Query 037700
Match_columns 309
No_of_seqs 116 out of 158
Neff 3.5
Searched_HMMs 29240
Date Mon Mar 25 05:22:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037700.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037700hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fv2_A RCD1 required for cell 100.0 8E-120 3E-124 838.4 15.7 256 24-304 1-256 (268)
2 4db6_A Armadillo repeat protei 96.8 0.027 9.2E-07 45.7 12.5 185 37-273 25-210 (210)
3 4hxt_A De novo protein OR329; 96.6 0.032 1.1E-06 45.6 11.8 203 27-281 3-209 (252)
4 1xqr_A HSPBP1 protein; armadil 95.9 0.11 3.8E-06 47.4 12.8 198 23-273 25-239 (296)
5 4db8_A Armadillo-repeat protei 95.7 0.18 6.3E-06 41.7 12.5 192 37-281 25-219 (252)
6 4db6_A Armadillo repeat protei 95.2 0.09 3.1E-06 42.5 8.5 132 133-281 45-177 (210)
7 4db8_A Armadillo-repeat protei 95.1 0.29 1E-05 40.5 11.7 128 122-272 122-251 (252)
8 4hxt_A De novo protein OR329; 95.0 0.13 4.5E-06 41.9 9.1 130 122-274 112-243 (252)
9 4b8j_A Importin subunit alpha- 94.6 0.47 1.6E-05 44.2 12.7 147 133-293 362-516 (528)
10 4b8j_A Importin subunit alpha- 93.8 0.78 2.7E-05 42.7 12.5 198 25-275 73-276 (528)
11 1wa5_B Importin alpha subunit; 92.0 0.74 2.5E-05 43.1 9.6 85 133-225 374-460 (530)
12 2jdq_A Importin alpha-1 subuni 91.2 0.61 2.1E-05 41.5 7.8 85 133-225 309-393 (450)
13 2z6h_A Catenin beta-1, beta-ca 90.8 2.1 7.1E-05 41.6 11.7 205 27-282 15-222 (644)
14 2jdq_A Importin alpha-1 subuni 89.0 1.3 4.6E-05 39.3 8.1 118 140-272 271-390 (450)
15 1jdh_A Beta-catenin; beta-cate 86.2 15 0.00051 33.5 13.4 154 26-222 17-172 (529)
16 1xm9_A Plakophilin 1; armadill 86.0 3.6 0.00012 38.7 9.5 133 133-283 35-183 (457)
17 1wa5_B Importin alpha subunit; 83.7 2.5 8.6E-05 39.5 7.3 82 133-223 332-413 (530)
18 2z6h_A Catenin beta-1, beta-ca 82.2 18 0.00062 35.0 12.8 101 163-274 429-529 (644)
19 1xqr_A HSPBP1 protein; armadil 80.2 9.6 0.00033 34.6 9.6 82 133-223 158-239 (296)
20 3nmw_A APC variant protein; AR 79.9 4.1 0.00014 37.9 7.2 158 89-280 42-209 (354)
21 1jdh_A Beta-catenin; beta-cate 79.0 21 0.0007 32.5 11.4 85 133-223 299-386 (529)
22 3ul1_B Importin subunit alpha- 78.9 22 0.00077 33.6 12.0 81 133-222 307-387 (510)
23 3tpo_A Importin subunit alpha- 77.3 15 0.00053 34.7 10.4 81 133-222 326-406 (529)
24 3nmz_A APC variant protein; pr 70.6 9.8 0.00034 36.9 7.4 143 122-280 174-325 (458)
25 3nmw_A APC variant protein; AR 67.6 15 0.00051 34.1 7.6 82 133-223 254-335 (354)
26 1b3u_A Protein (protein phosph 67.5 36 0.0012 31.1 10.1 67 149-221 126-192 (588)
27 3tpo_A Importin subunit alpha- 67.2 52 0.0018 31.1 11.4 78 140-223 288-365 (529)
28 3ul1_B Importin subunit alpha- 66.4 57 0.0019 30.8 11.5 78 140-223 269-346 (510)
29 2z6g_A B-catenin; FULL-length, 66.2 71 0.0024 32.3 12.8 101 163-274 565-665 (780)
30 4fdd_A Transportin-1; heat rep 56.6 32 0.0011 34.2 8.1 58 163-220 599-656 (852)
31 3nmz_A APC variant protein; pr 55.3 23 0.0008 34.3 6.8 87 133-229 370-456 (458)
32 1xm9_A Plakophilin 1; armadill 52.7 25 0.00086 32.9 6.4 109 163-280 15-124 (457)
33 3tt9_A Plakophilin-2; cell adh 49.7 40 0.0014 29.8 6.9 133 133-283 43-192 (233)
34 1ibr_B P95, importin beta-1 su 46.9 1.5E+02 0.0051 26.0 10.4 52 168-223 107-160 (462)
35 2z6g_A B-catenin; FULL-length, 46.2 28 0.00096 35.2 6.0 89 122-225 578-666 (780)
36 3l6x_A Catenin delta-1; cateni 44.5 1.2E+02 0.0041 30.5 10.2 140 122-283 74-233 (584)
37 1w63_A Adapter-related protein 40.8 2.5E+02 0.0086 27.3 11.6 60 162-224 191-265 (618)
38 3now_A UNC-45 protein, SD10334 40.4 82 0.0028 33.1 8.5 135 116-272 601-737 (810)
39 4gmo_A Putative uncharacterize 38.7 79 0.0027 31.5 7.8 143 124-282 62-225 (684)
40 2vgl_A Adaptor protein complex 37.1 2.5E+02 0.0086 27.6 11.0 138 28-190 113-281 (621)
41 1wa5_C Importin alpha RE-expor 34.4 3.8E+02 0.013 27.2 12.1 144 24-222 3-152 (960)
42 1w63_A Adapter-related protein 34.1 49 0.0017 32.4 5.4 56 161-224 118-173 (618)
43 3tt9_A Plakophilin-2; cell adh 32.9 1.3E+02 0.0044 26.5 7.4 108 165-281 25-133 (233)
44 3dev_A SH1221; alpha-beta prot 28.9 60 0.002 29.9 4.7 78 193-271 128-211 (320)
45 1qgr_A Protein (importin beta 28.4 2.7E+02 0.0091 27.0 9.3 52 168-223 107-160 (876)
46 3now_A UNC-45 protein, SD10334 28.2 5.4E+02 0.018 27.0 17.5 212 39-282 165-418 (810)
47 2bpt_A Importin beta-1 subunit 27.7 3.1E+02 0.011 26.4 9.7 182 24-270 2-208 (861)
48 4gmo_A Putative uncharacterize 26.3 82 0.0028 31.4 5.5 162 39-230 91-266 (684)
49 1qgr_A Protein (importin beta 24.6 14 0.00048 35.9 -0.3 58 163-221 811-870 (876)
50 3l6x_A Catenin delta-1; cateni 23.2 2.1E+02 0.0073 28.7 7.9 107 166-281 64-172 (584)
51 4fdd_A Transportin-1; heat rep 21.8 1.2E+02 0.0041 30.1 5.6 105 162-278 186-291 (852)
52 3gs3_A Symplekin, LD45768P; he 21.2 3.7E+02 0.013 24.2 8.4 115 25-207 14-130 (257)
53 1ibr_B P95, importin beta-1 su 20.6 67 0.0023 28.2 3.2 58 163-221 143-202 (462)
No 1
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.5e-120 Score=838.44 Aligned_cols=256 Identities=52% Similarity=0.851 Sum_probs=253.2
Q ss_pred ChhHHHHHHHHhcCcchHHHHHHHHHhcccccCchhhHhhhhhchHHHHHHHHHHhhccCCCCCCChhhhhhHHHHHHhh
Q 037700 24 GPASVAYWIQALQSHETKERALLILSQNKEIRKDLAPLLWNSIGTISALLQEIISVYRTLSSPNLTETASTRVSNALALF 103 (309)
Q Consensus 24 ~~~~v~q~I~~L~~~~~Re~AL~eLsk~re~~~dLap~LW~S~Gtia~LLQEIisvYp~Ls~p~Lt~~~SnRVcnaLaLl 103 (309)
|+++++|||.||++|++||+||+||||+||++|||||+||||||||++|||||+++||+++||+||+++|||||||||||
T Consensus 1 ~~~~i~qli~~L~~p~~Re~AL~eLsk~Re~~~~La~~LW~S~Gtia~LLQEIisiYp~lspp~Lt~~~SnRVcnaLaLl 80 (268)
T 2fv2_A 1 DREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALL 80 (268)
T ss_dssp -CHHHHHHHHHTSSTTTHHHHHHHHHHHTTTCTTHHHHHHHSTTHHHHHHHHHHHTGGGBTTBCCCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHhcCchhHHHHHHHHHHhhhccccHHHHHHhccCHHHHHHHHHHHHcccCCCcccCHHHHhHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCchhhhhhhcccccccccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChh
Q 037700 104 QVTFTSIGSSFAILKVYNCMATFRAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDP 183 (309)
Q Consensus 104 Q~~~~~~~~~~~~~~~~~cvAshp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~ 183 (309)
| |||||| |||. +||+||||+||||||||++|+|||||||||||||||||||+||+
T Consensus 81 Q-----------------cvAshp-----etr~---~Fl~a~iplyLyPfL~t~sk~r~fE~LRLtsLGVIgaLvK~dd~ 135 (268)
T 2fv2_A 81 Q-----------------CVASHP-----ETRS---AFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQ 135 (268)
T ss_dssp H-----------------HHHHCT-----TTHH---HHHHTTGGGGTHHHHHCCCCSHHHHHHHHHHHHHHHHHGGGCCH
T ss_pred H-----------------HHHcCc-----chhh---HHHHccchHHhhhhhccccCCCcchhhhhhHHHHHHHHhccCcH
Confidence 9 999999 9999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccccccccccchhhHHHHHHHHHHHhcccccchhhhhhhhhHHHHHHHHHHHHHHHhhCCCchhHHHH
Q 037700 184 EAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKILLHEEGLKYCCVLADRFFAVARALAQMTEKLVEQPSPRLLKHI 263 (309)
Q Consensus 184 evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL~~d~GL~YiC~t~eRF~aV~~vL~~mv~~l~~~ps~RLLKhI 263 (309)
|||+||++|||||+|||+||.|||+||||||||+||||+||+||+|+|+|+|||+||++||++||++++++||+||||||
T Consensus 136 eVi~fLL~tEiiplCLrime~GselSKtvAtfIlqKIL~dd~GL~YiC~t~eRF~av~~vL~~mV~~l~~~ps~RLLKhi 215 (268)
T 2fv2_A 136 EVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHV 215 (268)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHSHHHHHHHTSSHHHHHHHHHHHHHHHHHTTTSCCHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHhhccHHHHHHHHHHHHHHhccchhHHHHHccHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCChhhHhhhhhcCCccccchhhhhhhccCCCCC
Q 037700 264 ICCYHRLSQSPRACDGLRCCLPLWFGDRKFTSQLHVRSSKT 304 (309)
Q Consensus 264 IrCY~RLs~n~rar~aLr~~LP~~Lrd~~f~~~l~~d~~~~ 304 (309)
||||+|||||||||++|++|||++|||++|++++++|+.++
T Consensus 216 ircYlRLsdn~rar~aL~~~LP~~Lrd~tf~~~l~~D~~~k 256 (268)
T 2fv2_A 216 VRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTK 256 (268)
T ss_dssp HHHHHHHTTSHHHHHHHHHHSCGGGTSSTTHHHHTSCHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHhCcHHhhChHHHHHHhcCHHHH
Confidence 99999999999999999999999999999999999999775
No 2
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=96.76 E-value=0.027 Score=45.67 Aligned_cols=185 Identities=18% Similarity=0.184 Sum_probs=119.1
Q ss_pred CcchHHHHHHHHHhcccccCchhhHhhhhhchHHHHHHHHHHhhccCCCCCCChhhhhhHHHHHHhhhhhhcccCchhhh
Q 037700 37 SHETKERALLILSQNKEIRKDLAPLLWNSIGTISALLQEIISVYRTLSSPNLTETASTRVSNALALFQVTFTSIGSSFAI 116 (309)
Q Consensus 37 ~~~~Re~AL~eLsk~re~~~dLap~LW~S~Gtia~LLQEIisvYp~Ls~p~Lt~~~SnRVcnaLaLlQ~~~~~~~~~~~~ 116 (309)
+++.|+.|+..|+.--...++....+... |.+..|++=+ ..+ ...-| .+|+..+.
T Consensus 25 ~~~v~~~a~~~L~~l~~~~~~~~~~i~~~-g~i~~L~~lL-------~~~----~~~v~-~~a~~~L~------------ 79 (210)
T 4db6_A 25 DQQELQSALRKLSQIASGGNEQIQAVIDA-GALPALVQLL-------SSP----NEQIL-QEALWALS------------ 79 (210)
T ss_dssp CHHHHHHHHHHHHHHHTSCHHHHHHHHHT-THHHHHHHHT-------TCS----CHHHH-HHHHHHHH------------
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHHHHc-CCHHHHHHHH-------cCC----CHHHH-HHHHHHHH------------
Confidence 55677777776655433333333333333 6666665432 222 11112 23444444
Q ss_pred hhhccccc-ccccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhcccc
Q 037700 117 LKVYNCMA-TFRAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIF 195 (309)
Q Consensus 117 ~~~~~cvA-shp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEii 195 (309)
.++ .++ +.+. .++++...-.|..+|+.. .+.+|-...++++.+.. ++++....+.+...+
T Consensus 80 -----~l~~~~~-----~~~~---~i~~~g~i~~L~~lL~~~-----~~~v~~~a~~~L~~l~~-~~~~~~~~~~~~~~i 140 (210)
T 4db6_A 80 -----NIASGGN-----EQIQ---AVIDAGALPALVQLLSSP-----NEQILQEALWALSNIAS-GGNEQIQAVIDAGAL 140 (210)
T ss_dssp -----HHTTSCH-----HHHH---HHHHTTCHHHHHHHTTCS-----CHHHHHHHHHHHHHHTT-SCHHHHHHHHHTTHH
T ss_pred -----HHhcCCc-----HHHH---HHHHCCCHHHHHHHHcCC-----cHHHHHHHHHHHHHHHc-CCHHHHHHHHHcCcH
Confidence 444 344 7777 788888777777777654 36889999999999987 456667778899999
Q ss_pred ccccccccccchhhHHHHHHHHHHHhcccccchhhhhhhhhHHHHHHHHHHHHHHHhhCCCchhHHHHHHHHHHhcCC
Q 037700 196 PCCLTSMEVGSDLSKQVATFIIYKILLHEEGLKYCCVLADRFFAVARALAQMTEKLVEQPSPRLLKHIICCYHRLSQS 273 (309)
Q Consensus 196 PlCLriME~GSelSKtvAtfIlqKIL~~d~GL~YiC~t~eRF~aV~~vL~~mv~~l~~~ps~RLLKhIIrCY~RLs~n 273 (309)
|..++.++.++.-.+..|...+..+..+..... +.+ .-..++..+ ..+...+++++-++...+-.+|+++
T Consensus 141 ~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~------~~~-~~~g~i~~L-~~ll~~~~~~v~~~a~~aL~~l~~~ 210 (210)
T 4db6_A 141 PALVQLLSSPNEQILQEALWALSNIASGGNEQK------QAV-KEAGALEKL-EQLQSHENEKIQKEAQEALEKLQSH 210 (210)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHH------HHH-HHTTHHHHH-HHGGGCSCHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHHH------HHH-HHCCCHHHH-HHHHhCCCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999998876633211 011 111233333 3455678999999998888888764
No 3
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=96.58 E-value=0.032 Score=45.59 Aligned_cols=203 Identities=12% Similarity=0.091 Sum_probs=130.2
Q ss_pred HHHHHHHHhcCc--chHHHHHHHHHhcccccCchhhHhhhhhchHHHHHHHHHHhhccCCCCCCChhhhhhHHHHHHhhh
Q 037700 27 SVAYWIQALQSH--ETKERALLILSQNKEIRKDLAPLLWNSIGTISALLQEIISVYRTLSSPNLTETASTRVSNALALFQ 104 (309)
Q Consensus 27 ~v~q~I~~L~~~--~~Re~AL~eLsk~re~~~dLap~LW~S~Gtia~LLQEIisvYp~Ls~p~Lt~~~SnRVcnaLaLlQ 104 (309)
.+..++.-|.++ +.|..|+..|..--...++-...+- .-|.+..|++-+ ..++ .. -..+++..|.
