Query 037698
Match_columns 314
No_of_seqs 233 out of 1389
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 03:32:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037698.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037698hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00176 galactinol synthase 100.0 4E-66 8.8E-71 471.8 27.8 311 3-314 21-333 (333)
2 cd02537 GT8_Glycogenin Glycoge 100.0 1.2E-45 2.5E-50 328.4 22.9 237 5-276 1-240 (240)
3 cd00505 Glyco_transf_8 Members 100.0 5.9E-38 1.3E-42 280.1 19.2 223 6-250 2-246 (246)
4 cd06914 GT8_GNT1 GNT1 is a fun 100.0 1.1E-37 2.4E-42 278.9 17.5 230 5-275 1-277 (278)
5 PRK15171 lipopolysaccharide 1, 100.0 6.4E-38 1.4E-42 290.4 15.0 247 6-279 25-292 (334)
6 cd04194 GT8_A4GalT_like A4GalT 100.0 1.6E-36 3.5E-41 271.1 12.8 219 11-250 5-248 (248)
7 cd06431 GT8_LARGE_C LARGE cata 100.0 1.1E-34 2.4E-39 262.2 18.2 243 5-279 3-274 (280)
8 COG1442 RfaJ Lipopolysaccharid 100.0 1.3E-34 2.7E-39 264.0 16.6 222 11-252 7-248 (325)
9 PF01501 Glyco_transf_8: Glyco 100.0 2.5E-35 5.3E-40 262.1 10.6 226 10-251 3-249 (250)
10 cd06429 GT8_like_1 GT8_like_1 100.0 3.8E-34 8.2E-39 255.3 15.9 213 11-274 5-257 (257)
11 PLN02523 galacturonosyltransfe 100.0 2.3E-28 5E-33 231.6 15.9 240 18-277 258-549 (559)
12 cd06430 GT8_like_2 GT8_like_2 100.0 8.1E-28 1.8E-32 217.0 16.4 218 8-246 3-257 (304)
13 PLN02718 Probable galacturonos 100.0 3.1E-28 6.8E-33 233.2 13.1 242 14-275 320-591 (603)
14 cd06432 GT8_HUGT1_C_like The C 99.9 3.3E-27 7.2E-32 210.3 13.7 214 12-242 7-239 (248)
15 PLN02867 Probable galacturonos 99.9 5.4E-27 1.2E-31 222.5 8.6 175 81-274 330-522 (535)
16 PLN02769 Probable galacturonos 99.9 4.2E-26 9.2E-31 219.6 12.9 171 81-277 437-620 (629)
17 PLN02659 Probable galacturonos 99.9 2E-26 4.3E-31 217.8 8.4 182 81-278 329-524 (534)
18 PLN02870 Probable galacturonos 99.9 9.9E-26 2.2E-30 213.1 8.1 177 80-275 327-520 (533)
19 PLN02742 Probable galacturonos 99.9 5.8E-25 1.3E-29 208.3 12.5 177 81-277 338-525 (534)
20 PLN02829 Probable galacturonos 99.9 5.7E-25 1.2E-29 210.5 9.0 175 81-276 442-628 (639)
21 PLN02910 polygalacturonate 4-a 99.9 3.3E-24 7.1E-29 205.0 8.3 175 81-276 460-646 (657)
22 COG5597 Alpha-N-acetylglucosam 99.8 3.6E-20 7.7E-25 162.9 0.3 217 38-272 106-354 (368)
23 KOG1950 Glycosyl transferase, 99.3 5.1E-12 1.1E-16 119.3 7.2 199 83-282 113-326 (369)
24 PF03407 Nucleotid_trans: Nucl 98.3 1.1E-05 2.3E-10 70.3 11.8 171 45-242 11-201 (212)
25 PF11051 Mannosyl_trans3: Mann 98.2 6.3E-06 1.4E-10 74.7 8.6 104 13-119 8-115 (271)
26 KOG1879 UDP-glucose:glycoprote 96.8 0.0052 1.1E-07 64.5 8.7 221 11-252 1187-1427(1470)
27 PLN03182 xyloglucan 6-xylosylt 95.3 0.098 2.1E-06 49.3 8.7 141 83-252 181-366 (429)
28 PF05637 Glyco_transf_34: gala 95.0 0.012 2.6E-07 52.3 1.7 78 161-242 140-231 (239)
29 KOG1928 Alpha-1,4-N-acetylgluc 92.3 0.15 3.3E-06 47.6 3.8 72 99-206 242-316 (409)
30 PF07801 DUF1647: Protein of u 92.2 1.1 2.3E-05 36.4 8.1 60 3-65 60-121 (142)
31 PLN03181 glycosyltransferase; 88.7 2.5 5.5E-05 40.2 8.5 113 83-220 182-326 (453)
32 cd02515 Glyco_transf_6 Glycosy 88.1 3.4 7.4E-05 37.1 8.5 27 194-220 219-247 (271)
33 KOG4748 Subunit of Golgi manno 83.2 12 0.00026 35.1 9.8 82 158-242 241-332 (364)
34 cd02525 Succinoglycan_BP_ExoA 80.8 6.4 0.00014 33.9 7.1 87 19-115 13-103 (249)
35 PF00535 Glycos_transf_2: Glyc 80.4 1.2 2.6E-05 35.5 2.1 86 20-117 12-102 (169)
36 cd04186 GT_2_like_c Subfamily 78.3 13 0.00029 29.4 7.8 81 18-110 9-90 (166)
37 PF03414 Glyco_transf_6: Glyco 77.3 21 0.00045 33.3 9.3 190 11-222 106-314 (337)
38 cd06439 CESA_like_1 CESA_like_ 76.4 11 0.00023 32.8 7.2 87 19-116 42-132 (251)
39 cd00761 Glyco_tranf_GTA_type G 76.1 8 0.00017 29.7 5.7 83 18-112 9-95 (156)
40 PRK15384 type III secretion sy 75.7 2.6 5.6E-05 37.1 2.8 25 95-119 216-240 (336)
41 PRK15382 non-LEE encoded effec 75.5 2.8 6E-05 36.9 3.0 25 95-119 211-235 (326)
42 PRK15383 type III secretion sy 75.0 2.8 6.2E-05 36.9 2.9 25 95-119 219-243 (335)
43 PF10111 Glyco_tranf_2_2: Glyc 74.4 8.3 0.00018 34.8 6.1 88 19-116 17-111 (281)
44 PF04488 Gly_transf_sug: Glyco 73.4 1.9 4.1E-05 32.7 1.4 87 22-116 5-98 (103)
45 cd06434 GT2_HAS Hyaluronan syn 72.6 27 0.00058 29.9 8.7 93 19-125 14-110 (235)
46 KOG1950 Glycosyl transferase, 72.5 1.8 4E-05 40.9 1.3 37 80-116 149-185 (369)
47 cd06427 CESA_like_2 CESA_like_ 71.3 25 0.00053 30.5 8.2 84 19-110 14-100 (241)
48 PRK10073 putative glycosyl tra 70.8 14 0.00031 34.2 6.8 103 1-116 1-108 (328)
49 cd06423 CESA_like CESA_like is 70.0 13 0.00028 29.3 5.7 87 19-114 10-99 (180)
50 cd06433 GT_2_WfgS_like WfgS an 66.1 26 0.00057 28.7 7.0 85 19-115 11-97 (202)
51 cd02520 Glucosylceramide_synth 65.6 12 0.00025 31.4 4.8 36 19-55 14-50 (196)
52 PRK11204 N-glycosyltransferase 65.1 15 0.00033 35.0 6.0 83 19-110 67-150 (420)
53 cd02522 GT_2_like_a GT_2_like_ 64.5 33 0.00071 28.9 7.4 77 18-110 11-88 (221)
54 cd06421 CESA_CelA_like CESA_Ce 63.0 41 0.00089 28.5 7.8 82 20-110 16-100 (234)
55 cd02510 pp-GalNAc-T pp-GalNAc- 62.7 18 0.0004 32.6 5.8 87 19-116 12-106 (299)
56 TIGR03469 HonB hopene-associat 60.6 23 0.0005 33.5 6.2 22 95-116 134-156 (384)
57 cd06442 DPM1_like DPM1_like re 59.3 15 0.00032 31.2 4.3 86 19-116 10-101 (224)
58 PRK10063 putative glycosyl tra 57.8 56 0.0012 28.8 7.9 83 18-111 13-99 (248)
59 cd06437 CESA_CaSu_A2 Cellulose 56.8 74 0.0016 27.2 8.4 19 92-110 85-103 (232)
60 cd04195 GT2_AmsE_like GT2_AmsE 56.5 46 0.00099 27.5 6.9 82 19-110 13-96 (201)
61 cd04179 DPM_DPG-synthase_like 56.3 16 0.00034 29.9 3.8 89 19-116 10-102 (185)
62 COG0463 WcaA Glycosyltransfera 55.6 36 0.00079 27.1 6.0 87 15-111 12-99 (291)
63 cd04185 GT_2_like_b Subfamily 54.6 33 0.00072 28.5 5.7 85 19-110 10-95 (202)
64 PF05704 Caps_synth: Capsular 53.0 59 0.0013 29.4 7.3 77 20-116 62-143 (276)
65 cd02511 Beta4Glucosyltransfera 52.9 73 0.0016 27.4 7.7 76 19-111 13-88 (229)
66 cd04192 GT_2_like_e Subfamily 51.7 44 0.00096 28.1 6.1 19 92-110 80-98 (229)
67 cd06438 EpsO_like EpsO protein 51.3 86 0.0019 25.7 7.6 80 19-110 10-97 (183)
68 cd02514 GT13_GLCNAC-TI GT13_GL 50.6 1E+02 0.0022 28.8 8.5 99 17-116 11-119 (334)
69 cd04196 GT_2_like_d Subfamily 49.5 56 0.0012 27.1 6.3 90 19-117 11-103 (214)
70 cd06420 GT2_Chondriotin_Pol_N 49.0 59 0.0013 26.3 6.2 81 19-110 10-95 (182)
71 PF04765 DUF616: Protein of un 48.4 60 0.0013 29.9 6.5 99 4-117 64-175 (305)
72 PRK14583 hmsR N-glycosyltransf 46.0 41 0.0009 32.5 5.5 18 93-110 154-171 (444)
73 cd06913 beta3GnTL1_like Beta 1 45.7 1.1E+02 0.0024 25.8 7.7 89 18-115 9-106 (219)
74 PRK13915 putative glucosyl-3-p 45.6 92 0.002 28.5 7.5 89 19-116 44-139 (306)
75 TIGR03472 HpnI hopanoid biosyn 44.0 39 0.00084 31.8 4.8 19 92-110 124-142 (373)
76 PLN02726 dolichyl-phosphate be 43.4 74 0.0016 27.6 6.3 24 93-116 92-116 (243)
77 PF01793 Glyco_transf_15: Glyc 42.2 81 0.0017 29.4 6.4 112 3-116 55-197 (328)
78 PF03314 DUF273: Protein of un 41.8 18 0.00039 31.4 1.9 84 92-207 39-127 (222)
79 cd04184 GT2_RfbC_Mx_like Myxoc 41.0 88 0.0019 25.7 6.2 81 18-110 14-99 (202)
80 TIGR03111 glyc2_xrt_Gpos1 puta 39.8 60 0.0013 31.3 5.5 81 19-110 62-147 (439)
81 PF03071 GNT-I: GNT-I family; 35.0 1.5E+02 0.0033 28.8 7.2 103 10-116 99-213 (434)
82 COG1216 Predicted glycosyltran 32.6 1.4E+02 0.0029 27.2 6.4 95 14-117 11-108 (305)
83 cd04187 DPM1_like_bac Bacteria 31.8 1.1E+02 0.0023 24.9 5.1 24 94-117 80-104 (181)
84 COG5020 KTR1 Mannosyltransfera 29.3 1.6E+02 0.0034 28.1 6.0 112 3-116 81-223 (399)
85 KOG4472 Glycolipid 2-alpha-man 29.3 1.6E+02 0.0034 28.1 6.0 112 3-116 81-223 (399)
86 PRK10018 putative glycosyl tra 29.1 4.3E+02 0.0093 23.8 9.4 25 92-116 83-108 (279)
87 PF13704 Glyco_tranf_2_4: Glyc 26.5 2.4E+02 0.0052 20.3 5.8 68 35-110 19-87 (97)
88 PRK11498 bcsA cellulose syntha 24.8 4.2E+02 0.0092 28.3 9.0 62 38-111 295-356 (852)
89 PF11735 CAP59_mtransfer: Cryp 24.4 2.6E+02 0.0057 24.8 6.5 25 93-118 111-136 (241)
90 PRK09722 allulose-6-phosphate 23.7 4.1E+02 0.0088 23.4 7.5 57 7-63 133-196 (229)
91 PF11316 Rhamno_transf: Putati 22.8 1.3E+02 0.0029 26.5 4.2 35 22-56 45-80 (234)
92 PLN02565 cysteine synthase 22.2 3.4E+02 0.0073 25.1 7.1 48 13-65 74-121 (322)
93 TIGR00640 acid_CoA_mut_C methy 22.2 3.2E+02 0.0069 21.6 6.0 45 13-58 62-106 (132)
94 cd02071 MM_CoA_mut_B12_BD meth 21.8 3.3E+02 0.0072 20.9 6.0 45 13-58 59-103 (122)
95 cd04188 DPG_synthase DPG_synth 21.8 94 0.002 26.0 3.1 24 93-116 81-105 (211)
96 COG0031 CysK Cysteine synthase 21.3 2.2E+02 0.0048 26.2 5.5 32 34-65 85-116 (300)
97 PRK08091 ribulose-phosphate 3- 20.2 5E+02 0.011 22.8 7.3 55 7-61 143-204 (228)
98 TIGR02035 D_Ser_am_lyase D-ser 20.2 3.6E+02 0.0078 26.2 7.0 31 34-64 175-205 (431)
No 1
>PLN00176 galactinol synthase
Probab=100.00 E-value=4e-66 Score=471.84 Aligned_cols=311 Identities=79% Similarity=1.381 Sum_probs=277.5
Q ss_pred CCeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccc
Q 037698 3 SKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVI 82 (314)
Q Consensus 3 ~~~A~vT~l~~d~~Yl~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~ 82 (314)
+++||||+|++|++|++|++||++||+++++.++++|++++++++++++.|++.|+.+++|+++.+++++.++..+++..
T Consensus 21 ~~~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~~i~~~~~~~~~~~~~~~i 100 (333)
T PLN00176 21 AKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQGCIVREIEPVYPPENQTQFAMAYYVI 100 (333)
T ss_pred CceEEEEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCcccccccccchhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999887766555565556678
Q ss_pred ccchhhhccccccceEEEEecCeeeccCchhhhcCCCCceecccchhcccCCCCCCcccccccccCCCCCCCCCCCCCCC
Q 037698 83 NYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPP 162 (314)
Q Consensus 83 ~y~KL~i~~l~~ydrvlYLD~D~lv~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g~~~ 162 (314)
+|+||++|++++|+||||||+|+||++|||+||+++.+.+|||.||+|+..++++|++.+++|+.+|++++||..+|.++
T Consensus 101 ~~tKl~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~~~g~~~ 180 (333)
T PLN00176 101 NYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPAELGPPP 180 (333)
T ss_pred hhhhhhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchhhccchhhccCCC
Confidence 89999999999999999999999999999999999777799999999998899999999999999998999997777666
Q ss_pred CCcccceEEEEecCHHHHHHHHHHHhcCCCCCCCchhHHHHHHccCceecCCcccccccccccCCCCCCCCCeEEEEeeC
Q 037698 163 PKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPEHVETEKVKVVHYCA 242 (314)
Q Consensus 163 ~~yfNsGvmli~~~~~~~~~ll~~~~~~~~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~IiHf~g 242 (314)
..|||||||||+|+..+++++++.+.......|+|||+||.+|.++|..||.+||++..+.|++++.|+.++++||||+|
T Consensus 181 ~~yFNSGVlvinps~~~~~~ll~~l~~~~~~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~~~~~~~~~~~vkIIHY~~ 260 (333)
T PLN00176 181 PLYFNAGMFVFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLWRHPENVELDKVKVVHYCA 260 (333)
T ss_pred CCeEEeEEEEEEcCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHcCcEEECCchhcCchhhhhhChhhcccCCcEEEEeeC
Confidence 78999999999999999999999987665678999999999999999999999999988888888888888999999996
Q ss_pred CCCCCCCcCCCCCCCChhhhHHHHHHHHHHHhhccccccchhh--hhhhhhhhhhhhcccCCCccccccCCCCC
Q 037698 243 SGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSLDYKNLAM--DDNAKLNLLIEVLDDDDAITKPKKAPSAA 314 (314)
Q Consensus 243 ~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (314)
+..|||+..+.++++++++...+.++||.+|+++..++++... .+...+++++..+.....+ +--.|||||
T Consensus 261 ~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 333 (333)
T PLN00176 261 AGSKPWRYTGKEENMDREDIKMLVKKWWDIYNDESLDYKNFVPADEEEVKLQPFIAALSEAGVV-SYVPAPSAA 333 (333)
T ss_pred CCCCCCCCCCcccCCChHHHHHHHHHHHHHhccccccccccccccccccccchhhhhccccccc-ccccCCCCC
Confidence 3579999998888999999999999999999999999986553 4556677888888766543 334589987
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=100.00 E-value=1.2e-45 Score=328.39 Aligned_cols=237 Identities=39% Similarity=0.729 Sum_probs=196.2
Q ss_pred eEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhccccccc
Q 037698 5 RAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINY 84 (314)
Q Consensus 5 ~A~vT~l~~d~~Yl~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y 84 (314)
.||||++ +|++|+.++.|+++||++++++++++++++++++++.++.|++.+.+++.++.+..+.........++..+|
T Consensus 1 ~ay~t~~-~~~~Y~~~a~vl~~SL~~~~~~~~~~vl~~~~is~~~~~~L~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~ 79 (240)
T cd02537 1 EAYVTLL-TNDDYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDSANLLKRPRFKDTY 79 (240)
T ss_pred CEEEEEe-cChhHHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEecCccCCcchhhhccchHHHHHh
Confidence 4899965 688999999999999999999999999999999999999999999998888887654321111223456789
Q ss_pred chhhhccccccceEEEEecCeeeccCchhhhcCCCCceecccchhcccCCCCCCcccccccccCCCCCCCCCCCCCCCCC
Q 037698 85 SKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPK 164 (314)
Q Consensus 85 ~KL~i~~l~~ydrvlYLD~D~lv~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g~~~~~ 164 (314)
+||++|++.+||||||||+|++|++||++||++ +..++|+.|.. + ..
T Consensus 80 ~kl~~~~l~~~drvlylD~D~~v~~~i~~Lf~~-~~~~~a~~d~~------------------------~--------~~ 126 (240)
T cd02537 80 TKLRLWNLTEYDKVVFLDADTLVLRNIDELFDL-PGEFAAAPDCG------------------------W--------PD 126 (240)
T ss_pred HHHHhccccccceEEEEeCCeeEccCHHHHhCC-CCceeeecccC------------------------c--------cc
Confidence 999999999999999999999999999999999 44588876521 0 26
Q ss_pred cccceEEEEecCHHHHHHHHHHHhcCCCCCCCchhHHHHHHccC--ceecCCcccccccccccCCC-CCCCCCeEEEEee
Q 037698 165 YFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRNI--YKPISHTYNFVLAMLWRHPE-HVETEKVKVVHYC 241 (314)
Q Consensus 165 yfNsGvmli~~~~~~~~~ll~~~~~~~~~~~~DQdiLN~~f~~~--~~~Lp~~yN~~~~~~~~~~~-~~~~~~~~IiHf~ 241 (314)
|||||||+++++...++++++.+.+...+.++||++||.+|+++ |..||.+||++....+.+++ .+...+++||||+
T Consensus 127 ~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~DQdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~ 206 (240)
T cd02537 127 LFNSGVFVLKPSEETFNDLLDALQDTPSFDGGDQGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFI 206 (240)
T ss_pred cccceEEEEcCCHHHHHHHHHHHhccCCCCCCCHHHHHHHHcCCCCEeECCcceeeehhhhccCchhhcccCCcEEEEEe
Confidence 99999999999999999999999876557789999999999999 99999999999765443333 3446789999999
Q ss_pred CCCCCCCCcCCCCCCCChhhhHHHHHHHHHHHhhc
Q 037698 242 ASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDK 276 (314)
Q Consensus 242 g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~ 276 (314)
| ..|||+....+.+-.+.+.......||++|.++
T Consensus 207 g-~~KPW~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 240 (240)
T cd02537 207 G-GDKPWSWWRDPETKEKDDYNELHQWWWDIYDEL 240 (240)
T ss_pred C-CCCCCCCCcCCCcccccchHHHHHHHHHHHhhC
Confidence 9 799999876544433455678999999999863
No 3
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=5.9e-38 Score=280.14 Aligned_cols=223 Identities=24% Similarity=0.397 Sum_probs=160.0
Q ss_pred EEEEEeeeCcccHHHHHHHHHHHHhcCCC-CcEEEEECCCCCHHHHHHHHHcC----C--EEEEecccCCCCch-hhhh-
Q 037698 6 AYVTFLAGNGDYVKGVVGLVKGLRKAKSA-YPLAVAVLPDVPADHRKILVSQG----C--IVREIQPVYPPENQ-TQFA- 76 (314)
Q Consensus 6 A~vT~l~~d~~Yl~~~~vl~~SL~~~~~~-~~ivvlv~~~ls~~~~~~L~~~~----~--~v~~i~~i~~~~~~-~~~~- 76 (314)
++++ +++|++|+.++.|+++||++++++ +.++ +++++++++.++.|++.. . +++.++ .+... ....
T Consensus 2 ~i~~-~a~d~~y~~~~~v~i~Sl~~~~~~~~~~~-il~~~is~~~~~~L~~~~~~~~~~i~~~~~~---~~~~~~~~~~~ 76 (246)
T cd00505 2 AIVI-VATGDEYLRGAIVLMKSVLRHRTKPLRFH-VLTNPLSDTFKAALDNLRKLYNFNYELIPVD---ILDSVDSEHLK 76 (246)
T ss_pred eEEE-EecCcchhHHHHHHHHHHHHhCCCCeEEE-EEEccccHHHHHHHHHHHhccCceEEEEecc---ccCcchhhhhc
Confidence 5666 567889999999999999999875 3334 556889999999988742 2 233332 22111 1111
Q ss_pred hcccccccchhhhccccc-cceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCCCCCCcccccccccCCCCCC
Q 037698 77 MAYYVINYSKLRIWEFVE-YAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVK 153 (314)
Q Consensus 77 ~~~~~~~y~KL~i~~l~~-ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~ 153 (314)
...+..+|+||++|++++ ++||||||+|+||++||++||+++ +..+|||+|+........ + ....+
T Consensus 77 ~~~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~---~--------~~~~~ 145 (246)
T cd00505 77 RPIKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKY---Y--------RQKRS 145 (246)
T ss_pred CccccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccch---h--------hcccC
Confidence 234678999999999887 999999999999999999999985 457899988642110000 0 00111
Q ss_pred CCCCCCCCCCCcccceEEEEecCHHHHHHHHHHHh----c-CCCCCCCchhHHHHHHccC---ceecCCccccccccccc
Q 037698 154 WPASMGSPPPKYFNAGMFVYEPNLLTYSHLLETLK----V-TPPSSFAEQDFLNNFFRNI---YKPISHTYNFVLAMLWR 225 (314)
Q Consensus 154 ~p~~~g~~~~~yfNsGvmli~~~~~~~~~ll~~~~----~-~~~~~~~DQdiLN~~f~~~---~~~Lp~~yN~~~~~~~~ 225 (314)
+ .....||||||||+|+++..++++++.+. + .....++|||+||.+|.++ +..||.+||++....+.
T Consensus 146 ~-----~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~ 220 (246)
T cd00505 146 H-----LAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYR 220 (246)
T ss_pred C-----CCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcCCCeEEECCCeeeEEecCccc
Confidence 1 12347999999999999988777765532 2 2346789999999999998 99999999999864433
Q ss_pred CCCCC--CCCCeEEEEeeCCCCCCCCc
Q 037698 226 HPEHV--ETEKVKVVHYCASGSKPWRY 250 (314)
Q Consensus 226 ~~~~~--~~~~~~IiHf~g~~~KPW~~ 250 (314)
....+ ...+++||||+| ..|||+.
T Consensus 221 ~~~~~~~~~~~~~iiHy~g-~~KPW~~ 246 (246)
T cd00505 221 SLNCFKAFVKNAKVIHFNG-PTKPWNK 246 (246)
T ss_pred cccchhhhcCCCEEEEeCC-CCCCCCC
Confidence 22111 267999999999 8999963
No 4
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=100.00 E-value=1.1e-37 Score=278.92 Aligned_cols=230 Identities=26% Similarity=0.399 Sum_probs=174.3
Q ss_pred eEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHH-------HHHcCCEEEEecccCCCCchhhhhh
Q 037698 5 RAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKI-------LVSQGCIVREIQPVYPPENQTQFAM 77 (314)
Q Consensus 5 ~A~vT~l~~d~~Yl~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~-------L~~~~~~v~~i~~i~~~~~~~~~~~ 77 (314)
+||||++ +++.|++||+++++||+++++.+++|+|++++++...... +...+..+..|+.+..+. ..
T Consensus 1 fAYvtl~-Tn~~YL~gAlvL~~sLr~~gs~~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~~~-----~~ 74 (278)
T cd06914 1 YAYVNYA-TNADYLCNALILFEQLRRLGSKAKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASG-----GD 74 (278)
T ss_pred CeEEEEe-cChhHHHHHHHHHHHHHHhCCCCCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccCCC-----CC
Confidence 5999976 5899999999999999999999999999999988654322 233456666666544332 12
Q ss_pred cccccccchhhhccccccceEEEEecCeeeccCchhhhcCCC-CceecccchhcccCCCCCCcccccccccCCCCCCCCC
Q 037698 78 AYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPN-GYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPA 156 (314)
Q Consensus 78 ~~~~~~y~KL~i~~l~~ydrvlYLD~D~lv~~dideLf~~~~-~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~ 156 (314)
..+..+|+||.+|++++|+||||||||++|+++||+||+++. ..+||+ + .+
T Consensus 75 ~~~~~~~tKl~~~~l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap-~------------------------~~--- 126 (278)
T cd06914 75 AYWAKSLTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAP-R------------------------AY--- 126 (278)
T ss_pred ccHHHHHHHHHhccccceeeEEEecCChhhhcChHHHhcCCcccceeee-c------------------------Cc---
Confidence 234557999999999999999999999999999999999973 334442 1 01
Q ss_pred CCCCCCCCcccceEEEEecCHHHHHHHHHHHhcCC--CCCCCchhHHHHHHccC-------ceecCCc-cccccccccc-
Q 037698 157 SMGSPPPKYFNAGMFVYEPNLLTYSHLLETLKVTP--PSSFAEQDFLNNFFRNI-------YKPISHT-YNFVLAMLWR- 225 (314)
Q Consensus 157 ~~g~~~~~yfNsGvmli~~~~~~~~~ll~~~~~~~--~~~~~DQdiLN~~f~~~-------~~~Lp~~-yN~~~~~~~~- 225 (314)
.|||||||||+|+.+.++++++.+.+.. +..++|||+||.+|.++ +..||.+ ||+..+....
