BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037695
(701 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 169/623 (27%), Positives = 296/623 (47%), Gaps = 53/623 (8%)
Query: 115 LRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIEC 174
LRSQ D+ AL+ F A ++ + +P +Y +L L ++ K++L M E
Sbjct: 57 LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116
Query: 175 RPEAFSYLMVAYSRAGKLRNAMYVLS-MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
F L+ +Y++ + V+ M+ + + P+ N +++LV GN L
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176
Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYL- 291
+M + GI P+V T+N LIK C H+++ AI ++++MP G PD+ ++ TVM GY+
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 292 ---------------------------------CKEKRIKEVRDLMEKMVNDSNLFHDQ- 317
CKE R+++ + +++M N F DQ
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296
Query: 318 ------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
G ++ A E+++ M Q G PDV TY +V++G C++GE+ +A ++L QM
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
C PNTV+Y ++ LC + EA E+ + P+ T++ ++ GL
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
A ++ EM KG P N+LI SLC +GK+D A +++ GCA +V+ + +L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
I GFC+ EA + D+M + ++VTY T+ID L K+ RVE+A +LM +M+ +G
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGK 603
P TY +++ +C+ G ++ +++ M S + Y +I LC G +E A K
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
+L + + +++ K A + M +N P + ++ R +
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656
Query: 664 LEGKS--EEADTLMLRFVERGHI 684
G EA ++ +E+G +
Sbjct: 657 CNGGGPIREAVDFLVELLEKGFV 679
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 234/490 (47%), Gaps = 29/490 (5%)
Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY-- 181
AL F Q + D + ++ L K + A ++ +M + G + P+ ++Y
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD--PDVYTYNS 335
Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
++ + G+++ A+ VL M +PN + NT I L N++ +A + G
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
I P+V T+N LI+G C + A++L +EM KGC PD+ +Y ++ LC
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS-------- 447
Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
+G+++EA ++ QM GC V+TY +++GFC+ + +A+++
Sbjct: 448 ---------------KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
+M HG N+V+Y ++GLC + + +A ++++ E P+ TY+ ++ R
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR 552
Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
G + +A D+V+ M G P V LI LC+ G+++ A K ++ KG +
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612
Query: 482 FTSLIRGFCQKGDLEEALSLLDDMY-LCKKDPDTVTYTTIIDAL-SKNGRVEEATELMMK 539
+ +I+G +K EA++L +M + PD V+Y + L + G + EA + +++
Sbjct: 613 YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVE 672
Query: 540 MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLE 599
+L KG VP + + + E L+KL+ ++ K + +++ L +
Sbjct: 673 LLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQ 732
Query: 600 EAGKILGKVL 609
+A LG VL
Sbjct: 733 DALATLGGVL 742
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 253 bits (645), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 151/512 (29%), Positives = 262/512 (51%), Gaps = 38/512 (7%)
Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
R G+L L M P+++ C T I K KA + LE ++ +G P+V+
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
TYN +I GYC I +A+ ++D M + SPD V+Y T++ LC
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLC--------------- 215
Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
D G++++A E++++M Q C PDV+TYT ++ CR + A K+L +M
Sbjct: 216 --------DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
GC P+ V+Y +NG+C G+ EA + +N PN IT+++++ + G+ +
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
A ++ +M++KGF P+ V N+LI LCR+G + A +++ GC N +++ L+
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
GFC++ ++ A+ L+ M PD VTY T++ AL K+G+VE+A E++ ++ SKG P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKIL 605
++TY TVI + G+ +KLL++M +K + Y+ ++ L G ++EA K
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 606 GKVLRTASKADASTCHVLV-----ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
+ R + +A T + ++ ++ I L + M NR P+ + E
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF-----MINRGCKPNETSYTILIE 562
Query: 661 RLILEGKSEEADTLMLRFVERGHIQPKSEEHL 692
L EG ++EA L+ +G ++ S E +
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 243/453 (53%), Gaps = 32/453 (7%)
Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
A ++L ++ G P+ +Y ++ Y +AG++ NA+ VL M +V+P+++ NT
Sbjct: 156 AAKILEILEGSG--AVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTI 210
Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
+ L KL +A+ L+RM P+V+TY LI+ C + A+KL+DEM +GC
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC 270
Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
+PD V+Y ++ +CKE GR++EA + +N M GC P
Sbjct: 271 TPDVVTYNVLVNGICKE-----------------------GRLDEAIKFLNDMPSSGCQP 307
Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
+V+T+ ++ C G A+K+L M G P+ V++ +N LC G A +++
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
+ PN+++Y+ ++HG +E K+ A + + MV +G +P V N ++ +LC++
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
GK++ A + + + +KGC+ ++ + ++I G + G +A+ LLD+M PDT+TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
++++ LS+ G+V+EA + + G+ P VT+ +++ C+ + + + L M++
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 578 K--QKCRTAYNQVIENLCSFGYLEEAGKILGKV 608
+ + T+Y +IE L G +EA ++L ++
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 215/421 (51%), Gaps = 19/421 (4%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
D I Y +M+ K A VL M+ P+ +Y ++ + +GKL+ AM
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS-----VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
VL M + P+++ I + + A++ L+ M+ G TP+V+TYN L+ G C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
R+ +AIK +++MP GC P+ +++ ++ +C R + L+ M+
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
N +G + A +++ +M Q GC P+ ++Y +++GFC+ ++D+A + L++M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
GC P+ V+Y L LC +GK +A E++N + +P ITY+ V+ GL + GK
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
+A ++ EM K P + + L+ L REGK+D A KF E G N V F S+
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
+ G C+ + A+ L M P+ +YT +I+ L+ G +EA EL+ ++ +KGL
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Query: 546 V 546
+
Sbjct: 586 M 586
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 42/255 (16%)
Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGF------ 489
V F VE N ++ + R G+++ KF++ + G +++ T+LIRGF
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 490 -----------------------------CQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
C+ G++ ALS+LD M + PD VTY TI
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTI 210
Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK 580
+ +L +G++++A E++ +ML + P V+TY +I C+ V +KLL++M +
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR-G 269
Query: 581 CR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAY 637
C YN ++ +C G L+EA K L + + + + T ++++ S + G + A
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 638 KVACRMFNRNLIPDL 652
K+ M + P +
Sbjct: 330 KLLADMLRKGFSPSV 344
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 1/201 (0%)
Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
+N A+ V + +R + G+LEE L++M PD + TT+I + G+
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIE 590
+A +++ + G VP V+TY +I YC+ G + + L +L++M T YN ++
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVT-YNTILR 212
Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
+LC G L++A ++L ++L+ D T +L+E+ A K+ M +R P
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 651 DLKLCKKVSERLILEGKSEEA 671
D+ + + EG+ +EA
Sbjct: 273 DVVTYNVLVNGICKEGRLDEA 293
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 249 bits (637), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 262/499 (52%), Gaps = 12/499 (2%)
Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
Y ++LEIL + A V M R I F +M A+ ++ +A+ +L M
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
K PN +I T IH L N++ +AL+ LE M L G P+ T+N +I G C RI
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEK-----MVNDSNLFHD-- 316
+A K+++ M ++G +PD ++Y +M LCK R+ +DL + +V + L H
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364
Query: 317 -QGRIEEAKELVNQM-SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
GR+++AK +++ M + G +PDV TY +++ G+ + G + A ++L M + GCKPN
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
SYT ++G C GK EA ++N + PN + ++ ++ +E ++ EA ++ RE
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
M +KG P N LI LC ++ A +++ +++G N V + +LI F ++G+
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
++EA L+++M D +TY ++I L + G V++A L KML G P+ ++
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
+I+ C+ G VE+ ++ ++M+ + +N +I LC G +E+ + K+
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 613 SKADASTCHVLVESYLNKG 631
D T + L+ S+L KG
Sbjct: 665 IPPDTVTFNTLM-SWLCKG 682
Score = 240 bits (613), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 162/607 (26%), Positives = 285/607 (46%), Gaps = 21/607 (3%)
Query: 98 ELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
LRN + P Q+ +L + +++ F W Q YRH VY +++ L
Sbjct: 68 SLRNSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEF 127
Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAG-KLRNAMYVLSMMQKAAVAPNLLICNT 216
+ R+L M GI + F +M Y +AG + +L M + P N
Sbjct: 128 KTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNV 187
Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
+ +LV GN A M I P + T+ ++K +C ++ I A+ L+ +M G
Sbjct: 188 VLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG 247
Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHDQ-------GRIEEAK 324
C P+ V Y T++ L K R+ E L+E+M V D+ F+D RI EA
Sbjct: 248 CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA 307
Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
++VN+M G PD +TY ++NG C++G +D AK +++ KP V + ++G
Sbjct: 308 KMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK----DLFYRIPKPEIVIFNTLIHGF 363
Query: 385 CHNGKSLEAREMINTSEEEWW-TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
+G+ +A+ +++ + P+ TY+ +++G +EG + A +V+ +M KG P
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
+L+ C+ GK+D A + E G N V F LI FC++ + EA+ +
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 504 DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVG 563
+M PD T+ ++I L + ++ A L+ M+S+G+V VTY T+I+ + + G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 564 RVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
+++ KL+ +M+ + YN +I+ LC G +++A + K+LR +C+
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVER 681
+L+ G+ A + M R PD+ + L G+ E+ T M R ++
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT-MFRKLQA 662
Query: 682 GHIQPKS 688
I P +
Sbjct: 663 EGIPPDT 669
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 175/350 (50%), Gaps = 13/350 (3%)
Query: 160 AKRVLR-LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
AK VL ++ GI ++ L+ Y + G + A+ VL M+ PN+ +
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
K+ +A L M G+ PN + +NCLI +C HRI +A+++ EMP KGC
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKEL 326
PD ++ +++ LC+ IK L+ M+++ N F +G I+EA++L
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
VN+M G D +TY +++ G CR GE+D+A+ + ++M G P+ +S +NGLC
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
+G EA E TP+ +T++ +++GL R G++ + + R++ +G P V
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
N L+ LC+ G + A + E + G N ++ L++ + L+
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 88/172 (51%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
+ + Y ++ + + A++++ M +G ++ L+ RAG++ A +
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
M + AP+ + CN I+ L + +A+ F + M L G TP+++T+N LI G C
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
RI+D + + ++ +G PD V++ T+M +LCK + + L+++ + D
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 178/630 (28%), Positives = 294/630 (46%), Gaps = 57/630 (9%)
Query: 83 RLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPI 142
RL+ + S + L++++ ++ P + ++ D + AL F +W + RY+H
Sbjct: 65 RLLSILSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVY 124
Query: 143 VYYMMLEILSKT--------------KLCQG---AKRVLRLMARRGIECRPE-------- 177
Y +L +L K C A VL L + + R E
Sbjct: 125 SYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIG 184
Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
++ L+ + +R G + V M + V PN+ N ++ + +A +++ ++
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
AG+ P+ TY LI GYC + A K+ +EMPLKGC ++V+Y ++ LC +RI
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
E DL KM +D C P V TYT ++ C +
Sbjct: 305 DEAMDLFVKMKDDE-----------------------CFPTVRTYTVLIKSLCGSERKSE 341
Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
A ++++M G KPN +YT ++ LC K +ARE++ E+ PN ITY+ +++
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
G + G + +A DVV M + P N LI+ C+ + A + + L +
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLP 460
Query: 478 NVVNFTSLIRGFCQKGDLEEA---LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
+VV + SLI G C+ G+ + A LSL++D L PD TYT++ID+L K+ RVEEA
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV---PDQWTYTSMIDSLCKSKRVEEAC 517
Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENL 592
+L + KG+ P VV Y +I YC+ G+V++ +LEKMLSK +N +I L
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
C+ G L+EA + K+++ + ST +L+ L G AY +M + PD
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
+ EG+ +A+ +M + E G
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 197/405 (48%), Gaps = 26/405 (6%)
Query: 173 ECRPEAFSYLMVAYSRAGKLRN--AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
EC P +Y ++ S G R A+ ++ M++ + PN+ I L K KA
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
L +M G+ PNV+TYN LI GYC I+DA+ +++ M + SP+ +Y ++
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
CK + +A ++N+M + +PDVVTY ++++G C
Sbjct: 438 YCK------------------------SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
R G D A ++L M G P+ +YT+ ++ LC + + EA ++ ++ E++ PN +
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
Y+ ++ G + GK+ EA ++ +M+ K P + N LI LC +GK+ A ++
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
+ G V T LI + GD + A S M PD TYTT I + GR+
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
+A ++M KM G+ P + TY ++I Y +G+ +L++M
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/510 (24%), Positives = 233/510 (45%), Gaps = 45/510 (8%)
Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMM 202
Y ++++ L + A+ +L M +G+ ++ L+ Y + G + +A+ V+ +M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 203 QKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRI 262
+ ++PN N I N + KA+ L +M + P+V+TYN LI G C
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 263 KDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEE 322
A +L+ M +G PD+ +Y +++ LCK KR+ EE
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV-----------------------EE 515
Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
A +L + + Q G P+VV YTA+++G+C+ G++D+A ML++M C PN++++ A ++
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFP 442
GLC +GK EA + + P T ++++H L ++G A ++M+ G P
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635
Query: 443 TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLL 502
IQ+ CREG++ A+ M + G + ++ ++SLI+G+ G A +L
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Query: 503 DDMYLCKKDPDTVTYTTIID------------------ALSKNGRVEEATELMMKMLSKG 544
M +P T+ ++I A+S + EL+ KM+
Sbjct: 696 KRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHS 755
Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEA 601
+ P +Y +I C+VG + K+ + M + + +N ++ C EA
Sbjct: 756 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 815
Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKG 631
K++ ++ +C VL+ KG
Sbjct: 816 AKVVDDMICVGHLPQLESCKVLICGLYKKG 845
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/518 (23%), Positives = 216/518 (41%), Gaps = 71/518 (13%)
Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
I Y ++ K + + A V+ LM R + ++ L+ Y ++ + AM VL+
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNK 452
Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
M + V P+++ N+ I A R L M G+ P+ TY +I C R
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------N 312
+++A L D + KG +P+ V Y ++ CK ++ E ++EKM++ +
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 313 LFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHG 369
L H G+++EA L +M ++G P V T T +++ + G+ D A QQM G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEAC 429
KP+ +YT F+ C G+ L+A +M+ E +P+ TYS ++ G G+ + A
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 430 DVVREMVKKGFFPTPVEINLLIQSLC--REGKMDGAK----------------KFMQECL 471
DV++ M G P+ LI+ L + GK G++ + +++ +
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Query: 472 NKGCAVNVVNFTSLIRGFCQKGDL------------------------------------ 495
N ++ LI G C+ G+L
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKH 812
Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
EA ++DDM P + +I L K G E T + +L G + ++ +
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKII 872
Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIE 590
I + G VE +L M K C+ + Y+ +IE
Sbjct: 873 IDGVGKQGLVEAFYELFNVM-EKNGCKFSSQTYSLLIE 909
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 145/323 (44%), Gaps = 6/323 (1%)
Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
M + G++ + L+ + G +A M + P+ T I +
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
L A + +M+ G++P++ TY+ LIKGY DL + A ++ M GC P + ++ +
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712
Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
++ +L + K K+ + ++ SN+ + EL+ +M + P+ +Y ++
Sbjct: 713 LIKHLLEMKYGKQ-KGSEPELCAMSNMM----EFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 347 NGFCRVGELDQAKKMLQQMY-HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
G C VG L A+K+ M + G P+ + + A L+ C K EA ++++
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
P + V++ GL ++G+ V + +++ G++ + ++I + ++G ++ +
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887
Query: 466 FMQECLNKGCAVNVVNFTSLIRG 488
GC + ++ LI G
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 257/509 (50%), Gaps = 31/509 (6%)
Query: 125 LQFF---YWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
+QFF + + W DP V+ + ++L L + A+RV M G+ ++ +
Sbjct: 158 VQFFDLLVYTYKDWG--SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNV 215
Query: 182 LMVAYSR-AGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLA 240
+ S+ K A+ V + V N+ N IH + ++ +A L M+L
Sbjct: 216 YLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK 275
Query: 241 GITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
G TP+V++Y+ ++ GYC + KLI+ M KG P+ Y +++G LC+
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR------- 328
Query: 301 RDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
++ EA+E ++M + G +PD V YT +++GFC+ G++ A K
Sbjct: 329 ----------------ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
+M+ P+ ++YTA ++G C G +EA ++ + + P+++T++ +++G
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
+ G + +A V M++ G P V LI LC+EG +D A + + E G N+
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
+ S++ G C+ G++EEA+ L+ + + DTVTYTT++DA K+G +++A E++ +M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYL 598
L KGL PT+VT+ +++ +C G +ED KLL ML+K T +N +++ C L
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 599 EEAGKILGKVLRTASKADASTCHVLVESY 627
+ A I + D T LV+ +
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 224/444 (50%), Gaps = 12/444 (2%)
Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
Y +++ + + + A +L LM +G ++S ++ Y R G+L ++ +M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
+ + PN I + I +L KLA+A M GI P+ + Y LI G+C I+
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----NDSNLFHD-- 316
A K EM + +PD ++Y ++ C+ + E L +M DS F +
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 317 -----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
G +++A + N M Q GC P+VVTYT +++G C+ G+LD A ++L +M+ G +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
PN +Y + +NGLC +G EA +++ E + +TY+ +M + G++ +A ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
++EM+ KG PT V N+L+ C G ++ +K + L KG A N F SL++ +C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
+ +L+ A ++ DM PD TY ++ K ++EA L +M KG +V T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 552 YRTVIHRYCQVGRVEDLLKLLEKM 575
Y +I + + + + ++ ++M
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQM 692
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 200/407 (49%), Gaps = 16/407 (3%)
Query: 297 IKEVRDLMEKMVN-------DS------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
++E R + EKM+N DS L D + A + + ++G +V +Y
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
V++ C++G + +A +L M G P+ +SY+ +NG C G+ + ++I + +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
PN+ Y ++ L R KL+EA + EM+++G P V LI C+ G + A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
KF E ++ +V+ +T++I GFCQ GD+ EA L +M+ +PD+VT+T +I+
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKC 581
K G +++A + M+ G P VVTY T+I C+ G ++ +LL +M + Q
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
YN ++ LC G +EEA K++G+ AD T L+++Y G A ++
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
M + L P + + L G E+ + L+ + +G I P +
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPNA 596
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 192/408 (47%), Gaps = 23/408 (5%)
Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
+ + +Y ++ +L + A+ M R+GI ++ L+ + + G +R A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
M + P++L I + +A + M G+ P+ +T+ LI GYC
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
+KDA ++ + M GCSP+ V+Y T++ LCKE
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE----------------------- 469
Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
G ++ A EL+++M ++G P++ TY ++VNG C+ G +++A K++ + G +TV+Y
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
T ++ C +G+ +A+E++ + P +T++V+M+G G L + ++ M+
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
KG P N L++ C + A ++ ++G + + +L++G C+ +++E
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
A L +M TY+ +I K + EA E+ +M +GL
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/529 (30%), Positives = 254/529 (48%), Gaps = 45/529 (8%)
Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY---VL 199
V+ ++++ S+ L A ++ L G P SY V + RN + V
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGF--MPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
M ++ V+PN+ N I + AL ++M+ G PNV+TYN LI GYC L
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
+I D KL+ M LKG P+ +SY V+ LC+E R+KEV ++
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL--------------- 298
Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
+M++ G D VTY ++ G+C+ G QA M +M HG P+ ++YT+
Sbjct: 299 --------TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
++ +C G A E ++ PN TY+ ++ G ++G ++EA V+REM G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
F P+ V N LI C GKM+ A +++ KG + +VV++++++ GFC+ D++EAL
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
+ +M PDT+TY+++I + R +EA +L +ML GL P TY +I+ Y
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 560 CQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
C G +E L+L +M+ K Y+ +I L EA ++L K+ S
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 618 STCHVLVESYLN---------------KGIPLLAYKVACRMFNRNLIPD 651
T H L+E+ N KG+ A +V M +N PD
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 241/531 (45%), Gaps = 48/531 (9%)
Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
+ Y +++ K + ++LR MA +G+E +++ ++ R G+++ +VL+
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300
Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
M + + + + NT I +AL M G+TP+V+TY LI C
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
+ A++ +D+M ++G P++ +Y T++ + F +G +
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLV-----------------------DGFSQKGYMN 397
Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
EA ++ +M+ G P VVTY A++NG C G+++ A +L+ M G P+ VSY+ L
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 382 NGLCHNGKSLEA----REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
+G C + EA REM+ E+ P+ ITYS ++ G + + EACD+ EM++
Sbjct: 458 SGFCRSYDVDEALRVKREMV----EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
G P LI + C EG ++ A + E + KG +VV ++ LI G ++ E
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSK---------------NGRVEEATELMMKMLS 542
A LL ++ + P VTY T+I+ S G + EA ++ ML
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLG 633
Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV--IENLCSFGYLEE 600
K P Y +IH +C+ G + L ++M+ + ++ L G + E
Sbjct: 634 KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
++ VLR+ ++A VLVE +G + V M +P+
Sbjct: 694 LNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 205/436 (47%), Gaps = 24/436 (5%)
Query: 249 YNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV 308
++ ++K Y L I A+ ++ G P +SY V+ + KR
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR------------ 184
Query: 309 NDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
I A+ + +M + P+V TY ++ GFC G +D A + +M
Sbjct: 185 ----------NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETK 234
Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
GC PN V+Y ++G C K + +++ + + PN I+Y+VV++GL REG++ E
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294
Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
V+ EM ++G+ V N LI+ C+EG A E L G +V+ +TSLI
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
C+ G++ A+ LD M + P+ TYTT++D S+ G + EA ++ +M G P+
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILG 606
VVTY +I+ +C G++ED + +LE M K +Y+ V+ C ++EA ++
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
+++ K D T L++ + + A + M L PD + +EG
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 667 KSEEADTLMLRFVERG 682
E+A L VE+G
Sbjct: 535 DLEKALQLHNEMVEKG 550
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 165/362 (45%), Gaps = 14/362 (3%)
Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE-A 393
C + VV + R+ +D+A ++ HG P +SY A L+ + +++ A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
+ E +PN TY++++ G G + A + +M KG P V N LI
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
C+ K+D K ++ KG N++++ +I G C++G ++E +L +M D
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
VTY T+I K G +A + +ML GL P+V+TY ++IH C+ G + ++ L+
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 574 KMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
+M + C Y +++ GY+ EA ++L ++ T + L+ + G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG-----KSEEADTLMLRFVERGHIQP 686
A V M + L PD+ VS +L G +EA + VE+G I+P
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDV-----VSYSTVLSGFCRSYDVDEALRVKREMVEKG-IKP 483
Query: 687 KS 688
+
Sbjct: 484 DT 485
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 175/402 (43%), Gaps = 62/402 (15%)
Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
I Y ++ + K A L M RG+ ++ L+ +S+ G + A VL
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
M +P+++ N I+ V K+ A+ LE M+ G++P+V++Y+ ++ G+C +
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---------- 311
+ +A+++ EM KG PD ++Y +++ C+++R KE DL E+M+
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 312 --NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNG--------------------- 348
N + +G +E+A +L N+M + G +PDVVTY+ ++NG
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 349 -----------------------------FCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
FC G + +A ++ + M KP+ +Y
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
++G C G +A + + + + +T ++ L +EGK++E V+ +++
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSC 705
Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
+ +L++ REG MD + E G N ++
Sbjct: 706 ELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 133/306 (43%), Gaps = 8/306 (2%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
D + Y +L ++ A RV R M +GI+ +S L+ + + + A +
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
M + + P+ I+ + L KAL+ M G+ P+V+TY+ LI G
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
R ++A +L+ ++ + P V+Y+T++ C K V L++ F +G
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVSLIKG-------FCMKGM 620
Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
+ EA ++ M PD Y +++G CR G++ +A + ++M G +TV+ A
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA 680
Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
+ L GK E +I A V++ REG + DV+ EM K G
Sbjct: 681 LVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740
Query: 440 FFPTPV 445
F P +
Sbjct: 741 FLPNGI 746
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 239 bits (609), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 249/481 (51%), Gaps = 52/481 (10%)
Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
R+G ++++L M + P++++C I + KA+R +E ++ G P+V
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
YN LI G+C ++RI DA +++D M K SPD V+Y ++G LC ++ ++ ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 308 VNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGEL 355
++D+ +G ++EA +L+++M G PD+ TY ++ G C+ G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
D+A +M++ + GC+P+ +SY L L + GK E +++ E PN +TYS++
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
+ L R+GK+ EA ++++ M +KG P + LI + CREG++D A +F++ ++ GC
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLD-------------------------------- 503
++VN+ +++ C+ G ++AL +
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 504 ---DMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
+M DPD +TY ++I L + G V+EA EL++ M S P+VVTY V+ +C
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519
Query: 561 QVGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
+ R+ED + +LE M+ CR T Y +IE + GY EA ++ ++R + ++
Sbjct: 520 KAHRIEDAINVLESMVG-NGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEY 578
Query: 618 S 618
S
Sbjct: 579 S 579
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 197/409 (48%), Gaps = 12/409 (2%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
D Y ++ K A RVL M + ++ ++ + GKL A+ VL
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
+ + P ++ I ++ + +AL+ ++ M G+ P++ TYN +I+G C
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DSNLFH- 315
+ A +++ + LKGC PD +SY ++ L + + +E LM KM + D N+
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 316 --------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
G+IEEA L+ M + G PD +Y ++ FCR G LD A + L+ M
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
GC P+ V+Y L LC NGK+ +A E+ E +PN+ +Y+ + L G
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
A ++ EM+ G P + N +I LCREG +D A + + + + +VV + ++
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATEL 536
GFC+ +E+A+++L+ M P+ TYT +I+ + G EA EL
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 180/343 (52%), Gaps = 4/343 (1%)
Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
PDV Y A++NGFC++ +D A ++L +M P+TV+Y + LC GK A ++
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
+N + P ITY++++ EG + EA ++ EM+ +G P N +I+ +C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
EG +D A + ++ KGC +V+++ L+R +G EE L+ M+ K DP+ VT
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
Y+ +I L ++G++EEA L+ M KGL P +Y +I +C+ GR++ ++ LE M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 577 SKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
S C YN V+ LC G ++A +I GK+ ++S+ + + + + G
Sbjct: 396 S-DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 634 LLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLML 676
+ A + M + + PD + L EG +EA L++
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 148/314 (47%), Gaps = 16/314 (5%)
Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
+ D Y ++ + K + A ++R + +G C P+ SY L+ A GK
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG--CEPDVISYNILLRALLNQGKWEEG 317
Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
+++ M PN++ + I L K+ +A+ L+ M+ G+TP+ +Y+ LI
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------VN 309
+C R+ AI+ ++ M GC PD V+Y TV+ LCK + + ++ K+ N
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 310 DSNL------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
S+ G A ++ +M G PD +TY ++++ CR G +D+A ++L
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
M P+ V+Y L G C + +A ++ + PN TY+V++ G+ G
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Query: 424 KLSEACDVVREMVK 437
+EA ++ ++V+
Sbjct: 558 YRAEAMELANDLVR 571
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 137/270 (50%), Gaps = 3/270 (1%)
Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
+ H R G E+ ++ MV+KG+ P + LI+ + A + M E L K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153
Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
+V + +LI GFC+ +++A +LD M PDTVTY +I +L G+++ A
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
+++ ++LS PTV+TY +I G V++ LKL+++MLS+ + YN +I +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 593 CSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
C G ++ A +++ + + D + ++L+ + LN+G K+ +MF+ P++
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 653 KLCKKVSERLILEGKSEEADTLMLRFVERG 682
+ L +GK EEA L+ E+G
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 5/270 (1%)
Query: 385 CHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTP 444
C +G +E+ ++ T + + P+ I + ++ G + +A V+ E+++K P
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
N LI C+ ++D A + + +K + + V + +I C +G L+ AL +L+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
+ P +TYT +I+A G V+EA +LM +MLS+GL P + TY T+I C+ G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 565 VEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCH 621
V+ +++ L + C +YN ++ L + G EE K++ K+ + T
Sbjct: 279 VDRAFEMVRN-LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 622 VLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
+L+ + G A + M + L PD
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/433 (31%), Positives = 233/433 (53%), Gaps = 21/433 (4%)
Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAG----ITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
N+ ++V++ + L F + + + I+PN L++N +IK C L + AI++
Sbjct: 152 NSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFR 211
Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--------NLFHD----QG 318
MP + C PD +Y T+M LCKE+RI E L+++M ++ N+ D +G
Sbjct: 212 GMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKG 271
Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
+ +LV+ M GC+P+ VTY +++G C G+LD+A +L++M C PN V+Y
Sbjct: 272 DLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYG 331
Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
+NGL ++ +A ++++ EE + N YSV++ GL +EGK EA + R+M +K
Sbjct: 332 TLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK 391
Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
G P V ++L+ LCREGK + AK+ + + GC N ++SL++GF + G EEA
Sbjct: 392 GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
+ + +M + Y+ +ID L GRV+EA + KML+ G+ P V Y ++I
Sbjct: 452 VQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKG 511
Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRT-----AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
C +G ++ LKL +ML +++ ++ YN +++ LC + A +L +L
Sbjct: 512 LCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGC 571
Query: 614 KADASTCHVLVES 626
D TC+ + +
Sbjct: 572 DPDVITCNTFLNT 584
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 220/499 (44%), Gaps = 75/499 (15%)
Query: 124 ALQFF-YWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFS 180
L+F+ Y + P + + ++++ L K + A V R M R +C P+ ++
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPER--KCLPDGYT 224
Query: 181 Y--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
Y LM + ++ A+ +L MQ +P+ +I N I L L + + ++ M
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
L G PN +TYN LI G C ++ A+ L++ M C P+ V+Y T++ L K++R
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 299 EVRDLMEKM-------------VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
+ L+ M V S LF +G+ EEA L +M++ GC P++V Y+ +
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFK-EGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
V+G CR G+ ++AK++L +M GC PN +Y++ + G G EA ++ ++
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI------------------ 447
+ N YSV++ GL G++ EA V +M+ G P V
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523
Query: 448 --------------------NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
N+L+ LC + + A + L++GC +V+ + +
Sbjct: 524 LYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Query: 488 GFCQKGD-LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
+K + ++ S L+++ + L K RV A ++ ML K L
Sbjct: 584 TLSEKSNSCDKGRSFLEELVV---------------RLLKRQRVSGACTIVEVMLGKYLA 628
Query: 547 PTVVTYRTVIHRYCQVGRV 565
P T+ ++ C+ ++
Sbjct: 629 PKTSTWAMIVREICKPKKI 647
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 181/378 (47%), Gaps = 9/378 (2%)
Query: 279 PDK---VSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
PDK + + V + CK + +K ++ ++N+ L+H +E +VN M
Sbjct: 128 PDKAVDLFHRMVDEFRCK-RSVKSFNSVLNVIINEG-LYHRG--LEFYDYVVNSNMNMNI 183
Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
P+ +++ V+ C++ +D+A ++ + M C P+ +Y ++GLC + EA