T Consensus 3 ~i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~-~~g~i~~L~~ll-------~~~~--~~---v~~~a~~~L~ 69 (252)
T 4hxt_A 3 DVEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIV-DAGGVEVLVKLL-------TSTD--SE---VQKEAARALA 69 (252)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHH-HTTHHHHHHHHT-------TCSC--HH---HHHHHHHHHH
T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHH-HCCCHHHHHHHH-------hCCC--HH---HHHHHHHHHH
Confidence 355666666644 5566666666543322222222222 236666666433 3222 11 1223444444
Q ss_pred hhhcccCchhhhhhhccccccc-ccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChh
Q 037700 105 VTFTSIGSSFAILKVYNCMATF-RAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDP 183 (309)
Q Consensus 105 ~~~~~~~~~~~~~~~~~cvAsh-p~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~ 183 (309)
.++.+ + +.|. .+++.+..-.|..+|+. +.+.+|-..+++++.|.. .++
T Consensus 70 -----------------~l~~~~~-----~~~~---~~~~~~~i~~l~~ll~~-----~~~~v~~~a~~~L~~l~~-~~~ 118 (252)
T 4hxt_A 70 -----------------NIASGPD-----EAIK---AIVDAGGVEVLVKLLTS-----TDSEVQKEAARALANIAS-GPD 118 (252)
T ss_dssp -----------------HHTTSCH-----HHHH---HHHHTTHHHHHHHHTTC-----SSHHHHHHHHHHHHHHTT-SCH
T ss_pred -----------------HHHcCCh-----HHHH---HHHHCCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHHc-CCH
Confidence 44555 6 8888 88888776667777763 347899999999999986 356
Q ss_pred HHHHHHhhccccccccccccccchhhHHHHHHHHHHHhcccccchhhhhhhhhHHHHHHHHHHHHHHHhhCCCchhHHHH
Q 037700 184 EAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKILLHEEGLKYCCVLADRFFAVARALAQMTEKLVEQPSPRLLKHI 263 (309)
Q Consensus 184 evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL~~d~GL~YiC~t~eRF~aV~~vL~~mv~~l~~~ps~RLLKhI 263 (309)
+....+.+...+|..++.++.+++-.+.-|...+..+..++.+..- .+.. ..++..++. +...+++.+-+..
T Consensus 119 ~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~------~~~~-~~~i~~L~~-ll~~~~~~v~~~a 190 (252)
T 4hxt_A 119 EAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIK------AIVD-AGGVEVLVK-LLTSTDSEVQKEA 190 (252)
T ss_dssp HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHH------HHHH-TTHHHHHHH-HTTCSCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHH------HHHH-CcCHHHHHH-HHCCCCHHHHHHH
Confidence 6777888889999999999999999999999999998775443211 1111 223343333 4457889999999
Q ss_pred HHHHHHhcC-ChhhHhhhh
Q 037700 264 ICCYHRLSQ-SPRACDGLR 281 (309)
Q Consensus 264 IrCY~RLs~-n~rar~aLr 281 (309)
.++-..|+. ++..+..+.
T Consensus 191 ~~~L~~l~~~~~~~~~~l~ 209 (252)
T 4hxt_A 191 ARALANIASGPTSAIKAIV 209 (252)
T ss_dssp HHHHHHHTTSBHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHH
Confidence 999999987 666555443
No 4
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=95.91 E-value=0.11 Score=47.42 Aligned_cols=198 Identities=15% Similarity=0.183 Sum_probs=133.2
Q ss_pred CChhHHHHHHHHhcCc--------------chHHHHHHHHHhcccccCchhhHhhhhhchHHHHHHHHHHhhccCCCCCC
Q 037700 23 HGPASVAYWIQALQSH--------------ETKERALLILSQNKEIRKDLAPLLWNSIGTISALLQEIISVYRTLSSPNL 88 (309)
Q Consensus 23 ~~~~~v~q~I~~L~~~--------------~~Re~AL~eLsk~re~~~dLap~LW~S~Gtia~LLQEIisvYp~Ls~p~L 88 (309)
.+.+.|...+.-|.+| +.|+.|+..|...-+.. |-|..+ ...|.+..|++ +.|.+++
T Consensus 25 d~~~~mk~~l~vl~~~~~~~~~~~~~~~~~e~k~~Al~~L~~lv~~~-dna~~~-~~~G~l~~Lv~------~lL~s~~- 95 (296)
T 1xqr_A 25 GEVEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENM-DNAADF-CQLSGMHLLVG------RYLEAGA- 95 (296)
T ss_dssp HHHHHHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHTSH-HHHHHH-HHTTHHHHHHH------TTTTCSS-
T ss_pred CHHHHHHHHHHHHhCCCcccccccccCCCHHHHHHHHHHHHHHHhCh-hhHHHH-HHcCCHHHHHH------HHHcCCC-
Confidence 3566677777778877 57888998888876654 345444 57788887776 4555542
Q ss_pred ChhhhhhHHHHHHhhhhhhcccCchhhhhhhccccc-ccccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchh
Q 037700 89 TETASTRVSNALALFQVTFTSIGSSFAILKVYNCMA-TFRAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLR 167 (309)
Q Consensus 89 t~~~SnRVcnaLaLlQ~~~~~~~~~~~~~~~~~cvA-shp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLR 167 (309)
+..-...+.+| - .+| .+| +.|. .++++...-.|...|+.. +-+.+|
T Consensus 96 -~~vr~~Aa~~L---g-----------------~ia~~n~-----~~~~---~vv~~g~l~~Ll~LL~~~----~~~~v~ 142 (296)
T 1xqr_A 96 -AGLRWRAAQLI---G-----------------TCSQNVA-----AIQE---QVLGLGALRKLLRLLDRD----ACDTVR 142 (296)
T ss_dssp -HHHHHHHHHHH---H-----------------HHHTTCH-----HHHH---HHHHTTHHHHHHHHHHHC----SCHHHH
T ss_pred -HHHHHHHHHHH---H-----------------HHHhCCH-----HHHH---HHHHCCCHHHHHHHHccC----CCHHHH
Confidence 21122233333 3 333 455 8888 888888777777777642 236788
Q ss_pred hhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHHHhcccccchhhhhhhhhHHHH--HHHHH
Q 037700 168 LTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKILLHEEGLKYCCVLADRFFAV--ARALA 245 (309)
Q Consensus 168 LtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL~~d~GL~YiC~t~eRF~aV--~~vL~ 245 (309)
-..+..++.+++...+ ...-+.....+|.+.+.+..++...|.-|.+.+..+..++. +.-.++ ..++.
T Consensus 143 ~~A~~ALsnl~~~~~~-~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~---------~~~~~vv~~g~i~ 212 (296)
T 1xqr_A 143 VKALFAISCLVREQEA-GLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHP---------EHKGTLCSMGMVQ 212 (296)
T ss_dssp HHHHHHHHHHHTTCHH-HHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCG---------GGHHHHHHTTHHH
T ss_pred HHHHHHHHHHHcCCcH-HHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCh---------HHHHHHHHcCCHH
Confidence 8999999999986554 44444557899999999999999999999999998876532 111111 12344
Q ss_pred HHHHHHhhCCCchhHHHHHHHHHHhcCC
Q 037700 246 QMTEKLVEQPSPRLLKHIICCYHRLSQS 273 (309)
Q Consensus 246 ~mv~~l~~~ps~RLLKhIIrCY~RLs~n 273 (309)
.++. |...+++.+..+..++-..|..+
T Consensus 213 ~Lv~-LL~~~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 213 QLVA-LVRTEHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHH-HHTSCCSTHHHHHHHHHHHHHTT
T ss_pred HHHH-HHcCCChhHHHHHHHHHHHHHhC
Confidence 4333 44567888888888888777665
No 5
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=95.75 E-value=0.18 Score=41.73 Aligned_cols=192 Identities=17% Similarity=0.200 Sum_probs=123.3
Q ss_pred CcchHHHHHHHHHhcccccCchhhHhhhhhchHHHHHHHHHHhhccCCCCCCChhhhhhHHHHHHhhhhhhcccCchhhh
Q 037700 37 SHETKERALLILSQNKEIRKDLAPLLWNSIGTISALLQEIISVYRTLSSPNLTETASTRVSNALALFQVTFTSIGSSFAI 116 (309)
Q Consensus 37 ~~~~Re~AL~eLsk~re~~~dLap~LW~S~Gtia~LLQEIisvYp~Ls~p~Lt~~~SnRVcnaLaLlQ~~~~~~~~~~~~ 116 (309)
+++.|..|...|.+.-...++-...+. ..|.+..|++= +..++ ..-..+|+..+.
T Consensus 25 ~~~~~~~a~~~L~~~l~~~~~~~~~~~-~~g~i~~L~~l-------L~~~~-----~~v~~~a~~~L~------------ 79 (252)
T 4db8_A 25 DMQEQLSATRKFSQILSDGNEQIQAVI-DAGALPALVQL-------LSSPN-----EQILQEALWALS------------ 79 (252)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHH-HTTHHHHHHHG-------GGCSC-----HHHHHHHHHHHH------------
T ss_pred CHHHHHHHHHHHHHHHcCCCchHHHHH-HcCcHHHHHHH-------HcCCC-----HHHHHHHHHHHH------------
Confidence 557788888777542221111112222 23666666543 23222 122234444455
Q ss_pred hhhcccccc-cccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhcccc
Q 037700 117 LKVYNCMAT-FRAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIF 195 (309)
Q Consensus 117 ~~~~~cvAs-hp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEii 195 (309)
.++. ++ +.|. .++++..--.|..+|+. +.+.+|-..++++|.|...++ ..+..+.+...+
T Consensus 80 -----~l~~~~~-----~~~~---~i~~~g~i~~L~~lL~~-----~~~~v~~~a~~~L~~l~~~~~-~~~~~~~~~~~i 140 (252)
T 4db8_A 80 -----NIASGGN-----EQIQ---AVIDAGALPALVQLLSS-----PNEQILQEALWALSNIASGGN-EQIQAVIDAGAL 140 (252)
T ss_dssp -----HHTTSCH-----HHHH---HHHHTTHHHHHHHGGGC-----SCHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTHH
T ss_pred -----HHhcCCH-----HHHH---HHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHhhcCCc-hHHHHHHHCCCH
Confidence 4554 45 7787 88888766666677764 357899999999999987544 334677888999
Q ss_pred ccccccccccchhhHHHHHHHHHHHhcccccc-hhhhhhhhhHHHHHHHHHHHHHHHhhCCCchhHHHHHHHHHHhc-CC
Q 037700 196 PCCLTSMEVGSDLSKQVATFIIYKILLHEEGL-KYCCVLADRFFAVARALAQMTEKLVEQPSPRLLKHIICCYHRLS-QS 273 (309)
Q Consensus 196 PlCLriME~GSelSKtvAtfIlqKIL~~d~GL-~YiC~t~eRF~aV~~vL~~mv~~l~~~ps~RLLKhIIrCY~RLs-~n 273 (309)
|..++.++.++.-.+.-|...+..+..++... ..+. -..++..++ .+...+++.+.++..++-..|+ .+
T Consensus 141 ~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~--------~~~~i~~L~-~ll~~~~~~v~~~a~~~L~~l~~~~ 211 (252)
T 4db8_A 141 PALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVI--------DAGALPALV-QLLSSPNEQILQEALWALSNIASGG 211 (252)
T ss_dssp HHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHH--------HTTCHHHHH-HGGGCSSHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHH--------HCCCHHHHH-HHHCCCCHHHHHHHHHHHHHHhcCC
Confidence 99999999999988999999999987654221 1111 022333444 3456789999999999999998 46
Q ss_pred hhhHhhhh
Q 037700 274 PRACDGLR 281 (309)
Q Consensus 274 ~rar~aLr 281 (309)
+..+..+.
T Consensus 212 ~~~~~~~~ 219 (252)
T 4db8_A 212 NEQKQAVK 219 (252)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665554
No 6
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=95.18 E-value=0.09 Score=42.53 Aligned_cols=132 Identities=13% Similarity=0.179 Sum_probs=96.8
Q ss_pred hhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHH
Q 037700 133 MTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQV 212 (309)
Q Consensus 133 eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtv 212 (309)
+.+. .++++..--.|..+|+.. .+.+|-..++++|.+... +++....+.+...+|..++.++.++.-.+.-
T Consensus 45 ~~~~---~i~~~g~i~~L~~lL~~~-----~~~v~~~a~~~L~~l~~~-~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~ 115 (210)
T 4db6_A 45 EQIQ---AVIDAGALPALVQLLSSP-----NEQILQEALWALSNIASG-GNEQIQAVIDAGALPALVQLLSSPNEQILQE 115 (210)
T ss_dssp HHHH---HHHHTTHHHHHHHHTTCS-----CHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTCHHHHHHHTTCSCHHHHHH
T ss_pred HHHH---HHHHcCCHHHHHHHHcCC-----CHHHHHHHHHHHHHHhcC-CcHHHHHHHHCCCHHHHHHHHcCCcHHHHHH
Confidence 7777 888887776777777643 567899999999999854 4556677788999999999999999999999
Q ss_pred HHHHHHHHhcccccchhhhhhhhhHHHHHHHHHHHHHHHhhCCCchhHHHHHHHHHHhcCC-hhhHhhhh
Q 037700 213 ATFIIYKILLHEEGLKYCCVLADRFFAVARALAQMTEKLVEQPSPRLLKHIICCYHRLSQS-PRACDGLR 281 (309)
Q Consensus 213 AtfIlqKIL~~d~GL~YiC~t~eRF~aV~~vL~~mv~~l~~~ps~RLLKhIIrCY~RLs~n-~rar~aLr 281 (309)
|...+..+..++..-.-... -..++..++. +.+.+++.+-++...+-..|+.+ +..+..+.
T Consensus 116 a~~~L~~l~~~~~~~~~~~~-------~~~~i~~L~~-ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~ 177 (210)
T 4db6_A 116 ALWALSNIASGGNEQIQAVI-------DAGALPALVQ-LLSSPNEQILQEALWALSNIASGGNEQKQAVK 177 (210)
T ss_dssp HHHHHHHHTTSCHHHHHHHH-------HTTHHHHHHH-HTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHH-------HcCcHHHHHH-HHcCCCHHHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 99999998765432211100 0123344443 44567999999999999999987 66665443
No 7
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=95.13 E-value=0.29 Score=40.52 Aligned_cols=128 Identities=16% Similarity=0.166 Sum_probs=89.9
Q ss_pred cccccccccchhhH-HHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccc
Q 037700 122 CMATFRAIKSSMTR-LISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLT 200 (309)
Q Consensus 122 cvAshp~~~~~eTR-~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLr 200 (309)
.++.++ +.+ . .++++...-.|..+|+. +.+.+|-..+++++.|...+ ++....+.+...+|..++
T Consensus 122 ~l~~~~-----~~~~~---~~~~~~~i~~L~~lL~~-----~~~~v~~~a~~~L~~l~~~~-~~~~~~~~~~~~i~~L~~ 187 (252)
T 4db8_A 122 NIASGG-----NEQIQ---AVIDAGALPALVQLLSS-----PNEQILQEALWALSNIASGG-NEQIQAVIDAGALPALVQ 187 (252)
T ss_dssp HHTTSC-----HHHHH---HHHHTTHHHHHHHGGGC-----SCHHHHHHHHHHHHHHTTSC-HHHHHHHHHTTCHHHHHH
T ss_pred HhhcCC-----chHHH---HHHHCCCHHHHHHHHhC-----CCHHHHHHHHHHHHHHHcCC-hHHHHHHHHCCCHHHHHH
Confidence 566777 777 6 67777776677777753 25678999999999999754 566778888999999999
Q ss_pred cccccchhhHHHHHHHHHHHhcccc-cchhhhhhhhhHHHHHHHHHHHHHHHhhCCCchhHHHHHHHHHHhcC
Q 037700 201 SMEVGSDLSKQVATFIIYKILLHEE-GLKYCCVLADRFFAVARALAQMTEKLVEQPSPRLLKHIICCYHRLSQ 272 (309)
Q Consensus 201 iME~GSelSKtvAtfIlqKIL~~d~-GL~YiC~t~eRF~aV~~vL~~mv~~l~~~ps~RLLKhIIrCY~RLs~ 272 (309)
.+..+++-.+..|...+..+...+. +...+.. ..++..+ ..+...+++++-++..++-..|+.
T Consensus 188 ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~--------~g~i~~L-~~ll~~~~~~v~~~A~~~L~~l~~ 251 (252)
T 4db8_A 188 LLSSPNEQILQEALWALSNIASGGNEQKQAVKE--------AGALEKL-EQLQSHENEKIQKEAQEALEKLQS 251 (252)
T ss_dssp GGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHHH--------TTHHHHH-HTTTTCSSSHHHHTHHHHHHTTC-
T ss_pred HHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHH--------CCcHHHH-HHHhCCCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999874332 2222111 0123222 334466778887777777666654
No 8
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=95.02 E-value=0.13 Score=41.95 Aligned_cols=130 Identities=12% Similarity=0.061 Sum_probs=95.1
Q ss_pred ccc-ccccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccc
Q 037700 122 CMA-TFRAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLT 200 (309)
Q Consensus 122 cvA-shp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLr 200 (309)
.++ .++ +.+. .+++....-.|..+|+.. .+.+|..++++++.|... +++....+.+...+|..+.
