Query 037701
Match_columns 358
No_of_seqs 247 out of 2879
Neff 11.3
Searched_HMMs 29240
Date Mon Mar 25 05:23:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037701.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037701hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 4.7E-56 1.6E-60 396.6 21.1 331 2-352 15-365 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 5.8E-55 2E-59 389.5 21.0 331 2-352 48-398 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 6.2E-48 2.1E-52 332.4 20.5 287 3-326 27-330 (337)
4 4g8k_A 2-5A-dependent ribonucl 100.0 7.6E-47 2.6E-51 325.6 16.6 287 29-353 21-323 (337)
5 1wdy_A 2-5A-dependent ribonucl 100.0 1.5E-46 5.2E-51 316.2 17.7 262 32-327 4-283 (285)
6 3utm_A Tankyrase-1; tankyrase, 100.0 2.3E-46 7.8E-51 324.6 17.5 289 3-337 26-320 (351)
7 1wdy_A 2-5A-dependent ribonucl 100.0 2.9E-45 1E-49 308.3 22.7 262 2-296 6-284 (285)
8 2fo1_E LIN-12 protein; beta-ba 100.0 8.8E-46 3E-50 322.6 14.2 263 29-322 90-371 (373)
9 2xai_A ASB-9, ankyrin repeat a 100.0 5E-44 1.7E-48 296.5 19.2 248 72-349 2-257 (261)
10 3d9h_A CDNA FLJ77766, highly s 100.0 5.4E-44 1.8E-48 299.9 16.7 263 29-325 11-282 (285)
11 3d9h_A CDNA FLJ77766, highly s 100.0 6.4E-44 2.2E-48 299.5 14.5 263 70-353 12-275 (285)
12 1yyh_A HN1;, notch 1, ankyrin 100.0 1.1E-42 3.6E-47 287.3 18.3 230 66-320 3-246 (253)
13 3ljn_A Hypothetical protein; a 100.0 1.7E-43 5.9E-48 307.9 13.5 259 63-350 10-308 (364)
14 2fo1_E LIN-12 protein; beta-ba 100.0 7.4E-43 2.5E-47 304.2 17.3 257 2-285 95-369 (373)
15 1oy3_D Transcription factor in 100.0 1.2E-42 4E-47 292.1 15.4 251 66-339 2-267 (282)
16 2xai_A ASB-9, ankyrin repeat a 100.0 1.3E-42 4.3E-47 288.1 14.7 247 32-313 2-253 (261)
17 3ljn_A Hypothetical protein; a 100.0 6.9E-44 2.4E-48 310.4 6.9 268 29-325 16-317 (364)
18 1yyh_A HN1;, notch 1, ankyrin 100.0 2E-41 6.7E-46 279.7 19.7 230 26-285 3-246 (253)
19 3utm_A Tankyrase-1; tankyrase, 100.0 4.2E-43 1.4E-47 304.1 9.6 282 26-353 17-302 (351)
20 1k1a_A B-cell lymphoma 3-encod 100.0 5.7E-42 2E-46 281.2 14.9 232 114-354 2-239 (241)
21 3b7b_A Euchromatic histone-lys 100.0 8.3E-41 2.8E-45 273.5 21.3 222 65-312 3-224 (237)
22 1k1a_A B-cell lymphoma 3-encod 100.0 1.4E-41 4.8E-46 278.9 15.7 233 67-321 3-240 (241)
23 3aji_A 26S proteasome non-ATPa 100.0 1.3E-40 4.3E-45 271.3 18.3 226 71-322 4-230 (231)
24 4b93_B Ankyrin repeat domain-c 100.0 9.4E-42 3.2E-46 283.0 11.1 238 68-323 6-245 (269)
25 3b7b_A Euchromatic histone-lys 100.0 1.5E-40 5.3E-45 271.9 16.9 220 114-345 4-224 (237)
26 1oy3_D Transcription factor in 100.0 8.3E-41 2.9E-45 280.8 15.5 255 26-310 2-270 (282)
27 3aji_A 26S proteasome non-ATPa 100.0 9.4E-40 3.2E-44 266.2 19.5 225 31-285 4-228 (231)
28 2dzn_A Probable 26S proteasome 100.0 3.1E-39 1.1E-43 262.5 18.3 210 73-307 2-217 (228)
29 3kea_A K1L; tropism, ANK repea 100.0 9.1E-40 3.1E-44 274.1 13.9 222 66-325 24-249 (285)
30 4b93_B Ankyrin repeat domain-c 100.0 9E-40 3.1E-44 271.1 11.7 208 3-240 13-230 (269)
31 2dzn_A Probable 26S proteasome 100.0 4E-38 1.4E-42 256.0 21.0 222 33-284 2-227 (228)
32 3kea_A K1L; tropism, ANK repea 100.0 2.4E-39 8.3E-44 271.5 14.1 245 8-296 6-252 (285)
33 3eu9_A Huntingtin-interacting 100.0 1.3E-38 4.5E-43 260.9 16.4 228 28-285 4-233 (240)
34 1s70_B 130 kDa myosin-binding 100.0 8.4E-40 2.9E-44 277.0 8.6 252 80-350 5-283 (299)
35 1s70_B 130 kDa myosin-binding 100.0 2E-39 6.7E-44 274.7 10.1 263 7-309 4-276 (299)