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
+++ + E +P+ + Y+V++ GL ++G L+ +V M KG P V N LI LC
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303
Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
+GK+D A ++ ++ C N V + +LI G ++ +A+ LL M +
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 363
Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
Y+ +I L K G+ EEA L KM KG P +V Y ++ C+ G+ + ++L +M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 576 LSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIP 633
++ AY + +++ G EEA ++ ++ +T + VL++ G
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 634 LLAYKVACRMFNRNLIPD 651
A V +M + PD
Sbjct: 484 KEAMMVWSKMLTIGIKPD 501
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 183/393 (46%), Gaps = 17/393 (4%)
Query: 294 EKRIKEVRDLMEKMVNDSNL------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
EK K + + DS L + + G + ++L++++ + ++ V
Sbjct: 61 EKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFR 120
Query: 348 GFCRVGELDQAKKMLQQMY-HHGCKPNTVSYTAFLN-----GLCHNGKSLEARE-MINTS 400
+ + D+A + +M CK + S+ + LN GL H G LE + ++N++
Sbjct: 121 AYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRG--LEFYDYVVNSN 178
Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
+PN +++++V+ L + + A +V R M ++ P L+ LC+E ++
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
D A + E ++GC+ + V + LI G C+KGDL L+D+M+L P+ VTY T+
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK-- 578
I L G++++A L+ +M+S +P VTY T+I+ + R D ++LL M +
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 579 QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYK 638
+ Y+ +I L G EEA + K+ K + VLV+ +G P A +
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 639 VACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
+ RM +P+ + + G EEA
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 151/337 (44%), Gaps = 29/337 (8%)
Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
+ Y ++ L K + A R+L M RG +S L+ + GK AM +
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK 387
Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
M + PN+++ + + L K +A L RM +G PN TY+ L+KG+
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNLFHD 316
++A+++ EM GCS +K Y ++ LC R+KE + KM+ D+ +
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 317 Q-------GRIEEAKELVNQM---SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
G ++ A +L ++M + PDVVTY +++G C ++ +A +L M
Sbjct: 508 IIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSML 567
Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
GC P+ ++ FLN L S + + +V+ L+R+ ++S
Sbjct: 568 DRGCDPDVITCNTFLNTLSEKSNSCDKGR-------------SFLEELVVRLLKRQ-RVS 613
Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
AC +V M+ K P ++++ +C+ K++ A
Sbjct: 614 GACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 2/214 (0%)
Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
+N + N ++F +I+ C+ ++ A+ + M K PD TY T++D L K R+
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQV 588
+EA L+ +M S+G P+ V Y +I C+ G + + KL++ M K YN +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNL 648
I LC G L++A +L +++ + + T L+ + + A ++ M R
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 649 IPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
+ + + L EGK+EEA +L + E+G
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 12/218 (5%)
Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD------PDTVTYTTIIDALSKNG 528
C +V +F S++ +G L D Y+ + P+ +++ +I AL K
Sbjct: 144 CKRSVKSFNSVLNVIINEGLYHRGLEFYD--YVVNSNMNMNISPNGLSFNLVIKALCKLR 201
Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA---Y 585
V+ A E+ M + +P TY T++ C+ R+++ + LL++M S + C + Y
Sbjct: 202 FVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS-EGCSPSPVIY 260
Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
N +I+ LC G L K++ + + T + L+ KG A + RM +
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
IP+ + L+ + ++ +A L+ ERG+
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 226 bits (575), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 141/510 (27%), Positives = 243/510 (47%), Gaps = 16/510 (3%)
Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
Q R I + + ++KTK + + + M +GI S ++ + R KL
Sbjct: 81 QSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLS 140
Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
A + + K P+ +I NT ++ L + ++++AL ++RM G P ++T N L+
Sbjct: 141 YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLV 200
Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
G C ++ DA+ LID M G P++V+Y V+ +CK + +L+ KM + N+
Sbjct: 201 NGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM-EERNI 259
Query: 314 FHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
D G ++ A L N+M G D++TY ++ GFC G D K
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
+L+ M PN V+++ ++ GK EA +++ + PN ITY+ ++ G
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
+E +L EA +V M+ KG P + N+LI C+ ++D + +E +G N V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
+ +L++GFCQ G LE A L +M + PD V+Y ++D L NG +E+A E+ K+
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYL 598
+ + Y +IH C +V+D L + K + AYN +I LC L
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYL 628
+A + K+ D T ++L+ ++L
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHL 589
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/533 (26%), Positives = 261/533 (48%), Gaps = 53/533 (9%)
Query: 169 RRGIECRPEA----FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
R I+ RP F+ L A ++ + + + M+ +A ++ + I+
Sbjct: 77 RDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRC 136
Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
KL+ A + ++ G P+ + +N L+ G C R+ +A++L+D M G P ++
Sbjct: 137 RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITL 196
Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
T++ LC G++ +A L+++M + G P+ VTY
Sbjct: 197 NTLVNGLCL-----------------------NGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
V+N C+ G+ A ++L++M K + V Y+ ++GLC +G A + N E +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
+ + ITY+ ++ G G+ + ++R+M+K+ P V ++LI S +EGK+ A
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
+ ++E + +G A N + + SLI GFC++ LEEA+ ++D M DPD +T+ +I+
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR-- 582
K R+++ EL +M +G++ VTY T++ +CQ G++E KL ++M+S+ + R
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR-RVRPD 472
Query: 583 -TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK----------- 630
+Y +++ LC G LE+A +I GK+ ++ + D +++ N
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
+PL K+ R +N I +LC+K S +AD L + E GH
Sbjct: 533 SLPLKGVKLDARAYN---IMISELCRKDS--------LSKADILFRKMTEEGH 574
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 186/386 (48%), Gaps = 23/386 (5%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
D + Y ++++ L K A + M +G + ++ L+ + AG+ + +L
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
M K ++PN++ + I V KL +A + L+ M GI PN +TYN LI G+C
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
+R+++AI+++D M KGC PD +++ ++ CK R
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK-----------------------ANR 418
Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
I++ EL +MS G I + VTY +V GFC+ G+L+ AKK+ Q+M +P+ VSY
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
L+GLC NG+ +A E+ E+ + Y +++HG+ K+ +A D+ + KG
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
N++I LCR+ + A ++ +G A + + + LIR D A
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALS 525
L+++M D T +I+ LS
Sbjct: 599 ELIEEMKSSGFPADVSTVKMVINMLS 624
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 146/329 (44%), Gaps = 2/329 (0%)
Query: 356 DQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
D A + + M P + + + + + + E + + T S++
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGC 475
++ R KLS A + +++K G+ P V N L+ LC E ++ A + + + G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 476 AVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATE 535
++ +L+ G C G + +A+ L+D M P+ VTY +++ + K+G+ A E
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
L+ KM + + V Y +I C+ G +++ L +M K + YN +I C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
+ G ++ K+L +++ + T VL++S++ +G A ++ M R + P+
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERG 682
+ + E + EEA ++ + +G
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 132/346 (38%), Gaps = 82/346 (23%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
++ D I Y ++ ++LR M +R I FS L+ ++ + GKLR A
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
+L M + +APN + N+ I N+L +A++ ++ M G P+++T+N LI GY
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 257 CDLHRIKDAI-----------------------------------KLIDEMPLKGCSPDK 281
C +RI D + KL EM + PD
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 282 VSYYTVMGYLCKEKRIKEVRDLMEKM------------------------VNDS-NLFHD 316
VSY ++ LC +++ ++ K+ V+D+ +LF
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 317 ----------------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
+ + +A L +M++ G PD +TY ++ +
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593
Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
A +++++M G + + +N L +M++T+
Sbjct: 594 ATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTT 639
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%)
Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
R R D + Y ++L+ L + A + + + +E + ++ A K+ +A
Sbjct: 468 RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
+ + V + N I L + L+KA +M G P+ LTYN LI+
Sbjct: 528 WDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
+ A +LI+EM G D + V+ L + K D++
Sbjct: 588 HLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDML 636
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/565 (25%), Positives = 261/565 (46%), Gaps = 32/565 (5%)
Query: 115 LRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIEC 174
LR ++ +AL FF ++H P+ + +M+ L+ + +L+ M +G C
Sbjct: 50 LRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC 109
Query: 175 RPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFL 234
+ F ++ Y + G A+ + +++ P++ I N + L+ N++
Sbjct: 110 SEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY 169
Query: 235 ERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKE 294
M+ G PNV TYN L+K C +++ A KL+ EM KGC PD VSY TV+ +C+
Sbjct: 170 RDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV 229
Query: 295 KRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
+KE R+L E R E P V Y A++NG C+ +
Sbjct: 230 GLVKEGRELAE-------------RFE---------------PVVSVYNALINGLCKEHD 261
Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
A +++++M G PN +SY+ +N LC++G+ A + + PN T S
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS 321
Query: 415 VMHGLRREGKLSEACDVVREMVKK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
++ G G +A D+ +M++ G P V N L+Q C G + A
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI 381
Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
GC+ N+ + SLI GF ++G L+ A+ + + M P+ V YT +++AL ++ + +EA
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441
Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR---TAYNQVIE 590
L+ M + P+V T+ I C GR++ K+ +M + +C YN++++
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501
Query: 591 NLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
L +EEA + ++ + +ST + L+ N G+P +A ++ +M P
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561
Query: 651 DLKLCKKVSERLILEGKSEEADTLM 675
D + +GK+E A ++
Sbjct: 562 DEITMNMIILAYCKQGKAERAAQML 586
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 181/425 (42%), Gaps = 62/425 (14%)
Query: 308 VNDSNLFHDQGRIEEAKEL--VNQMSQMGCIP-----------------DVVTYTAVVNG 348
+N ++L + E KEL V ++ Q C+P +T+ ++
Sbjct: 26 LNVNHLLTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRK 85
Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
G++D + +LQQM G + + + ++ G + A EM +E P+
Sbjct: 86 LAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPS 145
Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
Y+ V+ L E ++ V R+M + GF P N+L+++LC+ K+DGAKK +
Sbjct: 146 VKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLV 205
Query: 469 ECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNG 528
E NKGC + V++T++I C+ G ++E L + + +P Y +I+ L K
Sbjct: 206 EMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE-----RFEPVVSVYNALINGLCKEH 260
Query: 529 RVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK---------- 578
+ A ELM +M+ KG+ P V++Y T+I+ C G++E L +ML +
Sbjct: 261 DYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLS 320
Query: 579 ----------------------------QKCRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
Q AYN +++ CS G + +A + +
Sbjct: 321 SLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380
Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
+ T L+ + +G A + +M P++ + + E L K +E
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE 440
Query: 671 ADTLM 675
A++L+
Sbjct: 441 AESLI 445
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 134/309 (43%), Gaps = 39/309 (12%)
Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFP-TPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
V+ LR+E + A + + F TP+ ++I+ L +G++D + +Q+ +
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105
Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSL-------------------LDDM--------- 505
G + F S+I + Q G E A+ + LD +
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMI 165
Query: 506 YLCKKD-------PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
Y+ +D P+ TY ++ AL KN +V+ A +L+++M +KG P V+Y TVI
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Query: 559 YCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
C+VG V++ +L E+ + + YN +I LC + A +++ +++ +
Sbjct: 226 MCEVGLVKEGRELAERF---EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282
Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
+ L+ N G LA+ +M R P++ + + L G + +A L +
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 679 VERGHIQPK 687
+ +QP
Sbjct: 343 IRGFGLQPN 351
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 236/467 (50%), Gaps = 25/467 (5%)
Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
M GI +S L+ + R +L A+ VL M K PN++ ++ ++ +
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
+++A+ +++M + G PN +T+N LI G ++ +A+ LID M KGC PD V+Y
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
V+ LCK +L+ KM +QG++E P V+ Y ++
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKM--------EQGKLE---------------PGVLIYNTII 263
Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
+G C+ +D A + ++M G +PN V+Y++ ++ LC+ G+ +A +++ E
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
P+ T+S ++ +EGKL EA + EMVK+ P+ V + LI C ++D AK+
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
+ ++K C +VV + +LI+GFC+ +EE + + +M +TVTY +I L +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--A 584
G + A E+ +M+S G+ P ++TY T++ C+ G++E + + E + + T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
YN +IE +C G +E+ + + K D + ++ + KG
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/510 (27%), Positives = 254/510 (49%), Gaps = 21/510 (4%)
Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
H+ Y +++ + A VL M + G E S L+ Y + ++ A+ +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
+ M PN + NT IH L + NK ++A+ ++RM G P+++TY ++ G C
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VN 309
A L+++M P + Y T++ LCK K + + +L ++M V
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 310 DSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
S+L + GR +A L++ M + PDV T++A+++ F + G+L +A+K+ +M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
P+ V+Y++ +NG C + + EA++M + P+ +TY+ ++ G + ++
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
E +V REM ++G V N+LIQ L + G D A++ +E ++ G N++ + +L+
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
G C+ G LE+A+ + + + K +P TY +I+ + K G+VE+ +L + KG+
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM-----LSKQKCRTAYNQVIENLCSFGYLEEA 601
P VV Y T+I +C+ G E+ L ++M L C YN +I G E +
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC---YNTLIRARLRDGDREAS 590
Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKG 631
+++ ++ DAST LV + L+ G
Sbjct: 591 AELIKEMRSCGFAGDASTIG-LVTNMLHDG 619
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 244/512 (47%), Gaps = 15/512 (2%)
Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
KL +A+ + M K+ P+++ + + + NK + E+MQ GI N TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--- 307
LI +C ++ A+ ++ +M G P+ V+ +++ C KRI E L+++M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 308 ------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
V + L H + EA L+++M GC PD+VTY VVNG C+ G+ D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
+L +M +P + Y ++GLC +A + E + PN +TYS ++
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
L G+ S+A ++ +M+++ P + LI + +EGK+ A+K E + + +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
+V ++SLI GFC L+EA + + M PD VTY T+I K RVEE E+
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFG 596
+M +GLV VTY +I Q G + ++ ++M+S YN +++ LC G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
LE+A + + R+ + T ++++E G + + C + + + PD+
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
+ +G EEAD L E G + P S
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTL-PNS 571
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 214/436 (49%), Gaps = 18/436 (4%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
Y+ + + + ++ L A ++ M +G C+P+ +Y +V + G
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG--CQPDLVTYGVVVNGLCKRGDTDL 239
Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
A +L+ M++ + P +LI NT I L + AL + M+ GI PNV+TY+ LI
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS--- 311
C+ R DA +L+ +M + +PD ++ ++ KE ++ E L ++MV S
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 312 ---------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
N F R++EAK++ M C PDVVTY ++ GFC+ +++ ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
++M G NTV+Y + GL G A+E+ + PN +TY+ ++ GL +
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM-DGAKKFMQECLNKGCAVNVVN 481
GKL +A V + + PT N++I+ +C+ GK+ DG F L KG +VV
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGVKPDVVA 538
Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
+ ++I GFC+KG EEA +L +M P++ Y T+I A ++G E + EL+ +M
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Query: 542 SKGLVPTVVTYRTVIH 557
S G T V +
Sbjct: 599 SCGFAGDASTIGLVTN 614
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 161/336 (47%), Gaps = 13/336 (3%)
Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
R + + Y ++ L A R+L M R I FS L+ A+ + GKL A
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
+ M K ++ P+++ ++ I+ + ++L +A + E M P+V+TYN LIKG+C
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
R+++ +++ EM +G + V+Y ++ L + +++ ++MV+D
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 312 --NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
N D G++E+A + + + P + TY ++ G C+ G+++ + +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
G KP+ V+Y ++G C G EA + +E+ PN+ Y+ ++ R+G
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587
Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
+ ++++EM GF I L+ ++ +G++D
Sbjct: 588 EASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLD 622
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 131/302 (43%), Gaps = 38/302 (12%)
Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
E KL +A + EMVK FP+ +E + L+ ++ + K D ++ N G N
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
++ LI FC++ L AL++L M +P+ VT +++++ + R+ EA L+ +M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--------------QKCRTA--- 584
G P VT+ T+IH + + + L+++M++K C+
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 585 --------------------YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
YN +I+ LC + ++++A + ++ + + T L+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 625 ESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
N G A ++ M R + PD+ + + + EGK EA+ L V+R I
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS-I 357
Query: 685 QP 686
P
Sbjct: 358 DP 359
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 230/469 (49%), Gaps = 27/469 (5%)
Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
M GI +S L+ + R +L A+ VL+ M K P+++ N+ ++ GN+
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
++ A+ + +M G P+ T+N LI G +R +A+ L+D M +KGC PD V+Y
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
V+ LCK I L++KM +QG+IE P VV Y ++
Sbjct: 227 VVNGLCKRGDIDLALSLLKKM--------EQGKIE---------------PGVVIYNTII 263
Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
+ C ++ A + +M + G +PN V+Y + + LC+ G+ +A +++ E
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
PN +T+S ++ +EGKL EA + EM+K+ P + LI C ++D AK
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
+ ++K C NVV + +LI+GFC+ ++E + L +M +TVTYTT+I +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--- 583
+ A + +M+S G++P ++TY ++ C G+VE L + E L + K
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE-YLQRSKMEPDIY 502
Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
YN +IE +C G +E+ + + K + T ++ + KG+
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/515 (26%), Positives = 247/515 (47%), Gaps = 26/515 (5%)
Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
FS L+ A ++ K + + MQ ++ NL + I+ ++L+ AL L +M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
G P+++T N L+ G+C +RI DA+ L+ +M G PD ++ T++ L +
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR----- 198
Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
R EA LV++M GC PD+VTY VVNG C+ G++D A
Sbjct: 199 ------------------HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
+L++M +P V Y ++ LC+ +A + + + PN +TY+ ++
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
L G+ S+A ++ +M+++ P V + LI + +EGK+ A+K E + + +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
+ ++SLI GFC L+EA + + M P+ VTY T+I K RV+E EL
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFG 596
+M +GLV VTY T+IH + Q ++ + ++M+S Y+ +++ LC+ G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
+E A + + R+ + D T ++++E G + + C + + + P++
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
+ +G EEAD L E G + P S +
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTY 574
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 219/449 (48%), Gaps = 12/449 (2%)
Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
H+ Y +++ + A VL M + G E + L+ + ++ +A+ +
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
+ M + P+ NT IH L N+ ++A+ ++RM + G P+++TY ++ G C
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
I A+ L+ +M P V Y T++ LC K + + +L +M N
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
+ GR +A L++ M + P+VVT++A+++ F + G+L +A+K+ +M
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
P+ +Y++ +NG C + + EA+ M + PN +TY+ ++ G + ++
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
E ++ REM ++G V LI + + D A+ ++ ++ G +++ ++ L+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
G C G +E AL + + + K +PD TY +I+ + K G+VE+ +L + KG+
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
P VVTY T++ +C+ G E+ L +M
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREM 562
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 209/448 (46%), Gaps = 30/448 (6%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
Y+ D + ++ L + A ++ M +G C+P+ +Y +V + G +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG--CQPDLVTYGIVVNGLCKRGDIDL 239
Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
A+ +L M++ + P ++I NT I L + AL M GI PNV+TYN LI+
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
C+ R DA +L+ +M + +P+ V++ ++ KE
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE-------------------- 339
Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
G++ EA++L ++M + PD+ TY++++NGFC LD+AK M + M C PN
Sbjct: 340 ---GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
V+Y + G C + E E+ + N +TY+ ++HG + + A V ++
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
MV G P + ++L+ LC GK++ A + ++ + +I G C+ G
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
+E+ L + L P+ VTYTT++ + G EEA L +M +G +P TY T
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCR 582
+I + + G +L+ +M S CR
Sbjct: 577 LIRAHLRDGDKAASAELIREMRS---CR 601
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 169/357 (47%), Gaps = 16/357 (4%)
Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
AL F D + R + + Y ++ L A R+L M R I FS L+
Sbjct: 275 ALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
A+ + GKL A + M K ++ P++ ++ I+ + ++L +A E M
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
PNV+TYN LIKG+C R+ + ++L EM +G + V+Y T++ + + + +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 304 MEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
++MV+D L + G++E A + + + PD+ TY ++ G C+
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
G+++ + + G KPN V+YT ++G C G EA + +EE P++ T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
Y+ ++ R+G + + +++REM F I L+ ++ +G++D K F++
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLD--KSFLK 627
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 2/301 (0%)
Query: 354 ELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYS 413
+LD A + M P+ V ++ L+ + K + + + N TYS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 414 VVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
++++ R +LS A V+ +M+K G+ P V +N L+ C ++ A + + +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
G + F +LI G + EA++L+D M + PD VTY +++ L K G ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIEN 591
L+ KM + P VV Y T+I C V D L L +M +K + YN +I
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
LC++G +A ++L ++ + T L+++++ +G + A K+ M R++ PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 652 L 652
+
Sbjct: 361 I 361
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 147/510 (28%), Positives = 238/510 (46%), Gaps = 14/510 (2%)
Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
Q R PI + + +++TK + M GIE + ++ Y R KL
Sbjct: 63 QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLL 122
Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
A VL K P+ + +T ++ + ++++A+ ++RM P+++T + LI
Sbjct: 123 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI 182
Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM------ 307
G C R+ +A+ LID M G PD+V+Y V+ LCK DL KM
Sbjct: 183 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 242
Query: 308 --VNDSNLFHDQ----GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
V ++ D G ++A L N+M G DVVTY++++ G C G+ D KM
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
L++M P+ V+++A ++ GK LEA+E+ N P+ ITY+ ++ G +
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
E L EA + MV KG P V ++LI S C+ ++D + +E +KG N +
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
+ +L+ GFCQ G L A L +M P VTY ++D L NG + +A E+ KM
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLE 599
+ + Y +IH C +V+D L + K + YN +I LC G L
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLN 629
EA + K+ D T ++L+ ++L
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRAHLG 572
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 246/506 (48%), Gaps = 14/506 (2%)
Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
K+ +A+ + M ++ P + N + + L F + M+L GI ++ T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-- 308
+I YC ++ A ++ G PD +++ T++ C E R+ E L+++MV
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 309 -------NDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
S L + +GR+ EA L+++M + G PD VTY V+N C+ G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
+ ++M K + V Y+ ++ LC +G +A + N E + + +TYS ++ G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
L +GK + ++REM+ + P V + LI +EGK+ AK+ E + +G A +
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
+ + SLI GFC++ L EA + D M +PD VTY+ +I++ K RV++ L
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
++ SKGL+P +TY T++ +CQ G++ +L ++M+S+ Y +++ LC G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
L +A +I K+ ++ ++++ N A+ + C + ++ + PD+
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 657 KVSERLILEGKSEEADTLMLRFVERG 682
+ L +G EAD L + E G
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 181/382 (47%), Gaps = 23/382 (6%)
Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
Y ++++ L K A + M +GI+ +S L+ GK + +L M
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
+ P+++ + I V V KL +A M GI P+ +TYN LI G+C + +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEA 323
+A ++ D M KGC PD V+Y ++ CK KR+ ++
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV-----------------------DDG 404
Query: 324 KELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNG 383
L ++S G IP+ +TY +V GFC+ G+L+ AK++ Q+M G P+ V+Y L+G
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 384 LCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPT 443
LC NG+ +A E+ ++ T Y++++HG+ K+ +A + + KG P
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 444 PVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLD 503
V N++I LC++G + A ++ GC + + LIR L ++ L++
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 504 DMYLCKKDPDTVTYTTIIDALS 525
+M +C D+ T +ID LS
Sbjct: 585 EMKVCGFSADSSTIKMVIDMLS 606
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 71/164 (43%)
Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
+ Y ++L+ L A + M + + ++ ++ A K+ +A +
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
+ V P+++ N I L L++A +M+ G TP+ TYN LI+ +
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
+ +++LI+EM + G S D + V+ L + K D++
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDMLS 619
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 153/566 (27%), Positives = 267/566 (47%), Gaps = 25/566 (4%)
Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLR 165
L P+ + AV++ Q D AL+ F ++ ++H Y ++E L + + VL
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64
Query: 166 LMARR-GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
M G + M Y R GK++ A+ V M P + N + VLV
Sbjct: 65 DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS 124
Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
+A + RM+ GITP+V ++ +K +C R A++L++ M +GC + V+Y
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQ 332
TV+G +E E +L KM+ + +G ++E ++L++++ +
Sbjct: 185 CTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK 244
Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
G +P++ TY + G C+ GELD A +M+ + G KP+ ++Y + GLC N K E
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
A + E P++ TY+ ++ G + G + A +V + V GF P LI
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
LC EG+ + A E L KG NV+ + +LI+G +G + EA L ++M P
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIP 424
Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
+ T+ +++ L K G V +A L+ M+SKG P + T+ +IH Y ++E+ L++L
Sbjct: 425 EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL 484
Query: 573 EKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY--- 627
+ ML YN ++ LC E+ + ++ + T ++L+ES
Sbjct: 485 DVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544
Query: 628 --LNKGIPLLAYKVACRMFNRNLIPD 651
L++ + LL M N+++ PD
Sbjct: 545 RKLDEALGLLE-----EMKNKSVNPD 565
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 141/561 (25%), Positives = 263/561 (46%), Gaps = 17/561 (3%)
Query: 141 PIVYYMMLEILS--KTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
P VY + + S KT A R+L M+ +G E A+ ++ + +
Sbjct: 144 PDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYEL 203
Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
M + V+ L N + VL + + + L+++ G+ PN+ TYN I+G C
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQ 263
Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN-----DSNL 313
+ A++++ + +G PD ++Y ++ LCK + +E + KMVN DS
Sbjct: 264 RGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYT 323
Query: 314 FHD-------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
++ G ++ A+ +V G +PD TY ++++G C GE ++A + +
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
G KPN + Y + GL + G LEA ++ N E+ P T++++++GL + G +S
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
+A +V+ M+ KG+FP N+LI + KM+ A + + L+ G +V + SL+
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
G C+ E+ + M P+ T+ ++++L + +++EA L+ +M +K +
Sbjct: 504 NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 563
Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGK 603
P VT+ T+I +C+ G ++ L KM K ++ YN +I + A K
Sbjct: 564 PDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEK 623
Query: 604 ILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLI 663
+ +++ D T ++V+ + G L YK M IP L +V L
Sbjct: 624 LFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLC 683
Query: 664 LEGKSEEADTLMLRFVERGHI 684
+E + EA ++ R V++G +
Sbjct: 684 VEDRVYEAAGIIHRMVQKGLV 704
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 225/492 (45%), Gaps = 52/492 (10%)
Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQK 204
+L +L K + +++L + +RG+ P F+Y + + G+L A+ ++ + +
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGV--LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
P+++ N I+ L +K +A +L +M G+ P+ TYN LI GYC ++
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339
Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------N 312
A +++ + G PD+ +Y +++ LC E L + +
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 313 LFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP 372
+QG I EA +L N+MS+ G IP+V T+ +VNG C++G + A +++ M G P
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459
Query: 373 NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
+ ++ ++G K A E+++ + P+ TY+ +++GL + K + +
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
+ MV+KG P N+L++SLCR K+D A ++E NK + V F +LI GFC+
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 493 GDLEEALSLLDDMYLCKK------------------------------------DPDTVT 516
GDL+ A +L M K PD T
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
Y ++D K G V + +++M+ G +P++ T VI+ C RV + ++ +M+
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699
Query: 577 SKQKCRTAYNQV 588
K A N +
Sbjct: 700 QKGLVPEAVNTI 711
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 192/413 (46%), Gaps = 20/413 (4%)
Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNL----------FHDQGRIEEAKELVNQMSQMGCIP 337
+GY K + ++EV M + V + L + +G+++EA + +M C P
Sbjct: 50 LGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEP 109
Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
V +Y A+++ G DQA K+ +M G P+ S+T + C + A ++
Sbjct: 110 TVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLL 169
Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
N + N + Y V+ G E +E ++ +M+ G N L++ LC++
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK 229
Query: 458 GKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTY 517
G + +K + + + +G N+ + I+G CQ+G+L+ A+ ++ + PD +TY
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289
Query: 518 TTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
+I L KN + +EA + KM+++GL P TY T+I YC+ G V+ L E+++
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ----LAERIVG 345
Query: 578 KQKC------RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
+ Y +I+ LC G A + + L K + + L++ N+G
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 632 IPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
+ L A ++A M + LIP+++ + L G +AD L+ + +G+
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Score = 129 bits (324), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 194/462 (41%), Gaps = 59/462 (12%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
D Y ++ K + Q A+R++ G P+ F+Y L+ G+ A+
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF--VPDQFTYRSLIDGLCHEGETNRALA 377
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
+ + + PN+++ NT I L + +A + M G+ P V T+N L+ G C
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
+ + DA L+ M KG PD ++ ++ + +++ ++++ M+++
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
N + E+ E M + GC P++ T+ ++ CR +LD+A +L++M
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI-TYSVVMHGLRREGK 424
+ P+ V++ ++G C NG A + EE + ++ TY++++H +
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
++ A + +EMV + P L++ C+ G ++ KF+ E + G
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI-------- 669
Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
P T +I+ L RV EA ++ +M+ KG
Sbjct: 670 ---------------------------PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
Query: 545 LVPTVVTYRTVIHRYCQVGRVE-DLLKLLEKMLSKQKCRTAY 585
LVP V + C V + E KL+ + L K+ C T Y
Sbjct: 703 LVPEAV------NTICDVDKKEVAAPKLVLEDLLKKSCITYY 738
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 256/523 (48%), Gaps = 28/523 (5%)
Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
F+ L+ A ++ K + + MQ ++ +L + I+ ++L+ AL L +M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
G P+++T + L+ GYC RI DA+ L+D+M G PD ++ T++ L
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL------- 198
Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
H++ EA LV+QM Q GC PD+VTY VVNG C+ G++D A
Sbjct: 199 --------------FLHNKA--SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
+L++M + + V Y ++GLC +A + + + P+ TYS ++
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
L G+ S+A ++ +M+++ P V + LI + +EGK+ A+K E + + +
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
+ ++SLI GFC L+EA + + M P+ VTY+T+I K RVEE EL
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
+M +GLV VTY T+IH + Q ++ + ++M+S YN +++ LC G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