T Consensus 112 ~l~~~~~-----~~~~---~~~~~~~i~~L~~~l~~~-----~~~~~~~a~~~L~~l~~~-~~~~~~~~~~~~~i~~L~~ 177 (252)
T 4hxt_A 112 NIASGPD-----EAIK---AIVDAGGVEVLVKLLTST-----DSEVQKEAARALANIASG-PDEAIKAIVDAGGVEVLVK 177 (252)
T ss_dssp HHTTSCH-----HHHH---HHHHTTHHHHHHHHTTCS-----CHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTHHHHHHH
T ss_pred HHHcCCH-----HHHH---HHHHCCCHHHHHHHHcCC-----CHHHHHHHHHHHHHHHcC-CHHHHHHHHHCcCHHHHHH
Confidence 555 455 7777 778877666677777643 377999999999999875 4556678888999999999
Q ss_pred cccccchhhHHHHHHHHHHHhccccc-chhhhhhhhhHHHHHHHHHHHHHHHhhCCCchhHHHHHHHHHHhcCCh
Q 037700 201 SMEVGSDLSKQVATFIIYKILLHEEG-LKYCCVLADRFFAVARALAQMTEKLVEQPSPRLLKHIICCYHRLSQSP 274 (309)
Q Consensus 201 iME~GSelSKtvAtfIlqKIL~~d~G-L~YiC~t~eRF~aV~~vL~~mv~~l~~~ps~RLLKhIIrCY~RLs~n~ 274 (309)
.++.+++-.+..|...+..+..++.+ .+++.. ..++..++ .+.+.+++++-++..++-..|+.++
T Consensus 178 ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~--------~~~i~~L~-~ll~~~~~~v~~~a~~~L~~l~~~~ 243 (252)
T 4hxt_A 178 LLTSTDSEVQKEAARALANIASGPTSAIKAIVD--------AGGVEVLQ-KLLTSTDSEVQKEAQRALENIKSGG 243 (252)
T ss_dssp HTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHHH--------TTHHHHHH-HGGGCSCHHHHHHHHHHHHHHHHTC
T ss_pred HHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHH--------CCCHHHHH-HHHCCCcHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999998874332 222221 12333333 3456788899999888888877654
No 9
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=94.57 E-value=0.47 Score=44.20 Aligned_cols=147 Identities=12% Similarity=0.012 Sum_probs=92.2
Q ss_pred hhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHH
Q 037700 133 MTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQV 212 (309)
Q Consensus 133 eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtv 212 (309)
+... .++.+++.-.|.-.|... .+.+|-..+++++.+....+++.+.++.+..++|..+..++.+..-.+..
T Consensus 362 ~~~~---~~~~~~~i~~L~~lL~~~-----~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~i~~L~~lL~~~d~~v~~~ 433 (528)
T 4b8j_A 362 DQIQ---AVINAGIIGPLVNLLQTA-----EFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTV 433 (528)
T ss_dssp HHHH---HHHHTTCHHHHHHHHHHS-----CHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHH
T ss_pred HHHH---HHHHCCCHHHHHHHHhcC-----CHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHH
Confidence 5555 677777765666666533 46789999999999999888999999999999999999999999988999
Q ss_pred HHHHHHHHhccccc--------chhhhhhhhhHHHHHHHHHHHHHHHhhCCCchhHHHHHHHHHHhcCChhhHhhhhhcC
Q 037700 213 ATFIIYKILLHEEG--------LKYCCVLADRFFAVARALAQMTEKLVEQPSPRLLKHIICCYHRLSQSPRACDGLRCCL 284 (309)
Q Consensus 213 AtfIlqKIL~~d~G--------L~YiC~t~eRF~aV~~vL~~mv~~l~~~ps~RLLKhIIrCY~RLs~n~rar~aLr~~L 284 (309)
|...+..|+....- .+-.|...+..- .+. .++.+..++++.+-+....+-.++.+...- +.+..++
T Consensus 434 al~~L~~l~~~~~~~~~~~~~~~~~~~~~i~~~~----~~~-~l~~L~~~~~~~v~~~a~~il~~~~~~e~~-~~~~~~~ 507 (528)
T 4b8j_A 434 CLEGLENILKVGETDKTLAAGDVNVFSQMIDEAE----GLE-KIENLQSHDNNEIYEKAVKILEAYWMDEED-DTMGATT 507 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTT----HHH-HHHHGGGCSSHHHHHHHHHHHHHHCC------------
T ss_pred HHHHHHHHHHHHHHhhhcccccccHHHHHHHHCC----cHH-HHHHHHcCCCHHHHHHHHHHHHHHCCCccc-ccccccC
Confidence 99999999865532 222222222221 122 345567889988887776666666554333 3366677
Q ss_pred Cccccchhh
Q 037700 285 PLWFGDRKF 293 (309)
Q Consensus 285 P~~Lrd~~f 293 (309)
|..-..++|
T Consensus 508 ~~~~~~~~~ 516 (528)
T 4b8j_A 508 VAAPQGATF 516 (528)
T ss_dssp ---------
T ss_pred CCcccccee
Confidence 766555666
No 10
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=93.78 E-value=0.78 Score=42.73 Aligned_cols=198 Identities=13% Similarity=0.123 Sum_probs=126.7
Q ss_pred hhHHHHHHHHhcC--cchHHHHHHHHHhccc--ccCchhhHhhhhhchHHHHHHHHHHhhccCCCCCCChhhhhhHHHHH
Q 037700 25 PASVAYWIQALQS--HETKERALLILSQNKE--IRKDLAPLLWNSIGTISALLQEIISVYRTLSSPNLTETASTRVSNAL 100 (309)
Q Consensus 25 ~~~v~q~I~~L~~--~~~Re~AL~eLsk~re--~~~dLap~LW~S~Gtia~LLQEIisvYp~Ls~p~Lt~~~SnRVcnaL 100 (309)
.+.+..++..|.+ ++.|..|+..|.+.-. .-+....++ .-|.+..|++=+- .++ ...-|. .|+
T Consensus 73 ~~~l~~lv~~L~s~~~~~~~~A~~~L~~l~s~~~~~~~~~~~--~~g~v~~Lv~lL~-------~~~---~~~v~~-~A~ 139 (528)
T 4b8j_A 73 LESLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVI--QSGVVPRFVQFLT-------RED---FPQLQF-EAA 139 (528)
T ss_dssp --CHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSSCCHHHHH--HTTCHHHHHHHHT-------CTT---CHHHHH-HHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHH--HCCCHHHHHHHhC-------CCC---CHHHHH-HHH
Confidence 3457777777775 4667788887766422 212222222 3377777776442 111 012232 223
Q ss_pred HhhhhhhcccCchhhhhhhccccccc-ccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhcc
Q 037700 101 ALFQVTFTSIGSSFAILKVYNCMATF-RAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVK 179 (309)
Q Consensus 101 aLlQ~~~~~~~~~~~~~~~~~cvAsh-p~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK 179 (309)
..|. -++++ + +.+. .++.+...-.|..+|+. +.+.+|-..++++|.|..
T Consensus 140 ~~L~-----------------~l~~~~~-----~~~~---~~~~~g~i~~L~~lL~~-----~~~~v~~~a~~aL~~l~~ 189 (528)
T 4b8j_A 140 WALT-----------------NIASGTS-----ENTK---VVIDHGAVPIFVKLLGS-----SSDDVREQAVWALGNVAG 189 (528)
T ss_dssp HHHH-----------------HHHTSCH-----HHHH---HHHHTTHHHHHHHHTTC-----SCHHHHHHHHHHHHHHHH
T ss_pred HHHH-----------------HHhCCCH-----HHHH---HHHhCCcHHHHHHHhcC-----CCHHHHHHHHHHHHHHhC
Confidence 2333 34444 4 7777 77777665556666654 467899999999999985
Q ss_pred CChhHHHHHHhhccccccccccc-cccchhhHHHHHHHHHHHhcccccchhhhhhhhhHHHHHHHHHHHHHHHhhCCCch
Q 037700 180 SDDPEAIRFLLQTEIFPCCLTSM-EVGSDLSKQVATFIIYKILLHEEGLKYCCVLADRFFAVARALAQMTEKLVEQPSPR 258 (309)
Q Consensus 180 ~dd~evI~fLL~tEiiPlCLriM-E~GSelSKtvAtfIlqKIL~~d~GL~YiC~t~eRF~aV~~vL~~mv~~l~~~ps~R 258 (309)
++++.-..+.+...+|.+++.+ +..+.-.+.-|+..+..+..+... .++..+..++..++. +...+++.
T Consensus 190 -~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~--------~~~~~~~~~l~~L~~-lL~~~~~~ 259 (528)
T 4b8j_A 190 -DSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQ--------PSFEQTRPALPALAR-LIHSNDEE 259 (528)
T ss_dssp -TCHHHHHHHHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSC--------CCHHHHTTHHHHHHH-HTTCCCHH
T ss_pred -CChhhHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCC--------CcHHHHHHHHHHHHH-HHCCCCHH
Confidence 4566777888889999999999 566667778888888887665421 223344555555544 34678899
Q ss_pred hHHHHHHHHHHhcCChh
Q 037700 259 LLKHIICCYHRLSQSPR 275 (309)
Q Consensus 259 LLKhIIrCY~RLs~n~r 275 (309)
+.....++...|++++.
T Consensus 260 v~~~a~~aL~~l~~~~~ 276 (528)
T 4b8j_A 260 VLTDACWALSYLSDGTN 276 (528)
T ss_dssp HHHHHHHHHHHHTSSCH
T ss_pred HHHHHHHHHHHHHcCCH
Confidence 99999999999998654
No 11
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=92.01 E-value=0.74 Score=43.14 Aligned_cols=85 Identities=15% Similarity=0.072 Sum_probs=68.9
Q ss_pred hhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChh--HHHHHHhhccccccccccccccchhhH
Q 037700 133 MTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDP--EAIRFLLQTEIFPCCLTSMEVGSDLSK 210 (309)
Q Consensus 133 eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~--evI~fLL~tEiiPlCLriME~GSelSK 210 (309)
+.+. .++.+++.-.|...|+. +...+|-..+.++|.+....++ +.+.++.+..++|..+..++.+..-.+
T Consensus 374 ~~~~---~~~~~~~l~~L~~lL~~-----~~~~v~~~a~~aL~~l~~~~~~~~~~~~~l~~~~~l~~L~~ll~~~~~~v~ 445 (530)
T 1wa5_B 374 EQIQ---AVIDANLIPPLVKLLEV-----AEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRII 445 (530)
T ss_dssp HHHH---HHHHTTCHHHHHHHHHH-----SCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHH
T ss_pred HHHH---HHHHCCCHHHHHHHHhc-----CCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHCCCHHHHHHHHhCCCHHHH
Confidence 5555 67777776666666653 3457899999999999987666 899999999999999999999888888
Q ss_pred HHHHHHHHHHhcccc
Q 037700 211 QVATFIIYKILLHEE 225 (309)
Q Consensus 211 tvAtfIlqKIL~~d~ 225 (309)
..|...+.+++....
T Consensus 446 ~~al~aL~~l~~~~~ 460 (530)
T 1wa5_B 446 EVTLDALENILKMGE 460 (530)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 889999999887654
No 12
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=91.25 E-value=0.61 Score=41.54 Aligned_cols=85 Identities=19% Similarity=0.069 Sum_probs=66.3
Q ss_pred hhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHH
Q 037700 133 MTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQV 212 (309)
Q Consensus 133 eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtv 212 (309)
+.+. .++++++--.|...|+. +...+|....+++|.+....+++.+.++.+..++|..+..++.++.--+..
T Consensus 309 ~~~~---~~~~~~~l~~L~~~l~~-----~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~ 380 (450)
T 2jdq_A 309 AQIQ---TVIDANIFPALISILQT-----AEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQV 380 (450)
T ss_dssp HHHH---HHHHTTHHHHHHHHHHH-----SCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGSSCHHHHHH
T ss_pred HHHH---HHHHCCCHHHHHHHHhc-----CCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHhcCCCHHHHHH
Confidence 5555 66666655455555553 245799999999999998767888999999999999999999988878888
Q ss_pred HHHHHHHHhcccc
Q 037700 213 ATFIIYKILLHEE 225 (309)
Q Consensus 213 AtfIlqKIL~~d~ 225 (309)
|...+..++....
T Consensus 381 a~~aL~~l~~~~~ 393 (450)
T 2jdq_A 381 ALNGLENILRLGE 393 (450)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhch
Confidence 8888888876544
No 13
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=90.82 E-value=2.1 Score=41.58 Aligned_cols=205 Identities=10% Similarity=0.028 Sum_probs=121.8
Q ss_pred HHHHHHHHhc--CcchHHHHHHHHHhcccccCchhhHhhhhhchHHHHHHHHHHhhccCCCCCCChhhhhhHHHHHHhhh
Q 037700 27 SVAYWIQALQ--SHETKERALLILSQNKEIRKDLAPLLWNSIGTISALLQEIISVYRTLSSPNLTETASTRVSNALALFQ 104 (309)
Q Consensus 27 ~v~q~I~~L~--~~~~Re~AL~eLsk~re~~~dLap~LW~S~Gtia~LLQEIisvYp~Ls~p~Lt~~~SnRVcnaLaLlQ 104 (309)
.+..++.-|. +++.|++|+..|.+--+..+. -..+....|.+..|++-+.+- + ....|. +|...|.
T Consensus 15 ~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~~~-~~~i~~~~~~i~~Lv~~L~~~------~----~~~~~~-~A~~~L~ 82 (644)
T 2z6h_A 15 AIPELTKLLNDEDQVVVNKAAVMVHQLSKKEAS-RHAIMRSPQMVSAIVRTMQNT------N----DVETAR-CTAGTLH 82 (644)
T ss_dssp THHHHHHHHTCSCHHHHHHHHHHHHHHHTSTTH-HHHHTTCHHHHHHHHHHHHSC------C----CHHHHH-HHHHHHH
T ss_pred hHHHHHHHHcCCCHHHHHHHHHHHHHHHCCChh-HHHHHhccChHHHHHHHHhcC------C----CHHHHH-HHHHHHH
Confidence 3455555554 456777777666553332221 123445567777777655421 1 111222 3444444
Q ss_pred hhhcccCchhhhhhhcccccccccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhH
Q 037700 105 VTFTSIGSSFAILKVYNCMATFRAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPE 184 (309)
Q Consensus 105 ~~~~~~~~~~~~~~~~~cvAshp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~e 184 (309)
.++.++ +.|. .+.++..---|..+|+. +.+.+|...+++++.|...+ ++
T Consensus 83 -----------------~Ls~~~-----~~~~---~i~~~g~i~~Lv~lL~~-----~~~~v~~~A~~aL~nL~~~~-~~ 131 (644)
T 2z6h_A 83 -----------------NLSHHR-----EGLL---AIFKSGGIPALVKMLGS-----PVDSVLFYAITTLHNLLLHQ-EG 131 (644)
T ss_dssp -----------------HHTTSH-----HHHH---HHHTTTHHHHHHHHTTC-----SSHHHHHHHHHHHHHHHHHS-TT
T ss_pred -----------------HHhcCh-----hhHH---HHHHcCCHHHHHHHHhC-----CCHHHHHHHHHHHHHHHhCc-ch
Confidence 455566 6666 66665544444455543 34789999999999998764 34
Q ss_pred HHHHHhhccccccccccccccchhhHHHHHHHHHHHhc-ccccchhhhhhhhhHHHHHHHHHHHHHHHhhCCCchhHHHH
Q 037700 185 AIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKILL-HEEGLKYCCVLADRFFAVARALAQMTEKLVEQPSPRLLKHI 263 (309)
Q Consensus 185 vI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL~-~d~GL~YiC~t~eRF~aV~~vL~~mv~~l~~~ps~RLLKhI 263 (309)
....+.+...+|..++.+..++.--+..|...+..+-. ++++-.-++.. ..+..++.-+.......+....
T Consensus 132 ~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~~i~~~--------g~v~~Lv~lL~~~~~~~~~~~a 203 (644)
T 2z6h_A 132 AKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILAS--------GGPQALVNIMRTYTYEKLLWTT 203 (644)
T ss_dssp HHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHT--------THHHHHHHHHTTCCCHHHHHHH
T ss_pred hHHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHHHHHHHc--------CChHHHHHHHHcCChHHHHHHH
Confidence 55667788899999999999887666666667777664 33322222111 2233444434344456677788
Q ss_pred HHHHHHhcCChhhHhhhhh
Q 037700 264 ICCYHRLSQSPRACDGLRC 282 (309)
Q Consensus 264 IrCY~RLs~n~rar~aLr~ 282 (309)
.++-..|+.++..|+.+.+
T Consensus 204 ~~~L~nLs~~~~~~~~l~~ 222 (644)
T 2z6h_A 204 SRVLKVLSVCSSNKPAIVE 222 (644)
T ss_dssp HHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHhcCcccHHHHHH
Confidence 8888888888887776654
No 14
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=89.04 E-value=1.3 Score=39.34 Aligned_cols=118 Identities=13% Similarity=0.257 Sum_probs=77.9
Q ss_pred HHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHH
Q 037700 140 LMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYK 219 (309)
Q Consensus 140 ~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqK 219 (309)
.++++++.-.|..+|+. +.+.+|-..++++|.+... +++.+.-+.+..++|..++.++.++.-.|..|.+.+..
