 313

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           GFCR G+ D+A+ ++Q M  +GC PN  +Y+A ++GLC  GK  +A+ ++   +     P
Sbjct: 314 GFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKP 373

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           +A+TY+ +++ L R GK  EA +++ EM + G     V  N+L+  LCREGK + A   +
Sbjct: 374 DAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMV 433

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
           ++   +G  +N  ++  ++    QK +L+ A  LL  M      P   T   ++  L K 
Sbjct: 434 EKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKA 493

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
           G V++A   +  ++  G  P + T+  +I   C+  ++  + +LL++++
Sbjct: 494 GMVDDAAVALFDLVEMGFQPGLETWEVLIGLICRERKLLYVFELLDELV 542



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 171/319 (53%), Gaps = 7/319 (2%)

Query: 312 NLFHDQGRIEEAKELV-NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
           NL  D  R++ A++L+ +    +   P+V  +  +V   C+ G+LD A +++++M +   
Sbjct: 205 NLLLDSNRVDLARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEF 264

Query: 371 K-PNTVSYTAFLNGLCHNGKSLEAREMIN-TSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
             PN V+Y+  ++GLC NG+  EA ++       +   P+ +TY+V+++G  R GK   A
Sbjct: 265 SYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRA 324

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            +V++ M   G +P     + L+  LC+ GK++ AK  + E    G   + V +TSLI  
Sbjct: 325 RNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINF 384

Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
            C+ G  +EA+ LL++M       D+VT+  ++  L + G+ EEA +++ K+  +G+   
Sbjct: 385 LCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLN 444

Query: 549 VVTYRTVIH---RYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
             +YR V++   + C++ R ++LL L+ +   +    T+ N+++  LC  G +++A   L
Sbjct: 445 KGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATS-NELLVCLCKAGMVDDAAVAL 503

Query: 606 GKVLRTASKADASTCHVLV 624
             ++    +    T  VL+
Sbjct: 504 FDLVEMGFQPGLETWEVLI 522



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 155/324 (47%), Gaps = 6/324 (1%)

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW-TPNAITYSVVMHGLRREGKLSEAC 429
           KP+  + +  LN L  + +   AR+++  ++ +    PN   +++++    + G L  A 
Sbjct: 194 KPSPKALSTCLNLLLDSNRVDLARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAF 253

Query: 430 DVVREMVKKGF-FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV-NVVNFTSLIR 487
           ++V EM    F +P  V  + L+  LCR G++  A    +E +++   V + + +  LI 
Sbjct: 254 EIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLIN 313

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
           GFC+ G  + A +++  M      P+   Y+ ++D L K G++E+A  ++ ++   GL P
Sbjct: 314 GFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKP 373

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
             VTY ++I+  C+ G+ ++ ++LLE+M     Q     +N ++  LC  G  EEA  ++
Sbjct: 374 DAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMV 433

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            K+ +     +  +  +++ S   K     A ++   M  R   P      ++   L   
Sbjct: 434 EKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKA 493

Query: 666 GKSEEADTLMLRFVERGHIQPKSE 689
           G  ++A   +   VE G  QP  E
Sbjct: 494 GMVDDAAVALFDLVEMG-FQPGLE 516



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 171/389 (43%), Gaps = 49/389 (12%)

Query: 321 EEAKELVNQMS-QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           + A  + N +S Q G   +  TY  +++   R        ++L QM +  CK        
Sbjct: 107 QHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETCK---FHEGI 163

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
           F+N + H  KS    ++++             +S+                +VRE     
Sbjct: 164 FVNLMKHFSKSSLHEKLLHA-----------YFSIQ--------------PIVREK---- 194

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQEC---LNKGCAVNVVNFTSLIRGFCQKGDLE 496
             P+P  ++  +  L    ++D A+K +      L +    NV  F  L++  C+ GDL+
Sbjct: 195 --PSPKALSTCLNLLLDSNRVDLARKLLLHAKRDLTR--KPNVCVFNILVKYHCKNGDLD 250

Query: 497 EALSLLDDMYLCKKD-PDTVTYTTIIDALSKNGRVEEATELMMKMLSKG-LVPTVVTYRT 554
            A  ++++M   +   P+ VTY+T++D L +NGRV+EA +L  +M+S+  +VP  +TY  
Sbjct: 251 SAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNV 310

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYN--QVIENLCSFGYLEEAGKILGKVLRTA 612
           +I+ +C+ G+ +    +++ M S       YN   +++ LC  G LE+A  +L ++  + 
Sbjct: 311 LINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSG 370

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
            K DA T   L+      G    A ++   M       D      +   L  EGK EEA 
Sbjct: 371 LKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEAL 430

Query: 673 TLMLRFVERGHIQPKSEEHLQRQRVFLNS 701
            ++ +  ++G    K        R+ LNS
Sbjct: 431 DMVEKLPQQGVYLNKGS-----YRIVLNS 454


>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 142/616 (23%), Positives = 263/616 (42%), Gaps = 87/616 (14%)

Query: 123 VALQFFYWAD--RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
            AL+ F W    ++     +  +  +++ IL K      A  +L  + + G +    A++
Sbjct: 145 TALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYT 204

Query: 181 YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL-VVGNKLAKALRFLERMQL 239
            ++ A++  G+ R A+ V   M++    P L+  N  ++V   +G    K +  ++RM+ 
Sbjct: 205 SMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKS 264

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
           AGI P+  TYN LI      +  ++A  ++ EM L G SPDKV+Y  ++    K +R KE
Sbjct: 265 AGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKE 324

Query: 300 VRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
             +++++M  +             + +   G +E+A EL NQM + G  PDV TYT +++
Sbjct: 325 AMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLS 384

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           GF + G+   A ++ ++M + GCKPN  ++ A +    + GK  E  ++    +    +P
Sbjct: 385 GFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSP 444

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           + +T++ ++    + G  SE   V +EM + GF P     N LI S  R G  D A    
Sbjct: 445 DIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVY 504

Query: 468 QECLNKG-----------------------------------CAVNVVNFTSLIRGFCQK 492
           +  L  G                                   C  N + + SL+  +   
Sbjct: 505 KRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANG 564

Query: 493 GDLEEALSLLDDMY---------LCKK--------------------------DPDTVTY 517
            ++E   +L +++Y         L K                            PD  T 
Sbjct: 565 KEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTL 624

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
             ++    +   V +A E++  M   G  P++ TY ++++ Y +    E   ++L ++L+
Sbjct: 625 NAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILA 684

Query: 578 K--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLL 635
           K  +    +YN VI   C  G + +A ++L ++  +    D  T +  + SY    + + 
Sbjct: 685 KGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVE 744

Query: 636 AYKVACRMFNRNLIPD 651
           A  V C M      P+
Sbjct: 745 AIDVVCYMIKHGCKPN 760



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/497 (22%), Positives = 234/497 (47%), Gaps = 33/497 (6%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           +  D + Y  +L++  K++  + A  VL+ M   G  C P   +Y  L+ AY+R G L +
Sbjct: 302 FSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNG--CPPSIVTYNSLISAYARDGLLED 359

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+ + + M +  + P++    T +       K   A++  E M+  G  PN+ T+N LIK
Sbjct: 360 ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIK 419

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
            + +  +  + +K+ +++    CSPD V++ T++                       ++F
Sbjct: 420 MHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLL-----------------------SVF 456

Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
              G   E   +  +M + G +P+  T+  +++ + R G  DQA  + ++M   G  P+ 
Sbjct: 457 GQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDL 516

Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
            SY A L  L   G   ++ +++   ++    PN +TY  ++H      ++   C +  E
Sbjct: 517 SSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEE 576

Query: 435 MVKKGFFPTPVEIN--LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           +      P  V +   +L+ S C +  M+  + F+ E   +G + ++    +++  + ++
Sbjct: 577 IYSGIIEPRAVLLKTLVLVNSKC-DLLMETERAFL-ELRQRGFSPDITTLNAMVSIYGRR 634

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
             + +A  +LD M      P   TY +++   S++   E + E++ ++L+KG+ P +++Y
Sbjct: 635 QMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISY 694

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLR 610
            TVI+ YC+ GR+ D  ++L +M           YN  I +  +     EA  ++  +++
Sbjct: 695 NTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIK 754

Query: 611 TASKADASTCHVLVESY 627
              K + ST + +V+ Y
Sbjct: 755 HGCKPNQSTYNSIVDWY 771



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 4/178 (2%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           RQ  +  D      M+ I  + ++   A  +L  M R G       ++ LM  YSR+   
Sbjct: 613 RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANF 672

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             +  +L  +    + P+++  NT I+      ++  A R L  M+ +G  P+++TYN  
Sbjct: 673 ERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTF 732

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
           I  Y       +AI ++  M   GC P++ +Y +++ + CK  R    RD     VN+
Sbjct: 733 IASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNR----RDEASMFVNN 786



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 5/210 (2%)

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
           I ++I  L + G++  A   +      G  V+V  +TS+I  F   G   EA+ +   M 
Sbjct: 168 IAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKME 227

Query: 507 LCKKDPDTVTYTTIIDALSKNGRV-EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                P  +TY  I++   K G    +   L+ +M S G+ P   TY T+I   C+ G +
Sbjct: 228 EVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLIS-CCRRGNL 286

Query: 566 -EDLLKLLE--KMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
            E+   +L+  K+      +  YN +++        +EA ++L ++          T + 
Sbjct: 287 YEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNS 346

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           L+ +Y   G+   A ++  +M  + + PD+
Sbjct: 347 LISAYARDGLLEDALELKNQMVEKGIKPDV 376


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 209/415 (50%), Gaps = 29/415 (6%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N  +  L    K  +AL  L +M     +PN +TYN +I G+C   R++  I+++ EM  
Sbjct: 120 NIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEIMREMRE 175

Query: 275 KG-CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQM 333
           +G  +PDK +Y TV+   CK  ++++   + ++M+        +G++E            
Sbjct: 176 RGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLT-------EGKVE------------ 216

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
              P+ V Y A++ G+C  G L+ A +   +M   G      +Y  F++ L   G++ EA
Sbjct: 217 ---PNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEA 273

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
             ++    E+   P+A TY+++++G  +EGK  +A  +   MV KG   T V    LI +
Sbjct: 274 HALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHA 333

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           L  +G +    +   + + +G   ++  + +LI   C  GD++ A  ++ +M   +  PD
Sbjct: 334 LSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPD 393

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
            VTY T++  L   GR++EA  L+ +M  +G+ P +V+Y T+I  Y   G ++D +K+ +
Sbjct: 394 DVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRD 453

Query: 574 KMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           +M+ K    T   YN +I+ LC  G   +A  ++ +++      D ST   L+E 
Sbjct: 454 EMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEG 508



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 198/392 (50%), Gaps = 18/392 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM- 237
           F+ ++     AGK   A+ +L  M     +PN +  NT I       ++   +  +  M 
Sbjct: 119 FNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEIMREMR 174

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG-CSPDKVSYYTVMGYLCKEKR 296
           +  GI P+  TY  +I G+C + +++DA K+ DEM  +G   P+ V Y  ++G  C +  
Sbjct: 175 ERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGN 234

Query: 297 IKEVRDLMEKMVNDS--------NLF-HD---QGRIEEAKELVNQMSQMGCIPDVVTYTA 344
           ++       +MV+          NLF H    +GR  EA  LV +M + G  PD  TY  
Sbjct: 235 LEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNI 294

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           ++NG+C+ G+  +A KM + M   G +   V+YT+ ++ L   G   E   + N +    
Sbjct: 295 LINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRG 354

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P+   Y+ +++     G +  A +++ EM KK   P  V  N L++ LC  G++D A+
Sbjct: 355 IRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEAR 414

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             ++E   +G   ++V++ +LI G+  KGD+++A+ + D+M     +P  +TY  +I  L
Sbjct: 415 GLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGL 474

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
             NG+  +A +L+ +M+  G+ P   TY ++I
Sbjct: 475 CLNGQGGDAEDLVKEMVGNGITPDDSTYISLI 506



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 180/380 (47%), Gaps = 9/380 (2%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVS 376
           G+   A EL+ QM      P+ VTY  V+ GFC  G +    +++++M   G   P+  +
Sbjct: 130 GKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYT 185

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWT-PNAITYSVVMHGLRREGKLSEACDVVREM 435
           Y   ++G C  GK  +A ++ +    E    PNA+ Y+ ++ G   +G L  A     EM
Sbjct: 186 YATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEM 245

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           V +G   T    NL + +L  EG+   A   ++E   KG A +   +  LI G+C++G  
Sbjct: 246 VDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKE 305

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           ++A+ + + M         VTYT++I ALS  G V+E   L    + +G+ P +  Y  +
Sbjct: 306 KKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNAL 365

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I+ +C  G ++   +++ +M  K+       YN ++  LC  G L+EA  ++ ++ +   
Sbjct: 366 INSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGI 425

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
           + D  + + L+  Y  KG    A KV   M  +   P L     + + L L G+  +A+ 
Sbjct: 426 QPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAED 485

Query: 674 LMLRFVERGHIQPKSEEHLQ 693
           L+   V  G I P    ++ 
Sbjct: 486 LVKEMVGNG-ITPDDSTYIS 504



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 156/336 (46%), Gaps = 23/336 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   Y  ++    K    + A +V   M   G +  P A  Y  L+  Y   G L  A+ 
Sbjct: 182 DKYTYATVISGWCKVGKVEDATKVFDEMLTEG-KVEPNAVMYNALIGGYCDQGNLEVALR 240

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
               M    V+  +   N  +H L +  + A+A   +E M   G+ P+  TYN LI GYC
Sbjct: 241 YRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYC 300

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
              + K A+K+ + M  KG     V+Y +++  L  +  ++E     +++ ND+      
Sbjct: 301 KEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQET----DRLFNDAVRRGIR 356

Query: 312 -NLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
            +LF            G ++ A E++ +M +    PD VTY  ++ G C +G LD+A+ +
Sbjct: 357 PDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGL 416

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           +++M   G +P+ VSY   ++G    G   +A ++ +    + + P  +TY+ ++ GL  
Sbjct: 417 IEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCL 476

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
            G+  +A D+V+EMV  G  P       LI+ L  E
Sbjct: 477 NGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTE 512



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 129/269 (47%), Gaps = 27/269 (10%)

Query: 167 MARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           M  +G+   P+AF+Y  L+  Y + GK + AM +  +M    +   ++   + IH L + 
Sbjct: 280 MGEKGLA--PDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMK 337

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
             + +  R        GI P++  YN LI  +C    +  A +++ EM  K  +PD V+Y
Sbjct: 338 GMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTY 397

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            T+M  LC                         GR++EA+ L+ +M++ G  PD+V+Y  
Sbjct: 398 NTLMRGLCL-----------------------LGRLDEARGLIEEMTKRGIQPDLVSYNT 434

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++G+   G++  A K+  +M   G  P  ++Y A + GLC NG+  +A +++       
Sbjct: 435 LISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNG 494

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVR 433
            TP+  TY  ++ GL  E +   A D V+
Sbjct: 495 ITPDDSTYISLIEGLTTEDERLAAGDDVK 523



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 27/215 (12%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
           R   + Y  ++  LS   + Q   R+     RRGI  RP+ F Y  L+ ++   G +  A
Sbjct: 321 RATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGI--RPDLFMYNALINSHCTGGDMDRA 378

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             ++  M+K  + P+ +  NT +  L +  +L +A   +E M   GI P++++YN LI G
Sbjct: 379 FEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISG 438

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
           Y     IKDA+K+ DEM  KG +P  ++Y  ++  LC                      +
Sbjct: 439 YSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLC---------------------LN 477

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
            QG   +A++LV +M   G  PD  TY +++ G  
Sbjct: 478 GQG--GDAEDLVKEMVGNGITPDDSTYISLIEGLT 510



 Score = 46.6 bits (109), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 55/120 (45%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R   D + Y  ++  L        A+ ++  M +RGI+    +++ L+  YS  G +++A
Sbjct: 389 RITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDA 448

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + V   M      P LL  N  I  L +  +   A   ++ M   GITP+  TY  LI+G
Sbjct: 449 VKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEG 508


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 219/493 (44%), Gaps = 33/493 (6%)

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLT 248
           AG LR+++         A AP++ I N+ +  L     L         M+ A + P+V+T
Sbjct: 115 AGFLRDSL------ASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVT 168

Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCS--PDKVSYYTVMGYLCKEKRIKEVRDLMEK 306
           Y  L+ G C    + DA+K++D M   G    PD     TV+  LCK  R+++       
Sbjct: 169 YGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQ------- 221

Query: 307 MVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
               + +F D+ R+             GC P+ VTY  + + FCRVG++  A K++ +M 
Sbjct: 222 ----AIIFVDE-RMRHVH---------GCAPNAVTYNCLADAFCRVGDIGMACKIVARME 267

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP--NAITYSVVMHGLRREGK 424
             G  PN ++    + GLC  G+   A E        W     NA+TYS +         
Sbjct: 268 KEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNN 327

Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
           +  A ++  EM   G  P  V    +I  L + G++  A          G  ++   +  
Sbjct: 328 VDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNI 387

Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
           LI GFC+K  L EA  LL++M      PD  TY T++  L K G      EL+  M+  G
Sbjct: 388 LIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDG 447

Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAG 602
             P+VVT+ T++H YC+ G+ ++ L++   M     Q     YN +I+ LC    ++ A 
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAI 507

Query: 603 KILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERL 662
           K+  ++      A+ +T + L++   +K +   A+++  RM      P+      + E L
Sbjct: 508 KLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWL 567

Query: 663 ILEGKSEEADTLM 675
              G++E     M
Sbjct: 568 PEIGETERLKCFM 580



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 204/451 (45%), Gaps = 65/451 (14%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ A  RAG LR    + + M+ A+V P+++     ++ L     +  AL+ L+RM 
Sbjct: 134 FNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMS 193

Query: 239 LAG--ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM--PLKGCSPDKVSYYTVMGYLCKE 294
             G  + P++   N ++ G C + R++ AI  +DE    + GC+P+ V+Y  +    C+ 
Sbjct: 194 SPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCR- 252

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG- 353
                                  G I  A ++V +M + G  P+V+T   ++ G CRVG 
Sbjct: 253 ----------------------VGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGR 290

Query: 354 ------------------------------------ELDQAKKMLQQMYHHGCKPNTVSY 377
                                                +D A ++  +M  HG +P+ V Y
Sbjct: 291 VGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMY 350

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              ++GL   G+ L+A     + ++  +  +A  Y++++ G  R+ KL EA +++ EM  
Sbjct: 351 FTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKG 410

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
            G  P     N L+  LC+ G      + +   ++ GC  +VV F +L+ G+C+ G  +E
Sbjct: 411 VGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDE 470

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           AL +   M   +  P+TV Y T+ID L K+  V+ A +L  +M  K +   V TY  ++ 
Sbjct: 471 ALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLK 530

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV 588
                   E   +L+++M  +++C   Y  V
Sbjct: 531 GLQDKKMAEKAFELMDRM-REERCTPNYVTV 560



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 196/447 (43%), Gaps = 57/447 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D  ++  +L  L +    +G   +   M  R    +P+  +Y  L+    ++G + +A+ 
Sbjct: 130 DISIFNSLLTALGRAGNLRGMTELFTSM--RDASVKPDVVTYGILLNGLCKSGHVGDALK 187

Query: 198 VLSMMQKAA--VAPNLLICNTAIHVLVVGNKLAKALRFL-ERM-QLAGITPNVLTYNCLI 253
           VL  M      V P++ I NT +  L    +L +A+ F+ ERM  + G  PN +TYNCL 
Sbjct: 188 VLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLA 247

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI--------------KE 299
             +C +  I  A K++  M  +G +P+ ++  T++G LC+  R+               E
Sbjct: 248 DAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPE 307

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV------------------- 340
            R         ++ F     ++ A EL ++M+  G  PD V                   
Sbjct: 308 ARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDAC 367

Query: 341 ----------------TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
                            Y  ++ GFCR  +L +A ++L++M   G +P+  +Y   L+GL
Sbjct: 368 TTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGL 427

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  G      E++    ++   P+ +T+  ++HG  + GK  EA  + R M +    P  
Sbjct: 428 CKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNT 487

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  N LI  LC+  ++D A K   E   K    NV  + +L++G   K   E+A  L+D 
Sbjct: 488 VIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDR 547

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVE 531
           M   +  P+ VT   +++ L + G  E
Sbjct: 548 MREERCTPNYVTVDVLMEWLPEIGETE 574



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 145/354 (40%), Gaps = 43/354 (12%)

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           E A  L + ++     PD+  + +++    R G L    ++   M     KP+ V+Y   
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGIL 172

Query: 381 LNGLC---HNGKSLEAREMINTSEEE---------------------------------- 403
           LNGLC   H G +L+  + +++   +                                  
Sbjct: 173 LNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRH 232

Query: 404 --WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                PNA+TY+ +     R G +  AC +V  M K+G  P  + +N +I  LCR G++ 
Sbjct: 233 VHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVG 292

Query: 462 GAKKFMQE--CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
            A +F +E   +      N V +++L   F    +++ A+ L  +M      PD V Y T
Sbjct: 293 AALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFT 352

Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LS 577
           +I  L++ GR+ +A      M   G       Y  +I  +C+  ++ +  +LLE+M  + 
Sbjct: 353 MISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVG 412

Query: 578 KQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            Q     YN ++  LC  G      ++LG ++    +    T   LV  Y   G
Sbjct: 413 LQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAG 466



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 157/347 (45%), Gaps = 51/347 (14%)

Query: 174 CRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKAL 231
           C P A +Y  L  A+ R G +  A  +++ M+K  VAPN++  NT I  L    ++  AL
Sbjct: 236 CAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAAL 295

Query: 232 RFL--ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT--- 286
            F   +R        N +TY+ L   +   + +  A++L  EM   G  PD V Y+T   
Sbjct: 296 EFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMIS 355

Query: 287 --------------------------------VMGYLCKEKRIKEVRDLMEKMVN----- 309
                                           ++G  C++K++ E  +L+E+M       
Sbjct: 356 GLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQP 415

Query: 310 DSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
           D   ++         G      EL+  M   GC P VVT+  +V+G+C+ G+ D+A ++ 
Sbjct: 416 DVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIF 475

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           + M     +PNTV Y   ++ LC + +   A ++ +   E+    N  TY+ ++ GL+ +
Sbjct: 476 RSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDK 535

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
               +A +++  M ++   P  V +++L++ L   G+ +  K FMQ+
Sbjct: 536 KMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETERLKCFMQQ 582



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 15/255 (5%)

Query: 123 VALQFFY-WADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
           +A++ F+  AD    +R D ++Y+ M+  L++      A      M + G +   +A++ 
Sbjct: 330 MAMELFHEMADHG--HRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNI 387

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           L+  + R  KL  A  +L  M+   + P++   NT +  L      +     L  M   G
Sbjct: 388 LIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDG 447

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             P+V+T+  L+ GYC   +  +A+++   M      P+ V Y T++ +LCK + +    
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAI 507

Query: 302 DLMEKM--------VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            L ++M        V   N       D+   E+A EL+++M +  C P+ VT   ++   
Sbjct: 508 KLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWL 567

Query: 350 CRVGELDQAKKMLQQ 364
             +GE ++ K  +QQ
Sbjct: 568 PEIGETERLKCFMQQ 582



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 8/177 (4%)

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
            + L+R F      E A  L D +      PD   + +++ AL + G +   TEL   M 
Sbjct: 101 LSKLVRRFSSPA--EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMR 158

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK--CR--TAYNQVIENLCSFGY 597
              + P VVTY  +++  C+ G V D LK+L++M S     C      N V++ LC  G 
Sbjct: 159 DASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGR 218

Query: 598 LEEAGKILGKVLR--TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           L++A   + + +R       +A T + L +++   G   +A K+  RM    + P++
Sbjct: 219 LQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNV 275


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 129/501 (25%), Positives = 230/501 (45%), Gaps = 25/501 (4%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R++ +  +   Y  ++ +L K++ C  A  V R M   G     + +S LMV   +   +
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDI 241

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            + M +L  M+   + PN+      I VL    K+ +A   L+RM   G  P+V+TY  L
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 301

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I   C   ++  A ++  +M      PD+V+Y T++       R  + RDL         
Sbjct: 302 IDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLL------DRFSDNRDL--------- 346

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                   +   +  ++M + G +PDVVT+T +V+  C+ G   +A   L  M   G  P
Sbjct: 347 --------DSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILP 398

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N  +Y   + GL    +  +A E+ +  E     P A TY V +    + G    A +  
Sbjct: 399 NLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 458

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            +M  KG  P  V  N  + SL + G+   AK+      + G   + V +  +++ + + 
Sbjct: 459 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 518

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G+++EA+ LL +M     +PD +   ++I+ L K  RV+EA ++ M+M    L PTVVTY
Sbjct: 519 GEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTY 578

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
            T++    + G++++ ++L E M+ K        +N + + LC    +  A K+L K++ 
Sbjct: 579 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD 638

Query: 611 TASKADASTCHVLVESYLNKG 631
                D  T + ++   +  G
Sbjct: 639 MGCVPDVFTYNTIIFGLVKNG 659



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 145/578 (25%), Positives = 244/578 (42%), Gaps = 59/578 (10%)

Query: 140  DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
            D IV   ++  L K      A ++   M  + ++ +P   +Y  L+    + GK++ A+ 
Sbjct: 539  DVIVVNSLINTLYKADRVDEAWKMF--MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 596

Query: 198  VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY- 256
            +   M +    PN +  NT    L   +++  AL+ L +M   G  P+V TYN +I G  
Sbjct: 597  LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 656

Query: 257  ---------CDLHRIK------------------------DAIKLIDEMPLKGCS--PDK 281
                     C  H++K                        DA K+I    L  C+  P  
Sbjct: 657  KNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANF-LYSCADQPAN 715

Query: 282  VSYYTVMGYLCKEKRIKEVRDLMEKMV-------NDSNLF------HDQGRIEEAKELVN 328
            + +  +MG +  E  I       E++V        DS L               A+ L  
Sbjct: 716  LFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFE 775

Query: 329  QMSQ-MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            + ++ +G  P + TY  ++ G      ++ A+ +  Q+ + GC P+  +Y   L+    +
Sbjct: 776  KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKS 835

Query: 388  GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE-MVKKGFFPTPVE 446
            GK  E  E+          PN IT+++V+ GL + G + +A D+  + M  + F PT   
Sbjct: 836  GKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACT 895

Query: 447  INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
               LI  L + G++  AK+  +   + GC  N   +  LI GF + G+ + A +L   M 
Sbjct: 896  YGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 955

Query: 507  LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                 PD  TY+ ++D L   GRV+E      ++   GL P VV Y  +I+   +  R+E
Sbjct: 956  KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLE 1015

Query: 567  DLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
            + L L  +M   +        YN +I NL   G +EEAGKI  ++ R   + +  T + L
Sbjct: 1016 EALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1075

Query: 624  VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
            +  Y   G P  AY V   M      P+    +++  R
Sbjct: 1076 IRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPNR 1113



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 232/541 (42%), Gaps = 68/541 (12%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +  R++ D + Y  +L+  S  +      +    M + G       F+ L+ A  +AG  
Sbjct: 322 KTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 381

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A   L +M+   + PNL   NT I  L+  ++L  AL   + M+  G+ P   TY   
Sbjct: 382 GEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVF 441

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I  Y        A++  ++M  KG +P+ V+    +  L K                   
Sbjct: 442 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK------------------- 482

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                GR  EAK++   +  +G +PD VTY  ++  + +VGE+D+A K+L +M  + C+P
Sbjct: 483 ----AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEP 538

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           + +   + +N L    +  EA +M    +E    P  +TY+ ++ GL + GK+ EA ++ 
Sbjct: 539 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 598

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             MV+KG  P  +  N L   LC+  ++  A K + + ++ GC  +V  + ++I G  + 
Sbjct: 599 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 658

Query: 493 GDLEEALSLLDDMYLCKK--DPDTVTYTTIIDALSKNGRVEEA----------------- 533
           G ++EA+     M   KK   PD VT  T++  + K G +E+A                 
Sbjct: 659 GQVKEAMCFFHQM---KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPAN 715

Query: 534 ---TELMMKMLSKGLVPTVVTY--RTVIHRYCQVGR------------------VEDLLK 570
               +LM  +L++  +   V++  R V +  C+ G                      L +
Sbjct: 716 LFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFE 775

Query: 571 LLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
              K L  Q     YN +I  L     +E A  +  +V  T    D +T + L+++Y   
Sbjct: 776 KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKS 835

Query: 631 G 631
           G
Sbjct: 836 G 836



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 157/370 (42%), Gaps = 2/370 (0%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            G+IEE   + + M +     D  TY  +       G L QA   L++M   G   N  S
Sbjct: 133 DGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYS 192

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   ++ L  +    EA E+      + + P+  TYS +M GL +   +     +++EM 
Sbjct: 193 YNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEME 252

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
             G  P      + I+ L R GK++ A + ++   ++GC  +VV +T LI   C    L+
Sbjct: 253 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 312

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            A  +   M   +  PD VTY T++D  S N  ++   +   +M   G VP VVT+  ++
Sbjct: 313 CAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILV 372

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
              C+ G   +    L+ M  +        YN +I  L     L++A +I   +     K
Sbjct: 373 DALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVK 432

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
             A T  V ++ Y   G  + A +   +M  + + P++  C      L   G+  EA  +
Sbjct: 433 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 492

Query: 675 MLRFVERGHI 684
                + G +
Sbjct: 493 FYGLKDIGLV 502


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 135/551 (24%), Positives = 251/551 (45%), Gaps = 48/551 (8%)

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           ++ A+  LS ++K++  P+ + CN  IH L+  N  A +L+FL  +   G  P+  ++N 
Sbjct: 2   VKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNS 61

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---- 307
           ++   C L ++K A+ ++  MP  GC PD +SY +++   C+   I+    ++E +    
Sbjct: 62  VVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASY 121

Query: 308 --------VNDSNLFHDQGRIEEAKELVNQMSQM--GCIPDVVTYTAVVNGFCRVGELDQ 357
                   V+ + LF+   +++   E+   M  M   C P+VVTY+  ++ FC+ GEL  
Sbjct: 122 GFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKSGELKL 181

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A K    M      PN V++T  ++G C  G       +         + N +TY+ ++ 
Sbjct: 182 ALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALID 241

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  ++G++  A  +   M++    P  +    +I    + G  D A KF+ + LN+G  +
Sbjct: 242 GFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRL 301

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           ++  +  +I G C  G L+EA  +++DM      PD + +TT+++A  K+GR++ A  + 
Sbjct: 302 DITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMY 361

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRV---------------------------EDLLK 570
            K++ +G  P VV   T+I    + G++                           ED ++
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDVMYTVLIDALCKEEDFIE 421

Query: 571 LLEKMLSKQK------CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
            +E++ SK         +  Y   I  LC  G L +A K+  K+++   + D      L+
Sbjct: 422 -VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLI 480

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
               +KG+ + A +V   M    + PD  +   +      EG    A  L+L    RG  
Sbjct: 481 YGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDMQTRGLA 540

Query: 685 QPKSEEHLQRQ 695
           +  S+    +Q
Sbjct: 541 RAVSDADCSKQ 551



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 202/450 (44%), Gaps = 56/450 (12%)

Query: 166 LMARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           L A  G  C+P+  +F+ L   +S+   L      + +M K   +PN++  +T I +   
Sbjct: 117 LRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCC-SPNVVTYSTWIDMFCK 175

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
             +L  AL+    M+   + PNV+T+ CLI GYC    ++  + L +EM     S + V+
Sbjct: 176 SGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVT 235

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
           Y  ++   CK+  ++    +  +M+ D        R+E               P+ + YT
Sbjct: 236 YTALIDGFCKKGEMQRAGGMYLRMLED--------RVE---------------PNSLVYT 272

Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
            ++NGF + G+ D A K L +M + G + +  +Y   ++GLC  GK  EA E++   E+ 
Sbjct: 273 TIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKG 332

Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN--------------- 448
              P+ + ++ +M+   + G++  A ++  +++++GF P  V ++               
Sbjct: 333 DLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392

Query: 449 ---------------LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
                          +LI +LC+E      ++   +    G   +   +TS I G C++G
Sbjct: 393 ISYFCTEKANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQG 452

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           +L +A  L   M     + D   YTT+I  L+  G + EA ++  +ML  G+ P    + 
Sbjct: 453 NLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFD 512

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
            +I  Y + G +     LL  M ++   R 
Sbjct: 513 LLIRAYEKEGNMTTASDLLLDMQTRGLARA 542



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/408 (22%), Positives = 181/408 (44%), Gaps = 28/408 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y   +++  K+   + A +    M R  +      F+ L+  Y +AG L   + +   
Sbjct: 164 VTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEE 223

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M++  ++ N++     I       ++ +A     RM    + PN L Y  +I G+     
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGD 283

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
             +A+K + +M  +G   D  +Y  ++  LC                         G+++
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLC-----------------------GIGKLK 320

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA E+V  M +   +PD++ +T ++N + + G +  A  M  ++   G +P+ V+ +  +
Sbjct: 321 EATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           +G+  NG+  EA     T +      N + Y+V++  L +E    E   +  ++ + G  
Sbjct: 381 DGIAKNGQLHEAISYFCTEK-----ANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLV 435

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P        I  LC++G +  A K   + + +G  +++  +T+LI G   KG + EA  +
Sbjct: 436 PDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQV 495

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
            D+M      PD+  +  +I A  K G +  A++L++ M ++GL   V
Sbjct: 496 FDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDMQTRGLARAV 543



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 147/317 (46%), Gaps = 11/317 (3%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           R+ R   + + Y  +++   K    Q A  +   M    +E     ++ ++  + + G  
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDS 284

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
            NAM  L+ M    +  ++      I  L    KL +A   +E M+   + P+++ +  +
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTM 344

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---------VRDL 303
           +  Y    R+K A+ +  ++  +G  PD V+  T++  + K  ++ E           D+
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDV 404

Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
           M  ++ D+ L  ++  I E + L +++S+ G +PD   YT+ + G C+ G L  A K+  
Sbjct: 405 MYTVLIDA-LCKEEDFI-EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKT 462

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   G + +  +YT  + GL   G  +EAR++ +        P++  + +++    +EG
Sbjct: 463 KMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEG 522

Query: 424 KLSEACDVVREMVKKGF 440
            ++ A D++ +M  +G 
Sbjct: 523 NMTTASDLLLDMQTRGL 539


>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Glycine max]
          Length = 631

 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 141/577 (24%), Positives = 253/577 (43%), Gaps = 19/577 (3%)

Query: 67  VLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQ 126
           VL  D +   L     R++++   W P  E  L  L   + PR +  +L+   +  V +Q
Sbjct: 45  VLRRDPYSRTLDERFIRILKI-FKWGPDAEKALEVLKLKVDPRLVREILKIDVEVSVKIQ 103

Query: 127 FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAY 186
           FF WA ++  + HD   Y  ++  L + ++     + ++ M +      P   S ++   
Sbjct: 104 FFKWAGKRRNFEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRIL 163

Query: 187 SRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM-QLAGITPN 245
            +A  +  A+ V   ++     P     N+ I +L+      K       M       P+
Sbjct: 164 GKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPD 223

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
            +TY+ LI  +  L+R   AI+L DEM   G  P    Y T+MG   K  +++E   L++
Sbjct: 224 TVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVK 283

Query: 306 KMVNDSNLFH------------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
           +M     L                GR+E+A      M + GC PDVV    ++N   R  
Sbjct: 284 EMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSN 343

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL-EAREMINTSEEEWWTPNAITY 412
            L  A K+  +M    C PN V+Y   +  L      L EA       +++   P++ TY
Sbjct: 344 HLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTY 403

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL- 471
           S+++ G  +  ++ +A  ++ EM +KGF P P     LI +L    + D A +  QE   
Sbjct: 404 SILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKE 463

Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
           N GC+   V +  +I+ F + G L EA++L ++M      PD   Y  ++  + +  R++
Sbjct: 464 NCGCSSARV-YAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMD 522

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVI 589
           EA  L   M   G  P + ++  +++   + G  +  L++  KM +   +    ++N ++
Sbjct: 523 EAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTIL 582

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
             L   G  EEA K++ ++     + D  T   ++E+
Sbjct: 583 GCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEA 619



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 196/428 (45%), Gaps = 25/428 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++   +K      A R+   M   G++   + ++ LM  Y + GK+  A+ ++
Sbjct: 223 DTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLV 282

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+       +      I  L    ++  A    + M   G  P+V+  N LI      
Sbjct: 283 KEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRS 342

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
           + ++DAIKL DEM L  C+P+ V+Y T++                       +LF  +  
Sbjct: 343 NHLRDAIKLFDEMKLLNCAPNVVTYNTII----------------------KSLFEAKAP 380

