Query 037698
Match_columns 314
No_of_seqs 233 out of 1389
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 05:20:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037698.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037698hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u2u_A Glycogenin-1, GN-1, GN1 100.0 7.9E-49 2.7E-53 350.3 18.6 243 2-280 2-261 (263)
2 1ll2_A Glycogenin-1; protein-s 100.0 2E-45 7E-50 339.9 18.5 249 2-286 1-266 (333)
3 3tzt_A Glycosyl transferase fa 100.0 7.1E-40 2.4E-44 295.8 14.1 237 11-276 10-271 (276)
4 1g9r_A Glycosyl transferase; a 100.0 4.7E-36 1.6E-40 275.4 13.9 221 11-252 5-256 (311)
5 1qg8_A Protein (spore coat pol 74.0 4.2 0.00014 34.1 5.2 87 19-115 14-110 (255)
6 1o7q_A N-acetyllactosaminide a 65.9 18 0.0006 31.7 7.3 118 94-222 138-264 (289)
7 3bcv_A Putative glycosyltransf 60.9 2.8 9.7E-05 34.7 1.3 78 20-110 19-100 (240)
8 2d7i_A Polypeptide N-acetylgal 60.6 5 0.00017 38.8 3.2 92 13-116 121-219 (570)
9 1fo8_A Alpha-1,3-mannosyl-glyc 59.6 32 0.0011 30.9 8.2 102 11-116 9-121 (343)
10 3f1y_A Mannosyl-3-phosphoglyce 55.7 53 0.0018 29.9 9.1 82 16-106 107-191 (387)
11 3ckj_A Putative uncharacterize 55.7 18 0.0006 32.0 5.8 89 19-116 61-155 (329)
12 2p6w_A VP54, putative glycosyl 55.4 26 0.0009 28.8 6.1 73 164-242 118-198 (213)
13 1xhb_A Polypeptide N-acetylgal 54.9 7.8 0.00027 36.1 3.4 87 19-116 43-137 (472)
14 2z86_A Chondroitin synthase; G 50.8 42 0.0014 32.3 8.0 83 18-110 105-190 (625)
15 3ioh_A Histo-blood group ABO s 49.3 75 0.0026 27.9 8.4 59 163-221 206-272 (298)
16 1s4n_A Glycolipid 2-alpha-mann 40.7 88 0.003 28.1 7.7 113 3-117 27-169 (348)
17 2ffu_A Ppgalnact-2, polypeptid 39.7 35 0.0012 32.0 5.3 86 20-116 81-169 (501)
18 4ayl_A BOGT-metal-independent 37.8 59 0.002 27.7 5.8 118 94-220 87-216 (246)
19 1loi_A Cyclic 3',5'-AMP specif 23.1 29 0.00099 17.9 0.8 7 244-250 11-17 (26)
20 2z86_A Chondroitin synthase; G 21.3 1.1E+02 0.0039 29.2 5.4 79 19-110 388-470 (625)
No 1
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=100.00 E-value=7.9e-49 Score=350.32 Aligned_cols=243 Identities=28% Similarity=0.470 Sum_probs=199.0
Q ss_pred CCCeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCCc--hhhhhhcc
Q 037698 2 SSKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPEN--QTQFAMAY 79 (314)
Q Consensus 2 ~~~~A~vT~l~~d~~Yl~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~--~~~~~~~~ 79 (314)
|+++||||+ ++|++|+++++|+++||+++++++++++|++++++++.++.|++.+.+++.|+.+..+.. ...+..++
T Consensus 2 ~~~~AyvTl-~td~~Yl~ga~vL~~SL~~~~s~~~lvvLvt~~vs~~~~~~L~~~~~~vi~V~~l~~~~~~~~~~~~rp~ 80 (263)
T 3u2u_A 2 MTDQAFVTL-TTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPE 80 (263)
T ss_dssp TTTEEEEEE-ESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHSSEEEECCCCCCCCHHHHHHTTCTT
T ss_pred CcceEEEEE-EECHHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHHHHHHcCCeEEEeeecCCcchhhhhhhcCcc
Confidence 468999995 579999999999999999999999999999999999999999999999999988765421 12223344
Q ss_pred cccccchhhhccccccceEEEEecCeeeccCchhhhcCCCCceecccchhcccCCCCCCcccccccccCCCCCCCCCCCC
Q 037698 80 YVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMG 159 (314)
Q Consensus 80 ~~~~y~KL~i~~l~~ydrvlYLD~D~lv~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g 159 (314)
+..+|+||++|++++||||||||+|++|++||++||+++ .+||++|. +||
T Consensus 81 ~~~~~~kl~~~~l~~~~~vlylD~D~~v~~~~~~Lf~~~--~~aA~~d~------------------------~~~---- 130 (263)
T 3u2u_A 81 LGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDRE--ELSAAPDP------------------------GWP---- 130 (263)
T ss_dssp GGGGGGGGGGGGCTTCSEEEEECTTEEECSCCGGGGGSC--SSEEEECT------------------------TST----
T ss_pred hhHHhHHHHhccccCcceEEEEcCCEeeccCHHHHhCCC--cceEeccC------------------------CCC----
Confidence 678999999999999999999999999999999999997 48888752 332
Q ss_pred CCCCCcccceEEEEecCHHHHHHHHHHHhcCCCCCCCchhHHHHHHcc-----CceecCCcccccccccccCCCCCC--C
Q 037698 160 SPPPKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRN-----IYKPISHTYNFVLAMLWRHPEHVE--T 232 (314)
Q Consensus 160 ~~~~~yfNsGvmli~~~~~~~~~ll~~~~~~~~~~~~DQdiLN~~f~~-----~~~~Lp~~yN~~~~~~~~~~~~~~--~ 232 (314)
.|||||||||+|+..+++++++.+.+..++.++|||+||.+|.+ .++.||.+||++....|.+...+. .
T Consensus 131 ----~~fNsGv~li~p~~~~~~~l~~~~~~~~~~~~~DQd~LN~~f~~w~~~~~~~~Lp~~yN~~~~~~y~~~~~~~~~~ 206 (263)
T 3u2u_A 131 ----DCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFKVFG 206 (263)
T ss_dssp ----TSEEEEEEEECCCHHHHHHHHHHHHHHCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEEHHHHHSSHHHHHHHG
T ss_pred ----ccccCeEEEEcccHHHHHHHHHHHHhcCCCCcccHHHHHHHhccccccCeeEeCCcccccccchhccccHHHHhhc
Confidence 69999999999999999999999876666788999999999987 789999999999865554432222 5
Q ss_pred CCeEEEEeeCCCCCCCCcCCCCCC--------CChhhhHHHHHHHHHHHhhccccc
Q 037698 233 EKVKVVHYCASGSKPWRYTGKEEN--------MDREDIKMLVKKWKDIYEDKSLDY 280 (314)
Q Consensus 233 ~~~~IiHf~g~~~KPW~~~~~~~~--------~~~~~~~~~~~~Ww~~~~~~~~~~ 280 (314)
++++||||+| ..|||+....... .....+..+.++||..|.+..+..