T Consensus 271 ~~~~~~~l~~L~~ll~~-----~~~~vr~~a~~~L~~l~~~-~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~ 344 (450)
T 2jdq_A 271 VILNCSALQSLLHLLSS-----PKESIKKEACWTISNITAG-NRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITN 344 (450)
T ss_dssp HHHTTTHHHHHHHHTTC-----SSHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHCccHHHHHHHHcC-----CCHHHHHHHHHHHHHHHcC-CHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 55666655566666654 3478999999999999874 45566677788999999999999988888999999998
Q ss_pred Hhcc--cccchhhhhhhhhHHHHHHHHHHHHHHHhhCCCchhHHHHHHHHHHhcC
Q 037700 220 ILLH--EEGLKYCCVLADRFFAVARALAQMTEKLVEQPSPRLLKHIICCYHRLSQ 272 (309)
Q Consensus 220 IL~~--d~GL~YiC~t~eRF~aV~~vL~~mv~~l~~~ps~RLLKhIIrCY~RLs~ 272 (309)
+..+ .+..+++.. ..++..++. +.+.+++++.++++.+-..+..
T Consensus 345 l~~~~~~~~~~~l~~--------~~~i~~L~~-ll~~~~~~v~~~a~~aL~~l~~ 390 (450)
T 2jdq_A 345 ATSGGSAEQIKYLVE--------LGCIKPLCD-LLTVMDSKIVQVALNGLENILR 390 (450)
T ss_dssp HHHHCCHHHHHHHHH--------HTCHHHHHH-GGGSSCHHHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHH--------CCCHHHHHH-HhcCCCHHHHHHHHHHHHHHHH
Confidence 8764 233333221 112222222 2334566666666655555544
No 15
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=86.18 E-value=15 Score=33.46 Aligned_cols=154 Identities=10% Similarity=0.052 Sum_probs=93.4
Q ss_pred hHHHHHHHHhc--CcchHHHHHHHHHhcccccCchhhHhhhhhchHHHHHHHHHHhhccCCCCCCChhhhhhHHHHHHhh
Q 037700 26 ASVAYWIQALQ--SHETKERALLILSQNKEIRKDLAPLLWNSIGTISALLQEIISVYRTLSSPNLTETASTRVSNALALF 103 (309)
Q Consensus 26 ~~v~q~I~~L~--~~~~Re~AL~eLsk~re~~~dLap~LW~S~Gtia~LLQEIisvYp~Ls~p~Lt~~~SnRVcnaLaLl 103 (309)
..+..++.-|. +++.|++|...|.+--..- +-...+....|.+..|++-+.+- + ....|. ++...|
T Consensus 17 ~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~-~~~~~~~~~~~~i~~Lv~~L~~~------~----~~~~~~-~a~~~L 84 (529)
T 1jdh_A 17 RAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-ASRHAIMRSPQMVSAIVRTMQNT------N----DVETAR-CTAGTL 84 (529)
T ss_dssp CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSH-HHHHHHHTCHHHHHHHHHHHHHC------C----CHHHHH-HHHHHH
T ss_pred hhHHHHHHHhCCCCHHHHHHHHHHHHHHHcCC-ccHHHHHhCcchHHHHHHHHhcC------C----CHHHHH-HHHHHH
Confidence 34555565554 4466777666554422111 11123445567777776655421 1 111222 333334
Q ss_pred hhhhcccCchhhhhhhcccccccccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChh
Q 037700 104 QVTFTSIGSSFAILKVYNCMATFRAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDP 183 (309)
Q Consensus 104 Q~~~~~~~~~~~~~~~~~cvAshp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~ 183 (309)
. .++.++ +.|. .+.++..--.|..+|+. +.+.+|...+++++.+...++
T Consensus 85 ~-----------------~ls~~~-----~~~~---~i~~~g~i~~L~~lL~~-----~~~~v~~~a~~~L~~l~~~~~- 133 (529)
T 1jdh_A 85 H-----------------NLSHHR-----EGLL---AIFKSGGIPALVKMLGS-----PVDSVLFYAITTLHNLLLHQE- 133 (529)
T ss_dssp H-----------------HHTTSH-----HHHH---HHHHTTHHHHHHHHTTC-----SCHHHHHHHHHHHHHHHHHCT-
T ss_pred H-----------------HHHcCc-----hhHH---HHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHhcCCc-
Confidence 4 455666 7777 77776655555566654 236789999999999987533
Q ss_pred HHHHHHhhccccccccccccccchhhHHHHHHHHHHHhc
Q 037700 184 EAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKILL 222 (309)
Q Consensus 184 evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL~ 222 (309)
+....+.+...+|..++.+..++.-.+..|...+..+-.
T Consensus 134 ~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~ 172 (529)
T 1jdh_A 134 GAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAY 172 (529)
T ss_dssp THHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHh
Confidence 345566778899999999999887777777777776654
No 16
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=86.04 E-value=3.6 Score=38.66 Aligned_cols=133 Identities=13% Similarity=0.150 Sum_probs=96.0
Q ss_pred hhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhcccccccccccc-ccchhhHH
Q 037700 133 MTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSME-VGSDLSKQ 211 (309)
Q Consensus 133 eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME-~GSelSKt 211 (309)
+.|. .+.++...-.|-.+|+. +.+.++....+.++-|... +++.-..+.+...||..++.+. .|+.-.|-
T Consensus 35 ~~~~---~i~~~g~i~~Lv~lL~s-----~~~~~~~~A~~aL~nLa~~-~~~~k~~i~~~G~i~~Lv~lL~~~~~~~~~~ 105 (457)
T 1xm9_A 35 SAKQ---QVYQLGGICKLVDLLRS-----PNQNVQQAAAGALRNLVFR-STTNKLETRRQNGIREAVSLLRRTGNAEIQK 105 (457)
T ss_dssp SHHH---HHHHTTHHHHHHHHTTS-----SCHHHHHHHHHHHHHHHSS-CHHHHHHHHHTTCHHHHHHHHTTCCCHHHHH
T ss_pred HHHH---HHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHhcC-CHHHHHHHHHcCCHHHHHHHHhhCCCHHHHH
Confidence 5676 66677765556666762 4567888899999998883 4666677788999999999999 88888888
Q ss_pred HHHHHHHHHhcccccchhhhhhhhhHHHHHHHHHHHHHHHh---------------hCCCchhHHHHHHHHHHhcCChhh
Q 037700 212 VATFIIYKILLHEEGLKYCCVLADRFFAVARALAQMTEKLV---------------EQPSPRLLKHIICCYHRLSQSPRA 276 (309)
Q Consensus 212 vAtfIlqKIL~~d~GL~YiC~t~eRF~aV~~vL~~mv~~l~---------------~~ps~RLLKhIIrCY~RLs~n~ra 276 (309)
-|+..+..+-.++..-..+. + .++..++.-+. +..++.++++..++-..||.+|..
T Consensus 106 ~a~~aL~nLa~~~~~~~~i~----~-----g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~~aL~nLs~~~~~ 176 (457)
T 1xm9_A 106 QLTGLLWNLSSTDELKEELI----A-----DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAG 176 (457)
T ss_dssp HHHHHHHHHHTSSSTHHHHH----H-----HHHHHHHHHTTHHHHTCC---------CCCHHHHHHHHHHHHHHTTSHHH
T ss_pred HHHHHHHHHhcCHHhHHHHH----h-----ccHHHHHHHHhccccccccCccchhcccccHHHHHHHHHHHHHHccCHHH
Confidence 89999999887755433332 1 22223333221 114678999999999999999998
Q ss_pred Hhhhhhc
Q 037700 277 CDGLRCC 283 (309)
Q Consensus 277 r~aLr~~ 283 (309)
|+.++++
T Consensus 177 ~~~i~~~ 183 (457)
T 1xm9_A 177 RQTMRNY 183 (457)
T ss_dssp HHHHTTS
T ss_pred HHHHHHc
Confidence 8888754
No 17
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=83.75 E-value=2.5 Score=39.54 Aligned_cols=82 Identities=16% Similarity=0.211 Sum_probs=64.9
Q ss_pred hhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHH
Q 037700 133 MTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQV 212 (309)
Q Consensus 133 eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtv 212 (309)
+... .++++++.-.|..+|+.. ...+|-..++.+|.+... +++.+..+++..++|..++.++.++.-.|..
T Consensus 332 ~~~~---~~~~~~~l~~L~~lL~~~-----~~~vr~~A~~aL~~l~~~-~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~ 402 (530)
T 1wa5_B 332 LQTQ---VVINAGVLPALRLLLSSP-----KENIKKEACWTISNITAG-NTEQIQAVIDANLIPPLVKLLEVAEYKTKKE 402 (530)
T ss_dssp HHHH---HHHHTTHHHHHHHHTTCS-----CHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTCHHHHHHHHHHSCHHHHHH
T ss_pred HHHH---HHHHcchHHHHHHHHcCC-----CHHHHHHHHHHHHHHHcC-CHHHHHHHHHCCCHHHHHHHHhcCCHHHHHH
Confidence 4444 666666666667777643 467899999999999874 4567777888899999999999999888999
Q ss_pred HHHHHHHHhcc
Q 037700 213 ATFIIYKILLH 223 (309)
Q Consensus 213 AtfIlqKIL~~ 223 (309)
|...+..+..+
T Consensus 403 a~~aL~~l~~~ 413 (530)
T 1wa5_B 403 ACWAISNASSG 413 (530)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999888764
No 18
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=82.23 E-value=18 Score=34.98 Aligned_cols=101 Identities=12% Similarity=0.103 Sum_probs=74.0
Q ss_pred CcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHHHhcccccchhhhhhhhhHHHHHH
Q 037700 163 HEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKILLHEEGLKYCCVLADRFFAVAR 242 (309)
Q Consensus 163 ~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL~~d~GL~YiC~t~eRF~aV~~ 242 (309)
.|.++...++.++.|.+. ++.-..+.+...+|...+.+..+++--+..|...+.++..+.++ |...+. ..
T Consensus 429 ~~~v~~~a~~aL~~La~~--~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~----~~~i~~----~g 498 (644)
T 2z6h_A 429 MEEIVEGCTGALHILARD--VHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEA----AEAIEA----EG 498 (644)
T ss_dssp HHHHHHHHHHHHHHHTTS--HHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSHHH----HHHHHH----TT
T ss_pred HHHHHHHHHHHHHHHhcC--HHHHHHHHhCCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCHHH----HHHHHH----cC
Confidence 577888899999999974 45556677888999999999999998899999999987765433 211111 11
Q ss_pred HHHHHHHHHhhCCCchhHHHHHHHHHHhcCCh
Q 037700 243 ALAQMTEKLVEQPSPRLLKHIICCYHRLSQSP 274 (309)
Q Consensus 243 vL~~mv~~l~~~ps~RLLKhIIrCY~RLs~n~ 274 (309)
.+. .+..+...+++.+-+....+-.+|+++.
T Consensus 499 ~l~-~L~~ll~~~~~~vr~~A~~aL~~l~~~~ 529 (644)
T 2z6h_A 499 ATA-PLTELLHSRNEGVATYAAAVLFRMSEDK 529 (644)
T ss_dssp CHH-HHHHHTTCSCHHHHHHHHHHHHHHTTTS
T ss_pred Chh-HHHHHHcCCCHHHHHHHHHHHHHHhccC
Confidence 122 3445567888888888888888888865
No 19
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=80.16 E-value=9.6 Score=34.57 Aligned_cols=82 Identities=10% Similarity=0.015 Sum_probs=67.7
Q ss_pred hhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHH
Q 037700 133 MTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQV 212 (309)
Q Consensus 133 eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtv 212 (309)
+-.. .|+.+..--.|-..|+. +-..+|--+...++.|... +++.+..+.+..++|.....+..++.-.+..
T Consensus 158 ~~~~---~~~~~ggi~~L~~lL~~-----~d~~v~~~A~~aLs~L~~~-~~~~~~~vv~~g~i~~Lv~LL~~~d~~v~~~ 228 (296)
T 1xqr_A 158 AGLL---QFLRLDGFSVLMRAMQQ-----QVQKLKVKSAFLLQNLLVG-HPEHKGTLCSMGMVQQLVALVRTEHSPFHEH 228 (296)
T ss_dssp HHHH---HHHHTTHHHHHHHHHHS-----SCHHHHHHHHHHHHHHHHH-CGGGHHHHHHTTHHHHHHHHHTSCCSTHHHH
T ss_pred HHHH---HHHHCCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHHhC-ChHHHHHHHHcCCHHHHHHHHcCCChhHHHH
Confidence 5555 78887755566666653 3567888899999999986 7889999999999999999999999999999
Q ss_pred HHHHHHHHhcc
Q 037700 213 ATFIIYKILLH 223 (309)
Q Consensus 213 AtfIlqKIL~~ 223 (309)
|...+..|+.+
T Consensus 229 al~aL~~l~~~ 239 (296)
T 1xqr_A 229 VLGALCSLVTD 239 (296)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhC
Confidence 99999999877
No 20
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=79.90 E-value=4.1 Score=37.87 Aligned_cols=158 Identities=11% Similarity=0.061 Sum_probs=111.0
Q ss_pred ChhhhhhHHHHHHhhhhhhcccCchhhhhhhcccccccccccchhhHHHHHHHHHhcCccccccccccc------cCCCC
Q 037700 89 TETASTRVSNALALFQVTFTSIGSSFAILKVYNCMATFRAIKSSMTRLISVLMVLAKLPLYLYPFLNTK------DKEKP 162 (309)
Q Consensus 89 t~~~SnRVcnaLaLlQ~~~~~~~~~~~~~~~~~cvAshp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt------~k~rp 162 (309)
...--..+|.|+..|+ =++.++ |.|. .+++....-.|-.+|... .....
T Consensus 42 ~~~~~~~~~~A~~aL~-----------------nls~d~-----e~R~---~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~ 96 (354)
T 3nmw_A 42 PAPVEHQICPAVCVLM-----------------KLSFDE-----EHRH---AMNELGGLQAIAELLQVDCEMYGLTNDHY 96 (354)
T ss_dssp CCGGGGTHHHHHHHHH-----------------HHHTSH-----HHHH---HHHHTTHHHHHHHHHHHHHHHHTTSCCHH
T ss_pred CCcchHHHHHHHHHHH-----------------HHcCCH-----HHHH---HHHHcCCHHHHHHHHhcccccccccCCCC
Confidence 3444578899999999 778888 9999 889988888888887532 11112
Q ss_pred CcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHHHhcc-cccchhhhhhhhhHHHH-
Q 037700 163 HEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKILLH-EEGLKYCCVLADRFFAV- 240 (309)
Q Consensus 163 ~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL~~-d~GL~YiC~t~eRF~aV- 240 (309)
...+|-....++.-|.+.+++.-..+.-....||..++.+..+++-.+..|...+..+-.. +.. --.+|
T Consensus 97 ~~~~q~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~---------~k~~i~ 167 (354)
T 3nmw_A 97 SITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVN---------SKKTLR 167 (354)
T ss_dssp HHHHHHHHHHHHHHHTSSCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHH---------HHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHH---------HHHHHH
Confidence 3457778888889888766543222223456799999999999999999999988887542 111 11122
Q ss_pred -HHHHHHHHHHHhhCCCchhHHHHHHHHHHhcC-ChhhHhhh
Q 037700 241 -ARALAQMTEKLVEQPSPRLLKHIICCYHRLSQ-SPRACDGL 280 (309)
Q Consensus 241 -~~vL~~mv~~l~~~ps~RLLKhIIrCY~RLs~-n~rar~aL 280 (309)
+.++..+|.-|.+.+++...+...++-..||. ++..+..+
T Consensus 168 ~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i 209 (354)
T 3nmw_A 168 EVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADI 209 (354)
T ss_dssp HTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhHHH
Confidence 23566666666677888999999999999998 65555444
No 21
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=79.05 E-value=21 Score=32.51 Aligned_cols=85 Identities=9% Similarity=0.010 Sum_probs=58.1
Q ss_pred hhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccC--ChhHHHHHHhhccccccccccccccch-hh
Q 037700 133 MTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKS--DDPEAIRFLLQTEIFPCCLTSMEVGSD-LS 209 (309)
Q Consensus 133 eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~--dd~evI~fLL~tEiiPlCLriME~GSe-lS 209 (309)
+.+. .++++...--|...|...+ ..+.+|...++++|.|... ++++....+.....+|...+.+..+++ --
T Consensus 299 ~~~~---~~~~~~~v~~L~~ll~~~~---~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~~L~~lL~~~~~~~v 372 (529)
T 1jdh_A 299 KNKM---MVCQVGGIEALVRTVLRAG---DREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPL 372 (529)
T ss_dssp HHHH---HHHHTTHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHH
T ss_pred HHHH---HHHHcCChHHHHHHHHccC---CHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHcCChhHHHHHhccccchHH
Confidence 5666 6666664444455554321 2257899999999999874 334456677888899999999998874 55
Q ss_pred HHHHHHHHHHHhcc
Q 037700 210 KQVATFIIYKILLH 223 (309)
Q Consensus 210 KtvAtfIlqKIL~~ 223 (309)
+..|...+..+..+
T Consensus 373 ~~~a~~~l~nl~~~ 386 (529)
T 1jdh_A 373 IKATVGLIRNLALC 386 (529)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhcC
Confidence 55666777776654
No 22
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=78.86 E-value=22 Score=33.57 Aligned_cols=81 Identities=9% Similarity=0.110 Sum_probs=63.9
Q ss_pred hhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHH
Q 037700 133 MTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQV 212 (309)
Q Consensus 133 eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtv 212 (309)
+.+. .++++...-.|..+|+. +.+.+|-...++++-+... +++-+..+.+..++|.+++.++.|+.-.|.-
T Consensus 307 ~~~~---~i~~~g~l~~L~~LL~~-----~~~~v~~~A~~aL~nl~a~-~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~ 377 (510)
T 3ul1_B 307 EQTQ---KVIDAGALAVFPSLLTN-----PKTNIQKEATWTMSNITAG-RQDQIQQVVNHGLVPFLVGVLSKADFKTQKE 377 (510)
T ss_dssp HHHH---HHHHTTGGGGCC-CTTC-----SSHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTHHHHHHHHHHSSCHHHHHH
T ss_pred HHHH---HHhhccchHHHHHHhcC-----CCHHHHHHHHHHHHHHHcC-cHHHHHHHHhcCCHHHHHHHHcCCCHHHHHH
Confidence 4455 67778777777777753 3467888899999988764 5667888889999999999999999999999
Q ss_pred HHHHHHHHhc
Q 037700 213 ATFIIYKILL 222 (309)
Q Consensus 213 AtfIlqKIL~ 222 (309)
|...+..+..