36 3eu9_A Huntingtin-interacting 100.0 2.1E-37 7.2E-42 253.7 20.9 233 66-325 2-238 (240)
37 1sw6_A Regulatory protein SWI6 100.0 2.3E-39 7.8E-44 277.0 7.7 275 30-339 20-325 (327)
38 1sw6_A Regulatory protein SWI6 100.0 1.5E-39 5.2E-44 278.1 6.1 268 4-309 22-327 (327)
39 2f8y_A Notch homolog 1, transl 100.0 3.1E-38 1.1E-42 255.7 13.4 214 84-322 2-216 (223)
40 2f8y_A Notch homolog 1, transl 100.0 5.3E-37 1.8E-41 248.5 19.0 192 70-285 22-214 (223)
41 1ikn_D Protein (I-kappa-B-alph 100.0 5.8E-37 2E-41 250.4 10.5 219 68-306 3-227 (236)
42 2rfa_A Transient receptor pote 100.0 2E-35 6.9E-40 240.7 17.7 191 72-285 2-220 (232)
43 1ikn_D Protein (I-kappa-B-alph 100.0 1E-36 3.6E-41 248.9 9.3 218 28-271 3-228 (236)
44 2rfa_A Transient receptor pote 100.0 3.3E-35 1.1E-39 239.4 17.4 199 120-329 2-229 (232)
45 3hra_A Ankyrin repeat family p 100.0 1.3E-34 4.6E-39 230.5 20.1 194 71-285 3-201 (201)
46 2pnn_A Transient receptor pote 100.0 1E-34 3.5E-39 242.4 17.3 211 27-252 7-257 (273)
47 3hra_A Ankyrin repeat family p 100.0 2.9E-34 9.8E-39 228.6 18.8 192 119-320 3-201 (201)
48 2etb_A Transient receptor pote 100.0 1.4E-34 4.8E-39 239.2 15.4 219 32-285 1-244 (256)
49 2pnn_A Transient receptor pote 100.0 6.2E-35 2.1E-39 243.7 10.8 210 64-285 4-256 (273)
50 2etb_A Transient receptor pote 100.0 1.8E-34 6.2E-39 238.6 13.3 198 121-329 2-253 (256)
51 4gpm_A Engineered protein OR26 100.0 2.3E-33 8E-38 215.2 15.3 158 123-292 6-163 (169)
52 4gpm_A Engineered protein OR26 100.0 1.4E-32 4.9E-37 210.8 18.9 159 159-326 6-165 (169)
53 3jxi_A Vanilloid receptor-rela 100.0 4.4E-33 1.5E-37 230.8 14.7 211 30-251 2-248 (260)
54 3jxi_A Vanilloid receptor-rela 100.0 1.6E-32 5.6E-37 227.4 12.4 197 118-325 2-253 (260)
55 4hbd_A KN motif and ankyrin re 100.0 2.6E-31 8.8E-36 221.5 16.5 193 72-285 75-273 (276)
56 2rfm_A Putative ankyrin repeat 100.0 7.1E-31 2.4E-35 207.2 16.7 163 65-250 27-189 (192)
57 2aja_A Ankyrin repeat family p 100.0 1.3E-34 4.3E-39 249.7 -5.3 271 33-353 65-371 (376)
58 2vge_A RELA-associated inhibit 100.0 2.9E-33 9.8E-38 226.4 1.7 200 140-351 1-208 (229)
59 3v30_A DNA-binding protein rfx 100.0 2.6E-31 9E-36 205.9 11.8 169 121-301 2-171 (172)
60 2rfm_A Putative ankyrin repeat 100.0 2.7E-30 9.3E-35 203.9 17.3 163 114-285 28-190 (192)
61 4hbd_A KN motif and ankyrin re 100.0 6E-31 2.1E-35 219.3 14.1 198 30-252 73-274 (276)
62 1ihb_A P18-INK4C(INK6), cyclin 100.0 5.6E-30 1.9E-34 196.4 16.6 157 120-285 4-160 (162)
63 3v30_A DNA-binding protein rfx 100.0 5.7E-30 2E-34 198.4 16.5 169 157-333 2-171 (172)
64 3v31_A Ankyrin repeat family A 100.0 1.8E-29 6E-34 194.6 17.1 157 72-251 2-158 (167)
65 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.5E-29 1.6E-33 192.6 18.8 161 116-285 9-169 (169)
66 2aja_A Ankyrin repeat family p 100.0 3.3E-33 1.1E-37 240.8 -5.7 266 5-313 69-364 (376)
67 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.1E-30 1.4E-34 197.2 11.7 156 74-252 6-161 (162)
68 2vge_A RELA-associated inhibit 100.0 1.9E-32 6.5E-37 221.6 -1.7 200 89-313 1-203 (229)
69 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.2E-29 7.5E-34 194.4 15.4 160 69-251 10-169 (169)
70 3v31_A Ankyrin repeat family A 100.0 4.9E-29 1.7E-33 192.1 16.9 158 120-286 2-159 (167)
71 3f6q_A Integrin-linked protein 100.0 5.7E-30 2E-34 199.6 8.1 167 119-297 3-170 (179)
72 1awc_B Protein (GA binding pro 100.0 1.7E-28 5.8E-33 186.1 15.7 149 123-281 4-152 (153)