T Consensus 207 ~~~~IIHf~g-~~KPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~ww~~~~~~~~~~ 261 (263)
T 3u2u_A 207 ASAKVVHFLG-RVKPWNYTYDPKTKSVKSEAHDPNMTHPEFLILWWNIFTTNVLPL 261 (263)
T ss_dssp GGCSEEECCS-SSCGGGSEEETTTTEEECCSSCGGGSSTHHHHHHHHHHHHHTGGG
T ss_pred CCeEEEEECC-CCcCCCCCCCCCCCcccccCCCcchhHHHHHHHHHHHHHhhcCcC
Confidence 7899999999 8999987532111 011113688999999999866543
No 2
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=100.00 E-value=2e-45 Score=339.93 Aligned_cols=249 Identities=29% Similarity=0.458 Sum_probs=197.4
Q ss_pred CCCeEEEEEeeeCcccHHHHHHHHHHHHhcCCCCcEEEEECCCCCHHHHHHHHHcCCEEEEecccCCCC--chhhhhhcc
Q 037698 2 SSKRAYVTFLAGNGDYVKGVVGLVKGLRKAKSAYPLAVAVLPDVPADHRKILVSQGCIVREIQPVYPPE--NQTQFAMAY 79 (314)
Q Consensus 2 ~~~~A~vT~l~~d~~Yl~~~~vl~~SL~~~~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~--~~~~~~~~~ 79 (314)
|+|.||||+ ++|++|++++.|+++||+++++++++++|++++++++.++.|++.+..++.|+.+..+. ....+..++
T Consensus 1 Ms~~a~vt~-~~d~~Yl~~a~vl~~SL~~~~s~~~l~vlv~~~is~~~~~~L~~~~~~v~~v~~l~~~~~~~~~~~~~~~ 79 (333)
T 1ll2_A 1 MTDQAFVTL-TTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPE 79 (333)
T ss_dssp CCSEEEEEE-ESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGG
T ss_pred CCceEEEEE-EeCHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHhCCEEEEEeecCCcchhhcccccccc
Confidence 568999994 67999999999999999999999999989999999999999999999988888765432 111122334
Q ss_pred cccccchhhhccccccceEEEEecCeeeccCchhhhcCCCCceecccchhcccCCCCCCcccccccccCCCCCCCCCCCC
Q 037698 80 YVINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMG 159 (314)
Q Consensus 80 ~~~~y~KL~i~~l~~ydrvlYLD~D~lv~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g 159 (314)
+..+|+||++|++.+|+||||||+|+||++||++||+++ .+|||+| .+||
T Consensus 80 ~~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~di~eLf~~~--~~aAv~d------------------------~~~~---- 129 (333)
T 1ll2_A 80 LGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFERE--ELSAAPD------------------------PGWP---- 129 (333)
T ss_dssp GHHHHHHGGGGGCTTCSEEEEECTTEEECSCCGGGGGSC--SSEEEEC------------------------SSST----
T ss_pred hHHHHHHHHHhHhcCCCeEEEEeCCEEeccCHHHHhCCC--ceeEEec------------------------CCCC----
Confidence 567899999999999999999999999999999999997 4888865 2333
Q ss_pred CCCCCcccceEEEEecCHHHHHHHHHHHhcCCCCCCCchhHHHHHHccCc-----eecCCcccccccccccCCCCC--CC
Q 037698 160 SPPPKYFNAGMFVYEPNLLTYSHLLETLKVTPPSSFAEQDFLNNFFRNIY-----KPISHTYNFVLAMLWRHPEHV--ET 232 (314)
Q Consensus 160 ~~~~~yfNsGvmli~~~~~~~~~ll~~~~~~~~~~~~DQdiLN~~f~~~~-----~~Lp~~yN~~~~~~~~~~~~~--~~ 232 (314)
.|||||||||+|+..+++++++.+.++..+.++||++||.+|.+.. ..||.+||++....|.+...+ ..
T Consensus 130 ----~~fNsGvmlin~~~~~~~~l~~~~~~~~~~~~~DQ~~LN~~f~~~~~~~~~~~Lp~~yN~~~~~~~~~~p~~~~~~ 205 (333)
T 1ll2_A 130 ----DCFNSGVFVYQPSVETYNQLLHVASEQGSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFG 205 (333)
T ss_dssp ----TSEEEEEEEECCCHHHHHHHHHHHHHTCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEETTHHHHTHHHHHHHG
T ss_pred ----cceeeeEEEEeCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHhhcccCccccCCcHHhcccccchhccHHHHhhc
Confidence 6999999999999999999999988766778899999999998633 799999999986544321111 15
Q ss_pred CCeEEEEeeCCCCCCCCcCCCC--CCC--Chhh----hHHHHHHHHHHHhhccccccchhhh
Q 037698 233 EKVKVVHYCASGSKPWRYTGKE--ENM--DRED----IKMLVKKWKDIYEDKSLDYKNLAMD 286 (314)
Q Consensus 233 ~~~~IiHf~g~~~KPW~~~~~~--~~~--~~~~----~~~~~~~Ww~~~~~~~~~~~~~~~~ 286 (314)
.+++||||+| ..|||+..... ... .+++ +..+++.||++|++...+....-+.
T Consensus 206 ~~~~IiHf~g-~~KPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~WW~~~~~~~~~~~~~~~~ 266 (333)
T 1ll2_A 206 ANAKVVHFLG-QTKPWNYTYDTKTKSVRSEGHDPTMTHPQFLNVWWDIFTTSVVPLLQQFGL 266 (333)
T ss_dssp GGCSEEECCS-SCCGGGSCEETTTTEEC--------CCHHHHHHHHHHHHHTHHHHHTC---
T ss_pred CCCEEEEECC-CCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHhhcccccchhhc
Confidence 7899999999 89999876311 100 1111 3478999999999988887655543
No 3
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=100.00 E-value=7.1e-40 Score=295.77 Aligned_cols=237 Identities=18% Similarity=0.299 Sum_probs=160.9
Q ss_pred eeeCcccHHHHHHHHHHHHhcCCCCcE-EEEECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhhhh--hcccccc
Q 037698 11 LAGNGDYVKGVVGLVKGLRKAKSAYPL-AVAVLPDVPADHRKILVSQ----GCIVREIQPVYPPENQTQFA--MAYYVIN 83 (314)
Q Consensus 11 l~~d~~Yl~~~~vl~~SL~~~~~~~~i-vvlv~~~ls~~~~~~L~~~----~~~v~~i~~i~~~~~~~~~~--~~~~~~~ 83 (314)
+++|++|+.++.|+++||++|+++.++ ++++++++++++++.|++. ++++..+..-. +....+. ..++..+
T Consensus 10 ~~~d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~s~~~ 87 (276)
T 3tzt_A 10 LTLDENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATD--DLFSFAKVTDRYPKEM 87 (276)
T ss_dssp EECCGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC---------------CHHH
T ss_pred EEeCHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCH--HHHhcCccccccCHHH
Confidence 678999999999999999999886555 3366789999998877763 55555444311 1111111 1234578
Q ss_pred cchhhhcccc--ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCCCCCCcccccccccCCCCCCCCCCCC
Q 037698 84 YSKLRIWEFV--EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASMG 159 (314)
Q Consensus 84 y~KL~i~~l~--~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~g 159 (314)
|+||++|+++ +++||||||+|++|++||++||+++ +..+|||+|+.+.. +... + ...+ ++
T Consensus 88 ~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~-~~~~--~---------~~~~----l~ 151 (276)
T 3tzt_A 88 YYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTD-MANN--V---------NRIR----LG 151 (276)
T ss_dssp HHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC--------------------------------
T ss_pred HHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccch-HHHH--H---------HHhc----CC
Confidence 9999999986 5999999999999999999999984 45799999875321 1000 0 0111 22
Q ss_pred CCCCCcccceEEEEecCHHH----HHHHHHHHhcCC-CCCCCchhHHHHHHccCceecCC-cccccccccc----cCCCC
Q 037698 160 SPPPKYFNAGMFVYEPNLLT----YSHLLETLKVTP-PSSFAEQDFLNNFFRNIYKPISH-TYNFVLAMLW----RHPEH 229 (314)
Q Consensus 160 ~~~~~yfNsGvmli~~~~~~----~~~ll~~~~~~~-~~~~~DQdiLN~~f~~~~~~Lp~-~yN~~~~~~~----~~~~~ 229 (314)
. +..||||||||+|+++.. .+++++.++++. .+.++|||+||.+|.++|..||. +||++.+... .....