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           + EA     +M + G +P   TY+ +++G+C+   +++A  +L++M   G  P   +Y +
Sbjct: 381 LSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 440

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +N L    +   A E+    +E     +A  Y+V++    + G+L+EA ++  EM K G
Sbjct: 441 LINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLG 500

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P     N L+  + R  +MD A    +     GC  ++ +   ++ G  + G  + AL
Sbjct: 501 CTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGAL 560

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            +   M      PD V++ TI+  LS+ G  EEA +LM +M SKG    ++TY +++   
Sbjct: 561 EMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILE-- 618

Query: 560 CQVGRVED 567
             VG+V+D
Sbjct: 619 -AVGKVDD 625



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 166/338 (49%), Gaps = 20/338 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRNAMYVL 199
             Y  ++  L K+   + A    + M + G  C+P+    + L+    R+  LR+A+ + 
Sbjct: 295 FTYTELIRGLGKSGRVEDAYMTYKNMLKDG--CKPDVVLMNNLINILGRSNHLRDAIKLF 352

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGN-KLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
             M+    APN++  NT I  L      L++A  + ERM+  GI P+  TY+ LI GYC 
Sbjct: 353 DEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCK 412

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL----- 313
            +R++ A+ L++EM  KG  P   +Y +++  L   KR     +L +++  +        
Sbjct: 413 TNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARV 472

Query: 314 -------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                  F   GR+ EA  L N+M ++GC PDV  Y A++ G  R   +D+A  + + M 
Sbjct: 473 YAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTME 532

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
            +GC P+  S+   LNGL   G    A EM    +     P+ ++++ ++  L R G   
Sbjct: 533 ENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFE 592

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
           EA  +++EM  KGF    +  + +++++   GK+D  K
Sbjct: 593 EAAKLMQEMSSKGFQYDLITYSSILEAV---GKVDDCK 627



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 175/413 (42%), Gaps = 47/413 (11%)

Query: 313 LFHDQGRIEEAKELVNQM-SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           +   +G  E+  EL N+M S++ C PD VTY+A+++ F ++   D A ++  +M  +G +
Sbjct: 197 MLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQ 256

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           P    YT  +      GK  EA  ++             TY+ ++ GL + G++ +A   
Sbjct: 257 PTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMT 316

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG-FC 490
            + M+K G  P  V +N LI  L R   +  A K   E     CA NVV + ++I+  F 
Sbjct: 317 YKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFE 376

Query: 491 QKGDLEEALSLLDDMYLCKKD---PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            K  L EA S  + M   KKD   P + TY+ +ID   K  RVE+A  L+ +M  KG  P
Sbjct: 377 AKAPLSEASSWFERM---KKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 433

Query: 548 -----------------------------------TVVTYRTVIHRYCQVGRVEDLLKLL 572
                                              +   Y  +I  + + GR+ + + L 
Sbjct: 434 CPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLF 493

Query: 573 EKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
            +M  K  C     AYN ++  +     ++EA  +   +       D ++ ++++     
Sbjct: 494 NEM-KKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLAR 552

Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            G P  A ++  +M N  + PD+     +   L   G  EEA  LM     +G
Sbjct: 553 TGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKG 605


>gi|356528212|ref|XP_003532699.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37230-like [Glycine max]
          Length = 738

 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 159/659 (24%), Positives = 297/659 (45%), Gaps = 88/659 (13%)

Query: 81  VCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHD 140
           +C+++  R AW+ +L+  +R+L+    P  +  VL   A    ALQF+ W +R   + H 
Sbjct: 60  ICKMMSNR-AWTTRLQNSIRSLVPEFDPSLVYNVLHGAASPEHALQFYRWVERAGLFTHT 118

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIE---CRPEAFSYLMVAYSRAGKLRNAMY 197
           P     +++IL +      A+ +L    R G        +AF  L+ +Y RAG ++ ++ 
Sbjct: 119 PETTLKIVQILGRYSKLNHARCILFDDTRGGASRATVTEDAFVSLIDSYGRAGIVQESVK 178

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +   M++  V   +   +    V++   +   A R+   M    + P   TYN L+ G  
Sbjct: 179 LFKKMKELGVDRTVKSYDALFKVILRRGRYMMAKRYYNAMLNESVEPTRHTYNILLWGMF 238

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
              R+  A++  ++M  +G  PD V+Y T++ GY     R K                  
Sbjct: 239 LSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYF----RFK------------------ 276

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
             ++EEA++L  +M     +P+V+++T ++ G+   G++D A K+ ++M   G KPN V+
Sbjct: 277 --KVEEAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGQIDDALKVFEEMKGCGVKPNAVT 334

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTP--NAITYSVVMHGLRREGKLSEACDVVRE 434
           ++  L GLC   K  EAR+++    E +  P  NA+ +  +M    + G L  A DV++ 
Sbjct: 335 FSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDNAV-FMKLMSCQCKAGDLDAAGDVLKA 393

Query: 435 MVK------------------------------------------KGFFPT------PVE 446
           M++                                          K  + T      P  
Sbjct: 394 MIRLSIPTEAGHYGVLIENFCKANLYDKAEKLLDKMIEKEIVLRQKNAYETELFEMEPSA 453

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            NL+I  LC  G+   A+ F ++ + KG   + V+F +LI G  ++G+ + A  ++  M 
Sbjct: 454 YNLMIGYLCEHGRTGKAETFFRQLMKKGVQ-DSVSFNNLICGHSKEGNPDSAFEIIKIMG 512

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                 D  +Y  +I++  + G   +A   +  ML  G +P    YR+V+      GRV+
Sbjct: 513 RRGVARDADSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVMESLFDDGRVQ 572

Query: 567 DLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKV-LRTASKADASTCHVL 623
              ++++ M+ K  ++     ++V+E L   G++EEA   LG++ L   +  +    H L
Sbjct: 573 TASRVMKSMVEKGVKENMDLVSKVLEALLMRGHVEEA---LGRIHLLMLNGCEPDFDH-L 628

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +     K   + A K+   +  R+ I D  +  KV + L+  GK+  A +++ + +E+G
Sbjct: 629 LSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDALLAAGKTLNAYSILCKILEKG 687



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 124/528 (23%), Positives = 240/528 (45%), Gaps = 37/528 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           AKR    M    +E     ++ L+     + +L  A+     M+   + P+++  NT I+
Sbjct: 211 AKRYYNAMLNESVEPTRHTYNILLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLIN 270

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                 K+ +A +    M+   I PNV+++  ++KGY    +I DA+K+ +EM   G  P
Sbjct: 271 GYFRFKKVEEAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGQIDDALKVFEEMKGCGVKP 330

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMV------NDSNLFH-------DQGRIEEAKEL 326
           + V++ T++  LC  +++ E RD++ +MV       D+ +F          G ++ A ++
Sbjct: 331 NAVTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDNAVFMKLMSCQCKAGDLDAAGDV 390

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
           +  M ++    +   Y  ++  FC+    D+A+K+L +M                     
Sbjct: 391 LKAMIRLSIPTEAGHYGVLIENFCKANLYDKAEKLLDKMIE------------------- 431

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
             K +  R+  N  E E +      Y++++  L   G+  +A    R+++KKG     V 
Sbjct: 432 --KEIVLRQK-NAYETELFEMEPSAYNLMIGYLCEHGRTGKAETFFRQLMKKG-VQDSVS 487

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            N LI    +EG  D A + ++    +G A +  ++  LI  + +KG+  +A + LD M 
Sbjct: 488 FNNLICGHSKEGNPDSAFEIIKIMGRRGVARDADSYRLLIESYLRKGEPADAKTALDGML 547

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                P++  Y +++++L  +GRV+ A+ +M  M+ KG+   +     V+      G VE
Sbjct: 548 ESGHLPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGVKENMDLVSKVLEALLMRGHVE 607

Query: 567 DLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           + L  +  +L    C   ++ ++  LC       A K+L  VL      D S    ++++
Sbjct: 608 EALGRIH-LLMLNGCEPDFDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDA 666

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            L  G  L AY + C++  +    D     ++ + L  EG +++AD L
Sbjct: 667 LLAAGKTLNAYSILCKILEKGGSTDWSSRDELIKSLNQEGNTKQADVL 714


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 131/539 (24%), Positives = 260/539 (48%), Gaps = 71/539 (13%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I   ++++   +  L +  +R++  +   G       F+ L+  Y +AG++  A+ ++
Sbjct: 111 DTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLV 170

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA------------------- 240
             M+K  +  +++  NT I+      +  KA   L  +  +                   
Sbjct: 171 ERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDD 230

Query: 241 --GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
              +  +++TY  +I  YC  H +++A  L +EM + G  PD V+Y +++  LCK+ R+ 
Sbjct: 231 NLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLS 290

Query: 299 EVRDL---MEKMVNDSN----------LF------------------------------- 314
           E ++L   M+KM  D N          LF                               
Sbjct: 291 EAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLV 350

Query: 315 ---HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                  + +EA+++   +S++  IP+ +TYTA+++G+C+VG++++ + +LQ+M      
Sbjct: 351 DGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHIN 410

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN ++Y++ +NG    G   EA  ++    ++   PNA  Y++++ G  + GK   A D+
Sbjct: 411 PNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDL 470

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             EM   G     V  ++L+ +L R  +MD A++ +++  ++G  ++ VN+TSL+ GF +
Sbjct: 471 YNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFK 530

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
            G    AL+++++M       D VTY  +I+ L ++G+  EA  +   M+  GL P   T
Sbjct: 531 AGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQAT 589

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKV 608
           Y  +I  YC+ G +++ L+L  +M S +   ++   N ++  L   G +E+A  +L ++
Sbjct: 590 YNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEM 648



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 257/539 (47%), Gaps = 25/539 (4%)

Query: 157 CQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
           C+    +L L   R ++   +  +Y  V   + + G +  A   LS+M K     + + C
Sbjct: 56  CKMGNLILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITC 115

Query: 215 NTAIHVLVVGN---KLAK-ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           N    +LV G     LAK   R ++ +   G   +V+ +N LI GYC    +  A+ L++
Sbjct: 116 N----ILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVE 171

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHDQGRIEEAKE 325
            M  +G   D VSY T++   CK     + + L+ ++     V DS  F+   RI++   
Sbjct: 172 RMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDN 231

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L  +        D++TYT +++ +C+   L++A+ + ++M  +G  P+ V+Y++ +NGLC
Sbjct: 232 LNLE-------ADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLC 284

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
            +G+  EA+E++   ++    PN + Y+ ++  L + G   EA     ++V +G     V
Sbjct: 285 KDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLV 344

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               L+  L +  K   A+   +         N + +T+LI G+C+ GD+E   SLL +M
Sbjct: 345 MCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEM 404

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                +P+ +TY++II+  +K G ++EA  +M KML + ++P    Y  +I  YC+ G+ 
Sbjct: 405 EEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQ 464

Query: 566 EDLLKLLEKM-LSKQKCRTA-YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           E    L  +M LS  K     ++ ++ NL     ++EA ++L  V       D      L
Sbjct: 465 EIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSL 524

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           ++ +   G    A  +   M  +++  D+     +   L+  GK  EA ++    +E G
Sbjct: 525 MDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMG 582



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/515 (24%), Positives = 241/515 (46%), Gaps = 26/515 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  ++  L K      A+ +LR M + G++    A++ L+ +  +AG    A    
Sbjct: 272 DVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQ 331

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           S +    +  +L++C T +  L   +K  +A      +    + PN +TY  LI GYC +
Sbjct: 332 SQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKV 391

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             ++    L+ EM  K  +P+ ++Y +++    K+  + E  ++M+KM+ D N+      
Sbjct: 392 GDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKML-DQNI------ 444

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                           IP+   Y  +++G+C+ G+ + A  +  +M   G K N V +  
Sbjct: 445 ----------------IPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDV 488

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +N L    +  EA E++          + + Y+ +M G  + GK S A ++V EM +K 
Sbjct: 489 LVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKS 548

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
                V  N+LI  L   GK + AK      +  G A N   +  +I+ +C++G+L+ AL
Sbjct: 549 IPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNAL 607

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
            L ++M   K  P ++T  T++  LS+ G +E+A  ++ +M   G+ P +V +R +++  
Sbjct: 608 ELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNAS 667

Query: 560 CQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
            + G+   +L++ E++  +  +  + AYN +I   C     ++A  +L  ++R    AD 
Sbjct: 668 SKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADT 727

Query: 618 STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
            T + L+  Y        A     +M N  + P++
Sbjct: 728 VTYNALIRGYCESSHVKKALATYTQMLNEGVSPNI 762



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 123/521 (23%), Positives = 236/521 (45%), Gaps = 48/521 (9%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M+K  + P LL+ N  I+       +++       M  + + PNV T+N L+  +C +  
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD----- 316
           +  A+ L+  + ++    D V+Y TV+   C+   + +    +  MV     F       
Sbjct: 61  LILALDLLRNVDVE---VDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 317 -------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                   G  +  + +++ +   G   DV+ +  +++G+C+ GE+  A  ++++M   G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA-------------------- 409
              + VSY   +NG C  G+  +A+ +++   E     ++                    
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 410 -ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
            ITY+ ++    ++  L EA  +  EM+  GF P  V  + ++  LC++G++  A++ ++
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E    G   N V +T+LI    + G   EA +    + +     D V  TT++D L K+ 
Sbjct: 298 EMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSS 357

Query: 529 RVEEATELMMKMLSK-GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAY 585
           + +EA E M + LSK  L+P  +TY  +I  YC+VG +E +  LL++M  K        Y
Sbjct: 358 KPKEA-EDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITY 416

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
           + +I      G L+EA  ++ K+L      +A    +L++ Y   G      ++A  ++N
Sbjct: 417 SSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAG----KQEIATDLYN 472

Query: 646 RNLIPDLKLCKKVSERLILEGKS----EEADTLMLRFVERG 682
              +  LK+   + + L+   K     +EA+ L+     RG
Sbjct: 473 EMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRG 513



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 131/546 (23%), Positives = 243/546 (44%), Gaps = 59/546 (10%)

Query: 142 IVYYMMLEILSKTKLCQG---------AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           +V  M L+++  T L  G         A+ + R +++  +      ++ L+  Y + G +
Sbjct: 335 VVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDM 394

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
                +L  M++  + PN++  ++ I+       L +A+  +++M    I PN   Y  L
Sbjct: 395 ERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAIL 454

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----- 307
           I GYC   + + A  L +EM L G   + V +  ++  L + KR+ E  +L++ +     
Sbjct: 455 IDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGL 514

Query: 308 ----VNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
               VN ++L   F   G+   A  +V +M++     DVVTY  ++NG    G+  +AK 
Sbjct: 515 LLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKS 573

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           +   M   G  PN  +Y   +   C  G+   A E+ N  +     P++IT + ++ GL 
Sbjct: 574 VYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLS 633

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK-----------MDGAKKFMQE 469
             G++ +A +V+ EM   G  P  V   +L+ +  + GK           +D   K  QE
Sbjct: 634 EAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQE 693

Query: 470 CLNK------------------------GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N                         G   + V + +LIRG+C+   +++AL+    M
Sbjct: 694 AYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQM 753

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                 P+ VTY  ++  L   G + E  EL  KM   GL P   TY T+I  Y ++G  
Sbjct: 754 LNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNK 813

Query: 566 EDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
           ++ ++L  +M+++      + YN +I +    G +++A ++L ++        +ST  +L
Sbjct: 814 KESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDIL 873

Query: 624 VESYLN 629
           +  + N
Sbjct: 874 ICGWCN 879


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 229/491 (46%), Gaps = 11/491 (2%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           ++L +L  +++   A+ V   M   GI      F+ ++ +  +AG L     +   M++ 
Sbjct: 244 IVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRR 303

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            +  + +  N  I+      K+ +A RF   MQ +G      ++N LI+GYC      +A
Sbjct: 304 NIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEA 363

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHDQGRI 320
             + DEM   G  P   +Y   +  LC+  RI + R+L+  M     V+ + L H   ++
Sbjct: 364 WGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAPDVVSYNTLMHGYIKM 423

Query: 321 E---EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
               EA  L + +      P +VTY  +++G C  G L+ A+++ ++M      P+ ++Y
Sbjct: 424 RKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITY 483

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
           T  L G   NG    A E+ +    +   P+   Y+    G  R G   +A  +  EMV 
Sbjct: 484 TTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVA 543

Query: 438 KGFFPTPVEI-NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +      + I N+ I  LC+ G ++ A +F ++    G   + V +T++IRG+ +KG  +
Sbjct: 544 EDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFK 603

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            A  L D+M   +  P  +TY  +I   +K GR+E+A +   +M  +G+ P V+T+  ++
Sbjct: 604 MARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 663

Query: 557 HRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           H  C+ G +++  + L KM  +     + +Y  +I   C     EE  K+  ++L    +
Sbjct: 664 HGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIE 723

Query: 615 ADASTCHVLVE 625
            D  T   L +
Sbjct: 724 PDGYTHRALFK 734



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 144/588 (24%), Positives = 245/588 (41%), Gaps = 93/588 (15%)

Query: 123 VALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYL 182
           +A +FF W  RQ   +     +  MLEIL++  L   A     L+A R I         L
Sbjct: 137 IAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAY----LVAERSINLGMHEIDDL 192

Query: 183 MV------------------AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           ++                   Y++       +     M +    P++  CN  + VL   
Sbjct: 193 LIDGNFDKLVALKLLDLLLWVYTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDS 252

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKG---YCDLHRIKDAIKLIDEMPLKGCSPDK 281
             + KA    E M + GI P V+T+N ++       DL R+ D I L  EM  +     +
Sbjct: 253 RMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERV-DKIWL--EMKRRNIEFSE 309

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
           V+Y  ++                       N F   G++EEA+     M + G      +
Sbjct: 310 VTYNILI-----------------------NGFSKSGKMEEARRFHGDMQRSGFPVTPYS 346

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           +  ++ G+C+ G  D+A  +  +M + G  P T +Y  ++  LC  G+  +ARE++++  
Sbjct: 347 FNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMA 406

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                P+ ++Y+ +MHG  +  K  EA  +  ++      P+ V  N LI  LC  G ++
Sbjct: 407 ----APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLE 462

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT-- 519
           GA++  +E  ++    +V+ +T+L++GF + G+L  A  + D+M      PD   YTT  
Sbjct: 463 GAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRT 522

Query: 520 ----------------------------------IIDALSKNGRVEEATELMMKMLSKGL 545
                                              ID L K G +E+A E   K+   GL
Sbjct: 523 VGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGL 582

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGK 603
           VP  VTY TVI  Y + GR +    L ++MLSK+   +   Y  +I      G LE+A +
Sbjct: 583 VPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQ 642

Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
              ++ +   + +  T + L+      G    AY+  C+M    + P+
Sbjct: 643 YSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPN 690



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 212/454 (46%), Gaps = 23/454 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           I +  ML+   K    +   ++   M RR IE     ++ L+  +S++GK+  A      
Sbjct: 275 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGD 334

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           MQ++         N  I          +A    + M  AGI P   TYN  I+  C+  R
Sbjct: 335 MQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGR 394

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR----DLMEKMVNDSNLFHD- 316
           I DA +L+  M     +PD VSY T+M    K ++  E      DL    +N S + ++ 
Sbjct: 395 IDDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNT 450

Query: 317 -------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                   G +E A+ L  +M+     PDV+TYT ++ GF + G L  A ++  +M   G
Sbjct: 451 LIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKG 510

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
            KP+  +YT    G    G S +A     EM+    E+   P+   Y+V + GL + G L
Sbjct: 511 IKPDGYAYTTRTVGELRLGDSEKAFRLHEEMV---AEDHHAPDLTIYNVRIDGLCKVGNL 567

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            +A +  R++ + G  P  V    +I+    +G+   A+    E L+K  + +V+ +  L
Sbjct: 568 EKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVL 627

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G  + G LE+A     +M      P+ +T+  ++  + K G ++EA   + KM  +G+
Sbjct: 628 IHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGI 687

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
            P   +Y  +I ++C + + E+++KL ++ML K+
Sbjct: 688 SPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKE 721



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 198/435 (45%), Gaps = 31/435 (7%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y +++   SK+   + A+R    M R G    P +F+ L+  Y + G    A  V   
Sbjct: 310 VTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDE 369

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M  A + P     N  I  L    ++  A   L  M      P+V++YN L+ GY  + +
Sbjct: 370 MLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMRK 425

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SN 312
             +A  L D++     +P  V+Y T++  LC+   ++  + L E+M +          + 
Sbjct: 426 FVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTT 485

Query: 313 L---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY--- 366
           L   F   G +  A E+ ++M + G  PD   YT    G  R+G+ ++A ++ ++M    
Sbjct: 486 LLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAED 545

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
           HH   P+   Y   ++GLC  G   +A E           P+ +TY+ V+ G   +G+  
Sbjct: 546 HHA--PDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFK 603

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
            A D+  EM+ K   P+ +   +LI    + G+++ A ++  E   +G   NV+   +L+
Sbjct: 604 MARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 663

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKD-----PDTVTYTTIIDALSKNGRVEEATELMMKML 541
            G C+ G+++EA       YLCK +     P+  +YT +I       + EE  +L  +ML
Sbjct: 664 HGMCKAGNIDEAYR-----YLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEML 718

Query: 542 SKGLVPTVVTYRTVI 556
            K + P   T+R + 
Sbjct: 719 DKEIEPDGYTHRALF 733



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 13/305 (4%)

Query: 391 LEAREMINTSEEEWWT-------PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
           L    M+N ++E + T       P  IT++ ++    + G L     +  EM ++    +
Sbjct: 249 LRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFS 308

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V  N+LI    + GKM+ A++F  +    G  V   +F  LI G+C++G  +EA  + D
Sbjct: 309 EVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTD 368

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M      P T TY   I AL + GR+++A EL+  M +    P VV+Y T++H Y ++ 
Sbjct: 369 EMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMR 424

Query: 564 RVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           +  +   L + + +         YN +I+ LC  G LE A ++  ++       D  T  
Sbjct: 425 KFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYT 484

Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
            L++ ++  G   +A ++   M  + + PD       +   +  G SE+A  L    V  
Sbjct: 485 TLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAE 544

Query: 682 GHIQP 686
            H  P
Sbjct: 545 DHHAP 549



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 121/265 (45%), Gaps = 13/265 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  +L+   K      A  +   M R+GI+    A++   V   R G    A  + 
Sbjct: 479 DVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLH 538

Query: 200 S-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
             M+ +   AP+L I N  I  L     L KA+ F  ++   G+ P+ +TY  +I+GY +
Sbjct: 539 EEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 598

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV---------RDLMEKMVN 309
             R K A  L DEM  K  SP  ++Y+ ++    K  R+++          R +   ++ 
Sbjct: 599 KGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 658

Query: 310 DSNLFHDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
            + L H     G I+EA   + +M + G  P+  +YT +++  C + + ++  K+ ++M 
Sbjct: 659 HNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEML 718

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSL 391
               +P+  ++ A    L  + +S+
Sbjct: 719 DKEIEPDGYTHRALFKHLEKDHESM 743


>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 218/450 (48%), Gaps = 28/450 (6%)

Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWR-YRHDPIVYYMMLEILSKTKLCQGAKRVL 164
           L P+++ +++  Q +  +ALQ F  A +  R + H+   Y  M+E LSK +  +  + ++
Sbjct: 99  LSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLI 158

Query: 165 RLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
             + +  I+C    F  ++  Y  AG+ + A+     +    + P++   NT ++ LV  
Sbjct: 159 SQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQN 218

Query: 225 NKLAKA-LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
            +     L F    +  GI PNV T N L+K  C  + I  AI++++EMP  G  P+ V+
Sbjct: 219 KRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVT 278

Query: 284 YYTVMG-YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
           Y T++G Y+ K                        G +  A+ +  ++   G +PD  TY
Sbjct: 279 YTTILGGYVSK------------------------GDMVGARRVFGEILDRGWVPDPTTY 314

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           T +++G+C+ G    A K++ +M  +  +PN V+Y   +   C   KS E   +++   E
Sbjct: 315 TILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLE 374

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
           + + P++     V+  L  EGK+  AC++ ++++KK   P     + LI  LC+EGK+  
Sbjct: 375 KKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWE 434

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A+K   E   KG   + + + +LI G C+ G+L EA  L D+M      P+  TY  +I 
Sbjct: 435 ARKLFDE-FEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIK 493

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
              K G   E   +M +ML  G +P   TY
Sbjct: 494 GFCKVGNAREGIRVMEEMLDNGCLPNKATY 523



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 167/401 (41%), Gaps = 58/401 (14%)

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           +I+ Y    R K AI+    +P  G  P   S+ T++  L + KR     DL+  M    
Sbjct: 176 VIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF----DLVHLMFK-- 229

Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
                           N   + G +P+V T   +V   C+  ++D A ++L++M   G  
Sbjct: 230 ----------------NCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMG-- 271

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
                                            + PN +TY+ ++ G   +G +  A  V
Sbjct: 272 ---------------------------------FIPNVVTYTTILGGYVSKGDMVGARRV 298

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             E++ +G+ P P    +L+   C++G+   A K M E        N V +  +I  +C+
Sbjct: 299 FGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCK 358

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
           +    E L+LLDDM   K  P +     +ID L + G+VE A EL  K+L K   P    
Sbjct: 359 EKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAI 418

Query: 552 YRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-AYNQVIENLCSFGYLEEAGKILGKVLR 610
             T+IH  C+ G+V +  KL ++        T  YN +I  +C  G L EA ++   ++ 
Sbjct: 419 TSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVE 478

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
                +A T ++L++ +   G      +V   M +   +P+
Sbjct: 479 KGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 38/250 (15%)

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           K G  P     N+L+++LC++  +D A + ++E    G   NVV +T+++ G+  KGD+ 
Sbjct: 234 KFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMV 293

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            A  +  ++      PD  TYT ++D   K GR  +A ++M +M    + P  VTY  +I
Sbjct: 294 GARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVII 353

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASK 614
             YC+  +  ++L LL+ ML K+   ++    +VI+ LC  G +E A ++  K+L+    
Sbjct: 354 EAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLK---- 409

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
                                          +N  PD  +   +   L  EGK  EA  L
Sbjct: 410 -------------------------------KNCTPDNAITSTLIHWLCKEGKVWEARKL 438

Query: 675 MLRFVERGHI 684
              F E+G I
Sbjct: 439 FDEF-EKGSI 447


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/596 (24%), Positives = 267/596 (44%), Gaps = 64/596 (10%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y ++ ++Y+++     K+     A  V + M   GI      +S LMV++ +   +   +
Sbjct: 179 YTYNGLIYFLV-----KSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVL 233

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           ++L+ M+   V PN+      I VL    +  +A + L +M+ +G  P+V+T+  +I+  
Sbjct: 234 WLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVL 293

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           CD  R+ DA  +  +M      PD+V+Y T++         + V ++   MV D   ++D
Sbjct: 294 CDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADG--YND 351

Query: 317 Q--------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                          GR++EA  + ++M + G  P+  +Y ++++GF +    D+A ++ 
Sbjct: 352 NIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELF 411

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
             M   G  PN  ++  F+N    +G+SL+A +     + +   P+    + V+  L R 
Sbjct: 412 NHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARS 471

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G+L  A  V  E+   G  P  +   ++I+   +  K D A  F  + +  GC  +V+  
Sbjct: 472 GRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLAL 531

Query: 483 TSLI-----------------------------------RGFCQKGDLEEALSLLDDMYL 507
            SLI                                    G  ++G ++E + LL++M  
Sbjct: 532 NSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTH 591

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ +TY T++D LSKNG V  A  ++  M  KG  P + +Y TV++   +  R E+
Sbjct: 592 SIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEE 651

Query: 568 LLKLLEKMLSKQKCRTAYNQVIENLCSF---GYLEEAGKILGK-VLRTASKADASTCHVL 623
             ++  +M  K+     Y  +   L SF   G ++EA   + + +L+     D S+ H L
Sbjct: 652 AFRMFCQM--KKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSL 709

Query: 624 VESYLNKGIPLLAYKVACRMFNRN-LIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           +E  LNK     + + A  + +R  L+ D  LC  +   L    K+ EA  L  +F
Sbjct: 710 MEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLI-RHLCKHKKALEAHQLFNKF 764



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 147/611 (24%), Positives = 257/611 (42%), Gaps = 50/611 (8%)

Query: 110 QICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR 169
            +  +LRS      AL+ F  A RQ    H       MLE++          +V  LM +
Sbjct: 77  SVVHMLRSAPGPAEALELFTAAARQPTAVHTTESCNYMLELMRAHGRVGDMAQVFDLMQK 136

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           + ++     F+ +       G LR+A   L +M++A ++ N    N  I+ LV     A+
Sbjct: 137 QIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAE 196

Query: 230 A-----------------------------------LRFLERMQLAGITPNVLTYNCLIK 254
           A                                   L  L  M+  G+ PNV +Y   I+
Sbjct: 197 AMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIR 256

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------- 307
                 R  +A +++ +M   GC PD V++  V+  LC   R+ + +D+  KM       
Sbjct: 257 VLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKP 316

Query: 308 --VNDSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
             V    L     D G  +   E+ N M   G   ++V+YTAVV+  C+VG LD+A  + 
Sbjct: 317 DRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVF 376

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            +M   G  P   SY + ++G         A E+ N       +PN  T+ + ++   + 
Sbjct: 377 DEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKS 436

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G+  +A      M  KG  P     N ++ SL R G++  AK+   E  + G + + + +
Sbjct: 437 GQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITY 496

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
           T +I+   +    +EA++   DM      PD +   ++ID L K G+  EA +L  ++  
Sbjct: 497 TMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKE 556

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
             + PT  TY T++    + G+V++++ LLE+M           YN V++ L   G +  
Sbjct: 557 MKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNC 616

Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
           A  +L  +       D S+ + ++   + +     A+++ C+M  + L PD      +  
Sbjct: 617 AIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM-KKILAPDYATLCTILP 675

Query: 661 RLILEGKSEEA 671
             +  G  +EA
Sbjct: 676 SFVKNGLMKEA 686



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 128/575 (22%), Positives = 245/575 (42%), Gaps = 89/575 (15%)

Query: 112  CAVLRSQADERVALQFFYWADR-QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
            C    S+ADE  A+ FF  +D  +     D +    +++ L K      A ++   +   
Sbjct: 502  CCSKASKADE--AMNFF--SDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEM 557

Query: 171  GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
             IE     ++ L+    R GK++  M++L  M  +   PNL+  NT +  L    ++  A
Sbjct: 558  KIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCA 617

Query: 231  LRFLERMQLAGITPNVLTYNCLIKG-------------YCDLHRI--------------- 262
            +  L  M   G TP++ +YN ++ G             +C + +I               
Sbjct: 618  IGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSF 677

Query: 263  ------KDAIKLIDEMPLKG-CSPDKVSYYTVMG-------------------------- 289
                  K+A+  + E  LK  C+ DK S++++M                           
Sbjct: 678  VKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLN 737

Query: 290  ---------YLCKEKRIKEVRDLMEKMVN-----DSNLFH-------DQGRIEEAKELVN 328
                     +LCK K+  E   L  K         +  ++       D+  I+ A++L  
Sbjct: 738  DFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFT 797

Query: 329  QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            +M ++GC PD  TY  +++   +   +++  ++  +M+  G +   V+Y   ++GL  + 
Sbjct: 798  EMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSK 857

Query: 389  KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
            +  +A ++      E ++P   TY  ++ GL + GK+ +A ++  EM++ G  P     N
Sbjct: 858  RLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYN 917

Query: 449  LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            +L+      G  +   +  ++ + +G   ++ ++T LI   C  G L + LS    +   
Sbjct: 918  ILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLEL 977

Query: 509  KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              +PD + Y  +ID L K+ R+EEA  L  +M  KG+VP + TY ++I    + G+  + 
Sbjct: 978  GLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEA 1037

Query: 569  LKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEA 601
             ++ E++L K  +     YN +I      G  + A
Sbjct: 1038 AQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNA 1072



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 170/373 (45%), Gaps = 17/373 (4%)

Query: 215  NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
            N+ I  LV  N +  A      M+  G  P+  TYN ++       RI++ +++  EM  
Sbjct: 777  NSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHR 836

Query: 275  KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEE 322
            KG     V+Y T++  L K KR+++  DL   ++++             +     G++ +
Sbjct: 837  KGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVD 896

Query: 323  AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
            A+ L N+M + GC P+   Y  ++NG    G  +   ++ ++M   G  P+  SYT  ++
Sbjct: 897  AENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLID 956

Query: 383  GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
             LC  G+  +         E    P+ I Y++++ GL +  ++ EA  +  EM KKG  P
Sbjct: 957  TLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVP 1016

Query: 443  TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
                 N LI  L + GK   A +  +E L KG   NV  + +LIRG+   G  + A +  
Sbjct: 1017 NLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAY 1076

Query: 503  DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
            D + +          T +I  L     +  A  L  +M  +G  P   TY  ++    + 
Sbjct: 1077 DCVAV-----GVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKS 1131

Query: 563  GRVEDLLKLLEKM 575
             R+E++LK+ E++
Sbjct: 1132 MRIEEMLKVQEEI 1144



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 102/471 (21%), Positives = 184/471 (39%), Gaps = 69/471 (14%)

Query: 65   RVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADER-- 122
            R +L  D F  PL+R +C+    ++  + +L  + + L  SLK     +++R   DE   
Sbjct: 732  RGILLNDFFLCPLIRHLCK--HKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLI 789

Query: 123  -VALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
             +A   F    R      D   Y ++L+ + K+   +   RV   M R+G E     ++ 
Sbjct: 790  DIAEDLFTEMKR-LGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNT 848

Query: 182  LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
            ++    ++ +L  A+ +   +     +P        +  L+   K+  A      M   G
Sbjct: 849  IISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYG 908

Query: 242  ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
              PN   YN L+ G+      ++  ++ ++M  +G +PD  SY  ++  LC         
Sbjct: 909  CKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCT-------- 960

Query: 302  DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                            GR+ +      Q+ ++G  PD++ Y  +++G  +   +++A  +
Sbjct: 961  ---------------AGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCL 1005

Query: 362  LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
              +M   G  PN  +Y + +  L   GK+ EA +M      + W PN  TY         
Sbjct: 1006 FNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTY--------- 1056

Query: 422  EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
                                      N LI+     G  D A     +C+  G ++    
Sbjct: 1057 --------------------------NALIRGYSVSGSTDNAYA-AYDCVAVGVSLK--- 1086

Query: 482  FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
             T+LI G   +  +  A  L  +M      PD  TY  I+DA+ K+ R+EE
Sbjct: 1087 -TALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEE 1136



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 30/199 (15%)

Query: 144  YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
            Y ++++ L             R +   G+E     ++ L+    ++ ++  A+ + + M+
Sbjct: 951  YTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMK 1010

Query: 204  KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC------ 257
            K  + PNL   N+ I  L    K ++A +  E + + G  PNV TYN LI+GY       
Sbjct: 1011 KKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTD 1070

Query: 258  ------------------------DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
                                    D + I  A  L  EM  +GC PD+ +Y  ++  + K
Sbjct: 1071 NAYAAYDCVAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGK 1130

Query: 294  EKRIKEVRDLMEKMVNDSN 312
              RI+E+  + E++  D N
Sbjct: 1131 SMRIEEMLKVQEEIAEDLN 1149


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 213/454 (46%), Gaps = 19/454 (4%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           ++  Y   G L     +L++M    ++PN  I N           + KA+    +M+  G
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           ++P+ ++Y  LI   C L R+ DA    ++M  +G +P+ V + +++  LC   + ++V 
Sbjct: 61  LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120

Query: 302 DLMEKMVN----DSNLFHD--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
           +L  +M+N     + +F +        +GR+ E + LV+ +  MG  PDV++Y  +++G 
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C  G +D+A K+L+ M   G KPN+ SY   L+G C  G+   A  +         TP  
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGV 240

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           +TY+ ++HGL +  + SEA ++   M+  G        N ++  LC+   +D A K  Q 
Sbjct: 241 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQS 300

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
             +KG  +N++ FT +I    + G  E+A+ L   +      PD VTY  + + L + G 
Sbjct: 301 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGS 360

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED----LLKLLEKMLSKQKCRTAY 585
           +EE   L   M   G  P       ++ R    G +      L KL E+  S +   T+ 
Sbjct: 361 LEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTS- 419

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
             +I    S  Y   A K L K  R  ++A++S 
Sbjct: 420 -MLISIFSSDEYQHHA-KSLPKKYRILNEANSSA 451



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 188/379 (49%), Gaps = 5/379 (1%)

Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           + ++G + E  +L+N M   G  P+   +    + + + G +D+A  +  +M  HG  P+
Sbjct: 5   YGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPD 64

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
            VSY A ++ LC  G+  +A    N    E  TPN + +S +++GL    K  +  ++  
Sbjct: 65  AVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFF 124