L +A + + R+ + D T ++++E G +++ C + + + P++
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH--LQRQRV 697
+ +G EEAD+L+ + E G + P S + L R R+
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARL 584
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/507 (26%), Positives = 244/507 (48%), Gaps = 15/507 (2%)
Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
HD Y + + + A VL M + G E S L+ Y + ++ +A+ +
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
+ M + P+ T IH L + NK ++A+ +++M G P+++TY ++ G C
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-------- 310
I A+ L+ +M D V Y T++ LCK K + + +L +M N
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 311 -SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
S+L + GR +A L++ M + P+VVT++A+++ F + G+L +A+K+ +M
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
P+ +Y++ +NG C + + EA+ M + PN +TYS ++ G + ++
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
E ++ REM ++G V LI + D A+ ++ ++ G N++ + L+
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
G C+ G L +A+ + + + +PD TY +I+ + K G+VE+ EL + KG+
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLEEAGKI 604
P V+ Y T+I +C+ G E+ LL+KM + YN +I G E + ++
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595
Query: 605 LGKVLRTASKADASTCHVLVESYLNKG 631
+ ++ DAST LV + L+ G
Sbjct: 596 IKEMRSCGFAGDASTIG-LVTNMLHDG 621
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 227/487 (46%), Gaps = 30/487 (6%)
Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
M GI +S + + R +L A+ VL+ M K P+++ ++ ++ +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
++ A+ +++M G P+ T+ LI G ++ +A+ L+D+M +GC PD V+Y T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE--------------------EAKEL 326
V+ LCK I L++KM ++G+IE +A L
Sbjct: 229 VVNGLCKRGDIDLALSLLKKM--------EKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280
Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
+M G PDV TY+++++ C G A ++L M PN V+++A ++
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 387 NGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVE 446
GK +EA ++ + + P+ TYS +++G +L EA + M+ K FP V
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 447 INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY 506
+ LI+ C+ +++ + +E +G N V +T+LI GF Q D + A + M
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 507 LCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
P+ +TY ++D L KNG++ +A + + + P + TY +I C+ G+VE
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 567 DLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLV 624
D +L + K AYN +I C G EEA +L K+ ++ T + L+
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 625 ESYLNKG 631
+ L G
Sbjct: 581 RARLRDG 587
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 223/443 (50%), Gaps = 32/443 (7%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
Y+ D + ++ L A ++ M +RG C+P+ +Y V + G +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG--CQPDLVTYGTVVNGLCKRGDIDL 241
Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
A+ +L M+K + +++I NT I L + AL M GI P+V TY+ LI
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DS 311
C+ R DA +L+ +M + +P+ V++ ++ KE ++ E L ++M+ D
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 312 NLF-----------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
++F HD R++EAK + M C P+VVTY+ ++ GFC+ +++ +
Sbjct: 362 DIFTYSSLINGFCMHD--RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 361 MLQQMYHHGCKPNTVSYTAFLNGL-----CHNGKSLEAREMINTSEEEWWTPNAITYSVV 415
+ ++M G NTV+YT ++G C N + + ++M++ PN +TY+++
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ-MVFKQMVSVGVH----PNILTYNIL 474
Query: 416 MHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM-DGAKKFMQECLNKG 474
+ GL + GKL++A V + + P N++I+ +C+ GK+ DG + F L KG
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL-KG 533
Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
+ NV+ + ++I GFC+KG EEA SLL M P++ TY T+I A ++G E +
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 535 ELMMKMLSKGLVPTVVTYRTVIH 557
EL+ +M S G T V +
Sbjct: 594 ELIKEMRSCGFAGDASTIGLVTN 616
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 170/354 (48%), Gaps = 4/354 (1%)
Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
G P S++ + G C E+ +++ N D ++++A +L M +
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILR--NRLSDIIKVDDAVDLFGDMVKSRP 79
Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
P +V + +++ ++ + + + +QM G + +Y+ F+N C + A
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
++ + + P+ +T S +++G ++S+A +V +MV+ G+ P LI L
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
K A + + + +GC ++V + +++ G C++GD++ ALSLL M K + D V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
Y TIID L K +++A L +M +KG+ P V TY ++I C GR D +LL M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 576 LSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
+ ++ ++ +I+ G L EA K+ ++++ + D T L+ +
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 175/377 (46%), Gaps = 27/377 (7%)
Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
AL F D + R D Y ++ L A R+L M R I FS L+
Sbjct: 277 ALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
A+ + GKL A + M K ++ P++ ++ I+ + ++L +A E M
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVM-GYLCKEKRIKEVRD 302
PNV+TY+ LIKG+C R+++ ++L EM +G + V+Y T++ G+ + RD
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF-------QARD 448
Query: 303 LMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
+ A+ + QM +G P+++TY +++G C+ G+L +A +
Sbjct: 449 -----------------CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
+ + +P+ +Y + G+C GK + E+ + +PN I Y+ ++ G R+
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
G EA ++++M + G P N LI++ R+G + + + ++E + G A +
Sbjct: 552 GSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 611
Query: 483 TSLIRGFCQKGDLEEAL 499
L+ G L+++
Sbjct: 612 -GLVTNMLHDGRLDKSF 627
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 247/506 (48%), Gaps = 25/506 (4%)
Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
F+ L+ A ++ K + + MQ+ ++ NL N I+ ++++ AL L +M
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
G P+++T + L+ GYC RI DA+ L+D+M G PD +++ T++ L
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL------- 200
Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
H++ EA LV++M Q GC P++VTY VVNG C+ G++D A
Sbjct: 201 --------------FLHNKA--SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
+L +M + N V Y+ ++ LC +A + E + PN ITYS ++
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
L + S+A ++ +M+++ P V N LI + +EGK+ A+K E + + +
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
+ ++SLI GFC L+EA + + M P+ VTY T+I+ K R++E EL
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
+M +GLV VTY T+IH + Q ++ + ++M+S YN +++ LC G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
LE+A + + R+ + T ++++E G + + C + + + PD+ +
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 657 KVSERLILEGKSEEADTLMLRFVERG 682
+ +G EEAD L + E G
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDG 570
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 236/487 (48%), Gaps = 25/487 (5%)
Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
M R GI ++ L+ + R ++ A+ +L M K P+++ ++ ++ G +
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
++ A+ +++M G P+ +T+ LI G ++ +A+ L+D M +GC P+ V+Y
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
V+ LCK +G I+ A L+N+M +VV Y+ V+
Sbjct: 231 VVNGLCK-----------------------RGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
+ C+ D A + +M + G +PN ++Y++ ++ LC+ + +A +++ E
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
PN +T++ ++ +EGKL EA + EM+K+ P + LI C ++D AK
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
+ ++K C NVV + +LI GFC+ ++E + L +M +TVTYTT+I +
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--A 584
+ A + +M+S G+ P ++TY T++ C+ G++E + + E + + T
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 585 YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMF 644
YN +IE +C G +E+ + + K D + ++ + KG+ A + +M
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 645 NRNLIPD 651
+PD
Sbjct: 568 EDGPLPD 574
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 220/449 (48%), Gaps = 12/449 (2%)
Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
H+ Y +++ + A +L M + G E S L+ Y ++ +A+ +
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
+ M + P+ + T IH L + NK ++A+ ++RM G PN++TY ++ G C
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-------- 310
I A L+++M + V Y TV+ LCK + + +L +M N
Sbjct: 238 RGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 297
Query: 311 -SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
S+L + R +A L++ M + P+VVT+ A+++ F + G+L +A+K+ +M
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
P+ +Y++ +NG C + + EA+ M + PN +TY+ +++G + ++
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
E ++ REM ++G V LI + D A+ ++ ++ G N++ + +L+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
G C+ G LE+A+ + + + K +P TY +I+ + K G+VE+ +L + KG+
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
P V+ Y T+I +C+ G E+ L KM
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 27/413 (6%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
YR D I + ++ L A ++ M +RG C+P +Y +V + G +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDIDL 243
Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
A +L+ M+ A + N++I +T I L AL M+ G+ PNV+TY+ LI
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
C+ R DA +L+ +M + +P+ V++ ++ KE
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE-------------------- 343
Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
G++ EA++L ++M + PD+ TY++++NGFC LD+AK M + M C PN
Sbjct: 344 ---GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
V+Y +NG C + E E+ + N +TY+ ++HG + A V ++
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
MV G P + N L+ LC+ GK++ A + + + +I G C+ G
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
+E+ L + L PD + Y T+I + G EEA L KM G +P
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/194 (18%), Positives = 79/194 (40%), Gaps = 7/194 (3%)
Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
++ ++R L++A+ L M + P + ++ A++K + + L KM
Sbjct: 52 DYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM 111
Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYL 598
G+ + TY +I+ +C+ ++ L LL KM L + + ++ C +
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
+A ++ +++ + D T L+ A + RM R P+L V
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL-----V 226
Query: 659 SERLILEGKSEEAD 672
+ +++ G + D
Sbjct: 227 TYGVVVNGLCKRGD 240
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 241/472 (51%), Gaps = 30/472 (6%)
Query: 106 LKPRQICAVLRSQADERVALQFFYWADRQWR-YRHDPIVYYMMLEILSKTKLCQGAKRVL 164
L P+++ +++ Q + +ALQ F +A + + H+ Y+ +L LS+ + + ++
Sbjct: 47 LFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLM 106
Query: 165 RLM--ARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV 222
+ + I+C F L+ Y AG+ ++M + + V ++ NT ++VL+
Sbjct: 107 ADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLI 166
Query: 223 VGNK--LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
+ L A+ F + GITPN+ T N L+K C + I+ A K++DE+P G P+
Sbjct: 167 QNQRFDLVHAM-FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPN 225
Query: 281 KVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVV 340
V+Y T++G + +G +E AK ++ +M G PD
Sbjct: 226 LVTYTTILGG-----------------------YVARGDMESAKRVLEEMLDRGWYPDAT 262
Query: 341 TYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
TYT +++G+C++G +A ++ M + +PN V+Y + LC KS EAR M +
Sbjct: 263 TYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322
Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
E + P++ V+ L + K+ EAC + R+M+K P ++ LI LC+EG++
Sbjct: 323 LERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRV 382
Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
A+K E KG +++ + +LI G C+KG+L EA L DDMY K P+ TY +
Sbjct: 383 TEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVL 441
Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
I+ LSKNG V+E ++ +ML G P T+ + ++G+ ED +K++
Sbjct: 442 IEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 155/313 (49%), Gaps = 15/313 (4%)
Query: 176 PEAFS--YLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
P F+ L+ A + + +A VL + + PNL+ T + V + A R
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRV 248
Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
LE M G P+ TY L+ GYC L R +A ++D+M P++V+Y ++ LCK
Sbjct: 249 LEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 308
Query: 294 EKRIKEVRDLMEKMVN-----DSNL-------FHDQGRIEEAKELVNQMSQMGCIPDVVT 341
EK+ E R++ ++M+ DS+L + +++EA L +M + C+PD
Sbjct: 309 EKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNAL 368
Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
+ +++ C+ G + +A+K+ + + G P+ ++Y + G+C G+ EA + +
Sbjct: 369 LSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMY 427
Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
E PNA TY+V++ GL + G + E V+ EM++ G FP +L + L + GK +
Sbjct: 428 ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEE 487
Query: 462 GAKKFMQECLNKG 474
A K + + G
Sbjct: 488 DAMKIVSMAVMNG 500
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 175/424 (41%), Gaps = 16/424 (3%)
Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVND-------SNLFHD-------QGRIEEAKELVN 328
+Y++++ L + + V LM + N NLF D GR E + +
Sbjct: 85 TYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFL 144
Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH-GCKPNTVSYTAFLNGLCHN 387
++ G V + ++N + D M + G PN + + LC
Sbjct: 145 RIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKK 204
Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
A ++++ PN +TY+ ++ G G + A V+ EM+ +G++P
Sbjct: 205 NDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTY 264
Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
+L+ C+ G+ A M + N V + +IR C++ EA ++ D+M
Sbjct: 265 TVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLE 324
Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
PD+ +IDAL ++ +V+EA L KML +P T+IH C+ GRV +
Sbjct: 325 RSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTE 384
Query: 568 LLKLLEKMLSKQ-KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
KL ++ YN +I +C G L EAG++ + K +A T +VL+E
Sbjct: 385 ARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG 444
Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
G +V M P+ + E L GK E+A ++ V G +
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDK 504
Query: 687 KSEE 690
+S E
Sbjct: 505 ESWE 508
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 120/282 (42%), Gaps = 24/282 (8%)
Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
+ AKRVL M RG ++ LM Y + G+ A V+ M+K + PN +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
I L K +A + M P+ +I C+ H++ +A L +M C
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
PD T++ +LCKE R+ E R L ++ + G IP
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDEF------------------------EKGSIP 398
Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
++TY ++ G C GEL +A ++ MY CKPN +Y + GL NG E ++
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 458
Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
E PN T+ ++ GL++ GK +A +V V G
Sbjct: 459 EEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 219 bits (558), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 241/494 (48%), Gaps = 28/494 (5%)
Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
I Y ++ L K + A+ + + + G + L++ + R LR+A+ V +
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDV 255
Query: 202 MQK-AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
M K APN + + IH L +L +A ++M G P+ TY LIK CD
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
I A L DEM +GC P+ +Y ++ LC++ +I+E + KMV D RI
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD--------RI 367
Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
P V+TY A++NG+C+ G + A ++L M CKPN ++
Sbjct: 368 ---------------FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
+ GLC GK +A ++ + +P+ ++Y+V++ GL REG ++ A ++ M
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
P + +I + C++GK D A F+ L KG +++ V T+LI G C+ G +AL
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
+L+ + + + I+D LSK +V+E ++ K+ GLVP+VVTY T++
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 561 QVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKADA 617
+ G + ++LE ++ C Y +I LC FG +EEA K+L + + +
Sbjct: 593 RSGDITGSFRILE-LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 618 STCHVLVESYLNKG 631
T V+V+ Y+N G
Sbjct: 652 VTYTVMVKGYVNNG 665
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 152/629 (24%), Positives = 285/629 (45%), Gaps = 50/629 (7%)
Query: 99 LRNLLRSLKPRQICAVLRSQ-ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
L++L+ + P V+ Q +D + ++FF W + Y DP +L+++ + L
Sbjct: 60 LKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLY 119
Query: 158 QGAKRVLRLMARRGIECRPE----------------------AFSYLMVAYSRAGKLRNA 195
+ A V+ + + C E +S L+++ ++ A
Sbjct: 120 RVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLA 179
Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
M+ ++ T ++ L A F+ ++ G + L+ G
Sbjct: 180 YVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLG 239
Query: 256 YCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
+C ++DA+K+ D M + C+P+ VSY ++ LC
Sbjct: 240 FCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLC---------------------- 277
Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
+ GR+EEA L +QM + GC P TYT ++ C G +D+A + +M GCKPN
Sbjct: 278 -EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNV 336
Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
+YT ++GLC +GK EA + ++ P+ ITY+ +++G ++G++ A +++
Sbjct: 337 HTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTV 396
Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
M K+ P N L++ LCR GK A ++ L+ G + ++V++ LI G C++G
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
+ A LL M +PD +T+T II+A K G+ + A+ + ML KG+ VT T
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRTA 612
+I C+VG+ D L +LE ++ + T + N +++ L ++E +LGK+ +
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
T LV+ + G ++++ M +P++ + L G+ EEA+
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 673 TLMLRFVERGHIQPKSEEHLQRQRVFLNS 701
L+ + G + P + + ++N+
Sbjct: 637 KLLSAMQDSG-VSPNHVTYTVMVKGYVNN 664
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 227/490 (46%), Gaps = 71/490 (14%)
Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
A +L +M +R + F+ LM R GK A+++L M ++P+++ N I
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
L + A + L M I P+ LT+ +I +C + A + M KG S
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMV--------NDSNLFHDQ----GRIEEAKELV 327
D+V+ T++ +CK + ++ ++E +V + N+ D +++E ++
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML 569
Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
+++++G +P VVTYT +V+G R G++ + ++L+ M GC PN YT +NGLC
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQF 629
Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
G+ EA ++++ ++ +PN +TY+V++ G GKL A + VR MV++G+
Sbjct: 630 GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIY 689
Query: 448 NLLIQSLCREGK-MDGAKKFM----------QECLNK---------GCAVNVVNFTSLIR 487
+ L+Q K +D +++ EC+N+ GC + F L+
Sbjct: 690 SSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF--LVT 747
Query: 488 GFCQKGD-----------------LEEALSLLDDMYLCKKD-----------------PD 513
C++G LE+A+ ++ + Y KK P
Sbjct: 748 RLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPS 807
Query: 514 TVTYTTIIDALSKNGRVEEATELMMKML-SKGLV--PTVVTYRTVIHRYCQVGRVEDLLK 570
++ +I L K G E A EL+M++L S G+V V+TY + + G +++
Sbjct: 808 FKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVID 867
Query: 571 LLEKMLSKQK 580
L++++ +++
Sbjct: 868 LVDQLHCRER 877
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 154/330 (46%), Gaps = 37/330 (11%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
D + +++ + K + A +L + + I P + + ++ S+ K++ + +L
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML 569
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
+ K + P+++ T + L+ + + R LE M+L+G PNV Y +I G C
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQF 629
Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVM--GYLCK---EKRIKEVRDLMEKM--VND-- 310
R+++A KL+ M G SP+ V+ YTVM GY+ ++ ++ VR ++E+ +ND
Sbjct: 630 GRVEEAEKLLSAMQDSGVSPNHVT-YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRI 688
Query: 311 -SNLFH----DQGRIEEAK------------------ELVNQMSQM-GCIPDVVTYTAVV 346
S+L Q I+ ++ EL++ + Q+ GCI + + +V
Sbjct: 689 YSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF--LV 746
Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
C+ G D++ ++Q + G + + C K + E+I + +
Sbjct: 747 TRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFV 805
Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMV 436
P+ ++ +V+ GL++EG A ++V E++
Sbjct: 806 PSFKSFCLVIQGLKKEGDAERARELVMELL 835
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 254/507 (50%), Gaps = 25/507 (4%)
Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
FS L A ++ + + + M+ +A NL + I+ KL A + ++
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
G PN +T++ LI G C R+ +A++L+D M G PD ++ T++ LC
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL----- 205
Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
G+ EA L+++M + GC P+ VTY V+N C+ G+ A
Sbjct: 206 ------------------SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
++L++M K + V Y+ ++GLC +G A + N E + T N ITY++++ G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
G+ + ++R+M+K+ P V ++LI S +EGK+ A++ +E +++G A +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
+ +TSLI GFC++ L++A ++D M DP+ T+ +I+ K R+++ EL
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFG 596
KM +G+V VTY T+I +C++G++ +L ++M+S++ Y +++ LC G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
E+A +I K+ ++ + D ++++ N A+ + C + + + P +K
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 657 KVSERLILEGKSEEADTLMLRFVERGH 683
+ L +G EA+ L + E GH
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGH 574
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 235/505 (46%), Gaps = 16/505 (3%)
Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
I + + ++KTK + + M +GI S ++ + R KL A +
Sbjct: 89 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 148
Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
+ K PN + +T I+ L + ++++AL ++RM G P+++T N L+ G C +
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD----- 316
+A+ LID+M GC P+ V+Y V+ +CK + +L+ KM + N+ D
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYS 267
Query: 317 --------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
G ++ A L N+M G +++TY ++ GFC G D K+L+ M
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
PN V+++ ++ GK EA E+ P+ ITY+ ++ G +E L +A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
+V MV KG P N+LI C+ ++D + ++ +G + V + +LI+G
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
FC+ G L A L +M K P+ VTY ++D L NG E+A E+ K+ +
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILG 606
+ Y +IH C +V+D L + K + YN +I LC G L EA +
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 607 KVLRTASKADASTCHVLVESYLNKG 631
K+ D T ++L+ ++L G
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDG 592
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 210/425 (49%), Gaps = 18/425 (4%)
Query: 132 DRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRA 189
D+ Y P + Y +L ++ K+ A +LR M R I+ +S ++ +
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 190 GKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTY 249
G L NA + + M+ + N++ N I + + L M I PNV+T+
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 250 NCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN 309
+ LI + ++++A +L EM +G +PD ++Y +++ CKE + + +++ MV+
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 310 ---DSNL---------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
D N+ + RI++ EL +MS G + D VTY ++ GFC +G+L+
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
AK++ Q+M PN V+Y L+GLC NG+S +A E+ E+ + Y++++H
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
G+ K+ +A D+ + KG P N++I LC++G + A+ ++ G A
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
+ + LIR GD +++ L++++ C D T +ID LS +GR++++
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS-DGRLKKS---F 632
Query: 538 MKMLS 542
+ MLS
Sbjct: 633 LDMLS 637
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 182/393 (46%), Gaps = 23/393 (5%)
Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
+ ++A +L M +P V+ ++ + + + + D + +QM G N + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
+N C K A + + + PN IT+S +++GL EG++SEA ++V MV+
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
G P + IN L+ LC GK A + + + GC N V + ++ C+ G A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
+ LL M D V Y+ IID L K+G ++ A L +M KG+ ++TY +I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 559 YCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
+C GR +D KLL M+ ++ ++ +I++ G L EA ++ +++ D
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 617 ASTCHVLV-----ESYLNKGIPLLAYKVA------CRMFN--------RNLIPD-LKLCK 656
T L+ E++L+K ++ V+ R FN N I D L+L +
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKSE 689
K+S R ++ + +TL+ F E G + E
Sbjct: 428 KMSLRGVV-ADTVTYNTLIQGFCELGKLNVAKE 459
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 156/600 (26%), Positives = 272/600 (45%), Gaps = 69/600 (11%)
Query: 144 YYMMLEILSKTKLCQGAKRVLRLMAR-RGIECRPEAFSYLMV--AYSRAGKLRNAMYVLS 200
Y ++L+ L Q A +L +MA RG P+ SY V + + G A
Sbjct: 161 YNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYH 220
Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
M + P+++ N+ I L + KA+ L M G+ P+ +TYN ++ GYC
Sbjct: 221 EMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 280
Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
+ K+AI + +M G PD V+Y +M YLCK GR
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK-----------------------NGRC 317
Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
EA+++ + M++ G P++ TY ++ G+ G L + +L M +G P+ ++
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377
Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
+ GK +A + + ++ PNA+TY V+ L + G++ +A +M+ +G
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
P + N LI LC K + A++ + E L++G +N + F S+I C++G + E+
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
L + M P+ +TY T+I+ G+++EA +L+ M+S GL P VTY T+I+ YC
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 561 QVGRVEDLLKLLEKMLSK-----------------QKCRTA------------------- 584
++ R+ED L L ++M S Q RTA
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617
Query: 585 -YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
YN ++ LC ++A ++ + K +A T ++++++ L G A +
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677
Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF------VERGHIQPKSEEHLQRQRV 697
+ L+P+ + ++E +I +G EE D L L V+ G + E LQR +
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 234/482 (48%), Gaps = 22/482 (4%)
Query: 228 AKALRFLERMQLAG---ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
A A+ RM AG +TP++ TY LI C R+ + + KG D +++
Sbjct: 66 AAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAF 125
Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVND----SNLFH---------DQGRIEEAKELVNQMS 331
++ LC +KR + D++ + + + N+F D+ R +EA EL++ M+
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMA 185
Query: 332 Q---MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
G PDVV+YT V+NGF + G+ D+A +M G P+ V+Y + + LC
Sbjct: 186 DDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQ 245
Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
+A E++NT + P+ +TY+ ++HG G+ EA +++M G P V +
Sbjct: 246 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYS 305
Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
LL+ LC+ G+ A+K +G + + +L++G+ KG L E LLD M
Sbjct: 306 LLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 365
Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
PD ++ +I A +K G+V++A + KM +GL P VTY VI C+ GRVED
Sbjct: 366 GIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 425
Query: 569 LKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
+ E+M+ + YN +I LC+ E A +++ ++L + + +++S
Sbjct: 426 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 485
Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
+ +G + + K+ M + P++ + L GK +EA L+ V G ++P
Sbjct: 486 HCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG-LKP 544
Query: 687 KS 688
+
Sbjct: 545 NT 546
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 225/489 (46%), Gaps = 27/489 (5%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
D + Y ++++ L K C A+++ M +RG++ + L+ Y+ G L +L
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
+M + + P+ + + I K+ +A+ +M+ G+ PN +TY +I C
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419
Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
R++DA+ ++M +G SP + Y +++ LC +
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW---------------------- 457
Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
E A+EL+ +M G + + + ++++ C+ G + +++K+ + M G KPN ++Y
Sbjct: 458 -ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516
Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
+NG C GK EA ++++ PN +TYS +++G + ++ +A + +EM G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
P + N+++Q L + + AK+ G + + + ++ G C+ ++AL
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
+ ++ L + T+ +IDAL K GR +EA +L + S GLVP TYR +
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 696
Query: 560 CQVGRVEDLLKLLEKMLSKQKCRT---AYNQVIENLCSFGYLEEAGKILGKVLRTASKAD 616
G +E+L +L M C N ++ L G + AG L + +
Sbjct: 697 IGQGLLEELDQLFLSM-EDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 755
Query: 617 ASTCHVLVE 625
AST + ++
Sbjct: 756 ASTASLFID 764
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 177/443 (39%), Gaps = 100/443 (22%)
Query: 163 VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNL----------- 211
+L LM R GI FS L+ AY++ GK+ AM V S M++ + PN
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417
Query: 212 ------------------------LICNTAIHVLVVGNKLAKA----LRFLER------- 236
++ N+ IH L NK +A L L+R
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477
Query: 237 ------------------------MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
M G+ PNV+TYN LI GYC ++ +A+KL+ M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537
Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQ 332
G P+ V+Y T++ CK R+E+A L +M
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKIS-----------------------RMEDALVLFKEMES 574
Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
G PD++TY ++ G + AK++ ++ G + +Y L+GLC N + +
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
A +M A T+++++ L + G+ EA D+ G P L+ +
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694
Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA---LSLLDDMYLCK 509
++ +G ++ + + GC V+ ++R Q+G++ A LS++D+ +
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF-- 752
Query: 510 KDPDTVTYTTIIDALSKNGRVEE 532
+ T + ID LS G+ +E
Sbjct: 753 -SLEASTASLFIDLLS-GGKYQE 773
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 211/445 (47%), Gaps = 29/445 (6%)
Query: 170 RGIECRPEA----FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
R + RP F+ L+ ++ + + + MQ + P L CN +H + + +
Sbjct: 73 RMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSS 132
Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
+ +A FL +M G P+++T+ L+ GYC +RI+DAI L D++ G P+ V+Y
Sbjct: 133 QPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYT 192
Query: 286 TVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
T++ LCK + + A EL NQM G P+VVTY A+
Sbjct: 193 TLIRCLCKNRHL-----------------------NHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
V G C +G A +L+ M +PN +++TA ++ GK +EA+E+ N +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
P+ TY +++GL G L EA + M + G +P V LI C+ +++ K
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
E KG N + +T LI+G+C G + A + + M + PD TY ++D L
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409
Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
NG+VE+A + M + + +VTY +I C++G+VED L + SK +
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469
Query: 584 AYNQVIENLCSFGYLEEAGKILGKV 608
Y +I C G + EA + K+
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKM 494
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 183/387 (47%), Gaps = 23/387 (5%)
Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
M + G E F+ L+ Y ++ +A+ + + PN++ T I L
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
L A+ +M G PNV+TYN L+ G C++ R DA L+ +M + P+ +++
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
++ + F G++ EAKEL N M QM PDV TY +++
Sbjct: 264 LI-----------------------DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
NG C G LD+A++M M +GC PN V YT ++G C + + + ++ ++
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
N ITY+V++ G G+ A +V +M + P N+L+ LC GK++ A
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
+ + +N+V +T +I+G C+ G +E+A L ++ P+ +TYTT+I +
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYR 553
G + EA L KM G +P Y+
Sbjct: 481 RGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 212/467 (45%), Gaps = 35/467 (7%)
Query: 178 AFSYLMVAYSRAGK-LRNAMY---------VLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
F + + A+S K LRN ++ + + M + P+++ + V+ N+
Sbjct: 40 GFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRY 99
Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
+ E+MQ+ GI P + T N ++ C + A + +M G PD V++ ++
Sbjct: 100 DVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSL 159
Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
+ C RIE+A L +Q+ MG P+VVTYT ++
Sbjct: 160 LNGYCH-----------------------WNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
C+ L+ A ++ QM +G +PN V+Y A + GLC G+ +A ++ + P
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
N IT++ ++ + GKL EA ++ M++ +P LI LC G +D A++
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
GC N V +T+LI GFC+ +E+ + + +M +T+TYT +I
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK--CRTAY 585
GR + A E+ +M S+ P + TY ++ C G+VE L + E M ++ Y
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
+I+ +C G +E+A + + K + T ++ + +G+
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 215/465 (46%), Gaps = 33/465 (7%)
Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
AL RM + P+++ + L+ ++R I L ++M + G P + VM
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
+C + A + +M ++G PD+VT+T+++NG+
Sbjct: 127 CVCLSSQPCR-----------------------ASCFLGKMMKLGFEPDLVTFTSLLNGY 163
Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
C ++ A + Q+ G KPN V+YT + LC N A E+ N PN
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
+TY+ ++ GL G+ +A ++R+M+K+ P + LI + + GK+ AK+
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD---PDTVTYTTIIDALSK 526
+ +V + SLI G C G L+EA + YL +++ P+ V YTT+I K
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF---YLMERNGCYPNEVIYTTLIHGFCK 340
Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQK---CRT 583
+ RVE+ ++ +M KG+V +TY +I YC VGR + ++ +M S++ RT
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRT 400
Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
YN +++ LC G +E+A I + + + T ++++ G A+ + C +
Sbjct: 401 -YNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459
Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
F++ + P++ + G EAD+L + E G + +S
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNES 504
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 149/335 (44%), Gaps = 27/335 (8%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
++ + + Y ++ L K + A + M G RP +Y L+ G+ +
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG--SRPNVVTYNALVTGLCEIGRWGD 241
Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
A ++L M K + PN++ I V KL +A M + P+V TY LI
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
G C + +A ++ M GC P++V Y T++ CK K
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK------------------- 342
Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
R+E+ ++ +MSQ G + + +TYT ++ G+C VG D A+++ QM P+
Sbjct: 343 ----RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
+Y L+GLC NGK +A + + N +TY++++ G+ + GK+ +A D+
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCS 458
Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
+ KG P + +I CR G + A ++
Sbjct: 459 LFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 171/356 (48%), Gaps = 4/356 (1%)
Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
+ +A +L +M +P ++ +T +++ ++ D + +QM G P +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKK 438
++ +C + + A + + + P+ +T++ +++G ++ +A + +++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 439 GFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEA 498
GF P V LI+ LC+ ++ A + + G NVV + +L+ G C+ G +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 499 LSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHR 558
LL DM + +P+ +T+T +IDA K G++ EA EL M+ + P V TY ++I+
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 559 YCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
C G +++ ++ ++ + C Y +I C +E+ KI ++ + A
Sbjct: 303 LCMYGLLDEARQMF-YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 616 DASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
+ T VL++ Y G P +A +V +M +R PD++ + + L GK E+A
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 126/293 (43%), Gaps = 35/293 (11%)