73 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.4E-30 4.8E-35 212.6 4.0 207 119-339 3-227 (239)
74 1awc_B Protein (GA binding pro 100.0 6.6E-28 2.3E-32 182.9 17.7 150 157-316 2-152 (153)
75 3twr_A Tankyrase-2; ankyrin re 100.0 2.5E-29 8.6E-34 193.3 9.2 159 117-285 4-163 (165)
76 3f6q_A Integrin-linked protein 100.0 3.7E-28 1.3E-32 189.3 15.9 168 155-330 3-171 (179)
77 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.5E-27 5.1E-32 181.6 17.3 153 121-284 2-155 (156)
78 1bd8_A P19INK4D CDK4/6 inhibit 100.0 4.4E-28 1.5E-32 184.6 14.1 153 73-250 2-155 (156)
79 3twr_A Tankyrase-2; ankyrin re 100.0 6.8E-28 2.3E-32 185.3 14.4 160 153-321 4-164 (165)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1E-28 3.6E-33 201.5 6.7 175 155-339 3-190 (239)
81 1bi7_B P16INK4A, MTS1, multipl 99.9 5.9E-27 2E-31 178.1 8.0 139 188-335 9-149 (156)
82 3t8k_A Uncharacterized protein 99.9 2.6E-27 8.7E-32 184.7 5.7 158 3-180 8-177 (186)
83 1d9s_A Cyclin-dependent kinase 99.9 2E-26 6.9E-31 170.9 9.6 126 117-251 8-134 (136)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 5.5E-26 1.9E-30 172.8 10.8 143 153-305 8-151 (156)
85 1d9s_A Cyclin-dependent kinase 99.9 1.1E-25 3.8E-30 166.9 11.2 132 147-285 2-134 (136)
86 3t8k_A Uncharacterized protein 99.9 7.4E-26 2.5E-30 176.4 9.0 153 73-250 6-176 (186)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.1E-24 7.3E-29 157.9 13.9 123 73-214 2-124 (126)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 1.1E-24 3.9E-29 161.5 11.1 127 117-251 10-136 (136)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 7.2E-24 2.5E-28 157.1 14.3 126 154-285 11-136 (136)
90 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.8E-23 6.1E-28 152.9 16.1 124 121-252 2-125 (126)
91 3deo_A Signal recognition part 99.9 1.6E-25 5.6E-30 174.9 4.3 139 71-250 42-181 (183)
92 3ui2_A Signal recognition part 99.9 7.6E-25 2.6E-29 179.0 7.7 170 31-251 13-183 (244)
93 3ui2_A Signal recognition part 99.9 4.7E-25 1.6E-29 180.2 3.7 172 71-286 13-184 (244)
94 3c5r_A BARD-1, BRCA1-associate 99.9 7.3E-24 2.5E-28 157.3 8.0 115 154-274 7-121 (137)
95 3deo_A Signal recognition part 99.9 3.9E-23 1.3E-27 161.3 11.2 142 117-285 40-182 (183)
96 3c5r_A BARD-1, BRCA1-associate 99.9 3.2E-23 1.1E-27 153.9 8.7 128 116-251 5-132 (137)
97 3ehr_A Osteoclast-stimulating 99.9 1.3E-23 4.4E-28 169.5 6.8 136 188-330 70-206 (222)
98 2b0o_E UPLC1; arfgap, structur 99.9 2.2E-22 7.5E-27 169.1 11.9 144 154-311 148-299 (301)
99 2b0o_E UPLC1; arfgap, structur 99.9 1.6E-22 5.6E-27 169.9 10.9 138 188-339 148-295 (301)
100 3aaa_C Myotrophin, protein V-1 99.9 5.7E-23 1.9E-27 149.5 6.8 109 120-236 6-114 (123)
101 3ehr_A Osteoclast-stimulating 99.9 2.6E-22 9E-27 161.8 10.3 132 115-254 67-199 (222)
102 3aaa_C Myotrophin, protein V-1 99.9 4.3E-22 1.5E-26 144.8 9.9 115 154-274 4-118 (123)
103 3jue_A Arfgap with coiled-coil 99.9 9.7E-22 3.3E-26 168.8 12.6 165 154-324 196-366 (368)
104 1dcq_A PYK2-associated protein 99.9 1.2E-21 4E-26 162.8 10.2 205 117-339 62-272 (278)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7.4E-21 2.5E-25 130.8 9.1 90 73-180 2-91 (93)
106 2l6b_A NR1C; ankyrin, consensu 99.8 2.6E-21 8.9E-26 138.8 6.6 106 224-333 5-111 (115)
107 1dcq_A PYK2-associated protein 99.8 7.2E-20 2.5E-24 152.0 15.9 125 157-286 130-262 (278)
108 3lvq_E ARF-GAP with SH3 domain 99.8 1E-20 3.5E-25 170.4 11.5 134 73-216 132-265 (497)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.8 9.2E-20 3.2E-24 125.3 12.1 91 121-215 2-92 (93)