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           EM+  G  P  V  N ++ +LC+EG++   ++ +      G   +V+++ +LI G C  G
Sbjct: 125 EMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAG 184

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
            ++EA  LL+ M      P++ +Y T++    K GR++ A  L  KMLS G+ P VVTY 
Sbjct: 185 TIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYN 244

Query: 554 TVIHRYCQVGRVEDLLKLLEKML---SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
           T++H   Q  R  +  +L   M+   +K    T YN ++  LC    ++EA K+   +  
Sbjct: 245 TILHGLFQTKRFSEAKELYLNMINSGTKWGIYT-YNTILNGLCKSNCVDEAFKMFQSLCS 303

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
              + +  T  +++ + L  G    A  +   +    L+PD+   + V+E LI EG  EE
Sbjct: 304 KGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEE 363

Query: 671 ADTLMLRFVERGHIQPKSE 689
            D+L    +E+    P S+
Sbjct: 364 FDSL-FSAMEKNGTAPNSQ 381



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 189/412 (45%), Gaps = 27/412 (6%)

Query: 224 GNK--LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
           GNK  L++    L  M   GI+PN   +N     Y     I  A+ + ++M   G SPD 
Sbjct: 6   GNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDA 65

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
           VSY  ++  LCK                        GR+++A+   NQM   G  P++V 
Sbjct: 66  VSYGALIDALCK-----------------------LGRVDDAEVKFNQMINEGVTPNIVV 102

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           ++++V G C + + ++ +++  +M + G  PN V +   L  LC  G+ +E + ++++ E
Sbjct: 103 FSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIE 162

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                P+ I+Y+ ++ G    G + EA  ++  MV  G  P     N L+   C+ G++D
Sbjct: 163 CMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRID 222

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A    ++ L+ G    VV + +++ G  Q     EA  L  +M          TY TI+
Sbjct: 223 SAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTIL 282

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           + L K+  V+EA ++   + SKGL   ++T+  +I    + GR ED + L   + +    
Sbjct: 283 NGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLV 342

Query: 582 R--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
                Y  V ENL   G LEE   +   + +  +  ++   + LV   L++G
Sbjct: 343 PDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 394



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 158/370 (42%), Gaps = 14/370 (3%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           RQ     D + Y  +++ L K      A+     M   G+      FS L+       K 
Sbjct: 57  RQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKW 116

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
                +   M    + PN++  NT +  L    ++ +  R ++ ++  G+ P+V++YN L
Sbjct: 117 EKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTL 176

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS- 311
           I G+C    I +A KL++ M   G  P+  SY T++   CK  RI     L  KM+++  
Sbjct: 177 IDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGI 236

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                        LF  + R  EAKEL   M   G    + TY  ++NG C+   +D+A 
Sbjct: 237 TPGVVTYNTILHGLFQTK-RFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAF 295

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           KM Q +   G + N +++T  +  L   G+  +A ++          P+ +TY VV   L
Sbjct: 296 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENL 355

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
             EG L E   +   M K G  P    +N L++ L   G +  A  ++ +   +  +V  
Sbjct: 356 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEA 415

Query: 480 VNFTSLIRGF 489
              + LI  F
Sbjct: 416 STTSMLISIF 425



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 171/379 (45%), Gaps = 19/379 (5%)

Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
           ++ +     +K  +   A  +   M + G+   P+A SY  L+ A  + G++ +A    +
Sbjct: 32  IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLS--PDAVSYGALIDALCKLGRVDDAEVKFN 89

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
            M    V PN+++ ++ ++ L   +K  K       M   GI PN++ +N ++   C   
Sbjct: 90  QMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEG 149

Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---------DS 311
           R+ +  +L+D +   G  PD +SY T++   C    I E   L+E MV+          +
Sbjct: 150 RVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYN 209

Query: 312 NLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
            L H     GRI+ A  L  +M   G  P VVTY  +++G  +     +AK++   M + 
Sbjct: 210 TLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 269

Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
           G K    +Y   LNGLC +    EA +M  +   +    N IT+++++  L + G+  +A
Sbjct: 270 GTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDA 329

Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
            D+   +   G  P  V   ++ ++L  EG ++            G A N     +L+R 
Sbjct: 330 MDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR 389

Query: 489 FCQKGDLEEA---LSLLDD 504
              +GD+  A   LS LD+
Sbjct: 390 LLHRGDISRAGAYLSKLDE 408


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/534 (25%), Positives = 245/534 (45%), Gaps = 28/534 (5%)

Query: 95  LEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKT 154
           +E  L  L+  L    I +V++ + + ++  +FF WA R+ R R     + +++++LS+ 
Sbjct: 47  IEPALEPLVPFLSKNIITSVIKEEVNRQLGFRFFIWASRRERLRSGE-SFGLVIDMLSED 105

Query: 155 KLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
             C    + L  +   G+      F  L+ AY++ G    A+     M++    P++   
Sbjct: 106 NGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTY 165

Query: 215 NTAIHVLVVGNKLAK-ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
           N  + +++  +     A      M     +PN+ T+  L+ G     R  DA K+ D+M 
Sbjct: 166 NVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMT 225

Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIE 321
            +G SP++V+Y  ++  LC+    ++ R L  +M    N             F   GR+ 
Sbjct: 226 GRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMV 285

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA EL+    + G +  +  Y+++++G  R     QA ++   M     KP+ + YT  +
Sbjct: 286 EAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILI 345

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
            GL   GK  +A +++ +   +  TP+   Y+ V+  L   G L E   +  EM +   F
Sbjct: 346 QGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF 405

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P      +LI S+CR G +  A++   E    GC+ +V  F +LI G C+ G+L+EA  L
Sbjct: 406 PDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465

Query: 502 LDDMYLCKKDPDTV------TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           L  M + +  P ++      +     D + ++G + +A + +      G  P +V+Y  +
Sbjct: 466 LHKMEVGR--PASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVL 523

Query: 556 IHRYCQVGRVEDLLKLLE----KMLSKQKCRTAYNQVIENLCSFGYLEEAGKIL 605
           I+ +C+ G ++  LKLL     K LS       YN +I  L   G  EEA K+ 
Sbjct: 524 INGFCREGDIDGALKLLNVLQLKGLSPDS--VTYNTLINGLHRVGREEEAFKLF 575



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 122/527 (23%), Positives = 219/527 (41%), Gaps = 65/527 (12%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y +++  L +    + A+++   M   G      A + L+  + + G++  A  +L +
Sbjct: 234 VTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRL 293

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
            +K      L   ++ I  L    +  +A      M    I P+++ Y  LI+G     +
Sbjct: 294 FEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGK 353

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           I+DA+KL+  MP KG +PD   Y  V+  LC                        +G +E
Sbjct: 354 IEDALKLLRSMPSKGITPDTYCYNAVIKALC-----------------------GRGLLE 390

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           E + L  +MS+    PD  T+T ++   CR G + +A+++  ++   GC P+  ++ A +
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALI 450

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR------REGKLSEACDVVREM 435
           +GLC +G+  EAR +++  + E   P ++   +   G R      + G + +A   +   
Sbjct: 451 DGLCKSGELKEARLLLH--KMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHF 508

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
              G  P  V  N+LI   CREG +DGA K +     KG + + V + +LI G  + G  
Sbjct: 509 ADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGRE 568

Query: 496 EEALSLL---DDM------------YLCKKDPDTVTYTTIIDALS--------------- 525
           EEA  L    DD             + C++    V +   +  L                
Sbjct: 569 EEAFKLFYAKDDFRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDETANEIEQ 628

Query: 526 --KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
             K G  E A   ++++ ++    T+  Y   +   CQ GR  + L +   +  K+   T
Sbjct: 629 CFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVT 688

Query: 584 AYN--QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
             +  ++I  LC    L+ A  +    L    K     C+ L+ S L
Sbjct: 689 PPSCVKLIHGLCKREQLDAAIDVFLYTLDNNFKLMPRVCNYLLSSLL 735



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 167/357 (46%), Gaps = 9/357 (2%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           + + ++   G   D   +  +++ + ++G  ++A +   +M    C+P+  +Y   L  +
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIM 172

Query: 385 CHNGKS-LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
                  + A  + N   +   +PN  T+ ++M GL ++G+ S+A  +  +M  +G  P 
Sbjct: 173 MREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            V   +LI  LC+ G  + A+K   E    G   + V   +L+ GFC+ G + EA  LL 
Sbjct: 233 RVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292

Query: 504 DMYLCKKDPDTVT---YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
              L +KD   +    Y+++ID L +  R  +A EL   ML + + P ++ Y  +I    
Sbjct: 293 ---LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLS 349

Query: 561 QVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
           + G++ED LKLL  M SK      Y  N VI+ LC  G LEE   +  ++  T S  DA 
Sbjct: 350 KAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDAC 409

Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           T  +L+ S    G+   A ++   +      P +     + + L   G+ +EA  L+
Sbjct: 410 THTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 3/193 (1%)

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A ++ ++M  C   P+  T+  ++D L K GR  +A ++   M  +G+ P  VTY  +I 
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
             CQ G  ED  KL  +M +        A+N +++  C  G + EA ++L    +     
Sbjct: 242 GLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
                  L++          A+++   M  RN+ PD+ L   + + L   GK E+A  L+
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLL 361

Query: 676 LRFVERGHIQPKS 688
                +G I P +
Sbjct: 362 RSMPSKG-ITPDT 373


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 144/555 (25%), Positives = 246/555 (44%), Gaps = 67/555 (12%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I   ++++   +  L Q A+ V+  +   G+       + L+  Y  AG +  A  ++
Sbjct: 196 DSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELI 255

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM-------------------QLA 240
               ++ V  +++  NT +        L +A      +                   ++ 
Sbjct: 256 ENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIK 315

Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
            + P ++TY  LI  YC    ++++  L  +M + G  PD V+  +++   C+  ++ E 
Sbjct: 316 NLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEA 375

Query: 301 RDLMEKM------------VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
             L  +M                N     GR+ EA  L +QM   G   D+VT T V++G
Sbjct: 376 AVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDG 435

Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
             +VG+  +A+++ + +      PN V+Y+A L+G C  GK   A  ++   E+E   PN
Sbjct: 436 LFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPN 495

Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
            IT+S +++G  ++G LS+A DV+REMV++   P  +   +LI    + G+ D A  F +
Sbjct: 496 VITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCK 555

Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
           E  ++    + V F  L+    + G ++EA SL+ DMY    DPD V Y ++ID   K G
Sbjct: 556 EMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEG 615

Query: 529 R-------VEEATE---------------------------LMMKMLSKGLVPTVVTYRT 554
                   V+E  E                           +  +M+  GL P  +TY T
Sbjct: 616 NQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNT 675

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I+ YC  G+ ED L +L +M S      A  YN +I  LC  G +E+A   L ++L   
Sbjct: 676 IINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVME 735

Query: 613 SKADASTCHVLVESY 627
                 T   LV++Y
Sbjct: 736 FVPTPITHKFLVKAY 750



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 231/504 (45%), Gaps = 52/504 (10%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            +S L+  Y + GK+  A  VL  M+K  V PN++  ++ I+       L+KA+  L  M
Sbjct: 463 TYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREM 522

Query: 238 QLAGITPNVLTYNCLIKGYCD-----------------------------------LHRI 262
               + PN + Y  LI GY                                     + R+
Sbjct: 523 VQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRM 582

Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKE---VRDLMEKMVNDSNLFHD-- 316
            +A  LI +M  KG  PD V+Y +++ GY  +  ++     V+++ EK +    + ++  
Sbjct: 583 DEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL 642

Query: 317 -QGRIE----EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
            +G +     + + + ++M ++G  PD +TY  ++N +C  G+ + A  +L +M  +G  
Sbjct: 643 IKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIM 702

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
           PN V+Y   + GLC  G   +A   ++      + P  IT+  ++    R  K  +   +
Sbjct: 703 PNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQI 762

Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
             ++V  G   +    N LI   CR G    AK  + E + +G + ++V + +LIRG+C 
Sbjct: 763 HEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCT 822

Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS----KGLVP 547
              +E+AL     M++    P+  TY T++  LS  G +EE  E   K++S    +GLVP
Sbjct: 823 GSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVP 882

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKIL 605
              TY  ++  Y +VG  +  + L  +M++K    T   YN +I +    G + EA ++L
Sbjct: 883 NAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELL 942

Query: 606 GKVLRTASKADASTCHVLVESYLN 629
             +L      ++ T  +L   +LN
Sbjct: 943 NDLLTKGRIPNSFTYDILTCGWLN 966



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 137/572 (23%), Positives = 255/572 (44%), Gaps = 28/572 (4%)

Query: 140 DP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           DP  + Y  ++  L K+     A  +   M  RGI       + +M    + GK + A  
Sbjct: 388 DPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEE 447

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   + K  +APN +  +  +       K+  A   L++M+   + PNV+T++ +I GY 
Sbjct: 448 VFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYA 507

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYL-----------CKE---KRIKEVRD 302
               +  A+ ++ EM  +   P+ + Y  ++ GY            CKE   +R++E   
Sbjct: 508 KKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNV 567

Query: 303 LMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
           + + ++N+       GR++EA+ L+  M   G  PD+V Y ++++G+ + G    A  ++
Sbjct: 568 IFDILLNN---LKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIV 624

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           Q+M     + + V+Y A + GL   GK  + R + +   E    P+ ITY+ +++    +
Sbjct: 625 QEMKEKNIRFDVVAYNALIKGLLRLGK-YDPRYVCSRMIELGLAPDCITYNTIINTYCIK 683

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           GK  +A D++ EM   G  P  V  N+LI  LC+ G ++ A+  + E L        +  
Sbjct: 684 GKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITH 743

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
             L++ + +    ++ L + + +     +     Y T+I    + G   +A  ++ +M+ 
Sbjct: 744 KFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVK 803

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEE 600
           +G+   +VTY  +I  YC    VE  LK   +M         T YN ++  L + G +EE
Sbjct: 804 RGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEE 863

Query: 601 AGKILGKVLRTASK----ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
             +   K++   ++     +A+T  +LV  Y   G       +   M  +  +P LK   
Sbjct: 864 MMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYN 923

Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
            +       GK  EA  L+   + +G I P S
Sbjct: 924 VLISDYAKSGKMIEARELLNDLLTKGRI-PNS 954



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 221/509 (43%), Gaps = 34/509 (6%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F  L+  Y    +   A    S M+   + P L   NT ++       +++       M 
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G+ P+V + N L+   C +  +  A+  +    +     D V+Y TV+   C++  + 
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDV--VDIDNVTYNTVIWGFCQKGLVD 179

Query: 299 EVRDLMEKMVNDSNLFHD------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           +   L+ +MV     F               G ++ A+ ++  +   G   DV+    ++
Sbjct: 180 QGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLI 239

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +G+C  G + QA ++++  +    K + V+Y   L   C  G    A  + N     W  
Sbjct: 240 DGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFW-- 297

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
                        + E +L    DVV +   K   PT V    LI + C+   ++ +   
Sbjct: 298 -------------KDEDRLKNN-DVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSL 343

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            ++ +  G   +VV  +S++ GFC+ G L EA  L  +MY    DP+ V+Y TII++L K
Sbjct: 344 YKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFK 403

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS---KQKCRT 583
           +GRV EA  L  +M+ +G+   +VT  TV+    +VG+ ++  ++ E +L       C T
Sbjct: 404 SGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVT 463

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            Y+ +++  C  G +E A  +L K+ +     +  T   ++  Y  KG+   A  V   M
Sbjct: 464 -YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREM 522

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEAD 672
             RN++P+  +   + +     G+ + AD
Sbjct: 523 VQRNVMPNTIVYAILIDGYFKAGEQDVAD 551



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 145/615 (23%), Positives = 259/615 (42%), Gaps = 115/615 (18%)

Query: 176 PEAFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+ FS  ++ +S  + G L  A+  L       V  + +  NT I        + +    
Sbjct: 127 PDVFSVNVLVHSLCKVGDLDLALGYLR--NNDVVDIDNVTYNTVIWGFCQKGLVDQGFGL 184

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIK------------------------------ 263
           L  M   G+  + +T N L+KGYC +  ++                              
Sbjct: 185 LSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCE 244

Query: 264 -----DAIKLIDEMPLKGCSPDKVSYYTVMGYLCK--------------------EKRIK 298
                 A +LI+         D V+Y T++   CK                    E R+K
Sbjct: 245 AGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLK 304

Query: 299 --------EVRDLMEKMVNDSNLFHDQGR---IEEAKELVNQMSQMGCIPDVVTYTAVVN 347
                   E+++L   +V  + L     +   +EE+  L  +M   G +PDVVT ++++ 
Sbjct: 305 NNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILY 364

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           GFCR G+L +A  + ++MY  G  PN VSY   +N L  +G+ +EA  + +       + 
Sbjct: 365 GFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISF 424

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           + +T + VM GL + GK  EA +V   ++K    P  V  + L+   C+ GKM+ A+  +
Sbjct: 425 DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVL 484

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA---- 523
           Q+   +    NV+ F+S+I G+ +KG L +A+ +L +M      P+T+ Y  +ID     
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544

Query: 524 -------------------------------LSKNGRVEEATELMMKMLSKGLVPTVVTY 552
                                          L + GR++EA  L++ M SKG+ P +V Y
Sbjct: 545 GEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNY 604

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVL 609
            ++I  Y + G     L ++++M  ++  R    AYN +I+ L   G  +    +  +++
Sbjct: 605 ASLIDGYFKEGNQLAALSIVQEM-KEKNIRFDVVAYNALIKGLLRLGKYDPR-YVCSRMI 662

Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
                 D  T + ++ +Y  KG    A  +   M +  ++P+      +   L   G  E
Sbjct: 663 ELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVE 722

Query: 670 EADT-----LMLRFV 679
           +A++     L++ FV
Sbjct: 723 KAESALDEMLVMEFV 737



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 154/375 (41%), Gaps = 28/375 (7%)

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
           L HD  R   A    + M  +G +P +  +  ++  F   G + Q K M   M   G  P
Sbjct: 70  LTHD--RFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVP 127

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           +  S    ++ LC  G    A   +  ++      + +TY+ V+ G  ++G + +   ++
Sbjct: 128 DVFSVNVLVHSLCKVGDLDLALGYLRNNDVV--DIDNVTYNTVIWGFCQKGLVDQGFGLL 185

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
            EMVK+G     +  N+L++  CR G +  A+  M   ++ G   +V+   +LI G+C+ 
Sbjct: 186 SEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEA 245

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
           G + +A  L+++ +      D VTY T++ A  K G +  A  L  ++L           
Sbjct: 246 GLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILG---------- 295

Query: 553 RTVIHRYCQVGRVEDLLK-----LLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGK 607
                      + ED LK        ++ + Q     Y  +I   C F  +EE+  +  K
Sbjct: 296 ---------FWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKK 346

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           ++      D  TC  ++  +   G    A  +   M+   L P+      +   L   G+
Sbjct: 347 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 406

Query: 668 SEEADTLMLRFVERG 682
             EA  L  + V RG
Sbjct: 407 VMEAFNLQSQMVVRG 421



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 16/295 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  ++         + A  +L  M   GI      ++ L+    + G +  A   L
Sbjct: 669 DCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESAL 728

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M      P  +     +       K  K L+  E++  +G+  ++  YN LI  +C L
Sbjct: 729 DEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRL 788

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND--------- 310
              + A  ++DEM  +G S D V+Y  ++   C    +++      +M  D         
Sbjct: 789 GMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTY 848

Query: 311 -------SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                  SN    +  +EE ++LV++M++ G +P+  TY  +V+G+ RVG   +   +  
Sbjct: 849 NTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHI 908

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
           +M   G  P   +Y   ++    +GK +EARE++N    +   PN+ TY ++  G
Sbjct: 909 EMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 963


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 204/387 (52%), Gaps = 12/387 (3%)

Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           +G      ++  L+    + G+ R A+ VL  +    V PN+++ NT I  L     +  
Sbjct: 163 KGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIH 222

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A      M +  I P+V+TY  LI G   + R+K+A+ L ++M LK   PD  ++  ++ 
Sbjct: 223 ASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVD 282

Query: 290 YLCKEKRIKEVRDLMEKMVN---DSNLFHDQGRIE---------EAKELVNQMSQMGCIP 337
            LCKE  +K+ R+++  M+    DSN+      ++         +A  + N M++ G  P
Sbjct: 283 GLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTP 342

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           DV +Y+ ++NG C+   +D+A  + ++M+     PNTV+Y + ++GL   G+  +A +++
Sbjct: 343 DVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLV 402

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           N         + ITYS ++  L +  ++ +A  ++ ++  +G  P      +L+  LC+ 
Sbjct: 403 NEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKN 462

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G++  A+   Q+ L KG  ++V  +  ++ G C++G  +EALSL+  M      PD VTY
Sbjct: 463 GRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTY 522

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKG 544
            T++ AL +N + ++A +L+ +M+ +G
Sbjct: 523 ETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 210/418 (50%), Gaps = 16/418 (3%)

Query: 173 ECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           + +P+ F++  L+  +   G L  A  VL+ + K    P+ +   T I  L +  K+ +A
Sbjct: 94  QIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREA 153

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           L F + +   G   + ++Y  LI G C     + A++++ ++      P+ V Y T++  
Sbjct: 154 LHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDS 213

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQ-------------GRIEEAKELVNQMSQMGCIP 337
           LCK+K +    DL  +M+    +F D              GR++EA  L NQM      P
Sbjct: 214 LCKDKLVIHASDLCSEMI-VKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKP 272

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           DV T+  +V+G C+ GE+ +A+ +L  M   G   N V+Y + ++G     +  +A  + 
Sbjct: 273 DVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVF 332

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           NT      TP+  +YS++++GL +   + EA ++ +EM  K   P  V  N LI  L + 
Sbjct: 333 NTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKY 392

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G++  A   + E  N+G   +V+ ++SL+   C+   +++A++L+  +      P+  TY
Sbjct: 393 GRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTY 452

Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           T ++D L KNGR+++A  +   +L KG    V  Y  +++  C+ G  ++ L L+ KM
Sbjct: 453 TILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKM 510



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 185/373 (49%), Gaps = 17/373 (4%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            + R ALQ     D     + + ++Y  +++ L K KL   A  +   M  + I   P+ 
Sbjct: 183 GETRAALQVLRKID-GLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRI--FPDV 239

Query: 179 FSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
            +Y  + Y     G+L+ A+ + + M    + P++   N  +  L    ++ KA   L  
Sbjct: 240 VTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAV 299

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M   G+  N++TYN L+ GY  + +   A  + + M  +G +PD  SY  ++  LCK K 
Sbjct: 300 MIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKM 359

Query: 297 IKEVRDLMEKMVNDS--------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTA 344
           + E  +L ++M + S        N   D     GRI +A +LVN+M   G   DV+TY++
Sbjct: 360 VDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSS 419

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++  C+  ++D+A  ++ ++   G +PN  +YT  ++GLC NG+  +A+ +      + 
Sbjct: 420 LLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKG 479

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
           +  +   Y+V+++GL +EG   EA  +V +M   G  P  V    L+++L    K D A 
Sbjct: 480 YHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAV 539

Query: 465 KFMQECLNKGCAV 477
           K ++E + +G AV
Sbjct: 540 KLLREMIVQGSAV 552



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 180/372 (48%), Gaps = 5/372 (1%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
               A     QM      PD+ T+  ++N FC +G L+ A  +L +++  G  P+TV+ T
Sbjct: 79  HFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTIT 138

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             + GLC NGK  EA    +    + +  + ++Y  +++GL + G+   A  V+R++   
Sbjct: 139 TLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGL 198

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
              P  V  N +I SLC++  +  A     E + K    +VV +T+LI G    G L+EA
Sbjct: 199 LVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEA 258

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
           + L + M L    PD  T+  ++D L K G +++A  ++  M+ +G+   +VTY +++  
Sbjct: 259 VGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDG 318

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
           Y  V + E+    +   ++++       +Y+ +I  LC    ++EA  +  ++   +   
Sbjct: 319 YFLV-KQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAP 377

Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
           +  T + L++  L  G    A+ +   M NR    D+     + + L    + ++A TL+
Sbjct: 378 NTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLI 437

Query: 676 LRFVERGHIQPK 687
            +  ++G IQP 
Sbjct: 438 TKIKDQG-IQPN 448



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 2/239 (0%)

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
           E N ++ SL +      A  F ++   K    ++  F  LI  FC  G L  A S+L  +
Sbjct: 66  EFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKI 125

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
           +     PDTVT TT+I  L  NG+V EA      +++KG     V+Y T+I+  C+ G  
Sbjct: 126 FKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGET 185

Query: 566 EDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
              L++L K+  L  Q     YN +I++LC    +  A  +  +++      D  T   L
Sbjct: 186 RAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTL 245

Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           +   L  G    A  +  +M  +N+ PD+     + + L  EG+ ++A  ++   +++G
Sbjct: 246 IYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQG 304


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 221/471 (46%), Gaps = 51/471 (10%)

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           +L+  +   V   L +CN  +  LV  N++  A    + M+ +G +PNV +Y+ L+  Y 
Sbjct: 161 LLTYTEAKKVGVELQLCNFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYT 220

Query: 258 DLHRI--KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL-- 313
              R+   +A +L+ EM +KG  P+  +Y T +  L + +++    + ++ +    N   
Sbjct: 221 HGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCN 280

Query: 314 ----------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
                     F  +G+++EA E+ + M + G +PD  +Y+ +V+G C+ G++     +L 
Sbjct: 281 TYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLV 340

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M  +G  P  VSY++ L+GLC  GK   A E+    EE+ +  + I YS++++G  +  
Sbjct: 341 EMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHL 400

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
            +   CD+  +MV   F P       LI + CR   +  A    +  L+ G + NVV  T
Sbjct: 401 NIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCT 460

Query: 484 SLIRGFCQKGDLEEALSLLDD-----------MY------LCKKD--------------- 511
            L+ GF ++  ++EA   L             MY      LCK +               
Sbjct: 461 ILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKR 520

Query: 512 ---PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              PDTV Y+ IID+  K  ++ EA  L  KML +G  P V TY ++I+  C   R+ ++
Sbjct: 521 GYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEV 580

Query: 569 LKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
           + L + M+ +     R  Y  +I   C    ++ A +I   + +    ADA
Sbjct: 581 VTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADA 631



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 202/438 (46%), Gaps = 12/438 (2%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + +   Y   L  LS+T+    A   L+++ +RG  C    F+ ++  + R G+++ A+ 
Sbjct: 243 KPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIE 302

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   M+K  + P+    +  +  L     +      L  M   GI P +++Y+ L+ G C
Sbjct: 303 VFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLC 362

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV--------- 308
              +++ A +L   +  +G   D + Y  ++   C+   I+ V DL   MV         
Sbjct: 363 RAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAY 422

Query: 309 NDSNLFHDQGR---IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
           N ++L +   R   + +A  +   M   G  P+VVT T +V+GF +   +D+A   L ++
Sbjct: 423 NYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKV 482

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
              G  PN   Y   +NGLC   KS     +     +  + P+ + YS+++    +  KL
Sbjct: 483 RQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKL 542

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            EA  +  +M+ +G  P       LI  LC + ++       +  + +G   + + +TSL
Sbjct: 543 PEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSL 602

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I  +C++ +++ AL +   M       D   YT +I   SK   ++ A  LM +M +KGL
Sbjct: 603 IVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGL 662

Query: 546 VPTVVTYRTVIHRYCQVG 563
            P+VVTY  +I  Y ++G
Sbjct: 663 TPSVVTYTNLIIGYFKIG 680



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 199/473 (42%), Gaps = 16/473 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +L  M  +G++     +   +   SR  ++ +A   L M+ +     N    N  I 
Sbjct: 230 AFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQ 289

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                 ++ +A+   + M+  G+ P+  +Y+ L+ G C    +     L+ EM   G +P
Sbjct: 290 GFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAP 349

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG-------------RIEEAKEL 326
             VSY +++  LC+  +++   +L  ++  +    HD                IE   +L
Sbjct: 350 TLVSYSSLLHGLCRAGKVELAFELFRRL-EEQGFKHDHIVYSIILNGCCQHLNIEVVCDL 408

Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
            N M     +PD   YT+++  FCR   L  A  + + M   G  PN V+ T  ++G   
Sbjct: 409 WNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGK 468

Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
                EA   ++   +    PN   Y V+++GL +  K      +  +M+K+G+ P  V 
Sbjct: 469 ERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVV 528

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
            +++I S  +  K+  A +   + L++G   NV  +TSLI G C    L E ++L   M 
Sbjct: 529 YSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMI 588

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
                PD + YT++I    K   ++ A E+   M   GL      Y  +I  + +V  ++
Sbjct: 589 WEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMD 648

Query: 567 DLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
               L+E+M +K        Y  +I      G   +A      +L+     DA
Sbjct: 649 GAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDA 701



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 23/226 (10%)

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           + + M K    P+ ++ +  I   V   KL +A R   +M   G  PNV TY  LI G C
Sbjct: 513 IFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLC 572

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
              R+ + + L   M  +G +PD++ Y +++   CK   +K                   
Sbjct: 573 HDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMK------------------- 613

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
                A E+   M ++G   D   YT ++ GF +V  +D A+ ++++M + G  P+ V+Y
Sbjct: 614 ----AALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTY 669

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           T  + G    G   +A    N+  +   TP+A    ++  G   +G
Sbjct: 670 TNLIIGYFKIGDERKANMTYNSMLQAGITPDAKLSCILGFGNDADG 715



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 23/242 (9%)

Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
           RQ+    +  +Y +++  L K         +   M +RG       +S ++ ++ +A KL
Sbjct: 483 RQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKL 542

Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
             A  +   M      PN+    + I+ L   ++L + +   + M   G+TP+ + Y  L
Sbjct: 543 PEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSL 602

Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
           I  YC    +K A+++   M   G S D   Y  ++G   K   +   + LME+M N   
Sbjct: 603 IVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNK-- 660

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
                                G  P VVTYT ++ G+ ++G+  +A      M   G  P
Sbjct: 661 ---------------------GLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITP 699

Query: 373 NT 374
           + 
Sbjct: 700 DA 701



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 6/213 (2%)

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV--E 531
           G  + + NF  L++   ++  +  A SL DDM      P+  +Y+ ++ A +   R+   
Sbjct: 171 GVELQLCNF--LLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLA 228

Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-QKCRT-AYNQVI 589
           EA EL+ +M  KG+ P   TY T ++   +  +V      L+ +  +   C T  +N VI
Sbjct: 229 EAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVI 288

Query: 590 ENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLI 649
           +  C  G ++EA ++   + +     D  +  +LV+    +G  L  Y +   M    + 
Sbjct: 289 QGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIA 348

Query: 650 PDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
           P L     +   L   GK E A  L  R  E+G
Sbjct: 349 PTLVSYSSLLHGLCRAGKVELAFELFRRLEEQG 381


>gi|255584082|ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527472|gb|EEF29603.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 487

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 207/439 (47%), Gaps = 25/439 (5%)

Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
           +A +L  A  V+    +  V P+++  NT I           A   L RM+ A I+P+V+
Sbjct: 49  KAKELNKAESVIIDGIRLGVLPDVVTYNTLIDAYSRFVSFNAAYSLLNRMREASISPDVV 108

Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
           TYN LI G      + +++ L DEM   G  PD  SY T+M                   
Sbjct: 109 TYNSLIAGAARNCLLLESLNLFDEMLNMGIVPDVWSYNTLM------------------- 149

Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               + F   G+ EEA E++ Q+   G  P   T+  ++NG C+ G    A  + + +  
Sbjct: 150 ----HCFFKLGKAEEANEVLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNALMLFRSLKQ 205

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
           HG  P  ++Y   +NGLC + +   AR M+   E   + PNAITY+ VM    R  +  +
Sbjct: 206 HGFVPQLITYNILINGLCKDRRLRAARSMLKELETSGYVPNAITYTTVMKFCFRSRRFKQ 265

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
             ++++EM+ KG+         ++  L + G+++ A ++M++ +  G   ++ ++ +LI 
Sbjct: 266 GLEILQEMIDKGYTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDLASYNTLIN 325

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
            +C++G+LE A  LLD++       D  T+T +I+ + K G +  A   M  M   G   
Sbjct: 326 LYCKQGNLEAAYQLLDEIEKEGLQCDEYTHTILINWMCKAGNILGARRHMQHMNMMGFDS 385

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGK 607
            +V    ++   C+ G+++  +KL E M  K +    Y+ ++ NLC  G    A K+L  
Sbjct: 386 CLVALNCMVDGLCKNGQIDHAVKLFESM--KMRDSFTYSSLVHNLCKNGRFHRASKLLLS 443

Query: 608 VLRTASKADASTCHVLVES 626
            LR+  K   S   V++  
Sbjct: 444 CLRSGMKILPSAQRVVISG 462



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 203/439 (46%), Gaps = 35/439 (7%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P+  +Y  L+ AYSR      A  +L+ M++A+++P+++  N+ I        L ++L  
Sbjct: 70  PDVVTYNTLIDAYSRFVSFNAAYSLLNRMREASISPDVVTYNSLIAGAARNCLLLESLNL 129

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
            + M   GI P+V +YN L+  +  L + ++A +++ ++   G SP   ++  ++  LCK
Sbjct: 130 FDEMLNMGIVPDVWSYNTLMHCFFKLGKAEEANEVLRQIFGHGLSPCPTTFNIMINGLCK 189

Query: 294 EKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
                                   G    A  L   + Q G +P ++TY  ++NG C+  
Sbjct: 190 -----------------------NGFTSNALMLFRSLKQHGFVPQLITYNILINGLCKDR 226

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            L  A+ ML+++   G  PN ++YT  +     + +  +  E++    ++ +T +   Y 
Sbjct: 227 RLRAARSMLKELETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDKGYTFDGFAYC 286

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            V+  L + G+L EA + +R+M+K G        N LI   C++G ++ A + + E   +
Sbjct: 287 TVVGVLIKTGRLEEATEYMRQMIKNGIEHDLASYNTLINLYCKQGNLEAAYQLLDEIEKE 346

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
           G   +    T LI   C+ G++  A   +  M +   D   V    ++D L KNG+++ A
Sbjct: 347 GLQCDEYTHTILINWMCKAGNILGARRHMQHMNMMGFDSCLVALNCMVDGLCKNGQIDHA 406

Query: 534 TELM--MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVI 589
            +L   MKM          TY +++H  C+ GR     KLL   L    +   +A   VI
Sbjct: 407 VKLFESMKMRDS------FTYSSLVHNLCKNGRFHRASKLLLSCLRSGMKILPSAQRVVI 460

Query: 590 ENLCSFGYLEEAGKILGKV 608
             L   G+ +EA K+  K+
Sbjct: 461 SGLRYSGFQKEARKLKSKI 479



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/417 (22%), Positives = 181/417 (43%), Gaps = 27/417 (6%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y  +++  S+      A  +L  M    I      ++ L+   +R   L  ++ + 
Sbjct: 71  DVVTYNTLIDAYSRFVSFNAAYSLLNRMREASISPDVVTYNSLIAGAARNCLLLESLNLF 130

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    + P++   NT +H      K  +A   L ++   G++P   T+N +I G C  
Sbjct: 131 DEMLNMGIVPDVWSYNTLMHCFFKLGKAEEANEVLRQIFGHGLSPCPTTFNIMINGLCKN 190

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
               +A+ L   +   G  P  ++Y  ++  LCK++R++  R +++              
Sbjct: 191 GFTSNALMLFRSLKQHGFVPQLITYNILINGLCKDRRLRAARSMLK-------------- 236

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
                    ++   G +P+ +TYT V+    R     Q  ++LQ+M   G   +  +Y  
Sbjct: 237 ---------ELETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDKGYTFDGFAYCT 287

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
            +  L   G+  EA E +    +     +  +Y+ +++   ++G L  A  ++ E+ K+G
Sbjct: 288 VVGVLIKTGRLEEATEYMRQMIKNGIEHDLASYNTLINLYCKQGNLEAAYQLLDEIEKEG 347

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
                    +LI  +C+ G + GA++ MQ     G    +V    ++ G C+ G ++ A+
Sbjct: 348 LQCDEYTHTILINWMCKAGNILGARRHMQHMNMMGFDSCLVALNCMVDGLCKNGQIDHAV 407

Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
            L + M    K  D+ TY++++  L KNGR   A++L++  L  G+       R VI
Sbjct: 408 KLFESM----KMRDSFTYSSLVHNLCKNGRFHRASKLLLSCLRSGMKILPSAQRVVI 460



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 156/339 (46%), Gaps = 16/339 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++    K    + A  VLR +   G+   P  F+ ++    + G   NA+ + 
Sbjct: 141 DVWSYNTLMHCFFKLGKAEEANEVLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNALMLF 200

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +++    P L+  N  I+ L    +L  A   L+ ++ +G  PN +TY  ++K     
Sbjct: 201 RSLKQHGFVPQLITYNILINGLCKDRRLRAARSMLKELETSGYVPNAITYTTVMKFCFRS 260