T Consensus 152 ~-~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~~~~~~~~~ 230 (276)
T 3tzt_A 152 T-DTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNHMNLLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSSYLIRSKKQ 230 (276)
T ss_dssp -----CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC--------CHHHHHHHGGGEEEEEHHHHSEETTCHHHHHHHTTTC
T ss_pred C-CCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhccccccCCChhHHHHHHhCCEEECCchheeeecccchhhhccccch
Confidence 1 248999999999999843 566777776553 56789999999999999999999 9999975321 11111
Q ss_pred C----CCCCeEEEEeeCCCCCCCCcCCCCCCCChhhhHHHHHHHHHHHhhc
Q 037698 230 V----ETEKVKVVHYCASGSKPWRYTGKEENMDREDIKMLVKKWKDIYEDK 276 (314)
Q Consensus 230 ~----~~~~~~IiHf~g~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~ 276 (314)
+ ..++++||||+| ..|||+..+ ...+.++||+|++..
T Consensus 231 ~~~~~~~~~~~iiHy~g-~~KPW~~~~---------~~~~~~~w~~Y~~~~ 271 (276)
T 3tzt_A 231 ADLAWLMDHTVVLHFCG-RDKPWKKNH---------RNKFTSLYKHYMSLT 271 (276)
T ss_dssp CSHHHHHHHCCEEECCS-SCCTTSTTC---------CSTTHHHHHHHHHHH
T ss_pred hhhhhhccCCeEEEECC-CCCCcCCCC---------CCchHHHHHHHHHHH
Confidence 1 146799999999 899999865 256899999998754
No 4
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=100.00 E-value=4.7e-36 Score=275.39 Aligned_cols=221 Identities=22% Similarity=0.413 Sum_probs=157.7
Q ss_pred eeeCcccHHHHHHHHHHH-HhcCC-CCcEEEEECCCCCHHHHHHHHHc----CCEEEEecccCCCCchhhhh---hcccc
Q 037698 11 LAGNGDYVKGVVGLVKGL-RKAKS-AYPLAVAVLPDVPADHRKILVSQ----GCIVREIQPVYPPENQTQFA---MAYYV 81 (314)
Q Consensus 11 l~~d~~Yl~~~~vl~~SL-~~~~~-~~~ivvlv~~~ls~~~~~~L~~~----~~~v~~i~~i~~~~~~~~~~---~~~~~ 81 (314)
+++|++|+.++.|+++|| +++++ ...++ +++++++++.++.|++. +.++..+.+ +.. ....+. ...+.
T Consensus 5 ~~~d~~Y~~~~~vli~Sl~l~~~~~~~~f~-il~~~ls~~~~~~L~~~~~~~~~~i~~~~~-~~~-~~~~~~~~~~~~s~ 81 (311)
T 1g9r_A 5 FAADDNYAAYLCVAAKSVEAAHPDTEIRFH-VLDAGISEANRAAVAANLRGGGGNIRFIDV-NPE-DFAGFPLNIRHISI 81 (311)
T ss_dssp EEECGGGHHHHHHHHHHHHHTCTTSCCEEE-EEESSCCHHHHHHHHHHSGGGTTTEEEEEC-CGG-GGTTSCCCCTTCCG
T ss_pred EECCHhHHHHHHHHHHHHHHHcCCCCceEE-EEECCCCHHHHHHHHHHHHHcCCEEEEEEc-CHH-HHhcCccccccCCH
Confidence 568999999999999999 66543 34445 45788999999888875 554443322 111 111111 11245
Q ss_pred cccchhhhcccc-ccceEEEEecCeeeccCchhhhcCC--CCceecccchhcccCCCCCCcccccccccCCCCCCCCCCC
Q 037698 82 INYSKLRIWEFV-EYAKMIYLDGDIQVFENIDHLFELP--NGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEKVKWPASM 158 (314)
Q Consensus 82 ~~y~KL~i~~l~-~ydrvlYLD~D~lv~~dideLf~~~--~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~ 158 (314)
.+|+||++|+++ +++||||||+|+||++||++||+++ +..+|||+|+.+... +.+. ...+++
T Consensus 82 ~~y~Rl~l~~ll~~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~----~~~~--------~~~~~~--- 146 (311)
T 1g9r_A 82 TTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQ----EGYK--------QKIGMA--- 146 (311)
T ss_dssp GGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTS----TTHH--------HHTTCC---
T ss_pred HHHHHHHHHHHhhhcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhh----HHHH--------HhcCCC---
Confidence 789999999964 7999999999999999999999984 567999998765310 0000 012211
Q ss_pred CCCCCCcccceEEEEecCH----HHHHHHHHHHhcC-CCCCCCchhHHHHHHccCceecCCccccccccc-----ccCCC
Q 037698 159 GSPPPKYFNAGMFVYEPNL----LTYSHLLETLKVT-PPSSFAEQDFLNNFFRNIYKPISHTYNFVLAML-----WRHPE 228 (314)
Q Consensus 159 g~~~~~yfNsGvmli~~~~----~~~~~ll~~~~~~-~~~~~~DQdiLN~~f~~~~~~Lp~~yN~~~~~~-----~~~~~ 228 (314)
....||||||||+|+++ .+++++++.+.+. ....++|||+||.+|.++|..||.+||++.... |..+.