110 3lvq_E ARF-GAP with SH3 domain 99.8 1.2E-19 4E-24 163.6 15.2 135 122-271 133-276 (497)
111 3jue_A Arfgap with coiled-coil 99.8 9.8E-20 3.4E-24 156.3 14.0 148 117-272 195-347 (368)
112 2l6b_A NR1C; ankyrin, consensu 99.8 4.6E-20 1.6E-24 132.3 8.8 109 186-302 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 5.1E-18 1.7E-22 120.3 6.7 90 117-210 20-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 6.8E-17 2.3E-21 114.5 10.3 92 151-247 18-109 (110)
115 1gp8_A Protein (scaffolding pr 56.7 1.7 5.7E-05 22.6 -0.5 18 4-21 16-33 (40)
116 3gvo_A Pumilio 2, pumilio homo 22.4 53 0.0018 27.4 2.8 28 186-213 212-239 (351)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.7e-56 Score=396.57 Aligned_cols=331 Identities=22% Similarity=0.286 Sum_probs=224.1
Q ss_pred ChhhhcccccCCchhhhhhhhhh-ccceeccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHH
Q 037701 2 NPDLYRDAAKGEIEPFNEIAKDE-LVSIATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVA 80 (358)
Q Consensus 2 ~~~L~~A~~~g~~~~~~~ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A 80 (358)
.|+||+||..|+.++|++|++.+ +++..+..|.||||+|+..|+ .+++++|++ .+.+++.++..|.||||+|
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~---~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A 87 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGH---TEVAKYLLQ----NKAKVNAKAKDDQTPLHCA 87 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTC---HHHHHHHHH----HTCCSSCCCTTSCCHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC---HHHHHHHHh----CCCCCCCCCCCCCCHHHHH
Confidence 37899999999999999999987 567788899999999999999 888888887 3677888899999999999
Q ss_pred HhcCCcHHHHHHHHHHHhhhHhhhcc------------hhHHHHHHH------hhcccCCcHHHHHHHHHhCCcHHHHHH
Q 037701 81 AKCRHPAVVEVLIKFAKKQSRELESG------------VDWIRWMLL------VENEEKNTALHEAVQSAAKGSVEMVAE 142 (358)
Q Consensus 81 ~~~~~~~~v~~Ll~~~~~~~~~~~~~------------~~~~~~~~~------~~~~~~~t~l~~a~~~~~~~~~~~~~~ 142 (358)
+..|+.++|++|+++|++++.....+ .+.+.+++. ..+..|.||||+|+.. ++.+++++
T Consensus 88 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~---g~~~~v~~ 164 (437)
T 1n11_A 88 ARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKY---GKVRVAEL 164 (437)
T ss_dssp HHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHT---TCHHHHHH
T ss_pred HHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHc---CCHHHHHH
Confidence 99999999999999988765332222 222333332 2345677777777554 77777777
Q ss_pred HHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCccccccc
Q 037701 143 ILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALY 222 (358)
Q Consensus 143 Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 222 (358)
|++.|++++..+..|.||||+|+..++.+++++|++.++. ....+..|.||||+|+..|+.+++++|++.+.+ ++
T Consensus 165 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~ 239 (437)
T 1n11_A 165 LLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS-PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS----AN 239 (437)
T ss_dssp HHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TT
T ss_pred HHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CC
Confidence 7777777777777777777777777777777777776665 344555666666666666666666666666543 44
Q ss_pred ccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHH
Q 037701 223 KEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPL 302 (358)
Q Consensus 223 ~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL 302 (358)