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            R K  ++++ EM  KG + D  +Y TV+G L K  R++E  + M +M+ +         
Sbjct: 261 RRFKQGLEILQEMIDKGYTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDLASY 320

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               NL+  QG +E A +L++++ + G   D  T+T ++N  C+ G +  A++ +Q M  
Sbjct: 321 NTLINLYCKQGNLEAAYQLLDEIEKEGLQCDEYTHTILINWMCKAGNILGARRHMQHMNM 380

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G     V+    ++GLC NG+   A ++     E     ++ TYS ++H L + G+   
Sbjct: 381 MGFDSCLVALNCMVDGLCKNGQIDHAVKLF----ESMKMRDSFTYSSLVHNLCKNGRFHR 436

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           A  ++   ++ G    P    ++I  L   G    A+K 
Sbjct: 437 ASKLLLSCLRSGMKILPSAQRVVISGLRYSGFQKEARKL 475



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 14/199 (7%)

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
           W  NA + + ++H          AC   R MV++    T + +N+ I SLC+  +++ A+
Sbjct: 10  WRRNAESVASLLH--------HTACTCCR-MVRR--LSTRL-LNISIASLCKAKELNKAE 57

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
             + + +  G   +VV + +LI  + +      A SLL+ M      PD VTY ++I   
Sbjct: 58  SVIIDGIRLGVLPDVVTYNTLIDAYSRFVSFNAAYSLLNRMREASISPDVVTYNSLIAGA 117

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCR 582
           ++N  + E+  L  +ML+ G+VP V +Y T++H + ++G+ E+  ++L ++       C 
Sbjct: 118 ARNCLLLESLNLFDEMLNMGIVPDVWSYNTLMHCFFKLGKAEEANEVLRQIFGHGLSPCP 177

Query: 583 TAYNQVIENLCSFGYLEEA 601
           T +N +I  LC  G+   A
Sbjct: 178 TTFNIMINGLCKNGFTSNA 196



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 16/174 (9%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y  D   Y  ++ +L KT   + A   +R M + GIE    +++ L+  Y + G L  A 
Sbjct: 278 YTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDLASYNTLINLYCKQGNLEAAY 337

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVV------GNKLAKALRFLERMQLAGITPNVLTYN 250
            +L  ++K       L C+   H +++      GN L  A R ++ M + G    ++  N
Sbjct: 338 QLLDEIEKEG-----LQCDEYTHTILINWMCKAGNILG-ARRHMQHMNMMGFDSCLVALN 391

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
           C++ G C   +I  A+KL + M ++    D  +Y +++  LCK  R      L+
Sbjct: 392 CMVDGLCKNGQIDHAVKLFESMKMR----DSFTYSSLVHNLCKNGRFHRASKLL 441


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 187/360 (51%), Gaps = 14/360 (3%)

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           ++TYN LI  YC    +++A ++++ M  KG  P   +Y  ++  LCK+ R    + ++ 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 306 KMVN-----DSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
           +M+N     D+  ++        +    EAKE+  +M + G +PD+V++++++  F R  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
            LDQA    + M   G  P+ V YT  ++G C NG  LEA ++ +   E+    + I Y+
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
            +++GL +E  L++A  +  EMV++G  P       LI   C++G M  A         +
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
               ++V + +LI GFC+ G++E+A  L D M   K  P+ +TY  +I+A    G V EA
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIEN 591
             L   M+ KG+ PT+VT  TVI  YC+ G      + L +M++K       +YN +I +
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIND 360



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 170/337 (50%), Gaps = 2/337 (0%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           +G +EEA E++N M+  G  P + TY A++NG C+ G   +AK +L +M + G  P+T +
Sbjct: 14  EGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTT 73

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   L   C      EA+E+      +   P+ +++S +M    R   L +A    R+M 
Sbjct: 74  YNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMK 133

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           K G  P  V   +L+   CR G M  A K   E L +GC ++V+ + +++ G C++  L 
Sbjct: 134 KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLT 193

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           +A  L D+M      PD  T+TT+I    ++G + +A  L   M  + + P +V Y T+I
Sbjct: 194 DADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLI 253

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK 614
             +C+VG +E   +L + M+S++       Y  +I   CS G++ EA ++   ++    K
Sbjct: 254 DGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIK 313

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
               TC+ +++ Y   G    A +   RM  + + PD
Sbjct: 314 PTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPD 350



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 180/380 (47%), Gaps = 23/380 (6%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            ++ L+ AY R G L  A  +++ M    + P+L   N  I+ L    + A+A   L  M
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G++P+  TYN L+   C      +A ++  EM  +G  PD VS+ ++M    + +  
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR-- 120

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                                 +++A      M + G +PD V YT +++G+CR G + +
Sbjct: 121 ---------------------HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLE 159

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A K+  +M   GC  + ++Y   LNGLC      +A ++ +   E    P+  T++ ++H
Sbjct: 160 ALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIH 219

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  ++G +++A  +   M ++   P  V  N LI   C+ G+M+ A +     +++    
Sbjct: 220 GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFP 279

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           N + +  LI  +C  G + EA  L D M      P  VT  T+I    ++G   +A E +
Sbjct: 280 NHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFL 339

Query: 538 MKMLSKGLVPTVVTYRTVIH 557
            +M++KG+ P  ++Y T+I+
Sbjct: 340 GRMIAKGVAPDHISYNTLIN 359



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 175/350 (50%), Gaps = 10/350 (2%)

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR---- 394
           +VTY  ++  +CR G L++A +++  M   G KP+  +Y A +NGLC  G+   A+    
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           EM+N       +P+  TY+ ++    R    SEA ++  EM+++G  P  V  + L+   
Sbjct: 61  EMLNIG----LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVF 116

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
            R   +D A  + ++    G   + V +T L+ G+C+ G++ EAL + D+M       D 
Sbjct: 117 SRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDV 176

Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           + Y TI++ L K   + +A +L  +M+ +G +P   T+ T+IH +CQ G +   L L   
Sbjct: 177 IAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGT 236

Query: 575 MLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
           M  +  +    AYN +I+  C  G +E+A ++   ++      +  T  +L+ +Y + G 
Sbjct: 237 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 296

Query: 633 PLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
              A+++   M  + + P L  C  V +     G S +AD  + R + +G
Sbjct: 297 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 346



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 158/327 (48%), Gaps = 23/327 (7%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           AK +L  M   G+      ++ L+V   R      A  +   M +  V P+L+  ++ + 
Sbjct: 55  AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMA 114

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
           V      L +AL +   M+  G+ P+ + Y  L+ GYC    + +A+K+ DEM  +GC  
Sbjct: 115 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 174

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
           D ++Y T++  LCKEK +                        +A +L ++M + G +PD 
Sbjct: 175 DVIAYNTILNGLCKEKMLT-----------------------DADKLFDEMVERGALPDF 211

Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
            T+T +++G C+ G + +A  +   M     KP+ V+Y   ++G C  G+  +A E+ + 
Sbjct: 212 YTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDG 271

Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
                  PN ITY ++++     G +SEA  +   M++KG  PT V  N +I+  CR G 
Sbjct: 272 MISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGD 331

Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLI 486
              A +F+   + KG A + +++ +LI
Sbjct: 332 SSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 12/274 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           AK +   M R+G+     +FS LM  +SR   L  A+     M+K  + P+ +I    +H
Sbjct: 90  AKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMH 149

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
                  + +AL+  + M   G   +V+ YN ++ G C    + DA KL DEM  +G  P
Sbjct: 150 GYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALP 209

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
           D  ++ T++   C++  + +   L   M   +            + F   G +E+A EL 
Sbjct: 210 DFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELW 269

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           + M      P+ +TY  ++N +C VG + +A ++   M   G KP  V+    + G C +
Sbjct: 270 DGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRS 329

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
           G S +A E +     +   P+ I+Y+ +++  +R
Sbjct: 330 GDSSKADEFLGRMIAKGVAPDHISYNTLINDGKR 363



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 23/208 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  +L  L K K+   A ++   M  RG       F+ L+  + + G +  A+ + 
Sbjct: 175 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 234

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  + P+++  NT I       ++ KA    + M    I PN +TY  LI  YC +
Sbjct: 235 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 294

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             + +A +L D M  KG  P  V+  TV+   C+                        G 
Sbjct: 295 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCR-----------------------SGD 331

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVN 347
             +A E + +M   G  PD ++Y  ++N
Sbjct: 332 SSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 52/121 (42%)

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
           Q   + D + Y  +++   K    + A  +   M  R I      +  L+ AY   G + 
Sbjct: 239 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVS 298

Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
            A  +  +M +  + P L+ CNT I         +KA  FL RM   G+ P+ ++YN LI
Sbjct: 299 EAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358

Query: 254 K 254
            
Sbjct: 359 N 359


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 239/523 (45%), Gaps = 43/523 (8%)

Query: 85  IELRSAW-SPKLE-------GELRNLLRSLKPRQICAVLRSQA---DERVALQFFYWADR 133
           + +R ++  P LE         +RN+L SL  R +  ++         R    FF +   
Sbjct: 51  VAIRDSYKDPPLEFSSFAACSSIRNVLPSLSVRHVVDLINRNPLSLPHRSIFAFFKFISS 110

Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLM-ARRGIECRPEAF------------- 179
           Q  +R     Y++M   L+  ++   A+ ++ L+ +R+G       F             
Sbjct: 111 QPEFRFTVETYFVMARFLAIHEMFVEAQSLIELVVSRKGKNSASSVFISLVEMRGTPMCD 170

Query: 180 ---SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
                LM+ Y   G + + +    + +K      +  C   +  ++  N       F   
Sbjct: 171 FLVDALMITYMDLGFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYME 230

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           +  AG   NV  +N L+  +C    I DA K+ DE+  +   P  VS+ T++   CK   
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGN 290

Query: 297 IK---EVRDLMEKMVNDSNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
           +     ++  MEK     ++F           + +++ A  L  +M + G IP+ V +T 
Sbjct: 291 LDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTT 350

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++G  R G++D  K+  Q+M   G +P+ V Y   +NG C NG  + AR +++      
Sbjct: 351 LIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P+ +TY+ ++ G  R G +  A ++ +EM + G     V  + LI  +C+EG++  A+
Sbjct: 411 LRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAE 470

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
           + ++E L  G   + V +T ++  FC+KGD +    LL +M      P+ VTY  +++ L
Sbjct: 471 RALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGL 530

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVI---HRYCQVGR 564
            K G+++ A  L+  ML+ G+VP  +TY T++   HR+    +
Sbjct: 531 CKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASK 573



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 183/387 (47%), Gaps = 26/387 (6%)

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           G       F+ LM  + + G + +A  V   + K ++ P ++  NT I+       L   
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVG 294

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
            R    M+ +   P+V TY+ LI   C  +++  A +L  EM  +G  P+ V + T++  
Sbjct: 295 FRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHG 354

Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
             +                        G+I+  KE   +M   G  PD+V Y  +VNGFC
Sbjct: 355 HSR-----------------------NGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC 391

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           + G+L  A+ ++  M   G +P+ V+YT  ++G C  G    A E+    ++     + +
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRV 451

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
            +S ++ G+ +EG++ +A   +REM++ G  P  V   +++ + C++G      K ++E 
Sbjct: 452 GFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
            + G   NVV +  L+ G C+ G ++ A  LLD M      PD +TY T+++    + R 
Sbjct: 512 QSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEG---HHRH 568

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIH 557
             A++   +    G+V  + +Y+++++
Sbjct: 569 ANASKHYKQKPEIGIVADLASYKSLVN 595



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 150/327 (45%), Gaps = 37/327 (11%)

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
           +V  +  ++N FC+ G +  A+K+  ++     +P  VS+   +NG C  G       + 
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLK 298

Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
           +  E+    P+  TYS +++ L +E K+  A  +  EM ++G  P  V    LI    R 
Sbjct: 299 HHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRN 358

Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
           G++D  K+  Q+ L+KG   ++V + +L+ GFC+ GDL  A +++D M      PD VTY
Sbjct: 359 GQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTY 418

Query: 518 TTIIDALSKNGRVEEATEL-----------------------------------MMKMLS 542
           TT+ID   + G V+ A E+                                   + +ML 
Sbjct: 419 TTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLR 478

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEE 600
            G+ P  VTY  ++  +C+ G  +   KLL++M S         YN ++  LC  G ++ 
Sbjct: 479 AGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKN 538

Query: 601 AGKILGKVLRTASKADASTCHVLVESY 627
           A  +L  +L      D  T + L+E +
Sbjct: 539 ADMLLDAMLNVGVVPDDITYNTLLEGH 565



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 2/200 (1%)

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           E++  GF       N+L+   C+EG +  A+K   E   +     VV+F +LI G+C+ G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVG 289

Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
           +L+    L   M   +  PD  TY+ +I+AL K  +++ A  L  +M  +GL+P  V + 
Sbjct: 290 NLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFT 349

Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRT 611
           T+IH + + G+++ + +  +KMLSK  Q     YN ++   C  G L  A  I+  ++R 
Sbjct: 350 TLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409

Query: 612 ASKADASTCHVLVESYLNKG 631
             + D  T   L++ +   G
Sbjct: 410 GLRPDKVTYTTLIDGFCRGG 429


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 203/391 (51%), Gaps = 14/391 (3%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           FS L++A ++  K    + +   ++   ++ +L    T I       +L+ AL  L +M 
Sbjct: 82  FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G  P+++T+  L+ G+C ++R  +A+ L+D++   G  P+ V Y T++  LC++ ++ 
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201

Query: 299 EVRDLMEKM-----------VND--SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
              D+++ M            N   + LFH  G    +  +++ M +MG  PDV+T++A+
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFH-SGTWGVSARILSDMMRMGISPDVITFSAL 260

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           ++ + + G+L +AKK   +M      PN V+Y + +NGLC +G   EA++++N    + +
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            PNA+TY+ +++G  +  ++ +   ++  M + G        N L Q  C+ GK   A+K
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK 380

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            +   ++ G   ++  F  L+ G C  G + +AL  L+D+   K     +TY  II  L 
Sbjct: 381 VLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLC 440

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           K  +VE+A  L   +  KG+ P V+TY T++
Sbjct: 441 KADKVEDAWYLFCSLALKGVSPDVITYITMM 471



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 198/416 (47%), Gaps = 17/416 (4%)

Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
           +L  ++K    +    + R +   GI     +F+ L+  + R  +L  A+  L  M K  
Sbjct: 85  LLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLG 144

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
             P+++   + ++     N+  +A+  ++++   G  PNV+ YN +I   C+  ++  A+
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204

Query: 267 KLIDEMPLKGCSPDKVSYYTVM------GYLCKEKRIKEVRDLMEKMVNDS--------N 312
            ++  M   G  PD V+Y +++      G      RI  + D+M   ++          +
Sbjct: 205 DVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI--LSDMMRMGISPDVITFSALID 262

Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
           ++  +G++ EAK+  N+M Q    P++VTY +++NG C  G LD+AKK+L  +   G  P
Sbjct: 263 VYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFP 322

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           N V+Y   +NG C   +  +  +++     +    +  TY+ +  G  + GK S A  V+
Sbjct: 323 NAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVL 382

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             MV  G  P     N+L+  LC  GK+  A   +++       V ++ +  +I+G C+ 
Sbjct: 383 GRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKA 442

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK-GLVP 547
             +E+A  L   + L    PD +TY T++  L +     EA EL  KM  + GL+P
Sbjct: 443 DKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 165/316 (52%), Gaps = 4/316 (1%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           + E    L   +  +G   D+ ++T +++ FCR   L  A   L +M   G +P+ V++ 
Sbjct: 94  KYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFG 153

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
           + +NG CH  +  EA  +++      + PN + Y+ ++  L  +G+++ A DV++ M K 
Sbjct: 154 SLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKM 213

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G  P  V  N LI  L   G    + + + + +  G + +V+ F++LI  + ++G L EA
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
               ++M     +P+ VTY ++I+ L  +G ++EA +++  ++SKG  P  VTY T+I+ 
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333

Query: 559 YCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
           YC+  RV+D +K+L  M S+         YN + +  C  G    A K+LG+++      
Sbjct: 334 YCKAKRVDDGMKILCVM-SRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHP 392

Query: 616 DASTCHVLVESYLNKG 631
           D  T ++L++   + G
Sbjct: 393 DMYTFNILLDGLCDHG 408



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 200/416 (48%), Gaps = 31/416 (7%)

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
           K  +A+ +   M ++   P+++  +  +  +   NK    +     +++ GI+ ++ ++ 
Sbjct: 59  KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118

Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
            LI  +C   R+  A+  + +M   G  P  V++ +++   C               VN 
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCH--------------VN- 163

Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
                   R  EA  LV+Q+  +G  P+VV Y  +++  C  G+++ A  +L+ M   G 
Sbjct: 164 --------RFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI 215

Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
           +P+ V+Y + +  L H+G    +  +++       +P+ IT+S ++    +EG+L EA  
Sbjct: 216 RPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKK 275

Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
              EM+++   P  V  N LI  LC  G +D AKK +   ++KG   N V + +LI G+C
Sbjct: 276 QYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYC 335

Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
           +   +++ + +L  M     D DT TY T+     + G+   A +++ +M+S G+ P + 
Sbjct: 336 KAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMY 395

Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT-----AYNQVIENLCSFGYLEEA 601
           T+  ++   C  G++   L  LE +   QK +T      YN +I+ LC    +E+A
Sbjct: 396 TFNILLDGLCDHGKIGKALVRLEDL---QKSKTVVGIITYNIIIKGLCKADKVEDA 448



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 164/355 (46%), Gaps = 2/355 (0%)

Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
           +  +A  L   M++   +P +V ++ ++    ++ + +    + + +   G   +  S+T
Sbjct: 59  KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118

Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
             ++  C   +   A   +    +  + P+ +T+  +++G     +  EA  +V ++V  
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178

Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
           G+ P  V  N +I SLC +G+++ A   ++     G   +VV + SLI      G    +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238

Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             +L DM      PD +T++ +ID   K G++ EA +   +M+ + + P +VTY ++I+ 
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
            C  G +++  K+L  ++SK     A  YN +I   C    +++  KIL  + R     D
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358

Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
             T + L + Y   G    A KV  RM +  + PD+     + + L   GK  +A
Sbjct: 359 TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 156/321 (48%), Gaps = 17/321 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
           Y  + ++Y  +++ L +      A  VL+ M + GI  RP+  +Y  L+     +G    
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI--RPDVVTYNSLITRLFHSGTWGV 237

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           +  +LS M +  ++P+++  +  I V     +L +A +    M    + PN++TYN LI 
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---- 310
           G C    + +A K+++ +  KG  P+ V+Y T++   CK KR+ +   ++  M  D    
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357

Query: 311 -----SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                + L+      G+   A++++ +M   G  PD+ T+  +++G C  G++ +A   L
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRL 417

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           + +         ++Y   + GLC   K  +A  +  +   +  +P+ ITY  +M GLRR+
Sbjct: 418 EDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477

Query: 423 GKLSEACDVVREMVKK-GFFP 442
               EA ++ R+M K+ G  P
Sbjct: 478 RLWREAHELYRKMQKEDGLMP 498



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 130/338 (38%), Gaps = 38/338 (11%)

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
           H+ K  +A  +     E    P+ + +S ++  + +  K      + R +   G      
Sbjct: 56  HSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLY 115

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
               LI   CR  ++  A   + + +  G   ++V F SL+ GFC      EA+SL+D +
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
                +P+ V Y TIID+L + G+V  A +++  M   G+ P VVTY ++I R    G  
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235

Query: 566 EDLLKLLEKML-------------------------------------SKQKCRTAYNQV 588
               ++L  M+                                     S       YN +
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295

Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
           I  LC  G L+EA K+L  ++      +A T + L+  Y          K+ C M    +
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355

Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
             D      + +     GK   A+ ++ R V  G + P
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG-VHP 392


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 207/426 (48%), Gaps = 28/426 (6%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           A   L++A S+ G L  A+YV   ++     P L  CN  +  LV   +   A    + M
Sbjct: 121 ALGVLVIALSQMGLLDEALYVFRRLR---TLPALPACNAVLDGLVKARRPGCAWELFDEM 177

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
              G+ P+V+TYN LI        +  A ++ D+M  +   P+ V+Y T++  LC+E   
Sbjct: 178 LRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEE--- 234

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                               G I +A+ L + M + G  P+  TY  +++G C+  +++ 
Sbjct: 235 --------------------GCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNS 274

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  + Q++   G  PN V +T  ++G C   +  EA+ M          P    Y+ +M 
Sbjct: 275 AVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMD 334

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           G  R G   EA  + +EM + G  P     +++++ LC  G+M  A +F+Q     G  +
Sbjct: 335 GAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNL 394

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           N   + +LI  +C+ G+LEEAL+    M     +P+ V+Y+++ID  SK G+++ A  + 
Sbjct: 395 NAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIY 454

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSF 595
            +M++KG+ P VVTY  +IH + + G ++   +L ++M+       A   + +++ LC  
Sbjct: 455 TEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRE 514

Query: 596 GYLEEA 601
             ++EA
Sbjct: 515 NRVQEA 520



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 196/439 (44%), Gaps = 29/439 (6%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M RRG+      ++ L+ A    G +  A  V   M    + PN++   T I  L     
Sbjct: 177 MLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGC 236

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +  A R  + M+ AG+ PN  TYN L+ G+C    +  A+ L  E+   G +P+ V + T
Sbjct: 237 IGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTT 296

Query: 287 VMGYLCKEKRIKEVRDLMEKM--------VNDSNLFHD----QGRIEEAKELVNQMSQMG 334
           ++   CK KR  E + +  +M        V   N   D     G  +EA  L  +M+++G
Sbjct: 297 LIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLG 356

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
             PD  T + VV G C  G++  A + LQ +   G   N  +Y A ++  C  G   EA 
Sbjct: 357 LCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEAL 416

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
                  E    PN ++YS ++ G  + GK+  A  +  EMV KG  P  V    LI   
Sbjct: 417 ATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGH 476

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL--------DDMY 506
            + G +D A +  +E +  G + N +  + L+ G C++  ++EA+  +         D++
Sbjct: 477 AKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIH 536

Query: 507 LCKKD---------PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
               +         P++V Y T+I  L  +G+  EA +L   M   G++P   TY  +I 
Sbjct: 537 SVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIR 596

Query: 558 RYCQVGRVEDLLKLLEKML 576
             C +G V + + L   M+
Sbjct: 597 GQCMLGYVLNAMMLYADMM 615



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 150/336 (44%), Gaps = 40/336 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + +++  +++   K K    AK +   M R G+      ++ LM    R+G  + A+ + 
Sbjct: 290 NAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALY 349

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M +  + P+   C+  +  L  G ++  A RFL+ +Q  G+  N   YN LI  YC +
Sbjct: 350 QEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRI 409

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
             +++A+     M   G  P+ VSY +++    K                       +G+
Sbjct: 410 GNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSK-----------------------RGK 446

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
           ++ A  +  +M   G  P+VVTYTA+++G  + G +D A ++ ++M  +G  PN ++ + 
Sbjct: 447 MQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSV 506

Query: 380 FLNGLCHNGKSLEAREMIN-----------------TSEEEWWTPNAITYSVVMHGLRRE 422
            ++GLC   +  EA   +                  T EEE   PN++ Y  +++GL  +
Sbjct: 507 LVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLD 566

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
           G+  EA  +   M K G  P      LLI+  C  G
Sbjct: 567 GQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLG 602



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 157/378 (41%), Gaps = 16/378 (4%)

Query: 326 LVNQMSQMG-------------CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
           LV  +SQMG              +P +    AV++G  +      A ++  +M   G  P
Sbjct: 125 LVIALSQMGLLDEALYVFRRLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVP 184

Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
           + V+Y   +N     G   +A+E+ +    +   PN +TY+ ++  L  EG + +A  + 
Sbjct: 185 SVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLF 244

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
             M + G  P     N+L+   C+   ++ A    QE L  G   N V FT+LI GFC+ 
Sbjct: 245 DAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKA 304

Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
               EA  +  +M      P    Y +++D   ++G  +EA  L  +M   GL P   T 
Sbjct: 305 KRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTC 364

Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
             V+   C  G++    + L+ +          AYN +I+  C  G LEEA     ++  
Sbjct: 365 SIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTE 424

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
              + +  +   L++ +  +G   +A  +   M  + + P++     +       G  + 
Sbjct: 425 VGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDA 484

Query: 671 ADTLMLRFVERGHIQPKS 688
           A  L    +E G I P +
Sbjct: 485 AFRLHKEMIENG-ISPNA 501



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 112/248 (45%), Gaps = 21/248 (8%)

Query: 156 LCQG-----AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
           LC G     A R L+ +   G+     A++ L+  Y R G L  A+   + M +  + PN
Sbjct: 371 LCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPN 430

Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
           ++  ++ I       K+  A+     M   GI PNV+TY  LI G+     I  A +L  
Sbjct: 431 VVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHK 490

Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKE-VRDLME----KMVNDSNLFHDQGRIEEAKE 325
           EM   G SP+ ++   ++  LC+E R++E VR +ME    K  +  ++F +    EE   
Sbjct: 491 EMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEEC-- 548

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
                     IP+ V Y  ++ G    G+  +A K+   M   G  P++ +YT  + G C
Sbjct: 549 ---------LIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQC 599

Query: 386 HNGKSLEA 393
             G  L A
Sbjct: 600 MLGYVLNA 607



 Score = 39.7 bits (91), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 38/73 (52%)

Query: 209 PNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKL 268
           PN +I  T I+ L +  +  +A +    M+ +G+ P+  TY  LI+G C L  + +A+ L
Sbjct: 551 PNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMML 610

Query: 269 IDEMPLKGCSPDK 281
             +M   G  P +
Sbjct: 611 YADMMKIGVKPTR 623


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 225/495 (45%), Gaps = 29/495 (5%)

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A ++   +   A AP++   N+ +  L     L         M+ A + P+++TY  L+ 
Sbjct: 115 ASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLN 174

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCS--PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN 312
             C    + DA+K++D M   G     D V   TV+  LCK  R++           D+ 
Sbjct: 175 RLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQ-----------DAI 223

Query: 313 LFHDQGRIEEAKELVNQMSQM-GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
           +F D+           +M Q+ GC P+ VTY  + +  CRVG++D A +++++M   G  
Sbjct: 224 VFVDE-----------RMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVT 272

Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP--NAITYSVVMHGLRREGKLSEAC 429
           PN ++    + GLC  G+   A +        W     NA+TYS ++        ++ A 
Sbjct: 273 PNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAM 332

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
           ++  EM  +G+ P  V    +I  L + G++  A          G  ++   +  LI GF
Sbjct: 333 ELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGF 392

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
           C+K  L EA  L ++M      PD  TY T++  L K G      EL+  M+  G  P+V
Sbjct: 393 CRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSV 452

Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
           VT+ T++H YC+ G+ ++ LK+   M     Q     YN +I+ LC    ++ A K+  +
Sbjct: 453 VTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDE 512

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
           +      A+ +T + L++   +K +P  A+++  +M      PD      + E L   G+
Sbjct: 513 MRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGE 572

Query: 668 SEEADTLMLRFVERG 682
           +E     M +  E+G
Sbjct: 573 TERLKCFMEQRDEKG 587



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 200/448 (44%), Gaps = 65/448 (14%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           F+ L+ A  RAG LR    + + M++A+V P+++     ++ L     +  AL+ L+RM 
Sbjct: 134 FNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMS 193

Query: 239 LAG--ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM--PLKGCSPDKVSYYTVMGYLCKE 294
             G  +  +++  N ++ G C + R++DAI  +DE    + GC+P+ V+Y  +    C+ 
Sbjct: 194 SPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCR- 252

Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
                                  G I+ A ++V +M + G  P+V+T   +V G CRVG 
Sbjct: 253 ----------------------VGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGR 290

Query: 355 LDQAKKMLQQMYHHG--CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
           +  A    ++        + N V+Y+  ++   H      A E+ +   ++ + P+A+ Y
Sbjct: 291 VGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMY 350

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGF-------------------------------- 440
             ++ GL + G+L +AC++   M K GF                                
Sbjct: 351 FTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKG 410

Query: 441 ---FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
               P     N L+  LC+ G      + +   ++ GC  +VV F +L+ G+C+ G  +E
Sbjct: 411 AGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDE 470

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           AL +   M   +  P+TV Y T+ID L K+  V+ A +L  +M    +   V TY  ++ 
Sbjct: 471 ALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLK 530

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRTAY 585
                   E   +L+++M  +++C   Y
Sbjct: 531 GLQDKNMPEKAFELMDQM-KEERCTPDY 557



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 200/455 (43%), Gaps = 22/455 (4%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D   +  +L  L +    +G   +   M  R    +P+  +Y  L+    +AG + +A+ 
Sbjct: 130 DVSTFNSLLSALGRAGNLRGMTELFTSM--REASVKPDIVTYGILLNRLCKAGLVGDALK 187

Query: 198 VLSMMQKAA--VAPNLLICNTAIHVLVVGNKLAKALRFL-ERM-QLAGITPNVLTYNCLI 253
           VL  M      V  +++I NT +  L    +L  A+ F+ ERM Q+ G  PN +TYNCL 
Sbjct: 188 VLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLA 247

Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK------- 306
              C +  I  A ++++ M  +G +P+ ++  T++G LC+  R+    D   +       
Sbjct: 248 DACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLE 307

Query: 307 ----MVNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                V  S L   F     +  A EL ++M+  G  PD V Y  +++G  + G L  A 
Sbjct: 308 ARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDAC 367

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
            +   M   G K +  +Y   + G C   +  EA ++    +     P+  TY+ ++  L
Sbjct: 368 NIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCL 427

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
            + G  S   +++  M+  G  P+ V    L+   C+ GK D A K  +         N 
Sbjct: 428 CKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNT 487

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           V + +LI   C+  +++ A+ L D+M       +  TY  ++  L      E+A ELM +
Sbjct: 488 VIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQ 547

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
           M  +   P  VT   ++    ++G  E L   +E+
Sbjct: 548 MKEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQ 582



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 144/307 (46%), Gaps = 25/307 (8%)

Query: 172 IECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
           +E R  A +Y  L+ A+     +  AM +   M      P+ ++  T I  L    +L  
Sbjct: 306 LEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVD 365

Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
           A      M+ AG   +   YN LI G+C   R+ +A +L +EM   G  PD  +Y T++ 
Sbjct: 366 ACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLS 425

Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            LCK      V +L+  M++D                       GC P VVT+  +V+G+
Sbjct: 426 CLCKAGDFSAVDELLGNMIDD-----------------------GCQPSVVTFGTLVHGY 462

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C+ G+ D+A K+ + M     +PNTV Y   ++ LC + +   A ++ +   E     N 
Sbjct: 463 CKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANV 522

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
            TY+ ++ GL+ +    +A +++ +M ++   P  V +++L++ L   G+ +  K FM++
Sbjct: 523 TTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQ 582

Query: 470 CLNKGCA 476
              KG A
Sbjct: 583 RDEKGGA 589



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 13/259 (5%)

Query: 123 VALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYL 182
           +A++ F+    Q  Y  D ++Y+ M+  L++      A  +   M + G +   +A++ L
Sbjct: 330 LAMELFHEMADQG-YPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNIL 388

Query: 183 MVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
           +  + R  +L  A  +   M+ A + P++   NT +  L      +     L  M   G 
Sbjct: 389 IGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGC 448

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
            P+V+T+  L+ GYC   +  +A+K+   M      P+ V Y T++ +LCK + +     
Sbjct: 449 QPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIK 508

Query: 303 LMEKM--------VNDSNL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
           L ++M        V   N       D+   E+A EL++QM +  C PD VT   ++    
Sbjct: 509 LFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLP 568

Query: 351 RVGELDQAKKMLQQMYHHG 369
            +GE ++ K  ++Q    G
Sbjct: 569 EIGETERLKCFMEQRDEKG 587



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           + A  L D +      PD  T+ +++ AL + G +   TEL   M    + P +VTY  +
Sbjct: 113 DAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGIL 172

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRTA----YNQVIENLCSFGYLEEA 601
           ++R C+ G V D LK+L++M S      A     N V++ LC  G L++A
Sbjct: 173 LNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDA 222


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 170/734 (23%), Positives = 306/734 (41%), Gaps = 135/734 (18%)

Query: 69  EEDEFRHP-LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRS-QADERVALQ 126
           E     HP L+  + RL+ L    S      L NL          ++LR  +      L 
Sbjct: 33  ETTNLPHPELLDRITRLLILNRPQS------LHNLTFKYSDHLTDSLLRRLRLHPSACLS 86

Query: 127 FFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMA--------RRGIECR--- 175
           FF+ A +   YR   + Y ++L IL+  +L   A  VLR +         R    C    
Sbjct: 87  FFHLATQNSHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVF 146

Query: 176 ---------PEAFSYLMVAYSRAGKLRNAMYVLSMMQK---------------------- 204
                       F  LM A++  G  ++A+YV   M +                      
Sbjct: 147 SVYKEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGE 206

Query: 205 -------------AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
                          + P++ +C+  ++      ++  A+  LE+M   G+ PNV+TYN 
Sbjct: 207 GRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNG 266

Query: 252 LIKGYC---DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           L+ GY    D   ++  ++L+ E   +G S + V+   +M   CK+ ++ E   L+ ++ 
Sbjct: 267 LVNGYVGRGDFEGVERVLRLMSE---RGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVE 323

Query: 309 NDSNLFHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
            D  L  D+             GR+E+A  + ++M ++G   ++V    ++ G+C++G++
Sbjct: 324 EDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQV 383

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
            +A+++   M     KP+  SY   L+G C  GK  +A  +      +  TP  +TY+ V
Sbjct: 384 CEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTV 443

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + GL   G   +A  +   MV++G  P  +    ++    + G  D A    +E L +G 
Sbjct: 444 IKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGF 503

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA-- 533
             + V F ++I G C+ G L EA ++ D M      PD +TY T+ D   KNG V+EA  
Sbjct: 504 TKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQ 563

Query: 534 ---------------------------------TELMMKMLSKGLVPTVVTYRTVIHRYC 560
                                            T+L+++M ++GL P VVTY T+I  +C
Sbjct: 564 IKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWC 623

Query: 561 QVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
              +++    L  +M+ +         ++++ +L     + EA  IL K+L     A  +
Sbjct: 624 DEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHN 683

Query: 619 TCHVLVESYLNKGIPLLAYKVA--------CRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
            C    +  +   + L A K+A        C   + N++ ++ +     + L   GK +E
Sbjct: 684 KCS---DKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAI-----DGLCKSGKLDE 735

Query: 671 ADTLMLRFVERGHI 684
           A +++   + RG +
Sbjct: 736 ARSVLSVLMSRGFL 749



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 139/552 (25%), Positives = 259/552 (46%), Gaps = 39/552 (7%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           +G +RVLRLM+ RG+       + LM  Y + GK+  A  +L  +++      LL+ +  
Sbjct: 278 EGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEE----DELLVVDER 333

Query: 218 IH-VLVVG----NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
           ++ VLV G     ++  A+R  + M   G+  N++  N LIKGYC L ++ +A ++   M
Sbjct: 334 VYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGM 393

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRI 320
                 PD  SY T++   C+E ++ +   L E+M+ D                 D G  
Sbjct: 394 VDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSY 453

Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
           ++A  L + M + G  P+ ++   +++ F ++G+ D+A  + +++   G   +TV++   
Sbjct: 454 DDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTM 513

Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
           ++GLC  GK +EA  + +  +E   +P+ ITY  +  G  + G + EA  +   M ++  
Sbjct: 514 ISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAM 573

Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
             +    N LI  L +  K++     + E   +G + NVV + +LI G+C +  L++A  
Sbjct: 574 SASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFH 633

Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
           L  +M      P+ V  + I+ +L ++ R+ EAT ++ KML   ++         +H  C
Sbjct: 634 LYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILA--------VHNKC 685

Query: 561 QVGRVEDLL-----KLLEKMLSKQKCRT-----AYNQVIENLCSFGYLEEAGKILGKVLR 610
               V++ L     K+ + +     C +      YN  I+ LC  G L+EA  +L  ++ 
Sbjct: 686 SDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMS 745

Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
                D  T   L+ +    G    A+K+   M  + LIP++ +   +   L   G  + 
Sbjct: 746 RGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDR 805

Query: 671 ADTLMLRFVERG 682
           A  L  +  ++G
Sbjct: 806 AQRLFYKLYQKG 817



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 130/529 (24%), Positives = 230/529 (43%), Gaps = 60/529 (11%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D  VY ++++   +    + A R+   M R G++      + L+  Y + G++  A  V 
Sbjct: 331 DERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVF 390

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    + P+    NT +       K++KA    E M   GITP V+TYN +IKG  D+
Sbjct: 391 VGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDV 450

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
               DA+ L   M  +G +P+++S  T++                       + F   G 
Sbjct: 451 GSYDDALHLWHLMVERGVTPNEISCCTML-----------------------DCFFKMGD 487

Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
            + A  L  ++   G     V +  +++G C++G+L +A  +  +M   G  P+ ++Y  
Sbjct: 488 SDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRT 547

Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
             +G C NG   EA ++    E +  + +   Y+ ++ GL +  KL++  D++ EM  +G
Sbjct: 548 LSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRG 607

Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
             P  V    LI   C E K+D A     E + +G   NVV  + ++    +   + EA 
Sbjct: 608 LSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEAT 667

Query: 500 SLLDDMY-----------------------------------LCKKDPDTVTYTTIIDAL 524
            +LD M                                    +C    + + Y   ID L
Sbjct: 668 VILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGL 727

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR-- 582
            K+G+++EA  ++  ++S+G +P   TY T+IH     G V++  KL ++ML K      
Sbjct: 728 CKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNI 787

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
           T YN +I  LC  G ++ A ++  K+ +     +A T ++L+  Y   G
Sbjct: 788 TIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIG 836



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/464 (23%), Positives = 204/464 (43%), Gaps = 49/464 (10%)

Query: 135 WRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRN 194
           W  + D   Y  +L+   +      A  +   M   GI      ++ ++      G   +
Sbjct: 396 WNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDD 455

Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
           A+++  +M +  V PN + C T +          +A+   + +   G T + + +N +I 
Sbjct: 456 ALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMIS 515

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLMEK----- 306
           G C + ++ +A  + D M   G SPD+++Y T+    CK   ++E   ++ +ME+     
Sbjct: 516 GLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSA 575

Query: 307 ---MVND--SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
              M N     LF  + ++ +  +L+ +M   G  P+VVTY  +++G+C   +LD+A  +
Sbjct: 576 SIEMYNSLIDGLFKIR-KLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHL 634

Query: 362 LQQMYHHGCKPNTVSYTAFLNGL--------------------------------CHNGK 389
             +M   G  PN V  +  ++ L                                  N  
Sbjct: 635 YFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDL 694

Query: 390 SLEAREMINTSEEE---WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
           +LEA+++ ++ ++        N I Y++ + GL + GKL EA  V+  ++ +GF P    
Sbjct: 695 TLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFT 754

Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
              LI +    G +D A K   E L KG   N+  + +LI G C+ G+++ A  L   +Y
Sbjct: 755 YCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLY 814

Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
                P+ VTY  +I    + G +++A+ L  KM  +G+   ++
Sbjct: 815 QKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 217/472 (45%), Gaps = 13/472 (2%)

Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
            D   AL  F    ++   + + + +  ++  L K      A  V + M   G++     
Sbjct: 139 GDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNV 198

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
            + L+    R G LR A  +L  M   A A +       ++      ++ +   F+E  +
Sbjct: 199 CNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELAR 258

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
             G   + + YN +I+G+    R+ +A +L +    K   PD  +Y  ++  LCK K+++
Sbjct: 259 HDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIA-LCKSKQLE 317

Query: 299 EVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           E   L ++                 + F   GR  +A E+   M + GC+PD V Y  ++
Sbjct: 318 EALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLI 377

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +   + G++D+A ++L+ M   G  P+  +Y   ++ L   G+  +A       +    +
Sbjct: 378 SCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHS 437

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ +TY+ +++GL++  +  EACD+  EM      P       LI +L + G+M+ A + 
Sbjct: 438 PDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQ 497

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
               +  G A N   + +LI GFC+ G +++   L  DM  C   PD++TYT ++   S+
Sbjct: 498 SARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSR 557

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
            G    A EL+ +M+ +G  P + TY  +I      G+VED   L ++M++K
Sbjct: 558 RGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAK 609



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/549 (24%), Positives = 244/549 (44%), Gaps = 51/549 (9%)

Query: 185 AYSRAGKLRNAMYVLSMMQKAAVA-PNLLICNTAIHVLVVGNKLAKALRFLERM-QLAGI 242
           A+ RAG L  AM +L  M++     P+ +    A+H L    ++ +A+   + M +    
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG-CSPDKVSYYTVMGYLCKEKRIKEVR 301
            P+V+ YN LI GYC       A+ +   +  +G C P+ VS+ T++ +LCK  R  +  
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 302 DLMEKM--------VNDSN-LFHDQ---GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            + ++M        VN  N L H     G + +A+ L++ M+   C  D  TY  +VN  
Sbjct: 182 AVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAH 241

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           CR G++ +    ++   H GC  + V+Y   + G    G+  EA ++  ++  +   P+ 
Sbjct: 242 CRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDV 301

Query: 410 ITY----------------------------------SVVMHGLRREGKLSEACDVVREM 435
            TY                                  S +M    + G+ ++A +V   M
Sbjct: 302 FTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNM 361

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
            K G  P  V  N+LI  L ++GK+D A + +++   KG   +   +  +I      G  
Sbjct: 362 QKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRY 421

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           E+A S    M   K  PD VTY T+++ L K  R +EA +L  +M +   +P + T+ T+
Sbjct: 422 EKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTL 481

Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           I    + GR+ED L+   +++       +  YN +I   C  G +++  ++   ++  + 
Sbjct: 482 IDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSC 541

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADT 673
             D+ T  +LV  +  +G   +A ++   M      P L     +   L + G+ E+A T
Sbjct: 542 FPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYT 601

Query: 674 LMLRFVERG 682
           L    + +G
Sbjct: 602 LFKEMIAKG 610



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/502 (24%), Positives = 232/502 (46%), Gaps = 18/502 (3%)

Query: 169 RRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVVGN 225
           R   +C P+  +Y  L+  Y +AG    A+ +   + Q+ +  PN +  +T +  L   +
Sbjct: 116 RETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMS 175

Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
           +   AL   + M  AG+  +V   N LI   C L  ++ A +L+  M    C+ D  +Y 
Sbjct: 176 RATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYG 235

Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQM 333
            ++   C+  ++ EV   ME   +D               F   GR+ EA +L       
Sbjct: 236 ILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTK 295

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
             +PDV TY  ++   C+  +L++A  + Q+    G   +  +Y+  ++     G++ +A
Sbjct: 296 ESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKA 354

Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
            E+    ++    P+ + Y+V++  L ++GK+ EA +++ +M +KG  P     N++I  
Sbjct: 355 LEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDV 414

Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
           L   G+ + A  F      +  + +VV + +L+ G  +    +EA  L D+M   K  PD
Sbjct: 415 LSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPD 474

Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
             T+ T+ID L+K GR+E+A E   +++  G  P    Y  +I  +C+ G+V+   +L +
Sbjct: 475 LTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQ 534

Query: 574 KML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            M+  S       Y  ++      G+   A ++L +++R       +T +VL+ S    G
Sbjct: 535 DMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAG 594

Query: 632 IPLLAYKVACRMFNRNLIPDLK 653
               AY +   M  +   PD++
Sbjct: 595 QVEDAYTLFKEMIAKGFNPDMQ 616



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 192/410 (46%), Gaps = 17/410 (4%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A+R+L  M      C  +AF+Y  L+ A+ RAG++      + + +    A + +  N  
Sbjct: 215 ARRLLHHMTAHA--CARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFI 272

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I   +   +LA+A +  E        P+V TYN LI   C   ++++A+ L  E    G 
Sbjct: 273 IQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGV 331

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFH-------DQGRIEEAKE 325
             D  +Y  +M    K  R  +  ++   M     + D+ +++        QG+++EA E
Sbjct: 332 VLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALE 391

Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
           L+  M++ G +PD  TY  V++     G  ++A      M      P+ V+Y   LNGL 
Sbjct: 392 LLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLK 451

Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
              ++ EA ++ +  +     P+  T+  ++  L + G++ +A +    +VK G  P   
Sbjct: 452 KLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSY 511

Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
             N LI   CR G++D   +  Q+ +   C  + + +T L+ GF ++G    A+ LL +M
Sbjct: 512 IYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEM 571

Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
                 P   TY  +I +LS  G+VE+A  L  +M++KG  P + TY  +
Sbjct: 572 VREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 200/468 (42%), Gaps = 73/468 (15%)

Query: 265 AIKLIDEMPLKG-CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
           A+ ++D+M     C PD V++   M +LC      EVR                 R+E+A
Sbjct: 72  AMGMLDDMRRGNFCQPDTVAFTAAMHWLC------EVR-----------------RVEQA 108

Query: 324 KELVNQMSQM-GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVSYTAFL 381
             L + M +   C PDVV Y  ++ G+C+ G+ D+A  M +++   G CKPN VS+   +
Sbjct: 109 MTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLV 168

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
             LC   ++ +A  +           +    + ++H   R G L +A  ++  M      
Sbjct: 169 IFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACA 228

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
                  +L+ + CR G+M     FM+   + GCA++ VN+  +I+GF + G L EA  L
Sbjct: 229 RDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQL 288

Query: 502 LDD----------------MYLCKKDP------------------DTVTYTTIIDALSKN 527
            +                 + LCK                     D  TY+ ++DA  K 
Sbjct: 289 FESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKA 348

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK---QKCRTA 584
           GR  +A E+   M   G +P  V Y  +I    + G+V++ L+LLE M  K     CRT 
Sbjct: 349 GRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRT- 407

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN VI+ L S G  E+A    G + R     D  T + L    LN    L     AC +F
Sbjct: 408 YNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTL----LNGLKKLRRTDEACDLF 463

Query: 645 N----RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
           +       +PDL     + + L   G+ E+A     R V+ GH  P S
Sbjct: 464 DEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGH-APNS 510



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 168/365 (46%), Gaps = 15/365 (4%)

Query: 179 FSYLMVAYSRAGKLRNAMYVL-SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           +++++  + R G+L  A  +  S M K +V P++   N  I  L    +L +AL   +  
Sbjct: 269 YNFIIQGFIRCGRLAEATQLFESTMTKESV-PDVFTYNLLI-ALCKSKQLEEALTLFQEA 326

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
           +  G+  +V TY+ L+  +    R   A+++   M   GC PD V Y  ++  L K+ ++
Sbjct: 327 EQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKV 386

Query: 298 KEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            E  +L+E M                ++    GR E+A      M +    PDVVTY  +
Sbjct: 387 DEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTL 446

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           +NG  ++   D+A  +  +M  + C P+  ++   ++ L   G+  +A E      +   
Sbjct: 447 LNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGH 506

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
            PN+  Y+ ++ G  R G++ +  ++ ++M++   FP  +   +L+    R G    A +
Sbjct: 507 APNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAME 566

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            +QE + +G    +  +  LIR     G +E+A +L  +M     +PD  TY+ + +  +
Sbjct: 567 LLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNLST 626

Query: 526 KNGRV 530
            N  V
Sbjct: 627 PNKSV 631



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 165/374 (44%), Gaps = 7/374 (1%)

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVS 376
           GR E   EL+ ++ Q G     VT T  +  F R G+LD A  ML  M     C+P+TV+
Sbjct: 32  GRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVA 91

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEW-WTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +TA ++ LC   +  +A  + +   E     P+ + Y+ ++ G  + G    A D+ R +
Sbjct: 92  FTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRL 151

Query: 436 VKKGFF-PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
            ++G   P  V  + L+  LC+  +   A    QE L  G   +V    +LI   C+ G 
Sbjct: 152 KQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGM 211

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           L +A  LL  M       D  TY  +++A  + G++ E    M      G   + V Y  
Sbjct: 212 LRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNF 271

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I  + + GR+ +  +L E  ++K+       YN +I  LC    LEEA  +  +  +  
Sbjct: 272 IIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIA-LCKSKQLEEALTLFQEAEQGG 330

Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
              D  T   L++++   G    A +V   M     +PD  +   +   L  +GK +EA 
Sbjct: 331 VVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEAL 390

Query: 673 TLMLRFVERGHIQP 686
            L L  + R  I P
Sbjct: 391 EL-LEDMNRKGIMP 403



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 9/207 (4%)

Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           + ++K G          +++ +C+ G+ +   + + E   KG  ++ V  T  I+ F + 
Sbjct: 7   KHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRA 66

Query: 493 GDLEEALSLLDDM---YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK-GLVPT 548
           GDL+ A+ +LDDM     C+  PDTV +T  +  L +  RVE+A  L   M       P 
Sbjct: 67  GDLDAAMGMLDDMRRGNFCQ--PDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPD 124

Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKIL 605
           VV Y T+I  YC+ G  +  L +  ++  +  C+    +++ ++  LC      +A  + 
Sbjct: 125 VVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVF 184

Query: 606 GKVLRTASKADASTCHVLVESYLNKGI 632
            ++L    KAD + C+ L+      G+
Sbjct: 185 QEMLGAGLKADVNVCNTLIHCTCRLGM 211


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 144/596 (24%), Positives = 267/596 (44%), Gaps = 64/596 (10%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y ++ ++Y+++     K+     A  V + M   GI      +S LMVA+ +   +   +
Sbjct: 172 YTYNGLIYFLV-----KSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVL 226

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
           ++L+ M+   V PN+      I VL    +  +A   L +M+ +G  P+V+T+  +I+  
Sbjct: 227 WLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVL 286

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
           CD  R+ DA  +  +M      PD+V+Y T++         + V ++   MV D   ++D
Sbjct: 287 CDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADG--YND 344

Query: 317 Q--------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                          GR++EA  + ++M + G  P+  +Y ++++GF +    D+A ++ 
Sbjct: 345 NIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELF 404

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
             M   G  PN  ++  F+N    +G+SL+A +     + +   P+    + V++ L   
Sbjct: 405 NHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGS 464

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
           G+L  A  V  E+   G  P  +   ++I+   +  K D A  F  + +  GC  +V+  
Sbjct: 465 GRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLAL 524

Query: 483 TSLI-----------------------------------RGFCQKGDLEEALSLLDDMYL 507
            SLI                                    G  ++G ++E + LL++M  
Sbjct: 525 NSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTR 584

Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
               P+ +TY T++D LSKNG V  A +++  M  KG  P + +Y TV++   +  R+E+
Sbjct: 585 TIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEE 644

Query: 568 LLKLLEKMLSKQKCRTAYNQVIENLCSF---GYLEEAGKILGK-VLRTASKADASTCHVL 623
             ++  +M  K+     Y  +   L SF   G ++EA   + + +L+     D S+ H L
Sbjct: 645 AFRMFCQM--KKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSL 702

Query: 624 VESYLNKGIPLLAYKVACRMFNRN-LIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
           +E  L K     + + A  + +R  L+ D  LC  +   L    K+ EA  L  +F
Sbjct: 703 MEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLI-RHLCKHKKALEAHQLFNKF 757



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 146/621 (23%), Positives = 262/621 (42%), Gaps = 50/621 (8%)

Query: 100 RNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQG 159
           R+  R +    +  +LRS  D   AL+ F  A RQ    H       MLE++        
Sbjct: 60  RDERRVVGTDSVVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGD 119

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
             +V  LM ++ ++     F+ +       G LR+A   L +M++A ++ N    N  I+
Sbjct: 120 MAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIY 179

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            LV     A+A+   + M   GI+P+V TY+ L+  +     +   + L++EM  +G  P
Sbjct: 180 FLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKP 239

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAK--- 324
           +  SY   +  L +  R  E   ++ KM +               +  D GR+ +AK   
Sbjct: 240 NVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVF 299

Query: 325 --------------------------------ELVNQMSQMGCIPDVVTYTAVVNGFCRV 352
                                           E+ N M   G   ++V+YTAVV+  C+V
Sbjct: 300 WKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQV 359

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
           G +D+A  +  +M   G  P   SY + ++G         A E+ N       +PN  T+
Sbjct: 360 GRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTH 419

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
            + ++   + G+  +A      M  KG  P     N ++ SL   G++  AK+   E   
Sbjct: 420 VLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKA 479

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            G + + + +T +I+   +    +EA++   DM      PD +   ++ID L K G+  E
Sbjct: 480 MGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNE 539

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIE 590
           A +L  K+    + PT  TY T++    + G+V+++++LLE+M           YN V++
Sbjct: 540 AWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLD 599

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
            L   G +  A  +L  +       D S+ + ++   + +     A+++ C+M  + L P
Sbjct: 600 CLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKILAP 658

Query: 651 DLKLCKKVSERLILEGKSEEA 671
           D      +    +  G  +EA
Sbjct: 659 DYATLCTILPSFVKNGLMKEA 679



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 130/593 (21%), Positives = 254/593 (42%), Gaps = 89/593 (15%)

Query: 112  CAVLRSQADERVALQFFYWADR-QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
            C    S+ADE  A+ FF  +D  +     D +    +++ L K      A ++   +   
Sbjct: 495  CCSKASKADE--AMNFF--SDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEM 550

Query: 171  GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
             IE     ++ L+    R GK++  M +L  M +    PNL+  NT +  L    ++  A
Sbjct: 551  KIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCA 610

Query: 231  LRFLERMQLAGITPNVLTYNCLIKG-------------YCDLHRI--------------- 262
            +  L  M   G  P++ +YN ++ G             +C + +I               
Sbjct: 611  IDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKILAPDYATLCTILPSF 670

Query: 263  ------KDAIKLIDEMPLK-GCSPDKVSYYTVMG-------------------------- 289
                  K+A+  + E  LK GC+ DK S++++M                           
Sbjct: 671  VKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLN 730

Query: 290  ---------YLCKEKRIKEVRDLMEKMVN-----DSNLFH-------DQGRIEEAKELVN 328
                     +LCK K+  E   L  K         +  ++       D+  I+ A++L  
Sbjct: 731  DFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFT 790

Query: 329  QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            +M ++GC PD  TY  +++   +   +++  K+ ++M+  G +   V+Y   ++GL  + 
Sbjct: 791  EMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSK 850

Query: 389  KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
            +  +A ++      E ++P   TY  ++ GL + GK+ +A ++  EM++ G  P     N
Sbjct: 851  RLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYN 910

Query: 449  LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            +L+      G  +   +  ++ + +G   ++ ++T LI   C  G L + L     ++  
Sbjct: 911  ILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHEL 970

Query: 509  KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
              +PD + Y  +ID L K+ R+EEA  L  +M  KG++P + TY ++I    + G+  + 
Sbjct: 971  GLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEA 1030

Query: 569  LKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
             ++ E++L K  +     YN +I      G  + A    G+++    + ++ST
Sbjct: 1031 AQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSST 1083



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 149/322 (46%), Gaps = 12/322 (3%)

Query: 215  NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
            N+ I  LV  N +  A      M+  G  P+  TYN ++       R+++ +K+  EM  
Sbjct: 770  NSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHR 829

Query: 275  KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEE 322
            KG     V+Y T++  L K KR+++  DL   ++++             +     G++ +
Sbjct: 830  KGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVD 889

Query: 323  AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
            A+ L N+M + GC P+   Y  ++NG    G  +   ++ ++M   G  P+  SYT  ++
Sbjct: 890  AENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILID 949

Query: 383  GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
             LC  G+  +         E    P+ I Y++++ GL +  ++ EA  +  EM KKG  P
Sbjct: 950  TLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIP 1009

Query: 443  TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
                 N LI  L + GK   A +  +E L KG   +V  + +LIRG+   G  + A +  
Sbjct: 1010 NLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAY 1069

Query: 503  DDMYLCKKDPDTVTYTTIIDAL 524
              M +    P++ TY  + + L
Sbjct: 1070 GQMIVGGCQPNSSTYMQLPNQL 1091



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 167/378 (44%), Gaps = 15/378 (3%)

Query: 188  RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
            +AG  ++  +  ++  +  +  +  +C    H L    K  +A +   + +  G++    
Sbjct: 709  KAGVEKSIEFAENIASRGILLNDFFLCPLIRH-LCKHKKALEAHQLFNKFKGLGVSLKTG 767

Query: 248  TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
            +YN LI+G  D + I  A  L  EM   GC PD+ +Y  ++  + K  R++E+  + ++M
Sbjct: 768  SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEM 827

Query: 308  VND-------------SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
                            S L   + R+E+A +L   +   G  P   TY  +++G  + G+
Sbjct: 828  HRKGYESTYVTYNTIISGLVKSK-RLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGK 886

Query: 355  LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
            +  A+ +  +M  +GC+PN   Y   LNG    G +    ++     E+   P+  +Y++
Sbjct: 887  MVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTI 946

Query: 415  VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
            ++  L   G+L++     R++ + G  P  +  NLLI  L +  +++ A     E   KG
Sbjct: 947  LIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKG 1006

Query: 475  CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
               N+  + SLI    + G   EA  + +++      P   TY  +I   S +G  + A 
Sbjct: 1007 IIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAY 1066

Query: 535  ELMMKMLSKGLVPTVVTY 552
                +M+  G  P   TY
Sbjct: 1067 AAYGQMIVGGCQPNSSTY 1084



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 97/423 (22%), Positives = 175/423 (41%), Gaps = 62/423 (14%)

Query: 65   RVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVA 124
            R +L  D F  PL+R +C+    ++  + +L  + + L  SLK     +++R   DE   
Sbjct: 725  RGILLNDFFLCPLIRHLCK--HKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDEN-- 780

Query: 125  LQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV 184
                                  +++I         A+ +   M R G  C P+ F+Y ++
Sbjct: 781  ----------------------LIDI---------AEDLFTEMKRLG--CGPDEFTYNLI 807

Query: 185  --AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGI 242
              A  ++ ++   + V   M +       +  NT I  LV   +L +A+     +   G 
Sbjct: 808  LDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGF 867

Query: 243  TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
            +P   TY  L+ G     ++ DA  L +EM   GC P+     T+   L    RI     
Sbjct: 868  SPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPN----CTIYNILLNGHRI----- 918

Query: 303  LMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
                           G  E   +L  +M + G  PD+ +YT +++  C  G L+      
Sbjct: 919  --------------AGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYF 964

Query: 363  QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            +Q++  G +P+ + Y   ++GL  + +  EA  + N  +++   PN  TY+ ++  L + 
Sbjct: 965  RQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKA 1024

Query: 423  GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            GK +EA  +  E+++KG+ P+    N LI+     G  D A     + +  GC  N   +
Sbjct: 1025 GKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTY 1084

Query: 483  TSL 485
              L
Sbjct: 1085 MQL 1087


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 194/418 (46%), Gaps = 31/418 (7%)

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           V+P++   NT I  L    +L KA    + ++  G+ P+V TYN LI GYC      +  
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246

Query: 267 K---LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
               L+ EM   G SP  V++  ++   CK                +SN          A
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCK----------------NSN-------TAAA 283

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
             +  +M Q G    VVTY ++++G C  G++++  K++++M   G  PN +++   L G
Sbjct: 284 VRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKG 343

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
            C  G   +A + I+   E    P+ + Y++++ G RR GK+ +A  V   M KKG  P 
Sbjct: 344 FCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPN 403

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
               N LI    R G    A   + E   KG   +VV +  LI   C KG++ +A+ LLD
Sbjct: 404 VTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLD 463

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M     +P+ +TY TII      G ++ A E+  +M        VVTY   I  +CQ+G
Sbjct: 464 EMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIG 523

Query: 564 RVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
           ++++   LL +ML K        Y  + E +   GY  +   I G  +  AS+  AS+
Sbjct: 524 KMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD---IRGCTVSQASENPASS 578



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 213/462 (46%), Gaps = 28/462 (6%)

Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
           + A+ R+    R    F    +   R+R        +L  L   K    A++  R   RR
Sbjct: 126 VLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR 185

Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV----VGNK 226
            +      F+ ++    R G+LR A  V   ++   +AP++   N+ I         GN 
Sbjct: 186 RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGN- 244

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           +      L+ M  AGI+P  +T+  LI GYC       A+++ +EM  +G +   V+Y +
Sbjct: 245 MYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNS 304

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LC E                       G++EE  +L+ +M  +G  P+ +T+  V+
Sbjct: 305 LISGLCSE-----------------------GKVEEGVKLMEEMEDLGLSPNEITFGCVL 341

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
            GFC+ G +  A   +  M     +P+ V YT  ++G    GK  +A  +     ++  +
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGIS 401

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           PN  TY+ ++ G  R G    A  ++ EM +KG     V  N+LI +LC +G++  A K 
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           + E    G   N + + ++I+GFC KG+++ A  +   M  C+K  + VTY   I    +
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
            G+++EA +L+ +ML K LVP  +TY T+     + G   D+
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDI 563



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 191/395 (48%), Gaps = 28/395 (7%)

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
           ++P++ T+N +I G C + +++ A  +  ++   G +P   +Y +++   CK+       
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG------ 240

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                     N++H          L+ +M + G  P  VT+  ++NG+C+      A ++
Sbjct: 241 -------GAGNMYH-------VDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRV 286

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
            ++M   G   + V+Y + ++GLC  GK  E  +++   E+   +PN IT+  V+ G  +
Sbjct: 287 FEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCK 346

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
           +G +++A D +  M ++   P  V   +LI    R GKM+ A    +    KG + NV  
Sbjct: 347 KGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTT 406

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           +  LI GF + GD   A  LLD+M     + D VTY  +I AL   G V +A +L+ +M 
Sbjct: 407 YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS 466

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR-----TAYNQVIENLCSFG 596
             GL P  +TY T+I  +C  G ++   ++  +M   +KCR       YN  I+  C  G
Sbjct: 467 EVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM---EKCRKRANVVTYNVFIKYFCQIG 523

Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            ++EA  +L ++L      +  T   + E  + KG
Sbjct: 524 KMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 164/316 (51%), Gaps = 13/316 (4%)

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS------ 390
           PD+ T+  V++G CR+G+L +A  + + +   G  P+  +Y + ++G C  G +      
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHV 248

Query: 391 -LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
            +  +EM+    E   +P A+T+ V+++G  +    + A  V  EM ++G   + V  N 
Sbjct: 249 DMLLKEMV----EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNS 304

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
           LI  LC EGK++   K M+E  + G + N + F  +++GFC+KG + +A   +D M    
Sbjct: 305 LISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERN 364

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
            +PD V YT +ID   + G++E+A  +   M  KG+ P V TY  +I  + + G      
Sbjct: 365 VEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSAS 424

Query: 570 KLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
            LL++M  K  +     YN +I  LC  G + +A K+L ++     + +  T + +++ +
Sbjct: 425 GLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484

Query: 628 LNKGIPLLAYKVACRM 643
            +KG    AY++  RM
Sbjct: 485 CDKGNIKSAYEIRTRM 500



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 5/281 (1%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+  + + ++ GL    ++  A    R  +++   P     N +I  LCR G++  A   
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQK---GDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
            ++    G A +V  + SLI G+C+K   G++     LL +M      P  VT+  +I+ 
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKC 581
             KN     A  +  +M  +G+  +VVTY ++I   C  G+VE+ +KL+E+M  L     
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
              +  V++  C  G + +A   +  +     + D     +L++ Y   G    A  V  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            M  + + P++     +       G    A  L+    E+G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 10/252 (3%)

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P+   +N L+  L    ++D A+K  +  L +  + ++  F ++I G C+ G L +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKN---GRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
             D+      P   TY ++ID   K    G +     L+ +M+  G+ PT VT+  +I+ 
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTA----YNQVIENLCSFGYLEEAGKILGKVLRTASK 614
           YC+       +++ E+M  KQ+   A    YN +I  LCS G +EE  K++ ++      
Sbjct: 274 YCKNSNTAAAVRVFEEM--KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 615 ADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTL 674
            +  T   +++ +  KG+   A      M  RN+ PD+ +   + +     GK E+A  +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAV 391

Query: 675 MLRFVERGHIQP 686
                ++G I P
Sbjct: 392 KEAMAKKG-ISP 402


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 142/547 (25%), Positives = 241/547 (44%), Gaps = 43/547 (7%)

Query: 102 LLRSLKPRQIC-AVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGA 160
           L R L P  +  A+L +       L+ F ++    R R   +    ++ IL  T      
Sbjct: 62  LSRRLTPHSVADALLCAALPPASRLRLFLFSALTPRLRSPLLHSRAVVPILLATDADAAM 121

Query: 161 KRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ-KAAVAPNLLICNTAIH 219
              +      G++    AF  L+ A++ AG+   A+   S M+ +    P   + N  + 
Sbjct: 122 YDAIADAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLR 181

Query: 220 VLVV-GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
           VLV  G  +  AL    RM  AG  PN  TYN L+ G C      DA+KL DEM  +G +
Sbjct: 182 VLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGIT 241

Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPD 338
           P+  ++  ++  +C                       + G+++EA+ L+N M   GC PD
Sbjct: 242 PNVKTHTILLSSMC-----------------------NAGQLKEAENLLNSMEDKGCPPD 278

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV-SYTAFLNGLCHNGKSLEARE-M 396
            VTY A ++G C+ G +D+A + L+ +   G     +  Y+  ++GL   G+  E  +  
Sbjct: 279 EVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCY 338

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +   E+  ++P+ + Y++++ G    G++ +A     EM +K F P     N L+++LC 
Sbjct: 339 MEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCD 398

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
            G +DGA+  M E       ++    T +I G C+K  ++EA+ + D M      P  +T
Sbjct: 399 SGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMT 458

Query: 517 YTTIIDALSKNGRVEEATELMMKM-------------LSKGLVPTVVTYRTVIHRYCQVG 563
           Y  +ID L +  R+EEA  L  KM             L    V    + + ++   CQ G
Sbjct: 459 YNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSG 518

Query: 564 RVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
           +V    KLL  ++          YN ++  LC    L+ A ++  ++       D  T  
Sbjct: 519 QVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYG 578

Query: 622 VLVESYL 628
            L++S L
Sbjct: 579 TLIDSLL 585



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 200/460 (43%), Gaps = 32/460 (6%)

Query: 174 CRPEAFSY---LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
           CRP  F Y   L V  +  G +  A+ + + M  A   PN    N  +  L        A
Sbjct: 169 CRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDA 228

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           L+  + M   GITPNV T+  L+   C+  ++K+A  L++ M  KGC PD+V+Y   +  
Sbjct: 229 LKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSG 288

Query: 291 LCKEKRIKEVRDLMEKMVNDSNL-------------FHDQGRIEEAKE-LVNQMSQMGCI 336
           LCK  R+ E  + +E +                       GR EE  +  +  + Q    
Sbjct: 289 LCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFS 348

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PD+V YT ++ G    G +D A     +M      P+T  Y   L  LC +G    AR +
Sbjct: 349 PDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSL 408

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           ++   +     +  T+++++HGL ++  + EA  V   MV+ G  PT +  N+LI  L R
Sbjct: 409 MSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYR 468

Query: 457 EGKMDGAKK-------------FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
             +++ A+              F++  L      +  +   L+   CQ G + +A  LL 
Sbjct: 469 AHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLR 528

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
            +      PD VTY T+++ L K   ++ A  L  ++  KG     +TY T+I    +  
Sbjct: 529 GIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAH 588

Query: 564 RVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEA 601
           R  D + L + +L        + YN ++ +LC    L +A
Sbjct: 589 RYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQA 628



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 229/507 (45%), Gaps = 44/507 (8%)

Query: 164 LRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
           L L++RR +     A + L  A   A +LR  +++ S +     +P LL     + +L+ 
Sbjct: 59  LSLLSRR-LTPHSVADALLCAALPPASRLR--LFLFSALTPRLRSP-LLHSRAVVPILLA 114

Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKV 282
            +  A     +   Q AG+ P    +  LI  +    R  +A+     M  + GC P   
Sbjct: 115 TDADAAMYDAIADAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTF 174

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
            Y  V+  L                          G +  A  L N+M   GC+P+  TY
Sbjct: 175 VYNAVLRVLVASG----------------------GVVPLALALYNRMVAAGCLPNRATY 212

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
             +++G C+ G    A K+  +M   G  PN  ++T  L+ +C+ G+  EA  ++N+ E+
Sbjct: 213 NVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMED 272

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE-INLLIQSLCREGKMD 461
           +   P+ +TY+  + GL + G++ EA + +  + + G F   ++  + LI  L   G+ +
Sbjct: 273 KGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYE 332

Query: 462 -GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
            G + +M+       + ++V +T +IRG  + G +++A +  D+M   +  PDT  Y T+
Sbjct: 333 EGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTL 392

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-- 578
           + AL  +G ++ A  LM +M    +V    T+  +IH  C+   V++ +++ + M+    
Sbjct: 393 LKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGC 452

Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKV---------LRTASKA----DASTCHVLVE 625
                 YN +I+ L     LEEA  +  K+         LR    A    D+ +   LV+
Sbjct: 453 HPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVD 512

Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDL 652
           S    G  L AYK+   + +  ++PD+
Sbjct: 513 SMCQSGQVLKAYKLLRGIMDSGVVPDV 539



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/433 (20%), Positives = 162/433 (37%), Gaps = 98/433 (22%)

Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
           ++ ++   + AG++ +A      M++    P+    NT +  L     L  A   +  M 
Sbjct: 354 YTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMA 413

Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
              +  +  T+  +I G C    + +A+++ D M   GC P  ++Y  ++  L +  R++
Sbjct: 414 QNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLE 473

Query: 299 EVRDLMEKM--VNDSNLFH-----------------------DQGRIEEAKELVNQMSQM 333
           E R L  KM   N+ +LF                          G++ +A +L+  +   
Sbjct: 474 EARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDS 533

Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKML------------------------------- 362
           G +PDVVTY  ++NG C+V  LD A ++                                
Sbjct: 534 GVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDA 593

Query: 363 ----QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA------------------------- 393
               Q + H G  P+   Y + +  LC   K  +A                         
Sbjct: 594 MTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDHLLKKYNLSAQDEVIASAR 653

Query: 394 ------------REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
                       RE+I   ++E+ + N+  Y++ + GL +  ++ +A  +   + + G  
Sbjct: 654 KKFEEGSLDEAVRELIKI-DQEYGSVNSCPYTIWLIGLIQARRIDDALKIFHILEESGID 712

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
            TP     L + LC E  +D A   M   LNK   ++      L+   C +   ++A +L
Sbjct: 713 ITPACCAHLSKYLCWEKNLDSAVDVMLYTLNKRFIMSRHVGNRLLSSLCIRHRRKDAQAL 772

Query: 502 LDDMYLCKKDPDT 514
              M+L   D D 
Sbjct: 773 AWRMHLVGYDMDA 785


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 197/406 (48%), Gaps = 25/406 (6%)

Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
           +  L    +M   GI P+V T N LI  +C L R+  A  ++ ++   GC PD  ++ T+
Sbjct: 129 STVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTL 188

Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
           +  LC E +I E   L +K + +                       G  PDVVTY  ++N
Sbjct: 189 IRGLCVEGKIGEALHLFDKTIGE-----------------------GFQPDVVTYGTLMN 225

Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
           G C+VG    A ++L+ M    C+PN ++Y   ++ LC + +  EA  + +    +  +P
Sbjct: 226 GLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISP 285

Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
           +  TY+ ++H L    +      ++ EMV     P  V  + ++ +LC+EG +  A   +
Sbjct: 286 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 345

Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
              + +G   +VV +T+L+ G C + +++EA+ + D M      P+  +Y  +I+   + 
Sbjct: 346 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 405

Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAY 585
            R+++A  L+ +M  +GL+   VTY T+IH  C VGR++  + L  +M++  +      Y
Sbjct: 406 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 465

Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
             +++ LC   +L EA  +L  +  +   AD    ++ ++     G
Sbjct: 466 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 511



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 184/400 (46%), Gaps = 23/400 (5%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI       + L+ ++    +L  A  VL+ + K    P+    NT I  L V  K
Sbjct: 138 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 197

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
           + +AL   ++    G  P+V+TY  L+ G C +     AI+L+  M  K C P+ ++Y T
Sbjct: 198 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 257

Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
           ++  LCK++++ E  +L  +M+                         G  PD+ TY +++
Sbjct: 258 IIDSLCKDRQVTEAFNLFSEMITK-----------------------GISPDIFTYNSLI 294

Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
           +  C + E      +L +M +    PN V ++  ++ LC  G    A ++++   +    
Sbjct: 295 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 354

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ +TY+ +M G     ++ EA  V   MV KG  P     N+LI   C+  +MD A   
Sbjct: 355 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 414

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           +++   +G   + V + +LI G C  G L+ A++L  +M    + PD VTY  ++D L K
Sbjct: 415 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 474

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
           N  + EA  L+  +    L   ++ Y   I   C+ G +E
Sbjct: 475 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 514



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 184/374 (49%), Gaps = 16/374 (4%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L  QM   G  PDV T   ++N FC +  L  A  +L ++   GC+P+  ++   + GL
Sbjct: 133 SLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGL 192

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  GK  EA  + + +  E + P+ +TY  +M+GL + G  S A  ++R MV+K   P  
Sbjct: 193 CVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNV 252

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           +  N +I SLC++ ++  A     E + KG + ++  + SLI   C   + +   +LL++
Sbjct: 253 IAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNE 312

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M   K  P+ V ++T++DAL K G +  A +++  M+ +G+ P VVTY  ++  +C    
Sbjct: 313 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 372

Query: 565 VEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHV 622
           +++ +K+ + M+ K       +YN +I   C    +++A  +L ++      AD  T + 
Sbjct: 373 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 432