Query: 130 WADRQW--------RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
W D W R + I + +++ K AK + +M + + P+ F+Y
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY--PDVFTY 296
Query: 182 --LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQL 239
L+ G L A + +M++ PN +I T IH ++ ++ M
Sbjct: 297 GSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQ 356
Query: 240 AGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKE 299
G+ N +TY LI+GYC + R A ++ ++M + PD +Y ++ LC
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC------ 410
Query: 300 VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAK 359
G++E+A + M + ++VTYT ++ G C++G+++ A
Sbjct: 411 -----------------NGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453
Query: 360 KMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY 412
+ ++ G KPN ++YT ++G C G EA + +E+ + PN Y
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 1/190 (0%)
Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
A Q FY +R Y ++ ++Y ++ K+K + ++ M+++G+ ++ L+
Sbjct: 312 ARQMFYLMERNGCYPNE-VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370
Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
Y G+ A V + M P++ N + L K+ KAL E M+ +
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430
Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
N++TY +I+G C L +++DA L + KG P+ ++Y T++ C+ I E L
Sbjct: 431 INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSL 490
Query: 304 MEKMVNDSNL 313
+KM D L
Sbjct: 491 FKKMKEDGFL 500
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/506 (28%), Positives = 242/506 (47%), Gaps = 25/506 (4%)
Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
FS L+ A ++ K + M+ V+ NL N I+ L ++L+ AL L +M
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127
Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
G P+++T N L+ G+C +RI +A+ L+D+M G PD V++ T++ L + +
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
E L+E+MV GC PD+VTY AV+NG C+ GE D A
Sbjct: 188 EAVALVERMV-----------------------VKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
+L +M + + V Y+ ++ LC +A + + + P+ TYS ++
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
L G+ S+A ++ +M+++ P V N LI + +EGK+ A+K E + + N
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
+V + SLI GFC L+EA + M PD VTY T+I+ K +V + EL
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFG 596
M +GLV VTY T+IH + Q ++ + ++M+S YN +++ LC G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
LE+A + + ++ + D T +++ E G + + C + + + PD+
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 657 KVSERLILEGKSEEADTLMLRFVERG 682
+ +G EEA TL ++ E G
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDG 550
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 238/484 (49%), Gaps = 27/484 (5%)
Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
G+ ++ ++ R +L A+ +L M K P+++ N+ ++ GN++++A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
+ +++M G P+ +T+ L+ G ++ +A+ L++ M +KGC PD V+Y V+
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
LCK +L+ KM ++G+IE DVV Y+ V++ C
Sbjct: 215 LCKRGEPDLALNLLNKM--------EKGKIE---------------ADVVIYSTVIDSLC 251
Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
+ +D A + +M + G +P+ +Y++ ++ LC+ G+ +A +++ E PN +
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
T++ ++ +EGKL EA + EM+++ P V N LI C ++D A++
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
++K C +VV + +LI GFC+ + + + L DM +TVTYTT+I +
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT---AYNQ 587
+ A + +M+S G+ P ++TY T++ C+ G++E + + E L K K YN
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE-YLQKSKMEPDIYTYNI 490
Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
+ E +C G +E+ + + K D + ++ + KG+ AY + +M
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 648 LIPD 651
+PD
Sbjct: 551 PLPD 554
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 125/507 (24%), Positives = 243/507 (47%), Gaps = 15/507 (2%)
Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
H+ Y +M+ L + A +L M + G + L+ + ++ A+ +
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
+ M + P+ + T +H L NK ++A+ +ERM + G P+++TY +I G C
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND-------- 310
A+ L+++M D V Y TV+ LCK + + + +L +M N
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 311 -SNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
S+L + GR +A L++ M + P+VVT+ ++++ F + G+L +A+K+ +M
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
PN V+Y + +NG C + + EA+++ + P+ +TY+ +++G + K+
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
+ ++ R+M ++G V LI + D A+ ++ ++ G N++ + +L+
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
G C+ G LE+A+ + + + K +PD TY + + + K G+VE+ +L + KG+
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKI 604
P V+ Y T+I +C+ G E+ L KM YN +I G + ++
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 605 LGKVLRTASKADASTCHVLVESYLNKG 631
+ ++ DAST + LV L+ G
Sbjct: 578 IKEMRSCRFAGDAST-YGLVTDMLHDG 603
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 208/450 (46%), Gaps = 30/450 (6%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
Y+ D + + ++ L + A ++ M +G C+P+ +Y V + G+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG--CQPDLVTYGAVINGLCKRGEPDL 223
Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
A+ +L+ M+K + +++I +T I L + AL M GI P+V TY+ LI
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
C+ R DA +L+ +M + +P+ V++ +++ KE
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE-------------------- 323
Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
G++ EA++L ++M Q P++VTY +++NGFC LD+A+++ M C P+
Sbjct: 324 ---GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
V+Y +NG C K ++ E+ N +TY+ ++HG + A V ++
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
MV G P + N L+ LC+ GK++ A + ++ + + G C+ G
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
+E+ L + L PD + Y T+I K G EEA L +KM G +P TY T
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Query: 555 VIHRYCQVGRVEDLLKLLEKMLSKQKCRTA 584
+I + + G +L+++M S CR A
Sbjct: 561 LIRAHLRDGDKAASAELIKEMRS---CRFA 587
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 166/357 (46%), Gaps = 16/357 (4%)
Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
AL F D + R D Y ++ L A R+L M R I F+ L+
Sbjct: 259 ALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317
Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
A+++ GKL A + M + ++ PN++ N+ I+ + ++L +A + M
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
P+V+TYN LI G+C ++ D ++L +M +G + V+Y T++ + + +
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 304 MEKMVNDS--------NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
++MV+D N D G++E+A + + + PD+ TY + G C+
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
G+++ + + G KP+ ++Y ++G C G EA + +E+ P++ T
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
Y+ ++ R+G + + ++++EM + F L+ + +G++D K F++
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEM-RSCRFAGDASTYGLVTDMLHDGRLD--KGFLE 611
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/521 (27%), Positives = 265/521 (50%), Gaps = 16/521 (3%)
Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
+ S L+ Y + K A VL++M K A N+ N + L + KA+ L M
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
+ + P+V +YN +I+G+C+ ++ A++L +EM GCS V++ ++ CK ++
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 298 KEVRDLMEKM---------VNDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
E +++M V ++L F D G ++ K L +++ + G P +TY +
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
+ GFC++G+L +A ++ + M G +PN +YT ++GLC GK+ EA +++N E+
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
PNA+TY+++++ L ++G +++A ++V M K+ P + N+L+ LC +G +D A K
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 466 FMQECLNKGCAV--NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
+ L +V+++ +LI G C++ L +AL + D + D VT ++++
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468
Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKC 581
K G V +A EL ++ +V TY +I +C+ G + LL KM Q
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS 528
Query: 582 RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
YN ++ +LC G L++A ++ ++ R + D + +++++ L G A +
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588
Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
M L PDL K+ R + G +EA + + V+ G
Sbjct: 589 GMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 141/557 (25%), Positives = 258/557 (46%), Gaps = 36/557 (6%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
Y H+ ++L+ L + C A +LR M R + P+ FSY V + +L
Sbjct: 143 YNHN-----ILLKGLCRNLECGKAVSLLREMRRNSL--MPDVFSYNTVIRGFCEGKELEK 195
Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
A+ + + M+ + + +L+ I K+ +A+ FL+ M+ G+ +++ Y LI+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
G+CD + L DE+ +G SP ++Y T++ CK
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK--------------------- 294
Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
G+++EA E+ M + G P+V TYT +++G C VG+ +A ++L M +PN
Sbjct: 295 --LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
V+Y +N LC +G +A E++ ++ P+ ITY++++ GL +G L EA ++
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 435 MVKKGFFPTP--VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
M+K + P + N LI LC+E ++ A + K A + V L+ +
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 493 GDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY 552
GD+ +A+ L + K ++ TYT +ID K G + A L+ KM L P+V Y
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 553 RTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLR 610
++ C+ G ++ +L E+M ++N +I+ G ++ A +L + R
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 611 TASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEE 670
D T L+ +L G A +M + PD +C V + I +G++++
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDK 652
Query: 671 ADTLMLRFVERGHIQPK 687
L+ + V++ + K
Sbjct: 653 LTELVKKLVDKDIVLDK 669
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 189/413 (45%), Gaps = 16/413 (3%)
Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
P A +Y L+ + + G+L+ A + M + V PN+ I L K +AL+
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
L M PN +TYN +I C + DA+++++ M + PD ++Y ++G LC
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 294 EKRIKEVRDLMEKMVNDSN-----------LFHD---QGRIEEAKELVNQMSQMGCIPDV 339
+ + E L+ M+ DS+ L H + R+ +A ++ + + + D
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459
Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
VT ++N + G++++A ++ +Q+ N+ +YTA ++G C G A+ ++
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
P+ Y+ ++ L +EG L +A + EM + FP V N++I + G
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
+ A+ + G + ++ ++ LI F + G L+EA+S D M +PD +
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
++ G ++ TEL+ K++ K +V TV+ C DL K L
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRL 692
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 165/332 (49%), Gaps = 9/332 (2%)
Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
+LM K+V N H E A +M + + V+ + ++ + ++ + A +
Sbjct: 77 NLMAKLVRSRN--H-----ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGV 129
Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
L M G N ++ L GLC N + +A ++ P+ +Y+ V+ G
Sbjct: 130 LALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE 189
Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
+L +A ++ EM G + V +LI + C+ GKMD A F++E G ++V
Sbjct: 190 GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249
Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
+TSLIRGFC G+L+ +L D++ P +TY T+I K G+++EA+E+ M+
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYLE 599
+G+ P V TY +I C VG+ ++ L+LL M+ K + A YN +I LC G +
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKG 631
+A +I+ + + ++ D T ++L+ KG
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 117/257 (45%), Gaps = 16/257 (6%)
Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAG 190
++ R R D I Y ++L L A ++L LM + P+ SY L+ +
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
+L A+ + ++ + A + + N ++ + + KA+ +++ + I N TY
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYT 498
Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
+I G+C + A L+ +M + P Y ++ LCKE + + L E+M D
Sbjct: 499 AMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRD 558
Query: 311 SNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
+N F D G I+ A+ L+ MS+ G PD+ TY+ ++N F ++G LD+
Sbjct: 559 NN-FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617
Query: 358 AKKMLQQMYHHGCKPNT 374
A +M G +P+
Sbjct: 618 AISFFDKMVDSGFEPDA 634
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/587 (25%), Positives = 263/587 (44%), Gaps = 47/587 (8%)
Query: 122 RVALQFFYWADRQWRYRHDPIVYYMML--EILSKTKLCQGAKRVLR-------------- 165
++AL+F W +Q D IV + + IL + ++ A+ +L+
Sbjct: 51 KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFG 110
Query: 166 --LMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVV 223
+ R P + L+ Y R G +++++ + +M P++ CN + +V
Sbjct: 111 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 170
Query: 224 GNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
+ FL+ M I P+V T+N LI C + + L+ +M G +P V+
Sbjct: 171 SGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT 230
Query: 284 YYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYT 343
Y TV+ + CK +GR + A EL++ M G DV TY
Sbjct: 231 YNTVLHWYCK-----------------------KGRFKAAIELLDHMKSKGVDADVCTYN 267
Query: 344 AVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
+++ CR + + +L+ M PN V+Y +NG + GK L A +++N
Sbjct: 268 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 327
Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
+PN +T++ ++ G EG EA + M KG P+ V +L+ LC+ + D A
Sbjct: 328 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 387
Query: 464 KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDA 523
+ F G V + +T +I G C+ G L+EA+ LL++M DPD VTY+ +I+
Sbjct: 388 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 447
Query: 524 LSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT 583
K GR + A E++ ++ GL P + Y T+I+ C++G +++ +++ E M+ + R
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 584 --AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVAC 641
+N ++ +LC G + EA + + + + + L+ Y N G L A+ V
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 642 RMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPKS 688
M P + + L G EA+ +F++ H P +
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAE----KFLKSLHAVPAA 610
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 209/441 (47%), Gaps = 12/441 (2%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
Y + Y +L K + A +L M +G++ ++ L+ R+ ++
Sbjct: 224 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY 283
Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
+L M+K + PN + NT I+ K+ A + L M G++PN +T+N LI G+
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343
Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
K+A+K+ M KG +P +VSY ++ LCK R +M +
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403
Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
+ G ++EA L+N+MS+ G PD+VTY+A++NGFC+VG AK+++ +
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463
Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
+Y G PN + Y+ + C G EA + E T + T++V++ L + GK
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523
Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
++EA + +R M G P V + LI G+ A E G + S
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583
Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
L++G C+ G L EA L ++ DTV Y T++ A+ K+G + +A L +M+ +
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 545 LVPTVVTYRTVIHRYCQVGRV 565
++P TY ++I C+ G+
Sbjct: 644 ILPDSYTYTSLISGLCRKGKT 664
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/616 (21%), Positives = 255/616 (41%), Gaps = 90/616 (14%)
Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
I Y M++ L K A +L M++ GI+ +S L+ + + G+ + A ++
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463
Query: 202 MQKAAVAPNLLICNTAIH-------------------------------VLVV----GNK 226
+ + ++PN +I +T I+ VLV K
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523
Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
+A+A F+ M GI PN ++++CLI GY + A + DEM G P +Y +
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583
Query: 287 VMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD-------QGRIEEAKELVNQMSQMG 334
++ LCK ++E ++ + D+ +++ G + +A L +M Q
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 335 CIPDVVTYTAVVNGFCR------------------------------------VGELDQA 358
+PD TYT++++G CR G+
Sbjct: 644 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 703
Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
+QM + G P+ V+ A ++G GK + +++ + PN TY++++HG
Sbjct: 704 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 763
Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
+ +S + + R ++ G P + + L+ +C ++ K ++ + +G V+
Sbjct: 764 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823
Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
F LI C G++ A L+ M D T ++ L++N R +E+ ++
Sbjct: 824 RYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH 883
Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFG 596
+M +G+ P Y +I+ C+VG ++ + E+M++ + C A + ++ L G
Sbjct: 884 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 943
Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
+EA +L +L+ ++ L+ G + A ++ M N L DL
Sbjct: 944 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL---- 999
Query: 657 KVSERLILEGKSEEAD 672
VS +++ G + D
Sbjct: 1000 -VSYNVLITGLCAKGD 1014
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/547 (21%), Positives = 227/547 (41%), Gaps = 56/547 (10%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
+ D + +++ L K A+ +R M GI +F L+ Y +G+ A
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 563
Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
V M K P + + L G L +A +FL+ + + + YN L+
Sbjct: 564 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623
Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
C + A+ L EM + PD +Y +++ LC++ + ++ N+ +
Sbjct: 624 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683
Query: 317 Q-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
+ G+ + QM +G PD+VT A+++G+ R+G++++ +L
Sbjct: 684 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 743
Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
+M + PN +Y L+G + + + P+ +T ++ G+
Sbjct: 744 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 803
Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCA------- 476
L +++ + +G N+LI C G+++ A ++ + G +
Sbjct: 804 MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 863
Query: 477 --VNVVN--------------------------FTSLIRGFCQKGDLEEALSLLDDMYLC 508
V+V+N + LI G C+ GD++ A + ++M
Sbjct: 864 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923
Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
K P V + ++ AL+K G+ +EAT L+ ML LVPT+ ++ T++H C+ G V +
Sbjct: 924 KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 983
Query: 569 LKLLEKMLSKQKCR-----TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
L+L M C +YN +I LC+ G + A ++ ++ A+A+T L
Sbjct: 984 LELRVVM---SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKAL 1040
Query: 624 VESYLNK 630
+ L +
Sbjct: 1041 IRGLLAR 1047
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 204/468 (43%), Gaps = 17/468 (3%)
Query: 124 ALQFFYWADRQWRYRHDP--IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY 181
L+ F D + H P Y +L+ L K + A++ L+ + ++
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 618
Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
L+ A ++G L A+ + M + ++ P+ + I L K A+ F + + G
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Query: 242 -ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEV 300
+ PN + Y C + G + K I ++M G +PD V+ ++ + +I++
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738
Query: 301 RDLMEKMVNDSN---------LFHDQGR---IEEAKELVNQMSQMGCIPDVVTYTAVVNG 348
DL+ +M N + L H + + + L + G +PD +T ++V G
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798
Query: 349 FCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
C L+ K+L+ G + + ++ ++ C NG+ A +++ + +
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858
Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
T ++ L R + E+ V+ EM K+G P + LI LCR G + A +
Sbjct: 859 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918
Query: 469 ECL-NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
E + +K C NV ++++R + G +EA LL M K P ++TT++ KN
Sbjct: 919 EMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 977
Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
G V EA EL + M + GL +V+Y +I C G + +L E+M
Sbjct: 978 GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 245/510 (48%), Gaps = 26/510 (5%)
Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
A+ F R R R I + + ++++TK + + M +GI S ++
Sbjct: 56 AVDLFQEMTRS-RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
R KL A + + K P+ + +T I+ L + ++++AL ++RM G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
P ++T N L+ G C ++ DA+ LID M G P++V+Y V+ +CK
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK---------- 224
Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
G+ A EL+ +M + D V Y+ +++G C+ G LD A +
Sbjct: 225 -------------SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
+M G K + + YT + G C+ G+ + +++ + TP+ + +S ++ +EG
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
KL EA ++ +EM+++G P V LI C+E ++D A + ++KGC N+ F
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
LI G+C+ +++ L L M L DTVTY T+I + G++E A EL +M+S+
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM-LSKQKCRTA-YNQVIENLCSFGYLEEA 601
+ P +V+Y+ ++ C G E L++ EK+ SK + YN +I +C+ +++A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKG 631
+ + K D T ++++ KG
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541
Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 252/504 (50%), Gaps = 14/504 (2%)
Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
+A+ + M ++ P L+ + V+ + L ++M+L GI N+ T + +I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-- 311
C ++ A + ++ G PD V++ T++ LC E R+ E +L+++MV
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 312 ----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
N G++ +A L+++M + G P+ VTY V+ C+ G+ A ++
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
L++M K + V Y+ ++GLC +G A + N E + + + I Y+ ++ G
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
G+ + ++R+M+K+ P V + LI +EGK+ A++ +E + +G + + V
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
+TSLI GFC++ L++A +LD M P+ T+ +I+ K +++ EL KM
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 542 SKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLE 599
+G+V VTY T+I +C++G++E +L ++M+S++ +Y +++ LC G E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVS 659
+A +I K+ ++ + D ++++ N A+ + C + + + PD+K +
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 660 ERLILEGKSEEADTLMLRFVERGH 683
L +G EAD L + E GH
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGH 558
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 207/418 (49%), Gaps = 16/418 (3%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
++ + + Y +L+++ K+ A +LR M R I+ +S ++ + G L NA
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
+ + M+ +++I T I + + L M ITP+V+ ++ LI +
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
++++A +L EM +G SPD V+Y +++ CKE ++ + +++ MV+
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
N + I++ EL +MS G + D VTY ++ GFC +G+L+ AK++ Q+
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
M +P+ VSY L+GLC NG+ +A E+ E+ + Y++++HG+ K
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
+ +A D+ + KG P N++I LC++G + A ++ G + N +
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
LIR +GD ++ L++++ C D T ++D LS +GR++++ + MLS
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS-DGRLKKS---FLDMLS 621
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 130/302 (43%), Gaps = 38/302 (12%)
Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
K +A D+ +EM + P ++ + L + R + D ++ KG A N+ +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
+I C+ L A S + + +PDTVT++T+I+ L GRV EA EL+ +M+
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS--------------KQKCRTA----- 584
G PT++T +++ C G+V D + L+++M+ K C++
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 585 ------------------YNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
Y+ +I+ LC G L+ A + ++ KAD L+
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
+ G K+ M R + PD+ + + + EGK EA+ L ++RG I P
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG-ISP 350
Query: 687 KS 688
+
Sbjct: 351 DT 352
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%)
Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNA 195
R R D + Y ++L+ L + A + + + +E ++ ++ A K+ +A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
+ + V P++ N I L L++A +M+ G +PN TYN LI+
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLM 304
+ + KLI+E+ G S D + V+ L + K D++
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDML 620
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 236/499 (47%), Gaps = 33/499 (6%)
Query: 214 CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
CN I V V N+ A+ +M++ I N+ ++N LIK +CD H++ ++ ++
Sbjct: 109 CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL----FHDQ------------ 317
G PD V++ T++ LC E RI E L MV L DQ
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228
Query: 318 -----------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
GR+ EA LVN+M G DVVTY +VNG C++G+ A +L +M
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
KP+ V Y+A ++ LC +G +A+ + + E+ PN TY+ ++ G G+ S
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
+A ++R+M+++ P + N LI + +EGK+ A+K E L++ + V + S+I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
GFC+ ++A + D M PD VT+ TIID + RV+E +L+ ++ +GLV
Sbjct: 409 YGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKI 604
TY T+IH +C+V + L ++M+S C N ++ C LEEA ++
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
+ + D ++++ A+ + C + + PD++ +
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Query: 665 EGKSEEADTLMLRFVERGH 683
+ +A+ L + + GH
Sbjct: 585 KSAISDANVLFHKMKDNGH 603
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/531 (24%), Positives = 241/531 (45%), Gaps = 70/531 (13%)
Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
A + R M R I +F+ L+ + KL ++ + K P+++ NT +H
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 220 VLVVGNKLAKALR---------FLERMQL------AGITPNVLTYNCLIKGYCDLHRIKD 264
L + +++++AL FLE + L G+TP V+T+N LI G C R+ +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD-------- 316
A L+++M KG D V+Y T++ +CK K +L+ KM ++++ D
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM-EETHIKPDVVIYSAII 303
Query: 317 -----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC--------------------- 350
G +A+ L ++M + G P+V TY +++GFC
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 351 --------------RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
+ G+L +A+K+ +M H P+TV+Y + + G C + + +A+ M
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
+ +P+ +T++ ++ R ++ E ++RE+ ++G N LI C
Sbjct: 424 FDL----MASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
++ A+ QE ++ G + + L+ GFC+ LEEAL L + + + K D DTV
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML 576
Y II + K +V+EA +L + G+ P V TY +I +C + D L KM
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 577 SK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
+ + YN +I G ++++ +++ ++ DA T ++ +
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 193/407 (47%), Gaps = 9/407 (2%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
D + Y ++ + K + A +L M I+ +S ++ + G +A Y+
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
S M + +APN+ N I + + A R L M I P+VLT+N LI
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
++ +A KL DEM + PD V+Y +++ CK R + + + + M +
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439
Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
+++ R++E +L+ ++S+ G + + TY +++GFC V L+ A+ + Q+M HG
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
P+T++ L G C N K EA E+ + + + Y++++HG+ + K+ EA D+
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
+ G P N++I C + + A + + G + + +LIRG +
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619
Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
G++++++ L+ +M D T + D ++ +GR++++ M+
Sbjct: 620 AGEIDKSIELISEMRSNGFSGDAFTIKMVADLIT-DGRLDKSFSDML 665
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 115/279 (41%), Gaps = 18/279 (6%)
Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
L +A D MV+ F T V+ N +I R + D A ++ + +N+ +F
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE------------- 531
LI+ FC L +LS + PD VT+ T++ L R+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 532 --EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
EA L +M+ GL P V+T+ T+I+ C GRV + L+ KM+ K Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 588 VIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRN 647
++ +C G + A +L K+ T K D +++ G A + M +
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 648 LIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
+ P++ + + G+ +A L+ +ER I P
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINP 364
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/635 (24%), Positives = 291/635 (45%), Gaps = 55/635 (8%)
Query: 104 RSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRV 163
+SL P+ + +L+S+ + R A F A R Y H +VY+ +L LS+T++ R+
Sbjct: 6 KSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRI 65
Query: 164 LRLM----------------------------------ARRGIECRPEAFSY--LMVAYS 187
+ L+ R C P SY L+ A+
Sbjct: 66 VELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125
Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
A + + + + A VAPNL N I + + KA FL+ M G P+V
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
+Y+ +I ++ DA++L DEM +G +PD Y ++ KEK K +L +++
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 308 VNDSNLFHDQ-------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGE 354
+ DS+++ + GR+++ ++ +M Q D+ TY+++++G C G
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 355 LDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSV 414
+D+A+ + ++ + V+Y L G C GK E+ E+ E + + N ++Y++
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK-NSVNIVSYNI 364
Query: 415 VMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKG 474
++ GL GK+ EA + R M KG+ + I LC G ++ A MQE + G
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 475 CAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEAT 534
++V + S+I C+K LEEA +L+ +M + ++ +I L ++ R+ EA+
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS 484
Query: 535 ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS---KQKCRTAYNQVIEN 591
+ +M G PTVV+Y +I C+ G+ + +++ML K +T Y+ ++
Sbjct: 485 FFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT-YSILLCG 543
Query: 592 LCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
LC ++ A ++ + L++ + D ++L+ + G A V M +RN +
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 652 LKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
L + E G S A T++ ++ + +QP
Sbjct: 604 LVTYNTLMEGFFKVGDSNRA-TVIWGYMYKMGLQP 637
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 197/429 (45%), Gaps = 17/429 (3%)
Query: 146 MMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKA 205
+M+ LSK ++ M + E +S L+ AG + A V + + +
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319
Query: 206 AVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDA 265
+ +++ NT + K+ ++L M+ + N+++YN LIKG + +I +A
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEA 378
Query: 266 IKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH---------- 315
+ MP KG + DK +Y + LC + + +M+++ +
Sbjct: 379 TMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDC 438
Query: 316 --DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
+ R+EEA LV +MS+ G + A++ G R L +A L++M +GC+P
Sbjct: 439 LCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPT 498
Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
VSY + GLC GK EA + E W P+ TYS+++ GL R+ K+ A ++
Sbjct: 499 VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWH 558
Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
+ ++ G + N+LI LC GK+D A M ++ C N+V + +L+ GF + G
Sbjct: 559 QFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618
Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTY- 552
D A + MY PD ++Y TI+ L V A E + G+ PTV T+
Sbjct: 619 DSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWN 678
Query: 553 ---RTVIHR 558
R V++R
Sbjct: 679 ILVRAVVNR 687
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
Y D Y + + L A V++ + G A++ ++ + +L A
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEAS 449
Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
++ M K V N +CN I L+ ++L +A FL M G P V++YN LI G
Sbjct: 450 NLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGL 509
Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
C + +A + EM G PD +Y ++ LC++++I DL
Sbjct: 510 CKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI----DL------------- 552
Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
A EL +Q Q G DV+ + +++G C VG+LD A ++ M H C N V+
Sbjct: 553 ------ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
Y + G G S A + + P+ I+Y+ +M GL +S A + +
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666
Query: 437 KKGFFPTPVEINLLIQSL 454
G FPT N+L++++
Sbjct: 667 NHGIFPTVYTWNILVRAV 684
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 164/401 (40%), Gaps = 50/401 (12%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
D Y ++ L A+ V + R ++ ++ + R GK++ ++ +
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
+M+ + N++ N I L+ K+ +A M G + TY I G C
Sbjct: 349 RIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
+ A+ ++ E+ G D +Y +++ LCK+KR++E +L+++M
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
L D R+ EA + +M + GC P VV+Y ++ G C+ G+ +A +++M
Sbjct: 468 NALIGGLIRDS-RLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526
Query: 367 HHGCKPNTVSYTAFLNGLC--------------------------HN---------GKSL 391
+G KP+ +Y+ L GLC HN GK
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLD 586
Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
+A ++ E T N +TY+ +M G + G + A + M K G P + N ++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
+ LC + A +F + N G V + L+R +
Sbjct: 647 KGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 248/517 (47%), Gaps = 32/517 (6%)
Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLS 200
P +Y + ++SK + + AK + M G+ + +A++ L+ Y R +R +L
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
M+K + + T + + L A ++ M +G PNV+ Y LIK +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRI 320
R DA++++ EM +G +PD Y +++ L K KR+ E R + +MV +
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN---------- 516
Query: 321 EEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAF 380
G P+ TY A ++G+ E A K +++M G PN V T
Sbjct: 517 -------------GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 381 LNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
+N C GK +EA + ++ +A TY+V+M+GL + K+ +A ++ REM KG
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 441 FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALS 500
P +LI + G M A E + +G NV+ + L+ GFC+ G++E+A
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 501 LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC 560
LLD+M + P+ VTY TIID K+G + EA L +M KGLVP Y T++ C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 561 QVGRVEDLLKLLEKMLSKQKCRTA---YNQVIENLCSFGYLEEAGKILGKVLRTA----S 613
++ VE + + +K+ C ++ +N +I + FG E ++L +++ +
Sbjct: 744 RLNDVERAITIFGT--NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIP 650
K + T +++++ +G A ++ +M N NL+P
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838
Score = 209 bits (531), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 148/560 (26%), Positives = 258/560 (46%), Gaps = 29/560 (5%)
Query: 141 PIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYV 198
P Y +++ + + GA +++ M G CRP Y L+ + + + +AM V
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASG--CRPNVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
L M++ +AP++ N+ I L ++ +A FL M G+ PN TY I GY +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
A K + EM G P+KV ++ CK+ ++ E MV+
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 312 -----NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
N ++++A+E+ +M G PDV +Y ++NGF ++G + +A + +M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
G PN + Y L G C +G+ +A+E+++ + PNA+TY ++ G + G L+
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
EA + EM KG P L+ CR ++ A KGCA + F +LI
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALI 773
Query: 487 RGFCQKGDLE---EALS-LLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
+ G E E L+ L+D + P+ VTY +ID L K G +E A EL +M +
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
L+PTV+TY ++++ Y ++GR ++ + ++ ++ + Y+ +I G +
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893
Query: 601 AGKILGKVLRTASKADA-----STCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD-LKL 654
A ++ ++ + D STC L+ + G +A KV M IPD +
Sbjct: 894 ALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATV 953
Query: 655 CKKVSERLILEGKSEEADTL 674
+ ++E I + EAD +
Sbjct: 954 IELINESCISSNQRVEADAV 973
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 222/463 (47%), Gaps = 26/463 (5%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