..+..|.||||+|+..|+.+++++|++.+++. +..+..|.||||+|+..++.+++++|+++| ++++.++..|+|||
T Consensus 240 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L 315 (437)
T 1n11_A 240 AESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVLIKHG---VMVDATTRMGYTPL 315 (437)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHHT---CCTTCCCSSCCCHH
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCC---ccCCCCCCCCCCHH
Confidence 45555666666666666666666666554442 445555555555555555555555555555 55555555555555
Q ss_pred HHHHHhCCCCc-eeecCCcchHHHHhhCCCchhhHhhhCCCCcccccceee
Q 037701 303 HVLAAACRDSS-YFIVPDSDMYEAVNKQNTSVEHIVRYGYPELEVIPSLLI 352 (358)
Q Consensus 303 ~~a~~~~~~~~-~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~ 352 (358)
|+|+..++..+ ++|++.|+|++.+|..|.||||+|+.. ++.+++++|+.
T Consensus 316 ~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~-g~~~iv~~Ll~ 365 (437)
T 1n11_A 316 HVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQ-GHTDIVTLLLK 365 (437)
T ss_dssp HHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHC-ChHHHHHHHHH
Confidence 55555555555 555555555555555555555555552 55555555553
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.8e-55 Score=389.51 Aligned_cols=331 Identities=23% Similarity=0.259 Sum_probs=294.3
Q ss_pred ChhhhcccccCCchhhhhhhhhh-ccceeccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHH
Q 037701 2 NPDLYRDAAKGEIEPFNEIAKDE-LVSIATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVA 80 (358)
Q Consensus 2 ~~~L~~A~~~g~~~~~~~ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A 80 (358)
.|+||.|+..|+.+++++|++.+ .++..+..|.||||+|+..|+ .+++++|++. +.+++..+..|.||||+|
T Consensus 48 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~---~~~v~~Ll~~----ga~~~~~~~~g~t~L~~A 120 (437)
T 1n11_A 48 ETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGH---TNMVKLLLEN----NANPNLATTAGHTPLHIA 120 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTC---HHHHHHHHHH----TCCTTCCCTTCCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCC---HHHHHHHHhC----CCCCCCCCCCCCcHHHHH
Confidence 47999999999999999999987 567788999999999999999 8888888773 677888888999999999
Q ss_pred HhcCCcHHHHHHHHHHHhhhHhhhcc------------hhHHHHHH------HhhcccCCcHHHHHHHHHhCCcHHHHHH
Q 037701 81 AKCRHPAVVEVLIKFAKKQSRELESG------------VDWIRWML------LVENEEKNTALHEAVQSAAKGSVEMVAE 142 (358)
Q Consensus 81 ~~~~~~~~v~~Ll~~~~~~~~~~~~~------------~~~~~~~~------~~~~~~~~t~l~~a~~~~~~~~~~~~~~ 142 (358)
+..|+.+++++|++++++.......+ .+.+++++ +..+..|.||||+|+.. ++.+++++
T Consensus 121 ~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~ 197 (437)
T 1n11_A 121 AREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHH---NNLDIVKL 197 (437)
T ss_dssp HHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHT---TCHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc---CCHHHHHH
Confidence 99999999999998877643322222 22334443 34567899999999765 99999999
Q ss_pred HHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCccccccc
Q 037701 143 ILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALY 222 (358)
Q Consensus 143 Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 222 (358)
|++.|.+++..+..|.||||+|+..++.+++++|++.+.. .+..+..|.||||+|+..|+.+++++|++.+++ ++
T Consensus 198 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~----~~ 272 (437)
T 1n11_A 198 LLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS-ANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN----GN 272 (437)