T Consensus 127 -------~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~ 199 (278)
T cd06914 127 -------WKFASHLMVIKPSKEAFKELMTEILPAYLNKKNEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFREK 199 (278)
T ss_pred -------ceecceeEEEeCCHHHHHHHHHHHHHhcccCCCCCChHHHHHHHhCCccccCcceEEcCccccccCChhhccc
Confidence 3899999999999999999999986532 33679999999999999 9999996 9999863211
Q ss_pred -------C----CCCCC----CCCeEEEEeeCCC-CCCCCcCCCC--------CC-C---ChhhhHHHHHHHHHHHhh
Q 037698 226 -------H----PEHVE----TEKVKVVHYCASG-SKPWRYTGKE--------EN-M---DREDIKMLVKKWKDIYED 275 (314)
Q Consensus 226 -------~----~~~~~----~~~~~IiHf~g~~-~KPW~~~~~~--------~~-~---~~~~~~~~~~~Ww~~~~~ 275 (314)
. .+.|+ ..+.++|||+.++ +|||...+.+ |. . ..++-+..+++|+..|++
T Consensus 200 ~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~iW~~~y~~ 277 (278)
T cd06914 200 LHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNNLEDIYCIEKIYCKMVKPRLEDDCRACDLWNSLYAD 277 (278)
T ss_pred CHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcCHHHHHHhCCccccCCCCCccCcchHHHHHHHHhhc
Confidence 1 12343 4689999999843 6999986531 11 0 112335778999998875
No 5
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=6.4e-38 Score=290.39 Aligned_cols=247 Identities=15% Similarity=0.221 Sum_probs=169.3
Q ss_pred EEEEEeeeCcccHHHHHHHHHHHHhcCCCCcE-EEEECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhhhh--hc
Q 037698 6 AYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPL-AVAVLPDVPADHRKILVSQ----GCIVREIQPVYPPENQTQFA--MA 78 (314)
Q Consensus 6 A~vT~l~~d~~Yl~~~~vl~~SL~~~~~~~~i-vvlv~~~ls~~~~~~L~~~----~~~v~~i~~i~~~~~~~~~~--~~ 78 (314)
.+-.++++|++|++++.|++.||+.|+++.++ ++++++++|+++++.|++. +..+. +..++.. ....+. ..
T Consensus 25 ~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~-~~~id~~-~~~~~~~~~~ 102 (334)
T PRK15171 25 SLDIAYGIDKNFLFGCGVSIASVLLNNPDKSLVFHVFTDYISDADKQRFSALAKQYNTRIN-IYLINCE-RLKSLPSTKN 102 (334)
T ss_pred ceeEEEECcHhhHHHHHHHHHHHHHhCCCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEE-EEEeCHH-HHhCCcccCc
Confidence 34444788999999999999999998876543 2355689999998877654 33332 2222211 111111 12
Q ss_pred ccccccchhhhcccc--ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCCCCCCcccccccccCCCCCCC
Q 037698 79 YYVINYSKLRIWEFV--EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKW 154 (314)
Q Consensus 79 ~~~~~y~KL~i~~l~--~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~ 154 (314)
.+.++|+||++++++ ++|||||||+|+||++||++||+++ +..+|||.+... ..+ ..... .+++.
T Consensus 103 ~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~-~~~------~~~~~----~~l~~ 171 (334)
T PRK15171 103 WTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGD-AEW------WSKRA----QSLQT 171 (334)
T ss_pred CCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccc-hhH------HHHHH----HhcCC
Confidence 356789999999976 5999999999999999999999984 356877743210 000 00000 01222
Q ss_pred CCCCCCCCCCcccceEEEEecCHHHH----HHHHHHHhcC---CCCCCCchhHHHHHHccCceecCCcccccccccccCC
Q 037698 155 PASMGSPPPKYFNAGMFVYEPNLLTY----SHLLETLKVT---PPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHP 227 (314)
Q Consensus 155 p~~~g~~~~~yfNsGvmli~~~~~~~----~~ll~~~~~~---~~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~~~~~ 227 (314)
| + ....||||||||||++++.. +++++.+.+. ..+.++|||+||.+|.++|..||.+||++.+..+...
T Consensus 172 ~---~-~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~~~~ 247 (334)
T PRK15171 172 P---G-LASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNYELK 247 (334)
T ss_pred c---c-ccccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchhHHHH
Confidence 1 1 12369999999999999554 4555555543 2467899999999999999999999999865433211
Q ss_pred CC---CCCCCeEEEEeeCCCCCCCCcCCCCCCCChhhhHHHHHHHHHHHhhcccc
Q 037698 228 EH---VETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSLD 279 (314)
Q Consensus 228 ~~---~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~ 279 (314)
+. ....+|+||||+| +.|||+... ..+..+.||.|+..++..
T Consensus 248 ~~~~~~~~~~p~IIHy~G-~~KPW~~~~---------~~~~~~~f~~~~~~spw~ 292 (334)
T PRK15171 248 DSVINPVNDETVFIHYIG-PTKPWHSWA---------DYPVSQYFLKAKEASPWK 292 (334)
T ss_pred hcccccccCCCEEEEECC-CCCCCCCCC---------CCchHHHHHHHHhcCCCC
Confidence 11 1246899999999 899998543 146789999999986654
No 6
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=1.6e-36 Score=271.12 Aligned_cols=219 Identities=23% Similarity=0.372 Sum_probs=158.5
Q ss_pred eeeCcccHHHHHHHHHHHHhcCCC--CcEEEEECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhhh---hhcccc
Q 037698 11 LAGNGDYVKGVVGLVKGLRKAKSA--YPLAVAVLPDVPADHRKILVSQ----GCIVREIQPVYPPENQTQF---AMAYYV 81 (314)
Q Consensus 11 l~~d~~Yl~~~~vl~~SL~~~~~~--~~ivvlv~~~ls~~~~~~L~~~----~~~v~~i~~i~~~~~~~~~---~~~~~~ 81 (314)
+++|++|+.+++|++.||+++++. ++++ +++++++++.++.|++. +..+..+ .++.+. .... ...++.
T Consensus 5 ~~~d~~y~~~~~~~l~Sl~~~~~~~~~~~~-il~~~is~~~~~~L~~~~~~~~~~i~~~-~i~~~~-~~~~~~~~~~~~~ 81 (248)
T cd04194 5 FAIDDNYAPYLAVTIKSILANNSKRDYDFY-ILNDDISEENKKKLKELLKKYNSSIEFI-KIDNDD-FKFFPATTDHISY 81 (248)
T ss_pred EEecHhhHHHHHHHHHHHHhcCCCCceEEE-EEeCCCCHHHHHHHHHHHHhcCCeEEEE-EcCHHH-HhcCCcccccccH
Confidence 568999999999999999999884 4455 44678999999999886 3333322 222211 1111 122346
Q ss_pred cccchhhhccccc-cceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCCCCCCcccccccccCCCCCCCCCCC
Q 037698 82 INYSKLRIWEFVE-YAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASM 158 (314)
Q Consensus 82 ~~y~KL~i~~l~~-ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~ 158 (314)
.+|+||+++++++ ++||||||+|++|++||++||+++ +..+||++|+....... .. . . ..
T Consensus 82 ~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~----~~-~-------~-----~~ 144 (248)
T cd04194 82 ATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKK----RK-R-------R-----LG 144 (248)
T ss_pred HHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHH----HH-h-------h-----cC
Confidence 7899999999875 999999999999999999999984 55788998864321000 00 0 0 01
Q ss_pred CCCCCCcccceEEEEecCHHH----HHHHHHHHhcCC-CCCCCchhHHHHHHccCceecCCcccccccccccCCC-----
Q 037698 159 GSPPPKYFNAGMFVYEPNLLT----YSHLLETLKVTP-PSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPE----- 228 (314)
Q Consensus 159 g~~~~~yfNsGvmli~~~~~~----~~~ll~~~~~~~-~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~~~~~~----- 228 (314)
+.....||||||||+|+++.. .+++++.+.+.. .+.++||++||.+|.++|..||.+||++.........
T Consensus 145 ~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~~ 224 (248)
T cd04194 145 GYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKSKEE 224 (248)
T ss_pred CCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhccchhH
Confidence 112357999999999999854 556666666543 4678999999999999999999999999875432211
Q ss_pred ---CCCCCCeEEEEeeCCCCCCCCc
Q 037698 229 ---HVETEKVKVVHYCASGSKPWRY 250 (314)
Q Consensus 229 ---~~~~~~~~IiHf~g~~~KPW~~ 250 (314)
.+..++++||||+| ..|||+.
T Consensus 225 ~~~~~~~~~~~iiHf~g-~~KPW~~ 248 (248)
T cd04194 225 QELEEARKNPVIIHYTG-SDKPWNK 248 (248)
T ss_pred HHHHHHhcCCEEEEeCC-CCCCCCC
Confidence 12367999999999 7999973
No 7
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=1.1e-34 Score=262.21 Aligned_cols=243 Identities=19% Similarity=0.244 Sum_probs=158.8
Q ss_pred eEEEEEeeeCcccHHHHHHHHHHHHhcCCC-CcEEEEECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhhh---h
Q 037698 5 RAYVTFLAGNGDYVKGVVGLVKGLRKAKSA-YPLAVAVLPDVPADHRKILVSQ----GCIVREIQPVYPPENQTQF---A 76 (314)
Q Consensus 5 ~A~vT~l~~d~~Yl~~~~vl~~SL~~~~~~-~~ivvlv~~~ls~~~~~~L~~~----~~~v~~i~~i~~~~~~~~~---~ 76 (314)
.|+| +++ .+|++++.|+++||..++.. +.++ +++++++++.++.|.+. ++++..+.. .+....+ .
T Consensus 3 ~~iv--~~~-~~y~~~~~~~i~Sil~n~~~~~~fh-ii~d~~s~~~~~~l~~~~~~~~~~i~f~~i---~~~~~~~~~~~ 75 (280)
T cd06431 3 VAIV--CAG-YNASRDVVTLVKSVLFYRRNPLHFH-LITDEIARRILATLFQTWMVPAVEVSFYNA---EELKSRVSWIP 75 (280)
T ss_pred EEEE--Ecc-CCcHHHHHHHHHHHHHcCCCCEEEE-EEECCcCHHHHHHHHHhccccCcEEEEEEh---HHhhhhhccCc
Confidence 3455 455 89999999999999998642 3444 56789999998888753 334332221 1000111 1
Q ss_pred h-ccccc-ccchhhhccccc--cceEEEEecCeeeccCchhhhcC----CCC-ceecccchhcccCCCCCCccccccccc
Q 037698 77 M-AYYVI-NYSKLRIWEFVE--YAKMIYLDGDIQVFENIDHLFEL----PNG-YLYAAMDCFCEKTWSNSPQYKIGYCQQ 147 (314)
Q Consensus 77 ~-~~~~~-~y~KL~i~~l~~--ydrvlYLD~D~lv~~dideLf~~----~~~-~iaAv~d~~~~~~~~~~~~~~~~~~~~ 147 (314)
. .++.. +|.||+++++++ ++||||||+|+||++||++||++ .+. .+||+.+.. . + ......
T Consensus 76 ~~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~-~--~------~~~~~~- 145 (280)
T cd06431 76 NKHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQS-D--W------YLGNLW- 145 (280)
T ss_pred ccchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccch-h--h------hhhhhh-
Confidence 1 12222 568999999764 99999999999999999999986 233 344444321 0 0 000000
Q ss_pred CCCCCCCCCCCCCCCCCcccceEEEEecCHHHHHHHHHH----Hhc----CCCCCCCchhHHHHHHccC---ceecCCcc
Q 037698 148 CPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTYSHLLET----LKV----TPPSSFAEQDFLNNFFRNI---YKPISHTY 216 (314)
Q Consensus 148 ~p~~~~~p~~~g~~~~~yfNsGvmli~~~~~~~~~ll~~----~~~----~~~~~~~DQdiLN~~f~~~---~~~Lp~~y 216 (314)
.....|+ .. ..||||||||||++++..+++.+. ..+ .....++|||+||.+|.++ +..||.+|
T Consensus 146 -~~~~~~~-~~----~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~w 219 (280)
T cd06431 146 -KNHRPWP-AL----GRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAW 219 (280)
T ss_pred -hccCCCc-cc----ccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCcc
Confidence 0001111 11 259999999999999655444333 222 2346789999999999999 88999999
Q ss_pred cccccccccCCCCC-CCCCeEEEEeeCCCCCCCCcCCCCCCCChhhhHHHHHHHHHHHhhcccc
Q 037698 217 NFVLAMLWRHPEHV-ETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSLD 279 (314)
Q Consensus 217 N~~~~~~~~~~~~~-~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~ 279 (314)
|++.+......+.+ ...+|+||||+| +.|||..... ...+++.|-.|.+..-..
T Consensus 220 N~~~~~~~~~~~~~~~~~~p~IIHf~g-~~KPW~~~~~--------~~~~~~~~~~~~~~~~~~ 274 (280)
T cd06431 220 NVQLSDHTRSEQCYRDVSDLKVIHWNS-PKKLRVKNKH--------VEFFRNLYLTFLEYDGNL 274 (280)
T ss_pred ccccCccchHhHhhcCcCCCEEEEeCC-CCCCCCcCCC--------ChHHHHHHHHHHhcCchh
Confidence 99975322111112 256899999999 8999987642 268999999998765433
No 8
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.3e-34 Score=264.03 Aligned_cols=222 Identities=20% Similarity=0.304 Sum_probs=161.9
Q ss_pred eeeCcccHHHHHHHHHHHHhcCC--CCcEEEEECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhhh---hhcccc
Q 037698 11 LAGNGDYVKGVVGLVKGLRKAKS--AYPLAVAVLPDVPADHRKILVSQ----GCIVREIQPVYPPENQTQF---AMAYYV 81 (314)
Q Consensus 11 l~~d~~Yl~~~~vl~~SL~~~~~--~~~ivvlv~~~ls~~~~~~L~~~----~~~v~~i~~i~~~~~~~~~---~~~~~~ 81 (314)
+++|.+|+.|++|+++||+.|+. .+.++|++ +++++|+.++|++. +..+. +..++... ...+ ...++.
T Consensus 7 ~a~D~nY~~~~gvsI~SiL~~n~~~~~~fhil~-~~i~~e~~~~l~~~~~~f~~~i~-~~~id~~~-~~~~~~~~~~~s~ 83 (325)
T COG1442 7 FAFDKNYLIPAGVSIYSLLEHNRKIFYKFHILV-DGLNEEDKKKLNETAEPFKSFIV-LEVIDIEP-FLDYPPFTKRFSK 83 (325)
T ss_pred EEcccccchhHHHHHHHHHHhCccccEEEEEEe-cCCCHHHHHHHHHHHHhhcccee-eEEEechh-hhcccccccchHH
Confidence 66899999999999999999988 67778665 89999998888763 33222 22222211 0111 123446
Q ss_pred cccchhhhcccc-ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCCCCCCcccccccccCCCCCCCCCCC
Q 037698 82 INYSKLRIWEFV-EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASM 158 (314)
Q Consensus 82 ~~y~KL~i~~l~-~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~ 158 (314)
.+|.|++++++. ++||+||||+|+||+++|++||+++ +.++|||.|....... +.. .+. ..
T Consensus 84 ~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~--------~~~----~~~----~~ 147 (325)
T COG1442 84 MVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMK--------EGA----LRL----EK 147 (325)
T ss_pred HHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhh--------hhh----hHh----hh
Confidence 789999999986 6899999999999999999999984 5689999986432100 000 000 11
Q ss_pred CCCCCCcccceEEEEecCHHHH----HHHHHHHhcC-CCCCCCchhHHHHHHccCceecCCcccccccccccCCC---CC
Q 037698 159 GSPPPKYFNAGMFVYEPNLLTY----SHLLETLKVT-PPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPE---HV 230 (314)
Q Consensus 159 g~~~~~yfNsGvmli~~~~~~~----~~ll~~~~~~-~~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~~~~~~---~~ 230 (314)
+.....|||||||++|++.+.. +++++.+... +.+.++|||+||.+|+++|..||.+||++......... .-
T Consensus 148 ~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~~~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~~~~~~~~~~~~ 227 (325)
T COG1442 148 GDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKENDLLYPDQDILNMIFEDRVLELPIRYNAIPYIDSQLKDKYIYP 227 (325)
T ss_pred cccccccCccceeeehHHHHHHhhhHHHHHHHHhccccccCCccccHHHHHHHhhhhccCcccceeehhhhccchhhhcc
Confidence 1223589999999999999654 4555555433 45788999999999999999999999999865433222 22
Q ss_pred CCCCeEEEEeeCCCCCCCCcCC
Q 037698 231 ETEKVKVVHYCASGSKPWRYTG 252 (314)
Q Consensus 231 ~~~~~~IiHf~g~~~KPW~~~~ 252 (314)
...++.|+||+| +.|||+..+
T Consensus 228 ~~~~~~iiHy~g-~~KPW~~~~ 248 (325)
T COG1442 228 FGDDPVILHYAG-PTKPWHSDS 248 (325)
T ss_pred CCCCceEEEecC-CCCCCcCcc
Confidence 367999999999 789999876
No 9
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=2.5e-35 Score=262.06 Aligned_cols=226 Identities=26% Similarity=0.429 Sum_probs=150.0
Q ss_pred EeeeCcccHHHHHHHHHHHHhcCCC-CcE-EEEECCCCCHHHHHHHHHcCCEEEEecccCCCCch--------hhhhhcc
Q 037698 10 FLAGNGDYVKGVVGLVKGLRKAKSA-YPL-AVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQ--------TQFAMAY 79 (314)
Q Consensus 10 ~l~~d~~Yl~~~~vl~~SL~~~~~~-~~i-vvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~--------~~~~~~~ 79 (314)
++++|.+|+.+++|+++||++++++ ..+ +++++++++++.++.|++.+..+..+..+..+... .......
T Consensus 3 ~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PF01501_consen 3 VLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRHF 82 (250)
T ss_dssp EEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTCG
T ss_pred EEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhcccccccc
Confidence 3668999999999999999999885 444 55678899999999998876654322222111110 0111234
Q ss_pred cccccchhhhccc-cccceEEEEecCeeeccCchhhhcCC--CCceecccchhccc-CCCCCCcccccccccCCCCCCCC
Q 037698 80 YVINYSKLRIWEF-VEYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEK-TWSNSPQYKIGYCQQCPEKVKWP 155 (314)
Q Consensus 80 ~~~~y~KL~i~~l-~~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~-~~~~~~~~~~~~~~~~p~~~~~p 155 (314)
...+|.||+++++ .+||||||||+|+||++||++||+++ +..+||+.+..... .....+. .
T Consensus 83 ~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~---~------------ 147 (250)
T PF01501_consen 83 SPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPF---S------------ 147 (250)
T ss_dssp GGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSS---E------------
T ss_pred cHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccch---h------------
Confidence 5678999999998 79999999999999999999999973 45688887721110 0000000 0
Q ss_pred CCCCCCCCCcccceEEEEecCHHHHHHHHHHH----hcCC-CCCCCchhHHHHHHccCceecCCccccccccc-ccCCCC
Q 037698 156 ASMGSPPPKYFNAGMFVYEPNLLTYSHLLETL----KVTP-PSSFAEQDFLNNFFRNIYKPISHTYNFVLAML-WRHPEH 229 (314)
Q Consensus 156 ~~~g~~~~~yfNsGvmli~~~~~~~~~ll~~~----~~~~-~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~-~~~~~~ 229 (314)
.........|||||||+++++....+.+.+.+ +... ...++||++||.+|.+++..||.+||++.... +.....
T Consensus 148 ~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~~~~~~~~ 227 (250)
T PF01501_consen 148 ERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYGNIKPLPCRYNCQPSWYNQSDDYF 227 (250)
T ss_dssp EECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHHHHTHHHH
T ss_pred hcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccceeEEECchhccccccccccchhh
Confidence 01111235899999999999997766665554 3332 46789999999999999999999999998643 110000
Q ss_pred -CCCCCeEEEEeeCCCCCCCCcC
Q 037698 230 -VETEKVKVVHYCASGSKPWRYT 251 (314)
Q Consensus 230 -~~~~~~~IiHf~g~~~KPW~~~ 251 (314)
....+++||||+| ..|||...
T Consensus 228 ~~~~~~~~iiHy~g-~~KPW~~~ 249 (250)
T PF01501_consen 228 NPILEDAKIIHYSG-PPKPWKST 249 (250)
T ss_dssp HHHGCC-SEEE--S-SS-TTSTT
T ss_pred HhhcCCeEEEEeCC-CCcCCCCC
Confidence 1268999999999 89999874
No 10
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=3.8e-34 Score=255.31 Aligned_cols=213 Identities=13% Similarity=0.176 Sum_probs=146.9
Q ss_pred eeeCcccHHHHHHHHHHHHhcCCC-CcE-EEEECCCCCHHHHHHHHHc----CCEEEEecccCCCC--ch-h--------
Q 037698 11 LAGNGDYVKGVVGLVKGLRKAKSA-YPL-AVAVLPDVPADHRKILVSQ----GCIVREIQPVYPPE--NQ-T-------- 73 (314)
Q Consensus 11 l~~d~~Yl~~~~vl~~SL~~~~~~-~~i-vvlv~~~ls~~~~~~L~~~----~~~v~~i~~i~~~~--~~-~-------- 73 (314)
+++| +|+. ++|++.|+..++++ .++ +.+++++++.+.++.+.+. +..+ .+..++... .. .
T Consensus 5 ~~~D-n~l~-~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i-~~~~i~~~~~~~~~~~~~~~~~~ 81 (257)
T cd06429 5 IFSD-NRLA-AAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATV-KVLNFDDFKLLGKVKVDSLMQLE 81 (257)
T ss_pred EEec-chhH-HHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceE-EEEEeCcHHhhcccccchhhhhh
Confidence 3467 9995 55666666666654 554 3477899998887777653 2232 222221100 00 0
Q ss_pred --------hhhh--cccccccchhhhcccc-ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCCCCCCcc
Q 037698 74 --------QFAM--AYYVINYSKLRIWEFV-EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTWSNSPQY 140 (314)
Q Consensus 74 --------~~~~--~~~~~~y~KL~i~~l~-~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~ 140 (314)
+... ..+..+|+||++|+++ +++||||||+|+||++||++||+++ +..+|||+
T Consensus 82 ~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~-------------- 147 (257)
T cd06429 82 SEADTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVE-------------- 147 (257)
T ss_pred ccccccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEh--------------
Confidence 0001 1245789999999976 5899999999999999999999984 44555552
Q ss_pred cccccccCCCCCCCCCCCCCCCCCcccceEEEEecCHHHHH----HHHHHHhcCC-C----CCCCchhHHHHHHccCcee
Q 037698 141 KIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTYS----HLLETLKVTP-P----SSFAEQDFLNNFFRNIYKP 211 (314)
Q Consensus 141 ~~~~~~~~p~~~~~p~~~g~~~~~yfNsGvmli~~~~~~~~----~ll~~~~~~~-~----~~~~DQdiLN~~f~~~~~~ 211 (314)
+||||||||||++++..+ +++++++... . ...+||++||.+|.+++..
T Consensus 148 -----------------------dyfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~ 204 (257)
T cd06429 148 -----------------------TSWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSP 204 (257)
T ss_pred -----------------------hhcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEE
Confidence 389999999999985544 4455554332 1 3458999999999999999
Q ss_pred cCCcccccccccccCC-CCCCCCCeEEEEeeCCCCCCCCcCCCCCCCChhhhHHHHHHHHHHHh
Q 037698 212 ISHTYNFVLAMLWRHP-EHVETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYE 274 (314)
Q Consensus 212 Lp~~yN~~~~~~~~~~-~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~ 274 (314)
||.+||++. ..+... ......+++||||+| ..|||+..+ ..++++.||+|+.
T Consensus 205 L~~~wN~~~-l~~~~~~~~~~~~~~~IIHy~G-~~KPW~~~~---------~~~~~~~w~~yl~ 257 (257)
T cd06429 205 LDPSWHVRG-LGYNYGIRPQDIKAAAVLHFNG-NMKPWLRTA---------IPSYKELWEKYLS 257 (257)
T ss_pred CChHHcccC-CcccccccccccCCcEEEEECC-CCCCcCCCC---------CChHHHHHHHHhC
Confidence 999999973 333211 111256899999999 899998764 2578999999963
No 11
>PLN02523 galacturonosyltransferase
Probab=99.96 E-value=2.3e-28 Score=231.56 Aligned_cols=240 Identities=16% Similarity=0.273 Sum_probs=155.8
Q ss_pred HHHHHHHHHHHHhc-CCCCcE-EEEECCCCCHHHHHHHHHc----CC--EEEEecc---cCC---C-----Cch--h---
Q 037698 18 VKGVVGLVKGLRKA-KSAYPL-AVAVLPDVPADHRKILVSQ----GC--IVREIQP---VYP---P-----ENQ--T--- 73 (314)
Q Consensus 18 l~~~~vl~~SL~~~-~~~~~i-vvlv~~~ls~~~~~~L~~~----~~--~v~~i~~---i~~---~-----~~~--~--- 73 (314)
+.++.|.+.|+..| ++...+ +.++|++++...++.+-.. +. ++..|+. .+. + +.. .
T Consensus 258 vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~~~~pvlk~l~s~~~~~~~ 337 (559)
T PLN02523 258 VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNSSYVPVLRQLESANLQKFY 337 (559)
T ss_pred chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcccccchHHHhhhhhhhhhhh
Confidence 88999999999988 343333 4478999998776665432 22 3344442 110 0 000 0
Q ss_pred ---------------hhhhc--ccccccchhhhcccc-ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccC
Q 037698 74 ---------------QFAMA--YYVINYSKLRIWEFV-EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKT 133 (314)
Q Consensus 74 ---------------~~~~~--~~~~~y~KL~i~~l~-~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~ 133 (314)
.+..+ .+..+|.||+||+++ +++||||||+|+||++||++||+++ ++.+|||.||....