T Consensus 147 --~~~~yfNsGv~linl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~lN~~f~~~~~~Lp~~wN~~~~~~~~~~~~~~~~ 224 (311)
T 1g9r_A 147 --DGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFASR 224 (311)
T ss_dssp --TTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTTTCSSHHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC----CS
T ss_pred --CCCceEeeeeeeeeHHHHHhcchHHHHHHHHHhccCcCccCCcCHHHHHHcCCEEEcChhhccCcchhhHHhhhcccc
Confidence 13479999999999997 3567888887654 346789999999999999999999999997542 11111
Q ss_pred ---CC------CCCCeEEEEeeCCCCCCCCcCC
Q 037698 229 ---HV------ETEKVKVVHYCASGSKPWRYTG 252 (314)
Q Consensus 229 ---~~------~~~~~~IiHf~g~~~KPW~~~~ 252 (314)
.+ ...+++||||+| ..|||...+
T Consensus 225 ~~~~~~~~~~~~~~~~~iiHy~g-~~KPW~~~~ 256 (311)
T 1g9r_A 225 HTDPLYRDRTNTVMPVAVSHYCG-PAKPWHRDC 256 (311)
T ss_dssp CCCHHHHHHHSCCSSCSEEECCS-SCCTTSSSC
T ss_pred cchhhhhHHhhccCCCEEEEeCC-cCCCCCCCC
Confidence 00 135889999999 899998764
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=73.96 E-value=4.2 Score=34.05 Aligned_cols=87 Identities=11% Similarity=0.053 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHc--CCEEEEecccCCC------Cchhhhhhcccccccchhhh
Q 037698 19 KGVVGLVKGLRKAK-SAYPLAVAVLPDVPADHRKILVSQ--GCIVREIQPVYPP------ENQTQFAMAYYVINYSKLRI 89 (314)
Q Consensus 19 ~~~~vl~~SL~~~~-~~~~ivvlv~~~ls~~~~~~L~~~--~~~v~~i~~i~~~------~~~~~~~~~~~~~~y~KL~i 89 (314)
..+.-++.||.... ++.. +++++++-+++..+.+++. ...+.-+.. ... .+. . ...++-..
T Consensus 14 ~~l~~~l~Sl~~q~~~~~e-iivvDd~S~d~t~~~~~~~~~~~~i~~i~~-~~~~~~~~~~n~-G-------~~~a~N~g 83 (255)
T 1qg8_A 14 DYVAKSISSILSQTFSDFE-LFIMDDNSNEETLNVIRPFLNDNRVRFYQS-DISGVKERTEKT-R-------YAALINQA 83 (255)
T ss_dssp TTHHHHHHHHHTCSCCCEE-EEEEECSCCHHHHHHHGGGGGSTTEEEEEC-CCCSHHHHHSSC-H-------HHHHHHHH
T ss_pred HHHHHHHHHHHhccCCceE-EEEEECCCCchHHHHHHHHhhcCCEEEEec-cccccccccccc-C-------HHHHHHHH
Confidence 44556777887543 3333 4466777777777777765 222222211 100 111 0 11223233
Q ss_pred ccccccceEEEEecCeeeccC-chhhh
Q 037698 90 WEFVEYAKMIYLDGDIQVFEN-IDHLF 115 (314)
Q Consensus 90 ~~l~~ydrvlYLD~D~lv~~d-ideLf 115 (314)
.+....+-|++||+|.++..+ |..+.
T Consensus 84 i~~a~g~~i~~lD~Dd~~~~~~l~~~~ 110 (255)
T 1qg8_A 84 IEMAEGEYITYATDDNIYMPDRLLKMV 110 (255)
T ss_dssp HHHCCCSEEEEEETTEEECTTHHHHHH
T ss_pred HHHcCCCEEEEeCCCCccChHHHHHHH
Confidence 334577899999999998764 33343
No 6
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=65.90 E-value=18 Score=31.73 Aligned_cols=118 Identities=15% Similarity=0.172 Sum_probs=60.7
Q ss_pred ccceEEEEecCeeeccCchhhhcCCCCceecccchhcccCCCCCCcccccccccCCCC-CCCCCCCCCCCCCcccceEEE
Q 037698 94 EYAKMIYLDGDIQVFENIDHLFELPNGYLYAAMDCFCEKTWSNSPQYKIGYCQQCPEK-VKWPASMGSPPPKYFNAGMFV 172 (314)
Q Consensus 94 ~ydrvlYLD~D~lv~~dideLf~~~~~~iaAv~d~~~~~~~~~~~~~~~~~~~~~p~~-~~~p~~~g~~~~~yfNsGvml 172 (314)
+.|-+.++|+|+++.+++..= .+ +..+|...-.+-..... .|.-+ ..|.. ...|... ..-|+-+|+.=
T Consensus 138 evDYLf~~dvd~~F~~~vG~E-~L-g~lv~~lHp~~y~~~~~---~fpYE---Rrp~S~AyIp~~e---GdfYY~Ga~fG 206 (289)
T 1o7q_A 138 EVDFLFCMDVDQVFQDKFGVE-TL-GESVAQLQAWWYKADPN---DFTYE---RRKESAAYIPFGE---GDFYYHAAIFG 206 (289)
T ss_dssp HCSEEEEECSSEEECSCBCGG-GC-SSEEEEECTTTTTSCGG---GSCCC---CCTTSTTCCCTTC---CSCCEEEEEEE
T ss_pred cCCEEEEeeCCcEeeccCCHH-HH-HHHHHccCHHHhCCCCC---CCCCC---CCcCceeeecCCC---CCEEEEceeeC
Confidence 799999999999999987531 11 11222221100000000 00001 01111 1112112 24677777775
Q ss_pred EecCH--HHHHHH----HHHHhcCCCCCCCchhHHHHHHc--cCceecCCcccccccc
Q 037698 173 YEPNL--LTYSHL----LETLKVTPPSSFAEQDFLNNFFR--NIYKPISHTYNFVLAM 222 (314)
Q Consensus 173 i~~~~--~~~~~l----l~~~~~~~~~~~~DQdiLN~~f~--~~~~~Lp~~yN~~~~~ 222 (314)
=.+.. .+.+.+ ++-..++-...+.|..-||.+|- ...+.||+.|+.....
T Consensus 207 Gt~~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNKYf~~~KPtKvLSPEY~wd~~~ 264 (289)
T 1o7q_A 207 GTPTQVLNITQECFKGILKDKKNDIEAQWHDESHLNKYFLLNKPTKILSPEYCWDYHI 264 (289)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSCCSEEECGGGSBCGGG
T ss_pred CcHHHHHHHHHHHHHHHHHHHhCCeEEEecchhhhhHHHhhcCCCEEECHHHCCCccc
Confidence 45544 222333 22223322346899999999964 3467899999987653
No 7
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=60.87 E-value=2.8 Score=34.75 Aligned_cols=78 Identities=14% Similarity=0.043 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhcC-CCCcEEEEECCCCCHHHHHHHHHc---CCEEEEecccCCCCchhhhhhcccccccchhhhcccccc
Q 037698 20 GVVGLVKGLRKAK-SAYPLAVAVLPDVPADHRKILVSQ---GCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEY 95 (314)
Q Consensus 20 ~~~vl~~SL~~~~-~~~~ivvlv~~~ls~~~~~~L~~~---~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~y 95 (314)
.+.-++.||.... ++.. +++++++-++...+.+++. ...+.-+. .+ +. .+. .+|=...+....