D Y ++ LSK K A+ L M G+ +P AF+Y + Y A + +A
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL--KPNAFTYGAFISGYIEASEFASADK 543
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
+ M++ V PN ++C I+ K+ +A M GI + TY L+ G
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
++ DA ++ EM KG +PD SY ++ K +++ + ++MV +
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 312 --NL----FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
N+ F G IE+AKEL+++MS G P+ VTY +++G+C+ G+L +A ++ +M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
G P++ YT ++G C A + T+++ + A ++ +++ + + GK
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTA-PFNALINWVFKFGKT 782
Query: 426 SEACDVVREMVKKGF----FPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
+V+ ++ F P V N++I LC+EG ++ AK+ + N V+
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKML 541
+TSL+ G+ + G E + D+ +PD + Y+ II+A K G +A L+ +M
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 542 SKGLVP-----TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ 579
+K V ++ T R ++ + +VG +E K++E M+ Q
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 199/435 (45%), Gaps = 53/435 (12%)
Query: 110 QICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMAR 169
+ C+ RS D+ + D Y +++ L K A+ + R M
Sbjct: 575 EACSAYRSMVDQGIL--------------GDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 170 RGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
+GI P+ FSY L+ +S+ G ++ A + M + + PN++I N + ++
Sbjct: 621 KGIA--PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
KA L+ M + G+ PN +TY +I GYC + +A +L DEM LKG PD Y T+
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
+ C+ +ND +E A + ++ GC + A++N
Sbjct: 739 VDGCCR--------------LND---------VERAITIFGT-NKKGCASSTAPFNALIN 774
Query: 348 GFCRVGELDQAKKMLQQM----YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEE 403
+ G+ + ++L ++ + KPN V+Y ++ LC G A+E+ + +
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834
Query: 404 WWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGA 463
P ITY+ +++G + G+ +E V E + G P + +++I + +EG A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Query: 464 -----KKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
+ F + ++ GC +++ +L+ GF + G++E A ++++M + PD+ T
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954
Query: 519 TIID--ALSKNGRVE 531
+I+ +S N RVE
Sbjct: 955 ELINESCISSNQRVE 969
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 144/629 (22%), Positives = 250/629 (39%), Gaps = 73/629 (11%)
Query: 101 NLLRSLKPRQICAVLRSQ--ADERVALQFFYWADRQWRYRHDPIVY-YMMLEILSKTKLC 157
NL + P + +VLRS+ D L FF W D Q + ++ L++ +
Sbjct: 55 NLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFE 114
Query: 158 QGAKRVLRLMARRG---------IECRPE---------AFSYLMVAYSRAGKLRNAMYVL 199
+ V R++ R + C E F L Y G + A++V
Sbjct: 115 KALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVF 174
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
S + P L C + L+ N+L + M + +V TY+ LI +C
Sbjct: 175 SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRA 234
Query: 260 HRIK---------------------DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
++ A+KL + M KG P K +Y ++ LCK KR+
Sbjct: 235 GNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL- 293
Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
E+AK L+ +M +G D TY+ +++G + D A
Sbjct: 294 ----------------------EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
K ++ +M HG Y + + G +A+ + + P A Y+ ++ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
RE + + +++ EM K+ +P +++ +C G +DGA ++E + GC N
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
VV +T+LI+ F Q +A+ +L +M PD Y ++I LSK R++EA ++
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQV-----IENLC 593
+M+ GL P TY I Y + K +++M ++C N+V I C
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM---RECGVLPNKVLCTGLINEYC 568
Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
G + EA ++ DA T VL+ A ++ M + + PD+
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 654 LCKKVSERLILEGKSEEADTLMLRFVERG 682
+ G ++A ++ VE G
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEG 657
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 252/515 (48%), Gaps = 15/515 (2%)
Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
KL +A+ + M ++ P+++ N + + NK + ERMQ I+ ++ +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM--- 307
LI +C ++ A+ ++ +M G PD V+ +++ C KRI E L+++M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 308 ------VNDSNLFHD---QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
V + L H + EA L+++M GC PD+ TY VVNG C+ G++D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
+L++M + + V YT ++ LC+ +A + + + PN +TY+ ++
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
L G+ S+A ++ +M+++ P V + LI + +EGK+ A+K E + + +
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMM 538
+ ++SLI GFC L+EA + + M P+ VTY T+I K RVEE EL
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 539 KMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFG 596
+M +GLV VTY T+I Q G + K+ +KM+S Y+ +++ LC +G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
LE+A + + ++ + D T ++++E G + + C + + + P++ +
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 657 KVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
+ +G EEAD L E G + P S +
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTL-PNSGTY 573
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 243/506 (48%), Gaps = 14/506 (2%)
Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
+ R +D Y +++ + A VL M + G E S L+ Y ++
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 166
Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
A+ ++ M PN + NT IH L + NK ++A+ ++RM G P++ TY +
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 226
Query: 253 IKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS- 311
+ G C I A+ L+ +M D V Y T++ LC K + + +L +M N
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 312 -----------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
+ GR +A L++ M + P+VVT++A+++ F + G+L +A+K
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
+ +M P+ +Y++ +NG C + + EA+ M + PN +TY+ ++ G
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
+ ++ E ++ REM ++G V N LIQ L + G D A+K ++ ++ G +++
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
++ L+ G C+ G LE+AL + + + K +PD TY +I+ + K G+VE+ +L +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLCSFGYL 598
KG+ P V+ Y T+I +C+ G E+ L +M + YN +I G
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Query: 599 EEAGKILGKVLRTASKADASTCHVLV 624
+ +++ ++ DAST +++
Sbjct: 587 AASAELIKEMRSCGFVGDASTISMVI 612
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 212/417 (50%), Gaps = 23/417 (5%)
Query: 167 MARRGIECRPEAFSYLMV--AYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVG 224
M RG C+P+ F+Y V + G + A+ +L M+K + +++I T I L
Sbjct: 211 MVARG--CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 268
Query: 225 NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSY 284
+ AL M GI PNV+TYN LI+ C+ R DA +L+ +M + +P+ V++
Sbjct: 269 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 328
Query: 285 YTVMGYLCKEKRIKEVRDLMEKMVN---DSNLF-----------HDQGRIEEAKELVNQM 330
++ KE ++ E L ++M+ D ++F HD R++EAK + M
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD--RLDEAKHMFELM 386
Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
C P+VVTY ++ GFC+ +++ ++ ++M G NTV+Y + GL G
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
A+++ + P+ ITYS+++ GL + GKL +A V + K P N++
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 451 IQSLCREGKM-DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
I+ +C+ GK+ DG F L KG NV+ +T++I GFC+KG EEA +L +M
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSL-KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVE 566
P++ TY T+I A ++G + EL+ +M S G V T VI+ GR+E
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLE 621
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 188/396 (47%), Gaps = 28/396 (7%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
D ++Y +++ L K A + M +GI RP +Y L+ G+ +A
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI--RPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
+LS M + + PN++ + I V KL +A + + M I P++ TY+ LI G+C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
R+ +A + + M K C P+ V+Y T++ CK KR+
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV-------------------- 411
Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
EE EL +MSQ G + + VTY ++ G + G+ D A+K+ ++M G P+ ++Y
Sbjct: 412 ---EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
+ L+GLC GK +A + ++ P+ TY++++ G+ + GK+ + D+ +
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
KG P + +I CR+G + A +E G N + +LIR + GD
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAA 588
Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
+ L+ +M C D T + +I+ L +GR+E++
Sbjct: 589 SAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 243/488 (49%), Gaps = 16/488 (3%)
Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
F+ L+ A ++ K + + MQ+ ++ NL N I+ ++++ AL L +M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
G P+++T + L+ GYC RI DA+ L+D+M G PD +++ T++ L +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 299 EVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
E L+++MV N +G I+ A L+N+M DVV + ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
+ C+ +D A + ++M G +PN V+Y++ ++ LC G+ +A ++++ E+
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
PN +T++ ++ +EGK EA + +M+K+ P N LI C ++D AK+
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
+ ++K C ++ + +LI+GFC+ +E+ L +M DTVTYTT+I L
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--- 583
+G + A ++ +M+S G+ P ++TY ++ C G++E L++ + M K + +
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIY 431
Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
Y +IE +C G +++ + + K + T + ++ +K + AY + +M
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Query: 644 FNRNLIPD 651
+PD
Sbjct: 492 KEDGPLPD 499
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 222/449 (49%), Gaps = 12/449 (2%)
Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
H+ Y +++ + A +L M + G E S L+ Y ++ +A+ +
Sbjct: 43 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 102
Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
+ M + P+ + T IH L + NK ++A+ ++RM G PN++TY ++ G C
Sbjct: 103 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 162
Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VN 309
I A L+++M D V + T++ LCK + + + +L ++M V
Sbjct: 163 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 222
Query: 310 DSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
S+L GR +A +L++ M + P++VT+ A+++ F + G+ +A+K+ M
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
P+ +Y + +NG C + + +A++M + P+ TY+ ++ G + ++
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342
Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
+ ++ REM +G V LIQ L +G D A+K ++ ++ G +++ ++ L+
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
G C G LE+AL + D M + D YTT+I+ + K G+V++ +L + KG+
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
P VVTY T+I C +++ LL+KM
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 206/422 (48%), Gaps = 20/422 (4%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
YR D I + ++ L A ++ M +RG C+P +Y +V + G +
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDIDL 168
Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
A +L+ M+ A + +++I NT I L + AL + M+ GI PNV+TY+ LI
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DS 311
C R DA +L+ +M K +P+ V++ ++ KE + E L + M+ D
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 312 NLF-----------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
++F HD R+++AK++ M C PD+ TY ++ GFC+ ++ +
Sbjct: 289 DIFTYNSLINGFCMHD--RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
+ ++M H G +TV+YT + GL H+G A+++ + P+ +TYS+++ GL
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
GKL +A +V M K +I+ +C+ GK+D KG NVV
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
+ ++I G C K L+EA +LL M PD+ TY T+I A ++G + EL+ +M
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Query: 541 LS 542
S
Sbjct: 527 RS 528
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 206/431 (47%), Gaps = 27/431 (6%)
Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
P++ +N L+ + + I L ++M G S + +Y ++ C+
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCR---------- 57
Query: 304 MEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQ 363
+ +I A L+ +M ++G P +VT ++++NG+C + A ++
Sbjct: 58 -------------RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 104
Query: 364 QMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREG 423
QM G +P+T+++T ++GL + K+ EA +++ + PN +TY VV++GL + G
Sbjct: 105 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
+ A +++ +M V N +I SLC+ +D A +E KG NVV ++
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
SLI C G +A LL DM K +P+ VT+ +IDA K G+ EA +L M+ +
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEE 600
+ P + TY ++I+ +C R++ ++ E M+SK C YN +I+ C +E+
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD-CFPDLDTYNTLIKGFCKSKRVED 343
Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSE 660
++ ++ D T L++ + G A KV +M + + PD+ + +
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 661 RLILEGKSEEA 671
L GK E+A
Sbjct: 404 GLCNNGKLEKA 414
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 164/354 (46%), Gaps = 12/354 (3%)
Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
+P + + +++ ++ + D + ++M G N +Y +N C + A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
++ + + P+ +T S +++G ++S+A +V +MV+ G+ P + LI L
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
K A + + +GC N+V + ++ G C++GD++ A +LL+ M K + D V
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
+ TIID+L K V++A L +M +KG+ P VVTY ++I C GR D +LL M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 576 LSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY-----L 628
+ K+ +N +I+ G EA K+ +++ + D T + L+ + L
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 629 NKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
+K + + M +++ PDL + + + E+ L RG
Sbjct: 307 DKAKQMFEF-----MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 2/194 (1%)
Query: 435 MVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGD 494
MVK P+ E N L+ ++ + K D ++ G + N+ + LI FC++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 495 LEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
+ AL+LL M +P VT +++++ R+ +A L+ +M+ G P +T+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 555 VIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
+IH + + + L+++M+ + Q Y V+ LC G ++ A +L K+
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 613 SKADASTCHVLVES 626
+AD + +++S
Sbjct: 181 IEADVVIFNTIIDS 194
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 196/400 (49%), Gaps = 27/400 (6%)
Query: 172 IECRP----EAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
++CRP FS L+ A S+ K +Y+ MQ + NL CN ++ ++L
Sbjct: 73 VQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQL 132
Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
+ AL FL +M G P+++T+ L+ G+C R+ DA+ + D+M G P+ V Y T+
Sbjct: 133 SLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI 192
Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
+ LCK K++ + A +L+N+M + G PDVVTY ++++
Sbjct: 193 IDGLCKSKQV-----------------------DNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
G C G A +M+ M P+ ++ A ++ G+ EA E P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
+ +TYS++++GL +L EA ++ MV KG FP V ++LI C+ K++ K
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
E +G N V +T LI+G+C+ G L A + M C P+ +TY ++ L N
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
G++E+A ++ M G+ +VTY +I C+ G V D
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 187/373 (50%), Gaps = 2/373 (0%)
Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
N F ++ A + +M ++G P +VT+ +++NGFCR + A M QM G K
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
PN V Y ++GLC + + A +++N E++ P+ +TY+ ++ GL G+ S+A +
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
V M K+ +P N LI + +EG++ A++F +E + + ++V ++ LI G C
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 492 KGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVT 551
L+EA + M PD VTY+ +I+ K+ +VE +L +M +G+V VT
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 552 YRTVIHRYCQVGRVEDLLKLLEKML--SKQKCRTAYNQVIENLCSFGYLEEAGKILGKVL 609
Y +I YC+ G++ ++ +M+ YN ++ LC G +E+A IL +
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
+ AD T ++++ G A+ + C + + L+PD+ + L +G
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483
Query: 670 EADTLMLRFVERG 682
EAD L + E G
Sbjct: 484 EADALFRKMKEDG 496
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 163/322 (50%), Gaps = 23/322 (7%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAM 196
Y+ + ++Y +++ L K+K A +L M + GI ++ L+ +G+ +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
++S M K + P++ N I V ++++A F E M + P+++TY+ LI G
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
C R+ +A ++ M KGC PD V+Y ++ CK K++
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV------------------- 342
Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
E +L +MSQ G + + VTYT ++ G+CR G+L+ A+++ ++M G PN ++
Sbjct: 343 ----EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
Y L+GLC NGK +A ++ ++ + +TY++++ G+ + G++++A D+ +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 437 KKGFFPTPVEINLLIQSLCREG 458
+G P ++ L ++G
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKG 480
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 128/318 (40%), Gaps = 38/318 (11%)
Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
P+ +S ++ + + K + +M G N+L+ CR ++ A F
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
+ + + G ++V F SL+ GFC+ + +AL + D M P+ V Y TIID L K
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ------- 579
+ +V+ A +L+ +M G+ P VVTY ++I C GR D +++ M ++
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 580 ------KCR------------------------TAYNQVIENLCSFGYLEEAGKILGKVL 609
C Y+ +I LC + L+EA ++ G ++
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 610 RTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSE 669
D T +L+ Y K+ C M R ++ + + + GK
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 670 EADTLMLRFVERGHIQPK 687
A+ + R V G + P
Sbjct: 379 VAEEIFRRMVFCG-VHPN 395
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 2/277 (0%)
Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
N Y ++ R KL ++ D+ MV+ P+ + + L+ ++ + K D
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
++ G N+ L+ FC+ L ALS L M +P VT+ ++++ +
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAY 585
RV +A + +M+ G P VV Y T+I C+ +V++ L LL +M Y
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
N +I LCS G +A +++ + + D T + L+++ + +G A + M
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
R+L PD+ + L + + +EA+ + V +G
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 101/249 (40%), Gaps = 37/249 (14%)
Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN-- 527
C ++ N ++ ++R + L+++L L M C+ P ++ ++ A+SK
Sbjct: 37 CFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKK 96
Query: 528 ---------------------------------GRVEEATELMMKMLSKGLVPTVVTYRT 554
++ A + KM+ G P++VT+ +
Sbjct: 97 YDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGS 156
Query: 555 VIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTA 612
+++ +C+ RV D L + ++M + + YN +I+ LC ++ A +L ++ +
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 613 SKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEAD 672
D T + L+ + G A ++ M R + PD+ + + + EG+ EA+
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 673 TLMLRFVER 681
+ R
Sbjct: 277 EFYEEMIRR 285
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 35/177 (19%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
D + Y +++ K+K + ++ M++RG+ ++ L+ Y RAGKL A +
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ--------------------- 238
M V PN++ N +H L K+ KAL L MQ
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Query: 239 --------------LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDK 281
G+ P++ TY ++ G ++A L +M G P++
Sbjct: 445 GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 146/578 (25%), Positives = 263/578 (45%), Gaps = 52/578 (8%)
Query: 99 LRNLLRSLKPRQICAVL-RSQADERVALQF-----FYWADRQWRYRHDPIVYYMMLEILS 152
+RN L L P + VL R + D + +F F++ + ++H + M+ IL
Sbjct: 69 VRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPN----FKHTSLSLSAMIHILV 124
Query: 153 KT-KLCQGAKRVLRLMARRGIE----------------CRPEAFSYLMVAYSRAGKLRNA 195
++ +L +LR++ R G+ F L+ Y +A KLR A
Sbjct: 125 RSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREA 184
Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
++++ ++ CN I LV + A + + +G+ NV T N ++
Sbjct: 185 HEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNA 244
Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
C +++ + ++ KG PD V+Y T++ + +
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI-----------------------SAYS 281
Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
+G +EEA EL+N M G P V TY V+NG C+ G+ ++AK++ +M G P++
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 376 SYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
+Y + L C G +E ++ + P+ + +S +M R G L +A +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 436 VKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDL 495
+ G P V +LIQ CR+G + A E L +GCA++VV + +++ G C++ L
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 496 EEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTV 555
EA L ++M PD+ T T +ID K G ++ A EL KM K + VVTY T+
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 556 IHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
+ + +VG ++ ++ M+SK+ T +Y+ ++ LCS G+L EA ++ +++
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
K C+ +++ Y G +M + +PD
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 238/511 (46%), Gaps = 16/511 (3%)
Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
A V + ++R G+ + ++ A + GK+ LS +Q+ V P+++ NT I
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
+ +A + M G +P V TYN +I G C + + A ++ EM G SP
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 280 DKVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSN---LFHDQGRIEEAKELV 327
D +Y +++ CK+ + E RD++ +V S+ LF G +++A
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
N + + G IPD V YT ++ G+CR G + A + +M GC + V+Y L+GLC
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
EA ++ N E P++ T ++++ G + G L A ++ ++M +K V
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY 518
Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
N L+ + G +D AK+ + ++K ++++ L+ C KG L EA + D+M
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
P + ++I ++G + + KM+S+G VP ++Y T+I+ + + +
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Query: 568 LLKLLEKMLSKQKCRT----AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
L++KM +Q YN ++ C ++EA +L K++ D ST +
Sbjct: 639 AFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCM 698
Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
+ ++++ A+++ M R PD K
Sbjct: 699 INGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 23/270 (8%)
Query: 141 PIVYYMMLEILSKTKL--CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
P Y + + I KL Q A + + M + I ++ L+ + + G + A +
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
+ M + P + + ++ L LA+A R + M I P V+ N +IKGYC
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQG 318
D +++M +G PD +SY T++ +E+ + + L++KM
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM----------- 646
Query: 319 RIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYT 378
EE Q G +PDV TY ++++GFCR ++ +A+ +L++M G P+ +YT
Sbjct: 647 --EE--------EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYT 696
Query: 379 AFLNGLCHNGKSLEAREMINTSEEEWWTPN 408
+NG EA + + + ++P+
Sbjct: 697 CMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 25/243 (10%)
Query: 133 RQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKL 192
++ R R D + Y +L+ K AK + M + I P ++S L+ A G L
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 193 RNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCL 252
A V M + P ++ICN+ I + FLE+M G P+ ++YN L
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626
Query: 253 IKGYCDLHRIKDAIKLIDEMPLK--GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
I G+ + A L+ +M + G PD +Y +++ C++ ++KE ++ KM+
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI-- 684
Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
+ G PD TYT ++NGF L +A ++ +M G
Sbjct: 685 ---------------------ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Query: 371 KPN 373
P+
Sbjct: 724 SPD 726
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 22/289 (7%)
Query: 409 AITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN-----------------LLI 451
+++ S ++H L R G+LS+A + M+++ +N LLI
Sbjct: 113 SLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLI 172
Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
++ + K+ A + +KG V++ +LI + G +E A + ++
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232
Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
+ T +++AL K+G++E+ + ++ KG+ P +VTY T+I Y G +E+ +L
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292
Query: 572 LEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
+ M K YN VI LC G E A ++ ++LR+ D++T L+
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRF 678
KG + KV M +R+++PDL +C S + L +S D ++ F
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDL-VC--FSSMMSLFTRSGNLDKALMYF 398
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 99/260 (38%), Gaps = 26/260 (10%)
Query: 439 GF-FP----TPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
GF FP T + ++ +I L R G++ A+ + + + + SL F G
Sbjct: 103 GFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCG 162
Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
+ LL Y+ + ++ EA E + SKG ++
Sbjct: 163 SNDSVFDLLIRTYVQAR------------------KLREAHEAFTLLRSKGFTVSIDACN 204
Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKILGKVLRT 611
+I ++G VE + +++ Y N ++ LC G +E+ G L +V
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEK 264
Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
D T + L+ +Y +KG+ A+++ M + P + V L GK E A
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 672 DTLMLRFVERGHIQPKSEEH 691
+ + G + P S +
Sbjct: 325 KEVFAEMLRSG-LSPDSTTY 343
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 142/554 (25%), Positives = 260/554 (46%), Gaps = 55/554 (9%)
Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLV---VGNKLAKALRFLE 235
F + AY GK A+ + M + + PNLL CNT + LV ++ A +
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 236 RMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLK-GCSPDKVSYYTVMGYLCKE 294
M G++ NV T+N L+ GYC +++DA+ +++ M + +PD V+Y T++ + K+
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 295 KRIKEVRDLMEKM---------VNDSNLFHDQ---GRIEEAKELVNQMSQMGCIPDVVTY 342
R+ ++++L+ M V +NL + G ++EA ++V M Q +PD+ TY
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTY 313
Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
++NG C G + + +++ M +P+ V+Y ++G G SLEAR+++ E
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
Query: 403 E--------------W----------------------WTPNAITYSVVMHGLRREGKLS 426
+ W ++P+ +TY ++ + G LS
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLS 433
Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
A +++REM +KG + +N ++ +LC+E K+D A + +G V+ V + +LI
Sbjct: 434 GALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI 493
Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
GF ++ +E+AL + D+M K P T+ ++I L +G+ E A E ++ GL+
Sbjct: 494 MGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLL 553
Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY--NQVIENLCSFGYLEEAGKI 604
P T+ ++I YC+ GRVE + + + Y N ++ LC G E+A
Sbjct: 554 PDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNF 613
Query: 605 LGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLIL 664
++ + D T + ++ ++ AY + M + L PD L+
Sbjct: 614 FNTLIE-EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLME 672
Query: 665 EGKSEEADTLMLRF 678
+GK E D L+ +F
Sbjct: 673 DGKLSETDELLKKF 686
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 247/529 (46%), Gaps = 81/529 (15%)
Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
+++ D + Y +L+ +SK K +L M + G+ ++ L+ Y + G L+
Sbjct: 233 EFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLK 292
Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
A ++ +M++ V P+L N I+ L + + L ++ M+ + P+V+TYN LI
Sbjct: 293 EAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352
Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
G +L +A KL+++M G ++V++ + +LCKE++ + V
Sbjct: 353 DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV------------- 399
Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
+ KELV+ G PD+VTY ++ + +VG+L A +M+++M G K N
Sbjct: 400 ------TRKVKELVDMH---GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450
Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
T++ L+ LC K EA ++N++ + + + +TY ++ G RE K+ +A ++
Sbjct: 451 TITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWD 510
Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
EM K PT N LI LC GK + A + E G + F S+I G+C++G
Sbjct: 511 EMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEG 570
Query: 494 DLEEAL---------SLLDDMYLC-------------------------KKDPDTVTYTT 519
+E+A S D Y C +++ DTVTY T
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNT 630
Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKML--- 576
+I A K+ +++EA +L+ +M KGL P TY + I + G++ + +LL+K
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKF 690
Query: 577 -------------------SKQKCRT---AYNQVIENLCSFGYLEEAGK 603
SK++ T AY+ VI+ LCS G L+E +
Sbjct: 691 GSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSR 739
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 41/291 (14%)
Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
+L H P+ + L+ H GK A ++ PN +T + ++ GL
Sbjct: 118 LLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV 177
Query: 421 R---EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
R +S A +V +MVK G N+L+ C EGK
Sbjct: 178 RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK------------------ 219
Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYL-CKKDPDTVTYTTIIDALSKNGRVEEATEL 536
LE+AL +L+ M K +PD VTY TI+ A+SK GR+ + EL
Sbjct: 220 -----------------LEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKEL 262
Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCS 594
++ M GLVP VTY +++ YC++G +++ +++E M YN +I LC+
Sbjct: 263 LLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCN 322
Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
G + E +++ + + D T + L++ G+ L A K+ +M N
Sbjct: 323 AGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 205 bits (522), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 248/517 (47%), Gaps = 33/517 (6%)
Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
F+ L+ A ++ K + + MQ ++ +L + I+ ++L+ AL L +M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
G P+++T + L+ GYC RI DA+ L+D+M G PD ++ T++ L
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL------- 198
Query: 299 EVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQA 358
H++ EA LV+QM Q GC PD+VTY VVNG C+ G++D A
Sbjct: 199 --------------FLHNKA--SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 359 KKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHG 418
+L +M K N V + ++ LC A ++ E + PN +TY+ +++
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 419 LRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVN 478
L G+ S+A ++ M++K P V N LI + +EGK+ A+K +E + + +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 479 VVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATEL 536
+ + LI GFC L+EA + ++ KD P+ TY T+I+ K RVE+ EL
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFK--FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 537 MMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCS 594
+M +GLV VTY T+I + Q G + + ++M+S + Y+ ++ LCS
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 595 FGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKL 654
+G L+ A I + ++ + + + ++E G A+ + C + ++ PD+
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVT 537
Query: 655 CKKVSERLILEGKSEEADTLMLRFVERGHIQPKSEEH 691
+ L + +EAD L + E G + P S +
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTL-PNSGTY 573
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 222/474 (46%), Gaps = 13/474 (2%)
Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
M GI +S + + R +L A+ VL+ M K P+++ ++ ++ +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
++ A+ +++M G P+ T+ LI G ++ +A+ L+D+M +GC PD V+Y T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 287 VMGYLCKEKRIKEVRDLMEKM--------VNDSNLFHDQ----GRIEEAKELVNQMSQMG 334
V+ LCK I +L+ KM V N D +E A +L +M G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
P+VVTY +++N C G A ++L M PN V++ A ++ GK +EA
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
++ + P+ ITY+++++G +L EA + + MV K P N LI
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
C+ +++ + +E +G N V +T++I+GF Q GD + A + M + D
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468
Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
+TY+ ++ L G+++ A + + + + Y T+I C+ G+V + L
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528
Query: 575 MLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYL 628
+ K T YN +I LCS L+EA + K+ + ++ T + L+ + L
Sbjct: 529 LSIKPDVVT-YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 209/443 (47%), Gaps = 25/443 (5%)
Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
K+ +A+ + M K+ P+++ N + + NK + E+MQ GI+ ++ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
I +C ++ A+ ++ +M G PD V+ +++ C KRI
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI------------- 169
Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
+A LV+QM +MG PD T+T +++G + +A ++ QM GC
Sbjct: 170 ----------SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
+P+ V+Y +NGLC G A ++N E N + ++ ++ L + + A D
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
+ EM KG P V N LI LC G+ A + + L K NVV F +LI F
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
++G L EA L ++M DPDT+TY +I+ + R++EA ++ M+SK +P +
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKV 608
TY T+I+ +C+ RVED ++L +M + Y +I+ G + A + ++
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 609 LRTASKADASTCHVLVESYLNKG 631
+ D T +L+ + G
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYG 482
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 209/482 (43%), Gaps = 53/482 (10%)
Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
HD Y + + + A VL M + G E S L+ Y + ++ +A+ +
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA---------------------------- 230
+ M + P+ T IH L + NK ++A
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 231 -------LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVS 283
L L +M+ A I NV+ +N +I C ++ A+ L EM KG P+ V+
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 284 YYTVMGYLCKEKRIKE----VRDLMEKMVNDS--------NLFHDQGRIEEAKELVNQMS 331
Y +++ LC R + + +++EK +N + + F +G++ EA++L +M
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 332 QMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSL 391
Q PD +TY ++NGFC LD+AK+M + M C PN +Y +NG C +
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
+ E+ + N +TY+ ++ G + G A V ++MV + ++L+
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
LC GK+D A + +N+ + ++I G C+ G + EA L + +
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI---K 532
Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIH---RYCQVGRVEDL 568
PD VTY T+I L ++EA +L KM G +P TY T+I R C +L
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592
Query: 569 LK 570
+K
Sbjct: 593 IK 594
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 175/354 (49%), Gaps = 4/354 (1%)
Query: 276 GCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGC 335
G P S++ + G C E+ +++ N D ++++A +L M +
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILR--NRLSDIIKVDDAVDLFGDMVKSRP 79
Query: 336 IPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEARE 395
P +V + +++ ++ + + + +QM G + +Y+ F+N C + A
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 396 MINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLC 455
++ + + P+ +T S +++G ++S+A +V +MV+ G+ P LI L
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 456 REGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTV 515
K A + + + +GC ++V + +++ G C++GD++ AL+LL+ M + + V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259
Query: 516 TYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
+ TIID+L K VE A +L +M +KG+ P VVTY ++I+ C GR D +LL M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 576 LSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
L K+ +N +I+ G L EA K+ ++++ + D T ++L+ +
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 188/409 (45%), Gaps = 34/409 (8%)
Query: 136 RYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLR 193
R + + +++ +++ L K + + A + M +GI RP +Y L+ G+
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI--RPNVVTYNSLINCLCNYGRWS 310
Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
+A +LS M + + PN++ N I KL +A + E M I P+ +TYN LI
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
G+C +R+ +A ++ M K C P+ +Y T++ CK K