T Consensus 378 Aa~aL~Nl~~ 387 (510)
T 3ul1_B 378 AAWAITNYTS 387 (510)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9998887655
No 23
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=77.27 E-value=15 Score=34.71 Aligned_cols=81 Identities=9% Similarity=0.119 Sum_probs=65.0
Q ss_pred hhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHH
Q 037700 133 MTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQV 212 (309)
Q Consensus 133 eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtv 212 (309)
+.+. .++++...-.|..+|+. +.+.+|-...++++-+... +++.+..+.+..++|..+..+..|+.-.|.-
T Consensus 326 ~~~~---~i~~~g~l~~L~~LL~~-----~~~~i~~~a~~aL~nl~~~-~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~ 396 (529)
T 3tpo_A 326 EQTQ---KVIDAGALAVFPSLLTN-----PKTNIQKEATWTMSNITAG-RQDQIQQVVNHGLVPFLVGVLSKADFKTQKA 396 (529)
T ss_dssp HHHH---HHHHTTGGGGHHHHTTC-----SSHHHHHHHHHHHHHHHTS-CHHHHHHHHHTTHHHHHHHHHHSSCHHHHHH
T ss_pred HHHH---HHhhcccHHHHHHHHcC-----CCHHHHHHHHHHHHHHhcc-cHHHHHHHHhcCcHHHHHHHhcCCCHHHHHH
Confidence 5555 67788877777777763 3457888888898888764 5677888889999999999999999999999
Q ss_pred HHHHHHHHhc
Q 037700 213 ATFIIYKILL 222 (309)
Q Consensus 213 AtfIlqKIL~ 222 (309)
|...|..+..
T Consensus 397 A~~aL~nl~~ 406 (529)
T 3tpo_A 397 AAWAITNYTS 406 (529)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9988887764
No 24
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=70.61 E-value=9.8 Score=36.88 Aligned_cols=143 Identities=11% Similarity=0.048 Sum_probs=96.6
Q ss_pred cccccccccchhhHHHHHHHHHhcCccccccccccc------cCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhcccc
Q 037700 122 CMATFRAIKSSMTRLISVLMVLAKLPLYLYPFLNTK------DKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIF 195 (309)
Q Consensus 122 cvAshp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt------~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEii 195 (309)
=++.++ +.|. .++++..--.|-.+|... ........++-....++.-|...+++.-..+.-....|
T Consensus 174 nls~~~-----e~R~---~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaI 245 (458)
T 3nmz_A 174 KLSFDE-----EHRH---AMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCM 245 (458)
T ss_dssp HHTTSH-----HHHH---HHHHTTHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHH
T ss_pred HhcCCH-----HHHH---HHHHCCCHHHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHHHhCCCcccHHHHHHcCCcH
Confidence 457777 9999 999988877787777421 01112344677778888888876654322222245679
Q ss_pred ccccccccccchhhHHHHHHHHHHHhcccccchhhhhhhhhHHHHH--HHHHHHHHHHhhCCCchhHHHHHHHHHHhcC-
Q 037700 196 PCCLTSMEVGSDLSKQVATFIIYKILLHEEGLKYCCVLADRFFAVA--RALAQMTEKLVEQPSPRLLKHIICCYHRLSQ- 272 (309)
Q Consensus 196 PlCLriME~GSelSKtvAtfIlqKIL~~d~GL~YiC~t~eRF~aV~--~vL~~mv~~l~~~ps~RLLKhIIrCY~RLs~- 272 (309)
|...+.+..+++-.+..|...+..+-..++ .+.-.+|. .++..+|.-|...+++.+.+...++-..||.
T Consensus 246 p~LV~LL~s~~~~v~~~A~~aL~nLs~~~~--------~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~ 317 (458)
T 3nmz_A 246 RALVAQLKSESEDLQQVIASVLRNLSWRAD--------VNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAH 317 (458)
T ss_dssp HHHHHGGGCSCHHHHHHHHHHHHHHTSSCC--------HHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhcCCC--------HHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccC
Confidence 999999999999999999988887643210 11112222 3566677666677788999999999888887
Q ss_pred ChhhHhhh
Q 037700 273 SPRACDGL 280 (309)
Q Consensus 273 n~rar~aL 280 (309)
++..+..+
T Consensus 318 ~~~nk~~I 325 (458)
T 3nmz_A 318 CTENKADI 325 (458)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 65555444
No 25
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=67.58 E-value=15 Score=34.09 Aligned_cols=82 Identities=9% Similarity=0.056 Sum_probs=66.4
Q ss_pred hhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHH
Q 037700 133 MTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQV 212 (309)
Q Consensus 133 eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtv 212 (309)
+.|. .++++...-.|--.|... -+.++--..++++.|.. .+++-...+.+...||.....++.|++-.|..
T Consensus 254 ~~~~---~i~~~g~i~~Lv~lL~~~-----~~~v~~~A~~aL~nLa~-~~~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~~ 324 (354)
T 3nmw_A 254 DHRQ---ILRENNCLQTLLQHLKSH-----SLTIVSNACGTLWNLSA-RNPKDQEALWDMGAVSMLKNLIHSKHKMIAMG 324 (354)
T ss_dssp HHHH---HHHTTTHHHHHHHHTTCS-----CHHHHHHHHHHHHHHTS-SCHHHHHHHHHTTHHHHHHTTTTCSSHHHHHH
T ss_pred HHHH---HHHHcCCHHHHHHHHcCC-----ChHHHHHHHHHHHHHhC-CCHHHHHHHHHCCCHHHHHHHHhCCCHHHHHH
Confidence 8888 888887655566666532 23477788889998875 36777888999999999999999999999999
Q ss_pred HHHHHHHHhcc
Q 037700 213 ATFIIYKILLH 223 (309)
Q Consensus 213 AtfIlqKIL~~ 223 (309)
|...+..+..+
T Consensus 325 A~~aL~nL~~~ 335 (354)
T 3nmw_A 325 SAAALRNLMAN 335 (354)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999998876
No 26
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=67.55 E-value=36 Score=31.11 Aligned_cols=67 Identities=7% Similarity=0.045 Sum_probs=43.0
Q ss_pred ccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHHHh
Q 037700 149 YLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKIL 221 (309)
Q Consensus 149 YLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL 221 (309)
++.|++..-.++. ....|.++.+++|.+...-.++. ..+++|.+...++..+.--+..|...+.++.
T Consensus 126 ~l~~~l~~l~~~~-~~~~R~~a~~~l~~~~~~~~~~~-----~~~l~~~l~~l~~d~~~~VR~~a~~~l~~l~ 192 (588)
T 1b3u_A 126 HFVPLVKRLAGGD-WFTSRTSACGLFSVCYPRVSSAV-----KAELRQYFRNLCSDDTPMVRRAAASKLGEFA 192 (588)
T ss_dssp THHHHHHHHHTCS-SHHHHHHHGGGHHHHTTTSCHHH-----HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC-CcHHHHHHHHHHHHHHHhcCHHH-----HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 5677775443333 55789999999999886444332 3456777766666666666666666666554
No 27
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=67.22 E-value=52 Score=31.06 Aligned_cols=78 Identities=15% Similarity=0.169 Sum_probs=62.4
Q ss_pred HHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHH
Q 037700 140 LMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYK 219 (309)
Q Consensus 140 ~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqK 219 (309)
.++.+.+.-.|..+|.. +.+.++...+..+|.++..++ +....+++...+|.....+..+++-.|.-|..++..
T Consensus 288 ~v~~~g~i~~Lv~lL~~-----~~~~v~~~a~~aL~nl~~~~~-~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~n 361 (529)
T 3tpo_A 288 MVVKKGVVPQLVKLLGA-----TELPIVTPALRAIGNIVTGTD-EQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSN 361 (529)
T ss_dssp HHHTTTCHHHHHHHHTC-----SCHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHH
T ss_pred HHHhccchHHHHHHhcC-----CChhHHHHHHHHHHHHHccch-HHHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 56677777777777764 346788899999999997654 456677888999999999999999889999999988
Q ss_pred Hhcc
Q 037700 220 ILLH 223 (309)
Q Consensus 220 IL~~ 223 (309)
|-.+
T Consensus 362 l~~~ 365 (529)
T 3tpo_A 362 ITAG 365 (529)
T ss_dssp HHTS
T ss_pred Hhcc
Confidence 8654
No 28
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=66.41 E-value=57 Score=30.78 Aligned_cols=78 Identities=15% Similarity=0.169 Sum_probs=61.3
Q ss_pred HHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHH
Q 037700 140 LMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYK 219 (309)
Q Consensus 140 ~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqK 219 (309)
.++.+.+.-.|..+|... .+.++...+..+|.++..++ +....+++...+|...+.+..+++--|.-|..++..
T Consensus 269 ~i~~~g~i~~Lv~lL~~~-----~~~v~~~al~aL~nl~~~~~-~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~aL~n 342 (510)
T 3ul1_B 269 MVVKKGVVPQLVKLLGAT-----ELPIVTPALRAIGNIVTGTD-EQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSN 342 (510)
T ss_dssp HHHTTTCHHHHHHHHTCS-----CHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHHHHH
T ss_pred HHHhcccchhhhhhhcCC-----ChhhhhHHHHHHHHhhcCCH-HHHHHHhhccchHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 556777777777777643 45688899999999987654 456777888999999999999999999999999998
Q ss_pred Hhcc
Q 037700 220 ILLH 223 (309)
Q Consensus 220 IL~~ 223 (309)
|..+
T Consensus 343 l~a~ 346 (510)
T 3ul1_B 343 ITAG 346 (510)
T ss_dssp HTTS
T ss_pred HHcC
Confidence 8654
No 29
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=66.20 E-value=71 Score=32.26 Aligned_cols=101 Identities=13% Similarity=0.103 Sum_probs=71.7
Q ss_pred CcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHHHhcccccchhhhhhhhhHHHHHH
Q 037700 163 HEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKILLHEEGLKYCCVLADRFFAVAR 242 (309)
Q Consensus 163 ~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL~~d~GL~YiC~t~eRF~aV~~ 242 (309)
.|.+|...+|.++.|.. +++....+.+...+|.....+..+++-.+..|...+..+..+.++-..+.+ ..
T Consensus 565 ~~~v~~~a~~aL~~La~--~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~i~~--------~g 634 (780)
T 2z6g_A 565 MEEIVEACTGALHILAR--DIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEA--------EG 634 (780)
T ss_dssp HHHHHHHHHHHHHHHTT--SHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHHTSHHHHHHHHH--------TT
T ss_pred hHHHHHHHHHHHHHHhc--ChhhHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCHHHHHHHHH--------CC
Confidence 46688889999999886 455556677888999999999999999999999998888655432111111 01
Q ss_pred HHHHHHHHHhhCCCchhHHHHHHHHHHhcCCh
Q 037700 243 ALAQMTEKLVEQPSPRLLKHIICCYHRLSQSP 274 (309)
Q Consensus 243 vL~~mv~~l~~~ps~RLLKhIIrCY~RLs~n~ 274 (309)
++. .+..+.+.+++.+-+....+-.++++++
T Consensus 635 ~i~-~L~~Ll~~~~~~Vr~~A~~aL~~l~~~~ 665 (780)
T 2z6g_A 635 ATA-PLTELLHSRNEGVATYAAAVLFRMSEDK 665 (780)
T ss_dssp CHH-HHHHGGGCSCHHHHHHHHHHHHHHHTTS
T ss_pred CHH-HHHHHHcCCCHHHHHHHHHHHHHHHcCC
Confidence 122 2234567788888888888888888766
No 30
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=56.60 E-value=32 Score=34.21 Aligned_cols=58 Identities=9% Similarity=0.131 Sum_probs=43.4
Q ss_pred CcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHHH
Q 037700 163 HEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKI 220 (309)
Q Consensus 163 ~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKI 220 (309)
-..+|.+++..||++++.-++++..|+-+..++|+++..++..+.--+..|...+..+
T Consensus 599 d~~~~~~~l~~l~~l~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l 656 (852)
T 4fdd_A 599 DKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDL 656 (852)
T ss_dssp CTHHHHHHHHHHHHHHHHHGGGGHHHHHTCCHHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhHhHHHHhcCCcHHHHHHHHhCCCChhHHHHHHHHHHHH
Confidence 4458999999999999877788888887889999999988765443444444444443
No 31
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=55.30 E-value=23 Score=34.25 Aligned_cols=87 Identities=10% Similarity=0.086 Sum_probs=68.8
Q ss_pred hhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHH
Q 037700 133 MTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQV 212 (309)
Q Consensus 133 eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtv 212 (309)
+.|. .++++...-.|--.|... -+..+--..++++.|.. .+++....+.+...||.....++.|++-.|..
T Consensus 370 ~~~~---~i~~~G~i~~Lv~LL~~~-----~~~v~~~A~~aL~nLa~-~~~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~~ 440 (458)
T 3nmz_A 370 DHRQ---ILRENNCLQTLLQHLKSH-----SLTIVSNACGTLWNLSA-RNPKDQEALWDMGAVSMLKNLIHSKHKMIAMG 440 (458)
T ss_dssp HHHH---HHHHTTHHHHHHHHSSCS-----CHHHHHHHHHHHHHHHS-SCHHHHHHHHHHTHHHHHHTTTTCSSHHHHHH
T ss_pred HHHH---HHHHcccHHHHHHHHcCC-----ChHHHHHHHHHHHHHHc-CCHHHHHHHHHCCCHHHHHHHHhCCCHHHHHH
Confidence 8888 788877655555556532 23478888999999875 36778899999999999999999999999999
Q ss_pred HHHHHHHHhcccccchh
Q 037700 213 ATFIIYKILLHEEGLKY 229 (309)
Q Consensus 213 AtfIlqKIL~~d~GL~Y 229 (309)
|...+..|+.+. -.+|
T Consensus 441 Aa~AL~nL~~~~-p~ky 456 (458)
T 3nmz_A 441 SAAALRNLMANR-PAKY 456 (458)
T ss_dssp HHHHHHHHHTCC-SCC-
T ss_pred HHHHHHHHHcCC-Hhhh
Confidence 999999998764 5554
No 32
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=52.70 E-value=25 Score=32.87 Aligned_cols=109 Identities=11% Similarity=0.019 Sum_probs=78.6
Q ss_pred CcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHHHhcc-cccchhhhhhhhhHHHHH
Q 037700 163 HEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKILLH-EEGLKYCCVLADRFFAVA 241 (309)
Q Consensus 163 ~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL~~-d~GL~YiC~t~eRF~aV~ 241 (309)
.+.++......++-|.+.+ ++.-.-+.+...||...+.+..+++-.+..|+..+..|..+ ++.-..+ .=+
T Consensus 15 ~~~~q~~A~~~L~~l~~~~-~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i--------~~~ 85 (457)
T 1xm9_A 15 DEKYQAIGAYYIQHTCFQD-ESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET--------RRQ 85 (457)
T ss_dssp CTHHHHHHHHHHHHHTSSC-SSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH--------HHT
T ss_pred CHHHHHHHHHHHHHHHcCC-hHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH--------HHc
Confidence 3457788888888888643 33333556788999999999999999999999999998875 2211111 112
Q ss_pred HHHHHHHHHHhhCCCchhHHHHHHHHHHhcCChhhHhhh
Q 037700 242 RALAQMTEKLVEQPSPRLLKHIICCYHRLSQSPRACDGL 280 (309)
Q Consensus 242 ~vL~~mv~~l~~~ps~RLLKhIIrCY~RLs~n~rar~aL 280 (309)
.++..+|.-|.+.+++.+.++...+-..|+.++..|+.+
T Consensus 86 G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i 124 (457)
T 1xm9_A 86 NGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEEL 124 (457)
T ss_dssp TCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHH
T ss_pred CCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHHH
Confidence 345556655555788999999999999999887777644
No 33
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=49.73 E-value=40 Score=29.83 Aligned_cols=133 Identities=16% Similarity=0.195 Sum_probs=88.3
Q ss_pred hhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhcccccccccccc-ccchhhHH
Q 037700 133 MTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSME-VGSDLSKQ 211 (309)
Q Consensus 133 eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME-~GSelSKt 211 (309)
+.|. ...++.-.-.|--+|.. +.+.++-...|.++-|.+. ++|--..+.+..-||..++.+. .+++-.|-
T Consensus 43 ~~r~---~I~~~G~Ip~LV~lL~s-----~~~~vq~~Aa~aL~nLa~~-~~~nk~~I~~~GaI~~Lv~lL~~~~~~~~~e 113 (233)
T 3tt9_A 43 EARK---RVNQLRGILKLLQLLKV-----QNEDVQRAVCGALRNLVFE-DNDNKLEVAELNGVPRLLQVLKQTRDLETKK 113 (233)
T ss_dssp HHHH---HHHHTTHHHHHHHGGGC-----CCHHHHHHHHHHHHHHHTT-CHHHHHHHHHTTHHHHHHHHHHHCCCHHHHH
T ss_pred HHHH---HHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHHhC-CHHHHHHHHHcCCHHHHHHHHccCCCHHHHH
Confidence 6777 66666654455556653 3577899999999999873 3344556677889999999997 56666666
Q ss_pred HHHHHHHHHhcccccchhhhhhhhhHHHHHHHHHHHHHHH----hh-----------CCCchhHHHHHHHHHHhcC-Chh
Q 037700 212 VATFIIYKILLHEEGLKYCCVLADRFFAVARALAQMTEKL----VE-----------QPSPRLLKHIICCYHRLSQ-SPR 275 (309)
Q Consensus 212 vAtfIlqKIL~~d~GL~YiC~t~eRF~aV~~vL~~mv~~l----~~-----------~ps~RLLKhIIrCY~RLs~-n~r 275 (309)
-|+-.+..+=.++.+-.- -+...+..++.-+ .. ..++.++.+...|---||- ++.