T Consensus 19 ~l~~~l~Sl~~q~~~~~e-iIvvDd~S~d~t~~~~~~~~~~~~~i~~i~---~~-n~-G~~-------~a~N~g~~~a~g 85 (240)
T 3bcv_A 19 YLDQCVQALLAQTLSDIE-IILIDDESPDNCPKICDDYAAQYPNIKVIH---KK-NA-GLG-------MACNSGLDVATG 85 (240)
T ss_dssp THHHHHHHHHTCSSSSEE-EEEEECCCSSSHHHHHHHHHHHCSSEEEEE---CC-CC-CHH-------HHHHHHHHHCCS
T ss_pred HHHHHHHHHHhCcCCCeE-EEEEECCCCcCHHHHHHHHHhhCCCEEEEE---CC-CC-ChH-------HHHHHHHHHcCC
Confidence 4456777887543 3333 4466666565555555543 22333222 11 11 111 112222333456
Q ss_pred ceEEEEecCeeeccC
Q 037698 96 AKMIYLDGDIQVFEN 110 (314)
Q Consensus 96 drvlYLD~D~lv~~d 110 (314)
+-|++||+|.++..+
T Consensus 86 ~~i~~lD~Dd~~~~~ 100 (240)
T 3bcv_A 86 EYVAFCDSDDYVDSD 100 (240)
T ss_dssp SEEEECCTTCCCCTT
T ss_pred CEEEEECCCCcCCHH
Confidence 899999999988655
No 8
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=60.62 E-value=5 Score=38.77 Aligned_cols=92 Identities=14% Similarity=0.070 Sum_probs=48.4
Q ss_pred eCcccHHHHHHHHHHHHhcCCC-Cc-EEEEECCCCCHHH-HHHHHHc---CCEEEEecccCCCCchhhhhhcccccccch
Q 037698 13 GNGDYVKGVVGLVKGLRKAKSA-YP-LAVAVLPDVPADH-RKILVSQ---GCIVREIQPVYPPENQTQFAMAYYVINYSK 86 (314)
Q Consensus 13 ~d~~Yl~~~~vl~~SL~~~~~~-~~-ivvlv~~~ls~~~-~~~L~~~---~~~v~~i~~i~~~~~~~~~~~~~~~~~y~K 86 (314)
-|.. +..+.-++.||...... .. -+|+|+++-++.. .+.|++. ...+.- +..+++. .+ .-++
T Consensus 121 yNe~-~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~v---i~~~~n~-G~-------~~A~ 188 (570)
T 2d7i_A 121 HNEG-WSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRI---LRTKKRE-GL-------IRTR 188 (570)
T ss_dssp SSCC-HHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEE---EECSSCC-CH-------HHHH
T ss_pred CCCC-HHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEE---EECCCCC-CH-------HHHH
Confidence 3443 56777888999876542 21 2446666655544 4555442 222222 2222111 11 1223
Q ss_pred hhhccccccceEEEEecCeeeccC-chhhhc
Q 037698 87 LRIWEFVEYAKMIYLDGDIQVFEN-IDHLFE 116 (314)
Q Consensus 87 L~i~~l~~ydrvlYLD~D~lv~~d-ideLf~ 116 (314)
-...+...-|-|++||+|+++..+ |..|.+
T Consensus 189 N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~ 219 (570)
T 2d7i_A 189 MLGASVATGDVITFLDSHCEANVNWLPPLLD 219 (570)
T ss_dssp HHHHHHCCSSEEEECCSSEEECTTCSHHHHH
T ss_pred HHHHHhcCCCEEEEEcCCccccccHHHHHHH
Confidence 333334457899999999999654 444544
No 9
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=59.62 E-value=32 Score=30.94 Aligned_cols=102 Identities=15% Similarity=0.231 Sum_probs=54.3
Q ss_pred eeeCcccHHHHHHHHHHHHhcCCCC--cEEEEECCCCCHHHHHHHHHcCCEEEEecccC------CCCchhhhhhcc-c-
Q 037698 11 LAGNGDYVKGVVGLVKGLRKAKSAY--PLAVAVLPDVPADHRKILVSQGCIVREIQPVY------PPENQTQFAMAY-Y- 80 (314)
Q Consensus 11 l~~d~~Yl~~~~vl~~SL~~~~~~~--~ivvlv~~~ls~~~~~~L~~~~~~v~~i~~i~------~~~~~~~~~~~~-~- 80 (314)
++.|.. . +.-++.||++..+.. ..+++..++-.++.++.+++.+..+..+..-+ .+++. .+...+ .
T Consensus 9 ~~yNRp--~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~~~~~~N~-g~~~y~~ia 84 (343)
T 1fo8_A 9 IACDRS--T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHR-KFQGYYKIA 84 (343)
T ss_dssp EESSCT--T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCG-GGHHHHHHH
T ss_pred EECCcH--H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCccccccchhhc-CcccchhHh
Confidence 445554 3 777888998876422 23445667777788888887654333221111 11111 110000 0
Q ss_pred -ccccchhhhccccccceEEEEecCeeeccCchhhhc
Q 037698 81 -VINYSKLRIWEFVEYAKMIYLDGDIQVFENIDHLFE 116 (314)
Q Consensus 81 -~~~y~KL~i~~l~~ydrvlYLD~D~lv~~dideLf~ 116 (314)
...+..=.+++...+++||+||.|+++-.+.=+.|+
T Consensus 85 ~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~ 121 (343)
T 1fo8_A 85 RHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQ 121 (343)
T ss_dssp HHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHH
T ss_pred HHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHH
Confidence 000111122333469999999999999887655443
No 10
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=55.68 E-value=53 Score=29.86 Aligned_cols=82 Identities=16% Similarity=0.152 Sum_probs=45.2
Q ss_pred ccHHHHHHHHHHHHhc-CCCCcEEEEECCCCCHHHHHHHHHcCCEEEEec--ccCCCCchhhhhhcccccccchhhhccc
Q 037698 16 DYVKGVVGLVKGLRKA-KSAYPLAVAVLPDVPADHRKILVSQGCIVREIQ--PVYPPENQTQFAMAYYVINYSKLRIWEF 92 (314)
Q Consensus 16 ~Yl~~~~vl~~SL~~~-~~~~~ivvlv~~~ls~~~~~~L~~~~~~v~~i~--~i~~~~~~~~~~~~~~~~~y~KL~i~~l 92 (314)
.++..++..+.++... .....++ +|+++-++...+.+++.+.+++... .+..+.+.. . ..++-...+.
T Consensus 107 ~~l~~~l~sl~~~l~~~~~~~EII-VVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G-~-------g~A~n~G~~~ 177 (387)
T 3f1y_A 107 DTVGGIIDEIHALNERAPLIDQIL-VVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHG-K-------GDAMWRALSV 177 (387)
T ss_dssp TTHHHHHHHHHHHHHHSCCCSEEE-EEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCS-H-------HHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhcCCCCeEEE-EEcCcCCccHHHHHHHhCchhcccceeEecCCccCC-H-------HHHHHHHHHh
Confidence 5555554444443322 3345544 6777777788888888887765322 111111110 0 1122223333
Q ss_pred cccceEEEEecCee
Q 037698 93 VEYAKMIYLDGDIQ 106 (314)
Q Consensus 93 ~~ydrvlYLD~D~l 106 (314)
...|-|++||+|..