T Consensus 338 f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~aAVeDc~~~~- 416 (559)
T PLN02523 338 FENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSF- 416 (559)
T ss_pred ccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEEEehhhhhHH-
Confidence 00000 134678999999976 5999999999999999999999984 56788998874210
Q ss_pred CCCCCcccccccccCCCCCCCCCCCCCCCCCcccceEEEEecCHHHHHHHHHHHh----cCCCCCCCchhHHH---HHHc
Q 037698 134 WSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLTYSHLLETLK----VTPPSSFAEQDFLN---NFFR 206 (314)
Q Consensus 134 ~~~~~~~~~~~~~~~p~~~~~p~~~g~~~~~yfNsGvmli~~~~~~~~~ll~~~~----~~~~~~~~DQdiLN---~~f~ 206 (314)
.. +........| .+. .... ...++||+||||||++++..+++.+.+. .+....+.|||.|| .+|.
T Consensus 417 -~r---~~~~ln~s~p-~i~--~yFN-s~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~DqdaLpp~LivF~ 488 (559)
T PLN02523 417 -HR---YAQYLNFSHP-LIK--EKFN-PKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLGTLPPGLITFY 488 (559)
T ss_pred -HH---HHHhhcccch-hhh--hCcC-CCcccccCCcEEEeHHHHHHhchHHHHHHHHHhccccccccccccchHHHHhc
Confidence 00 0000000000 000 0000 1246777799999999987766665432 22345789999995 8999
Q ss_pred cCceecCCcccccccccccCC-CCCCCCCeEEEEeeCCCCCCCCcCCCCCCCChhhhHHHHHHHHHHHhhcc
Q 037698 207 NIYKPISHTYNFVLAMLWRHP-EHVETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKS 277 (314)
Q Consensus 207 ~~~~~Lp~~yN~~~~~~~~~~-~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~ 277 (314)
++|..|+.+||+... .+... ..-..++++||||+| ..|||...+ ...+++.||.|...+-
T Consensus 489 gri~~LD~rWNvlgl-Gy~~~i~~~~i~~paIIHYnG-~~KPWle~~---------i~~yr~~W~kYl~~~~ 549 (559)
T PLN02523 489 STTKPLDKSWHVLGL-GYNPSISMDEIRNAAVIHFNG-NMKPWLDIA---------MNQFKPLWTKYVDYDM 549 (559)
T ss_pred CceEecCchhhccCC-ccCCCccccccCCCEEEEECC-CCCccccCC---------CCcchHHHHHHHccCC
Confidence 999999999998753 22211 111257899999999 899998765 2567899999977543
No 12
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.95 E-value=8.1e-28 Score=217.01 Aligned_cols=218 Identities=12% Similarity=0.173 Sum_probs=140.9
Q ss_pred EEEeeeCcccHHHHHHHHHHHHhcCC-CCcEEEEECCCCCHHHHHHHHHc---CCEEE--EecccCCCCc-hhhhhhccc
Q 037698 8 VTFLAGNGDYVKGVVGLVKGLRKAKS-AYPLAVAVLPDVPADHRKILVSQ---GCIVR--EIQPVYPPEN-QTQFAMAYY 80 (314)
Q Consensus 8 vT~l~~d~~Yl~~~~vl~~SL~~~~~-~~~ivvlv~~~ls~~~~~~L~~~---~~~v~--~i~~i~~~~~-~~~~~~~~~ 80 (314)
++++++++. +..+.|+++|+..++. ...++++..+.++++.+++|++. +.+.+ .+.++..|.. ...++.-..
T Consensus 3 ~~vv~~g~~-~~~~~~~lkSil~~n~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~ws~l~~ 81 (304)
T cd06430 3 LAVVACGER-LEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLFK 81 (304)
T ss_pred EEEEEcCCc-HHHHHHHHHHHHHhCCCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhhhhccc
Confidence 344556555 8999999999988763 33455554444788777777765 22222 4444444422 122322112
Q ss_pred ccccchhhhcccc-ccceEEEEecCeeeccCchhhhcC--C--CCceecc-cchhcccCCCCCCcccccccccCCCCCCC
Q 037698 81 VINYSKLRIWEFV-EYAKMIYLDGDIQVFENIDHLFEL--P--NGYLYAA-MDCFCEKTWSNSPQYKIGYCQQCPEKVKW 154 (314)
Q Consensus 81 ~~~y~KL~i~~l~-~ydrvlYLD~D~lv~~dideLf~~--~--~~~iaAv-~d~~~~~~~~~~~~~~~~~~~~~p~~~~~ 154 (314)
..+|.||++++++ ++|||||||+|+||++||++||++ + +..+||+ ++... . ..+|
T Consensus 82 ~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~-~------------------~~~~ 142 (304)
T cd06430 82 PCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEE-P------------------NIGW 142 (304)
T ss_pred HHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccc-c------------------chhh
Confidence 3689999999976 689999999999999999999987 3 3345554 44210 0 0011
Q ss_pred CC---CCCCCCCCcccceEEEEecCHHHH---------------HHHHHHHhcCC-CCCCCchhHHHHHHccC---ceec
Q 037698 155 PA---SMGSPPPKYFNAGMFVYEPNLLTY---------------SHLLETLKVTP-PSSFAEQDFLNNFFRNI---YKPI 212 (314)
Q Consensus 155 p~---~~g~~~~~yfNsGvmli~~~~~~~---------------~~ll~~~~~~~-~~~~~DQdiLN~~f~~~---~~~L 212 (314)
.. ........+||||||+||++++.. +++++.++++. .+.++|||+||.+|.++ ++.|
T Consensus 143 ~~~~~~~~~~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~~p~~~~~L 222 (304)
T cd06430 143 YNRFARHPYYGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVF 222 (304)
T ss_pred hhhhcccCcccccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcCCCCeEEEc
Confidence 00 001111257999999999998554 34555665553 57789999999999997 8999
Q ss_pred CCccccccccc-cc-CCCCCCCCCeEEEEeeCCCCC
Q 037698 213 SHTYNFVLAML-WR-HPEHVETEKVKVVHYCASGSK 246 (314)
Q Consensus 213 p~~yN~~~~~~-~~-~~~~~~~~~~~IiHf~g~~~K 246 (314)
|.+||++.... |. ..+.-+...++|||+.+ +.|
T Consensus 223 p~~wN~~~d~~~y~~~~~~~~~~~~~~~H~n~-~~~ 257 (304)
T cd06430 223 PCHWNYRPDHCMYGSNCKAAEEEGVFILHGNR-GVY 257 (304)
T ss_pred CccccCCccceeecccccccccccceEEEcCC-CCC
Confidence 99999877421 11 11111246899999997 445
No 13
>PLN02718 Probable galacturonosyltransferase
Probab=99.95 E-value=3.1e-28 Score=233.25 Aligned_cols=242 Identities=14% Similarity=0.209 Sum_probs=157.8
Q ss_pred CcccHHHHHHHHHHHHhc--CCCCcE-EEEECCCCCHHHHHHHHHcC----CE--EEEecccC-CCCc----hhhhhh--
Q 037698 14 NGDYVKGVVGLVKGLRKA--KSAYPL-AVAVLPDVPADHRKILVSQG----CI--VREIQPVY-PPEN----QTQFAM-- 77 (314)
Q Consensus 14 d~~Yl~~~~vl~~SL~~~--~~~~~i-vvlv~~~ls~~~~~~L~~~~----~~--v~~i~~i~-~~~~----~~~~~~-- 77 (314)
.++|+ ++.|++.|+..+ ++. .+ +++++++++.+.++.+.... +. +..++... .+.. ...+..
T Consensus 320 sDNvl-aasVvInSil~Ns~np~-~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~~~~~~lk~l~s~~ 397 (603)
T PLN02718 320 SDNVL-ACSVVVNSTISSSKEPE-KIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLPADYNSLLMKQNSHD 397 (603)
T ss_pred cCCce-eEEEEhhhhhhccCCCC-cEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhccccccchhhhhhccccc
Confidence 35574 899999999987 343 33 34778999998888765542 22 22332111 0110 001110
Q ss_pred --cccccccchhhhcccc-ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccC-CCCCCcccccccccCCCC
Q 037698 78 --AYYVINYSKLRIWEFV-EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKT-WSNSPQYKIGYCQQCPEK 151 (314)
Q Consensus 78 --~~~~~~y~KL~i~~l~-~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~-~~~~~~~~~~~~~~~p~~ 151 (314)
..+..+|+||++|+++ +++||||||+|+||++||++||+++ +..+|||.||..... ......+ ++. ..|.
T Consensus 398 ~~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~-lnf--s~p~- 473 (603)
T PLN02718 398 PRYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTF-INF--SDPW- 473 (603)
T ss_pred cccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhh-hhc--cchh-
Confidence 1235689999999976 5899999999999999999999984 567888988743210 0000000 000 0000
Q ss_pred CCCCCCCCCCCCCcccceEEEEecCHHHHHHH----HHHHhcCCCCCCCchhHHH---HHHccCceecCCcccccccccc
Q 037698 152 VKWPASMGSPPPKYFNAGMFVYEPNLLTYSHL----LETLKVTPPSSFAEQDFLN---NFFRNIYKPISHTYNFVLAMLW 224 (314)
Q Consensus 152 ~~~p~~~g~~~~~yfNsGvmli~~~~~~~~~l----l~~~~~~~~~~~~DQdiLN---~~f~~~~~~Lp~~yN~~~~~~~ 224 (314)
+ .... .+..+|||+||||||++++..+++ .+++..+....+.|||.|| .+|.+++..||.+||+.. +.+
T Consensus 474 i--~~~f-n~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~LD~rWNv~g-LG~ 549 (603)
T PLN02718 474 V--AKKF-DPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVALDKRWHVLG-LGH 549 (603)
T ss_pred h--hccc-CCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCceeecChHHhccC-ccc
Confidence 0 0001 124589999999999999765544 4455444334678999997 899999999999999875 333
Q ss_pred cCC-CCCCCCCeEEEEeeCCCCCCCCcCCCCCCCChhhhHHHHHHHHHHHhh
Q 037698 225 RHP-EHVETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYED 275 (314)
Q Consensus 225 ~~~-~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 275 (314)
... ......+++||||+| ..|||...+ ...|+++|-.|...
T Consensus 550 ~~~i~~~~i~~aaIIHYnG-~~KPWle~~---------i~~yr~~W~k~v~~ 591 (603)
T PLN02718 550 ESGVGASDIEQAAVIHYDG-VMKPWLDIG---------IGKYKRYWNIHVPY 591 (603)
T ss_pred cccccccccCCCEEEEECC-CCCccccCC---------hhhHHHHHHhhcCC
Confidence 211 111367899999999 899999986 35788888887553
No 14
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.95 E-value=3.3e-27 Score=210.32 Aligned_cols=214 Identities=14% Similarity=0.200 Sum_probs=139.7
Q ss_pred eeCcccHHHHHHHHHHHHhcCC-CCcEEEEECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhhhhh-cccccccc
Q 037698 12 AGNGDYVKGVVGLVKGLRKAKS-AYPLAVAVLPDVPADHRKILVSQ----GCIVREIQPVYPPENQTQFAM-AYYVINYS 85 (314)
Q Consensus 12 ~~d~~Yl~~~~vl~~SL~~~~~-~~~ivvlv~~~ls~~~~~~L~~~----~~~v~~i~~i~~~~~~~~~~~-~~~~~~y~ 85 (314)
++++.|++++.|++.||+.|+. .+.+++ +++++|++.++.|++. +..+..+. ++.+........ .+...+|.
T Consensus 7 ~~~~~y~~~~~v~l~Sll~nn~~~~~fyi-l~~~is~e~~~~l~~~~~~~~~~i~~i~-i~~~~~~~~~~~~~~~~~~y~ 84 (248)
T cd06432 7 ASGHLYERFLRIMMLSVMKNTKSPVKFWF-IKNFLSPQFKEFLPEMAKEYGFEYELVT-YKWPRWLHKQTEKQRIIWGYK 84 (248)
T ss_pred cCcHHHHHHHHHHHHHHHHcCCCCEEEEE-EeCCCCHHHHHHHHHHHHHhCCceEEEE-ecChhhhhcccccchhHHHHH
Confidence 6789999999999999999864 345554 4589999998888763 44332222 121111010100 11123577
Q ss_pred hhhhcccc--ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCCCCCCcccccccccCCCCCCCCCCCCCC
Q 037698 86 KLRIWEFV--EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSP 161 (314)
Q Consensus 86 KL~i~~l~--~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g~~ 161 (314)
||.+..++ +++||||||+|+||.+||++||+++ +..+|||.++...........+..+. |...+ .
T Consensus 85 rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~---------~~~~l--~ 153 (248)
T cd06432 85 ILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGY---------WKSHL--R 153 (248)
T ss_pred HHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhh---------hhhhc--C
Confidence 88888765 4899999999999999999999984 55788887742110000000000000 00011 1
Q ss_pred CCCcccceEEEEecCHHHHHHHHH----HH---hcC-CCCCCCchhHHHHHHccC-ceecCCcccccccccccCCCCCCC
Q 037698 162 PPKYFNAGMFVYEPNLLTYSHLLE----TL---KVT-PPSSFAEQDFLNNFFRNI-YKPISHTYNFVLAMLWRHPEHVET 232 (314)
Q Consensus 162 ~~~yfNsGvmli~~~~~~~~~ll~----~~---~~~-~~~~~~DQdiLN~~f~~~-~~~Lp~~yN~~~~~~~~~~~~~~~ 232 (314)
...||||||||||++++..+.+.+ .+ .++ ..+.++|||+||.++.+. +..||.+||++.. |+..+ ..
T Consensus 154 ~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~--~~~~~--~~ 229 (248)
T cd06432 154 GRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCET--WCSDE--SK 229 (248)
T ss_pred CCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHHH--Hhccc--cc
Confidence 236999999999999966555444 22 222 347789999999999886 9999999999754 43322 27
Q ss_pred CCeEEEEeeC
Q 037698 233 EKVKVVHYCA 242 (314)
Q Consensus 233 ~~~~IiHf~g 242 (314)
+.+++|||..
T Consensus 230 ~~~~~~~~~~ 239 (248)
T cd06432 230 KKAKTIDLCN 239 (248)
T ss_pred Cccceeeccc
Confidence 8999999976
No 15
>PLN02867 Probable galacturonosyltransferase
Probab=99.94 E-value=5.4e-27 Score=222.51 Aligned_cols=175 Identities=22% Similarity=0.375 Sum_probs=123.0
Q ss_pred ccccchhhhcccc-ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCC--CC-CCcccccccccCCCCCCC
Q 037698 81 VINYSKLRIWEFV-EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTW--SN-SPQYKIGYCQQCPEKVKW 154 (314)
Q Consensus 81 ~~~y~KL~i~~l~-~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~--~~-~~~~~~~~~~~~p~~~~~ 154 (314)
..+|+||++|+++ +++||||||+|+||++||++||+++ ++.+|||.|..|.... ++ +..|. .. ..| .+
T Consensus 330 ~lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~Yl-Nf--snp-~i-- 403 (535)
T PLN02867 330 LLNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYL-NF--SHP-LI-- 403 (535)
T ss_pred HHHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhc-cc--cch-hh--
Confidence 4679999999976 6899999999999999999999984 5679999876543210 00 00000 00 001 00
Q ss_pred CCCCCC-CCCCcccceEEEEecCHHHHHHHH----HHHhcCC--CCCCCchhHHHH---HHccCceecCCcccccccccc
Q 037698 155 PASMGS-PPPKYFNAGMFVYEPNLLTYSHLL----ETLKVTP--PSSFAEQDFLNN---FFRNIYKPISHTYNFVLAMLW 224 (314)
Q Consensus 155 p~~~g~-~~~~yfNsGvmli~~~~~~~~~ll----~~~~~~~--~~~~~DQdiLN~---~f~~~~~~Lp~~yN~~~~~~~ 224 (314)
..+. +...||||||||||++++..+++. ++++.+. ...+.|||.||. +|.++|..||.+||+. ++.+
T Consensus 404 --~~~~~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~-gLgy 480 (535)
T PLN02867 404 --SSNLDQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVA-GLGS 480 (535)
T ss_pred --hccCCCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhccc-CCCc
Confidence 0111 235799999999999997665554 4444432 256789999996 9999999999999994 4444
Q ss_pred cCCCCC-C-CCCeEEEEeeCCCCCCCCcCCCCCCCChhhhHHHHHHHHHHHh
Q 037698 225 RHPEHV-E-TEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYE 274 (314)
Q Consensus 225 ~~~~~~-~-~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~ 274 (314)
..+... + .++++||||+| ..|||+..+ ...+++.|-.|.+
T Consensus 481 ~~~~~~~~~i~~paIIHYnG-~~KPW~e~~---------~~~yR~~W~kyl~ 522 (535)
T PLN02867 481 RPPEVPREILESAAVLHFSG-PAKPWLEIG---------FPEVRSLWYRHVN 522 (535)
T ss_pred ccccchhhhcCCcEEEEECC-CCCcccccC---------CCchhHHHHHhcC
Confidence 322111 1 57899999999 899999876 3568899966654
No 16
>PLN02769 Probable galacturonosyltransferase
Probab=99.93 E-value=4.2e-26 Score=219.58 Aligned_cols=171 Identities=19% Similarity=0.260 Sum_probs=120.1
Q ss_pred ccccchhhhcccc-ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCCCCCCcccccccccCCCCCCCCCC
Q 037698 81 VINYSKLRIWEFV-EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPAS 157 (314)
Q Consensus 81 ~~~y~KL~i~~l~-~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~ 157 (314)
..+|+||+||+++ +.+||||||+|+||++||++||+++ ++.+|||.+|... ......| ++ ..+
T Consensus 437 ~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~r--l~~~~~y-l~-------~~~---- 502 (629)
T PLN02769 437 VFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVR--LGQLKNY-LG-------DTN---- 502 (629)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhh--hhhhhhh-hc-------ccC----
Confidence 4678899999976 5899999999999999999999984 5678999876321 0000000 00 000
Q ss_pred CCCCCCCcccceEEEEecCHHHHHHH----HHHHhcC-----CCCCCCchhHHHHHHccCceecCCcccccccccccCC-
Q 037698 158 MGSPPPKYFNAGMFVYEPNLLTYSHL----LETLKVT-----PPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHP- 227 (314)
Q Consensus 158 ~g~~~~~yfNsGvmli~~~~~~~~~l----l~~~~~~-----~~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~~~~~- 227 (314)
. .+..+|||+||||||++++..+++ ..+++.. ..+..++|+++|.+|.+++..||.+||++.. .+...
T Consensus 503 F-~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~v~~LD~rWNv~gL-G~~~~i 580 (629)
T PLN02769 503 F-DTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIYPLDDRWVLSGL-GHDYGI 580 (629)
T ss_pred C-CccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCeEEECCHHHccccc-cccccc
Confidence 0 123579999999999999655433 3333221 1244578888999999999999999998742 22111
Q ss_pred CCCCCCCeEEEEeeCCCCCCCCcCCCCCCCChhhhHHHHHHHHHHHhhcc
Q 037698 228 EHVETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKS 277 (314)
Q Consensus 228 ~~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~ 277 (314)
......+++||||+| ..|||...+ ...+++.||.|...+-
T Consensus 581 ~~~~i~~paIIHYnG-~~KPW~e~~---------i~~yr~~W~kYl~~~~ 620 (629)
T PLN02769 581 DEQAIKKAAVLHYNG-NMKPWLELG---------IPKYKKYWKRFLNRDD 620 (629)
T ss_pred cccccCCcEEEEECC-CCCCccCCC---------CChHHHHHHHHhccCC
Confidence 011267999999999 899999865 2568999999987543
No 17
>PLN02659 Probable galacturonosyltransferase
Probab=99.93 E-value=2e-26 Score=217.84 Aligned_cols=182 Identities=19% Similarity=0.282 Sum_probs=125.6
Q ss_pred ccccchhhhcccc-ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCCCCCCccccccc-ccCCCCCCCCC
Q 037698 81 VINYSKLRIWEFV-EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTWSNSPQYKIGYC-QQCPEKVKWPA 156 (314)
Q Consensus 81 ~~~y~KL~i~~l~-~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~-~~~p~~~~~p~ 156 (314)
..+|+||++|+++ +++||||||+|+||++||++||+++ ++.+|||.||.....+....++. .+. ...|... .
T Consensus 329 ~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~-~yL~~s~p~i~---~ 404 (534)
T PLN02659 329 VMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLK-SYLNFSHPLIA---K 404 (534)
T ss_pred HHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHH-Hhhcccchhhh---h
Confidence 4678999999976 6999999999999999999999984 56788998864211000000000 000 0001000 0
Q ss_pred CCCCCCCCcccceEEEEecCHHHH----HHHHHHHhcC--CCCCCCchhHH---HHHHccCceecCCcccccccccccCC
Q 037698 157 SMGSPPPKYFNAGMFVYEPNLLTY----SHLLETLKVT--PPSSFAEQDFL---NNFFRNIYKPISHTYNFVLAMLWRHP 227 (314)
Q Consensus 157 ~~g~~~~~yfNsGvmli~~~~~~~----~~ll~~~~~~--~~~~~~DQdiL---N~~f~~~~~~Lp~~yN~~~~~~~~~~ 227 (314)
..+ ....|||+||||||++++.. ++++++++++ ....+.|||+| |.+|.+++..||.+||+.. ..+...
T Consensus 405 yFn-~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~g-Lg~~~~ 482 (534)
T PLN02659 405 NFD-PNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLG-LGYQEN 482 (534)
T ss_pred ccC-ccccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecC-Cccccc
Confidence 111 13579999999999999654 4555556544 24667899999 5889999999999999853 333221
Q ss_pred C-CCCCCCeEEEEeeCCCCCCCCcCCCCCCCChhhhHHHHHHHHHHHhhccc
Q 037698 228 E-HVETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKSL 278 (314)
Q Consensus 228 ~-~~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~ 278 (314)
. .-..++++||||+| ..|||...+ ..+++..|-.|.+.+-.
T Consensus 483 ~~~~~i~~paIIHYnG-~~KPW~~~~---------~~~yr~~W~kYl~~s~~ 524 (534)
T PLN02659 483 TSLADAESAGVVHFNG-RAKPWLDIA---------FPQLRPLWAKYIDSSDK 524 (534)
T ss_pred ccccccCCcEEEEECC-CCCcccccc---------CCcchhHHHHHhccCCH
Confidence 1 11357999999999 899999876 36788999998876543
No 18
>PLN02870 Probable galacturonosyltransferase
Probab=99.92 E-value=9.9e-26 Score=213.06 Aligned_cols=177 Identities=19% Similarity=0.317 Sum_probs=121.5
Q ss_pred cccccchhhhcccc-ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCC---CCCCcccccccccCCCCCC
Q 037698 80 YVINYSKLRIWEFV-EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTW---SNSPQYKIGYCQQCPEKVK 153 (314)
Q Consensus 80 ~~~~y~KL~i~~l~-~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~---~~~~~~~~~~~~~~p~~~~ 153 (314)
+..+|+||++|+++ +.+||||||+|+||++||++||+++ ++.+|||.||.....+ .....|.- -.+|..
T Consensus 327 S~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfN---fs~p~i-- 401 (533)
T PLN02870 327 SLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFN---FSHPLI-- 401 (533)
T ss_pred CHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcc---cccchh--
Confidence 34678999999976 5999999999999999999999984 6678899886432110 00000000 000100
Q ss_pred CCCCCCC-CCCCcccceEEEEecCHHHHH----HHHHHHhcC--CCCCCCchhHH---HHHHccCceecCCccccccccc
Q 037698 154 WPASMGS-PPPKYFNAGMFVYEPNLLTYS----HLLETLKVT--PPSSFAEQDFL---NNFFRNIYKPISHTYNFVLAML 223 (314)
Q Consensus 154 ~p~~~g~-~~~~yfNsGvmli~~~~~~~~----~ll~~~~~~--~~~~~~DQdiL---N~~f~~~~~~Lp~~yN~~~~~~ 223 (314)
..+. +..+||||||||||++++..+ +++++++++ .+..+.|||+| |.+|.+++..||.+||+.. +.
T Consensus 402 ---~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~g-Lg 477 (533)
T PLN02870 402 ---AKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLG-LG 477 (533)
T ss_pred ---hcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCC-CC
Confidence 0111 235799999999999996544 445555443 24678999999 6899999999999999853 33
Q ss_pred ccCCCCC-CCCCeEEEEeeCCCCCCCCcCCCCCCCChhhhHHHHHHHHHHHhh
Q 037698 224 WRHPEHV-ETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYED 275 (314)
Q Consensus 224 ~~~~~~~-~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 275 (314)
+...... ..++++||||+| ..|||...+ ...++..|-.|.+.
T Consensus 478 y~~~~~~~~i~~aaIIHY~G-~~KPW~~~~---------~~~yr~~W~kYl~~ 520 (533)
T PLN02870 478 YQSKTNIESVKKAAVIHYNG-QSKPWLEIG---------FEHLRPFWTKYVNY 520 (533)
T ss_pred CcccccccccCCcEEEEECC-CCCCccccC---------ccchhHHHHHHHcc
Confidence 3222111 267899999999 899998765 24466666666543
No 19
>PLN02742 Probable galacturonosyltransferase
Probab=99.92 E-value=5.8e-25 Score=208.28 Aligned_cols=177 Identities=17% Similarity=0.280 Sum_probs=123.9
Q ss_pred ccccchhhhcccc-ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCCCCCCcccccccccCCCCCCCCCC
Q 037698 81 VINYSKLRIWEFV-EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPAS 157 (314)
Q Consensus 81 ~~~y~KL~i~~l~-~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~ 157 (314)
..+|.||++|+++ +.+||||||+|+||++||++||+++ +..+|||.||..+. ..+..+ +.. .+| +...
T Consensus 338 ~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f--~ry~~y-Lnf--S~p----~i~~ 408 (534)
T PLN02742 338 MLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETF--HRYHKY-LNF--SHP----LISS 408 (534)
T ss_pred HHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhh--hhhhhh-hcc--cch----hhhc
Confidence 4678999999976 5899999999999999999999984 56789999874221 000000 000 001 0001
Q ss_pred CCCCCCCcccceEEEEecCHHHHHHHHHHH----hcCCCCCCCchhHHHH---HHccCceecCCcccccccccccCC-CC
Q 037698 158 MGSPPPKYFNAGMFVYEPNLLTYSHLLETL----KVTPPSSFAEQDFLNN---FFRNIYKPISHTYNFVLAMLWRHP-EH 229 (314)
Q Consensus 158 ~g~~~~~yfNsGvmli~~~~~~~~~ll~~~----~~~~~~~~~DQdiLN~---~f~~~~~~Lp~~yN~~~~~~~~~~-~~ 229 (314)
...+..+|||+||||||++++..+++.+.+ +.+....+.|||.||. +|.+++..||.+||+.. +++... ..