T Consensus 114 ~a~~aL~nLS~~~~~k~~---------i~~~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~na~~~L~nLss~~~~ 184 (233)
T 3tt9_A 114 QITGLLWNLSSNDKLKNL---------MITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSAGAD 184 (233)
T ss_dssp HHHHHHHHHHTSGGGHHH---------HHHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHHHHHHcChhhHHH---------HHhccHHHHHHHHhccccCCcccccccccccchHHHHHHHHHHHHHHhcCCHH
Confidence 677677766554443211 1112222222211 10 1256899999999999976 789
Q ss_pred hHhhhhhc
Q 037700 276 ACDGLRCC 283 (309)
Q Consensus 276 ar~aLr~~ 283 (309)
+|.++|+|
T Consensus 185 ~R~~~r~~ 192 (233)
T 3tt9_A 185 GRKAMRRC 192 (233)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHHC
Confidence 99999976
No 34
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=46.86 E-value=1.5e+02 Score=26.01 Aligned_cols=52 Identities=12% Similarity=0.079 Sum_probs=34.3
Q ss_pred hhhhhhhhhhccCChhHHHHHHhhcccccccccccccc--chhhHHHHHHHHHHHhcc
Q 037700 168 LTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVG--SDLSKQVATFIIYKILLH 223 (309)
Q Consensus 168 LtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~G--SelSKtvAtfIlqKIL~~ 223 (309)
-..-.+||.+.+.+.++- -..+++|..+..+..+ +.-.+-.|..++.++..+
T Consensus 107 ~~~~~~i~~ia~~~~~~~----~w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~ 160 (462)
T 1ibr_B 107 SSASQCVAGIACAEIPVN----QWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQD 160 (462)
T ss_dssp CSHHHHHHHHHHHHGGGT----CCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcccc----ccHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHh
Confidence 445566777777544320 1245667666777777 677788888888888765
No 35
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=46.24 E-value=28 Score=35.17 Aligned_cols=89 Identities=13% Similarity=0.130 Sum_probs=72.2
Q ss_pred cccccccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhcccccccccc
Q 037700 122 CMATFRAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTS 201 (309)
Q Consensus 122 cvAshp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLri 201 (309)
.++.++ +.|. .+.+++.---|..+|+. +.|.+|-...++++.|.. +++....+.+...++...+.
T Consensus 578 ~La~~~-----~~~~---~l~~~~~i~~Lv~lL~~-----~~~~v~~~a~~aL~~L~~--~~~~~~~i~~~g~i~~L~~L 642 (780)
T 2z6g_A 578 ILARDI-----HNRI---VIRGLNTIPLFVQLLYS-----PIENIQRVAAGVLCELAQ--DKEAAEAIEAEGATAPLTEL 642 (780)
T ss_dssp HHTTSH-----HHHH---HHHHTCCHHHHHHGGGC-----SCHHHHHHHHHHHHHHHT--SHHHHHHHHHTTCHHHHHHG
T ss_pred HHhcCh-----hhHH---HHHHCCcHHHHHHHHcC-----CCHHHHHHHHHHHHHHhc--CHHHHHHHHHCCCHHHHHHH
Confidence 555666 7777 77777765556666653 467899999999999974 57888888999999999999
Q ss_pred ccccchhhHHHHHHHHHHHhcccc
Q 037700 202 MEVGSDLSKQVATFIIYKILLHEE 225 (309)
Q Consensus 202 ME~GSelSKtvAtfIlqKIL~~d~ 225 (309)
++.+++--+..|...+.++..+..
T Consensus 643 l~~~~~~Vr~~A~~aL~~l~~~~~ 666 (780)
T 2z6g_A 643 LHSRNEGVATYAAAVLFRMSEDKP 666 (780)
T ss_dssp GGCSCHHHHHHHHHHHHHHHTTSC
T ss_pred HcCCCHHHHHHHHHHHHHHHcCCh
Confidence 999999999999999999887665
No 36
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=44.47 E-value=1.2e+02 Score=30.49 Aligned_cols=140 Identities=15% Similarity=0.143 Sum_probs=93.8
Q ss_pred cccc-cccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccc
Q 037700 122 CMAT-FRAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLT 200 (309)
Q Consensus 122 cvAs-hp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLr 200 (309)
-++. ++ +.|. ...++.-.-.|--+|.. +.+.++-...+.++-|...++++.-..+.+...||..++
T Consensus 74 ~La~~~~-----~~k~---~V~~~G~Ip~LV~LL~s-----~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV~ 140 (584)
T 3l6x_A 74 HLCYRND-----KVKT---DVRKLKGIPVLVGLLDH-----PKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVR 140 (584)
T ss_dssp HHHTTCH-----HHHH---HHHHTTHHHHHHHGGGC-----SSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHH
T ss_pred HHHcCCh-----HHHH---HHHHcCCcHHHHHHHCC-----CCHHHHHHHHHHHHHHHccCCHHHHHHHHHcCCHHHHHH
Confidence 5564 45 7777 66666654445555653 467899999999999998766777888889999999999
Q ss_pred ccccc-chhhHHHHHHHHHHHhcccccchhhhhhhhhHHHHHHHHHHHHHHH-----------------hhCCCchhHHH
Q 037700 201 SMEVG-SDLSKQVATFIIYKILLHEEGLKYCCVLADRFFAVARALAQMTEKL-----------------VEQPSPRLLKH 262 (309)
Q Consensus 201 iME~G-SelSKtvAtfIlqKIL~~d~GL~YiC~t~eRF~aV~~vL~~mv~~l-----------------~~~ps~RLLKh 262 (309)
.+..+ ++-.|--|+-.+..+=.++..-.-++ ...+..+|.-+ ...+++.++++
T Consensus 141 LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~---------~~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~n 211 (584)
T 3l6x_A 141 LLRKARDMDLTEVITGTLWNLSSHDSIKMEIV---------DHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTN 211 (584)
T ss_dssp HHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHH---------HHTHHHHHHHTHHHHHCCC----------CCCCHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHHhCCchhhHHHH---------hccHHHHHHHHhcccccccccccccccccccccHHHHHH
Confidence 99974 54456667767766655443222222 22233333222 11235789999
Q ss_pred HHHHHHHhcCC-hhhHhhhhhc
Q 037700 263 IICCYHRLSQS-PRACDGLRCC 283 (309)
Q Consensus 263 IIrCY~RLs~n-~rar~aLr~~ 283 (309)
..+|---||.+ +..|.++++|
T Consensus 212 Aa~~L~NLs~~~~~~R~~i~~~ 233 (584)
T 3l6x_A 212 TAGCLRNVSSERSEARRKLREC 233 (584)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHS
T ss_pred HHHHHHHHhcCCHHHHHHHHHc
Confidence 99999999864 5678877754
No 37
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=40.82 E-value=2.5e+02 Score=27.30 Aligned_cols=60 Identities=7% Similarity=0.149 Sum_probs=38.6
Q ss_pred CCcchhhhhhhhhhhhccCChhHHHHHHhhcccccccccccc---------------ccchhhHHHHHHHHHHHhccc
Q 037700 162 PHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSME---------------VGSDLSKQVATFIIYKILLHE 224 (309)
Q Consensus 162 p~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME---------------~GSelSKtvAtfIlqKIL~~d 224 (309)
+...++...++.++.+.+. +++....+. .++|...+++. ..++..+.....++.++-..|
T Consensus 191 ~d~~V~~~Al~~L~~i~~~-~~~~~~~~~--~~v~~l~~~L~~~~~~~~~~~~~~~~~~~~~~q~~il~~L~~l~~~~ 265 (618)
T 1w63_A 191 KNHGVLHTSVVLLTEMCER-SPDMLAHFR--KLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRND 265 (618)
T ss_dssp CCHHHHHHHHHHHHHHCCS-HHHHHHHHH--TTHHHHHHHHHHHHHSCCCTTTCSSSSSCHHHHHHHHHHHHHHTTTC
T ss_pred CCHhHHHHHHHHHHHHHHh-ChHHHHHHH--HHHHHHHHHHHHHHcCCCCccccccCCCCChHHHHHHHHHHHhCCCC
Confidence 3457788888888888764 555444333 46776665543 247777777777777766544
No 38
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=40.43 E-value=82 Score=33.08 Aligned_cols=135 Identities=15% Similarity=0.124 Sum_probs=87.5
Q ss_pred hhhhcccccccccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhh-ccc
Q 037700 116 ILKVYNCMATFRAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQ-TEI 194 (309)
Q Consensus 116 ~~~~~~cvAshp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~-tEi 194 (309)
.+..+..+|+++ ++.|. ..+++...--|-.+|.. +.+.+|-.++..||-|+..++ ....+.. .+.
T Consensus 601 Al~AL~NLa~~~----d~~~~---~Ii~aG~l~~Lv~LL~s-----~~~~Vq~~A~~~L~NLa~~~~--~~~~~v~~~g~ 666 (810)
T 3now_A 601 SLMALTNLASMN----ESVRQ---RIIKEQGVSKIEYYLME-----DHLYLTRAAAQCLCNLVMSED--VIKMFEGNNDR 666 (810)
T ss_dssp HHHHHHHHTTSC----HHHHH---HHHHTTHHHHHHHHHHS-----CCTTHHHHHHHHHHHHTTSHH--HHHHHHSSSSH
T ss_pred HHHHHHHHhcCC----HHHHH---HHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHhCChH--HHHHHHhccCc
Confidence 344444677774 26777 77777654444455542 347799999999999998543 4444444 789
Q ss_pred cccccccccccchhhHHHHHHHHHHHhc-ccccchhhhhhhhhHHHHHHHHHHHHHHHhhCCCchhHHHHHHHHHHhcC
Q 037700 195 FPCCLTSMEVGSDLSKQVATFIIYKILL-HEEGLKYCCVLADRFFAVARALAQMTEKLVEQPSPRLLKHIICCYHRLSQ 272 (309)
Q Consensus 195 iPlCLriME~GSelSKtvAtfIlqKIL~-~d~GL~YiC~t~eRF~aV~~vL~~mv~~l~~~ps~RLLKhIIrCY~RLs~ 272 (309)
+|..+..++.+++-.|..|...+.-|-. ++..-+++... + ..+..+ ..|...++..+-+....|-..|+.
T Consensus 667 l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~-~------g~I~~L-v~LL~s~d~~vq~~A~~aL~NL~~ 737 (810)
T 3now_A 667 VKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAI-A------SWLDIL-HTLIANPSPAVQHRGIVIILNMIN 737 (810)
T ss_dssp HHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTS-T------THHHHH-HHHHTCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHH-c------CCHHHH-HHHHCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999888888887777665 33333333332 1 122222 244556777777777777766654
No 39
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=38.68 E-value=79 Score=31.50 Aligned_cols=143 Identities=13% Similarity=0.191 Sum_probs=92.4
Q ss_pred cccccccchhhHHHHHHHHHhcCc-cccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccc
Q 037700 124 ATFRAIKSSMTRLISVLMVLAKLP-LYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSM 202 (309)
Q Consensus 124 Ashp~~~~~eTR~~~~~Fl~A~ip-lYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriM 202 (309)
+.++ ++|. .+++.++- .-+-+.|. .+.+.+|-.+.|.++.|.-.+.++++.++...+|+|..+..+
T Consensus 62 ~~~~-----~~~~---l~~~~~~v~~ll~~lL~-----D~~~~Vr~~A~gaLrnL~~~~g~d~~~~l~~~~il~~L~~~l 128 (684)
T 4gmo_A 62 VQDA-----KCRK---LLLREQVVHIVLTETLT-----DNNIDSRAAGWEILKVLAQEEEADFCVHLYRLDVLTAIEHAA 128 (684)
T ss_dssp TTSH-----HHHH---HHHHTTHHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTHHHHHHHHH
T ss_pred HcCc-----HHHH---HHHHcCCHHHHHHHHcC-----CCCHHHHHHHHHHHHHHHhhcCchHHHHHHHcChHHHHHHHH
Confidence 3566 9999 89988764 44566664 345679999999999999888999999999999999887765
Q ss_pred cccch-----------hhHHHHHHH---HHHHhcccccchhhhhhhhh-HHHHH--HHHHHHHHHHhh-C-CCchhHHHH
Q 037700 203 EVGSD-----------LSKQVATFI---IYKILLHEEGLKYCCVLADR-FFAVA--RALAQMTEKLVE-Q-PSPRLLKHI 263 (309)
Q Consensus 203 E~GSe-----------lSKtvAtfI---lqKIL~~d~GL~YiC~t~eR-F~aV~--~vL~~mv~~l~~-~-ps~RLLKhI 263 (309)
+...+ .++.-...+ ...++ .-|.+.|.+.+. +.+|. ..+...+..+.. + -+..+...+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~lL~~L~e~s~~~~~~v~~~~~l~~l~~~L~~~~~~~~~v~~~a 205 (684)
T 4gmo_A 129 KAVLETLTTSEPPFSKLLKAQQRLVWDITGSLL---VLIGLLALARDEIHEAVATKQTILRLLFRLISADIAPQDIYEEA 205 (684)
T ss_dssp HHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHH---HHHHHHHHHCHHHHHHHHTCHHHHHHHHHHHHHCCSCHHHHHHH
T ss_pred HhhHHHHhhhccccccccHHHHHHHHHHHHHHH---HHHHHHHhCCHHHHHHHHhcccHHHHHHHHHhcCCCcHHHHHHH
Confidence 43221 122111111 11111 235667766554 33443 345555555542 2 346788889
Q ss_pred HHHHHHhcC-ChhhHhhhhh
Q 037700 264 ICCYHRLSQ-SPRACDGLRC 282 (309)
Q Consensus 264 IrCY~RLs~-n~rar~aLr~ 282 (309)
..|-.-|++ |+.+.+.+..
T Consensus 206 ~~~L~~ls~dn~~~~~~i~~ 225 (684)
T 4gmo_A 206 ISCLTTLSEDNLKVGQAITD 225 (684)
T ss_dssp HHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHhccCHHHHHHHHh
Confidence 999888877 5666666654
No 40
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=37.08 E-value=2.5e+02 Score=27.63 Aligned_cols=138 Identities=15% Similarity=0.094 Sum_probs=71.7
Q ss_pred HHHHHHHhcCcc--hHHHHHHHHHhccc--ccCchhhHhhhhh--c--------hHHHHHHHHHHhhccCCCC-C-----
Q 037700 28 VAYWIQALQSHE--TKERALLILSQNKE--IRKDLAPLLWNSI--G--------TISALLQEIISVYRTLSSP-N----- 87 (309)
Q Consensus 28 v~q~I~~L~~~~--~Re~AL~eLsk~re--~~~dLap~LW~S~--G--------tia~LLQEIisvYp~Ls~p-~----- 87 (309)
+..+..||.+++ -|-.||.-|++.++ ..+++.+.+=... + +-+.-+--+...+|.+-++ .