T Consensus 178 A~gd~i~~lDaD~~ 191 (387)
T 3f1y_A 178 TRGDLVLYIDADTR 191 (387)
T ss_dssp CCSSEEEECCTTCS
T ss_pred cCCCEEEEEcCCCC
Confidence 46799999999998
No 11
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=55.68 E-value=18 Score=31.98 Aligned_cols=89 Identities=12% Similarity=0.073 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhcC-CC-CcEEEEECCCCCHHHHHHHHHcCCEEEE-ecccC-CCCchhhhhhcccccccchhhhccccc
Q 037698 19 KGVVGLVKGLRKAK-SA-YPLAVAVLPDVPADHRKILVSQGCIVRE-IQPVY-PPENQTQFAMAYYVINYSKLRIWEFVE 94 (314)
Q Consensus 19 ~~~~vl~~SL~~~~-~~-~~ivvlv~~~ls~~~~~~L~~~~~~v~~-i~~i~-~~~~~~~~~~~~~~~~y~KL~i~~l~~ 94 (314)
..+.-++.||.... +. ..++ +++++-++...+.+++.+..+.. +..+. .+.+.. . ..++-...+...
T Consensus 61 ~~l~~~l~sl~~q~~~~~~eii-vVDdgS~D~t~~~~~~~~~~~~~~~~~~~~~~~n~G-~-------~~a~n~g~~~a~ 131 (329)
T 3ckj_A 61 DTIGSVIDSISPLVDGLVDELI-VLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRPG-K-------GEALWRSLAASR 131 (329)
T ss_dssp TTHHHHHHHHGGGBTTTBSEEE-EEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCCCCS-H-------HHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhhCCCCcEEE-EEeCCCCchHHHHHHHhhhhhccceeeeccCCCCCC-H-------HHHHHHHHHhCC
Confidence 34566778887654 32 4444 67777777788888888776543 33331 121111 1 111222223446
Q ss_pred cceEEEEecCee-ecc-Cchhhhc
Q 037698 95 YAKMIYLDGDIQ-VFE-NIDHLFE 116 (314)
Q Consensus 95 ydrvlYLD~D~l-v~~-dideLf~ 116 (314)
.+-|++||+|.+ +.. -|..+.+
T Consensus 132 gd~i~~lD~D~~~~~p~~l~~l~~ 155 (329)
T 3ckj_A 132 GDIVVFVDSDLINPHPMFVPWLVG 155 (329)
T ss_dssp CSEEEECCTTEESCCTTHHHHHHH
T ss_pred CCEEEEECCCCCCcChHHHHHHHH
Confidence 789999999998 654 4555554
No 12
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=55.42 E-value=26 Score=28.82 Aligned_cols=73 Identities=21% Similarity=0.265 Sum_probs=38.7
Q ss_pred CcccceEEEEecCHHHHHHHHHHHhcCC---CCCCCchh-HHHHHHc---cC-ceecCCcccccccccccCCCCCCCCCe
Q 037698 164 KYFNAGMFVYEPNLLTYSHLLETLKVTP---PSSFAEQD-FLNNFFR---NI-YKPISHTYNFVLAMLWRHPEHVETEKV 235 (314)
Q Consensus 164 ~yfNsGvmli~~~~~~~~~ll~~~~~~~---~~~~~DQd-iLN~~f~---~~-~~~Lp~~yN~~~~~~~~~~~~~~~~~~ 235 (314)
...|+||+++..+.-..+++.=.+.... .+. .+|. +...+|. |+ +..=|..-||.... .|+. .+++
T Consensus 118 ~~lNtGvfL~~~~~~~irncqWSld~~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~ 191 (213)
T 2p6w_A 118 YPINTGVKFVHKDALEIEKIVWSLRNEAPWNTFP-YEQKTVYEYVFPRIPGRYIVHDPYTLNCIVKA---YPEH--VKDA 191 (213)
T ss_dssp SSCCTTEEEEEGGGHHHHHHHHHTTTSTTTTSTT-THHHHHHHTHHHHSTTSEEEECCTTTSEETTT---CTTT--GGGC
T ss_pred ccccceeeeecccchhhhhceeehhhhhcccCCC-cccceeeeeeccCCCcceEecCcceeeeehhh---chhh--hhhh
Confidence 3579999999987744344332222212 222 3554 4444443 22 23344455555421 2332 5678
Q ss_pred EEEEeeC
Q 037698 236 KVVHYCA 242 (314)
Q Consensus 236 ~IiHf~g 242 (314)
..+|.+|
T Consensus 192 ~~~~~~~ 198 (213)
T 2p6w_A 192 LFVHMCG 198 (213)
T ss_dssp SEEECTT
T ss_pred hhhhhcc
Confidence 8999998
No 13
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=54.92 E-value=7.8 Score=36.10 Aligned_cols=87 Identities=13% Similarity=0.042 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhcCC-CCcE-EEEECCCCCH-HHHHHHHHc---CC-EEEEecccCCCCchhhhhhcccccccchhhhcc
Q 037698 19 KGVVGLVKGLRKAKS-AYPL-AVAVLPDVPA-DHRKILVSQ---GC-IVREIQPVYPPENQTQFAMAYYVINYSKLRIWE 91 (314)
Q Consensus 19 ~~~~vl~~SL~~~~~-~~~i-vvlv~~~ls~-~~~~~L~~~---~~-~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~ 91 (314)
..+.-++.||..... ...+ +|+|+++-++ +..+.|++. .. .+..|. .+++.. + .-++-...+
T Consensus 43 ~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~---~~~n~G-~-------~~a~N~g~~ 111 (472)
T 1xhb_A 43 STLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIR---MEQRSG-L-------IRARLKGAA 111 (472)
T ss_dssp HHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEE---CSSCCC-H-------HHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEE---CCCCCC-h-------HHHHHHHHH
Confidence 556677889887643 2212 4466655443 344444432 11 232222 221111 1 112223333
Q ss_pred ccccceEEEEecCeeeccC-chhhhc
Q 037698 92 FVEYAKMIYLDGDIQVFEN-IDHLFE 116 (314)
Q Consensus 92 l~~ydrvlYLD~D~lv~~d-ideLf~ 116 (314)
....|-|++||+|+++..+ |..|.+
T Consensus 112 ~A~gd~i~flD~D~~~~p~~L~~ll~ 137 (472)
T 1xhb_A 112 VSRGQVITFLDAHCECTAGWLEPLLA 137 (472)
T ss_dssp HCCSSEEEEEESSEEECTTCHHHHHH
T ss_pred hccCCeEEEECCCeEeCccHHHHHHH
Confidence 4457899999999998764 444444
No 14
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=50.83 E-value=42 Score=32.30 Aligned_cols=83 Identities=12% Similarity=0.050 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHhcCCCCcE-EEEECCCCCHHHHHHHHHcCC--EEEEecccCCCCchhhhhhcccccccchhhhccccc
Q 037698 18 VKGVVGLVKGLRKAKSAYPL-AVAVLPDVPADHRKILVSQGC--IVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVE 94 (314)
Q Consensus 18 l~~~~vl~~SL~~~~~~~~i-vvlv~~~ls~~~~~~L~~~~~--~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~ 94 (314)
...+..++.||.......++ +++++++-+++..+.+++... .+..+.. +...... ...+-...+...