T Consensus 409 ~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g~~~~LD~rWNv~g-LG~~~~v~~ 487 (534)
T PLN02742 409 HFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHVLG-LGYDTNIDP 487 (534)
T ss_pred cCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcCcceecChhheecc-cccccccch
Confidence 111245899999999999997766554432 2234456789999996 59999999999999864 233211 11
Q ss_pred CCCCCeEEEEeeCCCCCCCCcCCCCCCCChhhhHHHHHHHHHHHhhcc
Q 037698 230 VETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDKS 277 (314)
Q Consensus 230 ~~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~ 277 (314)
-..+++.||||+| ..|||...+ ...+.++|+.|....-
T Consensus 488 ~~i~~aaILHynG-~~KPWl~~~---------i~~yr~~W~kYl~~s~ 525 (534)
T PLN02742 488 RLIESAAVLHFNG-NMKPWLKLA---------IERYKPLWERYVNYSH 525 (534)
T ss_pred hhccCCeEEEECC-CCCcccccC---------CcccchHHHHHHccCC
Confidence 1367999999999 899999886 2457889999977543
No 20
>PLN02829 Probable galacturonosyltransferase
Probab=99.91 E-value=5.7e-25 Score=210.49 Aligned_cols=175 Identities=18% Similarity=0.328 Sum_probs=122.4
Q ss_pred ccccchhhhcccc-ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCCCCCCcccccccccCCCCCCCCCC
Q 037698 81 VINYSKLRIWEFV-EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPAS 157 (314)
Q Consensus 81 ~~~y~KL~i~~l~-~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~ 157 (314)
..+|+||++|+++ +++||||||+|+||++||++||+++ ++.+|||.+|... ...+..+ ... ..|. +. ..
T Consensus 442 ~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~--f~r~~~~-l~f--s~p~-i~--~~ 513 (639)
T PLN02829 442 ILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGES--FHRFDRY-LNF--SNPL-IS--KN 513 (639)
T ss_pred HHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhh--hhhhhhh-hhc--cchH-hh--hc
Confidence 4678999999976 5899999999999999999999984 5678889886321 0000000 000 0010 00 00
Q ss_pred CCCCCCCcccceEEEEecCHHHHHHHH----HHHhcCCCCCCCchhHHHHH---HccCceecCCcccccccccccCCCCC
Q 037698 158 MGSPPPKYFNAGMFVYEPNLLTYSHLL----ETLKVTPPSSFAEQDFLNNF---FRNIYKPISHTYNFVLAMLWRHPEHV 230 (314)
Q Consensus 158 ~g~~~~~yfNsGvmli~~~~~~~~~ll----~~~~~~~~~~~~DQdiLN~~---f~~~~~~Lp~~yN~~~~~~~~~~~~~ 230 (314)
.. ...+|||+||||||++++..+++. .+++.+..-...|||.||.. |.+++..|+.+||+... +|. +...
T Consensus 514 Fn-~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GL-Gy~-~~v~ 590 (639)
T PLN02829 514 FD-PHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGL-GYN-PNVN 590 (639)
T ss_pred cC-CcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCChHHHHhcCceEecChhheecCC-CCC-cccc
Confidence 11 135799999999999997655543 44433333356899999976 59999999999999863 332 2221
Q ss_pred --CCCCeEEEEeeCCCCCCCCcCCCCCCCChhhhHHHHHHHHHHHhhc
Q 037698 231 --ETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDK 276 (314)
Q Consensus 231 --~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~ 276 (314)
...++.||||+| ..|||...+ ...++++|..|....
T Consensus 591 ~~~i~~aaIIHynG-~~KPWle~~---------i~~yr~lW~kYl~~~ 628 (639)
T PLN02829 591 QRDIERAAVIHYNG-NMKPWLEIG---------IPKYRNYWSKYVDYD 628 (639)
T ss_pred hhcccCCeEEEECC-CCCccccCC---------cccchHHHHHHHhcC
Confidence 267899999999 899999986 356889999996644
No 21
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.90 E-value=3.3e-24 Score=205.05 Aligned_cols=175 Identities=18% Similarity=0.288 Sum_probs=124.2
Q ss_pred ccccchhhhcccc-ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCCCCCCcccccccccCCCCCCCCCC
Q 037698 81 VINYSKLRIWEFV-EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPAS 157 (314)
Q Consensus 81 ~~~y~KL~i~~l~-~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~ 157 (314)
..+|+||++|+++ +.+||||||+|+||++||++||+++ +..+|||.+|..+. ..+..+ +. ...|. +. ..
T Consensus 460 ~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f--~r~~~y-ln--fs~P~-i~--~y 531 (657)
T PLN02910 460 MLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESF--HRFDKY-LN--FSNPK-IS--EN 531 (657)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhh--hhhhhh-hc--cCChh-hh--hc
Confidence 4678999999976 5899999999999999999999984 56788888764320 000000 00 00010 00 00
Q ss_pred CCCCCCCcccceEEEEecCHHHHHHHHH---HHhc-CCCCCCCchhHHH---HHHccCceecCCcccccccccccCCCCC
Q 037698 158 MGSPPPKYFNAGMFVYEPNLLTYSHLLE---TLKV-TPPSSFAEQDFLN---NFFRNIYKPISHTYNFVLAMLWRHPEHV 230 (314)
Q Consensus 158 ~g~~~~~yfNsGvmli~~~~~~~~~ll~---~~~~-~~~~~~~DQdiLN---~~f~~~~~~Lp~~yN~~~~~~~~~~~~~ 230 (314)
.. ...+|||+||||||++++..+++.+ .+.+ +....+.|||.|| .+|.+++..||.+||+.. +++. +...
T Consensus 532 FN-s~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g~i~pLD~rWNv~G-LGyd-~~v~ 608 (657)
T PLN02910 532 FD-PNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTYPLDRSWHVLG-LGYD-PALN 608 (657)
T ss_pred cC-CCCceeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhCceeecCchheecC-CCCC-cccc
Confidence 11 1358999999999999977665554 3322 3456789999999 699999999999999985 3332 1111
Q ss_pred --CCCCeEEEEeeCCCCCCCCcCCCCCCCChhhhHHHHHHHHHHHhhc
Q 037698 231 --ETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDK 276 (314)
Q Consensus 231 --~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~ 276 (314)
...++.||||+| ..|||...+ ...++++|-.|...+
T Consensus 609 ~~~i~~AAVLHynG-~~KPWl~l~---------i~~Yr~~W~kYl~~d 646 (657)
T PLN02910 609 QTEIENAAVVHYNG-NYKPWLDLA---------IAKYKPYWSRYVQYD 646 (657)
T ss_pred cccccCcEEEEeCC-CCCcccccC---------cccchHHHHHHccCC
Confidence 267899999999 899999886 367889998887643
No 22
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.77 E-value=3.6e-20 Score=162.91 Aligned_cols=217 Identities=24% Similarity=0.372 Sum_probs=131.0
Q ss_pred EEEECCCCCHHHHHHHHHcCCEEEEecccCCCCc-----hhhhhhcccccccchhhhccccccceEEEEecCeeeccCch
Q 037698 38 AVAVLPDVPADHRKILVSQGCIVREIQPVYPPEN-----QTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENID 112 (314)
Q Consensus 38 vvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~-----~~~~~~~~~~~~y~KL~i~~l~~ydrvlYLD~D~lv~~did 112 (314)
++|...++.+...+.|.-.|..+..|..++..+. .......++..+|+||.+|++++||||||||+|.||++++|
T Consensus 106 ~vL~mkg~d~wk~d~l~ldga~~~~vq~i~~hevv~~~~di~~~~~rw~~mftKLrVfeqtEyDRvifLDsDaivlknmD 185 (368)
T COG5597 106 EVLTMKGCDLWKTDLLPLDGAFNARVQRINVHEVVPFTKDIKPDFHRWLDMFTKLRVFEQTEYDRVIFLDSDAIVLKNMD 185 (368)
T ss_pred eehhhcccchhhhhccccchHHHHHhccchHhhhhhhhhccCcCcCcHHHHhHHHHhhhhhhhceEEEeccchHHhhhhH
Confidence 3444456666555666655554444444432211 11112245778899999999999999999999999999999
Q ss_pred hhhcCCCCceecccchhcccC----------CCCCCccc--cccc--ccCCCCCCCCC-------CCCCCCCCcccceEE
Q 037698 113 HLFELPNGYLYAAMDCFCEKT----------WSNSPQYK--IGYC--QQCPEKVKWPA-------SMGSPPPKYFNAGMF 171 (314)
Q Consensus 113 eLf~~~~~~iaAv~d~~~~~~----------~~~~~~~~--~~~~--~~~p~~~~~p~-------~~g~~~~~yfNsGvm 171 (314)
+||+.|-..++|.+|.+..+. ++.+|.+. .+.. ...| -+-|+. ...+.-+.+||||+|
T Consensus 186 klFd~Pvyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r~~ly~P-ylf~a~~dq~~~hstpP~fk~~FnagLm 264 (368)
T COG5597 186 KLFDYPVYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMRAALYAP-YLFWARTDQTFLHSTPPDFKLKFNAGLM 264 (368)
T ss_pred HHhcchhhhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccHhhhccc-cccccccCCcccccCCCcHhhhhccCce
Confidence 999998555777777543221 11111100 0000 0011 011110 111122579999999
Q ss_pred EEecCHHHHHHHHHHHh--cCCCCCCCchhHHHHHHcc----CceecCCcccccccccccCCCCCCCCCeEEEEeeCCCC
Q 037698 172 VYEPNLLTYSHLLETLK--VTPPSSFAEQDFLNNFFRN----IYKPISHTYNFVLAMLWRHPEHVETEKVKVVHYCASGS 245 (314)
Q Consensus 172 li~~~~~~~~~ll~~~~--~~~~~~~~DQdiLN~~f~~----~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~IiHf~g~~~ 245 (314)
|++|++..+.+++..+- -.+.....+|.++|..++. -|.+++++||-. |.... +..-.+.+| .
T Consensus 265 v~~Psk~hm~riv~~alPklydda~mmeqsllnlaYn~~g~FPwerld~~yNG~----wa~~n--dlPylka~H-----g 333 (368)
T COG5597 265 VGLPSKMHMLRIVWFALPKLYDDADMMEQSLLNLAYNYEGFFPWERLDPRYNGY----WADAN--DLPYLKAWH-----G 333 (368)
T ss_pred eecchHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHhhhccCchhhcCcccccc----ccccc--ccchHHHhh-----c
Confidence 99999999999987762 1223455689999998774 378899999932 32111 123445555 4
Q ss_pred CCCCcCCCCCCCChhhhHHHHHHHHHH
Q 037698 246 KPWRYTGKEENMDREDIKMLVKKWKDI 272 (314)
Q Consensus 246 KPW~~~~~~~~~~~~~~~~~~~~Ww~~ 272 (314)
|||...+.+ ++ +.....||+-
T Consensus 334 K~W~y~g~~--fp----~i~~~ew~~d 354 (368)
T COG5597 334 KPWFYTGEQ--FP----DIAGLEWPQD 354 (368)
T ss_pred CcCCCCccc--Ch----hhhcCcChhh
Confidence 999998743 21 3445667744
No 23
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=99.29 E-value=5.1e-12 Score=119.26 Aligned_cols=199 Identities=33% Similarity=0.523 Sum_probs=144.8
Q ss_pred ccchhhhccccccceEEEEecCeeeccCchhhhcCCCCceecccchhcccCCCCCCcccccccccCCCCCCCCC--CCCC
Q 037698 83 NYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPA--SMGS 160 (314)
Q Consensus 83 ~y~KL~i~~l~~ydrvlYLD~D~lv~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~--~~g~ 160 (314)
.+.++.++++.++.+.+|++.|+-...+++++|+.....-.+...+++-..+++...+..+.|...++..-|+. .+..
T Consensus 113 ~~~~~~~~~~~~~~a~i~~~~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~ 192 (369)
T KOG1950|consen 113 RDDKIKIWRLIEDGAAIYLVDDIQRFRNDDANFDVPNELNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLFA 192 (369)
T ss_pred cccceeecceeccCceEEEecchhhccCccccccccchhcccccceeeecccccceEEeccchhcCChhhhhhhchhhcc
Confidence 47788999999999999999999999999999998654444555555544455555555556655444333321 1222
Q ss_pred CC--CCcccceEEEEecCHHHHHHHHHHHhcCCCCCCCchhHHHHHHccCceecCCcccccccccccCCCC--CC---CC
Q 037698 161 PP--PKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRNIYKPISHTYNFVLAMLWRHPEH--VE---TE 233 (314)
Q Consensus 161 ~~--~~yfNsGvmli~~~~~~~~~ll~~~~~~~~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~~~~~~~--~~---~~ 233 (314)
.+ ...||+|.|++.|+...++.+++......++.+++|+++|.+|...-.+.|..+|......|+++.. +. ..
T Consensus 193 ~~~l~~~~n~~~~v~~ps~~~~~~~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~~~~l~~~~~~ 272 (369)
T KOG1950|consen 193 TNILPLIFNSGLLVFEPSLCNYKDLMEFSEEFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPKKNDLSRASSV 272 (369)
T ss_pred CCCccceeccCccccCCCccchhhHHHhhcccCCCCCccchhhHHHhhcccCCCcccccccccccccCccccchhhcccc
Confidence 22 2359999999999999999988887776778899999999999875448888999988877776632 11 23
Q ss_pred CeEEEEeeCCCCCCCCc-CCCCCCCC-----hhhhHHHHHHHHHHHhhccccccc
Q 037698 234 KVKVVHYCASGSKPWRY-TGKEENMD-----REDIKMLVKKWKDIYEDKSLDYKN 282 (314)
Q Consensus 234 ~~~IiHf~g~~~KPW~~-~~~~~~~~-----~~~~~~~~~~Ww~~~~~~~~~~~~ 282 (314)
....+||.| ..|||.. ...+|++. +++....+..||..|..+..+++.
T Consensus 273 ~~~~~~y~~-~~~p~~~~~~~~~n~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 326 (369)
T KOG1950|consen 273 LRYALHYLG-ANKPELCYRDFDCNLDGDEFPRKDIDSLHKKWWDVYDDMSLDLKV 326 (369)
T ss_pred cchhhhccc-cCCCCccccCcccccccccccchhHHHHHhccchhhccCchhhhh
Confidence 345569998 5477654 45566653 556778899999999999888874
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=98.28 E-value=1.1e-05 Score=70.26 Aligned_cols=171 Identities=14% Similarity=0.174 Sum_probs=93.7
Q ss_pred CCHHHHHHHHHcCCEEEEeccc--CCCCchhhhhh-cccccccchhhhcc-ccc-cceEEEEecCeeeccCchhhhcCCC
Q 037698 45 VPADHRKILVSQGCIVREIQPV--YPPENQTQFAM-AYYVINYSKLRIWE-FVE-YAKMIYLDGDIQVFENIDHLFELPN 119 (314)
Q Consensus 45 ls~~~~~~L~~~~~~v~~i~~i--~~~~~~~~~~~-~~~~~~y~KL~i~~-l~~-ydrvlYLD~D~lv~~dideLf~~~~ 119 (314)
++++..+.|++.|..+..+... ........+.. .+...++.|..+-. +++ --.|+|+|+|++.++|..++|+.++
T Consensus 11 ~D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~~~~ 90 (212)
T PF03407_consen 11 LDEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFENPD 90 (212)
T ss_pred ECHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhccCC
Confidence 4556778888887665433322 11111111111 12234556654443 332 3359999999999999999994333
Q ss_pred CceecccchhcccCCCCCCcccccccccCCCCCCCCCCCCCCCCCcccceEEEEecCHHH---HHHHHHHHhcCCCCCCC
Q 037698 120 GYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLLT---YSHLLETLKVTPPSSFA 196 (314)
Q Consensus 120 ~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g~~~~~yfNsGvmli~~~~~~---~~~ll~~~~~~~~~~~~ 196 (314)
..+....|..... + . ......+|+|+|.++++..+ ++.+.+.+.+. ....
T Consensus 91 ~Di~~~~d~~~~~----------------~-~--------~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~--~~~~ 143 (212)
T PF03407_consen 91 ADILFSSDGWDGT----------------N-S--------DRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAES--PGCW 143 (212)
T ss_pred CceEEecCCCccc----------------c-h--------hhcCCccccceEEEecCHHHHHHHHHHHHHHHhC--CCcc
Confidence 3344433321000 0 0 01124569999999999965 44555555433 2345
Q ss_pred chhHHHHHHccC--------ceecCCcccccccccccCCCCC--C--CCCeEEEEeeC
Q 037698 197 EQDFLNNFFRNI--------YKPISHTYNFVLAMLWRHPEHV--E--TEKVKVVHYCA 242 (314)
Q Consensus 197 DQdiLN~~f~~~--------~~~Lp~~yN~~~~~~~~~~~~~--~--~~~~~IiHf~g 242 (314)
||.++|.++... +..||...-......+.....| . ..+|.+||.++
T Consensus 144 DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~~~~~~~~~~~p~~vH~n~ 201 (212)
T PF03407_consen 144 DQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSRDWAWVPTKNKPYIVHANC 201 (212)
T ss_pred hHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecchhhhhccccccceEEEcC
Confidence 999999999863 4566664321111111111111 1 35899999986
No 25
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=98.19 E-value=6.3e-06 Score=74.65 Aligned_cols=104 Identities=18% Similarity=0.267 Sum_probs=71.1
Q ss_pred eCcccHHHHHHHHHHHHhcCCCCcEEEEEC--CCCCHHHHHHHHH-cCCEEEEecccCCCCch-hhhhhcccccccchhh
Q 037698 13 GNGDYVKGVVGLVKGLRKAKSAYPLAVAVL--PDVPADHRKILVS-QGCIVREIQPVYPPENQ-TQFAMAYYVINYSKLR 88 (314)
Q Consensus 13 ~d~~Yl~~~~vl~~SL~~~~~~~~ivvlv~--~~ls~~~~~~L~~-~~~~v~~i~~i~~~~~~-~~~~~~~~~~~y~KL~ 88 (314)
..+.|+..+..+++.||+.++..||-|++. ++++++.++.|.. ....++.+..+-.++.. ..+.. ..-..|.+
T Consensus 8 ~g~~~~~~a~~lI~~LR~~g~~LPIEI~~~~~~dl~~~~~~~l~~~q~v~~vd~~~~~~~~~~~~~~~~---~~~~~K~l 84 (271)
T PF11051_consen 8 AGDKYLWLALRLIRVLRRLGNTLPIEIIYPGDDDLSKEFCEKLLPDQDVWFVDASCVIDPDYLGKSFSK---KGFQNKWL 84 (271)
T ss_pred ecCccHHHHHHHHHHHHHhCCCCCEEEEeCCccccCHHHHHHHhhhhhhheecceEEeecccccccccc---CCchhhhh
Confidence 456999999999999999999999977776 6799998888876 12222222222111100 00110 01123544
Q ss_pred hccccccceEEEEecCeeeccCchhhhcCCC
Q 037698 89 IWEFVEYAKMIYLDGDIQVFENIDHLFELPN 119 (314)
Q Consensus 89 i~~l~~ydrvlYLD~D~lv~~dideLf~~~~ 119 (314)
+--...++.||+||+|++.+.|++.||+.+.
T Consensus 85 A~l~ssFeevllLDaD~vpl~~p~~lF~~~~ 115 (271)
T PF11051_consen 85 ALLFSSFEEVLLLDADNVPLVDPEKLFESEE 115 (271)
T ss_pred hhhhCCcceEEEEcCCcccccCHHHHhcCcc
Confidence 4445689999999999999999999999864
No 26
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=96.79 E-value=0.0052 Score=64.54 Aligned_cols=221 Identities=16% Similarity=0.205 Sum_probs=123.3
Q ss_pred eeeCcccHHHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHH----HcCCEEEEecccCCCCchhh-hhhccccccc
Q 037698 11 LAGNGDYVKGVVGLVKGLRKAK-SAYPLAVAVLPDVPADHRKILV----SQGCIVREIQPVYPPENQTQ-FAMAYYVINY 84 (314)
Q Consensus 11 l~~d~~Yl~~~~vl~~SL~~~~-~~~~ivvlv~~~ls~~~~~~L~----~~~~~v~~i~~i~~~~~~~~-~~~~~~~~~y 84 (314)
+++..-|=.-+..++.|+.+|. +...+. ++.+-+|+.-++.+- +.+.++.-|.+ ..|....+ -...|..-.
T Consensus 1187 vASGHLYERflrIMm~SvlknTktpVKFW-fLkNyLSPtFKe~iP~mA~eYnFeyElv~Y-kWPrWLhqQ~EKQRiiWg- 1263 (1470)
T KOG1879|consen 1187 VASGHLYERFLRIMMLSVLKNTKTPVKFW-FLKNYLSPTFKESIPHMAKEYNFEYELVQY-KWPRWLHQQTEKQRIIWG- 1263 (1470)
T ss_pred eccccHHHHHHHHHHHHHHhCCCCceeEE-eehhhcChHHHHHHHHHHHHhCceEEEEEe-cCchhhhhhhhhhhhhhh-
Confidence 4566788889999999999873 334444 556678886655543 34555544443 33421100 001111111
Q ss_pred chh-hhcccc--ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCCCCCCcccccccccCCCCCCCCCCCC
Q 037698 85 SKL-RIWEFV--EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMG 159 (314)
Q Consensus 85 ~KL-~i~~l~--~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g 159 (314)
+|+ ++--|. ..+||||.|||-||+.||.||.+++ +.+.|=++=|.+.....-+..++.|+ |..++.
T Consensus 1264 yKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~EMDGyRFWK~GY---------W~~hL~ 1334 (1470)
T KOG1879|consen 1264 YKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRREMDGYRFWKQGY---------WKKHLR 1334 (1470)
T ss_pred hhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccccccchhHHhhhH---------HHHHhc
Confidence 243 333343 6899999999999999999998874 44455554332221110011112222 211221
Q ss_pred CCCCCcccceEEEEecCHHH----HHHH---HHHHhcC-CCCCCCchhHHHHHHcc-CceecCCcccccccccccCCCCC
Q 037698 160 SPPPKYFNAGMFVYEPNLLT----YSHL---LETLKVT-PPSSFAEQDFLNNFFRN-IYKPISHTYNFVLAMLWRHPEHV 230 (314)
Q Consensus 160 ~~~~~yfNsGvmli~~~~~~----~~~l---l~~~~~~-~~~~~~DQdiLN~~f~~-~~~~Lp~~yN~~~~~~~~~~~~~ 230 (314)
...|-=|...|+++++-. -+++ -+.+... .++.--|||+-|.+... -++.||..|=..- .|+..+
T Consensus 1335 --grkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqVpIkSLPqeWLWCE--TWC~d~-- 1408 (1470)
T KOG1879|consen 1335 --GRKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQVPIKSLPQEWLWCE--TWCDDE-- 1408 (1470)
T ss_pred --cCccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccccceeecccccCCcchhhhh--hhcCch--
Confidence 246888999999987611 1111 1222221 23555899999988764 4788888753211 133221
Q ss_pred CCCCeEEEEeeCCCCCCCCcCC
Q 037698 231 ETEKVKVVHYCASGSKPWRYTG 252 (314)
Q Consensus 231 ~~~~~~IiHf~g~~~KPW~~~~ 252 (314)
..+.+++|--| .-||....
T Consensus 1409 skkkAktIDLC---nNP~TKEp 1427 (1470)
T KOG1879|consen 1409 SKKKAKTIDLC---NNPLTKEP 1427 (1470)
T ss_pred hhhhchhhhhh---cCccccch
Confidence 25688888876 47887653
No 27
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=95.32 E-value=0.098 Score=49.34 Aligned_cols=141 Identities=18% Similarity=0.198 Sum_probs=78.3
Q ss_pred ccchhhhcc-----ccccceEEEEecCeeeccCchhhhcCCCCceecccchhcccCCCCCCcccccccccCCCCCCCCCC
Q 037698 83 NYSKLRIWE-----FVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPAS 157 (314)
Q Consensus 83 ~y~KL~i~~-----l~~ydrvlYLD~D~lv~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~ 157 (314)
.|+|+-+-+ ..+.+=+-|||+|+||+.. -|+++-..+ .+. | .. -.||+..
T Consensus 181 ~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNm---sfelPlery---~~~--N-------------lV----ihg~~~~ 235 (429)
T PLN03182 181 FWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDM---TFEIPLEKY---EGY--N-------------LV----IHGWDEL 235 (429)
T ss_pred chhHHHHHHHHHHHCCCceEEEEecCCceeecC---CCCCCHhHc---CCc--C-------------ee----eccchhh
Confidence 466654443 2468999999999999863 233321100 000 0 00 0122211
Q ss_pred -CCCCCCCcccceEEEEecCHHHHHHHHHHH----------------h----cCCCCCCCchhHHHHHHcc---Cc---e
Q 037698 158 -MGSPPPKYFNAGMFVYEPNLLTYSHLLETL----------------K----VTPPSSFAEQDFLNNFFRN---IY---K 210 (314)
Q Consensus 158 -~g~~~~~yfNsGvmli~~~~~~~~~ll~~~----------------~----~~~~~~~~DQdiLN~~f~~---~~---~ 210 (314)
...+.-..+|+|+++|+..++..+-+-.++ . ....+...||.+|-+++.. +| .
T Consensus 236 l~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv 315 (429)
T PLN03182 236 VYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKV 315 (429)
T ss_pred heeccccCccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccce
Confidence 122234689999999999985443332221 1 1123567899999988742 23 3
Q ss_pred ecCCccccccccccc-------------CCCCCCCCCeEEEEeeCCCCCCCCcCC
Q 037698 211 PISHTYNFVLAMLWR-------------HPEHVETEKVKVVHYCASGSKPWRYTG 252 (314)
Q Consensus 211 ~Lp~~yN~~~~~~~~-------------~~~~~~~~~~~IiHf~g~~~KPW~~~~ 252 (314)
.|-..|-+... |. ++..-+..-|.|.||+| .||-....
T Consensus 316 ~le~~y~l~Gy--w~~iv~~yee~~~~~~~g~gd~rwPfvtHF~G--ckpC~~~~ 366 (429)
T PLN03182 316 YLENSYYLHGY--WVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVG--CKPCGGYG 366 (429)
T ss_pred EEeecceeccc--cHHHHHHHHHHHHhcCCCCCCcccceeEeecc--ceecCCCC
Confidence 56555555432 21 12221245799999999 89986543
No 28
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=94.99 E-value=0.012 Score=52.31 Aligned_cols=78 Identities=17% Similarity=0.154 Sum_probs=0.0
Q ss_pred CCCCcccceEEEEecCHHHHHHHHHHHhc----CCC---CCCCchhHHHHHHccC------ceecCCc-ccccccccccC
Q 037698 161 PPPKYFNAGMFVYEPNLLTYSHLLETLKV----TPP---SSFAEQDFLNNFFRNI------YKPISHT-YNFVLAMLWRH 226 (314)
Q Consensus 161 ~~~~yfNsGvmli~~~~~~~~~ll~~~~~----~~~---~~~~DQdiLN~~f~~~------~~~Lp~~-yN~~~~~~~~~ 226 (314)
.+...+|+|+++++-+..... +++.+.. ... ..+.||++|-.+++.. ...+|.+ .|.... ..