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK------------------ 412
Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
R+E+ EL +MSQ G + + VTYT ++ GF + G+ D A+ + +QM + +
Sbjct: 413 -----RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
++Y+ L+GLC GK A + ++ N Y+ ++ G+ + GK+ EA D+
Sbjct: 468 IMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFC 527
Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
+ K P V N +I LC + + A ++ G N + +LIR +
Sbjct: 528 SLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDC 584
Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
D + L+ +M D T + + + L +GR++++ + MLS
Sbjct: 585 DRAASAELIKEMRSSGFVGDASTISLVTNML-HDGRLDKS---FLNMLS 629
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 241/488 (49%), Gaps = 16/488 (3%)
Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
F+ L+ A ++ K + + MQ+ + L N I+ ++++ AL L +M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
G P+++T + L+ GYC RI DA+ L+D+M G PD +++ T++ L +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 299 EVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
E L+++MV N +G + A L+N+M DVV + ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
+ C+ +D A + ++M G +PN V+Y++ ++ LC G+ +A ++++ E+
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
PN +T++ ++ +EGK EA + +M+K+ P N L+ C ++D AK+
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
+ ++K C +VV + +LI+GFC+ +E+ L +M DTVTYTT+I L
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRT--- 583
+G + A ++ +M+S G+ P ++TY ++ C G++E L++ + M K + +
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIY 506
Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
Y +IE +C G +++ + + K + T + ++ +K + AY + +M
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Query: 644 FNRNLIPD 651
+P+
Sbjct: 567 KEDGPLPN 574
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 222/449 (49%), Gaps = 12/449 (2%)
Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
H Y +++ + A +L M + G E S L+ Y ++ +A+ +
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
+ M + P+ + T IH L + NK ++A+ ++RM G PN++TY ++ G C
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---------VN 309
A+ L+++M D V + T++ LCK + + + +L ++M V
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 310 DSNLFH---DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
S+L GR +A +L++ M + P++VT+ A+++ F + G+ +A+K+ M
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
P+ +Y + +NG C + + +A++M + P+ +TY+ ++ G + ++
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
+ ++ REM +G V LIQ L +G D A+K ++ ++ G +++ ++ L+
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 487 RGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLV 546
G C G LE+AL + D M + D YTT+I+ + K G+V++ +L + KG+
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 547 PTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
P VVTY T+I C +++ LL+KM
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 209/443 (47%), Gaps = 25/443 (5%)
Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
KL +A+ + M K+ P+++ N + + K + E+MQ I + TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
LI +C +I A+ L+ +M G P V+ +++ C KRI
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI------------- 171
Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
+A LV+QM +MG PD +T+T +++G + +A ++ +M GC
Sbjct: 172 ----------SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
+PN V+Y +NGLC G + A ++N E + + ++ ++ L + + +A +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
+ +EM KG P V + LI LC G+ A + + + + K N+V F +LI F
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
++G EA L DDM DPD TY ++++ + R+++A ++ M+SK P VV
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKV 608
TY T+I +C+ RVED +L +M + Y +I+ L G + A K+ ++
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 609 LRTASKADASTCHVLVESYLNKG 631
+ D T +L++ N G
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNG 484
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 207/422 (49%), Gaps = 20/422 (4%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
YR D I + ++ L A ++ M +RG C+P +Y +V + G
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDTDL 243
Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
A+ +L+ M+ A + +++I NT I L + AL + M+ GI PNV+TY+ LI
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVN---DS 311
C R DA +L+ +M K +P+ V++ ++ KE + E L + M+ D
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 312 NLF-----------HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKK 360
++F HD R+++AK++ M C PDVVTY ++ GFC+ ++ +
Sbjct: 364 DIFTYNSLVNGFCMHD--RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 361 MLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLR 420
+ ++M H G +TV+YT + GL H+G A+++ + P+ +TYS+++ GL
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
GKL +A +V M K +I+ +C+ GK+D KG NVV
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
+ ++I G C K L+EA +LL M P++ TY T+I A ++G + EL+ +M
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Query: 541 LS 542
S
Sbjct: 602 RS 603
Score = 169 bits (429), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 207/430 (48%), Gaps = 18/430 (4%)
Query: 259 LHRIK--DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS----- 311
LH +K DAI L M P V + ++ + K K+ V L EKM
Sbjct: 61 LHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 120
Query: 312 -------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
N F + +I A L+ +M ++G P +VT ++++NG+C + A ++ Q
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
M G +P+T+++T ++GL + K+ EA +++ + PN +TY VV++GL + G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
A +++ +M V N +I SLC+ +D A +E KG NVV ++S
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
LI C G +A LL DM K +P+ VT+ +IDA K G+ EA +L M+ +
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLEEA 601
+ P + TY ++++ +C R++ ++ E M+SK C YN +I+ C +E+
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD-CFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
++ ++ D T L++ + G A KV +M + + PD+ + +
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 662 LILEGKSEEA 671
L GK E+A
Sbjct: 480 LCNNGKLEKA 489
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 165/343 (48%), Gaps = 15/343 (4%)
Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
R + + Y ++ L A ++L M + I F+ L+ A+ + GK A
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
+ M K ++ P++ N+ ++ + ++L KA + E M P+V+TYN LIKG+C
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
R++D +L EM +G D V+Y T++ L + + + ++MV+D
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 312 ------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
+ + G++E+A E+ + M + D+ YT ++ G C+ G++D + +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
G KPN V+Y ++GLC EA ++ +E+ PN+ TY+ ++ R+G
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 591
Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQ 468
+ + +++REM F I L+ ++ +G++D K F+
Sbjct: 592 AASAELIREMRSCRFVGDASTIG-LVANMLHDGRLD--KSFLD 631
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 145/307 (47%), Gaps = 4/307 (1%)
Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
NGL H+ K +A + + P+ + ++ ++ + + K + +M +
Sbjct: 59 NGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIV 117
Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
N+LI CR ++ A + + + G ++V +SL+ G+C + +A++L
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
+D M PDT+T+TT+I L + + EA L+ +M+ +G P +VTY V++ C+
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 562 VGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
G + L LL KM + + +N +I++LC + ++++A + ++ + + T
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFV 679
L+ + G A ++ M + + P+L + + + EGK EA+ L +
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 680 ERGHIQP 686
+R I P
Sbjct: 358 KRS-IDP 363
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 7/195 (3%)
Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
++ ++R L++A+ L M + P V + ++ A++K + + L KM
Sbjct: 52 DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 111
Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYL 598
+V + TY +I+ +C+ ++ L LL KM L + + ++ C +
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
+A ++ +++ + D T L+ A + RM R P+L V
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL-----V 226
Query: 659 SERLILEGKSEEADT 673
+ +++ G + DT
Sbjct: 227 TYGVVVNGLCKRGDT 241
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 152/520 (29%), Positives = 235/520 (45%), Gaps = 78/520 (15%)
Query: 161 KRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHV 220
KRVL +M G P+ F+ L+ AY +G A +L M K P ++ N I
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416
Query: 221 LVVGNK-------LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMP 273
+ G+K L A + M AG+ N + + + C + + A +I EM
Sbjct: 417 -ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475
Query: 274 LKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDS-------NLFHDQGRIE 321
+G PD +Y V+ YLC +++ L E+M V D + F G IE
Sbjct: 476 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535
Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC----------- 370
+A++ N+M ++GC P+VVTYTA+++ + + ++ A ++ + M GC
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 371 ----------------------------------------KPNTVSYTAFLNGLCHNGKS 390
+PN V+Y A L+G C + +
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRV 655
Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
EAR++++ E PN I Y ++ GL + GKL EA +V EM + GF T + L
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSL 715
Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKK 510
I + + D A K + + L CA NVV +T +I G C+ G +EA L+ M
Sbjct: 716 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC 775
Query: 511 DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLK 570
P+ VTYT +ID G++E EL+ +M SKG+ P VTYR +I C+ G ++
Sbjct: 776 QPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHN 835
Query: 571 LLEKM-LSKQKCRTA-YNQVIENLC-----SFGYLEEAGK 603
LLE+M + TA Y +VIE S G L+E G+
Sbjct: 836 LLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQ 875
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 157/660 (23%), Positives = 277/660 (41%), Gaps = 77/660 (11%)
Query: 99 LRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQ 158
LR L + VLR A + FF WA RQ Y+H VY +++++ + +
Sbjct: 123 LRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEK 182
Query: 159 GAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAI 218
+ L+ + E E + L+ + R G A+ L ++ P+ N I
Sbjct: 183 VPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLI 242
Query: 219 HVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
+ ++L A M LA + + T C C + + ++A+ L++ +
Sbjct: 243 QAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFV 299
Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH------------DQGRIEEAKEL 326
PD V Y ++ LC+ +E D + +M S L + ++ ++ K +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 327 VNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCH 386
+N M GC P + ++V+ +C G+ A K+L++M G P V Y + +C
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 387 NGKSLEAREMINTSEEEWW-------TPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
+ SL ++++ +E+ + N I S L GK +A V+REM+ +G
Sbjct: 420 DKDSLNC-DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
F P + ++ LC KM+ A +E G +V +T ++ FC+ G +E+A
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
++M P+ VTYT +I A K +V A EL MLS+G +P +VTY +I +
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 560 CQVGRVEDLLKLLEKM-------------------------------------------- 575
C+ G+VE ++ E+M
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 576 ------LSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
+S + C + Y+ +I+ LC G L+EA ++ ++ A T L++
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718
Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
Y LA KV +M + P++ + ++ + L GK++EA LM E+G QP
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG-CQP 777
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 221/489 (45%), Gaps = 82/489 (16%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
D Y +M++ K L + A++ M R + C P +Y L+ AY +A K+ A
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTALIHAYLKAKKVSYANE 574
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM----QLAGIT---------- 243
+ M PN++ + I ++ KA + ERM + +
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 244 --PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
PNV+TY L+ G+C HR+++A KL+D M ++GC P+++ Y ++ LCK
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK-------- 686
Query: 302 DLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKM 361
G+++EA+E+ +MS+ G + TY+++++ + +V D A K+
Sbjct: 687 ---------------VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 362 LQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR 421
L +M + C PN V YT ++GLC GK+ EA +++ EE+ PN +TY+ ++ G
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 422 EGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVN 481
GK+ +++ M KG P V +LI C+ G +D A ++E +
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851
Query: 482 FTSLIRGFCQKGDLEEALSLLDDMYLCKKDP----------------------------- 512
+ +I GF + E+L LLD++ P
Sbjct: 852 YRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909
Query: 513 --------DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
+ TY ++I++L +VE A +L +M KG++P + ++ ++I + +
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 969
Query: 565 VEDLLKLLE 573
+ + L LL+
Sbjct: 970 ISEALLLLD 978
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 163/370 (44%), Gaps = 31/370 (8%)
Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
R + + Y +L+ K+ + A+++L M+ G E + L+ + GKL A
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
V + M + L ++ I + A + L +M PNV+ Y +I G C
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
+ + +A KL+ M KGC P+ V+Y ++ + F
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI-----------------------DGFGMI 792
Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
G+IE EL+ +M G P+ VTY +++ C+ G LD A +L++M +T Y
Sbjct: 793 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY 852
Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
+ G N + +E+ +++ ++ P Y +++ L + +L A ++ E+
Sbjct: 853 RKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 438 KGFFPTPVE----INLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
F T V+ N LI+SLC K++ A + E KG + +F SLI+G +
Sbjct: 911 --FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968
Query: 494 DLEEALSLLD 503
+ EAL LLD
Sbjct: 969 KISEALLLLD 978
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 145/310 (46%), Gaps = 15/310 (4%)
Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
IVY +++ L K A+ V M+ G +S L+ Y + + A VLS
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
M + + APN++I I L K +A + ++ M+ G PNV+TY +I G+ + +
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR-- 319
I+ ++L++ M KG +P+ V+Y ++ + CK + +L+E+M H G
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 320 -IE-------EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM--YHHG 369
IE E+ L++++ Q P + Y +++ + L+ A ++L+++ +
Sbjct: 855 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 370 CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA- 428
+ +Y + + LC K A ++ + ++ P ++ ++ GL R K+SEA
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Query: 429 --CDVVREMV 436
D + MV
Sbjct: 975 LLLDFISHMV 984
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 142/482 (29%), Positives = 243/482 (50%), Gaps = 26/482 (5%)
Query: 174 CRPEAFS----YLMVAYSRAG----KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGN 225
CR AFS Y R G +L +A+ + +M ++ P+++ + + + N
Sbjct: 33 CRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMN 92
Query: 226 KLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYY 285
K + F E+M++ GI+ N+ TYN LI +C R+ A+ L+ +M G PD V+
Sbjct: 93 KFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLN 152
Query: 286 TVMGYLCKEKRIKEVRDLMEKMV---------NDSNLFHD---QGRIEEAKELVNQMSQM 333
+++ C RI + L+++MV + L H + EA L+++M Q
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR 212
Query: 334 GCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEA 393
GC PD+VTY AVVNG C+ G+ D A +L +M + N V Y+ ++ LC +A
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 394 REMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQS 453
+ E + PN ITYS ++ L G+ S+A ++ +M+++ P V + LI +
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332
Query: 454 LCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD-- 511
++GK+ A+K +E + + N+ ++SLI GFC L EA +L+ M +KD
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM--IRKDCL 390
Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
P+ VTY T+I+ K RV++ EL +M +GLV VTY T+IH + Q ++ +
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 572 LEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
++M+S YN +++ LC G L +A + + R+ + D T ++++E
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Query: 630 KG 631
G
Sbjct: 511 AG 512
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/513 (24%), Positives = 233/513 (45%), Gaps = 26/513 (5%)
Query: 64 RRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERV 123
R +V+ + PL CR R A+S K + R +LR+ + + D+ +
Sbjct: 15 RSLVVRGNAATFPLSFSFCR----RRAFSGKTSYDYREVLRT-------GLSDIELDDAI 63
Query: 124 ALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLM 183
L + Q R I + +L ++K M GI ++ L+
Sbjct: 64 GL---FGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 184 VAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGIT 243
+ R +L A+ +L M K P+++ N+ ++ GN+++ A+ +++M G
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180
Query: 244 PNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL 303
P+ +T+ LI G ++ +A+ LID M +GC PD V+Y V+ LCK +L
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240
Query: 304 MEKMVN---DSNLFHDQGRIE---------EAKELVNQMSQMGCIPDVVTYTAVVNGFCR 351
+ KM ++N+ I+ +A L +M G P+V+TY+++++ C
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300
Query: 352 VGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAIT 411
G A ++L M PN V+++A ++ GK ++A ++ + PN T
Sbjct: 301 YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFT 360
Query: 412 YSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECL 471
YS +++G +L EA ++ M++K P V N LI C+ ++D + +E
Sbjct: 361 YSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMS 420
Query: 472 NKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVE 531
+G N V +T+LI GF Q D + A + M P+ +TY ++D L KNG++
Sbjct: 421 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 480
Query: 532 EATELMMKMLSKGLVPTVVTYRTVIHRYCQVGR 564
+A + + + P + TY +I C+ G+
Sbjct: 481 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 182/360 (50%), Gaps = 3/360 (0%)
Query: 329 QMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
+M ++G PD+VT +++NGFC + A ++ QM G KP+TV++T ++GL +
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
K+ EA +I+ + P+ +TY V++GL + G A +++ +M V +
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
+I SLC+ D A E NKG NV+ ++SLI C G +A LL DM
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
K +P+ VT++ +IDA K G++ +A +L +M+ + + P + TY ++I+ +C + R+ +
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 569 LKLLEKMLSKQ--KCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
++LE M+ K YN +I C +++ ++ ++ + + T L+
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 627 YLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQP 686
+ A V +M + + P++ + + L GK +A ++ +++R ++P
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA-MVVFEYLQRSTMEP 496
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 119/265 (44%), Gaps = 3/265 (1%)
Query: 424 KLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFT 483
+L +A + M + FP+ +E + L+ ++ + K D F ++ G + N+ +
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
LI FC+ L AL+LL M +PD VT ++++ R+ +A L+ +M+
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEA 601
G P VT+ T+IH + + + L+++M+ + Q Y V+ LC G + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
+L K+ +A+ +++S A + M N+ + P++ +
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 662 LILEGKSEEADTLMLRFVERGHIQP 686
L G+ +A L+ +ER I P
Sbjct: 298 LCNYGRWSDASRLLSDMIER-KINP 321
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 160 AKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
AK++L LM R+ +C P +Y L+ + +A ++ M + M + + N + T
Sbjct: 377 AKQMLELMIRK--DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
IH A ++M G+ PN+LTYN L+ G C ++ A+ + + +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 278 SPDKVSYYTVMGYLCKEKRIK 298
PD +Y ++ +CK + K
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWK 515
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 224/441 (50%), Gaps = 22/441 (4%)
Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
F+ L+ A + K + + M+ + +L N I+ +++ AL L +M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
G P+ +T L+ G+C +R+ DA+ L+D+M G PD V+Y ++ LCK KR+
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 299 EVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
+ D +++ N + R +A L++ M + P+V+TY+A++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
+ F + G++ +AK++ ++M P+ V+Y++ +NGLC + + EA +M + +
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKF 466
+ ++Y+ +++G + ++ + + REM ++G V N LIQ + G +D A++F
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
+ G + ++ + L+ G C G+LE+AL + +DM + D D VTYTT+I + K
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----LSKQKCR 582
G+VEEA L + KGL P +VTY T++ C G + ++ L KM L K C
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Query: 583 ------TAYNQVIENLCSFGY 597
T ++I+ + S GY
Sbjct: 508 LSDGDITLSAELIKKMLSCGY 528
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 222/447 (49%), Gaps = 25/447 (5%)
Query: 188 RAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVL 247
R KL +A+ + S M K+ P+++ N + +V K + ++M++ GI ++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 248 TYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
T+N +I +C ++ A+ ++ +M G PD+V+ +++ C+
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR-------------- 167
Query: 308 VNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYH 367
+ R+ +A LV++M ++G PD+V Y A+++ C+ ++ A +++
Sbjct: 168 ---------RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218
Query: 368 HGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSE 427
G +PN V+YTA +NGLC++ + +A +++ ++ TPN ITYS ++ + GK+ E
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIR 487
A ++ EMV+ P V + LI LC ++D A + ++KGC +VV++ +LI
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 488 GFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVP 547
GFC+ +E+ + L +M +TVTY T+I + G V++A E +M G+ P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 548 TVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKIL 605
+ TY ++ C G +E L + E M ++ Y VI +C G +EEA +
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 606 GKVLRTASKADASTCHVLVESYLNKGI 632
+ K D T ++ KG+
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 198/418 (47%), Gaps = 31/418 (7%)
Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
A +L M + G E L+ + R ++ +A+ ++ M + P+++ N I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
L ++ A F + ++ GI PNV+TY L+ G C+ R DA +L+ +M K +P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
+ ++Y ++ + F G++ EAKEL +M +M PD+
Sbjct: 259 NVITYSALL-----------------------DAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
VTY++++NG C +D+A +M M GC + VSY +NG C + + ++
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
+ N +TY+ ++ G + G + +A + +M G P N+L+ LC G+
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 460 MDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTT 519
++ A ++ + +++V +T++IRG C+ G +EEA SL + L PD VTYTT
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 520 IIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
++ L G + E L KM +GL+ T G + +L++KMLS
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLS 525
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 203/439 (46%), Gaps = 14/439 (3%)
Query: 261 RIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV-----ND----- 310
++ DAI L +M P V + ++ + K K+ V L +KM ND
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 311 --SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
N F ++ A ++ +M ++G PD VT ++VNGFCR + A ++ +M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
G KP+ V+Y A ++ LC + +A + E + PN +TY+ +++GL + S+A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
++ +M+KK P + + L+ + + GK+ AK+ +E + ++V ++SLI G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPT 548
C ++EA + D M D V+Y T+I+ K RVE+ +L +M +GLV
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 549 VVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILG 606
VTY T+I + Q G V+ + +M YN ++ LC G LE+A I
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 607 KVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEG 666
+ + D T ++ G A+ + C + + L PD+ + L +G
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 667 KSEEADTLMLRFVERGHIQ 685
E + L + + G ++
Sbjct: 485 LLHEVEALYTKMKQEGLMK 503
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 156/324 (48%), Gaps = 27/324 (8%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRN 194
Y+ D + Y +++ L KTK A + + R+GI RP +Y L+ + + +
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI--RPNVVTYTALVNGLCNSSRWSD 243
Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
A +LS M K + PN++ + + V K+ +A E M I P+++TY+ LI
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
G C RI +A ++ D M KGC D VSY T++ CK K
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK------------------- 344
Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
R+E+ +L +MSQ G + + VTY ++ GF + G++D+A++ QM G P+
Sbjct: 345 ----RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
+Y L GLC NG+ +A + ++ + +TY+ V+ G+ + GK+ EA +
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 435 MVKKGFFPTPVEINLLIQSLCREG 458
+ KG P V ++ LC +G
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 124/264 (46%), Gaps = 2/264 (0%)
Query: 421 REGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVV 480
R+ KL++A D+ +MVK FP+ V+ N L+ ++ + K D ++ G ++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 481 NFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKM 540
F +I FC + ALS+L M +PD VT ++++ + RV +A L+ KM
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 541 LSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYL 598
+ G P +V Y +I C+ RV D +++ K + Y ++ LC+
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 599 EEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKV 658
+A ++L +++ + T L+++++ G L A ++ M ++ PD+ +
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 659 SERLILEGKSEEADTLMLRFVERG 682
L L + +EA+ + V +G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKG 325
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 163/685 (23%), Positives = 281/685 (41%), Gaps = 89/685 (12%)
Query: 78 VREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRY 137
V ++C ++E W P E L L +P + VLR D A+++F W +R+
Sbjct: 36 VNDICNVLE-TGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTEL 94
Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
H P Y +L ++++ + ++L M+ G +++ +A KLR
Sbjct: 95 PHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYD 154
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
V+ MM+K P T I N L ++MQ G P V + LI+G+
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214
Query: 258 DLHRIKDAIKLIDEMP-----------------------------------LKGCSPDKV 282
R+ A+ L+DEM G PD+V
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 283 SYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQM 330
+Y +++G LCK R+ E ++ E + + + + G+ +EA L+ +
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 331 SQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKS 390
G IP V+ Y ++ ++G++D+A K+ ++M PN +Y ++ LC GK
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKL 393
Query: 391 LEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLL 450
A E+ ++ ++ PN T ++++ L + KL EAC + EM K P + L
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 451 IQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMY--LC 508
I L + G++D A K ++ L+ C N + +TSLI+ F G E+ + DM C
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 509 KKD---------------------------------PDTVTYTTIIDALSKNGRVEEATE 535
D PD +Y+ +I L K G E E
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 536 LMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLC 593
L M +G V Y VI +C+ G+V +LLE+M +K + Y VI+ L
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 594 SFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLK 653
L+EA + + + + L++ + G AY + + + L P+L
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 654 LCKKVSERLILEGKSEEADTLMLRF 678
+ + L+ K+EE + ++ F
Sbjct: 694 TWNSLLDALV---KAEEINEALVCF 715
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 234/493 (47%), Gaps = 17/493 (3%)
Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
A++ ++ + GK+ A+ V M+K A APNL N I +L KL A + M
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSM 403
Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
Q AG+ PNV T N ++ C ++ +A + +EM K C+PD++++ +++ L K R+
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463
Query: 298 KEVRDLMEKMVNDSNL-------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
+ + EKM+ DS+ F + GR E+ ++ M C PD+
Sbjct: 464 DDAYKVYEKML-DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 345 VVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEW 404
++ + GE ++ + M +++ P+ SY+ ++GL G + E E+ + +E+
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 405 WTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAK 464
+ Y++V+ G + GK+++A ++ EM KGF PT V +I L + ++D A
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 465 KFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDAL 524
+E +K +NVV ++SLI GF + G ++EA +L+++ P+ T+ +++DAL
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Query: 525 SKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCR 582
K + EA M P VTY +I+ C+V + ++M + +
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762
Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
+Y +I L G + EAG + + D++ + ++E N + A+ +
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822
Query: 643 MFNRNLIPDLKLC 655
R L K C
Sbjct: 823 TRRRGLPIHNKTC 835
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 223/529 (42%), Gaps = 63/529 (11%)
Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVL 199
I Y +L L K A +V M + + P +Y L+ RAGKL A +
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMKK---DAAPNLSTYNILIDMLCRAGKLDTAFELR 400
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
MQKA + PN+ N + L KL +A E M TP+ +T+ LI G +
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKV 460
Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS-------- 311
R+ DA K+ ++M C + + Y +++ R ++ + + M+N +
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 312 NLFHD---------------------------------------QGRIEEAKELVNQMSQ 332
N + D G E EL M +
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 333 MGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLE 392
GC+ D Y V++GFC+ G++++A ++L++M G +P V+Y + ++GL + E
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 393 AREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQ 452
A + ++ + N + YS ++ G + G++ EA ++ E+++KG P N L+
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 453 SLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDP 512
+L + +++ A Q C N V + LI G C+ +A +M P
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
T++YTT+I L+K G + EA L + + G VP Y +I R D L
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Query: 573 EKM------LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
E+ + + C + + +N C LE+A I+G VLR KA
Sbjct: 821 EETRRRGLPIHNKTCVVLLDTLHKNDC----LEQAA-IVGAVLRETGKA 864
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 124/292 (42%), Gaps = 23/292 (7%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
D Y ++++ K A ++L M +G E + ++ ++ +L A +
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
+ + N++I ++ I ++ +A LE + G+TPN+ T+N L+
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
I +A+ M C+P++V+Y ++ LCK ++ N + +F
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF-----------NKAFVFW---- 750
Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
+M + G P ++YT +++G + G + +A + + +G P++ Y A
Sbjct: 751 --------QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
+ GL + ++++A + + + T V++ L + L +A V
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIV 854
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 223/468 (47%), Gaps = 26/468 (5%)
Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
M GI +S + + R +L A+ +L M K P+++ N+ ++ GN+
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160
Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
+++A+ +++M G P+ +T+ L+ G ++ +A+ L++ M +KGC PD V+Y
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 287 VMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVV 346
V+ LCK +L+ KM ++G+IE DVV Y ++
Sbjct: 221 VINGLCKRGEPDLALNLLNKM--------EKGKIE---------------ADVVIYNTII 257
Query: 347 NGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWT 406
+G C+ +D A + +M G KP+ +Y ++ LC+ G+ +A +++ E+
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 407 PNAITYSVVMHGLRREGKLSEACDVVREMVK-KGFFPTPVEINLLIQSLCREGKMDGAKK 465
P+ + ++ ++ +EGKL EA + EMVK K FP V N LI+ C+ +++ +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
+E +G N V +T+LI GF Q D + A + M PD +TY ++D L
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
NG VE A + M + + +VTY T+I C+ G+VED L + K +
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
Y ++ C G EEA + ++ ++ T + L+ + L G
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 242/512 (47%), Gaps = 29/512 (5%)
Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
KL +A+ + M K+ P+++ + + + NK + E+MQ GI+ N+ TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
I +C ++ A+ ++ +M G P V+ +++ C RI
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI------------- 161
Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
EA LV+QM +MG PD VT+T +V+G + + +A ++++M GC
Sbjct: 162 ----------SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 211
Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
+P+ V+Y A +NGLC G+ A ++N E+ + + Y+ ++ GL + + +A D
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
+ +M KG P N LI LC G+ A + + + L K ++V F +LI F
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 491 QKGDLEEALSLLDDMYLCKK-DPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTV 549
++G L EA L D+M K PD V Y T+I K RVEE E+ +M +GLV
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Query: 550 VTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGK 607
VTY T+IH + Q ++ + ++M+S YN +++ LC+ G +E A +
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEY 451
Query: 608 VLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGK 667
+ + K D T ++E+ G + + C + + + P++ + +G
Sbjct: 452 MQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 511
Query: 668 SEEADTLMLRFVERGHIQPKSEEH--LQRQRV 697
EEAD L + E G + P S + L R R+
Sbjct: 512 KEEADALFVEMKEDGPL-PNSGTYNTLIRARL 542
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 208/452 (46%), Gaps = 13/452 (2%)
Query: 139 HDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYV 198
H+ Y + + + A +L M + G + L+ + ++ A+ +
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 199 LSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
+ M + P+ + T +H L NK ++A+ +ERM + G P+++TY +I G C
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS---NLFH 315
A+ L+++M D V Y T++ LCK K + + DL KM ++F
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 316 ---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
+ GR +A L++ M + PD+V + A+++ F + G+L +A+K+ +M
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 367 HHG-CKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
C P+ V+Y + G C + E E+ + N +TY+ ++HG +
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 426 SEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSL 485
A V ++MV G P + N+L+ LC G ++ A + + +++V +T++
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 486 IRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGL 545
I C+ G +E+ L + L P+ VTYTT++ + G EEA L ++M G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 546 VPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLS 577
+P TY T+I + G +L+++M S
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 200/424 (47%), Gaps = 28/424 (6%)
Query: 137 YRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMV--AYSRAGKLRN 194
Y+ D + + ++ L + A ++ M +G C+P+ +Y V + G+
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG--CQPDLVTYGAVINGLCKRGEPDL 233
Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
A+ +L+ M+K + +++I NT I L + A +M+ GI P+V TYN LI
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLF 314
C+ R DA +L+ +M K +PD V + ++ KE ++ E L ++MV +
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH-- 351
Query: 315 HDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNT 374
C PDVV Y ++ GFC+ +++ ++ ++M G NT
Sbjct: 352 --------------------CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Query: 375 VSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVRE 434
V+YT ++G A+ + + P+ +TY++++ GL G + A V
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEY 451
Query: 435 MVKKGFFPTPVEINLLIQSLCREGKM-DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