Query: 623 LVESYLNKGIPLLAYKVACRMFNRNLIPDL--------KLCKK--VSERLIL----EGKS 668
           L+    + G    A  +   M     IPDL         LCK   ++E ++L    EG +
Sbjct: 433 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 492

Query: 669 EEADTLMLRFVERG 682
            +AD L+      G
Sbjct: 493 LDADILVYNIAIDG 506



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 166/349 (47%), Gaps = 16/349 (4%)

Query: 172 IECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV-VGNKLA 228
           + C+P+   F+ L+      GK+  A+++          P+++   T ++ L  VGN  A
Sbjct: 176 LGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSA 235

Query: 229 KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM 288
            A+R L  M      PNV+ YN +I   C   ++ +A  L  EM  KG SPD  +Y +++
Sbjct: 236 -AIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 294

Query: 289 GYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCI 336
             LC     K V  L+ +MVN              +    +G I  A ++V+ M + G  
Sbjct: 295 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 354

Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
           PDVVTYTA+++G C   E+D+A K+   M H GC PN  SY   +NG C   +  +A  +
Sbjct: 355 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 414

Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
           +     +    + +TY+ ++HGL   G+L  A  +  EMV  G  P  V   +L+  LC+
Sbjct: 415 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 474

Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
              +  A   ++         +++ +   I G C+ G+LE A  L  ++
Sbjct: 475 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 153/318 (48%), Gaps = 18/318 (5%)

Query: 175 RPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALR 232
           +P+  +Y  LM    + G    A+ +L  M +    PN++  NT I  L    ++ +A  
Sbjct: 214 QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFN 273

Query: 233 FLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLC 292
               M   GI+P++ TYN LI   C+L   K    L++EM      P+ V + TV+  LC
Sbjct: 274 LFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC 333

Query: 293 KEKRIKEVRDLMEKMVN--------------DSNLFHDQGRIEEAKELVNQMSQMGCIPD 338
           KE  I    D+++ M+               D +    +  ++EA ++ + M   GC+P+
Sbjct: 334 KEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE--MDEAVKVFDTMVHKGCVPN 391

Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
           V +Y  ++NG+C++  +D+A  +L+QM   G   +TV+Y   ++GLCH G+   A  + +
Sbjct: 392 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFH 451

Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
                   P+ +TY +++  L +   L+EA  +++ +         +  N+ I  +CR G
Sbjct: 452 EMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 511

Query: 459 KMDGAKKFMQECLNKGCA 476
           +++ A+        +G A
Sbjct: 512 ELEAARDLFSNLSCQGFA 529



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 144/301 (47%), Gaps = 2/301 (0%)

Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
           LD A     +M H    P+TV +T  L  +           +    +     P+  T ++
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           +++      +L  A  V+ +++K G  P     N LI+ LC EGK+  A     + + +G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
              +VV + +L+ G C+ G+   A+ LL  M      P+ + Y TIID+L K+ +V EA 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENL 592
            L  +M++KG+ P + TY ++IH  C +   + +  LL +M++ +       ++ V++ L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C  G +  A  ++  +++   + D  T   L++ +  +     A KV   M ++  +P++
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 653 K 653
           +
Sbjct: 393 R 393



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 2/278 (0%)

Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
           P+ + ++ ++  + +    S    +  +M   G  P    +N+LI S C   ++  A   
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
           + + L  GC  +   F +LIRG C +G + EAL L D        PD VTY T+++ L K
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--A 584
            G    A  L+  M+ K   P V+ Y T+I   C+  +V +   L  +M++K        
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
           YN +I  LC+    +    +L +++ +    +      +V++   +G+  +A+ V   M 
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349

Query: 645 NRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
            R + PD+     + +   L  + +EA  +    V +G
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 387


>gi|242036455|ref|XP_002465622.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
 gi|241919476|gb|EER92620.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
          Length = 817

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 228/483 (47%), Gaps = 45/483 (9%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           + A  VL+ M+ R         + L VA+S+ GK+ +A+ ++  M+   + P+       
Sbjct: 225 EDASAVLQRMSERAW-VDEHVLTMLAVAFSKWGKVEDAVELIGRMEALGMQPSEKTLTVL 283

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           +H      ++  A+   ++M   G + ++  Y+ LI+G CD + +  A+KL ++M     
Sbjct: 284 VHGFARQGRVDVAMDMFDKMASYGFSVDLAMYSVLIEGLCDGNEMGKAVKLYEDMKRDRV 343

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH------------------DQGR 319
           +PD      ++   C++     V   +     + N  H                  + G 
Sbjct: 344 TPDVRLLKKMIEAFCRQGDFSTVGPFI-----NENAVHLKPGSAVLLYNVILEGLTNHGE 398

Query: 320 IEEAKELVNQM---SQMGCIPDVV----------------TYTAVVNGFCRVGELDQAKK 360
           +E A +L++ M    Q G   D V                ++  VV G C+V +LD A  
Sbjct: 399 VEAASQLLSSMVRGGQRGSDDDTVGVHIVVISEDVKPNSDSFNIVVCGLCKVKKLDLALA 458

Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
           + + M   GCK   + +   +  LC++ +  EA E+ N  ++    P+  TY+ + +G+ 
Sbjct: 459 LTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKPSEFTYNSLFYGIC 518

Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
           R    S A D++REM      P       ++Q LC  G++  A +F+ E L  G   ++V
Sbjct: 519 RRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLDEMLKLGFLPDIV 578

Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
            +++ + G C+ G+ E AL L  D+      PD V +  +I+   K G+ +EA E+M +M
Sbjct: 579 TYSAAMNGMCKIGETENALGLFRDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEM 638

Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYL 598
           LSKGL P+VVTY  +I  +C+ G+++  +  + KM+ ++K  T   Y  +++ LC+ G  
Sbjct: 639 LSKGLFPSVVTYNLMIDIWCKSGKIDKAISCVYKMIDEEKPPTVVTYTSLLDGLCNAGRP 698

Query: 599 EEA 601
           +EA
Sbjct: 699 DEA 701



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 231/518 (44%), Gaps = 72/518 (13%)

Query: 131 ADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG 190
           ++R W   H   V  M+    SK    + A  ++  M   G++   +  + L+  ++R G
Sbjct: 235 SERAWVDEH---VLTMLAVAFSKWGKVEDAVELIGRMEALGMQPSEKTLTVLVHGFARQG 291

Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNV---- 246
           ++  AM +   M     + +L + +  I  L  GN++ KA++  E M+   +TP+V    
Sbjct: 292 RVDVAMDMFDKMASYGFSVDLAMYSVLIEGLCDGNEMGKAVKLYEDMKRDRVTPDVRLLK 351

Query: 247 --------------------------------LTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
                                           L YN +++G  +   ++ A +L+  M  
Sbjct: 352 KMIEAFCRQGDFSTVGPFINENAVHLKPGSAVLLYNVILEGLTNHGEVEAASQLLSSMVR 411

Query: 275 KG-------------------CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN--- 312
            G                     P+  S+  V+  LCK K++     L + MV       
Sbjct: 412 GGQRGSDDDTVGVHIVVISEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGK 471

Query: 313 --LFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
             +F+D         R++EA E+ NQM  +   P   TY ++  G CR  +   A  +L+
Sbjct: 472 LLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKPSEFTYNSLFYGICRRKDTSAAADLLR 531

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M     KP   + T  +  LC +G+  EA + ++   +  + P+ +TYS  M+G+ + G
Sbjct: 532 EMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLDEMLKLGFLPDIVTYSAAMNGMCKIG 591

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           +   A  + R++  K + P  V  N+LI    + GK D A++ M+E L+KG   +VV + 
Sbjct: 592 ETENALGLFRDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYN 651

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            +I  +C+ G +++A+S +  M   +K P  VTYT+++D L   GR +EA  L  KM  K
Sbjct: 652 LMIDIWCKSGKIDKAISCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIILWCKMSEK 711

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
           G  P  + Y   I+  C+ GR E  +   E+M  K KC
Sbjct: 712 GCSPNEIAYTAFINGLCKCGRTETAVNYYEEM--KTKC 747



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 194/417 (46%), Gaps = 28/417 (6%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           ++Y ++LE L+     + A ++L  M R G                + G   + + V  +
Sbjct: 384 LLYNVILEGLTNHGEVEAASQLLSSMVRGG----------------QRGSDDDTVGVHIV 427

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           +    V PN    N  +  L    KL  AL   + M   G    +L +N LI   C+  R
Sbjct: 428 VISEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSDR 487

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN--------- 312
           + +A ++ ++M      P + +Y ++   +C+ K      DL+ +M   S+         
Sbjct: 488 LDEAYEIFNQMKDLDLKPSEFTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTE 547

Query: 313 ---LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                   GRI EA + +++M ++G +PD+VTY+A +NG C++GE + A  + + +    
Sbjct: 548 MVQQLCFSGRITEALQFLDEMLKLGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSKC 607

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
             P+ V++   +NG    GK  EA+E++     +   P+ +TY++++    + GK+ +A 
Sbjct: 608 YLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAI 667

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
             V +M+ +   PT V    L+  LC  G+ D A     +   KGC+ N + +T+ I G 
Sbjct: 668 SCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIILWCKMSEKGCSPNEIAYTAFINGL 727

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
           C+ G  E A++  ++M     D D  +   + ++L   G+  +  EL+  +L K +V
Sbjct: 728 CKCGRTETAVNYYEEMKTKCFDLDIFSLLNLTNSLIAQGQASKGCELLKVVLQKDVV 784



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 153/684 (22%), Positives = 274/684 (40%), Gaps = 88/684 (12%)

Query: 75  HPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQ 134
           H L+ E  R    R A        LR L   L P    +V+      R AL FF WA  Q
Sbjct: 41  HHLLDEFSRPRATRDA------ARLRRLAAYLTPPAAESVILRLPSWRHALDFFRWAAEQ 94

Query: 135 WRYRHD----------------------------------PIVYYMMLEILSKTKLCQGA 160
             +RH                                   P     +L  L    L   A
Sbjct: 95  PGFRHSCYSLNAMASLLPPHQRAHLDRLATEALASRCAMTPGALGFLLRRLGAAGLPDTA 154

Query: 161 KRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNL--LICNT 216
            RV    AR  + C P +++Y  L+ A ++AG+  +A   L  M  +    ++      +
Sbjct: 155 ARVFD-AARTTLSCAPNSYTYNCLLDALAKAGRAEDAEARLQEMVASCGEESVDRYTLTS 213

Query: 217 AIHVLVVGNKLAKALRFLERM-QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK 275
            ++      +   A   L+RM + A +  +VLT   L   +    +++DA++LI  M   
Sbjct: 214 LLNCYCNAGRPEDASAVLQRMSERAWVDEHVLTM--LAVAFSKWGKVEDAVELIGRMEAL 271

Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFH-------DQGRIEEA 323
           G  P + +   ++    ++ R+    D+ +KM +     D  ++        D   + +A
Sbjct: 272 GMQPSEKTLTVLVHGFARQGRVDVAMDMFDKMASYGFSVDLAMYSVLIEGLCDGNEMGKA 331

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS--YTAFL 381
            +L   M +    PDV     ++  FCR G+       + +   H  KP +    Y   L
Sbjct: 332 VKLYEDMKRDRVTPDVRLLKKMIEAFCRQGDFSTVGPFINENAVH-LKPGSAVLLYNVIL 390

Query: 382 NGLCHNGKSLEAREMINT--------SEE-----------EWWTPNAITYSVVMHGLRRE 422
            GL ++G+   A +++++        S++           E   PN+ ++++V+ GL + 
Sbjct: 391 EGLTNHGEVEAASQLLSSMVRGGQRGSDDDTVGVHIVVISEDVKPNSDSFNIVVCGLCKV 450

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            KL  A  + ++MV  G     +  N LI  LC   ++D A +   +  +     +   +
Sbjct: 451 KKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKPSEFTY 510

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            SL  G C++ D   A  LL +M      P     T ++  L  +GR+ EA + + +ML 
Sbjct: 511 NSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLDEMLK 570

Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR----TAYNQVIENLCSFGYL 598
            G +P +VTY   ++  C++G  E+ L L   + SK  C      A+N +I      G  
Sbjct: 571 LGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSK--CYLPDVVAHNILINGFRKAGKF 628

Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
           +EA +I+ ++L         T +++++ +   G    A     +M +    P +     +
Sbjct: 629 DEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAISCVYKMIDEEKPPTVVTYTSL 688

Query: 659 SERLILEGKSEEADTLMLRFVERG 682
            + L   G+ +EA  L  +  E+G
Sbjct: 689 LDGLCNAGRPDEAIILWCKMSEKG 712



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 35/185 (18%), Positives = 77/185 (41%), Gaps = 4/185 (2%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           Y  D + + +++    K      A+ ++  M  +G+      ++ ++  + ++GK+  A+
Sbjct: 608 YLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAI 667

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
             +  M      P ++   + +  L    +  +A+    +M   G +PN + Y   I G 
Sbjct: 668 SCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIILWCKMSEKGCSPNEIAYTAFINGL 727

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE----VRDLMEKMVNDSN 312
           C   R + A+   +EM  K    D  S   +   L  + +  +    ++ +++K V  SN
Sbjct: 728 CKCGRTETAVNYYEEMKTKCFDLDIFSLLNLTNSLIAQGQASKGCELLKVVLQKDVVHSN 787

Query: 313 LFHDQ 317
            F  Q
Sbjct: 788 HFKMQ 792


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 216/446 (48%), Gaps = 21/446 (4%)

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG---ITPN 245
           +G   +A+ V   + +  +   +   N A+  +   N  A   RF  RM  AG   +TP 
Sbjct: 31  SGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRF-NRMARAGASMVTPT 89

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           V TY  LI   C   R+      +  +  KG   + + +  ++  LC +KR  +  D++ 
Sbjct: 90  VHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVL 149

Query: 306 KMVND----SNLFHD---------QGRIEEAKELVNQMSQ--MGCIPDVVTYTAVVNGFC 350
           + + +     N+F           + R +EA EL++ M+    GC+P+VV+Y+ V++G  
Sbjct: 150 RGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLL 209

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           + G+ D+A    ++M      PN V Y++ +  LC      +A E+ +   +   TPN  
Sbjct: 210 KGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCF 269

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY+ ++HG    G+L+EA   + +M   G  P  V  +  +  LC+ G+   A+K     
Sbjct: 270 TYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSM 329

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           + +G   ++  ++SL+ G+  +G L E   L D M      PD   + T+I A +K G+V
Sbjct: 330 VKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKV 389

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQV 588
           +EA  +  KM  +GL P  VTY T+I+ YC++ R+E+ L L ++M+S         YN +
Sbjct: 390 DEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIM 449

Query: 589 IENLCSFGYLEEAGKILGKVLRTASK 614
           ++ L   G    A +   +++++  K
Sbjct: 450 LQGLFRTGRTATAKEFYVQIIKSGKK 475



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 147/310 (47%), Gaps = 14/310 (4%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSM 201
           + ++L+ L      Q A  +L +MA  G  C P   SY  V     + G    A      
Sbjct: 164 HTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYRE 223

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + PN++I ++ I  L  G  + KA+   +RM   G+TPN  TY  L+ G+C   +
Sbjct: 224 MLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQ 283

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SN 312
           + +AIK +++M   G  P+ V+Y + M YLCK  R  E R + + MV           S+
Sbjct: 284 LTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSS 343

Query: 313 LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L H    +G + E   L + M Q    PD   +  ++    + G++D+A  +  +M   G
Sbjct: 344 LLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQG 403

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            KPN V+Y+  +NG C   +   A  +         +PN ITY++++ GL R G+ + A 
Sbjct: 404 LKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAK 463

Query: 430 DVVREMVKKG 439
           +   +++K G
Sbjct: 464 EFYVQIIKSG 473



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 133/289 (46%), Gaps = 12/289 (4%)

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           TP   TY +++      G+L      +  +VKKGF   P+  N L++ LC + + D A  
Sbjct: 87  TPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMD 146

Query: 466 FMQECLNK-GCAVNVVNFTSLIRGFCQKGDLEEALSLL----DDMYLCKKDPDTVTYTTI 520
            +   + +  C  NV + T +++G C +   +EAL LL    DD   C   P+ V+Y+T+
Sbjct: 147 IVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCL--PNVVSYSTV 204

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-- 578
           ID L K G  ++A     +ML + ++P VV Y ++I   C+   ++  +++ ++M+    
Sbjct: 205 IDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGV 264

Query: 579 -QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
              C T Y  ++   CS G L EA K L K+     + +  T    ++     G    A 
Sbjct: 265 TPNCFT-YTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEAR 323

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           K+   M  R L PD+     +     +EG   E   L    V+   +QP
Sbjct: 324 KIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQS-DMQP 371



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 134/309 (43%), Gaps = 45/309 (14%)

Query: 90  AWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLE 149
           ++S  ++G    LL+   P +  A  R   D R+                  ++Y  ++ 
Sbjct: 200 SYSTVIDG----LLKGGDPDKAYATYREMLDRRILPNV--------------VIYSSIIA 241

Query: 150 ILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAV 207
            L K +    A  V   M + G+   P  F+Y  L+  +  +G+L  A+  L  M    V
Sbjct: 242 ALCKGQAMDKAMEVHDRMVKNGVT--PNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGV 299

Query: 208 APNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIK 267
            PN++  ++ +  L    +  +A +  + M   G+ P++ TY+ L+ GY     + +   
Sbjct: 300 EPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHG 359

Query: 268 LIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELV 327
           L D M      PD   + T++    K                       QG+++EA  + 
Sbjct: 360 LFDLMVQSDMQPDHYVFNTLIYASAK-----------------------QGKVDEAMLVF 396

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
           ++M Q G  P+ VTY+ ++NG+C++  ++ A  + Q+M  +G  PN ++Y   L GL   
Sbjct: 397 SKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRT 456

Query: 388 GKSLEAREM 396
           G++  A+E 
Sbjct: 457 GRTATAKEF 465



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 86/167 (51%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y   ++ L K   C  A+++   M +RG++     +S L+  Y+  G L     +  +
Sbjct: 304 VTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDL 363

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M ++ + P+  + NT I+      K+ +A+    +M+  G+ PN +TY+ LI GYC + R
Sbjct: 364 MVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITR 423

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           +++A+ L  EM   G SP+ ++Y  ++  L +  R    ++   +++
Sbjct: 424 MENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQII 470


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 217/422 (51%), Gaps = 20/422 (4%)

Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
           VAP+    NT +  L +  K  +A   +  M      PN +T+   I+ +C    +  A+
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62

Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG-------- 318
           +L+D+MP  GC+PD V Y T++    ++  + +  DL+  M+   N              
Sbjct: 63  QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIA 122

Query: 319 -RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            R E+  EL+ +M + GC P+  T++ +++  C+   +D A ++L+QM  +GC+P+TV+Y
Sbjct: 123 ERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNY 182

Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
              +N L   G+  +A  ++N+   +   P+A+ ++ V+ G  R  +  +A +++ +M +
Sbjct: 183 NIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFR 239

Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
                  +  N+LI  LC+ G ++ A +  ++     C  ++V ++SL+ GF ++G +E 
Sbjct: 240 DDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEV 299

Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
           A+ L   M  CK  PD  +Y  ++  L +  R E+A EL+ +M+ K   P  VT+  +I+
Sbjct: 300 AIQLFRSMP-CK--PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILIN 356

Query: 558 RYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
             CQ G V+  +++LE+M +         YN +I      G L++A K+L  +   + K 
Sbjct: 357 SLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKP 413

Query: 616 DA 617
           DA
Sbjct: 414 DA 415



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 215/435 (49%), Gaps = 24/435 (5%)

Query: 136 RYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGK 191
           R R  P  + +   +    +  L   A ++L  M R G  C P+   +S L+  +S  G 
Sbjct: 35  RNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYG--CTPDVVIYSTLINGFSEQGH 92

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +  A+ +L+ M      PN +  N A+  L +  +       +  M   G +PN  T++ 
Sbjct: 93  VDQALDLLNTM---LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSM 149

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           LI   C  + +  A++++++M   GC PD V+Y  ++  L +  R+ +   L+  MV   
Sbjct: 150 LISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKP 209

Query: 312 NL---------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
           +          F    R  +A EL+ QM +  C    +T+  +++  C+ G ++ A ++ 
Sbjct: 210 DALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVF 269

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
           +QM  + C P+ V+Y++ LNG    G    A ++  +   +   P+  +Y+ V+ GL R 
Sbjct: 270 EQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRA 326

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
            +  +A +++ EMV K   P  V  N+LI SLC++G +D A + +++  N G   ++  +
Sbjct: 327 ARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTY 386

Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
            +LI GF ++G L++AL LL  M  CK  PD ++Y + +  L +  R ++A EL+ +ML 
Sbjct: 387 NALINGFSEQGRLDDALKLLSTMS-CK--PDAISYNSTLKGLCRAERWQDAEELVAEMLR 443

Query: 543 KGLVPTVVTYRTVIH 557
               P  VT++   H
Sbjct: 444 NKCTPNEVTFKYANH 458



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 171/351 (48%), Gaps = 38/351 (10%)

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
           C P+ VT+   +  FC+ G LD+A ++L QM  +GC P+ V Y+  +NG    G   +A 
Sbjct: 38  CPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQAL 97

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +++NT       PN + Y+  + GL    +  +  +++ EMV+KG  P     ++LI SL
Sbjct: 98  DLLNTM---LCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSL 154

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP-- 512
           C+   +D A + +++    GC  + VN+  +I    ++G +++AL LL+ M +CK D   
Sbjct: 155 CQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSM-VCKPDALG 213

Query: 513 -------------------------------DTVTYTTIIDALSKNGRVEEATELMMKML 541
                                            +T+  +ID L +NG V  AT++  +M 
Sbjct: 214 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMP 273

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEA 601
                P +VTY ++++ + + G VE  ++L   M  K     +YN V++ LC     E+A
Sbjct: 274 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDI-FSYNAVLKGLCRAARWEDA 332

Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           G+++ +++      +  T ++L+ S   KG+   A +V  +M N    PD+
Sbjct: 333 GELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDI 383



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 5/192 (2%)

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
           P     N +++ LC   K + A++ M E +   C  N V F + IR FCQ G L+ A+ L
Sbjct: 5   PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 64

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
           LD M      PD V Y+T+I+  S+ G V++A +L+  ML K   P  V Y   +   C 
Sbjct: 65  LDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGLCI 121

Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
             R ED+ +L+ +M+ K        ++ +I +LC    ++ A ++L ++ +   + D   
Sbjct: 122 AERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVN 181

Query: 620 CHVLVESYLNKG 631
            ++++ S   +G
Sbjct: 182 YNIIINSLSERG 193


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 203/426 (47%), Gaps = 35/426 (8%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           G  R A+ VL  MQ+  V P+    ++AI       +  +A+  L  M   G  P+VLTY
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           +  I     + R K+A+ L+  M  +G  P+ + Y   +   C++               
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAIS-ACRKG-------------- 269

Query: 310 DSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
                   G+ E A +L+ +M  +G  PDV+TY+ V++   + G+ + A ++L +M   G
Sbjct: 270 --------GQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKG 321

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
              N ++Y+  +      G+  EA  ++   +E    P+ ITYS  +    ++G+  EA 
Sbjct: 322 VVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAV 381

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF 489
            ++REM  +G  P  +   ++I +  + G+   A   +QE    G   +V+N+++ I   
Sbjct: 382 GLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDAC 441

Query: 490 CQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
            Q    E+AL LL +M      P+ ++Y + IDA +K GR + A EL+ +M + GL P V
Sbjct: 442 AQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDV 501

Query: 550 VTYRTVIHRYCQVGR-VEDLLKLLEKMLSKQ------KCRTAYNQVIENLCSFGYLEEAG 602
           +TY  VI   C +GR  E+ L L  +M  +        C TA N   +     G+ EEA 
Sbjct: 502 ITYSAVIAS-CAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQG----GWWEEAL 556

Query: 603 KILGKV 608
            +LG++
Sbjct: 557 DVLGEM 562



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 205/432 (47%), Gaps = 23/432 (5%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
           Y   +      +  + A  +L  MA RG       +S  + A ++  + + A+ +L  M+
Sbjct: 189 YSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMK 248

Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
              V PN+++ + AI     G +   A+  L+ M   G+ P+V+TY+ +I       + +
Sbjct: 249 GQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWE 308

Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
            A +L+ EMP KG   + ++Y  V+G   K                        G+ EEA
Sbjct: 309 PAFRLLMEMPTKGVVANIITYSIVIGACAK-----------------------WGQWEEA 345

Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
             L+ +M + G  PDV+TY++ ++   + G+ ++A  +L++M   G  PN +SY   ++ 
Sbjct: 346 VALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISA 405

Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
               G+  EA +++   +     P+ I YS  +    +  +  +A  ++REM   G  P 
Sbjct: 406 CAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPN 465

Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
            +  N  I +  + G+   A + ++E    G A +V+ ++++I         EEAL L  
Sbjct: 466 VISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFR 525

Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
           +M      PD V+  T I+A ++ G  EEA +++ +M + GLVP  ++YRT I    +  
Sbjct: 526 EMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGD 585

Query: 564 RVEDLLKLLEKM 575
           R ++++ LL +M
Sbjct: 586 RWKEIIDLLREM 597



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 213/449 (47%), Gaps = 14/449 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D + Y   +   +K    + A  +LR M  +G++     +S  + A  + G+   A+ +L
Sbjct: 220 DVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLL 279

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M    +AP+++  +T I       +   A R L  M   G+  N++TY+ +I      
Sbjct: 280 KEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKW 339

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM----VNDSNLFH 315
            + ++A+ L+ EM   G +PD ++Y + +    K+ + +E   L+ +M    V  + + +
Sbjct: 340 GQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISY 399

Query: 316 D--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
                    +GR  EA +L+ +M   G  PDV+ Y+A ++   +    +QA  +L++M  
Sbjct: 400 GIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPA 459

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  PN +SY + ++     G+S  A E++         P+ ITYS V+       +  E
Sbjct: 460 TGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEE 519

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A D+ REM ++G  P  V  N  I +  + G  + A   + E    G   + +++ + I 
Sbjct: 520 ALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAID 579

Query: 488 GFCQKGD-LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
             C KGD  +E + LL +M      PD ++Y   + A S +G  +EA  L+  ML+ GL 
Sbjct: 580 A-CAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLS 638

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           P VVTY + I+   + GR ++   LL +M
Sbjct: 639 PDVVTYNSAINACAKGGRWKEATVLLRQM 667



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 203/444 (45%), Gaps = 14/444 (3%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  +++  +K    + A R+L  M  +G+      +S ++ A ++ G+   A+ +L
Sbjct: 290 DVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALL 349

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             MQ+  VAP+++  ++ I       +  +A+  L  M + G+TPN ++Y  +I      
Sbjct: 350 REMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKR 409

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--------VNDS 311
            R ++AI L+ EM   G  PD ++Y   +    +  R ++   L+ +M        V   
Sbjct: 410 GRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISY 469

Query: 312 NLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG-ELDQAKKMLQQMY 366
           N   D     GR + A EL+ +M   G  PDV+TY+AV+   C +G + ++A  + ++M 
Sbjct: 470 NSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVI-ASCAMGRQWEEALDLFREMQ 528

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  P+ VS    +N     G   EA +++         P+AI+Y   +    +  +  
Sbjct: 529 RQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWK 588

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           E  D++REM   G  P  +     + +   +G    A   +++ L  G + +VV + S I
Sbjct: 589 EIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAI 648

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
               + G  +EA  LL  M      PD  ++   IDA     +   A E++ +M + G+ 
Sbjct: 649 NACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVS 708

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLK 570
           P   TY T ++   + G  +D ++
Sbjct: 709 PNEATYLTAMYACKRCGEKDDWMQ 732



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 2/214 (0%)

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
           ++ G   +A DV+  M ++G  P     +  I +     + + A + +     +G   +V
Sbjct: 162 KQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDV 221

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
           + ++S I    +    +EA+ LL  M      P+ + Y+  I A  K G+ E A +L+ +
Sbjct: 222 LTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKE 281

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGY 597
           M + GL P V+TY TVI    + G+ E   +LL +M +K        Y+ VI     +G 
Sbjct: 282 MPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQ 341

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
            EEA  +L ++       D  T    + +   KG
Sbjct: 342 WEEAVALLREMQENGVAPDVITYSSTISACAKKG 375


>gi|15223266|ref|NP_172337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75262899|sp|Q9FRS4.1|PPR22_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08610
 gi|9802579|gb|AAF99781.1|AC003981_31 F22O13.9 [Arabidopsis thaliana]
 gi|332190196|gb|AEE28317.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 219/427 (51%), Gaps = 16/427 (3%)

Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
           GKL +A  ++ +M +    P+   C+  +  L   ++L KA+  L  M ++G  P+ +TY
Sbjct: 118 GKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITY 177

Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM----GYLCKEKRIKEVRDLME 305
           N +I   C    I+ A+ L+++M L G  PD ++Y TV+     Y   E+ I+  +D ++
Sbjct: 178 NMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQ 237

Query: 306 K-----MVNDSNLFHDQGRI---EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                 M+  + L     R      A E++  M+  GC PD+VTY ++VN  CR G L++
Sbjct: 238 NGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEE 297

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
              ++Q +  HG + NTV+Y   L+ LC +    E  E++N   +  + P  ITY+++++
Sbjct: 298 VASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILIN 357

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
           GL +   LS A D   +M+++   P  V  N ++ ++ +EG +D A + +    N  C  
Sbjct: 358 GLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPP 417

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
            ++ + S+I G  +KG +++AL L   M      PD +T  ++I    +   VEEA +++
Sbjct: 418 GLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVL 477

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCS 594
            +  ++G      TYR VI   C+   +E  ++++E ML+   C+   T Y  +++ +  
Sbjct: 478 KETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTG-GCKPDETIYTAIVKGVEE 536

Query: 595 FGYLEEA 601
            G   EA
Sbjct: 537 MGMGSEA 543



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 189/385 (49%), Gaps = 16/385 (4%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
           +LR+M   G    P+  +Y M+  +  + G +R A+ +L  M  +   P+++  NT I  
Sbjct: 161 ILRVMVMSG--GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRC 218

Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
           +       +A+RF +     G  P ++TY  L++  C       AI+++++M ++GC PD
Sbjct: 219 MFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPD 278

Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNLFHDQGRIE---EAKELVN 328
            V+Y +++ Y C+   ++EV  +++ +         V  + L H     E   E +E++N
Sbjct: 279 IVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILN 338

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
            M Q    P V+TY  ++NG C+   L +A     QM    C P+ V+Y   L  +   G
Sbjct: 339 IMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEG 398

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
              +A E++   +     P  ITY+ V+ GL ++G + +A ++  +M+  G FP  +   
Sbjct: 399 MVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRR 458

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            LI   CR   ++ A + ++E  N+G  +    +  +I+G C+K ++E A+ +++ M   
Sbjct: 459 SLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTG 518

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEA 533
              PD   YT I+  + + G   EA
Sbjct: 519 GCKPDETIYTAIVKGVEEMGMGSEA 543



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 206/432 (47%), Gaps = 14/432 (3%)

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
           N  +H L    KL  A + +E M      P+  + + L++G   + ++  A+ ++  M +
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSN------------LFHDQGRIEE 322
            G  PD ++Y  ++G LCK+  I+    L+E M    +               D G  E+
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227

Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
           A        Q GC P ++TYT +V   CR     +A ++L+ M   GC P+ V+Y + +N
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287

Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
             C  G   E   +I          N +TY+ ++H L       E  +++  M +  + P
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347

Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
           T +  N+LI  LC+   +  A  F  + L + C  ++V + +++    ++G +++A+ LL
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL 407

Query: 503 DDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
             +      P  +TY ++ID L+K G +++A EL  +ML  G+ P  +T R++I+ +C+ 
Sbjct: 408 GLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRA 467

Query: 563 GRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTC 620
             VE+  ++L++  ++      + Y  VI+ LC    +E A +++  +L    K D +  
Sbjct: 468 NLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIY 527

Query: 621 HVLVESYLNKGI 632
             +V+     G+
Sbjct: 528 TAIVKGVEEMGM 539



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 167/338 (49%), Gaps = 4/338 (1%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
            G++ +A +LV  M++   +P   + + +V G  R+ +LD+A  +L+ M   G  P+T++
Sbjct: 117 NGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTIT 176

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           Y   +  LC  G    A  ++         P+ ITY+ V+  +   G   +A    ++ +
Sbjct: 177 YNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQL 236

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           + G  P  +   +L++ +CR      A + +++   +GC  ++V + SL+   C++G+LE
Sbjct: 237 QNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLE 296

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           E  S++  +     + +TVTY T++ +L  +   +E  E++  M      PTV+TY  +I
Sbjct: 297 EVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILI 356

Query: 557 HRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
           +  C+   +   +    +ML +QKC      YN V+  +   G +++A ++LG +  T  
Sbjct: 357 NGLCKARLLSRAIDFFYQML-EQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCC 415

Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
                T + +++    KG+   A ++  +M +  + PD
Sbjct: 416 PPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 174/395 (44%), Gaps = 13/395 (3%)

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV-------TYTAVVNGF 349
           I  V D  E+    S+ FH  G     +  V  M Q G   D         T   +++  
Sbjct: 59  IDNVNDHAER----SSEFHHYGVGTNLRARVKPMKQFGLSSDGPITENDEETNNEILHNL 114

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
           C  G+L  A K+++ M  H   P+  S +  + GL    +  +A  ++         P+ 
Sbjct: 115 CSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDT 174

Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
           ITY++++  L ++G +  A  ++ +M   G  P  +  N +I+ +   G  + A +F ++
Sbjct: 175 ITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKD 234

Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
            L  GC   ++ +T L+   C+      A+ +L+DM +    PD VTY ++++   + G 
Sbjct: 235 QLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGN 294

Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQ 587
           +EE   ++  +LS GL    VTY T++H  C     +++ ++L  M     C T   YN 
Sbjct: 295 LEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNI 354

Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
           +I  LC    L  A     ++L      D  T + ++ +   +G+   A ++   + N  
Sbjct: 355 LINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTC 414

Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
             P L     V + L  +G  ++A  L  + ++ G
Sbjct: 415 CPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAG 449


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 247/538 (45%), Gaps = 13/538 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +LR M   G       F+ ++ A  + G +  A+ +   M     + NL +  + + 
Sbjct: 212 ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMK 271

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
              +   L  AL  +  +  +G+ PN +TY+ LI G C    I+ A +   EM  KG   
Sbjct: 272 GYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRS 331

Query: 280 DKVSYYTVM-GYL-CK--EKRIKEVRDLMEKMVNDSNLFHD-------QGRIEEAKELVN 328
              S  +++ GYL C+  +       D +E  + +   F+        +G++ EA  L +
Sbjct: 332 SVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWD 391

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           ++   G  P+VV+Y  ++ G CR   ++ A K+ ++M  +G  PN V++T  ++G    G
Sbjct: 392 EVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG 451

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
               A  + +  ++    P   T  +++ GL + G+  E  D+  + V +GF PT +  N
Sbjct: 452 DIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYN 511

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            +I    +EG ++ A    +E    G   + V +TSLI GFC+  +++ AL LL+DM   
Sbjct: 512 TIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK 571

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
               D   Y T+ID   K   ++ A EL+ ++   GL P    Y ++I  +  +  VE+ 
Sbjct: 572 GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEA 631

Query: 569 LKLLEKMLSKQ-KCR-TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           + L +KM+++   C    Y  +I+ L   G L  A  I  ++L      D     VL+  
Sbjct: 632 IDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING 691

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
             NKG    A K+   M  +N+IP + +   +      EG  +EA  L    ++RG +
Sbjct: 692 LCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLV 749



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 205/465 (44%), Gaps = 48/465 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y ++++   K    + A      M  +GI     + + ++  Y +    +NA  + 
Sbjct: 297 NKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMF 356

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           +   ++ +A N+   NT +  L    K+ +A    + +   GI+PNV++YN +I G+C  
Sbjct: 357 NDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRK 415

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GY---------------------------- 290
             I  A K+  EM   G +P+ V++  +M GY                            
Sbjct: 416 DNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTL 475

Query: 291 ------LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
                 LCK  R  E RDL  K V+              + F  +G I  A  +  +M +
Sbjct: 476 GIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCE 535

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           +G  P  VTYT++++GFC+   +D A K+L  M   G K +  +Y   ++G C       
Sbjct: 536 VGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKS 595

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A E++N       +PN   Y+ ++ G +    + EA D+ ++MV +G          LI 
Sbjct: 596 AHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLID 655

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            L + G++  A     E L+KG   +    T LI G C KG  E A  +L+DM      P
Sbjct: 656 GLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIP 715

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
             + Y T+I    K G ++EA  L  +ML +GLVP  +TY  +++
Sbjct: 716 SVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 760



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 167/372 (44%), Gaps = 35/372 (9%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
             A +V + M   G       F+ LM  Y + G + NA  +   M+ A + P     +T 
Sbjct: 419 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPT----DTT 474