T Consensus 140 ~d~~gLNtGsFliRns~ws~~-fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~nsy~~---~~ 215 (239)
T PF05637_consen 140 QDWNGLNTGSFLIRNSPWSRD-FLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWFNSYPE---DE 215 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccc---cc
Confidence 345789999999999986643 4444322 111 2468999998887742 3455542 222111 00
Q ss_pred CCCCCCCCeEEEEeeC
Q 037698 227 PEHVETEKVKVVHYCA 242 (314)
Q Consensus 227 ~~~~~~~~~~IiHf~g 242 (314)
......+...|+||+|
T Consensus 216 ~~~~~~~GDfvvhfaG 231 (239)
T PF05637_consen 216 CNYQYKEGDFVVHFAG 231 (239)
T ss_dssp ----------------
T ss_pred cccccccccccccccc
Confidence 1111245679999998
No 29
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=92.34 E-value=0.15 Score=47.62 Aligned_cols=72 Identities=14% Similarity=0.172 Sum_probs=46.2
Q ss_pred EEEecCeeeccCchhhhcCCCCceecccchhcccCCCCCCcccccccccCCCCCCCCCCCCCCCCCcccceEEEEecCHH
Q 037698 99 IYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGMFVYEPNLL 178 (314)
Q Consensus 99 lYLD~D~lv~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g~~~~~yfNsGvmli~~~~~ 178 (314)
||||+|+||++++..|=+. |+..++ .. .-.+.|.+||.+++...
T Consensus 242 vYLDTDvIvLksl~~l~N~----ig~~~~-----------------------~~---------~~~~lnnavl~F~k~Hp 285 (409)
T KOG1928|consen 242 VYLDTDVIVLKSLSNLRNV----IGVDPA-----------------------TQ---------AWTRLNNAVLIFDKNHP 285 (409)
T ss_pred EEeeccEEEeccccccccc----ccccch-----------------------hh---------HHHhhcCceeecCCCCH
Confidence 7999999999999887654 220000 00 01467899999999986
Q ss_pred HHHHHH-HHHhcCC--CCCCCchhHHHHHHc
Q 037698 179 TYSHLL-ETLKVTP--PSSFAEQDFLNNFFR 206 (314)
Q Consensus 179 ~~~~ll-~~~~~~~--~~~~~DQdiLN~~f~ 206 (314)
...+++ |+...++ .+...-.+++..+++
T Consensus 286 fl~~cl~eF~~tfNg~~WG~NGP~LvTRVak 316 (409)
T KOG1928|consen 286 FLLECLREFALTYNGNIWGHNGPYLVTRVAK 316 (409)
T ss_pred HHHHHHHHHHHhccccccccCCcHHHHHHHH
Confidence 655555 4444443 234455667777665
No 30
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=92.17 E-value=1.1 Score=36.41 Aligned_cols=60 Identities=15% Similarity=0.136 Sum_probs=47.0
Q ss_pred CCeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHc--CCEEEEecc
Q 037698 3 SKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQ--GCIVREIQP 65 (314)
Q Consensus 3 ~~~A~vT~l~~d~~Yl~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~--~~~v~~i~~ 65 (314)
+..++|| ++.++++..+.-++.|++++.|+..++ |++=|+++..++.|++. +.+++....
T Consensus 60 ~~vvfVS--a~S~~h~~~~~~~i~si~~~~P~~k~i-lY~LgL~~~~i~~L~~~~~n~evr~Fn~ 121 (142)
T PF07801_consen 60 SDVVFVS--ATSDNHFNESMKSISSIRKFYPNHKII-LYDLGLSEEQIKKLKKNFCNVEVRKFNF 121 (142)
T ss_pred CccEEEE--EecchHHHHHHHHHHHHHHHCCCCcEE-EEeCCCCHHHHHHHHhcCCceEEEECCC
Confidence 3567787 346788899999999999999988765 78899999999999874 345554444
No 31
>PLN03181 glycosyltransferase; Provisional
Probab=88.73 E-value=2.5 Score=40.22 Aligned_cols=113 Identities=17% Similarity=0.162 Sum_probs=60.3
Q ss_pred ccchhhhcc-----ccccceEEEEecCeeeccCchhhhcCCCCceecccchhcccCCCCCCcccccccccCCCCCCCCCC
Q 037698 83 NYSKLRIWE-----FVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPAS 157 (314)
Q Consensus 83 ~y~KL~i~~-----l~~ydrvlYLD~D~lv~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~ 157 (314)
.|+|+-+-+ ..+.+-+-|||+|+||+..= |.++...+ .+. +.. -.+||..
T Consensus 182 ~WaKipalRaAM~a~PeAEWfWWLDsDALIMNp~---~sLPl~ry---~~~---------------NLv----vhg~p~~ 236 (453)
T PLN03181 182 YWAKLPVVRAAMLAHPEAEWIWWVDSDAVFTDMD---FKLPLHRY---RDH---------------NLV----VHGWPKL 236 (453)
T ss_pred hhhHHHHHHHHHHHCCCceEEEEecCCceeecCC---CCCCHhhc---CCc---------------ccc----ccCCccc
Confidence 566765444 24689999999999999651 22221100 000 000 1233321
Q ss_pred C-CCCCCCcccceEEEEecCHHHHHHHHHHHh----------------c---C-CCCCCCchhHHHHHHcc---Cc---e
Q 037698 158 M-GSPPPKYFNAGMFVYEPNLLTYSHLLETLK----------------V---T-PPSSFAEQDFLNNFFRN---IY---K 210 (314)
Q Consensus 158 ~-g~~~~~yfNsGvmli~~~~~~~~~ll~~~~----------------~---~-~~~~~~DQdiLN~~f~~---~~---~ 210 (314)
+ ....-..||+|+++|+-.++...-|-.+.. . . ....-.||.+|-+++-. +| .
T Consensus 237 vy~~qdw~GlN~GsFLIRNcqWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ 316 (453)
T PLN03181 237 IYEKRSWTALNAGVFLIRNCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKI 316 (453)
T ss_pred ccccccccccceeeeEEecCHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccce
Confidence 1 112336899999999988854333322211 0 1 12345899999877542 23 3
Q ss_pred ecCCcccccc
Q 037698 211 PISHTYNFVL 220 (314)
Q Consensus 211 ~Lp~~yN~~~ 220 (314)
.|...|-++.
T Consensus 317 ylE~~yy~~G 326 (453)
T PLN03181 317 YLEGEYYFEG 326 (453)
T ss_pred eeecceeeee
Confidence 5555555543
No 32
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=88.05 E-value=3.4 Score=37.08 Aligned_cols=27 Identities=22% Similarity=0.316 Sum_probs=22.5
Q ss_pred CCCchhHHHHHHccC--ceecCCcccccc
Q 037698 194 SFAEQDFLNNFFRNI--YKPISHTYNFVL 220 (314)
Q Consensus 194 ~~~DQdiLN~~f~~~--~~~Lp~~yN~~~ 220 (314)
.+.|..-||.+|-.+ .+.||+.|+...
T Consensus 219 ~wHDESHLNkYf~~~Kp~KiLSPeY~w~e 247 (271)
T cd02515 219 RWHDESHLNKYFLLHKPTKVLSPEYLWDD 247 (271)
T ss_pred EeecHhHhHHHHhhCCCCeecChhhcCCc
Confidence 679999999998753 789999998764
No 33
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=83.16 E-value=12 Score=35.15 Aligned_cols=82 Identities=22% Similarity=0.149 Sum_probs=49.4
Q ss_pred CCCCCCCcccceEEEEecCHH---HHHHHHHHHhcCCCCCCCchhHHHHHHcc------CceecCCcc-cccccccccCC
Q 037698 158 MGSPPPKYFNAGMFVYEPNLL---TYSHLLETLKVTPPSSFAEQDFLNNFFRN------IYKPISHTY-NFVLAMLWRHP 227 (314)
Q Consensus 158 ~g~~~~~yfNsGvmli~~~~~---~~~~ll~~~~~~~~~~~~DQdiLN~~f~~------~~~~Lp~~y-N~~~~~~~~~~ 227 (314)
+++.....+|+|=+|++-+.. .++..-+-+-........+|++|-.+++. .|..||.+| |.... .++
T Consensus 241 ii~qD~nG~naGSfLirns~~~~~llD~w~dp~l~~~~~~~~Eq~al~~~~e~h~~l~~~vgilp~r~ins~~~---~~~ 317 (364)
T KOG4748|consen 241 IIPQDCNGINAGSFLIRNSEWGRLLLDAWNDPLLYELLWGQKEQDALGHFLENHPQLHSHVGILPLRYINSYPN---GAP 317 (364)
T ss_pred ecccCCCCccccceEEecCccchhHHHhccCHHHHhhccchHHHHHHHHHHhhchhhhhheeeccHHHHhcCCC---CCC
Confidence 444555779999999987762 22222222211123456899999988774 477888774 21110 122
Q ss_pred CCCCCCCeEEEEeeC
Q 037698 228 EHVETEKVKVVHYCA 242 (314)
Q Consensus 228 ~~~~~~~~~IiHf~g 242 (314)
..-..+...++||+|
T Consensus 318 ~~g~~egdlvvhFaG 332 (364)
T KOG4748|consen 318 GYGYEEGDLVVHFAG 332 (364)
T ss_pred CCccccCCeEEEecc
Confidence 222367889999999
No 34
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=80.78 E-value=6.4 Score=33.93 Aligned_cols=87 Identities=14% Similarity=0.016 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhcCC---CCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhcccccc
Q 037698 19 KGVVGLVKGLRKAKS---AYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEY 95 (314)
Q Consensus 19 ~~~~vl~~SL~~~~~---~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~y 95 (314)
..+.-++.|+.+... ++.++ +++++-+++..+.+++.......+..+..+.. .. ...+-...+....
T Consensus 13 ~~l~~~l~sl~~q~~~~~~~evi-vvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~~--~~-------~~a~N~g~~~a~~ 82 (249)
T cd02525 13 KYIEELLESLLNQSYPKDLIEII-VVDGGSTDGTREIVQEYAAKDPRIRLIDNPKR--IQ-------SAGLNIGIRNSRG 82 (249)
T ss_pred hhHHHHHHHHHhccCCCCccEEE-EEeCCCCccHHHHHHHHHhcCCeEEEEeCCCC--Cc-------hHHHHHHHHHhCC
Confidence 455667888876543 34444 55666666566666655432212222222111 00 1112222333478
Q ss_pred ceEEEEecCeeeccC-chhhh
Q 037698 96 AKMIYLDGDIQVFEN-IDHLF 115 (314)
Q Consensus 96 drvlYLD~D~lv~~d-ideLf 115 (314)
|-+++||+|.++..+ +..+.
T Consensus 83 d~v~~lD~D~~~~~~~l~~~~ 103 (249)
T cd02525 83 DIIIRVDAHAVYPKDYILELV 103 (249)
T ss_pred CEEEEECCCccCCHHHHHHHH
Confidence 999999999987544 33343
No 35
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=80.35 E-value=1.2 Score=35.51 Aligned_cols=86 Identities=20% Similarity=0.255 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhc-CCCCcEEEEECCCCCHHHHHHHHHc---CCEEEEecccCCCCchhhhhhcccccccchhhhcccccc
Q 037698 20 GVVGLVKGLRKA-KSAYPLAVAVLPDVPADHRKILVSQ---GCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEY 95 (314)
Q Consensus 20 ~~~vl~~SL~~~-~~~~~ivvlv~~~ls~~~~~~L~~~---~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~y 95 (314)
.+.-++.||++. .+...++ +++++-+++..+.+++. +..+.-+.. +++. .+ .-.+-...+....
T Consensus 12 ~l~~~l~sl~~q~~~~~eii-vvdd~s~d~~~~~~~~~~~~~~~i~~i~~---~~n~-g~-------~~~~n~~~~~a~~ 79 (169)
T PF00535_consen 12 YLERTLESLLKQTDPDFEII-VVDDGSTDETEEILEEYAESDPNIRYIRN---PENL-GF-------SAARNRGIKHAKG 79 (169)
T ss_dssp THHHHHHHHHHHSGCEEEEE-EEECS-SSSHHHHHHHHHCCSTTEEEEEH---CCCS-HH-------HHHHHHHHHH--S
T ss_pred HHHHHHHHHhhccCCCEEEE-Eeccccccccccccccccccccccccccc---cccc-cc-------cccccccccccce
Confidence 344556666655 2333343 55565566666777664 223322221 1111 11 1223344445567
Q ss_pred ceEEEEecCeeeccC-chhhhcC
Q 037698 96 AKMIYLDGDIQVFEN-IDHLFEL 117 (314)
Q Consensus 96 drvlYLD~D~lv~~d-ideLf~~ 117 (314)
+-|+++|+|.++..+ +..|.+.
T Consensus 80 ~~i~~ld~D~~~~~~~l~~l~~~ 102 (169)
T PF00535_consen 80 EYILFLDDDDIISPDWLEELVEA 102 (169)
T ss_dssp SEEEEEETTEEE-TTHHHHHHHH
T ss_pred eEEEEeCCCceEcHHHHHHHHHH
Confidence 799999999999998 7777664
No 36
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=78.33 E-value=13 Score=29.39 Aligned_cols=81 Identities=12% Similarity=-0.004 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHhcCC-CCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhccccccc
Q 037698 18 VKGVVGLVKGLRKAKS-AYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYA 96 (314)
Q Consensus 18 l~~~~vl~~SL~~~~~-~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~yd 96 (314)
...+.-++.||..... ...++ ++.++-+++..+.+++....+. .+..+++.. ...++-...+..+.+
T Consensus 9 ~~~l~~~l~sl~~~~~~~~~ii-ivdd~s~~~~~~~~~~~~~~~~---~~~~~~~~g--------~~~a~n~~~~~~~~~ 76 (166)
T cd04186 9 LEYLKACLDSLLAQTYPDFEVI-VVDNASTDGSVELLRELFPEVR---LIRNGENLG--------FGAGNNQGIREAKGD 76 (166)
T ss_pred HHHHHHHHHHHHhccCCCeEEE-EEECCCCchHHHHHHHhCCCeE---EEecCCCcC--------hHHHhhHHHhhCCCC
Confidence 4566778888887643 34444 5666666666666766543222 111111110 112223333344789
Q ss_pred eEEEEecCeeeccC
Q 037698 97 KMIYLDGDIQVFEN 110 (314)
Q Consensus 97 rvlYLD~D~lv~~d 110 (314)
-++++|+|..+..+
T Consensus 77 ~i~~~D~D~~~~~~ 90 (166)
T cd04186 77 YVLLLNPDTVVEPG 90 (166)
T ss_pred EEEEECCCcEECcc
Confidence 99999999987654
No 37
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=77.28 E-value=21 Score=33.25 Aligned_cols=190 Identities=14% Similarity=0.191 Sum_probs=79.8
Q ss_pred eeeCcccHHHHHHHHHHHHhc-CCCCcE-EEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhh
Q 037698 11 LAGNGDYVKGVVGLVKGLRKA-KSAYPL-AVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLR 88 (314)
Q Consensus 11 l~~d~~Yl~~~~vl~~SL~~~-~~~~~i-vvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~ 88 (314)
+++ ..|...+.-.+.|.-++ -+.+++ +++.||..+.--.-.|.. +-++..+. + ++ ...+. ..+..|+.
T Consensus 106 fA~-GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~~vP~i~l~~-~r~~~V~~-v--~~-~~~Wq----d~sm~Rm~ 175 (337)
T PF03414_consen 106 FAT-GKYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPSKVPRIELGP-GRRLKVFE-V--QE-EKRWQ----DISMMRME 175 (337)
T ss_dssp EE--CCHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GGGS------T-TEEEEEEE----SG-GSSHH----HHHHHHHH
T ss_pred Eec-ccHHHHHHHHHHhHHHhccCCcEEEEEEEeCchhhCCccccCC-CceeEEEE-e--cc-cCCCc----cchhHHHH
Confidence 444 68999888899998877 455554 335555422100011111 11222111 1 10 01111 12333433
Q ss_pred hcc------c-cccceEEEEecCeeeccCchh-hhcCCCCceecccchhcccCCCCCCcccccccccCCCC-CCCCCCCC
Q 037698 89 IWE------F-VEYAKMIYLDGDIQVFENIDH-LFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEK-VKWPASMG 159 (314)
Q Consensus 89 i~~------l-~~ydrvlYLD~D~lv~~dide-Lf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~-~~~p~~~g 159 (314)
+.. + -++|-+..+|+|+++.+++.. .+ +..+|...-.+-.. ....|.-+ ..|.. .-.|...|
T Consensus 176 ~i~~~i~~~~~~EvDYLFc~dvd~~F~~~vGvE~L---g~lva~LHp~~y~~---~~~~FpYE---Rrp~S~AyIp~~eG 246 (337)
T PF03414_consen 176 MISEHIEQHIQHEVDYLFCMDVDMVFQDHVGVEIL---GDLVATLHPWFYFK---PRESFPYE---RRPKSQAYIPYGEG 246 (337)
T ss_dssp HHHHHHHHCHHHH-SEEEEEESSEEE-S-B-GGG----SSEEEEESTTTTTS---TGGGS--B----STTSTTB--TT--
T ss_pred HHHHHHHHHHhhcCCEEEEEecceEEecccCHHHH---HHHHHHhCHHHHCC---ChhhCccc---cCccccccccCCCC
Confidence 322 2 369999999999999998763 22 22222221100000 00000001 01111 11111122
Q ss_pred CCCCCcccceEEEEecCH--HHHH----HHHHHHhcCCCCCCCchhHHHHHHc--cCceecCCcccccccc
Q 037698 160 SPPPKYFNAGMFVYEPNL--LTYS----HLLETLKVTPPSSFAEQDFLNNFFR--NIYKPISHTYNFVLAM 222 (314)
Q Consensus 160 ~~~~~yfNsGvmli~~~~--~~~~----~ll~~~~~~~~~~~~DQdiLN~~f~--~~~~~Lp~~yN~~~~~ 222 (314)
+-|+-+|+.==.+.+ .+.+ .+++-..++-...+.|..=||.+|- .-.+.|++.|+.....
T Consensus 247 ---DfYY~ga~fGGt~~~vl~Lt~~c~~~i~~D~~n~I~A~WhDESHLNKYfl~~KPtKvLSPEY~Wd~~~ 314 (337)
T PF03414_consen 247 ---DFYYHGAFFGGTVEEVLRLTEACHQGIMQDKANGIEALWHDESHLNKYFLYHKPTKVLSPEYCWDERF 314 (337)
T ss_dssp ---S--EECCEEEECHHHHHHHHHHHHHHHHHHHHTT---TTCHHHHHHHHHHHS--SEEE-GGGSBSHHH
T ss_pred ---CeEEeceecCCcHHHHHHHHHHHHHHHHhhhhcCceEeccchhhhHHHHhhCCCceecCHHHccCccC
Confidence 346666666444433 2222 2222222222346899999999885 2378899999887643
No 38
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=76.42 E-value=11 Score=32.81 Aligned_cols=87 Identities=9% Similarity=0.054 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhcC-CC--CcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhcccccc
Q 037698 19 KGVVGLVKGLRKAK-SA--YPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEY 95 (314)
Q Consensus 19 ~~~~vl~~SL~~~~-~~--~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~y 95 (314)
..+..++.|+.... +. ..++ +++++-++...+.+++.... .+..+..+.+.. ....+-...+....
T Consensus 42 ~~l~~~l~si~~q~~~~~~~eii-vvdd~s~d~t~~~~~~~~~~--~v~~i~~~~~~g--------~~~a~n~gi~~a~~ 110 (251)
T cd06439 42 AVIEAKLENLLALDYPRDRLEII-VVSDGSTDGTAEIAREYADK--GVKLLRFPERRG--------KAAALNRALALATG 110 (251)
T ss_pred HHHHHHHHHHHhCcCCCCcEEEE-EEECCCCccHHHHHHHHhhC--cEEEEEcCCCCC--------hHHHHHHHHHHcCC
Confidence 55677788887643 23 3344 55666666666666665422 111111111111 01122222233356
Q ss_pred ceEEEEecCeeeccC-chhhhc
Q 037698 96 AKMIYLDGDIQVFEN-IDHLFE 116 (314)
Q Consensus 96 drvlYLD~D~lv~~d-ideLf~ 116 (314)
|-|+++|+|+++..+ +..+.+
T Consensus 111 d~i~~lD~D~~~~~~~l~~l~~ 132 (251)
T cd06439 111 EIVVFTDANALLDPDALRLLVR 132 (251)
T ss_pred CEEEEEccccCcCHHHHHHHHH
Confidence 899999999999754 444443
No 39
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=76.06 E-value=8 Score=29.71 Aligned_cols=83 Identities=13% Similarity=0.046 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHhcCC-CCcEEEEECCCCCHHHHHHHHHcCCE---EEEecccCCCCchhhhhhcccccccchhhhcccc
Q 037698 18 VKGVVGLVKGLRKAKS-AYPLAVAVLPDVPADHRKILVSQGCI---VREIQPVYPPENQTQFAMAYYVINYSKLRIWEFV 93 (314)
Q Consensus 18 l~~~~vl~~SL~~~~~-~~~ivvlv~~~ls~~~~~~L~~~~~~---v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~ 93 (314)
...+..++.|+.+... ...++ +++++-+++..+.+++.... +..+.. +... .....+-...+..
T Consensus 9 ~~~l~~~l~s~~~~~~~~~~i~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------g~~~~~~~~~~~~ 76 (156)
T cd00761 9 EPYLERCLESLLAQTYPNFEVI-VVDDGSTDGTLEILEEYAKKDPRVIRVIN---EENQ--------GLAAARNAGLKAA 76 (156)
T ss_pred HHHHHHHHHHHHhCCccceEEE-EEeCCCCccHHHHHHHHHhcCCCeEEEEe---cCCC--------ChHHHHHHHHHHh
Confidence 4667788888887753 34444 55566555555555554321 111111 1000 0011222233333
Q ss_pred ccceEEEEecCeeeccCch
Q 037698 94 EYAKMIYLDGDIQVFENID 112 (314)
Q Consensus 94 ~ydrvlYLD~D~lv~~did 112 (314)
+.+.++++|+|.++..+.-
T Consensus 77 ~~d~v~~~d~D~~~~~~~~ 95 (156)
T cd00761 77 RGEYILFLDADDLLLPDWL 95 (156)
T ss_pred cCCEEEEECCCCccCccHH
Confidence 7899999999999876643
No 40
>PRK15384 type III secretion system protein; Provisional
Probab=75.66 E-value=2.6 Score=37.14 Aligned_cols=25 Identities=24% Similarity=0.446 Sum_probs=21.0
Q ss_pred cceEEEEecCeeeccCchhhhcCCC
Q 037698 95 YAKMIYLDGDIQVFENIDHLFELPN 119 (314)
Q Consensus 95 ydrvlYLD~D~lv~~dideLf~~~~ 119 (314)
-+-|||||+|||+.+.+.-|+.-++
T Consensus 216 ~~GCIYLDaDMilT~KLG~ly~PDG 240 (336)
T PRK15384 216 NSGCIYLDADMIITEKLGGIYIPDG 240 (336)
T ss_pred CCceEEeeccceeecccccEEcCCc
Confidence 4669999999999999988876554
No 41
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=75.51 E-value=2.8 Score=36.94 Aligned_cols=25 Identities=24% Similarity=0.476 Sum_probs=21.0
Q ss_pred cceEEEEecCeeeccCchhhhcCCC
Q 037698 95 YAKMIYLDGDIQVFENIDHLFELPN 119 (314)
Q Consensus 95 ydrvlYLD~D~lv~~dideLf~~~~ 119 (314)
-+-|||||+|||+.+.|.-|+.-++
T Consensus 211 ~~GCIYLD~DMilT~KLG~ly~PDG 235 (326)
T PRK15382 211 CEGCIYLDADMIITDKLGVLYAPDG 235 (326)
T ss_pred CCceEEeecceeeecccccEEcCCc
Confidence 4679999999999999988876554
No 42
>PRK15383 type III secretion system protein; Provisional
Probab=75.02 E-value=2.8 Score=36.87 Aligned_cols=25 Identities=24% Similarity=0.408 Sum_probs=21.0
Q ss_pred cceEEEEecCeeeccCchhhhcCCC
Q 037698 95 YAKMIYLDGDIQVFENIDHLFELPN 119 (314)
Q Consensus 95 ydrvlYLD~D~lv~~dideLf~~~~ 119 (314)
-+-+||||+|||+.+.|.-|+.-++
T Consensus 219 ~~GCIYLD~DMilT~KLG~ly~PDG 243 (335)
T PRK15383 219 GGGCIYLDADMLLTDKLGTLYLPDG 243 (335)
T ss_pred CCceEEeecceeeecccccEEcCCc
Confidence 4569999999999999988876554
No 43
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=74.41 E-value=8.3 Score=34.80 Aligned_cols=88 Identities=15% Similarity=0.163 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhcCCCCcE-EEEECCCCCHHHHHHHHH----cCCE-EEEecccCCCCchhhhhhcccccccchhhhccc
Q 037698 19 KGVVGLVKGLRKAKSAYPL-AVAVLPDVPADHRKILVS----QGCI-VREIQPVYPPENQTQFAMAYYVINYSKLRIWEF 92 (314)
Q Consensus 19 ~~~~vl~~SL~~~~~~~~i-vvlv~~~ls~~~~~~L~~----~~~~-v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l 92 (314)
.-+..++.|+....+...+ +|+++++-+++..+.|++ .+.. ++.... + ...+. .+-+|=...+.
T Consensus 17 ~~l~~~l~~l~~~~~~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~---~--~~~f~-----~a~arN~g~~~ 86 (281)
T PF10111_consen 17 ERLRNCLESLSQFQSDPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHED---N--GEPFS-----RAKARNIGAKY 86 (281)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCC---C--CCCcC-----HHHHHHHHHHH
Confidence 3455667788775444454 345556655554344443 2332 221111 0 00111 11222233334
Q ss_pred cccceEEEEecCeeeccC-chhhhc
Q 037698 93 VEYAKMIYLDGDIQVFEN-IDHLFE 116 (314)
Q Consensus 93 ~~ydrvlYLD~D~lv~~d-ideLf~ 116 (314)
..-+-|++||+|+++-.+ +..+..