T Consensus 105 ~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~---~~~~~g~-------~~a~N~g~~~a~ 174 (625)
T 2z86_A 105 AKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQ---KDYGYQL-------CAVRNLGLRAAK 174 (625)
T ss_dssp HHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEE---CCCSCCH-------HHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEe---CCCCcch-------hHHHHHHHHhCC
Confidence 45677788899876432233 446666666666777776531 2222221 1100000 112222333447
Q ss_pred cceEEEEecCeeeccC
Q 037698 95 YAKMIYLDGDIQVFEN 110 (314)
Q Consensus 95 ydrvlYLD~D~lv~~d 110 (314)
.+-|++||+|+++..+
T Consensus 175 g~~v~~lD~D~~~~~~ 190 (625)
T 2z86_A 175 YNYVAILDCDMAPNPL 190 (625)
T ss_dssp SSEEEEECTTEEECTT
T ss_pred cCEEEEECCCCCCCHH
Confidence 8999999999999654
No 15
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=49.35 E-value=75 Score=27.87 Aligned_cols=59 Identities=12% Similarity=0.133 Sum_probs=35.6
Q ss_pred CCcccceEEEEecCH--HHHH----HHHHHHhcCCCCCCCchhHHHHHHc--cCceecCCccccccc
Q 037698 163 PKYFNAGMFVYEPNL--LTYS----HLLETLKVTPPSSFAEQDFLNNFFR--NIYKPISHTYNFVLA 221 (314)
Q Consensus 163 ~~yfNsGvmli~~~~--~~~~----~ll~~~~~~~~~~~~DQdiLN~~f~--~~~~~Lp~~yN~~~~ 221 (314)
.-|+-+|+.==.+.+ ...+ .+++-..++-...+.|..=||.+|- .-.+.|++.|+....
T Consensus 206 dfYY~ga~fGGt~~~vl~Lt~~C~~~i~~D~~n~IeA~WhDESHLNKYfl~hKPtKvLSPEY~Wd~~ 272 (298)
T 3ioh_A 206 DFYYGGAFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYLLRHKPTKVLSPEYLWDQQ 272 (298)
T ss_dssp SCCBCTTEEEEEHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSCCSEEECGGGSBCHH
T ss_pred CeEEeeeecCCcHHHHHHHHHHHHHHHHHHHhCCceEeccchhhhhhhhhhcCCCceeCHHHcCCcc
Confidence 356666666444443 2222 2222222222346899999999986 336889999987653
No 16
>1s4n_A Glycolipid 2-alpha-mannosyltransferase; alpha/beta fold, nucleotide-binding domain, rossmann fold; HET: NAG BMA MAN NDG; 2.01A {Saccharomyces cerevisiae} SCOP: c.68.1.16 PDB: 1s4o_A* 1s4p_A*
Probab=40.73 E-value=88 Score=28.11 Aligned_cols=113 Identities=19% Similarity=0.257 Sum_probs=69.3
Q ss_pred CCeEEEEEeeeCcccHHHHHHHHHHHHhc-CC--CCcEEEEECCCCCHHHHHHHHHc--C-CEEEEecc--cCCCCch--
Q 037698 3 SKRAYVTFLAGNGDYVKGVVGLVKGLRKA-KS--AYPLAVAVLPDVPADHRKILVSQ--G-CIVREIQP--VYPPENQ-- 72 (314)
Q Consensus 3 ~~~A~vT~l~~d~~Yl~~~~vl~~SL~~~-~~--~~~ivvlv~~~ls~~~~~~L~~~--~-~~v~~i~~--i~~~~~~-- 72 (314)
.+.|+|+ |+.|.. +.+++-+++||-.+ |. +||.|.|-+...+++-++.+++. | +++..|.. ...|...
T Consensus 27 ~nAtfV~-L~RN~e-l~~~l~Si~~vE~rFN~~y~YpwvFlNd~pFteeFk~~~~~~~sg~v~Fg~Ip~e~W~~P~~Id~ 104 (348)
T 1s4n_A 27 PKACYVT-LVRNKE-LKGLLSSIKYVENKINKKFPYPWVFLNDEPFTEEFKEAVTKAVSSEVKFGILPKEHWSYPEWINQ 104 (348)
T ss_dssp CCEEEEE-ECCGGG-HHHHHHHHHHHHHHTTTTSCCCEEEEESSCCCHHHHHHHHHHCSSCEEEEECCGGGSSCCTTSCH
T ss_pred CceEEEE-EeccHH-HHHHHHHHHHHHHHhhccCCCCEEEecCCCCCHHHHHHHHHhcCcceEEEEcCHHHcCCCCCcCH
Confidence 3677887 556654 88999999998654 43 68888788788999988888764 2 23333332 2233211
Q ss_pred hhhh------h---cc-cccc---cchh---h---hccccccceEEEEecCeeeccCch-hhhcC
Q 037698 73 TQFA------M---AY-YVIN---YSKL---R---IWEFVEYAKMIYLDGDIQVFENID-HLFEL 117 (314)
Q Consensus 73 ~~~~------~---~~-~~~~---y~KL---~---i~~l~~ydrvlYLD~D~lv~~did-eLf~~ 117 (314)
.... . .+ .... +.|+ + -+.|.+|+-.-=+++|+-+..||+ ++|..