M K+ V +I++LC+ GK+ DG F L KG NVV +T+++ GFC+KG
Sbjct: 452 MQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL-KGVKPNVVTYTTMMSGFCRKG 510
Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
EEA +L +M P++ TY T+I A ++G + EL+ +M S G T+
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570
Query: 554 TVIH 557
V +
Sbjct: 571 LVTN 574
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 3/204 (1%)
Query: 484 SLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSK 543
+L R Q L++A+ L DM + P V ++ ++ A++K + + L +M +
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104
Query: 544 GLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEA 601
G+ + TY I+ +C+ ++ L +L KM L N ++ C + EA
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 602 GKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSER 661
++ +++ + D T LV A + RM + PDL V
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 662 LILEGKSEEADTLMLRFVERGHIQ 685
L G+ + A L+ + +E+G I+
Sbjct: 225 LCKRGEPDLALNLLNK-MEKGKIE 247
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/497 (25%), Positives = 237/497 (47%), Gaps = 28/497 (5%)
Query: 191 KLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYN 250
+ A+ + + M ++ P+++ ++V+ K + + +Q+ G++ ++ T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 251 CLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND 310
L+ +C + A + +M G PD V++ +++ C R+
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM------------- 158
Query: 311 SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
EEA +VNQM +MG PDVV YT +++ C+ G ++ A + QM ++G
Sbjct: 159 ----------EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGI 208
Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
+P+ V YT+ +NGLC++G+ +A ++ + P+ IT++ ++ +EGK +A +
Sbjct: 209 RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEE 268
Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
+ EM++ P LI C EG +D A++ KGC +VV +TSLI GFC
Sbjct: 269 LYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFC 328
Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVV 550
+ +++A+ + +M +T+TYTT+I + G+ A E+ M+S+G+ P +
Sbjct: 329 KCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIR 388
Query: 551 TYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTA-----YNQVIENLCSFGYLEEAGKIL 605
TY ++H C G+V+ L + E M ++ A YN ++ LC G LE+A +
Sbjct: 389 TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Query: 606 GKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILE 665
+ + T ++++ G A + C + ++ + P++ + L E
Sbjct: 449 EDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508
Query: 666 GKSEEADTLMLRFVERG 682
G EA L + E G
Sbjct: 509 GLKHEAHVLFRKMKEDG 525
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 207/419 (49%), Gaps = 26/419 (6%)
Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
A L M + G E F+ L+ + ++ AM +++ M + + P++++ T I
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
L + AL ++M+ GI P+V+ Y L+ G C+ R +DA L+ M + P
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDV 339
D +++ ++ KE G+ +A+EL N+M +M P++
Sbjct: 246 DVITFNALIDAFVKE-----------------------GKFLDAEELYNEMIRMSIAPNI 282
Query: 340 VTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINT 399
TYT+++NGFC G +D+A++M M GC P+ V+YT+ +NG C K +A ++
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 400 SEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGK 459
++ T N ITY+ ++ G + GK + A +V MV +G P N+L+ LC GK
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 460 MDGAKKFMQECLNK---GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVT 516
+ A ++ + G A N+ + L+ G C G LE+AL + +DM + D +T
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 517 YTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
YT II + K G+V+ A L + SKG+ P VVTY T+I + G + L KM
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 213/470 (45%), Gaps = 32/470 (6%)
Query: 172 IECRPEA----FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKL 227
+E RP F+ L+ ++ K + + +Q V+ +L CN ++ ++
Sbjct: 64 VESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQP 123
Query: 228 AKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTV 287
A FL +M G P+++T+ LI G+C +R+++A+ ++++M G PD V Y T+
Sbjct: 124 YLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTI 183
Query: 288 MGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVN 347
+ LCK G + A L +QM G PDVV YT++VN
Sbjct: 184 IDSLCK-----------------------NGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 348 GFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTP 407
G C G A +L+ M KP+ +++ A ++ GK L+A E+ N P
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 408 NAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
N TY+ +++G EG + EA + M KG FP V LI C+ K+D A K
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
E KG N + +T+LI+GF Q G A + M P+ TY ++ L N
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 528 GRVEEAT---ELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCR 582
G+V++A E M K G+ P + TY ++H C G++E L + E M ++
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGI 460
Query: 583 TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
Y +I+ +C G ++ A + + K + T ++ +G+
Sbjct: 461 ITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGL 510
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 175/373 (46%), Gaps = 30/373 (8%)
Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNA 195
+ D ++Y +++ L K A + M GI RP+ Y L+ +G+ R+A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGI--RPDVVMYTSLVNGLCNSGRWRDA 231
Query: 196 MYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKG 255
+L M K + P+++ N I V K A M I PN+ TY LI G
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 256 YCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFH 315
+C + +A ++ M KGC PD V+Y +++ CK K
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCK-------------------- 331
Query: 316 DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTV 375
++++A ++ +MSQ G + +TYT ++ GF +VG+ + A+++ M G PN
Sbjct: 332 ---KVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIR 388
Query: 376 SYTAFLNGLCHNG---KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVV 432
+Y L+ LC+NG K+L E + E + PN TY+V++HGL GKL +A V
Sbjct: 389 TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Query: 433 REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQK 492
+M K+ + ++IQ +C+ GK+ A +KG NVV +T++I G ++
Sbjct: 449 EDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508
Query: 493 GDLEEALSLLDDM 505
G EA L M
Sbjct: 509 GLKHEAHVLFRKM 521
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 132/274 (48%), Gaps = 5/274 (1%)
Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
NGL H+ + EA ++ E P+ I ++ +++ + + K ++ + G
Sbjct: 46 NGL-HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVS 104
Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
NLL+ C+ + A F+ + + G ++V FTSLI GFC +EEA+S+
Sbjct: 105 HDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSM 164
Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
++ M PD V YTTIID+L KNG V A L +M + G+ P VV Y ++++ C
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224
Query: 562 VGRVEDLLKLLEKMLSKQKCR---TAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAS 618
GR D LL M +K+K + +N +I+ G +A ++ +++R + +
Sbjct: 225 SGRWRDADSLLRGM-TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF 283
Query: 619 TCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDL 652
T L+ + +G A ++ M + PD+
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 129/288 (44%), Gaps = 5/288 (1%)
Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPV 445
++GK+L +++ S +W Y ++ + +EA D+ MV+ P+ +
Sbjct: 17 NSGKALSFSRLLDLS---FWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSII 73
Query: 446 EINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM 505
+ L+ + + K D G + ++ L+ FCQ A S L M
Sbjct: 74 DFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM 133
Query: 506 YLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRV 565
+PD VT+T++I+ R+EEA ++ +M+ G+ P VV Y T+I C+ G V
Sbjct: 134 MKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV 193
Query: 566 EDLLKLLEKM--LSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVL 623
L L ++M + Y ++ LC+ G +A +L + + K D T + L
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Query: 624 VESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
+++++ +G L A ++ M ++ P++ + +EG +EA
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 146/342 (42%), Gaps = 57/342 (16%)
Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLR 193
+ R D ++Y ++ L + + A +LR M +R I+ F+ L+ A+ + GK
Sbjct: 205 NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264
Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIH-------------------------------VLV 222
+A + + M + ++APN+ + I+ L+
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 223 VG----NKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCS 278
G K+ A++ M G+T N +TY LI+G+ + + A ++ M +G
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 279 PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQM-GCIP 337
P+ +Y ++ LC ++K+ + E M Q +M G P
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDM---------------------QKREMDGVAP 423
Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
++ TY +++G C G+L++A + + M ++YT + G+C GK A +
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
+ + PN +TY+ ++ GL REG EA + R+M + G
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 234/489 (47%), Gaps = 37/489 (7%)
Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
I++ +++ + ++ A LM +G + E ++++ SR ++ NA +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
M + + N+ N I+VL KL KA FL M++ GI P ++TYN L++G+ R
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
I+ A +I EM KG PD +Y ++ ++C E R
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR------------------------- 310
Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
A E++ +M ++G +PD V+Y ++ G G+L+ A +M G P +Y +
Sbjct: 311 -ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLI 369
Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
+GL K A +I E+ +++TY+++++G + G +A + EM+ G
Sbjct: 370 HGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQ 429
Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
PT LI LCR+ K A + ++ + KG ++V +L+ G C G+++ A SL
Sbjct: 430 PTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSL 489
Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
L +M + +PD VTY ++ L G+ EEA ELM +M +G+ P ++Y T+I Y +
Sbjct: 490 LKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 549
Query: 562 VGRVEDLLKLLEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKA---- 615
G + + ++MLS T YN +++ L + G++ ++LR
Sbjct: 550 KGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSK----NQEGELAEELLREMKSEGIVP 605
Query: 616 -DASTCHVL 623
D+S C V+
Sbjct: 606 NDSSFCSVI 614
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 223/453 (49%), Gaps = 29/453 (6%)
Query: 243 TPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRD 302
T + + ++ L++ C L + +AI+ M KG P + ++ L + RI+
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211
Query: 303 L---MEKMVNDSNLFH---------DQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
M +M SN++ +G++++AK + M G P +VTY +V GF
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
G ++ A+ ++ +M G +P+ +Y L+ +C+ G+ A E++ +E P+++
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSV 328
Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
+Y++++ G G L A EMVK+G PT N LI L E K++ A+ ++E
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 388
Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
KG ++ V + LI G+CQ GD ++A +L D+M P TYT++I L + +
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT 448
Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM--LSKQKCRTAYNQV 588
EA EL K++ KG+ P +V T++ +C +G ++ LL++M +S YN +
Sbjct: 449 READELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCL 508
Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM----F 644
+ LC G EEA +++G++ R K D + + L+ Y KG A+ V M F
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568
Query: 645 NRNLIPDLKLCKKVS--------ERLILEGKSE 669
N L+ L K +S E L+ E KSE
Sbjct: 569 NPTLLTYNALLKGLSKNQEGELAEELLREMKSE 601
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 5/293 (1%)
Query: 392 EAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLI 451
EA E +E+ + P T + ++ L R ++ A +M + N++I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 452 QSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKD 511
LC+EGK+ AK F+ G +V + +L++GF +G +E A ++ +M
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Query: 512 PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL 571
PD TY I+ + GR A+E++ +M GLVP V+Y +I G +E
Sbjct: 293 PDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 572 LEKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
++M+ + T YN +I L +E A ++ ++ D+ T ++L+ Y
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 630 KGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
G A+ + M + P + L + K+ EAD L + V +G
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMY 197
D + Y ++ L + A+ ++ M RRGI +P+ SY L+ YS+ G ++A
Sbjct: 501 DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI--KPDHISYNTLISGYSKKGDTKHAFM 558
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
V M P LL N + L + A L M+ GI PN ++ +I+
Sbjct: 559 VRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618
Query: 258 DL 259
+L
Sbjct: 619 NL 620
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 234/486 (48%), Gaps = 14/486 (2%)
Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
M RG+E +S L+ +RA ++ +A +VL M K PN+++ N I +
Sbjct: 334 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393
Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
L KA+ + M G++ TYN LIKGYC + +A +L+ EM G + ++ S+ +
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 287 VMGYLCK----EKRIKEVRD-LMEKMVNDSNLFHD-------QGRIEEAKELVNQMSQMG 334
V+ LC + ++ V + L+ M L G+ +A EL Q G
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
+ D T A+++G C G+LD+A ++ +++ GC + VSY ++G C K EA
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
++ + P+ TYS+++ GL K+ EA + + G P +++I
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633
Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
C+ + + ++F E ++K N V + LIR +C+ G L AL L +DM P++
Sbjct: 634 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 693
Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
TYT++I +S RVEEA L +M +GL P V Y +I Y ++G++ + LL +
Sbjct: 694 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 753
Query: 575 MLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGI 632
M SK + Y +I G + EA ++L ++ D+ T + YL +G
Sbjct: 754 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 813
Query: 633 PLLAYK 638
L A+K
Sbjct: 814 VLEAFK 819
Score = 192 bits (489), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 210/434 (48%), Gaps = 25/434 (5%)
Query: 170 RGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAK 229
+G+ F+ + A+ + GK+ A+ + S M++A VAPN++ NT I L + + +
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326
Query: 230 ALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMG 289
A F E+M G+ P ++TY+ L+KG RI DA ++ EM KG P+ + Y ++
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI- 385
Query: 290 YLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
DS F + G + +A E+ + M G TY ++ G+
Sbjct: 386 --------------------DS--FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 423
Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
C+ G+ D A+++L++M G N S+T+ + LC + A + +P
Sbjct: 424 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 483
Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
+ ++ GL + GK S+A ++ + + KGF N L+ LC GK+D A + +E
Sbjct: 484 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 543
Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
L +GC ++ V++ +LI G C K L+EA LD+M PD TY+ +I L +
Sbjct: 544 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 603
Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQ 587
VEEA + G++P V TY +I C+ R E+ + ++M+SK Q YN
Sbjct: 604 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 663
Query: 588 VIENLCSFGYLEEA 601
+I C G L A
Sbjct: 664 LIRAYCRSGRLSMA 677
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 134/538 (24%), Positives = 239/538 (44%), Gaps = 39/538 (7%)
Query: 98 ELRNLLRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLC 157
+L +L L+ ++ RS+ + + AL FF A + + Y +++ +L L
Sbjct: 96 QLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLL 155
Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAV---APNLLIC 214
A+ VL + + P VA + +AM LS+ + +LLI
Sbjct: 156 SAARVVLIRLINGNVPVLPCGLRDSRVA------IADAMASLSLCFDEEIRRKMSDLLIE 209
Query: 215 NTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPL 274
G LA L + G+ P+ T N L+ + + + D +
Sbjct: 210 VYCTQFKRDGCYLA--LDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVC 266
Query: 275 KGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMG 334
KG SPD + T + CK G++EEA +L ++M + G
Sbjct: 267 KGVSPDVYLFTTAINAFCK-----------------------GGKVEEAVKLFSKMEEAG 303
Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
P+VVT+ V++G G D+A ++M G +P ++Y+ + GL + +A
Sbjct: 304 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 363
Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
++ ++ + PN I Y+ ++ G L++A ++ MV KG T N LI+
Sbjct: 364 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 423
Query: 455 CREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDT 514
C+ G+ D A++ ++E L+ G VN +FTS+I C + AL + +M L P
Sbjct: 424 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 483
Query: 515 VTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEK 574
TT+I L K+G+ +A EL + L+KG V T ++H C+ G++++ ++ ++
Sbjct: 484 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 543
Query: 575 MLSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
+L + C R +YN +I C L+EA L ++++ K D T +L+ N
Sbjct: 544 ILGR-GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 600
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 128/299 (42%), Gaps = 48/299 (16%)
Query: 428 ACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQEC-----LNKGCAVNVVNF 482
A DV + KG FP+ N+L+ SL R A +F + C + KG + +V F
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVR------ANEFQKCCEAFDVVCKGVSPDVYLF 276
Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
T+ I FC+ G +EEA+ L M P+ VT+ T+ID L GR +EA KM+
Sbjct: 277 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 336
Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEE 600
+G+ PT++TY ++ + R+ D +L++M K YN +I++ G L +
Sbjct: 337 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 396
Query: 601 AGKILGKVLRTASKADASTCHVLVESYLNKG---------------------------IP 633
A +I ++ +ST + L++ Y G I
Sbjct: 397 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 456
Query: 634 LL--------AYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHI 684
LL A + M RN+ P L + L GK +A L +F+ +G +
Sbjct: 457 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 515
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 104 RSLKPRQ------ICAVLRSQADERVALQFFYWAD-RQWRYRHDPIVYYMMLEILSKTKL 156
R LKP IC + E A+QF W D ++ D Y +M++ K +
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEE-AIQF--WDDCKRNGMLPDVYTYSVMIDGCCKAER 638
Query: 157 CQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNT 216
+ + M + ++ +++L+ AY R+G+L A+ + M+ ++PN +
Sbjct: 639 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 698
Query: 217 AIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKG 276
I + + +++ +A E M++ G+ PNV Y LI GY L ++ L+ EM K
Sbjct: 699 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 758
Query: 277 CSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCI 336
P+K++Y ++G ++ G + EA L+N+M + G +
Sbjct: 759 VHPNKITYTVMIGGYARD-----------------------GNVTEASRLLNEMREKGIV 795
Query: 337 PDVVTYTAVVNGFCRVGELDQAKK 360
PD +TY + G+ + G + +A K
Sbjct: 796 PDSITYKEFIYGYLKQGGVLEAFK 819
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 195 bits (496), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 137/550 (24%), Positives = 250/550 (45%), Gaps = 46/550 (8%)
Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
+R A+ LS ++K++ P+ CN IH L+ N +L+FL + G TP+ ++N
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM---- 307
++ C L ++K A ++ MP GC PD +SY +++ C+ I+ ++E +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 308 --------VNDSNLFHDQGRIEEAKELVNQMSQM--GCIPDVVTYTAVVNGFCRVGELDQ 357
V+ ++LF+ +++ E+ M M C P+VVTY+ ++ FC+ GEL
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181
Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
A K M PN V++T ++G C G A + + N +TY+ ++
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
G ++G++ A ++ MV+ P + +I + G D A KF+ + LN+G +
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRL 301
Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELM 537
++ + +I G C G L+EA +++DM PD V +TT+++A K+GR++ A +
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 538 MKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKL-------------------------- 571
K++ +G P VV T+I + G++ + +
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIE 421
Query: 572 LEKMLSKQK------CRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVE 625
+E++ SK + Y I LC G L +A K+ ++++ D L+
Sbjct: 422 VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIY 481
Query: 626 SYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQ 685
+KG+ + A +V M N + PD + + EG A L+L RG +
Sbjct: 482 GLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVT 541
Query: 686 PKSEEHLQRQ 695
S+ +Q
Sbjct: 542 AVSDADCSKQ 551
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 217/441 (49%), Gaps = 32/441 (7%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLR-LMARRGIECRPE--AFSYLMVAYSRAGKLRNAM 196
D I Y +++ + + A VL L A G C+P+ +F+ L +S+ L
Sbjct: 90 DVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF 149
Query: 197 YVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGY 256
+ +M K +PN++ +T I +L AL+ M+ ++PNV+T+ CLI GY
Sbjct: 150 VYMGVMLKCC-SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGY 208
Query: 257 CDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
C ++ A+ L EM S + V+Y ++ CK+ ++ ++ +MV D
Sbjct: 209 CKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED------ 262
Query: 317 QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVS 376
R+E P+ + YT +++GF + G+ D A K L +M + G + + +
Sbjct: 263 --RVE---------------PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITA 305
Query: 377 YTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMV 436
Y ++GLC NGK EA E++ E+ P+ + ++ +M+ + G++ A ++ +++
Sbjct: 306 YGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLI 365
Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
++GF P V ++ +I + + G++ A + C+ K N V +T LI C++GD
Sbjct: 366 ERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKA---NDVMYTVLIDALCKEGDFI 420
Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
E L + PD YT+ I L K G + +A +L +M+ +GL+ ++ Y T+I
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 557 HRYCQVGRVEDLLKLLEKMLS 577
+ G + + ++ ++ML+
Sbjct: 481 YGLASKGLMVEARQVFDEMLN 501
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 154/331 (46%), Gaps = 12/331 (3%)
Query: 119 ADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEA 178
D VA+ Y R+ R + + Y +++ K Q A+ + M +E
Sbjct: 212 GDLEVAVSL-YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLV 270
Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
++ ++ + + G NAM L+ M + ++ I L KL +A +E M+
Sbjct: 271 YTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDME 330
Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
+ + P+++ + ++ Y R+K A+ + ++ +G PD V+ T++ + K ++
Sbjct: 331 KSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLH 390
Query: 299 E---------VRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
E D+M ++ D+ +G E + L +++S+ G +PD YT+ + G
Sbjct: 391 EAIVYFCIEKANDVMYTVLIDA--LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGL 448
Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
C+ G L A K+ +M G + ++YT + GL G +EAR++ + +P++
Sbjct: 449 CKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDS 508
Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGF 440
+ +++ +EG ++ A D++ +M ++G
Sbjct: 509 AVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/546 (25%), Positives = 252/546 (46%), Gaps = 27/546 (4%)
Query: 144 YYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQ 203
Y +++ L + + + A LR + I +F+ +M Y + G + A +
Sbjct: 232 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 291
Query: 204 KAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIK 263
K + P++ N I+ L + +A+AL M G+ P+ +TYN L KG+ L I
Sbjct: 292 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 351
Query: 264 DAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD------- 316
A ++I +M KG SPD ++Y ++ C+ I L++ M++ +
Sbjct: 352 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 411
Query: 317 ------QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGC 370
GRI+EA L NQM G PD+V Y+ V++G C++G+ D A + +M
Sbjct: 412 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 471
Query: 371 KPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACD 430
PN+ ++ A L GLC G LEAR ++++ T + + Y++V+ G + G + EA +
Sbjct: 472 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 531
Query: 431 VVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFC 490
+ + +++ G P+ N LI C+ + A+K + G A +VV++T+L+ +
Sbjct: 532 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 591
Query: 491 QKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMK----------- 539
G+ + L +M P VTY+ I L + + E ++ +
Sbjct: 592 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 651
Query: 540 -MLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQVIENLCSFG 596
M S+G+ P +TY T+I C+V + LE M S+ YN +I++LC +G
Sbjct: 652 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 711
Query: 597 YLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCK 656
Y+ +A + + L++++ KG P +A K+ ++ +R ++
Sbjct: 712 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 771
Query: 657 KVSERL 662
V RL
Sbjct: 772 AVINRL 777
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 206/448 (45%), Gaps = 27/448 (6%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
D + Y ++ + + GA V+R M +G+ ++ L+ + G + + +L
Sbjct: 333 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL 392
Query: 200 SMMQKAAVAPNLLI-CNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCD 258
M N +I C+ + L ++ +AL +M+ G++P+++ Y+ +I G C
Sbjct: 393 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 452
Query: 259 LHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------- 311
L + A+ L DEM K P+ ++ ++ LC++ + E R L++ +++
Sbjct: 453 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 512
Query: 312 -NLFHD----QGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMY 366
N+ D G IEEA EL + + G P V T+ +++ G+C+ + +A+K+L +
Sbjct: 513 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 572
Query: 367 HHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
+G P+ VSYT ++ + G + E+ + E P +TYSV+ GL R K
Sbjct: 573 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK-H 631
Query: 427 EACDVV-------------REMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNK 473
E C+ V R+M +G P + N +IQ LCR + GA F++ ++
Sbjct: 632 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 691
Query: 474 GCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEA 533
+ + LI C G + +A S + + YTT+I A G E A
Sbjct: 692 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 751
Query: 534 TELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
+L ++L +G ++ Y VI+R C+
Sbjct: 752 VKLFHQLLHRGFNVSIRDYSAVINRLCR 779
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 227/497 (45%), Gaps = 34/497 (6%)
Query: 103 LRSLKPRQICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR 162
LR + +I L S++ + +++ FF + +RH ++ +L+ + + +
Sbjct: 81 LRHVHVEEIMDELMSESSD-LSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQV 139
Query: 163 VL-RLMARRGIECRPEAFSY------------LMVAYSRAGKLRNAMYVLSMMQKAAVAP 209
+L +L+ G C + S+ L+ SR + +++Y+L M+ +
Sbjct: 140 ILEQLLQEEGTLCELLSNSFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNV 199
Query: 210 NLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLI 269
+ N+ ++ +K+ + ++ N TY+ ++ G C +++DA+ +
Sbjct: 200 STQSYNSVLYHFRETDKMWDVYKEIK-------DKNEHTYSTVVDGLCRQQKLEDAVLFL 252
Query: 270 DEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDL--------MEKMVNDSNLFHDQ---- 317
K P VS+ ++M CK + + + V N+ +
Sbjct: 253 RTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLV 312
Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
G I EA EL + M++ G PD VTY + GF +G + A ++++ M G P+ ++Y
Sbjct: 313 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 372
Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITY-SVVMHGLRREGKLSEACDVVREMV 436
T L G C G ++ + N+I SV++ GL + G++ EA + +M
Sbjct: 373 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 432
Query: 437 KKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLE 496
G P V +++I LC+ GK D A E +K N +L+ G CQKG L
Sbjct: 433 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 492
Query: 497 EALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVI 556
EA SLLD + + D V Y +ID +K+G +EEA EL ++ G+ P+V T+ ++I
Sbjct: 493 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 552
Query: 557 HRYCQVGRVEDLLKLLE 573
+ YC+ + + K+L+
Sbjct: 553 YGYCKTQNIAEARKILD 569
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 173/390 (44%), Gaps = 33/390 (8%)
Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRI-EEAKELVNQMSQMGCIPDVVTYTAVVNGF 349
L ++R KE++ ++E+ L ++G + E + G + D++ + +
Sbjct: 128 LAGQRRFKELQVILEQ------LLQEEGTLCELLSNSFRKWESTGLVWDMLLFLS----- 176
Query: 350 CRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNA 409
R+ +D + +L++M +T SY + L K + + I E
Sbjct: 177 SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH------ 230
Query: 410 ITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQE 469
TYS V+ GL R+ KL +A +R K P+ V N ++ C+ G +D AK F
Sbjct: 231 -TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 289
Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
L G +V + LI G C G + EAL L DM +PD+VTY + G
Sbjct: 290 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 349
Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ---KCRTAYN 586
+ A E++ ML KGL P V+TY ++ CQ+G ++ L LL+ MLS+ +
Sbjct: 350 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 409
Query: 587 QVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNR 646
++ LC G ++EA + ++ D +++ G +A + M ++
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469
Query: 647 NLIPD--------LKLCKKVSERLILEGKS 668
++P+ L LC+K ++LE +S
Sbjct: 470 RILPNSRTHGALLLGLCQK---GMLLEARS 496
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 138/319 (43%), Gaps = 24/319 (7%)
Query: 182 LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAG 241
L++ + G L A +L + + ++++ N I + +AL + + G
Sbjct: 481 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 540
Query: 242 ITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVR 301
ITP+V T+N LI GYC I +A K++D + L G +P VSY T+M K +
Sbjct: 541 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 600
Query: 302 DLMEKM---------VNDSNLFHDQGR---------------IEEAKELVNQMSQMGCIP 337
+L +M V S +F R E+ K+ + M G P
Sbjct: 601 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 660
Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMI 397
D +TY ++ CRV L A L+ M ++ +Y ++ LC G +A I
Sbjct: 661 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 720
Query: 398 NTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCRE 457
+ +E+ + + Y+ ++ +G A + +++ +GF + + + +I LCR
Sbjct: 721 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 780
Query: 458 GKMDGAKKFMQECLNKGCA 476
++ +K F L++G +
Sbjct: 781 HLVNESKFFFCLMLSQGIS 799
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 134/317 (42%), Gaps = 39/317 (12%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
D ++Y ++++ +K+ + A + +++ GI F+ L+ Y + + A +L
Sbjct: 509 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 568
Query: 200 SMMQKAAVAPNLLICNTAIHVLV-VGNKLAKALRFLER-MQLAGITPNVLTYNCLIKGYC 257
+++ +AP+++ T + GN K++ L R M+ GI P +TY+ + KG C
Sbjct: 569 DVIKLYGLAPSVVSYTTLMDAYANCGN--TKSIDELRREMKAEGIPPTNVTYSVIFKGLC 626
Query: 258 DL-------HRIKDAI-----KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
H +++ I + + +M +G PD+++Y T++ YLC+ K + +E
Sbjct: 627 RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 686
Query: 306 KMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQM 365
M + R +A TY +++ C G + +A + +
Sbjct: 687 IM---------KSRNLDASS--------------ATYNILIDSLCVYGYIRKADSFIYSL 723
Query: 366 YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKL 425
+ +YT + C G A ++ + + + YS V++ L R +
Sbjct: 724 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLV 783
Query: 426 SEACDVVREMVKKGFFP 442
+E+ M+ +G P
Sbjct: 784 NESKFFFCLMLSQGISP 800
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 4/189 (2%)
Query: 153 KTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLL 212
+ ++ + K+ LR M GI ++ ++ R L A L +M+ + +
Sbjct: 639 RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 698
Query: 213 ICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEM 272
N I L V + KA F+ +Q ++ + Y LIK +C + A+KL ++
Sbjct: 699 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 758
Query: 273 PLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE---EAKELVNQ 329
+G + Y V+ LC+ + E + M++ + D E ++ EL++
Sbjct: 759 LHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQ-GISPDLDICEVMIKSDELLSW 817
Query: 330 MSQMGCIPD 338
+ G +PD
Sbjct: 818 TIKWGLLPD 826
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/520 (25%), Positives = 243/520 (46%), Gaps = 29/520 (5%)
Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAA 206
+LEI + L + A+ V M+ RG+ ++ +++ R GK++ A L+ M +
Sbjct: 188 VLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRG 247
Query: 207 VAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAI 266
P+ C + L + +A+ + +M G PN++ + LI G C IK A
Sbjct: 248 FIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAF 307
Query: 267 KLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL------------- 313
++++EM G P+ ++ ++ LCK ++ L K+V
Sbjct: 308 EMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGG 367
Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
+ + ++ A+ L ++M + G P+V TYT ++NG C+ G +A +++ M G PN
Sbjct: 368 YCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPN 427
Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
+Y A ++ LC ++ EA E++N + + +TY++++ ++ +++A
Sbjct: 428 IYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFC 487
Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
M K GF N+LI + CR+ KM +++ Q ++ G +TS+I +C++G
Sbjct: 488 RMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 547
Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
D++ AL +M PD+ TY ++I L K V+EA +L M+ +GL P VT
Sbjct: 548 DIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRV 607
Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTAS 613
T+ + YC+ + + LLE + K RT ++ LCS + A K+L S
Sbjct: 608 TLAYEYCKRNDSANAMILLEPLDKKLWIRTV-RTLVRKLCSEKKVGVAALFFQKLLEKDS 666
Query: 614 KADASTCHVLVESYLNKGIPLLAYKVACRMFNR-NLIPDL 652
AD T L A+ AC + NL+ DL
Sbjct: 667 SADRVT--------------LAAFTTACSESGKNNLVTDL 692
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 148/585 (25%), Positives = 239/585 (40%), Gaps = 86/585 (14%)
Query: 111 ICAVLRSQADERVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARR 170
+ A L S++ VAL FFYWA ++RH +Y + + L Q A V+R M R
Sbjct: 97 VVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRN 156
Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
+S G+L A+ ++ MQ
Sbjct: 157 ---------------FSEIGRLNEAVGMVMDMQNQ------------------------- 176
Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
G+TP+ +T NC+++ +L I+ A + DEM ++G PD SY
Sbjct: 177 ----------GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY------ 220
Query: 291 LCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFC 350
K I RD G+I+EA + M Q G IPD T T ++ C
Sbjct: 221 --KLMVIGCFRD---------------GKIQEADRWLTGMIQRGFIPDNATCTLILTALC 263
Query: 351 RVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAI 410
G +++A ++M G KPN +++T+ ++GLC G +A EM+ W PN
Sbjct: 264 ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 323
Query: 411 TYSVVMHGLRREGKLSEACDVVREMVKKGFF-PTPVEINLLIQSLCREGKMDGAKKFMQE 469
T++ ++ GL + G +A + ++V+ + P +I C+E K++ A+
Sbjct: 324 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383
Query: 470 CLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGR 529
+G NV +T+LI G C+ G A L++ M P+ TY ID+L K R
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443
Query: 530 VEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY---- 585
EA EL+ K S GL VTY +I C+ + L +M +T +
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM-----NKTGFEADM 498
Query: 586 ---NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACR 642
N +I C ++E+ ++ V+ T ++ Y +G LA K
Sbjct: 499 RLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHN 558
Query: 643 MFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGHIQPK 687
M +PD + L + +EA L ++RG P+
Sbjct: 559 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 603
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
D + Y ++++ K A M + G E + L+ A+ R K++ + +
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
++ + P + I + AL++ M+ G P+ TY LI G C
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581
Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM 307