Query: 218 IHVLVVGNKLAKALRFLERMQL------AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
           + +++ G  L KA R  E   L       G  P  + YN +I G+     I  A  +  E
Sbjct: 475 LGIIIKG--LCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYRE 532

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMS 331
           M   G +P  V+Y +++   CK   I    DL  K++ND                   M 
Sbjct: 533 MCEVGITPSTVTYTSLIDGFCKGNNI----DLALKLLND-------------------MK 569

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
           + G   D+  Y  +++GFC+  ++  A ++L ++   G  PN   Y + + G  +     
Sbjct: 570 RKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 629

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           EA ++      E    +  TY+ ++ GL + G+L  A D+  EM+ KG  P      +LI
Sbjct: 630 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLI 689

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LC +G+ + A+K +++   K    +V+ + +LI G  ++G+L+EA  L D+M      
Sbjct: 690 NGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLV 749

Query: 512 PDTVTYTTIIDA 523
           PD +TY  +++ 
Sbjct: 750 PDNITYDILVNG 761



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 147/334 (44%), Gaps = 3/334 (0%)

Query: 353 GELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
           G + +A++   Q    G + +  +Y+ F++ LC    S  A  ++       W P   T+
Sbjct: 172 GNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTF 231

Query: 413 SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLN 472
           + V+    +EG ++EA  +  +MV  G          L++  C +G +  A   + E   
Sbjct: 232 TSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISE 291

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            G   N V ++ LI G C+ G++E+A     +M          +  +I++   K    + 
Sbjct: 292 SGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQN 351

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIE 590
           A  +    L  GL   V T+ T++   C+ G++ +   L +++++K       +YN +I 
Sbjct: 352 AFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIIL 410

Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
             C    +  A K+  ++L      +A T  +L++ Y  KG    A+ +  RM + N++P
Sbjct: 411 GHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILP 470

Query: 651 DLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
                  + + L   G+S E   L  +FV +G +
Sbjct: 471 TDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFV 504



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 112/242 (46%), Gaps = 23/242 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++   K      A ++L  M R+G++   +A+  L+  + +   +++A  +L+ 
Sbjct: 543 VTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNE 602

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           ++ A ++PN  I N+ I      N + +A+   ++M   GI  ++ TY  LI G     R
Sbjct: 603 LRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGR 662

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +  A  +  EM  KG  PD  ++  ++  LC                       ++G+ E
Sbjct: 663 LLYASDIHTEMLSKGILPDDRAHTVLINGLC-----------------------NKGQFE 699

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A++++  M+    IP V+ Y  ++ G  + G L +A ++  +M   G  P+ ++Y   +
Sbjct: 700 NARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 759

Query: 382 NG 383
           NG
Sbjct: 760 NG 761



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 10/236 (4%)

Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
           +EG +  A++   +   +G  ++   ++  +   C K +   ALSLL +M      P   
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229

Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
           T+T++I A  K G V EA  L   M++ G    +    +++  YC  G +   L L+ ++
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289

Query: 576 LSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
                   +  Y+ +I+  C  G +E+A +   ++     ++   + + ++E YL     
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL----K 345

Query: 634 LLAYKVACRMFNRNL---IPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
             +++ A  MFN  L   + ++     +   L  EGK  EA  L    + +G I P
Sbjct: 346 CQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKG-ISP 400


>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 861

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/531 (25%), Positives = 239/531 (45%), Gaps = 23/531 (4%)

Query: 78  VREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRY 137
           + E+C +   +  W   L  +  +   S  P+   + L+ Q +  ++L+F +W      +
Sbjct: 35  LNEICTITRSKPRWENTLISQYPSFNFS-NPKFFLSYLKHQNNTFLSLRFLHWLTSHCGF 93

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D      + + L      + AK +L            E +  L+      G +     
Sbjct: 94  KPDQSSCNALFDALVDAGAVKAAKSLLEYPDFVPKNDSLEGYVRLL---GENGMVEEVFD 150

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPN--VLTYNCLIKG 255
           V   ++K    P+    N  +   +   +     +  E M  +G+  N  V T  CLIK 
Sbjct: 151 VFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVETVGCLIKA 210

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEK---RIKEVRDLMEKMVNDSN 312
           +C  +++ +  +L+ ++  KG   D   +  ++   CK+K   R+ E+  +M  M  + +
Sbjct: 211 FCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPS 270

Query: 313 LFHDQGRI---------EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
           ++  Q  I         +EA  + N +   G  PD V YT V+ GFC +G L +A+K+  
Sbjct: 271 IYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWF 330

Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
           +M   G  PN  +Y   + G C      EAR++ +      +  N ++YS ++ GL   G
Sbjct: 331 EMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHG 390

Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
           K  EA  +  EM +KG     +  N LI+ LC+EG++  A   + + L +G   +V +FT
Sbjct: 391 KTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFT 450

Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
            LI+  C+ GD E A+ LL DM+    +P   T+  +I  LSK G   +  E ++KMLS 
Sbjct: 451 PLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSW 510

Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCS 594
            L P + T+  +I    +  R++D+L +L+ M      R  Y      +CS
Sbjct: 511 KLKPNMQTFEHLIDCLKRENRLDDILIVLDLMF-----REGYRLEKSRICS 556



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 200/447 (44%), Gaps = 22/447 (4%)

Query: 225 NKLAKALRFLERM-QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
           N    +LRFL  +    G  P+  + N L     D   +K A  L+ E P      D + 
Sbjct: 75  NNTFLSLRFLHWLTSHCGFKPDQSSCNALFDALVDAGAVKAAKSLL-EYPDFVPKNDSLE 133

Query: 284 YYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFH-------DQGRIEEAKELVNQM- 330
            Y  +  L +   ++EV D+   +     +  ++ F+         GR +   +L   M 
Sbjct: 134 GYVRL--LGENGMVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMI 191

Query: 331 -SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG-CKPNTVSYTAFLNGLCHNG 388
            S +G   DV T   ++  FC   ++    ++L+Q+   G C  NTV + A +NG C   
Sbjct: 192 ESGVGVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTV-FNALINGFCKQK 250

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
           +     E+++        P+  TY  +++GL +  K  EA  V  ++  +G+FP  V   
Sbjct: 251 QYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYT 310

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            +I+  C  G +  A+K   E + KG   N   +  +I G+C+  D  EA  L DDM   
Sbjct: 311 TVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGR 370

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
               + V+Y+T+I  L  +G+ +EA  L  +M  KG+   +++Y ++I   CQ G +   
Sbjct: 371 GYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKA 430

Query: 569 LKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
             LL K+L +  +   +++  +I+ LC  G  E A ++L  +     +  AST   ++  
Sbjct: 431 TNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIG 490

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLK 653
              KG      +   +M +  L P+++
Sbjct: 491 LSKKGDFAQGMEWLLKMLSWKLKPNMQ 517



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 158/342 (46%), Gaps = 12/342 (3%)

Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
           +LR +  +G+      F+ L+  + +  +      +L +M      P++      I+ L+
Sbjct: 223 LLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLL 282

Query: 223 VGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKV 282
              K  +A R    ++  G  P+ + Y  +IKG+CD+  + +A KL  EM  KG  P++ 
Sbjct: 283 KRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEY 342

Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKM---------VNDSNL---FHDQGRIEEAKELVNQM 330
           +Y  ++   CK +   E R L + M         V+ S +    +  G+ +EA  L ++M
Sbjct: 343 TYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEM 402

Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
           S+ G   D+++Y +++ G C+ GEL +A  +L ++   G +P+  S+T  +  LC  G +
Sbjct: 403 SRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDT 462

Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
             A  ++    +    P A T+  ++ GL ++G  ++  + + +M+     P       L
Sbjct: 463 EGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHL 522

Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
           I  L RE ++D     +     +G  +      SL+  F +K
Sbjct: 523 IDCLKRENRLDDILIVLDLMFREGYRLEKSRICSLVTKFSKK 564


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 234/516 (45%), Gaps = 21/516 (4%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQG--AKRVLRLMARRGIECRPE--AFSYLMVAYSRAGK 191
           ++R +P VY   + I +     Q   A  +L LM   G  C+P    F  ++ A+ + G 
Sbjct: 316 KFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENG--CKPSIATFCTIIDAFCKEGN 373

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +  A      ++   ++ N ++ N  I   V    +++A    E M+   I P+ +T+N 
Sbjct: 374 VELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNT 433

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           L+ G+    + +D  +L+ ++ + G   D       +  LC   R  E   L+E ++   
Sbjct: 434 LVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKG 493

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                         + + G  E A      M + G  P   T ++++    R G LD+A 
Sbjct: 494 IPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAW 553

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
             L  M   G     +++T  L+G    G    A  + N  +     P+A+ ++  ++GL
Sbjct: 554 IALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGL 613

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
              G +++A DV  +M++KGF P     N LI   C+ GK++ A K ++E   +G   ++
Sbjct: 614 CISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDI 673

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
                +I G C++G ++ A+    DM      PD VTY T+ID   K   V  A +LMMK
Sbjct: 674 FTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMK 733

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGY 597
           M   G  P + TY   IH YC V ++   + +LE+++S         YN +I  +C+   
Sbjct: 734 MSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNV-I 792

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           L+ A  +  K+L+ A   +  T +VL+  +  +G+P
Sbjct: 793 LDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMP 828



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 113/498 (22%), Positives = 206/498 (41%), Gaps = 41/498 (8%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           LM A+ ++     A+ +LS M++  V PN    +    +L+         +    +   G
Sbjct: 224 LMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKG 283

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             PN  T+N LI  +C     +    L+  M    C PD  SY  V+   C         
Sbjct: 284 PCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCL-------- 335

Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
                          +G+   A  L+N M + GC P + T+  +++ FC+ G ++ A+K 
Sbjct: 336 ---------------KGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKY 380

Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
             ++   G   NT+ Y   ++G        +A  +      +   P+ IT++ ++ G  R
Sbjct: 381 FDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYR 440

Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
            GK  +   ++R++   G        ++ +  LC  G+ D A K ++  L KG   +VV 
Sbjct: 441 YGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVA 500

Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
           F S+I  +   G  E A      M      P + T ++++ +L + G ++EA   +  M+
Sbjct: 501 FNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMI 560

Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR------TAYNQVIENLCSF 595
            KG   T + +  ++  Y ++G V     + E + ++ K R       A+   I  LC  
Sbjct: 561 DKGFPVTNMAFTVLLDGYFRIGAV----NMAESLWNEMKGRGVFPDAVAFAAFINGLCIS 616

Query: 596 GYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL--- 652
           G + +A  +   +LR     +    + L+  +   G    A K+   M  R L+PD+   
Sbjct: 617 GLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTV 676

Query: 653 -----KLCKKVSERLILE 665
                 LCK+   +L +E
Sbjct: 677 NMIICGLCKQGRMKLAIE 694



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 159/352 (45%), Gaps = 13/352 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A ++L  +  +GI     AF+ ++ AY  AG    A Y   +M K  + P+   C++ + 
Sbjct: 482 AMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLI 541

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            LV    L +A   L  M   G     + +  L+ GY  +  +  A  L +EM  +G  P
Sbjct: 542 SLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFP 601

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVN----DSNLFHDQ--------GRIEEAKELV 327
           D V++   +  LC    + +  D+   M+      +N  ++         G++ EA +LV
Sbjct: 602 DAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLV 661

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M++ G +PD+ T   ++ G C+ G +  A +    M   G  P+ V+Y   ++G C  
Sbjct: 662 REMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKA 721

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
                A +++    +  W P+  TY++ +HG     K++ A  ++ E++  G  P  V  
Sbjct: 722 FDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTY 781

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           N +I ++C    +D A     + L      N V    L+  FC++G  E+A+
Sbjct: 782 NTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAI 832


>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 719

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 145/657 (22%), Positives = 280/657 (42%), Gaps = 56/657 (8%)

Query: 36  EGEDGSDSDDHFMVLDSFDKYRVNREEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKL 95
           E   G +SD H+++   F     N  +I    +  +++  P+       I  R  W   L
Sbjct: 43  EASLGGNSDTHYLLNPQFT--NPNSLKISNNPISANKYSKPIDHHYFSRILSRHDWFLLL 100

Query: 96  EGELRNLLRSLKPRQICAVLRSQADERVALQFFYWA---------DRQWR-------YRH 139
             E +    +L    + +VL++Q +    L+F+ W          D+  +       YR 
Sbjct: 101 NHEFKAKRITLNSHSVASVLQNQENPLYPLKFYIWVSNMDPLFAKDQSVKGVLANCLYRK 160

Query: 140 DPIVYYMMLEILSKTK----------------------LCQGAKRVLRLMARRGIECRPE 177
            P+V  + +E+L   K                      L +    +   ++  GI     
Sbjct: 161 GPVV--LSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTR 218

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
            ++ ++ A  ++  L  A      M      P+    N  IH +     + +ALR +++M
Sbjct: 219 LYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQM 278

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY----YTVMGYLCK 293
           +  G +PNV TY  LI G+ +  ++ +A ++++ M  +  SP + +     + V   +  
Sbjct: 279 EGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAP 338

Query: 294 EKRIK------EVRDLMEKMVNDSNL--FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
            K  +      E   +++++  D+ L     +    EA  L+ +  ++G  PD  T+   
Sbjct: 339 NKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIA 398

Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
           +N   +  +L++   +L +    G K    +Y A +  L   GK  E     N   ++  
Sbjct: 399 MNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGL 458

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
             N  +Y++V+    +   + +A +  +EM  KG  P  V  N LI   C+ G++  ++ 
Sbjct: 459 LCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRD 518

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
            +   L  G   ++  F+S+I G C+   +E+AL    +M +    P+ VTY  +I +L 
Sbjct: 519 LLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLC 578

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY 585
             G V  + +L+ KM + G+ P V ++  +I  +C++G+VED  KL   MLS       Y
Sbjct: 579 IIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNY 638

Query: 586 NQV--IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVA 640
             V  I+  C  G   EA ++   +       D+ TC++++++ + +     A K+A
Sbjct: 639 TYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIA 695



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 142/317 (44%), Gaps = 23/317 (7%)

Query: 162 RVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVL 221
            +L     +G++     +  L+ A   AGK+    +  + M K  +  N+   N  I   
Sbjct: 413 NILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCF 472

Query: 222 VVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
              + + KA    + MQ  GI PN++T+N LI GYC    I  +  L+  +   G  PD 
Sbjct: 473 CKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDI 532

Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
            ++ +++  LC+ K+I                       E+A    ++M   G  P+ VT
Sbjct: 533 FTFSSIIDGLCRAKQI-----------------------EDALGCFSEMVMWGLSPNAVT 569

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
           Y  +++  C +G++ ++ K+L++M   G  P+  S+ A +   C  GK  +A+++ ++  
Sbjct: 570 YNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSML 629

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
                P+  TY   +    + G+ +EA ++   M   G  P     N+++ +L ++ + +
Sbjct: 630 SLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFE 689

Query: 462 GAKKFMQECLNKGCAVN 478
            A+K  + C   G  VN
Sbjct: 690 AAQKIAKTCSEWGILVN 706



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 110/469 (23%), Positives = 179/469 (38%), Gaps = 86/469 (18%)

Query: 313 LFHDQGRIEEAK---ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L    GR+  AK   E+  Q+S +G  P    Y AV++   +   LD A    QQM    
Sbjct: 188 LIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADN 247

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
           CKP+  +Y   ++G+C +G   EA  ++   E   ++PN  TY++++ G     K+ EA 
Sbjct: 248 CKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAF 307

Query: 430 DVVREMVKKGFFPTPVEINLLIQSLCR--------------------------------- 456
            V+  M  +   P+   I   I  + R                                 
Sbjct: 308 RVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCL 367

Query: 457 ----EGKMDGA--KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
                 +  GA  KKF +       A   +    LI+GF    DL E  ++LD       
Sbjct: 368 SSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGF----DLNEVCNILDRFVEQGM 423

Query: 511 DPDTVTYTTIIDALSKNGRVEE-----------------------------------ATE 535
                TY  +I AL   G+V E                                   AT 
Sbjct: 424 KFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATN 483

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRV---EDLLKLLEKMLSKQKCRTAYNQVIENL 592
              +M  KG+ P +VT+ T+I  YC+ G +    DLL +L +   K    T ++ +I+ L
Sbjct: 484 TFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFT-FSSIIDGL 542

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
           C    +E+A     +++      +A T ++L+ S    G    + K+  +M    + PD+
Sbjct: 543 CRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDV 602

Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVFLNS 701
                + +     GK E+A  L    +  G I P +  ++   +VF  S
Sbjct: 603 FSFNALIQSFCRMGKVEDAKKLFSSMLSLGLI-PDNYTYVAFIKVFCQS 650


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 233/482 (48%), Gaps = 22/482 (4%)

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    VAP++  CN  + VL    +          M   GI P+++TYN L+  +    R
Sbjct: 187 MASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGR 246

Query: 262 IKDAIK-LIDEMPLKG--CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---VNDSNLFH 315
            KD I  L+ EM  +G  C P+ V+Y  V+  L ++  ++E  +L+E+M      S+  +
Sbjct: 247 -KDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSFTY 305

Query: 316 D--------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
           +        +G +++  +L  +M   G +P VVTY A+++G  + G+++ A+    +M  
Sbjct: 306 NPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRA 365

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
            G  P+ ++Y + LNG C  G   EA  +          P  +TY++++ G  R G L E
Sbjct: 366 MGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEE 425

Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
           A  +  EMV++G  P      +L++       +   ++F  E L+KG   +   + + I 
Sbjct: 426 ARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRIC 485

Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
                GD+ ++  L + + L     DTVTY  +ID L K G +++A ELMM+M+S GL P
Sbjct: 486 AEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQP 545

Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKIL 605
             +TY  +IH +C+ G + +  K    M+S     +A  Y  +I   C  G L  A    
Sbjct: 546 DCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWF 605

Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
            K+L    + +  T +VL+ +    G   LAY+    M  R L+P+     K +  L+++
Sbjct: 606 RKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPN-----KYTYTLLID 660

Query: 666 GK 667
           GK
Sbjct: 661 GK 662



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 166/334 (49%), Gaps = 12/334 (3%)

Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
           M   GI      ++ ++    ++G++  A      M+   + P+++  N+ ++       
Sbjct: 328 MENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGN 387

Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
             +AL     ++ AG+ P VLTYN LI GYC L  +++A +L +EM  +GC PD  +Y  
Sbjct: 388 QKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTI 447

Query: 287 VMGYLCKEKRIKEVRDLMEKMVN-----DSNLFHDQ-------GRIEEAKELVNQMSQMG 334
           +M        +   R+  ++M++     D   ++ +       G I ++ +L   +   G
Sbjct: 448 LMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEG 507

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
              D VTY  +++G C+ G L  A++++ QM  +G +P+ ++YT  ++  C  G   EAR
Sbjct: 508 ISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREAR 567

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           +  N    +   P+A+TY+V++H   R G L  A    R+M+++G  P  +  N+LI +L
Sbjct: 568 KFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 627

Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
           CR G+   A +   E L +G   N   +T LI G
Sbjct: 628 CRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 27/261 (10%)

Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
           A+R+   M  +G  C P+ ++Y  LM        L         M    + P+    NT 
Sbjct: 426 ARRLKEEMVEQG--CLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTR 483

Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
           I   +    ++K+ +  E + L GI+ + +TYN LI G C    +KDA +L+ +M   G 
Sbjct: 484 ICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGL 543

Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
            PD ++Y  ++   C+   ++E R     M++D                       G  P
Sbjct: 544 QPDCITYTCLIHAHCERGFLREARKFFNDMISD-----------------------GLPP 580

Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
             VTYT +++ +CR G L  A    ++M   G +PN ++Y   ++ LC  G++  A    
Sbjct: 581 SAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHF 640

Query: 398 NTSEEEWWTPNAITYSVVMHG 418
               E    PN  TY++++ G
Sbjct: 641 YEMLERGLVPNKYTYTLLIDG 661



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 4/147 (2%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
           D + Y ++++ L KT   + A+ ++  M   G++  P+  +Y  L+ A+   G LR A  
Sbjct: 511 DTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQ--PDCITYTCLIHAHCERGFLREARK 568

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
             + M    + P+ +     IH       L  A  +  +M   G+ PN +TYN LI   C
Sbjct: 569 FFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 628

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            + R + A +   EM  +G  P+K +Y
Sbjct: 629 RMGRTQLAYRHFYEMLERGLVPNKYTY 655



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 4/223 (1%)

Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
            +E  + G A +V +   ++R        ++  ++  +M     +P  VTY T++D+ SK
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243

Query: 527 NGRVEEATELMMKMLSKG--LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-LSKQKCRT 583
            GR ++   L+ +M ++G   +P  VTY  VI    + G +E+  +L+E+M LSK+    
Sbjct: 244 EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSF 303

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            YN +I  L + G++++   +  ++          T + ++   L  G    A      M
Sbjct: 304 TYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEM 363

Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
               L+PD+     +       G  +EA  L+   + R  + P
Sbjct: 364 RAMGLLPDVITYNSLLNGYCKAGNQKEA-LLLFGDLRRAGLAP 405



 Score = 43.5 bits (101), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 47/116 (40%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D I Y  ++    +    + A++    M   G+      ++ ++ AY R G L +A    
Sbjct: 546 DCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWF 605

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             M +  V PN +  N  IH L    +   A R    M   G+ PN  TY  LI G
Sbjct: 606 RKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 210/410 (51%), Gaps = 16/410 (3%)

Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
           ++M + GI  N++T + LI  +C L ++  +  L+ ++   G  P+ +++ T+M  LC +
Sbjct: 34  KQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLK 93

Query: 295 KRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTY 342
             +K++    +K+V  +            N     G    A +L+  +      P+VV Y
Sbjct: 94  GEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMY 153

Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
           +A+++G C+   +++A  +  +M      PN ++Y   +   C  G+ + A  +++    
Sbjct: 154 SAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMIL 213

Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
           +   P+  T+S+++  L +EGK   A  +   MV+ G  P     N++I  LC+  ++D 
Sbjct: 214 KNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE 271

Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIID 522
           A   ++E L+K    + V + SLI G C+ G +  AL+L+++M+   +  D VTYT+++D
Sbjct: 272 AMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLD 331

Query: 523 ALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
           AL KN  +++AT L MKM  +G+ PT+ TY  +I   C+ GR+++  +L + +L K  C 
Sbjct: 332 ALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCI 391

Query: 583 T--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
               Y  +I  LC  G  +EA  I  K+       +A T  +++ S   K
Sbjct: 392 DVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEK 441



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 212/440 (48%), Gaps = 27/440 (6%)

Query: 138 RH-DPIV-YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           RH  PI+ +  +L  L K K       + + M  +GIE      S L+  +   G++  +
Sbjct: 5   RHTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFS 64

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
             +L  + K    PN +   T +  L +  ++ K L F +++       N ++Y  L+ G
Sbjct: 65  FSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNG 124

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
            C     + AIKL+  +  +   P+ V Y  ++  LCK+K + E  DL  +M        
Sbjct: 125 LCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEM-------- 176

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
                 +A+E+          P+V+TY  ++  FC  G+L  A  +L +M      P+  
Sbjct: 177 ------DAREI---------FPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVY 221

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +++  ++ LC  GK+  A+++ +   +    PN  +Y+++++GL +  ++ EA +++REM
Sbjct: 222 TFSILIDALCKEGKN--AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREM 279

Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
           + K   P  V  N LI  LC+ G++  A   M E  ++G   +VV +TSL+   C+  +L
Sbjct: 280 LHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNL 339

Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
           ++A +L   M      P   TYT +ID L K GR++ A EL   +L KG    V TY  +
Sbjct: 340 DKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVM 399

Query: 556 IHRYCQVGRVEDLLKLLEKM 575
           I   C+ G  ++ L +  KM
Sbjct: 400 ISGLCKEGMFDEALAIKSKM 419



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 189/369 (51%), Gaps = 25/369 (6%)

Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
           ++  L+    + G+ R A+ +L M++  +  PN+++ +  I  L     + +A      M
Sbjct: 117 SYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEM 176

Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
               I PNV+TYN LI  +C   ++  A  L+ EM LK  +PD  ++  ++  LCKE + 
Sbjct: 177 DAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK- 235

Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
                                    AK++ + M QMG  P+V +Y  ++NG C+   +D+
Sbjct: 236 ------------------------NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE 271

Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
           A  +L++M H    P+TV+Y + ++GLC +G+   A  ++N         + +TY+ ++ 
Sbjct: 272 AMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLD 331

Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
            L +   L +A  +  +M ++G  PT      LI  LC+ G++  A++  Q  L KGC +
Sbjct: 332 ALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCI 391

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +V  +T +I G C++G  +EAL++   M      P+ VT+  II +L +    ++A +L+
Sbjct: 392 DVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLL 451

Query: 538 MKMLSKGLV 546
            +M++KGL+
Sbjct: 452 HEMIAKGLL 460



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 171/352 (48%), Gaps = 18/352 (5%)

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA-GKLRNA 195
           ++ + + Y  +L  L KT   + A ++LR++  R    RP    Y  +       KL N 
Sbjct: 111 FQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRST--RPNVVMYSAIIDGLCKDKLVNE 168

Query: 196 MYVL-SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
            Y L S M    + PN++  NT I    +  +L  A   L  M L  I P+V T++ LI 
Sbjct: 169 AYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILID 228

Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM-----EKMVN 309
             C     K+A ++   M   G +P+  SY  ++  LCK KR+ E  +L+     + MV 
Sbjct: 229 ALCK--EGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVP 286

Query: 310 DSNLFHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
           D+  ++         GRI  A  L+N+M   G   DVVTYT++++  C+   LD+A  + 
Sbjct: 287 DTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALF 346

Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
            +M   G +P   +YTA ++GLC  G+   A+E+      +    +  TY+V++ GL +E
Sbjct: 347 MKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKE 406

Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
           G   EA  +  +M   G  P  V   ++I+SL  + + D A+K + E + KG
Sbjct: 407 GMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 159/362 (43%), Gaps = 36/362 (9%)

Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
            L  QM   G   ++VT + ++N FC +G++  +  +L ++   G  PNT+++T  + GL
Sbjct: 31  SLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGL 90

Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
           C  G+  +     +    + +  N ++Y  +++GL + G+   A  ++R +  +   P  
Sbjct: 91  CLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNV 150

Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
           V  + +I  LC++  ++ A     E   +    NV+ + +LI  FC  G L  A SLL +
Sbjct: 151 VMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHE 210

Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
           M L   +PD  T++ +IDAL K G+   A ++   M+  G+ P V +Y            
Sbjct: 211 MILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSY------------ 256

Query: 565 VEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
                                N +I  LC    ++EA  +L ++L      D  T + L+
Sbjct: 257 ---------------------NIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLI 295

Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
           +     G    A  +   M +R    D+     + + L      ++A  L ++  ERG I
Sbjct: 296 DGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG-I 354

Query: 685 QP 686
           QP
Sbjct: 355 QP 356


>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
 gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
          Length = 321

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 163/316 (51%), Gaps = 23/316 (7%)

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M   G  P V+T+  L+ G C  +R+ DA +L++ M  +GC P+ + +  +M  LCKE  
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKE-- 58

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                                GR  EA   +  M  MG  P +VTY  +++GFC+  +L 
Sbjct: 59  ---------------------GRSAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLH 97

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A ++LQ+M   G +PN V+Y  FL+GLC  GK  +A  +     E+    +   Y+ ++
Sbjct: 98  RALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLI 157

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            GL + GKL+EA  ++ EM   G  P P   N ++  LC+  +++ A K  +     G  
Sbjct: 158 DGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGIL 217

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            + + F  ++ G+C+   +++AL LL  M      P  V Y T+IDAL++ GRV EA  L
Sbjct: 218 PDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRL 277

Query: 537 MMKMLSKGLVPTVVTY 552
           + +M+S+GL P   TY
Sbjct: 278 LQEMISRGLSPNSRTY 293



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 155/292 (53%), Gaps = 2/292 (0%)

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M++ GCIP VVT+  +V+G C+   L  A ++++ M   GC PN + +   ++ LC  G+
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
           S EA   I T      +P  +TY++++ G  +E KL  A ++++EM  +G  P  V  N 
Sbjct: 61  SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
            +  LC+ GK+D A    +    K   ++V  +T+LI G CQ G L EA SLLD+M    
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P    Y  I+  L K  R+ EA +L  +M   G++P  +T+  ++  YC+  R++D L
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDAL 240

Query: 570 KLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            LL++M S         YN +I+ L   G + EA ++L +++      ++ T
Sbjct: 241 LLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRT 292



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 157/314 (50%), Gaps = 27/314 (8%)

Query: 167 MARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           MA +G  C P    F  L+    +A +L +A  ++ +M +    PN L+ N  +  L   
Sbjct: 1   MAEKG--CIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKE 58

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            + A+A  F+E M+  G++P ++TYN LI G+C   ++  A++++ EM  +G  P+ V+Y
Sbjct: 59  GRSAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTY 118

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            T +  LCK                        G++++A  L   M++     DV  YT 
Sbjct: 119 NTFLHGLCK-----------------------YGKVDDALALFRAMTEKKIRLDVYGYTT 155

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++G C+ G+L +A  +L +M + GC P    Y A L+ LC   +  EA ++        
Sbjct: 156 LIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSG 215

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P+ +T+ +++ G  R  ++ +A  ++++M   G  P  V  N LI +L R G++  A 
Sbjct: 216 ILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAY 275

Query: 465 KFMQECLNKGCAVN 478
           + +QE +++G + N
Sbjct: 276 RLLQEMISRGLSPN 289



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 16/288 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRNAMYVL 199
           + + ++++ L K      A  ++ +M  RG  C P A  F+ +M A  + G+   A   +
Sbjct: 11  VTFGILVDGLCKANRLTDAFELVEVMGERG--CFPNALVFNGIMDALCKEGRSAEAYGFI 68

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+   V+P ++  N  I       KL +AL  L+ M   G  PN +TYN  + G C  
Sbjct: 69  ETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKY 128

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            ++ DA+ L   M  K    D   Y T++  LC+  ++ E   L+++M N          
Sbjct: 129 GKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCY 188

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               +      RI EA +L  +M+  G +PD +T+  +V G+CR   +D A  +LQQM  
Sbjct: 189 NAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKS 248

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
            G  P  V Y   ++ L   G+  EA  ++        +PN+ TY+++
Sbjct: 249 AGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 144/295 (48%), Gaps = 9/295 (3%)

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           E+   P  +T+ +++ GL +  +L++A ++V  M ++G FP  +  N ++ +LC+EG+  
Sbjct: 3   EKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSA 62

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A  F++   + G +  +V +  LI GFC++  L  AL +L +M     +P+ VTY T +
Sbjct: 63  EAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFL 122

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-----L 576
             L K G+V++A  L   M  K +   V  Y T+I   CQ G++ +   LL++M     +
Sbjct: 123 HGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCV 182

Query: 577 SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
            K  C   YN ++  LC    + EA K+  ++  +    D  T  ++V  Y        A
Sbjct: 183 PKPGC---YNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDA 239

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
             +  +M +  L P   +   + + L   G+  EA  L+   + RG + P S  +
Sbjct: 240 LLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRG-LSPNSRTY 293



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 2/173 (1%)

Query: 139 HDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           H+P  + Y   L  L K      A  + R M  + I      ++ L+    +AGKL  A 
Sbjct: 111 HEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAY 170

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M+ +   P     N  +  L  G+++ +A +  +RM  +GI P+ LT+  ++ GY
Sbjct: 171 SLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGY 230

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           C  HRI DA+ L+ +M   G +P +V Y T++  L +  R+ E   L+++M++
Sbjct: 231 CRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMIS 283



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 3/168 (1%)

Query: 117 SQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP 176
            + D+ +AL   + A  + + R D   Y  +++ L +      A  +L  M   G   +P
Sbjct: 129 GKVDDALAL---FRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKP 185

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
             ++ ++    +  ++  A  +   M  + + P+ L     +     G+++  AL  L++
Sbjct: 186 GCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQ 245

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           M+ AG+ P  + YN LI       R+ +A +L+ EM  +G SP+  +Y
Sbjct: 246 MKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY 293



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 56/118 (47%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           P  Y  +L  L K      A ++ + M   GI      F  ++  Y R  ++ +A+ +L 
Sbjct: 185 PGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQ 244

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
            M+ A +AP  +I NT I  L    ++++A R L+ M   G++PN  TY  + K   D
Sbjct: 245 QMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALMRKQQTD 302


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 247/538 (45%), Gaps = 13/538 (2%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A  +LR M   G       F+ ++ A  + G +  A+ +   M     + NL +  + + 
Sbjct: 94  ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMK 153

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
              +   L  AL  +  +  +G+ PN +TY+ LI G C    I+ A +   EM  KG   
Sbjct: 154 GYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRS 213

Query: 280 DKVSYYTVM-GYL-CK--EKRIKEVRDLMEKMVNDSNLFHD-------QGRIEEAKELVN 328
              S  +++ GYL C+  +       D +E  + +   F+        +G++ EA  L +
Sbjct: 214 SVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWD 273

Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
           ++   G  P+VV+Y  ++ G CR   ++ A K+ ++M  +G  PN V++T  ++G    G
Sbjct: 274 EVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG 333

Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
               A  + +  ++    P   T  +++ GL + G+  E  D+  + V +GF PT +  N
Sbjct: 334 DIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYN 393

Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
            +I    +EG ++ A    +E    G   + V +TSLI GFC+  +++ AL LL+DM   
Sbjct: 394 TIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK 453

Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
               D   Y T+ID   K   ++ A EL+ ++   GL P    Y ++I  +  +  VE+ 
Sbjct: 454 GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEA 513

Query: 569 LKLLEKMLSKQ-KCR-TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           + L +KM+++   C    Y  +I+ L   G L  A  I  ++L      D     VL+  
Sbjct: 514 IDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING 573

Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
             NKG    A K+   M  +N+IP + +   +      EG  +EA  L    ++RG +
Sbjct: 574 LCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLV 631



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 205/465 (44%), Gaps = 48/465 (10%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           + + Y ++++   K    + A      M  +GI     + + ++  Y +    +NA  + 
Sbjct: 179 NKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMF 238

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
           +   ++ +A N+   NT +  L    K+ +A    + +   GI+PNV++YN +I G+C  
Sbjct: 239 NDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRK 297

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GY---------------------------- 290
             I  A K+  EM   G +P+ V++  +M GY                            
Sbjct: 298 DNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTL 357

Query: 291 ------LCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
                 LCK  R  E RDL  K V+              + F  +G I  A  +  +M +
Sbjct: 358 GIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCE 417

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
           +G  P  VTYT++++GFC+   +D A K+L  M   G K +  +Y   ++G C       
Sbjct: 418 VGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKS 477

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
           A E++N       +PN   Y+ ++ G +    + EA D+ ++MV +G          LI 
Sbjct: 478 AHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLID 537

Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            L + G++  A     E L+KG   +    T LI G C KG  E A  +L+DM      P
Sbjct: 538 GLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIP 597

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH 557
             + Y T+I    K G ++EA  L  +ML +GLVP  +TY  +++
Sbjct: 598 SVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 642



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 167/372 (44%), Gaps = 35/372 (9%)

Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
             A +V + M   G       F+ LM  Y + G + NA  +   M+ A + P     +T 
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPT----DTT 356

Query: 218 IHVLVVGNKLAKALRFLERMQL------AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDE 271
           + +++ G  L KA R  E   L       G  P  + YN +I G+     I  A  +  E
Sbjct: 357 LGIIIKG--LCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYRE 414

Query: 272 MPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMS 331
           M   G +P  V+Y +++   CK   I    DL  K++ND                   M 
Sbjct: 415 MCEVGITPSTVTYTSLIDGFCKGNNI----DLALKLLND-------------------MK 451

Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
           + G   D+  Y  +++GFC+  ++  A ++L ++   G  PN   Y + + G  +     
Sbjct: 452 RKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 511

Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
           EA ++      E    +  TY+ ++ GL + G+L  A D+  EM+ KG  P      +LI
Sbjct: 512 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLI 571

Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
             LC +G+ + A+K +++   K    +V+ + +LI G  ++G+L+EA  L D+M      
Sbjct: 572 NGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLV 631

Query: 512 PDTVTYTTIIDA 523
           PD +TY  +++ 
Sbjct: 632 PDNITYDILVNG 643



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 162/365 (44%), Gaps = 3/365 (0%)

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
           EA+EL N+M  +G   D  T   ++    + G + +A++   Q    G + +  +Y+ F+
Sbjct: 23  EARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFV 82

Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
           + LC    S  A  ++       W P   T++ V+    +EG ++EA  +  +MV  G  
Sbjct: 83  HLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKS 142

Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
                   L++  C +G +  A   + E    G   N V ++ LI G C+ G++E+A   
Sbjct: 143 MNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEF 202

Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
             +M          +  +I++   K    + A  +    L  GL   V T+ T++   C+
Sbjct: 203 YSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCK 261

Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            G++ +   L +++++K       +YN +I   C    +  A K+  ++L      +A T
Sbjct: 262 EGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVT 321

Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
             +L++ Y  KG    A+ +  RM + N++P       + + L   G+S E   L  +FV
Sbjct: 322 FTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFV 381

Query: 680 ERGHI 684
            +G +
Sbjct: 382 SQGFV 386



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 112/242 (46%), Gaps = 23/242 (9%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y  +++   K      A ++L  M R+G++   +A+  L+  + +   +++A  +L+ 
Sbjct: 425 VTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNE 484

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           ++ A ++PN  I N+ I      N + +A+   ++M   GI  ++ TY  LI G     R
Sbjct: 485 LRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGR 544

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
           +  A  +  EM  KG  PD  ++  ++  LC                       ++G+ E
Sbjct: 545 LLYASDIHTEMLSKGILPDDRAHTVLINGLC-----------------------NKGQFE 581

Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
            A++++  M+    IP V+ Y  ++ G  + G L +A ++  +M   G  P+ ++Y   +
Sbjct: 582 NARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 641

Query: 382 NG 383
           NG
Sbjct: 642 NG 643



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/287 (21%), Positives = 129/287 (44%), Gaps = 10/287 (3%)

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           TP+    ++++  + R+    EA ++  +M+  G       +++++++  +EG +  A++
Sbjct: 2   TPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQ 61

Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
              +   +G  ++   ++  +   C K +   ALSLL +M      P   T+T++I A  
Sbjct: 62  HFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACV 121

Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRT 583
           K G V EA  L   M++ G    +    +++  YC  G +   L L+ ++        + 
Sbjct: 122 KEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKV 181

Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
            Y+ +I+  C  G +E+A +   ++     ++   + + ++E YL       +++ A  M
Sbjct: 182 TYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL----KCQSWQNAFTM 237

Query: 644 FNRNL---IPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
           FN  L   + ++     +   L  EGK  EA  L    + +G I P 
Sbjct: 238 FNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKG-ISPN 283


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 212/454 (46%), Gaps = 39/454 (8%)

Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
           P A +Y  L+  + + G++  A+ V S M+ + + PN    NT +  L    +++ AL+ 
Sbjct: 23  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82

Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
              MQ     P   ++N L++G+    R   AI+   EM   G  PD  SY+ ++  L  
Sbjct: 83  FREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSAL-- 137

Query: 294 EKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVG 353
                                 D GR+ EA  L    S M C PD++TY  +++G+C++G
Sbjct: 138 ---------------------SDSGRMAEAHAL---FSAMTCSPDIMTYNVLMDGYCKIG 173

Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
           +  +A+ +++++   G +PN  +Y+  +N  C   K  EA E+     E    PNA+T++
Sbjct: 174 QTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFN 233

Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE-GKMDGAKKFMQECLN 472
            ++ G  + G L +A  +  EM K G   T V  N LI SLC++ G +  A     +   
Sbjct: 234 TLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEG 293

Query: 473 KGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEE 532
            G    +V + SLI+GF ++ +  + L LL  M+     PD +TY  +I  L    RVE+
Sbjct: 294 AGLTPTIVTYNSLIQGFSERAN--DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVED 351

Query: 533 ATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENL 592
           A  L   M      P V T+  +I   C   +VE+   +L++M +     T +N +I   
Sbjct: 352 AQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTAPD--MTTFNTIILAF 406

Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
           C  G + +A +++  +L+     +  T + L   
Sbjct: 407 CKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHG 440



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 198/421 (47%), Gaps = 35/421 (8%)

Query: 156 LCQG-----AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
            C+G     A  V   M   G+       + L++     G++ +A+ +   MQ     P 
Sbjct: 35  FCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPT 94

Query: 211 LLICNTAIHVLVVGNKLA-KALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
               + + ++L+ G  +A +A+ F + M+ +G+ P++ +Y+ L+    D  R+ +A  L 
Sbjct: 95  ----SASHNILLRGFFMAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALF 150

Query: 270 DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQ 317
             M    CSPD ++Y  +M   CK  +  E + LM++++               N +   
Sbjct: 151 SAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKL 207

Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
            ++EEA E+  +M +  C+P+ VT+  ++ GFC+ G L+ A K+  +M   GCK   V+Y
Sbjct: 208 DKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTY 267

Query: 378 TAFLNGLCHN-GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
              ++ LC   G    A ++ N  E    TP  +TY+ ++ G     + ++   ++  M 
Sbjct: 268 NTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMH 325

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
            +G  P  +  N LI  LC   +++ A++         CA NV  F  LIRG C +  +E
Sbjct: 326 AEGCKPDVITYNCLISGLCSANRVEDAQRLFN---GMACAPNVTTFNFLIRGLCAQKKVE 382

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
           EA ++LD M      PD  T+ TII A  K G + +A E+M  ML  G  P   T   + 
Sbjct: 383 EARNILDRM----TAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALA 438

Query: 557 H 557
           H
Sbjct: 439 H 439



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 151/320 (47%), Gaps = 14/320 (4%)

Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
           DQA ++ +++      PN  +Y   + G C  G+  +A  + +  +     PNA T + +
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
           + GL   G++S A  + REM    F PT    N+L++     G+   A +F +E    G 
Sbjct: 67  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGV 123

Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
             ++ ++  L+      G + EA +L   M      PD +TY  ++D   K G+  EA  
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFSAMTC---SPDIMTYNVLMDGYCKIGQTYEAQS 180

Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLC 593
           LM ++L  G  P V TY  +I+ YC++ +VE+  ++  KM+       A  +N +I   C
Sbjct: 181 LMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFC 240

Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK-GIPLLAYKVACRMFNRNLIPDL 652
             G LE+A K+  ++ +   KA   T + L++S   K G    A  +  ++    L P +
Sbjct: 241 KAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTI 300

Query: 653 KLCKKVSERLILEGKSEEAD 672
                V+   +++G SE A+
Sbjct: 301 -----VTYNSLIQGFSERAN 315



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 118/223 (52%), Gaps = 18/223 (8%)

Query: 174 CRPEA--FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG-NKLAKA 230
           C P A  F+ L+  + +AG L +A+ + + M+K      ++  NT I  L      +  A
Sbjct: 225 CVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTA 284

Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
           +    +++ AG+TP ++TYN LI+G+ +  R  D ++L+  M  +GC PD ++Y  ++  
Sbjct: 285 VDLFNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISG 342

Query: 291 LCKEKRIKEVRDLMEKMVNDSNL---------FHDQGRIEEAKELVNQMSQMGCIPDVVT 341
           LC   R+++ + L   M    N+            Q ++EEA+ ++++M+     PD+ T
Sbjct: 343 LCSANRVEDAQRLFNGMACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTT 398

Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
           +  ++  FC+ G +  A+++++ M  HG  PNT +  A  +G+
Sbjct: 399 FNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 137/309 (44%), Gaps = 43/309 (13%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRNAMY 197
           D + Y ++++   K      A+ +++ + + G E  P  F+Y ++   Y +  K+  A  
Sbjct: 158 DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYE--PNVFTYSIIINCYCKLDKVEEAWE 215

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           V   M ++   PN +  NT I        L  A++    M+  G    ++TYN LI   C
Sbjct: 216 VFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLC 275

Query: 258 DLH-RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
                +  A+ L +++   G +P  V+Y +++                            
Sbjct: 276 KKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI---------------------------- 307

Query: 317 QGRIEEAKE---LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
           QG  E A +   L+  M   GC PDV+TY  +++G C    ++ A+++   M    C PN
Sbjct: 308 QGFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPN 364

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             ++   + GLC   K  EAR ++    +    P+  T++ ++    + G + +A +V++
Sbjct: 365 VTTFNFLIRGLCAQKKVEEARNIL----DRMTAPDMTTFNTIILAFCKAGAMHDAREVMK 420

Query: 434 EMVKKGFFP 442
           +M+K GF+P
Sbjct: 421 DMLKHGFYP 429



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 31/224 (13%)

Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
           K D A +  +E L    A N   +  LIRGFC+ G + +A+S+  DM      P+  T  
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE----- 573
           T++  L + G++  A +L  +M +   +PT  ++  ++  +   GR  +  K ++     
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVE 124

Query: 574 -----------------------KMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGK 607
                                   + S   C      YN +++  C  G   EA  ++ +
Sbjct: 125 PDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKE 184

Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           +L+   + +  T  +++  Y        A++V  +M   N +P+
Sbjct: 185 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPN 228


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 136/534 (25%), Positives = 249/534 (46%), Gaps = 31/534 (5%)

Query: 155 KLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLIC 214
           KL +G K +LR M + G+     +++ L+ A  +AGK+  A+  L+ M       +++ C
Sbjct: 39  KLSEG-KLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIAC 97

Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
              I  L    ++ +A      +    + PN +TY+ LI G C L  I  A   + EM  
Sbjct: 98  TVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEE 157

Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
           K C P+ ++Y +++                       N +  QG + +A +++ +M    
Sbjct: 158 KDCVPNVITYSSLI-----------------------NGYVKQGLLHDAFKVLRKMVHKN 194

Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
            +P++ TY  +++G  + G  D A  +  +M   G K N     AF+N +  +G+  EA 
Sbjct: 195 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 254

Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
           E++         P+ + Y+ +M G  + GK+S A ++ +EM  K      V  N+LI  L
Sbjct: 255 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL 314

Query: 455 CREGKMDGAKKF--MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
            + GK D    +  M+E    G + ++  + +++ G  +KG+   AL L ++M   K  P
Sbjct: 315 FKLGKSDTESIYSAMRE---MGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIP 371

Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
           + +T   +I+ L + GR+E A +++ +M+  GL PT  TYR +++   +  R + +L+  
Sbjct: 372 NAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTH 431

Query: 573 EKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
           E +++ Q    +  YN +I NLC  G   +A  +L  +      AD +T + L+  Y   
Sbjct: 432 ELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCIS 491

Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
                A+     M +  + PD++    +   L   G   EAD L+    +RG +
Sbjct: 492 SHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLV 545



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 143/593 (24%), Positives = 248/593 (41%), Gaps = 98/593 (16%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
           I Y  +++   K     GA+  L  M  +  +C P   +Y  L+  Y + G L +A  VL
Sbjct: 130 ITYSALIDGRCKLGDINGAESALHEMEEK--DCVPNVITYSSLINGYVKQGLLHDAFKVL 187

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAK----ALRFLERMQLAGITPNVLTYNCLIKG 255
             M      PN  IC  AI  L+ G+  A     AL    +M+  G+  NV   +  +  
Sbjct: 188 RKMVHKNAMPN--ICTYAI--LLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNN 243

Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
                R+++A +L+ +M   G  PD V+Y  +M                       + F 
Sbjct: 244 MKRSGRMEEAEELVAKMASGGLKPDLVNYTNLM-----------------------DGFL 280

Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
             G++  A  L  +M+    + D+VT+  ++N   ++G+ D  + +   M   G  P+  
Sbjct: 281 KSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSD-TESIYSAMREMGLSPDLA 339

Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
           +Y   LNG    G    A E+ N  +     PNAIT +++++GL   G++  A D+++EM
Sbjct: 340 TYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEM 399

Query: 436 VKKGFFPTPVE-----------------------------------INLLIQSLCREGKM 460
           V  G +PT                                       N+LI +LC+ G  
Sbjct: 400 VLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMT 459

Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
             A   +++   +G   +   + +LI G+C    L+ A      M   +  PD  TY  +
Sbjct: 460 RKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLL 519

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-- 578
           +  LSK G + EA +L+ ++  +GLVP   TY T++  +C+V   ++ L++  +M+ K  
Sbjct: 520 LGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGF 579

Query: 579 -QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
             K R AYN +I      G +++A +++ ++         +T  +L+             
Sbjct: 580 IPKPR-AYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILI------------- 625

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEE 690
              C   N   +PDL    K+S R        EA  L +   +RG +  +S +
Sbjct: 626 ---CGWCNLLKMPDLGSTLKISYR-------AEAKRLFIEMNDRGFVPCESTQ 668



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 186/421 (44%), Gaps = 43/421 (10%)

Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
           Q  +EEA  L  +M   G  PDVVT+ +++ G C+ G+L + K +L++M   G   N VS
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
           YT  L+ L   GK  EA   +          + I  +V++ GL + G++ EA  +   + 
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121

Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
           +    P  +  + LI   C+ G ++GA+  + E   K C  NV+ ++SLI G+ ++G L 
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181

Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDA--------------------------------- 523
           +A  +L  M      P+  TY  ++D                                  
Sbjct: 182 DAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFV 241

Query: 524 --LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
             + ++GR+EEA EL+ KM S GL P +V Y  ++  + + G+V   L L ++M SK   
Sbjct: 242 NNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 301

Query: 582 R--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKV 639
                +N +I  L   G   +   I   +       D +T + ++     KG    A ++
Sbjct: 302 FDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALEL 360

Query: 640 ACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEHLQRQRVFL 699
              M +R LIP+   C  +   L   G+ E A  ++   V  G + P S  +    R+ L
Sbjct: 361 WNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMG-LYPTSTTY----RILL 415

Query: 700 N 700
           N
Sbjct: 416 N 416



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 201/455 (44%), Gaps = 33/455 (7%)

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           N L +AL   E M  +GI P+V+T+  ++ G C   ++ +   L+ EM   G + + VSY
Sbjct: 3   NGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSY 62

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
             ++  L K  ++ E    +  M+   N F                       DV+  T 
Sbjct: 63  TILLDALFKAGKVAEALMTLACMIVRGNNF-----------------------DVIACTV 99

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++G  + G++ +A+ +   +Y     PN ++Y+A ++G C  G    A   ++  EE+ 
Sbjct: 100 LIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKD 159

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             PN ITYS +++G  ++G L +A  V+R+MV K   P      +L+    + G  D A 
Sbjct: 160 CVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIAL 219

Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
               +    G   NV    + +    + G +EEA  L+  M      PD V YT ++D  
Sbjct: 220 DLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGF 279

Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR--VEDLLKLLEKMLSKQKCR 582
            K+G+V  A  L  +M SK +V  +VT+  +I+   ++G+   E +   + +M       
Sbjct: 280 LKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYSAMREMGLSPDLA 339

Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
           T YN ++      G    A ++  ++       +A TC++++      G    A  +   
Sbjct: 340 T-YNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKE 398

Query: 643 MFNRNLIPDLKLCKKVSERLIL--EGKSEEADTLM 675
           M    L P        + R++L    KS  ADT++
Sbjct: 399 MVLMGLYP-----TSTTYRILLNISSKSRRADTIL 428



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 193/455 (42%), Gaps = 36/455 (7%)

Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
           + D + Y  +++   K+     A  + + M  + +      F+ L+    + GK  +   
Sbjct: 266 KPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTES 324

Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
           + S M++  ++P+L   NT ++          AL     M+   + PN +T N +I G C
Sbjct: 325 IYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLC 384

Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSN 312
           +  R+++AI ++ EM L G  P   +Y  ++    K +R   +    E +VN     D +
Sbjct: 385 EAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKD 444

Query: 313 LFH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
           +++         G   +A  ++  M + G I D  TY A+++G+C    L +A      M
Sbjct: 445 VYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTM 504

Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
                 P+  +Y   L GL   G   EA ++++  ++    PNA TY  +M G  +    
Sbjct: 505 LSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNT 564

Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
            E   +  EMV KGF P P   N+LI    + GKM  AK+ M E   KG +     +  L
Sbjct: 565 KECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDIL 624

Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
           I G+C         +LL       K PD       + +  K     EA  L ++M  +G 
Sbjct: 625 ICGWC---------NLL-------KMPD-------LGSTLKISYRAEAKRLFIEMNDRGF 661

Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
           VP   T   +   +   G+  D   LL+    +++
Sbjct: 662 VPCESTQACISSTFAAPGKKADARMLLKSTYKRKR 696



 Score = 45.8 bits (107), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 54/129 (41%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
           R   D   Y ++L  LSK  L   A  +L  + +RG+      +  LM  + +    +  
Sbjct: 508 RVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKEC 567

Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
           + +   M      P     N  I       K+ +A   +  MQ  G++P   TY+ LI G
Sbjct: 568 LRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICG 627

Query: 256 YCDLHRIKD 264
           +C+L ++ D
Sbjct: 628 WCNLLKMPD 636


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 216/446 (48%), Gaps = 21/446 (4%)

Query: 189 AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG---ITPN 245
           +G   +A+ V   + +  +   +   N A+  +   N  A   RF  RM  AG   +TP 
Sbjct: 31  SGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRF-NRMARAGASMVTPT 89

Query: 246 VLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
           V TY  LI   C   R+      +  +  KG   + + +  ++  LC +KR  +  D++ 
Sbjct: 90  VHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVL 149

Query: 306 KMVND----SNLFHD---------QGRIEEAKELVNQMSQ--MGCIPDVVTYTAVVNGFC 350
           + + +     N+F           + R +EA EL++ M+    GC+P+VV+Y+ V +G  
Sbjct: 150 RGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLL 209

Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
           + G+ D+A    ++M      PN V+Y++ +  LC      +A E+ +   +   TPN  
Sbjct: 210 KGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCF 269

Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
           TY+ ++HG    G+L+EA   + +M   G  P  V  +  +  LC+ G+   A+K     
Sbjct: 270 TYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSM 329

Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
           + +G   ++  ++SL+ G+  +G L E   L D M      PD   + T+I A +K G+V
Sbjct: 330 VKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKV 389

Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQV 588
           +EA  +  KM  +GL P  VTY T+I+ YC++ R+E+ L L ++M+S         YN +
Sbjct: 390 DEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIM 449

Query: 589 IENLCSFGYLEEAGKILGKVLRTASK 614
           ++ L   G    A +   +++++  K
Sbjct: 450 LQGLFRTGRTGTAKEFYVQIIKSGKK 475



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 144/310 (46%), Gaps = 14/310 (4%)

Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMYVLSM 201
           + ++L+ L      Q A  +L +MA  G  C P   SY  V     + G    A      
Sbjct: 164 HTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYRE 223

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M    + PN++  ++ I  L  G  + KA+   +RM   G+TPN  TY  L+ G+C   +
Sbjct: 224 MLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQ 283

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND---------SN 312
           + +AIK +++M   G  P+ V+Y + M YLCK  R  E R +   MV           S+
Sbjct: 284 LTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSS 343

Query: 313 LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
           L H    +G + E   L + M Q    PD   +  ++    + G++D+A  +  +M H G
Sbjct: 344 LLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQG 403

Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
            KPN V+Y   +NG C   +   A  +         +PN ITY++++ GL R G+   A 
Sbjct: 404 LKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAK 463

Query: 430 DVVREMVKKG 439
           +   +++K G
Sbjct: 464 EFYVQIIKSG 473



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 134/289 (46%), Gaps = 12/289 (4%)

Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
           TP   TY +++      G+L      +  +VKKGF   P+  N L++ LC + + D A  
Sbjct: 87  TPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMD 146

Query: 466 FMQECLNK-GCAVNVVNFTSLIRGFCQKGDLEEALSLL----DDMYLCKKDPDTVTYTTI 520
            +   + + GC  NV + T +++G C +   +EAL LL    DD   C   P+ V+Y+T+
Sbjct: 147 IVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCL--PNVVSYSTV 204

Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-- 578
            D L K G  ++A     +ML + ++P VVTY ++I   C+   ++  +++ ++M+    
Sbjct: 205 TDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGV 264

Query: 579 -QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
              C T Y  ++   CS G L EA K L K+     + +  T    ++     G    A 
Sbjct: 265 TPNCFT-YTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEAR 323

Query: 638 KVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
           K+   M  R L PD+     +     +EG   E   L    V+   +QP
Sbjct: 324 KIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQS-DMQP 371



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 86/167 (51%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
           + Y   ++ L K   C  A+++   M +RG++     +S L+  Y+  G L     +  +
Sbjct: 304 VTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDL 363

Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
           M ++ + P+  + NT I+      K+ +A+    +M+  G+ PN +TYN LI GYC + R
Sbjct: 364 MVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITR 423

Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
           +++A+ L  EM   G SP+ ++Y  ++  L +  R    ++   +++
Sbjct: 424 MENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQII 470


>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
 gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
          Length = 321

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 163/316 (51%), Gaps = 23/316 (7%)

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
           M   G  P V+T+  L+ G C  +R+ DA +L++ M  +GC P+ + +  +M  LCKE  
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKE-- 58

Query: 297 IKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELD 356
                                GR  EA   +  M  MG  P +VTY  +++GFC+  +L 
Sbjct: 59  ---------------------GRSAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLH 97

Query: 357 QAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVM 416
           +A ++LQ+M   G +PN V+Y  FL+GLC  GK  +A  +     E+    +   Y+ ++
Sbjct: 98  RALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLI 157

Query: 417 HGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA 476
            GL + GKL+EA  ++ EM   G  P P   N ++  LC+  +++ A K  +     G  
Sbjct: 158 DGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGIL 217

Query: 477 VNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
            + + F  ++ G+C+   +++AL LL  M      P  V Y T+IDAL++ GRV EA  L
Sbjct: 218 PDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRL 277

Query: 537 MMKMLSKGLVPTVVTY 552
           + +M+S+GL P   TY
Sbjct: 278 LQEMISRGLSPNSRTY 293



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 155/292 (53%), Gaps = 2/292 (0%)

Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
           M++ GCIP VVT+  +V+G C+   L  A ++++ M   GC PN + +   ++ LC  G+
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
           S EA   I T      +P  +TY++++ G  +E KL  A ++++EM  +G  P  V  N 
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
            +  LC+ GK+D A    +    K   ++V  +T+LI G CQ G L EA SLLD+M    
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
             P    Y  I+  L K  R+ EA +L  +M   G++P  +T+  ++  YC+  R++D L
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDAL 240

Query: 570 KLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
            LL++M S         YN +I+ L   G + EA ++L +++      ++ T
Sbjct: 241 LLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRT 292



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 157/314 (50%), Gaps = 27/314 (8%)

Query: 167 MARRGIECRPE--AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
           MA +G  C P    F  L+    +A +L +A  ++ +M +    PN L+ N  +  L   
Sbjct: 1   MAEKG--CIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKE 58

Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
            + A+A  ++E M+  G++P ++TYN LI G+C   ++  A++++ EM  +G  P+ V+Y
Sbjct: 59  GRSAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTY 118

Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
            T +  LCK                        G++++A  L   M++     DV  YT 
Sbjct: 119 NTFLHGLCK-----------------------YGKVDDALALFRAMTEKKIRLDVYGYTT 155

Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
           +++G C+ G+L +A  +L +M + GC P    Y A L+ LC   +  EA ++        
Sbjct: 156 LIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSG 215

Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
             P+ +T+ +++ G  R  ++ +A  ++++M   G  P  V  N LI +L R G++  A 
Sbjct: 216 ILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAY 275

Query: 465 KFMQECLNKGCAVN 478
           + +QE +++G + N
Sbjct: 276 RLLQEMISRGLSPN 289



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 134/288 (46%), Gaps = 16/288 (5%)

Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA--FSYLMVAYSRAGKLRNAMYVL 199
           + + ++++ L K      A  ++ +MA RG  C P A  F+ +M A  + G+   A   +
Sbjct: 11  VTFGILVDGLCKANRLTDAFELVEVMAERG--CFPNALVFNGIMDALCKEGRSAEAYGYI 68

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             M+   V+P ++  N  I       KL +AL  L+ M   G  PN +TYN  + G C  
Sbjct: 69  ETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKY 128

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
            ++ DA+ L   M  K    D   Y T++  LC+  ++ E   L+++M N          
Sbjct: 129 GKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCY 188

Query: 312 ----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
               +      RI EA +L  +M+  G +PD +T+  +V G+CR   +D A  +LQQM  
Sbjct: 189 NAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKS 248

Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
            G  P  V Y   ++ L   G+  EA  ++        +PN+ TY+++
Sbjct: 249 AGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 144/295 (48%), Gaps = 9/295 (3%)

Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
           E+   P  +T+ +++ GL +  +L++A ++V  M ++G FP  +  N ++ +LC+EG+  
Sbjct: 3   EKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSA 62

Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
            A  +++   + G +  +V +  LI GFC++  L  AL +L +M     +P+ VTY T +
Sbjct: 63  EAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFL 122

Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-----L 576
             L K G+V++A  L   M  K +   V  Y T+I   CQ G++ +   LL++M     +
Sbjct: 123 HGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCV 182

Query: 577 SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLA 636
            K  C   YN ++  LC    + EA K+  ++  +    D  T  ++V  Y        A
Sbjct: 183 PKPGC---YNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDA 239

Query: 637 YKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
             +  +M +  L P   +   + + L   G+  EA  L+   + RG + P S  +
Sbjct: 240 LLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRG-LSPNSRTY 293



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 2/173 (1%)

Query: 139 HDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
           H+P  + Y   L  L K      A  + R M  + I      ++ L+    +AGKL  A 
Sbjct: 111 HEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAY 170

Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
            +L  M+ +   P     N  +  L  G+++ +A +  +RM  +GI P+ LT+  ++ GY
Sbjct: 171 SLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGY 230

Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
           C  HRI DA+ L+ +M   G +P +V Y T++  L +  R+ E   L+++M++
Sbjct: 231 CRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMIS 283



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 3/168 (1%)

Query: 117 SQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP 176
            + D+ +AL   + A  + + R D   Y  +++ L +      A  +L  M   G   +P
Sbjct: 129 GKVDDALAL---FRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKP 185

Query: 177 EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLER 236
             ++ ++    +  ++  A  +   M  + + P+ L     +     G+++  AL  L++
Sbjct: 186 GCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQ 245

Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
           M+ AG+ P  + YN LI       R+ +A +L+ EM  +G SP+  +Y
Sbjct: 246 MKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY 293



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 56/118 (47%)

Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
           P  Y  +L  L K      A ++ + M   GI      F  ++  Y R  ++ +A+ +L 
Sbjct: 185 PGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQ 244

Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
            M+ A +AP  +I NT I  L    ++++A R L+ M   G++PN  TY  + K   D
Sbjct: 245 QMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALMRKQQTD 302


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 233/519 (44%), Gaps = 44/519 (8%)

Query: 77  LVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWR 136
           L + VC ++ ++  W+  L+  + + L S    Q+   L S     V+  FF W +    
Sbjct: 13  LAKIVCGIV-VKGHWNSLLKPNVGSNLTSTILNQVLLNL-SLDGCCVSWAFFKWVESNLN 70

Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRP-----------------EAF 179
           ++H     + M+  L+K K  + A+ +L  +A R     P                 +  
Sbjct: 71  HKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQIL 130

Query: 180 SYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
           S+L++ Y+ +   ++A+ V   M+     P+L  C   ++ L          +  ++M  
Sbjct: 131 SWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVR 190

Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
            G+ PN+  +N LI   C    ++ A +L++EM  +   PD  +Y T++   CK      
Sbjct: 191 VGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCK------ 244

Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                            +G   EA  + ++M + G  PD+VTY +++ GFCR G + +A 
Sbjct: 245 -----------------KGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREAL 287

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
           ++ +++  +G  PN V+YT  ++G C      EA  +    E E   P  +TY+ ++  L
Sbjct: 288 RLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKL 345

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
             EGK+ +A  ++ EM ++   P  V  N LI + C+ G M  A K  ++ L  G   + 
Sbjct: 346 CEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQ 405

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
             F +LI GFC+  +++ A   L +M      P   TY+ ++D+       E    L  +
Sbjct: 406 FTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDE 465

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
           +  KGL   +  YR +I R C++ ++E   ++   M  K
Sbjct: 466 LSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGK 504



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 194/372 (52%), Gaps = 14/372 (3%)

Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
           ++L  L+K +L     +V + M R G+      F+ L+ A  ++G +  A  +L+ M+  
Sbjct: 167 VLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESR 226

Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
            + P+L   NT I +        +AL   +RM+  G++P+++TYN LI G+C   R+++A
Sbjct: 227 FIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREA 286

Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE---VRDLME------KMVNDSNLFH- 315
           ++L  E  + G +P+ V+Y T++   C+   ++E   +R++ME       +V  +++   
Sbjct: 287 LRLFRE--INGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRK 344

Query: 316 --DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
             ++G+I++A  L+N+MS+    PD VT   ++N +C++G++  A K+ ++M   G KP+
Sbjct: 345 LCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPD 404

Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
             ++ A ++G C   +   A+E +    +  ++P+  TYS ++     +        +  
Sbjct: 405 QFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPD 464

Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
           E+ +KG F        LI+ LC+  K++ A++       KG   + V +TSL   + + G
Sbjct: 465 ELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAG 524

Query: 494 DLEEALSLLDDM 505
               A  +LD+M
Sbjct: 525 KAIAASDMLDEM 536



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 209/482 (43%), Gaps = 33/482 (6%)

Query: 216 TAIHVLVVGNKLAKALRFLERMQLAGI--TPNVLT---------------YNCLIKGYCD 258
           T IH L    +   A   LER+ +     +P+VL                 + L+  Y +
Sbjct: 80  TMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYAN 139

Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNL 313
               +DAI++ + M + G  P   +   ++  L K +    V  + +KMV      + ++
Sbjct: 140 SRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHI 199

Query: 314 FH-------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
           F+         G +E+A++L+N+M      PD+ TY  +++ +C+ G   +A  +  +M 
Sbjct: 200 FNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRME 259

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G  P+ V+Y + + G C  G+  EA  +    E    TPN +TY+ ++ G  R   L 
Sbjct: 260 RGGVSPDIVTYNSLIYGFCREGRMREALRLFR--EINGATPNHVTYTTLIDGYCRVNDLE 317

Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
           EA  +   M  +G  P  V  N +++ LC EGK+  A + + E   +    + V   +LI
Sbjct: 318 EALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLI 377

Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
             +C+ GD+  A+ +   M      PD  T+  +I    K   V+ A E + +ML  G  
Sbjct: 378 NAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFS 437

Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKI 604
           P+  TY  ++  Y      E +++L +++  K      + Y  +I  LC    +E A +I
Sbjct: 438 PSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERI 497

Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
              +     K D+     L  +Y   G  + A  +   M  R L+  LK+ +  S     
Sbjct: 498 FTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAG 557

Query: 665 EG 666
           +G
Sbjct: 558 DG 559



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 141/317 (44%), Gaps = 16/317 (5%)

Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
           D   Y  ++ +  K  +   A  +   M R G+      ++ L+  + R G++R A+ + 
Sbjct: 231 DLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLF 290

Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
             +  A   PN +   T I      N L +ALR  E M++ G+ P V+TYN +++  C+ 
Sbjct: 291 REINGAT--PNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEE 348

Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ-- 317
            +IKDA +L++EM  +   PD V+  T++   CK   +     + +KM+ ++ L  DQ  
Sbjct: 349 GKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKML-EAGLKPDQFT 407

Query: 318 -----------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
                        ++ AKE + +M   G  P   TY+ +V+ +      +   ++  ++ 
Sbjct: 408 FKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELS 467

Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
             G   +   Y A +  LC   K   A  +    + +    +++ Y+ + +   + GK  
Sbjct: 468 RKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAI 527

Query: 427 EACDVVREMVKKGFFPT 443
            A D++ EM K+    T
Sbjct: 528 AASDMLDEMDKRRLMIT 544


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 234/516 (45%), Gaps = 21/516 (4%)

Query: 136 RYRHDPIVYYMMLEILSKTKLCQG--AKRVLRLMARRGIECRPE--AFSYLMVAYSRAGK 191
           ++R +P VY   + I +     Q   A  +L LM   G  C+P    F  ++ A+ + G 
Sbjct: 285 KFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENG--CKPSIATFCTIIDAFCKEGN 342

Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
           +  A      ++   ++ N ++ N  I   V    +++A    E M+   I P+ +T+N 
Sbjct: 343 VELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNT 402

Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
           L+ G+    + +D  +L+ ++ + G   D       +  LC   R  E   L+E ++   
Sbjct: 403 LVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKG 462

Query: 312 ------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
                         + + G  E A      M + G  P   T ++++    R G LD+A 
Sbjct: 463 IPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAW 522

Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGL 419
             L  M   G     +++T  L+G    G    A  + N  +     P+A+ ++  ++GL
Sbjct: 523 IALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGL 582

Query: 420 RREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNV 479
              G +++A DV  +M++KGF P     N LI   C+ GK++ A K ++E   +G   ++
Sbjct: 583 CISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDI 642

Query: 480 VNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK 539
                +I G C++G ++ A+    DM      PD VTY T+ID   K   V  A +LMMK
Sbjct: 643 FTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMK 702

Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGY 597
           M   G  P + TY   IH YC V ++   + +LE+++S         YN +I  +C+   
Sbjct: 703 MSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNV-I 761

Query: 598 LEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
           L+ A  +  K+L+ A   +  T +VL+  +  +G+P
Sbjct: 762 LDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMP 797



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/495 (22%), Positives = 209/495 (42%), Gaps = 49/495 (9%)

Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
           LM A+ ++     A+ +LS M++  V PN    +    +L+         +    +   G
Sbjct: 193 LMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKG 252

Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
             PN  T+N LI  +C     +    L+  M    C PD  SY  V+   C + +     
Sbjct: 253 PCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYAL 312

Query: 302 DLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
            L+  M+ +             + F  +G +E A++  +++  MG   + + Y  +++G+
Sbjct: 313 HLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGY 372

Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAF----------------------------- 380
            +  ++ QA  + ++M      P+ +++                                
Sbjct: 373 VKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDS 432

Query: 381 ------LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
                 + GLC  G+  EA +++    E+   P+ + ++ ++      G    A      
Sbjct: 433 SLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGI 492

Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
           MVK G  P+    + L+ SL R+G +D A   + + ++KG  V  + FT L+ G+ + G 
Sbjct: 493 MVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGA 552

Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
           +  A SL ++M      PD V +   I+ L  +G + +A ++   ML KG VP    Y +
Sbjct: 553 VNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNS 612

Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTA 612
           +I  +C+VG++ + LKL+ +M  +      +  N +I  LC  G ++ A +    + R  
Sbjct: 613 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 672

Query: 613 SKADASTCHVLVESY 627
              D  T + L++ Y
Sbjct: 673 LSPDIVTYNTLIDGY 687



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 159/352 (45%), Gaps = 13/352 (3%)

Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
           A ++L  +  +GI     AF+ ++ AY  AG    A Y   +M K  + P+   C++ + 
Sbjct: 451 AMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLI 510

Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
            LV    L +A   L  M   G     + +  L+ GY  +  +  A  L +EM  +G  P
Sbjct: 511 SLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFP 570

Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVND----SNLFHDQ--------GRIEEAKELV 327
           D V++   +  LC    + +  D+   M+      +N  ++         G++ EA +LV
Sbjct: 571 DAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLV 630

Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
            +M++ G +PD+ T   ++ G C+ G +  A +    M   G  P+ V+Y   ++G C  
Sbjct: 631 REMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKA 690

Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
                A +++    +  W P+  TY++ +HG     K++ A  ++ E++  G  P  V  
Sbjct: 691 FDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTY 750

Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
           N +I ++C    +D A     + L      N V    L+  FC++G  E+A+
Sbjct: 751 NTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAI 801



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/502 (22%), Positives = 199/502 (39%), Gaps = 76/502 (15%)

Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
           + +T +   V      +AL  L +M+  G+TPN    + L +            KL  ++
Sbjct: 189 VLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDV 248

Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQ 332
             KG  P+  ++  ++   C++                        RI EA  L++ M +
Sbjct: 249 VRKGPCPNNFTFNLLILEFCRK---------------------GWTRIGEA--LLHVMGK 285

Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
             C PDV +Y  V+N  C  G+   A  +L  M  +GCKP+  ++   ++  C  G    
Sbjct: 286 FRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVEL 345

Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL-- 450
           AR+  +  E+   + N I Y++++ G  +   +S+A  +  EM  K   P  +  N L  
Sbjct: 346 ARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVA 405

Query: 451 ---------------------------------IQSLCREGKMDGAKKFMQECLNKGCAV 477
                                            +  LC  G+ D A K ++  L KG   
Sbjct: 406 GHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPP 465

Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
           +VV F S+I  +   G  E A      M      P + T ++++ +L + G ++EA   +
Sbjct: 466 SVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIAL 525

Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR------TAYNQVIEN 591
             M+ KG   T + +  ++  Y ++G V     + E + ++ K R       A+   I  
Sbjct: 526 YDMIDKGFPVTNMAFTVLLDGYFRIGAV----NMAESLWNEMKGRGVFPDAVAFAAFING 581

Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
           LC  G + +A  +   +LR     +    + L+  +   G    A K+   M  R L+PD
Sbjct: 582 LCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPD 641

Query: 652 L--------KLCKKVSERLILE 665
           +         LCK+   +L +E
Sbjct: 642 IFTVNMIICGLCKQGRMKLAIE 663


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.136    0.404 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,221,360,205
Number of Sequences: 23463169
Number of extensions: 409201739
Number of successful extensions: 1340848
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7663
Number of HSP's successfully gapped in prelim test: 4688
Number of HSP's that attempted gapping in prelim test: 1081217
Number of HSP's gapped (non-prelim): 78867
length of query: 701
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 551
effective length of database: 8,839,720,017
effective search space: 4870685729367
effective search space used: 4870685729367
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)