T Consensus 105 ~~a~~~~~~~~~~i~Yg~s~sYr~MCRf~SG~F~~h~~l~~YdyYWRvEPdv~~~CDi~YDpF~~ 169 (348)
T 1s4n_A 105 TKAAEIRADAATKYIYGGSESYRHMCRYQSGFFWRHELLEEYDWYWRVEPDIKLYCDINYDVFKW 169 (348)
T ss_dssp HHHHHHHHHHTTTSTTTTCHHHHHHHHHHHHTGGGSGGGTTCSEEEECCTTCEECSCCCSCHHHH
T ss_pred HHHHHHHHHHhcCCccCCCcchhhhhhhhhhhhccCcccccCceEEEeCCCceeecCCCCCccHH
Confidence 1000 0 00 0001 1122 2 233458999999999999999998 77764
No 17
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=39.74 E-value=35 Score=31.96 Aligned_cols=86 Identities=15% Similarity=0.122 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhcCCC-CcE-EEEECCCCCHHHHHHHHHcCCEEEEecccCCCCchhhhhhcccccccchhhhccccccce
Q 037698 20 GVVGLVKGLRKAKSA-YPL-AVAVLPDVPADHRKILVSQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYAK 97 (314)
Q Consensus 20 ~~~vl~~SL~~~~~~-~~i-vvlv~~~ls~~~~~~L~~~~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~ydr 97 (314)
.+.-++.||...... ..+ +|+|+++-++.....+.+....+.. +..+++.. + .-++-...+....|-
T Consensus 81 ~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~~~v~v---i~~~~n~G-~-------~~A~N~G~~~A~gd~ 149 (501)
T 2ffu_A 81 ALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIEKVRV---LRNDRREG-L-------MRSRVRGADAAQAKV 149 (501)
T ss_dssp HHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGBTTEEE---EECSSCCH-H-------HHHHHHHHHHCCSSE
T ss_pred HHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcCCCEEE---EECCCCcC-H-------HHHHHHHHHhcCCCE
Confidence 456677888866442 212 4466666554443222222222222 22122111 1 122333334446789
Q ss_pred EEEEecCeeeccC-chhhhc
Q 037698 98 MIYLDGDIQVFEN-IDHLFE 116 (314)
Q Consensus 98 vlYLD~D~lv~~d-ideLf~ 116 (314)
|++||+|+.+..+ |..|.+
T Consensus 150 i~flD~D~~~~p~~L~~ll~ 169 (501)
T 2ffu_A 150 LTFLDSHCECNEHWLEPLLE 169 (501)
T ss_dssp EEECCSSEEECTTCHHHHHH
T ss_pred EEEECCCcccCccHHHHHHH
Confidence 9999999998754 344443
No 18
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=37.80 E-value=59 Score=27.73 Aligned_cols=118 Identities=12% Similarity=0.140 Sum_probs=56.0
Q ss_pred ccceEEEEecCeeeccCch-hhh-cCCCCceecccchh-cccCCCCCCcccccccccCCCC-CCCCCCCCCCCCCcccce
Q 037698 94 EYAKMIYLDGDIQVFENID-HLF-ELPNGYLYAAMDCF-CEKTWSNSPQYKIGYCQQCPEK-VKWPASMGSPPPKYFNAG 169 (314)
Q Consensus 94 ~ydrvlYLD~D~lv~~did-eLf-~~~~~~iaAv~d~~-~~~~~~~~~~~~~~~~~~~p~~-~~~p~~~g~~~~~yfNsG 169 (314)
+.|-+..+|+|+++.+++. |.+ -..++.+.|+.-.. -..... .+.-+. .|.. .-.|... ..-|+-+|
T Consensus 87 evDyLf~~dvd~~F~~~vG~E~L~p~~~~~lva~lHp~~y~~~~~---~fpYER---rp~S~AyIp~~e---GdfYY~ga 157 (246)
T 4ayl_A 87 ETDYLFFFNANLLFTSPIGKEILPPSDSNGLLGTMHPGFYNKPNS---EFTYER---RDASTAYIPEGE---GRYYYAGG 157 (246)
T ss_dssp HCSEEEEECTTEEECSCBCGGGSCCTTSCCEEEEBCGGGC---------------------------------CCCBCSS
T ss_pred hCCEEEEEeCCceeeccCCHHHcccCCCCCEEEEechhhhCCCcc---cCcccC---CccccccccCCC---CCeEEeee
Confidence 4899999999999999886 332 22222233432211 000000 000010 0100 0111111 23566666
Q ss_pred EEEEecCH--HHHHHH----HHHHhcCCCCCCCchhHHHHHHc-cCce-ecCCcccccc
Q 037698 170 MFVYEPNL--LTYSHL----LETLKVTPPSSFAEQDFLNNFFR-NIYK-PISHTYNFVL 220 (314)
Q Consensus 170 vmli~~~~--~~~~~l----l~~~~~~~~~~~~DQdiLN~~f~-~~~~-~Lp~~yN~~~ 220 (314)
+.==.+.. ...+.+ ++-..++-...+.|..-||.+|- .+-. .||+.|+...
T Consensus 158 ~fGG~~~~vl~Lt~~c~~~i~~D~~n~I~A~whDESHLNKYfl~~KP~~vLSPEY~wd~ 216 (246)
T 4ayl_A 158 LSGGCTKAYLKLCTTICSWVDRDATNHIIPIWHDESLINKYFLDNPPAITLSPAYLYPE 216 (246)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHTTCSSCSCCHHHHHHHHHHHSCCSEEECGGGGEET
T ss_pred ecCCcHHHHHHHHHHHHHHHHHHHhCCceEeccchhHhHHHHHhCCCCeeeCHHHcCCc
Confidence 66444443 222222 22222222346899999999976 3444 4999998654
No 19
>1loi_A Cyclic 3',5'-AMP specific phosphodiesterase RD1; hydrolase, C-AMP phosphodiesterase; NMR {Rattus norvegicus} SCOP: j.51.1.1
Probab=23.09 E-value=29 Score=17.92 Aligned_cols=7 Identities=57% Similarity=1.042 Sum_probs=5.2
Q ss_pred CCCCCCc
Q 037698 244 GSKPWRY 250 (314)
Q Consensus 244 ~~KPW~~ 250 (314)
..|||..
T Consensus 11 cskpwlv 17 (26)
T 1loi_A 11 CSKPWLV 17 (26)
T ss_dssp SSCTTGG
T ss_pred cCCchhh
Confidence 4799976
No 20
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=21.25 E-value=1.1e+02 Score=29.17 Aligned_cols=79 Identities=16% Similarity=0.040 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhc-CCCCcEEEEECCCCCHHHHHHHHHc---CCEEEEecccCCCCchhhhhhcccccccchhhhccccc
Q 037698 19 KGVVGLVKGLRKA-KSAYPLAVAVLPDVPADHRKILVSQ---GCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVE 94 (314)
Q Consensus 19 ~~~~vl~~SL~~~-~~~~~ivvlv~~~ls~~~~~~L~~~---~~~v~~i~~i~~~~~~~~~~~~~~~~~y~KL~i~~l~~ 94 (314)
..+.-++.||... .++.. +++++++-++...+.+++. ...+..+.. .+. .+. .++-...+...
T Consensus 388 ~~l~~~l~s~~~q~~~~~e-iivvdd~S~d~t~~~~~~~~~~~~~i~~~~~----~n~-G~~-------~a~n~g~~~a~ 454 (625)
T 2z86_A 388 KYIVRCVESALNQTITDLE-VCICDDGSTDDTLRILQEHYANHPRVRFISQ----KNK-GIG-------SASNTAVRLCR 454 (625)
T ss_dssp TTHHHHHHHHHSSSCCSEE-EEEEEESCSSSHHHHHHHHHTTCTTEEEEEE----CCC-CHH-------HHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCcCCCeE-EEEEECcCChhHHHHHHHHHhhCCcEEEEeC----CCC-CHH-------HHHHHHHHhcC
Confidence 3456667788754 33334 3456666555555666553 222322221 111 111 11222223345
Q ss_pred cceEEEEecCeeeccC
Q 037698 95 YAKMIYLDGDIQVFEN 110 (314)
Q Consensus 95 ydrvlYLD~D~lv~~d 110 (314)
.|-|++||+|.++..+
T Consensus 455 g~~i~~ld~D~~~~~~ 470 (625)
T 2z86_A 455 GFYIGQLDSDDFLEPD 470 (625)
T ss_dssp SSEEEECCTTCEECTT
T ss_pred CCEEEEECCCcccChh
Confidence 6889999999998654
Done!