T Consensus 87 A~~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 87 ARGDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred cCCCEEEEEcCCeeeCHHHHHHHHH
Confidence 478999999999999753 333444
No 44
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=73.45 E-value=1.9 Score=32.70 Aligned_cols=87 Identities=10% Similarity=0.109 Sum_probs=42.9
Q ss_pred HHHHHHHHhcCCCCcEEEEECCCCC-----HHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhcc-cccc
Q 037698 22 VGLVKGLRKAKSAYPLAVAVLPDVP-----ADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWE-FVEY 95 (314)
Q Consensus 22 ~vl~~SL~~~~~~~~ivvlv~~~ls-----~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~-l~~y 95 (314)
.-.+.|..++||++.++++ +++.. ....+.+.+....+ ..+............-..+-+.|+.+-- ...
T Consensus 5 ~~~i~s~~~~nP~~~~~~~-~d~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~sD~~R~~~L~~~GG- 79 (103)
T PF04488_consen 5 QCSIESWARHNPDYEYILW-TDESDNVRVKRIDIEFLFEKTPWF---LELYNKWEPGRYPNYAHKSDLLRYLVLYKYGG- 79 (103)
T ss_pred HHHHHHHHHHCCCCEEEEE-ECCCcchhhhHHHHHHHHhCChHH---HHHHhhhhcccccchHHHHHHHHHHHHHHcCc-
Confidence 4567889999999887754 55433 22233333311100 0000000000000000123355654432 223
Q ss_pred ceEEEEecCeeeccCc-hhhhc
Q 037698 96 AKMIYLDGDIQVFENI-DHLFE 116 (314)
Q Consensus 96 drvlYLD~D~lv~~di-deLf~ 116 (314)
+|+|.|+++++++ +.+..
T Consensus 80 ---iY~D~D~~~~rpl~~~~~~ 98 (103)
T PF04488_consen 80 ---IYLDLDVICLRPLDDPWLP 98 (103)
T ss_pred ---EEEeCccccCcchhhhhhc
Confidence 8999999999999 77654
No 45
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=72.58 E-value=27 Score=29.85 Aligned_cols=93 Identities=11% Similarity=0.015 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcC--CEEEEecccCCCCchhhhhhcccccccchhhhccccccc
Q 037698 19 KGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQG--CIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYA 96 (314)
Q Consensus 19 ~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~~--~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~yd 96 (314)
..+..++.|+.+.. ...++ ++.++-+++..+.|+... ..+. +. ..+ +.. . ....-...+....|
T Consensus 14 ~~l~~~l~sl~~q~-~~eii-vvdd~s~d~~~~~l~~~~~~~~~~-v~--~~~-~~g-~-------~~a~n~g~~~a~~d 79 (235)
T cd06434 14 DVFRECLRSILRQK-PLEII-VVTDGDDEPYLSILSQTVKYGGIF-VI--TVP-HPG-K-------RRALAEGIRHVTTD 79 (235)
T ss_pred HHHHHHHHHHHhCC-CCEEE-EEeCCCChHHHHHHHhhccCCcEE-EE--ecC-CCC-h-------HHHHHHHHHHhCCC
Confidence 55677788888665 45554 556666666666653321 1111 11 111 100 0 01111122234789
Q ss_pred eEEEEecCeeeccC-chhhhcC-CCCceecc
Q 037698 97 KMIYLDGDIQVFEN-IDHLFEL-PNGYLYAA 125 (314)
Q Consensus 97 rvlYLD~D~lv~~d-ideLf~~-~~~~iaAv 125 (314)
-|++||+|+.+..+ |..+.+. ....++++
T Consensus 80 ~v~~lD~D~~~~~~~l~~l~~~~~~~~v~~v 110 (235)
T cd06434 80 IVVLLDSDTVWPPNALPEMLKPFEDPKVGGV 110 (235)
T ss_pred EEEEECCCceeChhHHHHHHHhccCCCEeEE
Confidence 99999999999987 5555543 22234444
No 46
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=72.46 E-value=1.8 Score=40.95 Aligned_cols=37 Identities=32% Similarity=0.571 Sum_probs=33.0
Q ss_pred cccccchhhhccccccceEEEEecCeeeccCchhhhc
Q 037698 80 YVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFE 116 (314)
Q Consensus 80 ~~~~y~KL~i~~l~~ydrvlYLD~D~lv~~dideLf~ 116 (314)
....+.+++.|.+..+++.+.+|+|..++.+.+.+|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~ 185 (369)
T KOG1950|consen 149 NELNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFS 185 (369)
T ss_pred chhcccccceeeecccccceEEeccchhcCChhhhhh
Confidence 3456889999999999999999999999999999988
No 47
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=71.27 E-value=25 Score=30.55 Aligned_cols=84 Identities=11% Similarity=0.023 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHhcC-CCCcE-EEEECCCCCHHHHHHHHHcCC-EEEEecccCCCCchhhhhhcccccccchhhhcccccc
Q 037698 19 KGVVGLVKGLRKAK-SAYPL-AVAVLPDVPADHRKILVSQGC-IVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEY 95 (314)
Q Consensus 19 ~~~~vl~~SL~~~~-~~~~i-vvlv~~~ls~~~~~~L~~~~~-~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~y 95 (314)
..+.-++.||.... +...+ ++++.++-+++..+.+++.+. ....+..+....+.. .. .++=...+....
T Consensus 14 ~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~~~G-~~-------~a~n~g~~~a~g 85 (241)
T cd06427 14 EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQPRT-KP-------KACNYALAFARG 85 (241)
T ss_pred HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCCCCc-hH-------HHHHHHHHhcCC
Confidence 55677888887642 21112 334556666777777776532 111121111111110 00 111122223467
Q ss_pred ceEEEEecCeeeccC
Q 037698 96 AKMIYLDGDIQVFEN 110 (314)
Q Consensus 96 drvlYLD~D~lv~~d 110 (314)
|-|+++|+|+++-.+
T Consensus 86 d~i~~~DaD~~~~~~ 100 (241)
T cd06427 86 EYVVIYDAEDAPDPD 100 (241)
T ss_pred CEEEEEcCCCCCChH
Confidence 899999999987654
No 48
>PRK10073 putative glycosyl transferase; Provisional
Probab=70.80 E-value=14 Score=34.24 Aligned_cols=103 Identities=13% Similarity=0.079 Sum_probs=53.2
Q ss_pred CCCCeEEEEEeeeCcccHHHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHc---CCEEEEecccCCCCchhhhh
Q 037698 1 MSSKRAYVTFLAGNGDYVKGVVGLVKGLRKAK-SAYPLAVAVLPDVPADHRKILVSQ---GCIVREIQPVYPPENQTQFA 76 (314)
Q Consensus 1 m~~~~A~vT~l~~d~~Yl~~~~vl~~SL~~~~-~~~~ivvlv~~~ls~~~~~~L~~~---~~~v~~i~~i~~~~~~~~~~ 76 (314)
|+...--++++..-.+--..+.-++.||.... ++.. +++++++-++...+.+++. ...+..++ . ++. ..
T Consensus 1 m~~~~p~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~~E-IIiVdDgStD~t~~i~~~~~~~~~~i~vi~---~-~n~-G~- 73 (328)
T PRK10073 1 MMNSTPKLSIIIPLYNAGKDFRAFMESLIAQTWTALE-IIIVNDGSTDNSVEIAKHYAENYPHVRLLH---Q-ANA-GV- 73 (328)
T ss_pred CCCCCCeEEEEEeccCCHHHHHHHHHHHHhCCCCCeE-EEEEeCCCCccHHHHHHHHHhhCCCEEEEE---C-CCC-Ch-
Confidence 55544445544432333456677788888553 3344 4466777666665666543 22232222 1 111 11
Q ss_pred hcccccccchhhhccccccceEEEEecCeeeccC-chhhhc
Q 037698 77 MAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFEN-IDHLFE 116 (314)
Q Consensus 77 ~~~~~~~y~KL~i~~l~~ydrvlYLD~D~lv~~d-ideLf~ 116 (314)
..+|=...+...-+-|++||+|-.+..+ +..+.+
T Consensus 74 ------~~arN~gl~~a~g~yi~flD~DD~~~p~~l~~l~~ 108 (328)
T PRK10073 74 ------SVARNTGLAVATGKYVAFPDADDVVYPTMYETLMT 108 (328)
T ss_pred ------HHHHHHHHHhCCCCEEEEECCCCccChhHHHHHHH
Confidence 1122222233456889999999988765 333443
No 49
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=69.97 E-value=13 Score=29.30 Aligned_cols=87 Identities=15% Similarity=0.085 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHcCCEE-EEecccCCCCchhhhhhcccccccchhhhccccccc
Q 037698 19 KGVVGLVKGLRKAK-SAYPLAVAVLPDVPADHRKILVSQGCIV-REIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYA 96 (314)
Q Consensus 19 ~~~~vl~~SL~~~~-~~~~ivvlv~~~ls~~~~~~L~~~~~~v-~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~yd 96 (314)
..+..++.||+... +...++ +++++-+++..+.+++..... ..+..+...++.. ..-.+-...+....+
T Consensus 10 ~~l~~~l~sl~~q~~~~~~ii-vvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~g--------~~~~~n~~~~~~~~~ 80 (180)
T cd06423 10 AVIERTIESLLALDYPKLEVI-VVDDGSTDDTLEILEELAALYIRRVLVVRDKENGG--------KAGALNAGLRHAKGD 80 (180)
T ss_pred HHHHHHHHHHHhCCCCceEEE-EEeCCCccchHHHHHHHhccccceEEEEEecccCC--------chHHHHHHHHhcCCC
Confidence 56677788888654 344444 566666666666666543211 0011111111110 011122223334788
Q ss_pred eEEEEecCeeeccC-chhh
Q 037698 97 KMIYLDGDIQVFEN-IDHL 114 (314)
Q Consensus 97 rvlYLD~D~lv~~d-ideL 114 (314)
-|+++|+|.++..+ +..+
T Consensus 81 ~i~~~D~D~~~~~~~l~~~ 99 (180)
T cd06423 81 IVVVLDADTILEPDALKRL 99 (180)
T ss_pred EEEEECCCCCcChHHHHHH
Confidence 99999999998776 3444
No 50
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=66.07 E-value=26 Score=28.65 Aligned_cols=85 Identities=5% Similarity=0.010 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhccccccce
Q 037698 19 KGVVGLVKGLRKAK-SAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAK 97 (314)
Q Consensus 19 ~~~~vl~~SL~~~~-~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~ydr 97 (314)
..+..++.||.+.. ++..+ ++++++-+++..+.+++....++.+.. .+ +.. . ...+-...+....+-
T Consensus 11 ~~l~~~l~sl~~q~~~~~ev-ivvDd~s~d~~~~~~~~~~~~~~~~~~--~~-~~g-~-------~~a~n~~~~~a~~~~ 78 (202)
T cd06433 11 ETLEETIDSVLSQTYPNIEY-IVIDGGSTDGTVDIIKKYEDKITYWIS--EP-DKG-I-------YDAMNKGIALATGDI 78 (202)
T ss_pred HHHHHHHHHHHhCCCCCceE-EEEeCCCCccHHHHHHHhHhhcEEEEe--cC-CcC-H-------HHHHHHHHHHcCCCE
Confidence 56677788887543 33443 456666666666777665443222211 11 110 1 111222233346789
Q ss_pred EEEEecCeeeccC-chhhh
Q 037698 98 MIYLDGDIQVFEN-IDHLF 115 (314)
Q Consensus 98 vlYLD~D~lv~~d-ideLf 115 (314)
|++||+|.++..+ +..+.
T Consensus 79 v~~ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 79 IGFLNSDDTLLPGALLAVV 97 (202)
T ss_pred EEEeCCCcccCchHHHHHH
Confidence 9999999988765 55554
No 51
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=65.62 E-value=12 Score=31.45 Aligned_cols=36 Identities=6% Similarity=0.063 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhc-CCCCcEEEEECCCCCHHHHHHHHH
Q 037698 19 KGVVGLVKGLRKA-KSAYPLAVAVLPDVPADHRKILVS 55 (314)
Q Consensus 19 ~~~~vl~~SL~~~-~~~~~ivvlv~~~ls~~~~~~L~~ 55 (314)
..+..++.||.+. .+.+.++ +|+++-+++..+.+++
T Consensus 14 ~~l~~~L~sl~~q~~~~~eii-vVdd~s~d~t~~~~~~ 50 (196)
T cd02520 14 PNLYENLESFFQQDYPKYEIL-FCVQDEDDPAIPVVRK 50 (196)
T ss_pred ccHHHHHHHHHhccCCCeEEE-EEeCCCcchHHHHHHH
Confidence 3466778888764 3445555 4556655555555554
No 52
>PRK11204 N-glycosyltransferase; Provisional
Probab=65.10 E-value=15 Score=34.98 Aligned_cols=83 Identities=16% Similarity=0.112 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhc-CCCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhccccccce
Q 037698 19 KGVVGLVKGLRKA-KSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAK 97 (314)
Q Consensus 19 ~~~~vl~~SL~~~-~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~ydr 97 (314)
..+.-++.|+.+. .++++++ +++++-+++..+.+++...+...+..+..+++.. ... +.=...+..++|-
T Consensus 67 ~~i~~~l~sl~~q~yp~~eii-VvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n~G-ka~-------aln~g~~~a~~d~ 137 (420)
T PRK11204 67 ENVEETISHLLALRYPNYEVI-AINDGSSDNTGEILDRLAAQIPRLRVIHLAENQG-KAN-------ALNTGAAAARSEY 137 (420)
T ss_pred HHHHHHHHHHHhCCCCCeEEE-EEECCCCccHHHHHHHHHHhCCcEEEEEcCCCCC-HHH-------HHHHHHHHcCCCE
Confidence 4566677887754 3444444 5666666555555554321111122222111111 000 0011112346899
Q ss_pred EEEEecCeeeccC
Q 037698 98 MIYLDGDIQVFEN 110 (314)
Q Consensus 98 vlYLD~D~lv~~d 110 (314)
++.+|+|.++-.+
T Consensus 138 i~~lDaD~~~~~d 150 (420)
T PRK11204 138 LVCIDGDALLDPD 150 (420)
T ss_pred EEEECCCCCCChh
Confidence 9999999988765
No 53
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=64.49 E-value=33 Score=28.90 Aligned_cols=77 Identities=16% Similarity=0.151 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhccccccc
Q 037698 18 VKGVVGLVKGLRKAK-SAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYA 96 (314)
Q Consensus 18 l~~~~vl~~SL~~~~-~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~yd 96 (314)
-..+.-++.||.... +...+ ++++++-+++..+.+++.+..+. . .+.. .. ..+-...+....+
T Consensus 11 ~~~l~~~l~sl~~q~~~~~ev-ivvdd~s~d~~~~~~~~~~~~~~--~---~~~g---~~-------~a~n~g~~~a~~~ 74 (221)
T cd02522 11 AENLPRLLASLRRLNPLPLEI-IVVDGGSTDGTVAIARSAGVVVI--S---SPKG---RA-------RQMNAGAAAARGD 74 (221)
T ss_pred HHHHHHHHHHHHhccCCCcEE-EEEeCCCCccHHHHHhcCCeEEE--e---CCcC---HH-------HHHHHHHHhccCC
Confidence 345677788888654 33444 45666666666666666332222 1 1111 00 1111222233478
Q ss_pred eEEEEecCeeeccC
Q 037698 97 KMIYLDGDIQVFEN 110 (314)
Q Consensus 97 rvlYLD~D~lv~~d 110 (314)
-|+++|+|..+..+
T Consensus 75 ~i~~~D~D~~~~~~ 88 (221)
T cd02522 75 WLLFLHADTRLPPD 88 (221)
T ss_pred EEEEEcCCCCCChh
Confidence 99999999988654
No 54
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=63.01 E-value=41 Score=28.54 Aligned_cols=82 Identities=10% Similarity=-0.015 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhcC-CC--CcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhccccccc
Q 037698 20 GVVGLVKGLRKAK-SA--YPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYA 96 (314)
Q Consensus 20 ~~~vl~~SL~~~~-~~--~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~yd 96 (314)
.+..++.||+... +. +.++ +++++-+++..+.+++.+... .+..+..+.+.. .+ ....-...+....|
T Consensus 16 ~l~~~l~sl~~q~~~~~~~eii-vvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~~~~-~~------~~~~n~~~~~a~~d 86 (234)
T cd06421 16 IVRKTLRAALAIDYPHDKLRVY-VLDDGRRPELRALAAELGVEY-GYRYLTRPDNRH-AK------AGNLNNALAHTTGD 86 (234)
T ss_pred HHHHHHHHHHhcCCCcccEEEE-EEcCCCchhHHHHHHHhhccc-CceEEEeCCCCC-Cc------HHHHHHHHHhCCCC
Confidence 4567788888543 33 3444 567776777777777765421 111111111100 00 00111222334789
Q ss_pred eEEEEecCeeeccC
Q 037698 97 KMIYLDGDIQVFEN 110 (314)
Q Consensus 97 rvlYLD~D~lv~~d 110 (314)
-|++||+|.++-.+
T Consensus 87 ~i~~lD~D~~~~~~ 100 (234)
T cd06421 87 FVAILDADHVPTPD 100 (234)
T ss_pred EEEEEccccCcCcc
Confidence 99999999998653
No 55
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=62.68 E-value=18 Score=32.62 Aligned_cols=87 Identities=10% Similarity=0.048 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHhcCCCC-c-EEEEECCCCCHHHHHHHHH-----cCCEEEEecccCCCCchhhhhhcccccccchhhhcc
Q 037698 19 KGVVGLVKGLRKAKSAY-P-LAVAVLPDVPADHRKILVS-----QGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWE 91 (314)
Q Consensus 19 ~~~~vl~~SL~~~~~~~-~-ivvlv~~~ls~~~~~~L~~-----~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~ 91 (314)
..+..++.||....+.. . =+|+|+++-++.....+.+ ....+. .+..+.+. .+. -.+-...+
T Consensus 12 ~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~---vi~~~~n~-G~~-------~a~N~g~~ 80 (299)
T cd02510 12 STLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVK---VLRLKKRE-GLI-------RARIAGAR 80 (299)
T ss_pred HHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEE---EEEcCCCC-CHH-------HHHHHHHH
Confidence 67778899998764422 1 2446777665555554432 111222 22222111 111 11112222
Q ss_pred ccccceEEEEecCeeeccC-chhhhc
Q 037698 92 FVEYAKMIYLDGDIQVFEN-IDHLFE 116 (314)
Q Consensus 92 l~~ydrvlYLD~D~lv~~d-ideLf~ 116 (314)
....+-|++||+|+.+..+ |..|.+
T Consensus 81 ~A~gd~i~fLD~D~~~~~~wL~~ll~ 106 (299)
T cd02510 81 AATGDVLVFLDSHCEVNVGWLEPLLA 106 (299)
T ss_pred HccCCEEEEEeCCcccCccHHHHHHH
Confidence 3457999999999998643 344444
No 56
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=60.58 E-value=23 Score=33.55 Aligned_cols=22 Identities=18% Similarity=0.231 Sum_probs=16.3
Q ss_pred cceEEEEecCeeeccC-chhhhc
Q 037698 95 YAKMIYLDGDIQVFEN-IDHLFE 116 (314)
Q Consensus 95 ydrvlYLD~D~lv~~d-ideLf~ 116 (314)
.|-++++|+|+.+-.+ +..+.+
T Consensus 134 gd~llflDaD~~~~p~~l~~lv~ 156 (384)
T TIGR03469 134 ADYLLLTDADIAHGPDNLARLVA 156 (384)
T ss_pred CCEEEEECCCCCCChhHHHHHHH
Confidence 7999999999997553 344443
No 57
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=59.34 E-value=15 Score=31.15 Aligned_cols=86 Identities=17% Similarity=0.232 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhcC--CCCcEEEEECCCCCHHHHHHHHHc---CCEEEEecccCCCCchhhhhhcccccccchhhhcccc
Q 037698 19 KGVVGLVKGLRKAK--SAYPLAVAVLPDVPADHRKILVSQ---GCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFV 93 (314)
Q Consensus 19 ~~~~vl~~SL~~~~--~~~~ivvlv~~~ls~~~~~~L~~~---~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~ 93 (314)
..+..++.||.... .... +++|+++-++...+.+++. ...+. .+....+.. . ..++-...+..
T Consensus 10 ~~l~~~l~sl~~q~~~~~~e-iiiVDd~S~d~t~~~~~~~~~~~~~i~---~~~~~~n~G-~-------~~a~n~g~~~a 77 (224)
T cd06442 10 ENIPELIERLDAALKGIDYE-IIVVDDNSPDGTAEIVRELAKEYPRVR---LIVRPGKRG-L-------GSAYIEGFKAA 77 (224)
T ss_pred hhHHHHHHHHHHhhcCCCeE-EEEEeCCCCCChHHHHHHHHHhCCceE---EEecCCCCC-h-------HHHHHHHHHHc
Confidence 34566777777543 3333 3456666555554444443 22221 111111111 0 11112222233
Q ss_pred ccceEEEEecCeeeccC-chhhhc
Q 037698 94 EYAKMIYLDGDIQVFEN-IDHLFE 116 (314)
Q Consensus 94 ~ydrvlYLD~D~lv~~d-ideLf~ 116 (314)
.-|-|++||+|.++..+ +..+.+
T Consensus 78 ~gd~i~~lD~D~~~~~~~l~~l~~ 101 (224)
T cd06442 78 RGDVIVVMDADLSHPPEYIPELLE 101 (224)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHH
Confidence 45889999999887543 334443
No 58
>PRK10063 putative glycosyl transferase; Provisional
Probab=57.75 E-value=56 Score=28.81 Aligned_cols=83 Identities=13% Similarity=0.147 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHhc----CCCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhcccc
Q 037698 18 VKGVVGLVKGLRKA----KSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFV 93 (314)
Q Consensus 18 l~~~~vl~~SL~~~----~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~ 93 (314)
...+.-++.||... ..+.. +++++++-++...+.+++..... .+..+..+ +. .+.. ++=...+..
T Consensus 13 ~~~l~~~l~sl~~~~~~~~~~~E-iIVvDdgStD~t~~i~~~~~~~~-~i~~i~~~-~~-G~~~-------A~N~Gi~~a 81 (248)
T PRK10063 13 LEGIVKTHASLRHLAQDPGISFE-WIVVDGGSNDGTREFLENLNGIF-NLRFVSEP-DN-GIYD-------AMNKGIAMA 81 (248)
T ss_pred HHHHHHHHHHHHHHHhCCCCCEE-EEEEECcCcccHHHHHHHhcccC-CEEEEECC-CC-CHHH-------HHHHHHHHc
Confidence 44556666676532 22333 44667777777777787754211 11222111 11 1111 111111223
Q ss_pred ccceEEEEecCeeeccCc
Q 037698 94 EYAKMIYLDGDIQVFENI 111 (314)
Q Consensus 94 ~ydrvlYLD~D~lv~~di 111 (314)
..+-|++||+|-++..+.
T Consensus 82 ~g~~v~~ld~DD~~~~~~ 99 (248)
T PRK10063 82 QGRFALFLNSGDIFHQDA 99 (248)
T ss_pred CCCEEEEEeCCcccCcCH
Confidence 568999999998887764
No 59
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=56.77 E-value=74 Score=27.17 Aligned_cols=19 Identities=11% Similarity=0.053 Sum_probs=15.8
Q ss_pred ccccceEEEEecCeeeccC
Q 037698 92 FVEYAKMIYLDGDIQVFEN 110 (314)
Q Consensus 92 l~~ydrvlYLD~D~lv~~d 110 (314)
...++-|+++|+|+++-.+
T Consensus 85 ~a~~~~i~~~DaD~~~~~~ 103 (232)
T cd06437 85 VAKGEYVAIFDADFVPPPD 103 (232)
T ss_pred hCCCCEEEEEcCCCCCChH
Confidence 4478999999999998654
No 60
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=56.54 E-value=46 Score=27.52 Aligned_cols=82 Identities=10% Similarity=0.024 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEECCCC-CHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhccccccc
Q 037698 19 KGVVGLVKGLRKAK-SAYPLAVAVLPDV-PADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYA 96 (314)
Q Consensus 19 ~~~~vl~~SL~~~~-~~~~ivvlv~~~l-s~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~yd 96 (314)
..+.-++.||.... +...++ ++.++- ++...+.+++...... +..+..+.+. .. ...+-......+.+
T Consensus 13 ~~l~~~l~Sl~~q~~~~~eii-ivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~n~-G~-------~~a~N~g~~~a~gd 82 (201)
T cd04195 13 EFLREALESILKQTLPPDEVV-LVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEKNR-GL-------GKALNEGLKHCTYD 82 (201)
T ss_pred HHHHHHHHHHHhcCCCCcEEE-EEECCCCchhHHHHHHHHHhcCC-eEEEEcCccc-cH-------HHHHHHHHHhcCCC
Confidence 35667788887653 334444 555554 4444444444311110 1112111111 11 11222333345678
Q ss_pred eEEEEecCeeeccC
Q 037698 97 KMIYLDGDIQVFEN 110 (314)
Q Consensus 97 rvlYLD~D~lv~~d 110 (314)
-|++||+|.++..+
T Consensus 83 ~i~~lD~Dd~~~~~ 96 (201)
T cd04195 83 WVARMDTDDISLPD 96 (201)
T ss_pred EEEEeCCccccCcH
Confidence 89999999987653
No 61
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=56.33 E-value=16 Score=29.88 Aligned_cols=89 Identities=16% Similarity=0.130 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhcCC---CCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhcccccc
Q 037698 19 KGVVGLVKGLRKAKS---AYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEY 95 (314)
Q Consensus 19 ~~~~vl~~SL~~~~~---~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~y 95 (314)
..+.-++.|+.+... .+. ++++.++-++...+.+++.+.....+..+..+++.. ....+-...+...-
T Consensus 10 ~~l~~~l~sl~~~~~~~~~~e-iivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~G--------~~~a~n~g~~~a~g 80 (185)
T cd04179 10 ENIPELVERLLAVLEEGYDYE-IIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNFG--------KGAAVRAGFKAARG 80 (185)
T ss_pred hhHHHHHHHHHHHhccCCCEE-EEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCCC--------ccHHHHHHHHHhcC
Confidence 445667777776532 344 335666555555666665433222212222221111 01122222233344
Q ss_pred ceEEEEecCeeeccC-chhhhc
Q 037698 96 AKMIYLDGDIQVFEN-IDHLFE 116 (314)
Q Consensus 96 drvlYLD~D~lv~~d-ideLf~ 116 (314)
|-|++||+|..+..+ ++.|..
T Consensus 81 d~i~~lD~D~~~~~~~l~~l~~ 102 (185)
T cd04179 81 DIVVTMDADLQHPPEDIPKLLE 102 (185)
T ss_pred CEEEEEeCCCCCCHHHHHHHHH
Confidence 889999999887665 556665
No 62
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=55.56 E-value=36 Score=27.14 Aligned_cols=87 Identities=11% Similarity=0.082 Sum_probs=46.3
Q ss_pred cccHHHHHHHHHHHHhcCC-CCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhcccc
Q 037698 15 GDYVKGVVGLVKGLRKAKS-AYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFV 93 (314)
Q Consensus 15 ~~Yl~~~~vl~~SL~~~~~-~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~ 93 (314)
.+.-..+..++.|+..... ... +++++++-++...+.+++.......+.......+. ....++-......