T Consensus 113 iN~l~kDl~~~n~~ir~lALr~L~~i~~~e~~~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p~~~~~~~~~~~l 192 (621)
T 2vgl_A 113 NNAIKNDLASRNPTFMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGDWTSRV 192 (621)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHHHHCCHHHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGGGCCCCSCHHHH
T ss_pred HHHHHHhcCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhChhhcCchhHHHHH
Confidence 445667888654 47799999998765 2333333333332 1 1223344566677766552 2
Q ss_pred ---CChhhhhhHHHHHHhhhhhhcccCchhhhhhhcccccccccccchhhHHHHHHHHHhcCccccccccccccC-----
Q 037700 88 ---LTETASTRVSNALALFQVTFTSIGSSFAILKVYNCMATFRAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDK----- 159 (309)
Q Consensus 88 ---Lt~~~SnRVcnaLaLlQ~~~~~~~~~~~~~~~~~cvAshp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k----- 159 (309)
|......-+.+|++++. -++.+. |+.-. .++. .+--+|..++....-
T Consensus 193 ~~lL~d~d~~V~~~a~~~l~-----------------~i~~~~----~~~~~---~~~~-~~~~~L~~ll~~~~~~~~~~ 247 (621)
T 2vgl_A 193 VHLLNDQHLGVVTAATSLIT-----------------TLAQKN----PEEFK---TSVS-LAVSRLSRIVTSASTDLQDY 247 (621)
T ss_dssp HHHTTCSCHHHHHHHHHHHH-----------------HHHHHC----HHHHT---THHH-HHHHHHHHHHHCCSSSCSTT
T ss_pred HHHhCCCCccHHHHHHHHHH-----------------HHHHhC----hHHHH---HHHH-HHHHHHHHHHhCCCCCccch
Confidence 22333344567777666 444432 12100 1110 000112222221100
Q ss_pred ---CCCCcchhhhhhhhhhhhccCChhHHHHHHh
Q 037700 160 ---EKPHEYLRLTSLGVIGTLVKSDDPEAIRFLL 190 (309)
Q Consensus 160 ---~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL 190 (309)
.-+.|+++...|..++.+.+.+|++.-+.+.
T Consensus 248 ~~~~~~~~w~qi~il~ll~~~~~~~d~~~~~~l~ 281 (621)
T 2vgl_A 248 TYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLT 281 (621)
T ss_dssp EETTEESHHHHHHHHHHGGGSSSCSSHHHHHHHH
T ss_pred hhcCCCCchHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 1235889999999999999887777655443
No 41
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=34.43 E-value=3.8e+02 Score=27.23 Aligned_cols=144 Identities=15% Similarity=0.115 Sum_probs=77.6
Q ss_pred ChhHHHHHHHHhcCcchHHHHHHHHHhcccccCchhhHhhhhhchHHHHHHHHHHhhccCCCCCCChhhhhhHHHHHHhh
Q 037700 24 GPASVAYWIQALQSHETKERALLILSQNKEIRKDLAPLLWNSIGTISALLQEIISVYRTLSSPNLTETASTRVSNALALF 103 (309)
Q Consensus 24 ~~~~v~q~I~~L~~~~~Re~AL~eLsk~re~~~dLap~LW~S~Gtia~LLQEIisvYp~Ls~p~Lt~~~SnRVcnaLaLl 103 (309)
|++.+.+.+....+|+...+|-..|-+- +..|+ ....|++.+.+. +.....|...++.|=
T Consensus 3 d~~~l~~~L~~~~spd~~~rAe~~L~~~-~~~p~----------~~~~L~~il~~~---------~~~~~vR~~A~i~lk 62 (960)
T 1wa5_C 3 DLETVAKFLAESVIASTAKTSERNLRQL-ETQDG----------FGLTLLHVIAST---------NLPLSTRLAGALFFK 62 (960)
T ss_dssp HHHHHHHHHHHTTSGGGHHHHHHHHHHH-HTSTT----------HHHHHHHHHHCT---------TSCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhcCCCHHHHHHHHHHHh-hcCCC----------HHHHHHHHHhcC---------CCCHHHHHHHHHHHH
Confidence 5678899999999997544466556332 33343 333444444221 112334555555443
Q ss_pred hhhhcccCchhhhhhhccccccccc------ccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhh
Q 037700 104 QVTFTSIGSSFAILKVYNCMATFRA------IKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTL 177 (309)
Q Consensus 104 Q~~~~~~~~~~~~~~~~~cvAshp~------~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaL 177 (309)
. .+..|-. --+++.| ..+|.++.-.+. . .+ ..+|-..=-+|+.+
T Consensus 63 n-----------------~i~~~w~~~~~~~~l~~~~k----~~ik~~ll~~l~----~----~~-~~ir~~l~~~ia~i 112 (960)
T 1wa5_C 63 N-----------------FIKRKWVDENGNHLLPANNV----ELIKKEIVPLMI----S----LP-NNLQVQIGEAISSI 112 (960)
T ss_dssp H-----------------HHHHHSBCSSSCBSSCHHHH----HHHHHHHHHHHH----H----SC-HHHHHHHHHHHHHH
T ss_pred H-----------------HHHhcCCCcccCCCCCHHHH----HHHHHHHHHHHH----h----CC-HHHHHHHHHHHHHH
Confidence 3 3322210 0122443 355555443332 1 12 56776666677887
Q ss_pred ccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHHHhc
Q 037700 178 VKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKILL 222 (309)
Q Consensus 178 vK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL~ 222 (309)
++.|-++ -..|++|..+..+..++...+-.|..++.+|..
T Consensus 113 a~~d~p~-----~Wp~ll~~L~~~l~s~~~~~~~~aL~~l~~i~~ 152 (960)
T 1wa5_C 113 ADSDFPD-----RWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFK 152 (960)
T ss_dssp HHHHSTT-----TCTTHHHHHHTTCCSSCTTHHHHHHHHHHHHHG
T ss_pred HHhhCcc-----chhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 7754331 124455655666777777777788888888865
No 42
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=34.12 E-value=49 Score=32.36 Aligned_cols=56 Identities=9% Similarity=0.175 Sum_probs=42.1
Q ss_pred CCCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHHHhccc
Q 037700 161 KPHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKILLHE 224 (309)
Q Consensus 161 rp~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL~~d 224 (309)
.+.++.|-..|-.+|.+. ++|++. +++|...+.+...+..-|..|..-+.||...+
T Consensus 118 ~~n~~vr~lAL~~L~~i~---~~~~~~-----~l~~~l~~~L~~~~~~VRk~A~~al~~l~~~~ 173 (618)
T 1w63_A 118 HSTQFVQGLALCTLGCMG---SSEMCR-----DLAGEVEKLLKTSNSYLRKKAALCAVHVIRKV 173 (618)
T ss_dssp CSSSHHHHHHHHHHHHHC---CHHHHH-----HHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCHhHHHHHHHHHHhcC---CHHHHH-----HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHC
Confidence 477888888888877776 345443 45677777788888888888999999987654
No 43
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=32.95 E-value=1.3e+02 Score=26.54 Aligned_cols=108 Identities=10% Similarity=0.004 Sum_probs=79.2
Q ss_pred chhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHHHhcc-cccchhhhhhhhhHHHHHHH
Q 037700 165 YLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKILLH-EEGLKYCCVLADRFFAVARA 243 (309)
Q Consensus 165 yLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL~~-d~GL~YiC~t~eRF~aV~~v 243 (309)
.++....+.+.-|.+.+ ++....+.+...||...+.+..+++--|..|.-.+..|=.+ ++.-..+.. +..
T Consensus 25 ~~q~~Aa~~l~~L~~~~-~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~--------~Ga 95 (233)
T 3tt9_A 25 SRISAAATFIQHECFQK-SEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAE--------LNG 95 (233)
T ss_dssp HHHHHHHHHHHHHHHHC-HHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHH--------TTH
T ss_pred HHHHHHHHHHHHHHcCC-cHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHH--------cCC
Confidence 56677777887777643 44455566778889999999999999999999999988664 332222211 234
Q ss_pred HHHHHHHHhhCCCchhHHHHHHHHHHhcCChhhHhhhh
Q 037700 244 LAQMTEKLVEQPSPRLLKHIICCYHRLSQSPRACDGLR 281 (309)
Q Consensus 244 L~~mv~~l~~~ps~RLLKhIIrCY~RLs~n~rar~aLr 281 (309)
+..+|.-|...++..+.+++...-..||.++..|..+.
T Consensus 96 I~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~k~~i~ 133 (233)
T 3tt9_A 96 VPRLLQVLKQTRDLETKKQITGLLWNLSSNDKLKNLMI 133 (233)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHHHH
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHcChhhHHHHH
Confidence 55666666556889999999999999999988877664
No 44
>3dev_A SH1221; alpha-beta protein., structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium, NESG; 3.10A {Staphylococcus haemolyticus}
Probab=28.86 E-value=60 Score=29.93 Aligned_cols=78 Identities=14% Similarity=0.163 Sum_probs=55.6
Q ss_pred cccccccccccccchhhHHHHHHHHHHHhcccccchhhhhhhhhHHHHHHHHHH-----HH-HHHhhCCCchhHHHHHHH
Q 037700 193 EIFPCCLTSMEVGSDLSKQVATFIIYKILLHEEGLKYCCVLADRFFAVARALAQ-----MT-EKLVEQPSPRLLKHIICC 266 (309)
Q Consensus 193 EiiPlCLriME~GSelSKtvAtfIlqKIL~~d~GL~YiC~t~eRF~aV~~vL~~-----mv-~~l~~~ps~RLLKhIIrC 266 (309)
|||--.++-++.|-+++|.+|+-+..-|+.|-.++.|-..|++=|.+++..+.. .+ ..+ .+-+..-++..-+.
T Consensus 128 eiv~~~~~~~~~~~~i~~~~A~~L~~GI~tDTg~F~~~~tt~~t~~aaa~L~~~Gad~~~i~~~l-~~~s~~~~~l~~~~ 206 (320)
T 3dev_A 128 EIIFDFISHFNDLSIIDEHVARVLYLGIVGDTGRFLFSNTSPHTMEVASQLLAYPFNHNAELNKM-SEKDPKLMPFQGYV 206 (320)
T ss_dssp HHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHTTTTTSTTCCHHHHHHHHHHHHSSSCHHHHHHHH-HCBCGGGHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCHHHHHHHHHHHHHHccCcCCCCCCHHHHHHHHHHHHcCCCHHHHHHHH-HhCCHHHHHHHHHH
Confidence 344434444566789999999999999999999999988888888888887752 23 445 44455555555555
Q ss_pred HHHhc
Q 037700 267 YHRLS 271 (309)
Q Consensus 267 Y~RLs 271 (309)
..++-
T Consensus 207 l~~~~ 211 (320)
T 3dev_A 207 LQNFE 211 (320)
T ss_dssp HHSCC
T ss_pred HhceE
Confidence 55543
No 45
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=28.36 E-value=2.7e+02 Score=26.95 Aligned_cols=52 Identities=12% Similarity=0.061 Sum_probs=33.3
Q ss_pred hhhhhhhhhhccCChhHHHHHHhhcccccccccccccc--chhhHHHHHHHHHHHhcc
Q 037700 168 LTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVG--SDLSKQVATFIIYKILLH 223 (309)
Q Consensus 168 LtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~G--SelSKtvAtfIlqKIL~~ 223 (309)
-+...+|+.+++.+-++ --..+++|..+..+..+ +.-.|..|..++.++..+
T Consensus 107 ~~~~~~l~~i~~~~~~~----~~w~~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~~~ 160 (876)
T 1qgr_A 107 SSASQCVAGIACAEIPV----NQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQD 160 (876)
T ss_dssp CHHHHHHHHHHHHHGGG----TCCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcc----cccHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHh
Confidence 56677788877653220 01245667777777777 666777788777777653
No 46
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=28.21 E-value=5.4e+02 Score=26.96 Aligned_cols=212 Identities=13% Similarity=0.076 Sum_probs=120.3
Q ss_pred chHHHHHHHHHhcccccCchhhHh-hhhhchHHHHHHHHHHhhccCCCCCCChhhhhhHHHHHHhhhhhhcccCchhhhh
Q 037700 39 ETKERALLILSQNKEIRKDLAPLL-WNSIGTISALLQEIISVYRTLSSPNLTETASTRVSNALALFQVTFTSIGSSFAIL 117 (309)
Q Consensus 39 ~~Re~AL~eLsk~re~~~dLap~L-W~S~Gtia~LLQEIisvYp~Ls~p~Lt~~~SnRVcnaLaLlQ~~~~~~~~~~~~~ 117 (309)
.-|+.|+.-|.|+-.. .++.-.- |---|-.--+|.=--++.+...+..+.-+..+|---+++|-.
T Consensus 165 ~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~l~~------------- 230 (810)
T 3now_A 165 AARDGVIELITRNVHY-TALEWAERLVEIRGLCRLLDVCSELEDYKYESAMDITGSSSTIASVCLAR------------- 230 (810)
T ss_dssp HHHHHHHHHHHHHTTC-TTTTHHHHHHHTTHHHHHHHHHTCCSSSCCSSCCCCCTTHHHHHHHHHHH-------------
T ss_pred hhHHHHHHHHHHhCCc-cccccccchhhHhhHHHHHHHHhcCccccccccCCCChhHHHHHHHHHHH-------------
Confidence 6799999999886421 2222111 322322233332222222222234455666778777766655
Q ss_pred hhcccccccccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHHHHHh-hccccc
Q 037700 118 KVYNCMATFRAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAIRFLL-QTEIFP 196 (309)
Q Consensus 118 ~~~~cvAshp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI~fLL-~tEiiP 196 (309)
+|.++-++++ -..-+..|..|+++++ .+.+.-.+ +-..-.+.++.-. .+|+-+.+. +.+.+|
T Consensus 231 -~~~~~~~~~~--~~~~~~~~~~~~~~~~-----------~~~~~~~~--~~a~~alt~i~~g-~~~~~~~~~~~~G~v~ 293 (810)
T 3now_A 231 -IYENMYYDEA--KARFTDQIDEYIKDKL-----------LAPDMESK--VRVTVAITALLNG-PLDVGNQVVAREGILQ 293 (810)
T ss_dssp -HHHTCCSHHH--HHHHHHHHHHHHHHHH-----------SSCCHHHH--HHHHHHHHHHHSS-SHHHHHHHHHTTTHHH
T ss_pred -HHHHhccchh--HHHHHHHHHHHHHHHh-----------ccCChHhH--HHHHHHHHHHhcC-CHHHHHHHHhccchHH
Confidence 5666666552 1244556788998875 12222222 4445555555554 445555555 556888
Q ss_pred cccccccccchhhHHHHHHHHHHHhcccccc--------hhhhhhh------hhHHHHHHHHHHH---------------
Q 037700 197 CCLTSMEVGSDLSKQVATFIIYKILLHEEGL--------KYCCVLA------DRFFAVARALAQM--------------- 247 (309)
Q Consensus 197 lCLriME~GSelSKtvAtfIlqKIL~~d~GL--------~YiC~t~------eRF~aV~~vL~~m--------------- 247 (309)
..++......+.-+..|.-.+.++-.+.+-- ....... -|+.|.. +|.++
T Consensus 294 ~li~Ll~s~~~~~q~~A~~al~~aa~~~~~R~~I~~~gv~~L~~Ll~s~~~~vr~~Al~-~L~kl~s~~~~d~~~~~~~~ 372 (810)
T 3now_A 294 MILAMATTDDELQQRVACECLIAASSKKDKAKALCEQGVDILKRLYHSKNDGIRVRALV-GLCKLGSYGGQDAAIRPFGD 372 (810)
T ss_dssp HHHHHHHSSCHHHHHHHHHHHHHHTTSHHHHHTTHHHHHHHHHHHTTCSCHHHHHHHHH-HHHHHHTTTTTTTSCCSSTT
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHcCCcHHHHHHHHcCcHHHHHHHcCCCHHHHHHHHH-HHHHhccccccCccccchhh
Confidence 8888888888888888887777765554322 2221111 1222222 22222
Q ss_pred ---------HHHHhhCC--CchhHHHHHHHHHHhcCChhhHhhhhh
Q 037700 248 ---------TEKLVEQP--SPRLLKHIICCYHRLSQSPRACDGLRC 282 (309)
Q Consensus 248 ---------v~~l~~~p--s~RLLKhIIrCY~RLs~n~rar~aLr~ 282 (309)
..++..+| ++...++.+.+-..||.++..|+.++.