+ +A KL + M +G SP +V+ T+ CK L+E +
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL 629
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 144/515 (27%), Positives = 233/515 (45%), Gaps = 68/515 (13%)
Query: 178 AFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERM 237
A S L+ + GK+ A+ ++ + V+PNL + N I L G K +A +RM
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Query: 238 QLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRI 297
G+ PN +TY+ LI +C ++ A+ + EM G Y +++ CK I
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453
Query: 298 KEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQ 357
M +M+N ++E P VVTYT+++ G+C G++++
Sbjct: 454 SAAEGFMAEMINK--------KLE---------------PTVVTYTSLMGGYCSKGKINK 490
Query: 358 AKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMH 417
A ++ +M G P+ ++T L+GL G +A ++ N E PN +TY+V++
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 418 GLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAV 477
G EG +S+A + ++EM +KG P LI LC G+ AK F+ C +
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 478 NVVNFTSLIRGFCQKGDLEEALSLLDDMY------------------LCKKD-------- 511
N + +T L+ GFC++G LEEALS+ +M L KD
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 512 ---------PDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQV 562
PD V YT++IDA SK G +EA + M+++G VP VTY VI+ C+
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 563 GRVEDLLKLLEKMLSKQKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASK------AD 616
G V + L KM Q + NQV C L + + K + + A+
Sbjct: 731 GFVNEAEVLCSKM---QPVSSVPNQVTYG-CFLDILTKGEVDMQKAVELHNAILKGLLAN 786
Query: 617 ASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
+T ++L+ + +G A ++ RM + PD
Sbjct: 787 TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPD 821
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 148/575 (25%), Positives = 261/575 (45%), Gaps = 41/575 (7%)
Query: 60 REEIRRVVLEEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQA 119
+EE R + E+ +F V V R++ + +W L EL + R LK + +L
Sbjct: 30 QEECR--IAEDKQF----VDAVKRIVRGKRSWEIALSSELVS--RRLKTVHVEEILIGTI 81
Query: 120 DE-RVALQFFYWADRQWRYRHDPIVYYMMLEILSKTKLCQGAKR--------------VL 164
D+ ++ L+FF + + H + +++ L K L A V
Sbjct: 82 DDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVF 141
Query: 165 RLMARRGIECR---PEAFSYLMVAYSRAGKLRNAMYVLSMM-QKAAVAPNLLICNTAIHV 220
++ +C+ +F L+ Y R+ ++ + + V MM K ++ P + + +H
Sbjct: 142 NVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHG 201
Query: 221 LVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPD 280
LV A+ M GI P+V Y +I+ C+L + A ++I M GC +
Sbjct: 202 LVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVN 261
Query: 281 KVSYYTVMGYLCKEKRIKEV---------RDLMEKMVNDSNLFHDQGRIEEAKELVNQMS 331
V Y ++ LCK++++ E +DL +V L + +++E + + M
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 332 QMGCI---PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNG 388
+M C+ P +++V G + G++++A +++++ G PN Y A ++ LC
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 389 KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEIN 448
K EA + + + PN +TYS+++ R GKL A + EMV G + N
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 449 LLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLC 508
LI C+ G + A+ FM E +NK VV +TSL+ G+C KG + +AL L +M
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 509 KKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDL 568
P T+TT++ L + G + +A +L +M + P VTY +I YC+ G +
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 569 LKLLEKMLSKQKCRTAYN--QVIENLCSFGYLEEA 601
+ L++M K Y+ +I LC G EA
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 224/472 (47%), Gaps = 16/472 (3%)
Query: 195 AMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIK 254
AM + + M + P++ I I L L++A + M+ G N++ YN LI
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 255 GYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMV------ 308
G C ++ +A+ + ++ K PD V+Y T++ LCK + + ++M++M+
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 309 ---NDSNL---FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKML 362
S+L +G+IEEA LV ++ G P++ Y A+++ C+ + +A+ +
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 363 QQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRRE 422
+M G +PN V+Y+ ++ C GK A + + + Y+ +++G +
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 423 GKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNF 482
G +S A + EM+ K PT V L+ C +GK++ A + E KG A ++ F
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 483 TSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
T+L+ G + G + +A+ L ++M P+ VTY +I+ + G + +A E + +M
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC---RTAYNQVIENLCSFGYLE 599
KG+VP +YR +IH C G+ + K+ L K C Y ++ C G LE
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASE-AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 600 EAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPD 651
EA + ++++ D VL++ L L + + M +R L PD
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 204/423 (48%), Gaps = 14/423 (3%)
Query: 167 MARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNK 226
M + +E ++ LM Y GK+ A+ + M +AP++ T + L
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 227 LAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYT 286
+ A++ M + PN +TYN +I+GYC+ + A + + EM KG PD SY
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 287 VMGYLCKEKRIKEVRDLMEKM------VND---SNLFHD---QGRIEEAKELVNQMSQMG 334
++ LC + E + ++ + +N+ + L H +G++EEA + +M Q G
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 335 CIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAR 394
D+V Y +++G + + +L++M+ G KP+ V YT+ ++ G EA
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 395 EMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSL 454
+ + E PN +TY+ V++GL + G ++EA + +M P V + L
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL 762
Query: 455 CREGKMDGAKKF-MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPD 513
+ G++D K + + KG N + LIRGFC++G +EEA L+ M PD
Sbjct: 763 TK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPD 821
Query: 514 TVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLE 573
+TYTT+I+ L + V++A EL M KG+ P V Y T+IH C G + +L
Sbjct: 822 CITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRN 881
Query: 574 KML 576
+ML
Sbjct: 882 EML 884
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 199/410 (48%), Gaps = 18/410 (4%)
Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
A R+ M +GI F+ L+ RAG +R+A+ + + M + V PN + N I
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
++KA FL+ M GI P+ +Y LI G C + +A +D + C
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVN--------------DSNLFHDQGRIEEAKE 325
+++ Y ++ C+E +++E + ++MV D +L H ++
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG-- 668
Query: 326 LVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLC 385
L+ +M G PD V YT++++ + G+ +A + M + GC PN V+YTA +NGLC
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 386 HNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRR-EGKLSEACDVVREMVKKGFFPTP 444
G EA + + + PN +TY + L + E + +A + + + KG
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE-LHNAILKGLLANT 787
Query: 445 VEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD 504
N+LI+ CR+G+++ A + + + G + + + +T++I C++ D+++A+ L +
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 505 MYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRT 554
M PD V Y T+I G + +ATEL +ML +GL+P T RT
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/510 (23%), Positives = 221/510 (43%), Gaps = 60/510 (11%)
Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
R + + Y +++++ + A L M G++ ++ L+ + + G + A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
++ M + P ++ + + K+ KALR M GI P++ T+ L+ G
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
I+DA+KL +EM P++V+Y ++ C+E
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE----------------------- 555
Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
G + +A E + +M++ G +PD +Y +++G C G+ +AK + ++ C+ N + Y
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
T L+G C GK EA + + + + Y V++ G + +++EM
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
+G P V +I + + G A +N+GC N V +T++I G C+ G + E
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDALSKN------------------------------ 527
A L M P+ VTY +D L+K
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIR 795
Query: 528 -----GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QK 580
GR+EEA+EL+ +M+ G+ P +TY T+I+ C+ V+ ++L M K +
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 581 CRTAYNQVIENLCSFGYLEEAGKILGKVLR 610
R AYN +I C G + +A ++ ++LR
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLR 885
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 174/390 (44%), Gaps = 37/390 (9%)
Query: 323 AKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLN 382
A EL N M +G PDV YT V+ C + +L +AK+M+ M GC N V Y ++
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 383 GLCHNGKSLEAREMINTSEEEWWTPNAITY------------------------------ 412
GLC K EA + + P+ +TY
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 413 -----SVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFM 467
S ++ GLR+ GK+ EA ++V+ +V G P N LI SLC+ K A+
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 468 QECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKN 527
G N V ++ LI FC++G L+ ALS L +M Y ++I+ K
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 528 GRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKCRTAY-- 585
G + A M +M++K L PTVVTY +++ YC G++ L+L +M K + Y
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 586 NQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRMFN 645
++ L G + +A K+ ++ K + T +V++E Y +G A++ M
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 646 RNLIPDLKLCKKVSERLILEGKSEEADTLM 675
+ ++PD + + L L G++ EA +
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 173/398 (43%), Gaps = 29/398 (7%)
Query: 134 QWRYRHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGK 191
+W + + + Y +M+E + A L+ M +GI P+ +SY L+ G+
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI--VPDTYSYRPLIHGLCLTGQ 592
Query: 192 LRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNC 251
A + + K N + +H KL +AL + M G+ +++ Y
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 252 LIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS 311
LI G K L+ EM +G PD V Y +++ K KE + + M+N+
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE- 711
Query: 312 NLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCK 371
GC+P+ VTYTAV+NG C+ G +++A+ + +M
Sbjct: 712 ----------------------GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749
Query: 372 PNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDV 431
PN V+Y FL+ L ++ ++ + + N TY++++ G R+G++ EA ++
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASEL 809
Query: 432 VREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQ 491
+ M+ G P + +I LCR + A + KG + V + +LI G C
Sbjct: 810 ITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCV 869
Query: 492 KGDLEEALSLLDDMYLCKKDPDTVT--YTTIIDALSKN 527
G++ +A L ++M P+ T TT D SK+
Sbjct: 870 AGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDTSSKS 907
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 152/325 (46%), Gaps = 2/325 (0%)
Query: 330 MSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGK 389
++++ +P+V T +A+++G + A ++ M G +P+ YT + LC
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 390 SLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINL 449
A+EMI E N + Y+V++ GL ++ K+ EA + +++ K P V
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 450 LIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCK 509
L+ LC+ + + + M E L + + +SL+ G ++G +EEAL+L+ +
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 510 KDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLL 569
P+ Y +ID+L K + EA L +M GL P VTY +I +C+ G+++ L
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 570 KLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
L +M+ + YN +I C FG + A + +++ + T L+ Y
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 628 LNKGIPLLAYKVACRMFNRNLIPDL 652
+KG A ++ M + + P +
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSI 507
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 102/218 (46%), Gaps = 3/218 (1%)
Query: 412 YSVVMHGLRREGKLSEACDVVREMVKK-GFFPTPVEINLLIQSLCREGKMDGAKKFMQEC 470
+ +++ R ++ + V + M+ K P ++ L+ L + A + +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 471 LNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRV 530
++ G +V +T +IR C+ DL A ++ M D + V Y +ID L K +V
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 531 EEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQ--KCRTAYNQV 588
EA + + K L P VVTY T+++ C+V E L+++++ML + A + +
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 589 IENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVES 626
+E L G +EEA ++ +V+ + + L++S
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 230/473 (48%), Gaps = 14/473 (2%)
Query: 171 GIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKA 230
GI + ++ + R K A VL + K P+ NT I L + K+++A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 231 LRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGY 290
+ ++RM G P+V+TYN ++ G C A+ L+ +M + D +Y T++
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 291 LCKEKRIKEVRDLMEKM----VNDSNLFHDQ--------GRIEEAKELVNQMSQMGCIPD 338
LC++ I L ++M + S + ++ G+ + L+ M +P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 339 VVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMIN 398
V+T+ +++ F + G+L +A ++ ++M G PN ++Y ++G C + EA M++
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 399 TSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREG 458
+P+ +T++ ++ G ++ + V R + K+G V ++L+Q C+ G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 459 KMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYT 518
K+ A++ QE ++ G +V+ + L+ G C G LE+AL + +D+ K D V YT
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 519 TIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK 578
TII+ + K G+VE+A L + KG+ P V+TY +I C+ G + + LL KM
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Query: 579 QKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLN 629
YN +I G L + K++ ++ ADAS+ ++++ L+
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 213/468 (45%), Gaps = 16/468 (3%)
Query: 179 FSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQ 238
FS A +R + + ++ +A N+ N I+ K A L ++
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 239 LAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIK 298
G P+ T+N LIKG ++ +A+ L+D M GC PD V+Y +++ +C+
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 299 EVRDLMEKMVNDSNLFHD-------------QGRIEEAKELVNQMSQMGCIPDVVTYTAV 345
DL+ KM + N+ D G I+ A L +M G VVTY ++
Sbjct: 211 LALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 346 VNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWW 405
V G C+ G+ + +L+ M PN +++ L+ GK EA E+
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 406 TPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKK 465
+PN ITY+ +M G + +LSEA +++ MV+ P V LI+ C ++D K
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 466 FMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALS 525
+ +G N V ++ L++GFCQ G ++ A L +M PD +TY ++D L
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 526 KNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
NG++E+A E+ + + +V Y T+I C+ G+VED L + K +
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKG 631
Y +I LC G L EA +L K+ + + T + L+ ++L G
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 212/430 (49%), Gaps = 12/430 (2%)
Query: 160 AKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIH 219
A VL + + G E F+ L+ GK+ A+ ++ M + P+++ N+ ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 220 VLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSP 279
+ + AL L +M+ + +V TY+ +I C I AI L EM KG
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 280 DKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELV 327
V+Y +++ LCK + + L++ MV+ ++F +G+++EA EL
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 328 NQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHN 387
+M G P+++TY +++G+C L +A ML M + C P+ V++T+ + G C
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 388 GKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEI 447
+ + ++ + NA+TYS+++ G + GK+ A ++ +EMV G P +
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 448 NLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYL 507
+L+ LC GK++ A + ++ + +V +T++I G C+ G +E+A +L +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 508 CKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVED 567
P+ +TYT +I L K G + EA L+ KM G P TY T+I + + G +
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 568 LLKLLEKMLS 577
KL+E+M S
Sbjct: 562 SAKLIEEMKS 571
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 238/492 (48%), Gaps = 25/492 (5%)
Query: 194 NAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLI 253
+A+ + M ++ P+L+ + + + L F ++++L GI N+ T N +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 254 KGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL 313
+C + A ++ ++ G PD ++ T++ L E
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE------------------- 171
Query: 314 FHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPN 373
G++ EA LV++M + GC PDVVTY ++VNG CR G+ A +L++M K +
Sbjct: 172 ----GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 374 TVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVR 433
+Y+ ++ LC +G A + E + + +TY+ ++ GL + GK ++ +++
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 434 EMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKG 493
+MV + P + N+L+ +EGK+ A + +E + +G + N++ + +L+ G+C +
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 494 DLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYR 553
L EA ++LD M K PD VT+T++I RV++ ++ + +GLV VTY
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 554 TVIHRYCQVGRVEDLLKLLEKMLSKQKCR--TAYNQVIENLCSFGYLEEAGKILGKVLRT 611
++ +CQ G+++ +L ++M+S Y +++ LC G LE+A +I + ++
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 612 ASKADASTCHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEA 671
++E G A+ + C + + + P++ + L +G EA
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 672 DTLMLRFVERGH 683
+ L+ + E G+
Sbjct: 528 NILLRKMEEDGN 539
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 190/387 (49%), Gaps = 23/387 (5%)
Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
+ D Y +++ L + A + + M +GI+ ++ L+ +AGK +
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
+L M + PN++ N + V V KL +A + M GI+PN++TYN L+ GYC
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQ 317
+R+ +A ++D M CSPD V++ +++ C KR+
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV-------------------- 384
Query: 318 GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSY 377
++ ++ +S+ G + + VTY+ +V GFC+ G++ A+++ Q+M HG P+ ++Y
Sbjct: 385 ---DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 378 TAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVK 437
L+GLC NGK +A E+ ++ + Y+ ++ G+ + GK+ +A ++ +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 438 KGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEE 497
KG P + ++I LC++G + A +++ G A N + +LIR + GDL
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 498 ALSLLDDMYLCKKDPDTVTYTTIIDAL 524
+ L+++M C D + +ID L
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
D + Y ++L+ L + A + + + ++ ++ ++ + GK+ +A +
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
+ V PN++ I L L++A L +M+ G PN TYN LI+ +
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLME 305
+ + KLI+EM G S D S V+ L + K D++
Sbjct: 557 GDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDMLS 602
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 233/472 (49%), Gaps = 38/472 (8%)
Query: 143 VYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSY--LMVAYSRAGKLRNAMYVLS 200
+ +++ L + A+ + M +G C+P F++ L+ Y +AG + +L+
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKG--CKPNEFTFGILVRGYCKAGLTDKGLELLN 206
Query: 201 MMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLH 260
M+ V PN +I NT + + + + +E+M+ G+ P+++T+N I C
Sbjct: 207 AMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEG 266
Query: 261 RIKDAIKLIDEMPLK---GCS-PDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHD 316
++ DA ++ +M L G P+ ++Y ++ CK +++ + L E + + +L
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASL 326
Query: 317 Q------------GRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
Q G+ EA+ ++ QM+ G P + +Y +++G C++G L AK ++
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386
Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
M +G P+ V+Y L+G C GK A+ ++ PNA T ++++H L + G+
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
+SEA +++R+M +KG+ V N+++ LC G++D A + + KG V+
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV-----KGMRVH------ 495
Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKD--PDTVTYTTIIDALSKNGRVEEATELMMKMLS 542
G G+L + L D L + + PD +TY+T+++ L K GR EA L +M+
Sbjct: 496 ---GSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG 552
Query: 543 KGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENL 592
+ L P V Y IH +C+ G++ ++L+ M K K YN +I L
Sbjct: 553 EKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/524 (25%), Positives = 233/524 (44%), Gaps = 50/524 (9%)
Query: 147 MLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYS--RAGKLRNAMYVLSMMQK 204
++ I +K+ A +L+ R E +P + Y ++ S + ++ ++ M
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVL 140
Query: 205 AAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKD 264
+AP N I L + + A + M G PN T+ L++GYC
Sbjct: 141 CGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDK 200
Query: 265 AIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKM-----VNDSNLFHD--- 316
++L++ M G P+KV Y T++ C+E R + ++EKM V D F+
Sbjct: 201 GLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRIS 260
Query: 317 ----QGRIEEAKELVNQM---SQMGCI-PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHH 368
+G++ +A + + M +G P+ +TY ++ GFC+VG L+ AK + + + +
Sbjct: 261 ALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320
Query: 369 GCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEA 428
+ SY +L GL +GK +EA ++ ++ P+ +Y+++M GL + G LS+A
Sbjct: 321 DDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Query: 429 CDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRG 488
+V M + G P V L+ C GK+D AK +QE + C N L+
Sbjct: 381 KTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440
Query: 489 FCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG---- 544
+ G + EA LL M DTVT I+D L +G +++A E++ M G
Sbjct: 441 LWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL 500
Query: 545 -------------------LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRT 583
+P ++TY T+++ C+ GR + L +M+ + Q
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSV 560
Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESY 627
AYN I + C G + A ++L + + CH +E+Y
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKG-------CHKSLETY 597
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 231/520 (44%), Gaps = 40/520 (7%)
Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
R + I Y +ML+ K L + AK + + ++++ + R GK A
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
VL M + P++ N + L L+ A + M+ G+ P+ +TY CL+ GYC
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDS------ 311
+ ++ A L+ EM C P+ + ++ L K RI E +L+ KM
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 312 --NLFHD----QGRIEEAKELVNQMSQMG-----------------------CIPDVVTY 342
N+ D G +++A E+V M G C+PD++TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 343 TAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEE 402
+ ++NG C+ G +AK + +M +P++V+Y F++ C GK A ++ E+
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 403 EWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDG 462
+ + TY+ ++ GL + ++ E ++ EM +KG P N IQ LC K++
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVED 647
Query: 463 AKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDD-MYLCKKDPDTVTYTTII 521
A + E + K A NV +F LI FC+ D + A + + + +C + Y+ +
Sbjct: 648 ATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEG--LYSLMF 705
Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSKQKC 581
+ L G++ +ATEL+ +L +G Y+ ++ C+ +E +L KM+ +
Sbjct: 706 NELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYG 765
Query: 582 --RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
A VI+ L G +EA K++ AS + +
Sbjct: 766 FDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVAN 805
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 207/444 (46%), Gaps = 41/444 (9%)
Query: 237 MQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKR 296
M L GI P T+N LI+ CD + A +L DEMP KGC P++ ++ ++ CK
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 297 IKEVRDLMEKMVNDSNL------------FHDQGRIEEAKELVNQMSQMGCIPDVVTYTA 344
+ +L+ M + L F +GR ++++++V +M + G +PD+VT+ +
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Query: 345 VVNGFCRVGELDQAKKMLQQM----YHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTS 400
++ C+ G++ A ++ M Y +PN+++Y L G C G +A+ + +
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 401 EEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKM 460
E + +Y++ + GL R GK EA V+++M KG P+ N+L+ LC+ G +
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377
Query: 461 DGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTI 520
AK + G + V + L+ G+C G ++ A SLL +M P+ T +
Sbjct: 378 SDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNIL 437
Query: 521 IDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM----- 575
+ +L K GR+ EA EL+ KM KG VT ++ C G ++ +++++ M
Sbjct: 438 LHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497
Query: 576 -----------------LSKQKC---RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKA 615
L + C Y+ ++ LC G EA + +++ +
Sbjct: 498 AALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557
Query: 616 DASTCHVLVESYLNKGIPLLAYKV 639
D+ ++ + + +G A++V
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRV 581
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 161/353 (45%), Gaps = 6/353 (1%)
Query: 337 PDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREM 396
P V Y ++ + ++ + + M G P T ++ + LC + ARE+
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 397 INTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCR 456
+ E+ PN T+ +++ G + G + +++ M G P V N ++ S CR
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 457 EGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDM----YLCKKDP 512
EG+ D ++K +++ +G ++V F S I C++G + +A + DM YL P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 513 DTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLL 572
+++TY ++ K G +E+A L + + ++ +Y + + G+ + +L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 573 EKMLSKQKCRT--AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNK 630
++M K + +YN +++ LC G L +A I+G + R DA T L+ Y +
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 631 GIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERGH 683
G A + M N +P+ C + L G+ EA+ L+ + E+G+
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 239/505 (47%), Gaps = 17/505 (3%)
Query: 138 RHDPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMY 197
+HD Y ++ +L+++K+ A + + GI ++ + L+ + + R +
Sbjct: 107 KHD-FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTIN 165
Query: 198 VLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYC 257
V + ++ P+ + AI V + + K L RM+ I P+V YN LI G C
Sbjct: 166 VFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLC 225
Query: 258 DLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVND------- 310
R+ DA +L DEM + P ++Y T++ CK ++ + E+M D
Sbjct: 226 KGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLI 285
Query: 311 ------SNLFHDQGRIEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQ 364
LF G +E+A+ ++ +M +G +PD T++ + +G+ + + A + +
Sbjct: 286 TFNTLLKGLFK-AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 365 MYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGK 424
G K N + + LN LC GK +A E++ + PN + Y+ ++ G R+G
Sbjct: 345 AVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404
Query: 425 LSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTS 484
L A + M K+G P + N LI+ C G+M+ A+K + + KG + +V +
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI 464
Query: 485 LIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKG 544
LI G+ +K + ++ +L +M P+ V+Y T+I+ L K ++ EA + M +G
Sbjct: 465 LIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG 524
Query: 545 LVPTVVTYRTVIHRYCQVGRVEDLLKLLEKMLSK--QKCRTAYNQVIENLCSFGYLEEAG 602
+ P V Y +I C G++ED + ++ML K + YN +I+ L G L EA
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584
Query: 603 KILGKVLRTASKADASTCHVLVESY 627
+L ++ R K D T + L+ Y
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISGY 609
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/536 (26%), Positives = 243/536 (45%), Gaps = 29/536 (5%)
Query: 142 IVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSM 201
I + +L+ L K + + A+ VL+ M G FS L YS K A+ V
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 202 MQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHR 261
+ V N C+ ++ L K+ KA L R G+ PN + YN +I GYC
Sbjct: 345 AVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404
Query: 262 IKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIE 321
+ A I+ M +G PD ++Y ++ C + G +E
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFC-----------------------ELGEME 441
Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
A++ VN+M G P V TY ++ G+ R E D+ +L++M +G PN VSY +
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
N LC K LEA+ + E+ +P Y++++ G +GK+ +A +EM+KKG
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 442 PTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSL 501
V N LI L GK+ A+ + E KG +V + SLI G+ G+++ ++L
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621
Query: 502 LDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQ 561
++M P TY +I +K G E TE + +S L P ++ Y V+H Y
Sbjct: 622 YEEMKRSGIKPTLKTYHLLISLCTKEGI--ELTERLFGEMS--LKPDLLVYNGVLHCYAV 677
Query: 562 VGRVEDLLKLLEKMLSKQKC--RTAYNQVIENLCSFGYLEEAGKILGKVLRTASKADAST 619
G +E L ++M+ K +T YN +I G L E ++ ++ + +A T
Sbjct: 678 HGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADT 737
Query: 620 CHVLVESYLNKGIPLLAYKVACRMFNRNLIPDLKLCKKVSERLILEGKSEEADTLM 675
+++V+ + + AY M + + D+ + ++ L E +S+EA+ ++
Sbjct: 738 YNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVI 793
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 204/414 (49%), Gaps = 14/414 (3%)
Query: 176 PEAFSY--LMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRF 233
P F Y L+ + ++ +A + M + P+L+ NT I K+ +
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 234 LERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCK 293
ERM+ I P+++T+N L+KG ++DA ++ EM G PD ++ +
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 294 EKRIKEVRDLMEKMVNDS------------NLFHDQGRIEEAKELVNQMSQMGCIPDVVT 341
++ + + E V+ N +G+IE+A+E++ + G +P+ V
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 342 YTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGLCHNGKSLEAREMINTSE 401
Y +++G+CR G+L A+ ++ M G KP+ ++Y + C G+ A + +N +
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 402 EEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFFPTPVEINLLIQSLCREGKMD 461
+ +P+ TY++++ G R+ + + D+++EM G P V LI LC+ K+
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 462 GAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTII 521
A+ ++ ++G + V + LI G C KG +E+A +M + + VTY T+I
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 522 DALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYCQVGRVEDLLKLLEKM 575
D LS G++ EA +L++++ KGL P V TY ++I Y G V+ + L E+M
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 207/456 (45%), Gaps = 29/456 (6%)
Query: 140 DPIVYYMMLEILSKTKLCQGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVL 199
D + ++ + S + + A V G++ S L+ A + GK+ A +L
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 200 SMMQKAAVAPNLLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDL 259
+ PN +I NT I L A +E M+ G+ P+ L YNCLI+ +C+L
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Query: 260 HRIKDAIKLIDEMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGR 319
+++A K +++M LKG SP +Y ++G ++ + D++++M ++
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN--------- 488
Query: 320 IEEAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTA 379
G +P+VV+Y ++N C+ +L +A+ + + M G P Y
Sbjct: 489 --------------GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 380 FLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKG 439
++G C GK +A ++ N +TY+ ++ GL GKLSEA D++ E+ +KG
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 440 FFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLIRGFCQKGDLEEAL 499
P N LI G + +E G + + LI C K +E
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTE 653
Query: 500 SLLDDMYLCKKDPDTVTYTTIIDALSKNGRVEEATELMMKMLSKGLVPTVVTYRTVIHRY 559
L +M L PD + Y ++ + +G +E+A L +M+ K + TY ++I
Sbjct: 654 RLFGEMSL---KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710
Query: 560 CQVGRVEDLLKLLEKMLSKQKCRTA--YNQVIENLC 593
+VG++ ++ L+++M +++ A YN +++ C
Sbjct: 711 LKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHC 746
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 182/399 (45%), Gaps = 45/399 (11%)
Query: 325 ELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFLNGL 384
EL N+M P V Y +++G C+ ++ A+++ +M P+ ++Y ++G
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 385 CHNG---KSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREMVKKGFF 441
C G KS + RE + E P+ IT++ ++ GL + G + +A +V++EM GF
Sbjct: 260 CKAGNPEKSFKVRERMKADHIE---PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 442 P------------------------------TPVEIN-----LLIQSLCREGKMDGAKKF 466
P + V++N +L+ +LC+EGK++ A++
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 467 MQECLNKGCAVNVVNFTSLIRGFCQKGDLEEALSLLDDMYLCKKDPDTVTYTTIIDALSK 526
+ + KG N V + ++I G+C+KGDL A ++ M PD + Y +I +
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 527 NGRVEEATELMMKMLSKGLVPTVVTYRTVIHRYC---QVGRVEDLLKLLEKMLSKQKCRT 583
G +E A + + KM KG+ P+V TY +I Y + + D+LK +E +
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV-V 495
Query: 584 AYNQVIENLCSFGYLEEAGKILGKVLRTASKADASTCHVLVESYLNKGIPLLAYKVACRM 643
+Y +I LC L EA + + ++L++ +KG A++ + M
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Query: 644 FNRNLIPDLKLCKKVSERLILEGKSEEADTLMLRFVERG 682
+ + +L + + L + GK EA+ L+L +G
Sbjct: 556 LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 158/379 (41%), Gaps = 54/379 (14%)
Query: 158 QGAKRVLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPNLLICNTA 217
+ A++ + M +G+ E ++ L+ Y R + +L M+ PN++ T
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 218 IHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLIDEMPLKGC 277
I+ L G+KL +A M+ G++P V YN LI G C +I+DA + EM KG
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Query: 278 SPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNLFHDQGRIEEAKELVNQMSQMGCIP 337
+ V+Y T++ L G++ EA++L+ ++S+ G P
Sbjct: 561 ELNLVTYNTLIDGLSM-----------------------TGKLSEAEDLLLEISRKGLKP 597
Query: 338 DVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKP------------------------- 372
DV TY ++++G+ G + + + ++M G KP
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFG 657
Query: 373 ------NTVSYTAFLNGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLS 426
+ + Y L+ +G +A + E+ + TY+ ++ G + GKL
Sbjct: 658 EMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 717
Query: 427 EACDVVREMVKKGFFPTPVEINLLIQSLCREGKMDGAKKFMQECLNKGCAVNVVNFTSLI 486
E ++ EM + P N++++ C A + +E KG ++V L+
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELV 777
Query: 487 RGFCQKGDLEEALSLLDDM 505
G ++ +EA ++ +M
Sbjct: 778 SGLKEEWRSKEAEIVISEM 796
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 133/294 (45%), Gaps = 15/294 (5%)
Query: 156 LCQGAKR-----VLRLMARRGIECRPEAFSYLMVAYSRAGKLRNAMYVLSMMQKAAVAPN 210
LC+G+K V R M RG+ + ++ L+ GK+ +A M K + N
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN 563
Query: 211 LLICNTAIHVLVVGNKLAKALRFLERMQLAGITPNVLTYNCLIKGYCDLHRIKDAIKLID 270
L+ NT I L + KL++A L + G+ P+V TYN LI GY ++ I L +
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYE 623
Query: 271 EMPLKGCSPDKVSYYTVMGYLCKEKRIKEVRDLMEKMVNDSNL---------FHDQGRIE 321
EM G P +Y+ ++ LC ++ I+ L +M +L + G +E
Sbjct: 624 EMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDME 682
Query: 322 EAKELVNQMSQMGCIPDVVTYTAVVNGFCRVGELDQAKKMLQQMYHHGCKPNTVSYTAFL 381
+A L QM + D TY +++ G +VG+L + + ++ +M +P +Y +
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 382 NGLCHNGKSLEAREMINTSEEEWWTPNAITYSVVMHGLRREGKLSEACDVVREM 435
G C + A +E+ + + + ++ GL+ E + EA V+ EM
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 248,559,871
Number of Sequences: 539616
Number of extensions: 10186341
Number of successful extensions: 40179
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 28421
Number of HSP's gapped (non-prelim): 2964
length of query: 701
length of database: 191,569,459
effective HSP length: 125
effective length of query: 576
effective length of database: 124,117,459
effective search space: 71491656384
effective search space used: 71491656384
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)