T Consensus 12 ~n~~~~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~ 82 (291)
T COG0463 12 YNEEEYLPEALESLLNQTYKDFE-IIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERNG--------GLGAARNAGLEYA 82 (291)
T ss_pred cchhhhHHHHHHHHHhhhhcceE-EEEEeCCCCCChHHHHHHHhhhcceEEEeecccCC--------ChHHHHHhhHHhc
Confidence 3444778888889886543 234 55777777766666666554332111111111111 1122233333333
Q ss_pred ccceEEEEecCeeeccCc
Q 037698 94 EYAKMIYLDGDIQVFENI 111 (314)
Q Consensus 94 ~ydrvlYLD~D~lv~~di 111 (314)
.-+-|+++|+|.+ ..+-
T Consensus 83 ~~~~~~~~d~d~~-~~~~ 99 (291)
T COG0463 83 RGDYIVFLDADDQ-HPPE 99 (291)
T ss_pred cCCEEEEEccCCC-CCHH
Confidence 3399999999998 6543
No 63
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=54.60 E-value=33 Score=28.50 Aligned_cols=85 Identities=14% Similarity=0.069 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHhc-CCCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhccccccce
Q 037698 19 KGVVGLVKGLRKA-KSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAK 97 (314)
Q Consensus 19 ~~~~vl~~SL~~~-~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~ydr 97 (314)
..+.-++.||.+. .+...+ ++++++-++...+.+++.+.... +..+..+++.. ..... ...+ +... ..++|-
T Consensus 10 ~~l~~~l~sl~~q~~~~~ei-iivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~n~g-~~~~~-n~~~-~~a~--~~~~d~ 82 (202)
T cd04185 10 DLLKECLDALLAQTRPPDHI-IVIDNASTDGTAEWLTSLGDLDN-IVYLRLPENLG-GAGGF-YEGV-RRAY--ELGYDW 82 (202)
T ss_pred HHHHHHHHHHHhccCCCceE-EEEECCCCcchHHHHHHhcCCCc-eEEEECccccc-hhhHH-HHHH-HHHh--ccCCCE
Confidence 4466777888754 333444 46666666666677776554321 22222222111 00000 0000 1111 236899
Q ss_pred EEEEecCeeeccC
Q 037698 98 MIYLDGDIQVFEN 110 (314)
Q Consensus 98 vlYLD~D~lv~~d 110 (314)
+++||+|.++..+
T Consensus 83 v~~ld~D~~~~~~ 95 (202)
T cd04185 83 IWLMDDDAIPDPD 95 (202)
T ss_pred EEEeCCCCCcChH
Confidence 9999999998754
No 64
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=53.00 E-value=59 Score=29.44 Aligned_cols=77 Identities=14% Similarity=0.221 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCc-hhhhhhc----ccccccchhhhccccc
Q 037698 20 GVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPEN-QTQFAMA----YYVINYSKLRIWEFVE 94 (314)
Q Consensus 20 ~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~-~~~~~~~----~~~~~y~KL~i~~l~~ 94 (314)
-+..++.|++++.+++++++ ++.+ .+++ . +..|+. ...+... -..+-+.|+.+-. .
T Consensus 62 ~Vk~ci~s~~k~~~~~~Vi~-lt~~-------Ni~~----Y-----v~~P~~i~~k~~~g~i~~a~~SDilR~~LL~--~ 122 (276)
T PF05704_consen 62 IVKKCINSWRKNAPDYEVIL-LTED-------NIKD----Y-----VDIPDFILEKYEKGKISPAHFSDILRLALLY--K 122 (276)
T ss_pred HHHHHHHHHHHHCCCCeEEE-EChH-------HHHH----H-----cCCchhHHHHHHcCCCchhHHHHHHHHHHHH--H
Confidence 35788999999999888774 4431 1111 0 011100 0001000 0012244655432 2
Q ss_pred cceEEEEecCeeeccCchhhhc
Q 037698 95 YAKMIYLDGDIQVFENIDHLFE 116 (314)
Q Consensus 95 ydrvlYLD~D~lv~~dideLf~ 116 (314)
|. =+|+||++++.+++++.+.
T Consensus 123 yG-GvWiDatv~~t~~l~~~~~ 143 (276)
T PF05704_consen 123 YG-GVWIDATVYLTKPLDDEIF 143 (276)
T ss_pred cC-cEEeCCceEECCchhHHHh
Confidence 22 2799999999999998765
No 65
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=52.91 E-value=73 Score=27.42 Aligned_cols=76 Identities=13% Similarity=0.112 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhccccccceE
Q 037698 19 KGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKM 98 (314)
Q Consensus 19 ~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~ydrv 98 (314)
..+..++.||.... .. +++++++-++...+.+++.+.+++.. ... .+. ..|=...+....+-|
T Consensus 13 ~~l~~~l~sl~~~~--~e-iivvD~gStD~t~~i~~~~~~~v~~~---~~~----g~~-------~~~n~~~~~a~~d~v 75 (229)
T cd02511 13 RNIERCLESVKWAV--DE-IIVVDSGSTDRTVEIAKEYGAKVYQR---WWD----GFG-------AQRNFALELATNDWV 75 (229)
T ss_pred HHHHHHHHHHhccc--CE-EEEEeCCCCccHHHHHHHcCCEEEEC---CCC----ChH-------HHHHHHHHhCCCCEE
Confidence 45566777886432 23 44677777777778888877776543 111 111 112222233456799
Q ss_pred EEEecCeeeccCc
Q 037698 99 IYLDGDIQVFENI 111 (314)
Q Consensus 99 lYLD~D~lv~~di 111 (314)
++||+|.++..+.
T Consensus 76 l~lDaD~~~~~~~ 88 (229)
T cd02511 76 LSLDADERLTPEL 88 (229)
T ss_pred EEEeCCcCcCHHH
Confidence 9999999987653
No 66
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=51.74 E-value=44 Score=28.09 Aligned_cols=19 Identities=21% Similarity=0.081 Sum_probs=15.4
Q ss_pred ccccceEEEEecCeeeccC
Q 037698 92 FVEYAKMIYLDGDIQVFEN 110 (314)
Q Consensus 92 l~~ydrvlYLD~D~lv~~d 110 (314)
....|-|+++|+|.++..+
T Consensus 80 ~~~~d~i~~~D~D~~~~~~ 98 (229)
T cd04192 80 AAKGDWIVTTDADCVVPSN 98 (229)
T ss_pred HhcCCEEEEECCCcccCHH
Confidence 3468999999999988653
No 67
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=51.34 E-value=86 Score=25.66 Aligned_cols=80 Identities=19% Similarity=0.205 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhcCC---CCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhcc----
Q 037698 19 KGVVGLVKGLRKAKS---AYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWE---- 91 (314)
Q Consensus 19 ~~~~vl~~SL~~~~~---~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~---- 91 (314)
..+..++.|+.+... .+.++ ++.++-+++..+.+++.+..+.... .+.+.. . .+..-....
T Consensus 10 ~~i~~~l~sl~~~~~p~~~~eii-vvdd~s~D~t~~~~~~~~~~~~~~~---~~~~~g---k-----~~aln~g~~~a~~ 77 (183)
T cd06438 10 AVIGNTVRSLKAQDYPRELYRIF-VVADNCTDDTAQVARAAGATVLERH---DPERRG---K-----GYALDFGFRHLLN 77 (183)
T ss_pred HHHHHHHHHHHhcCCCCcccEEE-EEeCCCCchHHHHHHHcCCeEEEeC---CCCCCC---H-----HHHHHHHHHHHHh
Confidence 345667778875432 23344 5567767777788877766543221 111110 0 011101111
Q ss_pred -ccccceEEEEecCeeeccC
Q 037698 92 -FVEYAKMIYLDGDIQVFEN 110 (314)
Q Consensus 92 -l~~ydrvlYLD~D~lv~~d 110 (314)
-..+|-|+++|+|+++-.+
T Consensus 78 ~~~~~d~v~~~DaD~~~~p~ 97 (183)
T cd06438 78 LADDPDAVVVFDADNLVDPN 97 (183)
T ss_pred cCCCCCEEEEEcCCCCCChh
Confidence 1258899999999998643
No 68
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=50.63 E-value=1e+02 Score=28.84 Aligned_cols=99 Identities=16% Similarity=0.207 Sum_probs=48.4
Q ss_pred cHHHHHHHHHHHHhcC-C--CCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCC-chh---hhhhcccccc---cch
Q 037698 17 YVKGVVGLVKGLRKAK-S--AYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPE-NQT---QFAMAYYVIN---YSK 86 (314)
Q Consensus 17 Yl~~~~vl~~SL~~~~-~--~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~-~~~---~~~~~~~~~~---y~K 86 (314)
-...+.-++.||++.. + ..+++ +..|+-.++..+.++..+..+..+...+... +.. .+...+..+. ++.
T Consensus 11 Rp~~l~r~LesLl~~~p~~~~~~li-Is~DG~~~~~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~ia~hyk~al 89 (334)
T cd02514 11 RPDYLRRMLDSLLSYRPSAEKFPII-VSQDGGYEEVADVAKSFGDGVTHIQHPPISIKNVNPPHKFQGYYRIARHYKWAL 89 (334)
T ss_pred CHHHHHHHHHHHHhccccCCCceEE-EEeCCCchHHHHHHHhhccccEEEEcccccccccCcccccchhhHHHHHHHHHH
Confidence 4556777788888764 2 34455 4456655555566665532222222211110 000 0000000011 111
Q ss_pred hhhccccccceEEEEecCeeeccCchhhhc
Q 037698 87 LRIWEFVEYAKMIYLDGDIQVFENIDHLFE 116 (314)
Q Consensus 87 L~i~~l~~ydrvlYLD~D~lv~~dideLf~ 116 (314)
=.+++...+++||.|+.|+++-.+.=+.|+
T Consensus 90 n~vF~~~~~~~vIILEDDl~~sPdFf~yf~ 119 (334)
T cd02514 90 TQTFNLFGYSFVIILEDDLDIAPDFFSYFQ 119 (334)
T ss_pred HHHHHhcCCCEEEEECCCCccCHhHHHHHH
Confidence 122233369999999999999988554443
No 69
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=49.53 E-value=56 Score=27.10 Aligned_cols=90 Identities=11% Similarity=0.014 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHcCCEE-EEecccCCCCchhhhhhcccccccchhhhccccccc
Q 037698 19 KGVVGLVKGLRKAK-SAYPLAVAVLPDVPADHRKILVSQGCIV-REIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYA 96 (314)
Q Consensus 19 ~~~~vl~~SL~~~~-~~~~ivvlv~~~ls~~~~~~L~~~~~~v-~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~yd 96 (314)
..+.-++.||.... ++..++ +++++-+++..+.+++..... ..+..+....+.. ... .+ -........+
T Consensus 11 ~~l~~~l~sl~~q~~~~~eii-VvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~G-~~~-----~~--n~g~~~~~g~ 81 (214)
T cd04196 11 KYLREQLDSILAQTYKNDELI-ISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNLG-VAR-----NF--ESLLQAADGD 81 (214)
T ss_pred HHHHHHHHHHHhCcCCCeEEE-EEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCcc-HHH-----HH--HHHHHhCCCC
Confidence 45567788887643 334444 566665555555555543221 1111111111111 000 01 1112334689
Q ss_pred eEEEEecCeeeccC-chhhhcC
Q 037698 97 KMIYLDGDIQVFEN-IDHLFEL 117 (314)
Q Consensus 97 rvlYLD~D~lv~~d-ideLf~~ 117 (314)
-|++||+|.++..+ |..+.+.
T Consensus 82 ~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 82 YVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred EEEEECCCcccChhHHHHHHHH
Confidence 99999999888765 6666664
No 70
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=48.98 E-value=59 Score=26.30 Aligned_cols=81 Identities=9% Similarity=0.140 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHcC----CEEEEecccCCCCchhhhhhcccccccchhhhcccc
Q 037698 19 KGVVGLVKGLRKAK-SAYPLAVAVLPDVPADHRKILVSQG----CIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFV 93 (314)
Q Consensus 19 ~~~~vl~~SL~~~~-~~~~ivvlv~~~ls~~~~~~L~~~~----~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~ 93 (314)
..+.-++.||.+.. .+..++ +++++-++...+.+++.. ..++.+ ...+.. +.. ...+=...+..
T Consensus 10 ~~l~~~l~sl~~q~~~~~eii-vvdd~s~d~t~~~~~~~~~~~~~~~~~~--~~~~~~---~~~-----~~~~n~g~~~a 78 (182)
T cd06420 10 EALELVLKSVLNQSILPFEVI-IADDGSTEETKELIEEFKSQFPIPIKHV--WQEDEG---FRK-----AKIRNKAIAAA 78 (182)
T ss_pred HHHHHHHHHHHhccCCCCEEE-EEeCCCchhHHHHHHHHHhhcCCceEEE--EcCCcc---hhH-----HHHHHHHHHHh
Confidence 45667788887653 344444 556665555555555432 122222 111111 100 11122233345
Q ss_pred ccceEEEEecCeeeccC
Q 037698 94 EYAKMIYLDGDIQVFEN 110 (314)
Q Consensus 94 ~ydrvlYLD~D~lv~~d 110 (314)
..+-|++||+|.++..+
T Consensus 79 ~g~~i~~lD~D~~~~~~ 95 (182)
T cd06420 79 KGDYLIFIDGDCIPHPD 95 (182)
T ss_pred cCCEEEEEcCCcccCHH
Confidence 67999999999988655
No 71
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=48.36 E-value=60 Score=29.90 Aligned_cols=99 Identities=15% Similarity=0.025 Sum_probs=57.6
Q ss_pred CeEEEEEeeeCcccHH-HHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHH----------c-CCEEEEecccCCCCc
Q 037698 4 KRAYVTFLAGNGDYVK-GVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVS----------Q-GCIVREIQPVYPPEN 71 (314)
Q Consensus 4 ~~A~vT~l~~d~~Yl~-~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~----------~-~~~v~~i~~i~~~~~ 71 (314)
+.+++|.+-++.+.+. +..+.-.|. ....++++ +|+.+.+ .|++ . .++++.|+.+...
T Consensus 64 ~vvV~saIFG~yD~l~qP~~i~~~s~----~~vcf~mF-~D~~t~~---~l~~~~~~~~~~~~ig~WrIv~v~~lp~~-- 133 (305)
T PF04765_consen 64 RVVVYSAIFGNYDKLRQPKNISEYSK----KNVCFFMF-VDEETLK---SLESEGHIPDENKKIGIWRIVVVKNLPYD-- 133 (305)
T ss_pred CEEEEEEecCCCccccCchhhCHHHh----cCccEEEE-EehhhHH---HHHhcCCccccccccCceEEEEecCCCCc--
Confidence 4566676656655553 333222222 23455544 4555543 3332 1 2567766544211
Q ss_pred hhhhhhcccccccchhhhcccc-ccceEEEEecCeeeccCchhhhcC
Q 037698 72 QTQFAMAYYVINYSKLRIWEFV-EYAKMIYLDGDIQVFENIDHLFEL 117 (314)
Q Consensus 72 ~~~~~~~~~~~~y~KL~i~~l~-~ydrvlYLD~D~lv~~dideLf~~ 117 (314)
.++-...+.|++.-.+. +|+--||+|+-+-+++|+..|.+.
T Consensus 134 -----d~rr~~r~~K~lpHrlfp~y~ySIWID~ki~L~~Dp~~lie~ 175 (305)
T PF04765_consen 134 -----DPRRNGRIPKLLPHRLFPNYDYSIWIDGKIQLIVDPLLLIER 175 (305)
T ss_pred -----chhhcCcccceeccccCCCCceEEEEeeeEEEecCHHHHHHH
Confidence 11122357788887765 799999999999999999887764
No 72
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=46.04 E-value=41 Score=32.50 Aligned_cols=18 Identities=22% Similarity=0.383 Sum_probs=15.4
Q ss_pred cccceEEEEecCeeeccC
Q 037698 93 VEYAKMIYLDGDIQVFEN 110 (314)
Q Consensus 93 ~~ydrvlYLD~D~lv~~d 110 (314)
..+|-++.+|+|.++-.+
T Consensus 154 a~~d~iv~lDAD~~~~~d 171 (444)
T PRK14583 154 ARSEYLVCIDGDALLDKN 171 (444)
T ss_pred CCCCEEEEECCCCCcCHH
Confidence 468999999999998765
No 73
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=45.69 E-value=1.1e+02 Score=25.75 Aligned_cols=89 Identities=11% Similarity=0.079 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHhcC-C-CCcEEEEECCCCCHHHHHHHHHcC-----CEEEEeccc-CCCCchhhhhhcccccccchhhh
Q 037698 18 VKGVVGLVKGLRKAK-S-AYPLAVAVLPDVPADHRKILVSQG-----CIVREIQPV-YPPENQTQFAMAYYVINYSKLRI 89 (314)
Q Consensus 18 l~~~~vl~~SL~~~~-~-~~~ivvlv~~~ls~~~~~~L~~~~-----~~v~~i~~i-~~~~~~~~~~~~~~~~~y~KL~i 89 (314)
...+..++.||.... + ...+ ++++++-++...+.+++.. ..+..+..- ..+.+. ...++|-..
T Consensus 9 ~~~l~~~l~sl~~q~~~~~~ei-iVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--------G~~~a~N~g 79 (219)
T cd06913 9 EQWLDECLESVLQQDFEGTLEL-SVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSPSPK--------GVGYAKNQA 79 (219)
T ss_pred HHHHHHHHHHHHhCCCCCCEEE-EEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCCCCc--------cHHHHHHHH
Confidence 356667778887643 2 2343 4566665554444444421 112111100 011110 112334444
Q ss_pred ccccccceEEEEecCeeeccC-chhhh
Q 037698 90 WEFVEYAKMIYLDGDIQVFEN-IDHLF 115 (314)
Q Consensus 90 ~~l~~ydrvlYLD~D~lv~~d-ideLf 115 (314)
.+....|-+++||+|.++..+ +..++
T Consensus 80 ~~~a~gd~i~~lD~D~~~~~~~l~~~~ 106 (219)
T cd06913 80 IAQSSGRYLCFLDSDDVMMPQRIRLQY 106 (219)
T ss_pred HHhcCCCEEEEECCCccCChhHHHHHH
Confidence 455678999999999886654 44443
No 74
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=45.59 E-value=92 Score=28.54 Aligned_cols=89 Identities=11% Similarity=0.059 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhcCC---CCcEEEEECCCCCHHHHHHHHHcCCEEEEe-cccC-CCCchhhhhhcccccccchhhhcccc
Q 037698 19 KGVVGLVKGLRKAKS---AYPLAVAVLPDVPADHRKILVSQGCIVREI-QPVY-PPENQTQFAMAYYVINYSKLRIWEFV 93 (314)
Q Consensus 19 ~~~~vl~~SL~~~~~---~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i-~~i~-~~~~~~~~~~~~~~~~y~KL~i~~l~ 93 (314)
..+.-++.|+..... ... +++++++-++...+.+++.+.+++.. ..+. .+.+. .... +. .......
T Consensus 44 ~~I~~~l~sl~~~~~~~~~~E-IIVVDDgStD~T~~ia~~~~~~v~~~~~~~~~~~~n~-Gkg~-----A~--~~g~~~a 114 (306)
T PRK13915 44 ETVGKVVDSIRPLLMEPLVDE-LIVIDSGSTDATAERAAAAGARVVSREEILPELPPRP-GKGE-----AL--WRSLAAT 114 (306)
T ss_pred HHHHHHHHHHHHHhccCCCcE-EEEEeCCCccHHHHHHHHhcchhhcchhhhhccccCC-CHHH-----HH--HHHHHhc
Confidence 345566677765321 223 44677777777778888877654321 1110 01110 0000 11 1112234
Q ss_pred ccceEEEEecCee-e-ccCchhhhc
Q 037698 94 EYAKMIYLDGDIQ-V-FENIDHLFE 116 (314)
Q Consensus 94 ~ydrvlYLD~D~l-v-~~dideLf~ 116 (314)
..|-|+++|+|.. . -+.|..|..
T Consensus 115 ~gd~vv~lDaD~~~~~p~~l~~l~~ 139 (306)
T PRK13915 115 TGDIVVFVDADLINFDPMFVPGLLG 139 (306)
T ss_pred CCCEEEEEeCccccCCHHHHHHHHH
Confidence 6789999999986 3 233555543
No 75
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=44.01 E-value=39 Score=31.83 Aligned_cols=19 Identities=21% Similarity=0.242 Sum_probs=15.6
Q ss_pred ccccceEEEEecCeeeccC
Q 037698 92 FVEYAKMIYLDGDIQVFEN 110 (314)
Q Consensus 92 l~~ydrvlYLD~D~lv~~d 110 (314)
...+|-++++|+|+++-.+
T Consensus 124 ~a~ge~i~~~DaD~~~~p~ 142 (373)
T TIGR03472 124 HARHDILVIADSDISVGPD 142 (373)
T ss_pred hccCCEEEEECCCCCcChh
Confidence 3478999999999988654
No 76
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=43.35 E-value=74 Score=27.60 Aligned_cols=24 Identities=8% Similarity=0.203 Sum_probs=16.4
Q ss_pred cccceEEEEecCeeecc-Cchhhhc
Q 037698 93 VEYAKMIYLDGDIQVFE-NIDHLFE 116 (314)
Q Consensus 93 ~~ydrvlYLD~D~lv~~-dideLf~ 116 (314)
...+-|+++|+|..+.. .|..+++
T Consensus 92 a~g~~i~~lD~D~~~~~~~l~~l~~ 116 (243)
T PLN02726 92 ASGDFVVIMDADLSHHPKYLPSFIK 116 (243)
T ss_pred cCCCEEEEEcCCCCCCHHHHHHHHH
Confidence 45789999999987533 3344444
No 77
>PF01793 Glyco_transf_15: Glycolipid 2-alpha-mannosyltransferase; InterPro: IPR002685 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This entry represents a family of fungi mannosyl-transferases involved in N-linked and O-linked glycosylation of proteins. They belong to the glycosyltransferase family 15 (GT15 from CAZY). Some of the enzymes in this family have been shown to be involved in O- and N-linked glycan modifications in the Golgi [].; GO: 0000030 mannosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 1S4P_A 1S4O_A 1S4N_A.
Probab=42.17 E-value=81 Score=29.43 Aligned_cols=112 Identities=17% Similarity=0.281 Sum_probs=51.4
Q ss_pred CCeEEEEEeeeCcccHHHHHHHHHHHHhc-CC--CCcEEEEECCCCCHHHHHHHHHc-C--CEEEEec--ccCCCCch--
Q 037698 3 SKRAYVTFLAGNGDYVKGVVGLVKGLRKA-KS--AYPLAVAVLPDVPADHRKILVSQ-G--CIVREIQ--PVYPPENQ-- 72 (314)
Q Consensus 3 ~~~A~vT~l~~d~~Yl~~~~vl~~SL~~~-~~--~~~ivvlv~~~ls~~~~~~L~~~-~--~~v~~i~--~i~~~~~~-- 72 (314)
.+.|+|+ |+.|.. +.+++-+|+||-.. |. +||.|.|-...++++-++.+++. . +.+..|. ....|...
T Consensus 55 ~~Aafv~-LvrN~d-L~~~l~SI~~lE~rFN~kf~YpwvFlnd~pFteeFk~~i~~~~~~~v~F~~Ip~e~W~~P~~ID~ 132 (328)
T PF01793_consen 55 ENAAFVM-LVRNSD-LEGLLSSIRSLEDRFNKKFNYPWVFLNDEPFTEEFKEAISNATSGKVEFGLIPKEHWSYPDWIDQ 132 (328)
T ss_dssp --EEEEE-E--GGG-HHHHHHHHHHHHHHTTTTS---EEEEESS---HHHHHHHHHH-SS-EEEEE--GGGSS--TTS-H
T ss_pred CceEEEE-EEEchh-HHHHHHHHHHHHHHccCCCCCCEEEEeCCCCCHHHHHHHHHhhcCceEEEEeCHHHcCCCCcCCH
Confidence 4678888 555554 89999999999754 44 57888777777999988888764 2 2333332 22223211
Q ss_pred h-------hhhh---ccc-cc---ccchh------hhccccccceEEEEecCeeeccCch-hhhc
Q 037698 73 T-------QFAM---AYY-VI---NYSKL------RIWEFVEYAKMIYLDGDIQVFENID-HLFE 116 (314)
Q Consensus 73 ~-------~~~~---~~~-~~---~y~KL------~i~~l~~ydrvlYLD~D~lv~~did-eLf~ 116 (314)
. .+.. .+- .. ...|+ ..+.|.+||-.-=+++|+-+..||+ ++|.
T Consensus 133 ~~a~~~~~~~~~~~v~yg~s~sYr~McRf~SG~F~~hp~l~~ydyyWRvEP~v~~~Cdi~YD~F~ 197 (328)
T PF01793_consen 133 EKAAESREKMAEEGVPYGDSESYRHMCRFYSGFFYRHPLLQDYDYYWRVEPDVKFYCDIDYDPFR 197 (328)
T ss_dssp HHHHHHHHHHTT-TSTTTT-HHHHHHHHHHHHTGGGSGGGTT-SEEEE--TT-EE-S---S-HHH
T ss_pred HHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHhhhcChhhcCccEEEEeCCCceeecCCCCCHHH
Confidence 1 1110 000 00 11122 2233458999999999999999997 5664
No 78
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=41.82 E-value=18 Score=31.38 Aligned_cols=84 Identities=19% Similarity=0.231 Sum_probs=47.6
Q ss_pred ccccceEEEEecCeeeccCchhhhcC-CCCceecccchhcccCCCCCCcccccccccCCCCCCCCCCCCCCCCCcccceE
Q 037698 92 FVEYAKMIYLDGDIQVFENIDHLFEL-PNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMGSPPPKYFNAGM 170 (314)
Q Consensus 92 l~~ydrvlYLD~D~lv~~dideLf~~-~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g~~~~~yfNsGv 170 (314)
|.+++-||+||+||-|+.+=.-+=+. ++. + |...- ++.. ..-+.||-
T Consensus 39 L~~~~~vlflDaDigVvNp~~~iEefid~~-~----Di~fy------------------dR~~---------n~Ei~ags 86 (222)
T PF03314_consen 39 LPEYDWVLFLDADIGVVNPNRRIEEFIDEG-Y----DIIFY------------------DRFF---------NWEIAAGS 86 (222)
T ss_pred hccCCEEEEEcCCceeecCcccHHHhcCCC-C----cEEEE------------------eccc---------chhhhhcc
Confidence 34799999999999999763333222 211 0 10000 0110 12355777
Q ss_pred EEEecCHHHHHHHHHHHh-c--C-CCCCCCchhHHHHHHcc
Q 037698 171 FVYEPNLLTYSHLLETLK-V--T-PPSSFAEQDFLNNFFRN 207 (314)
Q Consensus 171 mli~~~~~~~~~ll~~~~-~--~-~~~~~~DQdiLN~~f~~ 207 (314)
-+++-+....+-+.++.. + . .++.+.|-++|-.++..