T Consensus 373 g~i~~Lv~~l~~lL~~~~~d~~v~~~AveaLayLS~~~~vk~~lv~ 418 (810)
T 3now_A 373 GAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIE 418 (810)
T ss_dssp THHHHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCcHHHHHHHH
Confidence 11222344 788999999999999999999998874
No 47
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=27.69 E-value=3.1e+02 Score=26.38 Aligned_cols=182 Identities=9% Similarity=0.022 Sum_probs=0.0
Q ss_pred ChhHHHHHHHHh-cCcc--hHHHHHHHHHhcccccCchhhHhhhhhchHHHHHHHHHHhhccCCCCCCChhhhhhHHHHH
Q 037700 24 GPASVAYWIQAL-QSHE--TKERALLILSQNKEIRKDLAPLLWNSIGTISALLQEIISVYRTLSSPNLTETASTRVSNAL 100 (309)
Q Consensus 24 ~~~~v~q~I~~L-~~~~--~Re~AL~eLsk~re~~~dLap~LW~S~Gtia~LLQEIisvYp~Ls~p~Lt~~~SnRVcnaL 100 (309)
|++.+.+.+... .+|+ .|..|-..|.+-.+. +..|....|++.+.+. +.....|-..++
T Consensus 2 d~~~l~~~L~~~~~s~d~~~r~~Ae~~L~~~~~~---------~~~~~~~~l~~il~~~---------~~~~~vR~~A~~ 63 (861)
T 2bpt_A 2 STAEFAQLLENSILSPDQNIRLTSETQLKKLSND---------NFLQFAGLSSQVLIDE---------NTKLEGRILAAL 63 (861)
T ss_dssp CHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHH---------CHHHHHHHHHHHHTCT---------TSCHHHHHHHHH
T ss_pred CHHHHHHHHHHcccCcCHHHHHHHHHHHHHHHhh---------CHHHHHHHHHHHHhCC---------CCChHHHHHHHH
Q ss_pred HhhhhhhcccCchhhhhhhccccccc----------------ccccchhhHHHHHHHHHhcCccccccccccccCCCCCc
Q 037700 101 ALFQVTFTSIGSSFAILKVYNCMATF----------------RAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHE 164 (309)
Q Consensus 101 aLlQ~~~~~~~~~~~~~~~~~cvAsh----------------p~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~E 164 (309)
.|=. .+-.+ | +.-. ..++..+.-.| ..+-+
T Consensus 64 ~lk~-----------------~i~~~w~~~~~~~~~~~~~~l~-----~~~~---~~ik~~ll~~l---------~~~~~ 109 (861)
T 2bpt_A 64 TLKN-----------------ELVSKDSVKTQQFAQRWITQVS-----PEAK---NQIKTNALTAL---------VSIEP 109 (861)
T ss_dssp HHHT-----------------TTCCSSHHHHHHHHHHHHHHSC-----HHHH---HHHHHHHHHHH---------TCSSH
T ss_pred HHHh-----------------hccCcChHHHHHHHHhHhhhCC-----HHHH---HHHHHHHHHHH---------CCCch
Q ss_pred chhhhhhhhhhhhccCChhHHHHHHhhcccccccccccccc-chhhHHHHHHHHHHHhcccccchhhhhhhhh---HHHH
Q 037700 165 YLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVG-SDLSKQVATFIIYKILLHEEGLKYCCVLADR---FFAV 240 (309)
Q Consensus 165 yLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~G-SelSKtvAtfIlqKIL~~d~GL~YiC~t~eR---F~aV 240 (309)
.+|-..-.+|+.+++.+-++- -..|++|..+..+..+ +.-.+-.|..++..|..+-. +. |...
T Consensus 110 ~vr~~~~~~l~~i~~~~~p~~----~w~~ll~~L~~~l~~~~~~~~r~~al~~l~~l~~~~~---------~~~~~~~~~ 176 (861)
T 2bpt_A 110 RIANAAAQLIAAIADIELPHG----AWPELMKIMVDNTGAEQPENVKRASLLALGYMCESAD---------PQSQALVSS 176 (861)
T ss_dssp HHHHHHHHHHHHHHHHHGGGT----CCHHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSS---------TTSSTTGGG
T ss_pred HHHHHHHHHHHHHHHhhCccc----ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCC---------hhhhHHHHH
Q ss_pred HHHHHHHHHHHhhCC--CchhHHHHHHHHHHh
Q 037700 241 ARALAQMTEKLVEQP--SPRLLKHIICCYHRL 270 (309)
Q Consensus 241 ~~vL~~mv~~l~~~p--s~RLLKhIIrCY~RL 270 (309)
..-+-..+.+...++ ++.+-+..++|+..+
T Consensus 177 ~~~ll~~l~~~l~~~~~~~~vr~~al~~l~~~ 208 (861)
T 2bpt_A 177 SNNILIAIVQGAQSTETSKAVRLAALNALADS 208 (861)
T ss_dssp HHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
No 48
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=26.25 E-value=82 Score=31.38 Aligned_cols=162 Identities=15% Similarity=0.183 Sum_probs=88.4
Q ss_pred chHHHH---HHHHHhcccccCchhhHhhhhhchHHHH---HHHHHHhhccCCCC-CCChhhhhhHH-----HHHHhhhhh
Q 037700 39 ETKERA---LLILSQNKEIRKDLAPLLWNSIGTISAL---LQEIISVYRTLSSP-NLTETASTRVS-----NALALFQVT 106 (309)
Q Consensus 39 ~~Re~A---L~eLsk~re~~~dLap~LW~S~Gtia~L---LQEIisvYp~Ls~p-~Lt~~~SnRVc-----naLaLlQ~~ 106 (309)
+-|+.| |..|+.. .-+|..-.+|.+ |+++.| |+.+.+......++ ......+.+.- |++.+|-
T Consensus 91 ~Vr~~A~gaLrnL~~~--~g~d~~~~l~~~-~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~-- 165 (684)
T 4gmo_A 91 DSRAAGWEILKVLAQE--EEADFCVHLYRL-DVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIG-- 165 (684)
T ss_dssp HHHHHHHHHHHHHHHH--SCHHHHHHHHHT-THHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHhh--cCchHHHHHHHc-ChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHH--
Confidence 456544 4444433 234666677865 445544 44444444443332 22222222222 4455554
Q ss_pred hcccCchhhhhhhcccccccccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhHHH
Q 037700 107 FTSIGSSFAILKVYNCMATFRAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPEAI 186 (309)
Q Consensus 107 ~~~~~~~~~~~~~~~cvAshp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~evI 186 (309)
|++.+. .+... .+.+......|..+|-..++ --+.++.+.+..+.++.. |+++.+
T Consensus 166 ---------------~L~e~s----~~~~~---~v~~~~~l~~l~~~L~~~~~--~~~~v~~~a~~~L~~ls~-dn~~~~ 220 (684)
T 4gmo_A 166 ---------------LLALAR----DEIHE---AVATKQTILRLLFRLISADI--APQDIYEEAISCLTTLSE-DNLKVG 220 (684)
T ss_dssp ---------------HHHHHC----HHHHH---HHHTCHHHHHHHHHHHHHCC--SCHHHHHHHHHHHHHHHT-TCHHHH
T ss_pred ---------------HHHhCC----HHHHH---HHHhcccHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHhc-cCHHHH
Confidence 666544 13333 44444444445555532222 234688888998888776 455677
Q ss_pred HHHhhcccccc--ccccccccchhhHHHHHHHHHHHhcccccchhh
Q 037700 187 RFLLQTEIFPC--CLTSMEVGSDLSKQVATFIIYKILLHEEGLKYC 230 (309)
Q Consensus 187 ~fLL~tEiiPl--CLriME~GSelSKtvAtfIlqKIL~~d~GL~Yi 230 (309)
.-+.+.....+ ++-.+..+++..|.+|..|+..|...-..+.|.
T Consensus 221 ~~i~~~~~~~~~~~ll~~~~~~~~~~~la~giL~Ni~~~~~~~d~s 266 (684)
T 4gmo_A 221 QAITDDQETHVYDVLLKLATGTDPRAVMACGVLHNVFTSLQWMDHS 266 (684)
T ss_dssp HHHHTCCSSCHHHHHHHHHHSSCTTHHHHHHHHHHHHHHHTCBTTB
T ss_pred HHHHhcchHHHHHHHHHHhcCCcHHHHHHHHHHHhHhhhhhhhhcc
Confidence 77777665544 333345678888999999999987554444443
No 49
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=24.56 E-value=14 Score=35.86 Aligned_cols=58 Identities=14% Similarity=0.104 Sum_probs=44.2
Q ss_pred CcchhhhhhhhhhhhccCChh-HHHHHHhhccccccccc-cccccchhhHHHHHHHHHHHh
Q 037700 163 HEYLRLTSLGVIGTLVKSDDP-EAIRFLLQTEIFPCCLT-SMEVGSDLSKQVATFIIYKIL 221 (309)
Q Consensus 163 ~EyLRLtSLGVIgaLvK~dd~-evI~fLL~tEiiPlCLr-iME~GSelSKtvAtfIlqKIL 221 (309)
.+.+|-.+++++|.|++.-.. ++..|+ ...++|-.++ .++.+++-.|..|.+.+..+-
T Consensus 811 ~~~vr~~a~~~l~~l~~~~~~~~~~~~~-~~~~i~~ll~~~l~~~~~~~r~~a~~a~~~~~ 870 (876)
T 1qgr_A 811 TDGVVACAAGLIGDLCTAFGKDVLKLVE-ARPMIHELLTEGRRSKTNKAKTLARWATKELR 870 (876)
T ss_dssp CHHHHHHHHHHHHHHHHHHCTHHHHHHH-TSHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCcHHHHHHH-hcHHHHHHHHHHhhcCCHhHHHHHHHHHHHHH
Confidence 678999999999999986555 666666 4455666666 777788888998988776653
No 50
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=23.16 E-value=2.1e+02 Score=28.68 Aligned_cols=107 Identities=8% Similarity=-0.014 Sum_probs=76.8
Q ss_pred hhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHHHhcc--cccchhhhhhhhhHHHHHHH
Q 037700 166 LRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKILLH--EEGLKYCCVLADRFFAVARA 243 (309)
Q Consensus 166 LRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL~~--d~GL~YiC~t~eRF~aV~~v 243 (309)
++.-....+.-|.+ .+.+.-..+.+...||...+.+..+++--|..|+-.+..|-.+ ++.-..+.. +.+
T Consensus 64 ~q~~Aa~~L~~La~-~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~--------~Ga 134 (584)
T 3l6x_A 64 VKSNAAAYLQHLCY-RNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKN--------CDG 134 (584)
T ss_dssp HHHHHHHHHHHHHT-TCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHHHHHH--------TTH
T ss_pred HHHHHHHHHHHHHc-CChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHH--------cCC
Confidence 33444444555554 2444556667778889999999999999999999999998764 333332221 245
Q ss_pred HHHHHHHHhhCCCchhHHHHHHHHHHhcCChhhHhhhh
Q 037700 244 LAQMTEKLVEQPSPRLLKHIICCYHRLSQSPRACDGLR 281 (309)
Q Consensus 244 L~~mv~~l~~~ps~RLLKhIIrCY~RLs~n~rar~aLr 281 (309)
+..+|.-|...++..+.+++..|-..||.++..+..+.
T Consensus 135 Ip~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~ 172 (584)
T 3l6x_A 135 VPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIV 172 (584)
T ss_dssp HHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhhHHHH
Confidence 66677766666788999999999999999988777663
No 51
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=21.76 E-value=1.2e+02 Score=30.12 Aligned_cols=105 Identities=9% Similarity=0.107 Sum_probs=66.2
Q ss_pred CCcchhhhhhhhhhhhccCChhHHHHHHhhccccccccccccccchhhHHHHHHHHHHHhcccccchhhhhhhhhHH-HH
Q 037700 162 PHEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVGSDLSKQVATFIIYKILLHEEGLKYCCVLADRFF-AV 240 (309)
Q Consensus 162 p~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~GSelSKtvAtfIlqKIL~~d~GL~YiC~t~eRF~-aV 240 (309)
+...+|..++..++.+++.........+ .+++|..++.+..+++-.|..|.-.+.++.... ++.+. ++
T Consensus 186 ~~~~vR~~A~~aL~~~~~~~~~~~~~~~--~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~---------~~~~~~~l 254 (852)
T 4fdd_A 186 SSPKIRSHAVACVNQFIISRTQALMLHI--DSFIENLFALAGDEEPEVRKNVCRALVMLLEVR---------MDRLLPHM 254 (852)
T ss_dssp SSHHHHHHHHHHHHTTTTTTCHHHHTSH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHC---------HHHHGGGH
T ss_pred CCHHHHHHHHHHHHHHHhcccHHHHHHH--HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhC---------HHHHHHHH
Confidence 4667999999999999986554322211 246677666666777777777777777666532 11111 12
Q ss_pred HHHHHHHHHHHhhCCCchhHHHHHHHHHHhcCChhhHh
Q 037700 241 ARALAQMTEKLVEQPSPRLLKHIICCYHRLSQSPRACD 278 (309)
Q Consensus 241 ~~vL~~mv~~l~~~ps~RLLKhIIrCY~RLs~n~rar~ 278 (309)
..++.-++. +..++++.+-...+.+...+++++..++
T Consensus 255 ~~l~~~l~~-~~~~~~~~vr~~a~e~l~~l~~~~~~~~ 291 (852)
T 4fdd_A 255 HNIVEYMLQ-RTQDQDENVALEACEFWLTLAEQPICKD 291 (852)
T ss_dssp HHHHHHHHH-HHTCSSHHHHHHHHHHHHHHTTSTTHHH
T ss_pred HHHHHHHHH-HccCCcHHHHHHHHHHHHHHhcchhHHH
Confidence 334444433 3456778887888888888888765444
No 52
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=21.22 E-value=3.7e+02 Score=24.17 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=76.0
Q ss_pred hhHHHHHHHHhcCcchHHHHHHHHHhcccccCchhhHhhhhhchHHHHHHHHHHhhccCCCCCCChhhhhhHHHHHHhhh
Q 037700 25 PASVAYWIQALQSHETKERALLILSQNKEIRKDLAPLLWNSIGTISALLQEIISVYRTLSSPNLTETASTRVSNALALFQ 104 (309)
Q Consensus 25 ~~~v~q~I~~L~~~~~Re~AL~eLsk~re~~~dLap~LW~S~Gtia~LLQEIisvYp~Ls~p~Lt~~~SnRVcnaLaLlQ 104 (309)
.+.|..|+.+-..... +..+..|.+-||..-+ ..+....-+|.+|.+. |
T Consensus 14 ~~~v~~lln~A~~~~~-~~kl~~L~qa~el~~~------~dp~ll~~~l~~il~~------------------------~ 62 (257)
T 3gs3_A 14 RAKVVDWCNELVIASP-STKCELLAKVQETVLG------SCAELAEEFLESVLSL------------------------A 62 (257)
T ss_dssp HHHHHHHHHHHTTCCH-HHHHHHHHHHHHHHTT------TTGGGHHHHHHHHHGG------------------------G
T ss_pred HHHHHHHHHHhhhcCc-HHHHHHHHHHHHHHHc------cCHhHHHHHHHHHHHh------------------------c
Confidence 4566777777766555 6888888888873221 1233334455555542 2
Q ss_pred hhhcccCchhhhhhhcccccccccccchhhHHHHHHHHHhcCccccccccccccCCCCCcchhhhhhhhhhhhccCChhH
Q 037700 105 VTFTSIGSSFAILKVYNCMATFRAIKSSMTRLISVLMVLAKLPLYLYPFLNTKDKEKPHEYLRLTSLGVIGTLVKSDDPE 184 (309)
Q Consensus 105 ~~~~~~~~~~~~~~~~~cvAshp~~~~~eTR~~~~~Fl~A~iplYLyPfLntt~k~rp~EyLRLtSLGVIgaLvK~dd~e 184 (309)
.+ .+.+.|+++..|+..-+ +..+.+=...++++-.|++.+|+.
T Consensus 63 --------------------~~---~~~~vrk~~~~Fi~e~~--------------~~k~~l~~~~l~~L~~Ll~d~d~~ 105 (257)
T 3gs3_A 63 --------------------HD---SNMEVRKQVVAFVEQVC--------------KVKVELLPHVINVVSMLLRDNSAQ 105 (257)
T ss_dssp --------------------GC---SCHHHHHHHHHHHHHHH--------------HHCGGGHHHHHHHHHHHTTCSCHH
T ss_pred --------------------cC---ChHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHcCCCHH
Confidence 11 12388888888886554 223456677888999999999999
Q ss_pred HHHHHhhcc--ccccccccccccch
Q 037700 185 AIRFLLQTE--IFPCCLTSMEVGSD 207 (309)
Q Consensus 185 vI~fLL~tE--iiPlCLriME~GSe 207 (309)
|++...++- +.|+.++-+-..+.
T Consensus 106 V~K~~I~~~~~iY~~~l~~i~~~~~ 130 (257)
T 3gs3_A 106 VIKRVIQACGSIYKNGLQYLCSLME 130 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999888754 88888887766654
No 53
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=20.55 E-value=67 Score=28.25 Aligned_cols=58 Identities=26% Similarity=0.318 Sum_probs=35.9
Q ss_pred CcchhhhhhhhhhhhccCChhHHHHHHhhcccccccccccccc--chhhHHHHHHHHHHHh
Q 037700 163 HEYLRLTSLGVIGTLVKSDDPEAIRFLLQTEIFPCCLTSMEVG--SDLSKQVATFIIYKIL 221 (309)
Q Consensus 163 ~EyLRLtSLGVIgaLvK~dd~evI~fLL~tEiiPlCLriME~G--SelSKtvAtfIlqKIL 221 (309)
.+..|...+.++|.+++.-.++...-.. ..++|.+++.++.. +.--+..|.-.+..++
T Consensus 143 ~~~~r~~al~~l~~l~~~~~~~~~~~~~-~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~ 202 (462)
T 1ibr_B 143 TEHMKESTLEAIGYICQDIDPEQLQDKS-NEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (462)
T ss_dssp CHHHHHHHHHHHHHHHHHSCGGGTGGGH-HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHhCCchhhHhHH-HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 4678999999999998743233211111 24778888888776 4445555655555543
Done!