T Consensus 87 YlvkNT~~~~~fl~~~a~~E~~lP~sfhGtDNGAlH~~L~e 127 (222)
T PF03314_consen 87 YLVKNTEYSRDFLKEWADYEFKLPNSFHGTDNGALHIFLAE 127 (222)
T ss_pred ceeeCCHHHHHHHHHHhhhCccCCCccccCccHHHHHHHHH
Confidence 777777766555555543 1 1 23456888888877764
No 79
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=41.03 E-value=88 Score=25.75 Aligned_cols=81 Identities=14% Similarity=0.131 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHH-HHHHH---cCCEEEEecccCCCCchhhhhhcccccccchhhhccc
Q 037698 18 VKGVVGLVKGLRKAK-SAYPLAVAVLPDVPADHR-KILVS---QGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEF 92 (314)
Q Consensus 18 l~~~~vl~~SL~~~~-~~~~ivvlv~~~ls~~~~-~~L~~---~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l 92 (314)
+..+..++.||.... +...+ ++++++-++... ..++. ....+..+ ..+.+. .+ ...+-...+.
T Consensus 14 ~~~l~~~l~sl~~q~~~~~ei-ivvd~gs~d~~~~~~~~~~~~~~~~~~~~---~~~~~~-g~-------~~a~n~g~~~ 81 (202)
T cd04184 14 EKYLREAIESVRAQTYPNWEL-CIADDASTDPEVKRVLKKYAAQDPRIKVV---FREENG-GI-------SAATNSALEL 81 (202)
T ss_pred HHHHHHHHHHHHhCcCCCeEE-EEEeCCCCChHHHHHHHHHHhcCCCEEEE---EcccCC-CH-------HHHHHHHHHh
Confidence 567788889998643 33344 455555443322 22222 11222211 111111 11 1122233333
Q ss_pred cccceEEEEecCeeeccC
Q 037698 93 VEYAKMIYLDGDIQVFEN 110 (314)
Q Consensus 93 ~~ydrvlYLD~D~lv~~d 110 (314)
...+-++++|+|..+..+
T Consensus 82 a~~d~i~~ld~D~~~~~~ 99 (202)
T cd04184 82 ATGEFVALLDHDDELAPH 99 (202)
T ss_pred hcCCEEEEECCCCcCChH
Confidence 467899999999988654
No 80
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=39.84 E-value=60 Score=31.35 Aligned_cols=81 Identities=6% Similarity=-0.020 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhcC-CCCcE-EEEECCCCCHHHHHHHHH---cCCEEEEecccCCCCchhhhhhcccccccchhhhcccc
Q 037698 19 KGVVGLVKGLRKAK-SAYPL-AVAVLPDVPADHRKILVS---QGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFV 93 (314)
Q Consensus 19 ~~~~vl~~SL~~~~-~~~~i-vvlv~~~ls~~~~~~L~~---~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~ 93 (314)
..+.-++.|+.+.. +...+ +++++++-+++..+.+++ ....+. +..+.... .... +.=...+..
T Consensus 62 ~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~-v~~~~~~~---Gka~-------AlN~gl~~s 130 (439)
T TIGR03111 62 DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLS-LRYMNSDQ---GKAK-------ALNAAIYNS 130 (439)
T ss_pred HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeE-EEEeCCCC---CHHH-------HHHHHHHHc
Confidence 56677788887543 33223 456777777766555443 222221 11121111 0111 111111223
Q ss_pred ccceEEEEecCeeeccC
Q 037698 94 EYAKMIYLDGDIQVFEN 110 (314)
Q Consensus 94 ~ydrvlYLD~D~lv~~d 110 (314)
..+-|+.+|+|.++..+
T Consensus 131 ~g~~v~~~DaD~~~~~d 147 (439)
T TIGR03111 131 IGKYIIHIDSDGKLHKD 147 (439)
T ss_pred cCCEEEEECCCCCcChH
Confidence 45679999999998654
No 81
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=35.00 E-value=1.5e+02 Score=28.80 Aligned_cols=103 Identities=21% Similarity=0.324 Sum_probs=46.9
Q ss_pred EeeeCc-ccHHHHHHHHHHHHhcC---CCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCC-----CCchhhhhhccc
Q 037698 10 FLAGNG-DYVKGVVGLVKGLRKAK---SAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYP-----PENQTQFAMAYY 80 (314)
Q Consensus 10 ~l~~d~-~Yl~~~~vl~~SL~~~~---~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~-----~~~~~~~~~~~~ 80 (314)
++++|. .|+ .-++.||.++. ..+|++| ..++-.++..+.+++.+..+..|...+. +.....+...+-
T Consensus 99 V~AcNRp~yl---~r~L~sLl~~rp~~~~fpIiV-SQDg~~~~~~~vi~~y~~~v~~i~~~~~~~i~~~~~~~~~~~y~~ 174 (434)
T PF03071_consen 99 VFACNRPDYL---RRTLDSLLKYRPSAEKFPIIV-SQDGDDEEVAEVIKSYGDQVTYIQHPDFSPITIPPKEKKFKGYYK 174 (434)
T ss_dssp EEESS-TT-H---HHHHHHHHHH-S-TTTS-EEE-EE-TT-HHHHHHHHGGGGGSEEEE-S--S-----TT-GGGHHHHH
T ss_pred EEecCCcHHH---HHHHHHHHHcCCCCCCccEEE-EecCCcHHHHHHHHHhhhhheeeecCCcCCceeCcccccccchHH
Confidence 355653 444 45566666543 3456664 3355556667777777644433332211 100111111000
Q ss_pred ccccchhh---hccccccceEEEEecCeeeccCchhhhc
Q 037698 81 VINYSKLR---IWEFVEYAKMIYLDGDIQVFENIDHLFE 116 (314)
Q Consensus 81 ~~~y~KL~---i~~l~~ydrvlYLD~D~lv~~dideLf~ 116 (314)
.+.-+|.- ++....|++||.|.-|+.+--|.=+-|.
T Consensus 175 IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~ 213 (434)
T PF03071_consen 175 IARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFS 213 (434)
T ss_dssp HHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHH
Confidence 11122322 2222369999999999999888766665
No 82
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=32.56 E-value=1.4e+02 Score=27.16 Aligned_cols=95 Identities=16% Similarity=0.110 Sum_probs=53.9
Q ss_pred CcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHc-CCEEEEecccCCCCchhhhhhcccccccchhhhccc
Q 037698 14 NGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQ-GCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEF 92 (314)
Q Consensus 14 d~~Yl~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~-~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l 92 (314)
+-+....+..++.|+.........+++++++-++...+.++.. ...+. .+...++. .++. .+.+.....+
T Consensus 11 ~yn~~~~l~~~l~~l~~~~~~~~~iv~vDn~s~d~~~~~~~~~~~~~v~---~i~~~~Nl-G~ag-----g~n~g~~~a~ 81 (305)
T COG1216 11 TYNRGEDLVECLASLAAQTYPDDVIVVVDNGSTDGSLEALKARFFPNVR---LIENGENL-GFAG-----GFNRGIKYAL 81 (305)
T ss_pred ecCCHHHHHHHHHHHhcCCCCCcEEEEccCCCCCCCHHHHHhhcCCcEE---EEEcCCCc-cchh-----hhhHHHHHHh
Confidence 3566777888888888765544445466767677777777775 23333 23222221 1211 1222222222
Q ss_pred cc-cceEEEEecCeee-ccCchhhhcC
Q 037698 93 VE-YAKMIYLDGDIQV-FENIDHLFEL 117 (314)
Q Consensus 93 ~~-ydrvlYLD~D~lv-~~dideLf~~ 117 (314)
.+ ++-++.|+.|+++ -+.|.+|.+.
T Consensus 82 ~~~~~~~l~LN~D~~~~~~~l~~ll~~ 108 (305)
T COG1216 82 AKGDDYVLLLNPDTVVEPDLLEELLKA 108 (305)
T ss_pred cCCCcEEEEEcCCeeeChhHHHHHHHH
Confidence 23 3379999999777 3456677765
No 83
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=31.78 E-value=1.1e+02 Score=24.89 Aligned_cols=24 Identities=21% Similarity=0.248 Sum_probs=17.2
Q ss_pred ccceEEEEecCeeeccC-chhhhcC
Q 037698 94 EYAKMIYLDGDIQVFEN-IDHLFEL 117 (314)
Q Consensus 94 ~ydrvlYLD~D~lv~~d-ideLf~~ 117 (314)
..+-|+++|+|...-.+ +..+.+.
T Consensus 80 ~~d~i~~~D~D~~~~~~~l~~l~~~ 104 (181)
T cd04187 80 RGDAVITMDADLQDPPELIPEMLAK 104 (181)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 45889999999987543 4555553
No 84
>COG5020 KTR1 Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=29.34 E-value=1.6e+02 Score=28.09 Aligned_cols=112 Identities=17% Similarity=0.221 Sum_probs=64.2
Q ss_pred CCeEEEEEeeeCcccHHHHHHHHHHHHhc-CC--CCcEEEEECCCCCHHHHHHHHHcC---CEEEEecc--cCCCCch--
Q 037698 3 SKRAYVTFLAGNGDYVKGVVGLVKGLRKA-KS--AYPLAVAVLPDVPADHRKILVSQG---CIVREIQP--VYPPENQ-- 72 (314)
Q Consensus 3 ~~~A~vT~l~~d~~Yl~~~~vl~~SL~~~-~~--~~~ivvlv~~~ls~~~~~~L~~~~---~~v~~i~~--i~~~~~~-- 72 (314)
.+.++|| |+.|.+ +.+++.+|+|+-.+ |. .||-+.|-++..+++-++..++.- .+.-.|+. ...|+..
T Consensus 81 ~natfv~-L~RN~d-L~~vl~Si~svE~rFNk~f~YpwvFLNdepFteeFk~~~~~~~s~~~~fg~i~~e~W~~P~~Id~ 158 (399)
T COG5020 81 ENATFVM-LARNSD-LEDVLSSIRSVEDRFNKNFHYPWVFLNDEPFTEEFKEATSDITSGLTEFGLIPKDEWNFPEWIDE 158 (399)
T ss_pred cccEEEE-EEechh-HHHHHHHHHHHHHHhhccCCCCeEEecCchhHHHHHHHHHHHhccceEEEEECHHHcCCccccch
Confidence 4567777 567777 99999999999754 43 578775655568888777766542 23323332 1222211
Q ss_pred h-------hhhh---cc----cccccchh----hh--ccccccceEEEEecCeeeccCch-hhhc
Q 037698 73 T-------QFAM---AY----YVINYSKL----RI--WEFVEYAKMIYLDGDIQVFENID-HLFE 116 (314)
Q Consensus 73 ~-------~~~~---~~----~~~~y~KL----~i--~~l~~ydrvlYLD~D~lv~~did-eLf~ 116 (314)
. .+.. .+ +--.+.|+ +- |-|.+||-.==+++|+=...+|+ +.|.
T Consensus 159 ~~~~e~~~~~~~~~i~Yg~s~SYr~MCRf~SgfFyrHpll~~Yd~yWRvEP~vk~~Cdi~yDpF~ 223 (399)
T COG5020 159 DKAAESLDDMADEGILYGGSESYRHMCRFFSGFFYRHPLLDEYDYYWRVEPDVKLYCDIDYDPFR 223 (399)
T ss_pred HHHHHHHHHHhhcCccccCcHHHHHHHHHhhcceeecccchhcceEEEecCCceEEeccCCCHHH
Confidence 1 1111 00 00012233 22 22337998888899998888887 4554
No 85
>KOG4472 consensus Glycolipid 2-alpha-mannosyltransferase (alpha-1,2-mannosyltransferase) [Carbohydrate transport and metabolism]
Probab=29.34 E-value=1.6e+02 Score=28.09 Aligned_cols=112 Identities=17% Similarity=0.221 Sum_probs=64.2
Q ss_pred CCeEEEEEeeeCcccHHHHHHHHHHHHhc-CC--CCcEEEEECCCCCHHHHHHHHHcC---CEEEEecc--cCCCCch--
Q 037698 3 SKRAYVTFLAGNGDYVKGVVGLVKGLRKA-KS--AYPLAVAVLPDVPADHRKILVSQG---CIVREIQP--VYPPENQ-- 72 (314)
Q Consensus 3 ~~~A~vT~l~~d~~Yl~~~~vl~~SL~~~-~~--~~~ivvlv~~~ls~~~~~~L~~~~---~~v~~i~~--i~~~~~~-- 72 (314)
.+.++|| |+.|.+ +.+++.+|+|+-.+ |. .||-+.|-++..+++-++..++.- .+.-.|+. ...|+..
T Consensus 81 ~natfv~-L~RN~d-L~~vl~Si~svE~rFNk~f~YpwvFLNdepFteeFk~~~~~~~s~~~~fg~i~~e~W~~P~~Id~ 158 (399)
T KOG4472|consen 81 ENATFVM-LARNSD-LEDVLSSIRSVEDRFNKNFHYPWVFLNDEPFTEEFKEATSDITSGLTEFGLIPKDEWNFPEWIDE 158 (399)
T ss_pred cccEEEE-EEechh-HHHHHHHHHHHHHHhhccCCCCeEEecCchhHHHHHHHHHHHhccceEEEEECHHHcCCccccch
Confidence 4567777 567777 99999999999754 43 578775655568888777766542 23323332 1222211
Q ss_pred h-------hhhh---cc----cccccchh----hh--ccccccceEEEEecCeeeccCch-hhhc
Q 037698 73 T-------QFAM---AY----YVINYSKL----RI--WEFVEYAKMIYLDGDIQVFENID-HLFE 116 (314)
Q Consensus 73 ~-------~~~~---~~----~~~~y~KL----~i--~~l~~ydrvlYLD~D~lv~~did-eLf~ 116 (314)
. .+.. .+ +--.+.|+ +- |-|.+||-.==+++|+=...+|+ +.|.
T Consensus 159 ~~~~e~~~~~~~~~i~Yg~s~SYr~MCRf~SgfFyrHpll~~Yd~yWRvEP~vk~~Cdi~yDpF~ 223 (399)
T KOG4472|consen 159 DKAAESLDDMADEGILYGGSESYRHMCRFFSGFFYRHPLLDEYDYYWRVEPDVKLYCDIDYDPFR 223 (399)
T ss_pred HHHHHHHHHHhhcCccccCcHHHHHHHHHhhcceeecccchhcceEEEecCCceEEeccCCCHHH
Confidence 1 1111 00 00012233 22 22337998888899998888887 4554
No 86
>PRK10018 putative glycosyl transferase; Provisional
Probab=29.11 E-value=4.3e+02 Score=23.78 Aligned_cols=25 Identities=12% Similarity=0.130 Sum_probs=18.7
Q ss_pred ccccceEEEEecCeeeccC-chhhhc
Q 037698 92 FVEYAKMIYLDGDIQVFEN-IDHLFE 116 (314)
Q Consensus 92 l~~ydrvlYLD~D~lv~~d-ideLf~ 116 (314)
....+-|++||+|.++..+ |..+.+
T Consensus 83 ~a~g~~I~~lDaDD~~~p~~l~~~~~ 108 (279)
T PRK10018 83 LAQGEYITGIDDDDEWTPNRLSVFLA 108 (279)
T ss_pred HcCCCEEEEECCCCCCCccHHHHHHH
Confidence 4467889999999988876 454444
No 87
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=26.54 E-value=2.4e+02 Score=20.27 Aligned_cols=68 Identities=12% Similarity=0.014 Sum_probs=34.1
Q ss_pred CcEEEEECCCCCHHHHHHHHHcC-CEEEEecccCCCCchhhhhhcccccccchhhhccccccceEEEEecCeeeccC
Q 037698 35 YPLAVAVLPDVPADHRKILVSQG-CIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFEN 110 (314)
Q Consensus 35 ~~ivvlv~~~ls~~~~~~L~~~~-~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~ydrvlYLD~D~lv~~d 110 (314)
.+-++++.++-++...+.|++.. ..++... .+... ... ...+.+..+-...+.+=|+++|+|=++.-+
T Consensus 19 ~d~i~i~d~~s~D~t~~~l~~~~~v~i~~~~--~~~~~-~~~-----~~~~~~~~~~~~~~~dWvl~~D~DEfl~~~ 87 (97)
T PF13704_consen 19 VDHIYIYDDGSTDGTREILRALPGVGIIRWV--DPYRD-ERR-----QRAWRNALIERAFDADWVLFLDADEFLVPP 87 (97)
T ss_pred CCEEEEEECCCCccHHHHHHhCCCcEEEEeC--CCccc-hHH-----HHHHHHHHHHhCCCCCEEEEEeeeEEEecC
Confidence 34455677777777778887753 2222211 11110 000 011222222223467889999999776644
No 88
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=24.79 E-value=4.2e+02 Score=28.25 Aligned_cols=62 Identities=6% Similarity=-0.071 Sum_probs=35.3
Q ss_pred EEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhccccccceEEEEecCeeeccCc
Q 037698 38 AVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAKMIYLDGDIQVFENI 111 (314)
Q Consensus 38 vvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~ydrvlYLD~D~lv~~di 111 (314)
+++++|+-+++..+.+++.+++++..+ ++. +-+. .. .=...+..+.|-|+.+|+|.++..|.
T Consensus 295 ViVVDDgS~D~t~~la~~~~v~yI~R~-----~n~-~gKA-Gn-----LN~aL~~a~GEyIavlDAD~ip~pdf 356 (852)
T PRK11498 295 IWILDDGGREEFRQFAQEVGVKYIARP-----THE-HAKA-GN-----INNALKYAKGEFVAIFDCDHVPTRSF 356 (852)
T ss_pred EEEEeCCCChHHHHHHHHCCcEEEEeC-----CCC-cchH-HH-----HHHHHHhCCCCEEEEECCCCCCChHH
Confidence 446677777777777887776654221 111 0000 00 00011124679999999999987765
No 89
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=24.38 E-value=2.6e+02 Score=24.78 Aligned_cols=25 Identities=24% Similarity=0.437 Sum_probs=19.6
Q ss_pred cccceEEEEecCeeec-cCchhhhcCC
Q 037698 93 VEYAKMIYLDGDIQVF-ENIDHLFELP 118 (314)
Q Consensus 93 ~~ydrvlYLD~D~lv~-~dideLf~~~ 118 (314)
..++|||||+ |+++. .|+-+|....
T Consensus 111 ~~fd~VlfLN-DV~f~~~Dil~LL~~~ 136 (241)
T PF11735_consen 111 RRFDKVLFLN-DVFFCPEDILELLFTR 136 (241)
T ss_pred CCcCEEEEec-CcccCHHHHHHHHhhc
Confidence 4699999999 85554 7888888764
No 90
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=23.72 E-value=4.1e+02 Score=23.37 Aligned_cols=57 Identities=11% Similarity=0.169 Sum_probs=40.7
Q ss_pred EEEEeeeCc-----ccHHHHHHHHHHHHhc--CCCCcEEEEECCCCCHHHHHHHHHcCCEEEEe
Q 037698 7 YVTFLAGNG-----DYVKGVVGLVKGLRKA--KSAYPLAVAVLPDVPADHRKILVSQGCIVREI 63 (314)
Q Consensus 7 ~vT~l~~d~-----~Yl~~~~vl~~SL~~~--~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i 63 (314)
+|.+++.++ .|.+.+..=+..+++. ...+.+.+-++.|++.++...+.+.|+.+..+
T Consensus 133 ~VLvMsV~PGf~GQ~fi~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~~i~~~~~aGad~~V~ 196 (229)
T PRK09722 133 KITVMTVDPGFAGQPFIPEMLDKIAELKALRERNGLEYLIEVDGSCNQKTYEKLMEAGADVFIV 196 (229)
T ss_pred EEEEEEEcCCCcchhccHHHHHHHHHHHHHHHhcCCCeEEEEECCCCHHHHHHHHHcCCCEEEE
Confidence 455566554 6777777777777754 22445666788889999999999988876543
No 91
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=22.82 E-value=1.3e+02 Score=26.52 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=27.7
Q ss_pred HHHHHHHHh-cCCCCcEEEEECCCCCHHHHHHHHHc
Q 037698 22 VGLVKGLRK-AKSAYPLAVAVLPDVPADHRKILVSQ 56 (314)
Q Consensus 22 ~vl~~SL~~-~~~~~~ivvlv~~~ls~~~~~~L~~~ 56 (314)
.+++-||+. ++++..++|++++.+++..+++|.++
T Consensus 45 ~~~LpSl~~QTd~dF~~lv~~~~~~P~~~~~rL~~l 80 (234)
T PF11316_consen 45 TYCLPSLRAQTDQDFTWLVLFDDDLPEPYRERLRDL 80 (234)
T ss_pred HHHhhHHHhccCCCeEEEEEECCCCCHHHHHHHHHH
Confidence 457788875 46677777788889999999999885
No 92
>PLN02565 cysteine synthase
Probab=22.21 E-value=3.4e+02 Score=25.07 Aligned_cols=48 Identities=19% Similarity=0.326 Sum_probs=34.1
Q ss_pred eCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCCEEEEecc
Q 037698 13 GNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQP 65 (314)
Q Consensus 13 ~d~~Yl~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~ 65 (314)
+..|+-.++....+. -.++++|++.++.+++.++.++.+|.+++.+..
T Consensus 74 SsGN~g~alA~~a~~-----~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 74 TSGNTGIGLAFMAAA-----KGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred CCChHHHHHHHHHHH-----cCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 455665444333322 346788888889999999999999999987654
No 93
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=22.20 E-value=3.2e+02 Score=21.65 Aligned_cols=45 Identities=24% Similarity=0.168 Sum_probs=32.6
Q ss_pred eCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCC
Q 037698 13 GNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGC 58 (314)
Q Consensus 13 ~d~~Yl~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~~~ 58 (314)
.+..|...+..++..|++.+.. ++.+++...++++..+.|++.|.
T Consensus 62 l~~~~~~~~~~~~~~L~~~g~~-~i~vivGG~~~~~~~~~l~~~Gv 106 (132)
T TIGR00640 62 LAGGHLTLVPALRKELDKLGRP-DILVVVGGVIPPQDFDELKEMGV 106 (132)
T ss_pred chhhhHHHHHHHHHHHHhcCCC-CCEEEEeCCCChHhHHHHHHCCC
Confidence 3567888888888888877654 44455554577777888998885
No 94
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=21.83 E-value=3.3e+02 Score=20.93 Aligned_cols=45 Identities=16% Similarity=0.168 Sum_probs=30.0
Q ss_pred eCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCC
Q 037698 13 GNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGC 58 (314)
Q Consensus 13 ~d~~Yl~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~~~ 58 (314)
.+..+...+..++..|++.+.. .+.+++....+++..+.|++.|.
T Consensus 59 ~~~~~~~~~~~~~~~L~~~~~~-~i~i~~GG~~~~~~~~~~~~~G~ 103 (122)
T cd02071 59 LSGGHMTLFPEVIELLRELGAG-DILVVGGGIIPPEDYELLKEMGV 103 (122)
T ss_pred cchhhHHHHHHHHHHHHhcCCC-CCEEEEECCCCHHHHHHHHHCCC
Confidence 4667888888888888877554 33334444456666778888774
No 95
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=21.81 E-value=94 Score=26.03 Aligned_cols=24 Identities=17% Similarity=0.263 Sum_probs=17.3
Q ss_pred cccceEEEEecCeeeccC-chhhhc
Q 037698 93 VEYAKMIYLDGDIQVFEN-IDHLFE 116 (314)
Q Consensus 93 ~~ydrvlYLD~D~lv~~d-ideLf~ 116 (314)
...|-|+++|+|...-.+ +..+.+
T Consensus 81 a~gd~i~~ld~D~~~~~~~l~~l~~ 105 (211)
T cd04188 81 ARGDYILFADADLATPFEELEKLEE 105 (211)
T ss_pred hcCCEEEEEeCCCCCCHHHHHHHHH
Confidence 345889999999876654 555555
No 96
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=21.28 E-value=2.2e+02 Score=26.20 Aligned_cols=32 Identities=22% Similarity=0.315 Sum_probs=27.9
Q ss_pred CCcEEEEECCCCCHHHHHHHHHcCCEEEEecc
Q 037698 34 AYPLAVAVLPDVPADHRKILVSQGCIVREIQP 65 (314)
Q Consensus 34 ~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~ 65 (314)
.|++++++.+..|.+.++.|+.+|.+++.++.
T Consensus 85 Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 85 GYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 58888888888999999999999999987665
No 97
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=20.20 E-value=5e+02 Score=22.81 Aligned_cols=55 Identities=5% Similarity=-0.042 Sum_probs=37.4
Q ss_pred EEEEeeeCc-----ccHHHHHHHHHHHHhc--CCCCcEEEEECCCCCHHHHHHHHHcCCEEE
Q 037698 7 YVTFLAGNG-----DYVKGVVGLVKGLRKA--KSAYPLAVAVLPDVPADHRKILVSQGCIVR 61 (314)
Q Consensus 7 ~vT~l~~d~-----~Yl~~~~vl~~SL~~~--~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~ 61 (314)
+|++++.++ .|.+.+.-=+..+++. ...+.+.+-++.|++.++...+.+.|..+.
T Consensus 143 ~VLiMtV~PGfgGQ~f~~~~l~KI~~lr~~~~~~~~~~~IeVDGGI~~~ti~~l~~aGaD~~ 204 (228)
T PRK08091 143 LIQILTLDPRTGTKAPSDLILDRVIQVENRLGNRRVEKLISIDGSMTLELASYLKQHQIDWV 204 (228)
T ss_pred EEEEEEECCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHCCCCEE
Confidence 456666655 5666666666666643 223455566788899999999999887654
No 98
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=20.18 E-value=3.6e+02 Score=26.17 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=26.8
Q ss_pred CCcEEEEECCCCCHHHHHHHHHcCCEEEEec
Q 037698 34 AYPLAVAVLPDVPADHRKILVSQGCIVREIQ 64 (314)
Q Consensus 34 ~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~ 64 (314)
.++.+|++..+.+.+.++.++..|.+++.+.
T Consensus 175 G~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~ 205 (431)
T TIGR02035 175 GFQVTVHMSADAKQWKKDKLRSKGVTVVEYE 205 (431)
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCCEEEEEC
Confidence 3678888888999999999999999998665
Done!