T ss_dssp HGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC----TT
T ss_pred HHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC----CC
Confidence 9999999999999999999999999999999999999987 567889999999999999999999999999855 67
Q ss_pred ccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHH
Q 037701 223 KEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPL 302 (358)
Q Consensus 223 ~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL 302 (358)
..+..|.||||+|+..|+.+++++|++++.+ ++.++..|.||||+|+..|+.+++++|+++| ++++.+|..|+|||
T Consensus 273 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---ad~n~~~~~g~t~L 348 (437)
T 1n11_A 273 LGNKSGLTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQHQ---ADVNAKTKLGYSPL 348 (437)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT---CCTTCCCTTSCCHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhCCcc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcC---CCCCCCCCCCCCHH
Confidence 7889999999999999999999999999776 5889999999999999999999999999998 89999999999999
Q ss_pred HHHHHhCCCCc-eeecCCcchHHHHhhCCCchhhHhhhCCCCcccccceee
Q 037701 303 HVLAAACRDSS-YFIVPDSDMYEAVNKQNTSVEHIVRYGYPELEVIPSLLI 352 (358)
Q Consensus 303 ~~a~~~~~~~~-~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~ 352 (358)
|+|++.++..+ ++|++.|++++.+|..|+||+++|... +..+++++|..
T Consensus 349 ~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~-g~~~~~~~l~~ 398 (437)
T 1n11_A 349 HQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRL-GYISVTDVLKV 398 (437)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHT-TCHHHHHHHHH
T ss_pred HHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc-CcHHHHHHHHh
Confidence 99999999999 999999999999999999999999884 88888887743
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=6.2e-48 Score=332.37 Aligned_cols=287 Identities=17% Similarity=0.153 Sum_probs=202.6
Q ss_pred hhhhcccccCCchhhhhhhhhh-ccceecc-CCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHH
Q 037701 3 PDLYRDAAKGEIEPFNEIAKDE-LVSIATH-EKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVA 80 (358)
Q Consensus 3 ~~L~~A~~~g~~~~~~~ll~~~-~~~~~~~-~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A 80 (358)
++|+.||++|++++|++||+.| +++.++. .|.||||+|+..|+ .+++++|++ .++.++.++..+.+|++.+
T Consensus 27 t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~---~~iv~~Ll~----~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 27 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSR---EDIVELLLR----HGADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTC---HHHHHHHHH----TTCCTTCCCTTCCCHHHHH
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCC---HHHHHHHHH----cCCchhhhccCCCchhHHH
Confidence 5677777777777777777776 4444443 47777777777777 777777766 4667777777777777777
Q ss_pred HhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCC-------
Q 037701 81 AKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHR------- 153 (358)
Q Consensus 81 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~------- 153 (358)
+..+...++..+++.+++ ++..+..|.||+|+|+.. ++.+++++|++.|++++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~---------------~~~~d~~g~t~l~~A~~~---~~~~~~~~ll~~ga~~~~~~~~~~~~ 161 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGAD---------------VNECDFYGFTAFMEAAVY---GKVKALKFLYKRGANVNLRRKTKEDQ 161 (337)
T ss_dssp HHHTCHHHHHHHHTTTCC---------------TTCBCTTCCBHHHHHHHT---TCHHHHHHHHHTTCCTTCCCCCC---
T ss_pred HhcccchhhHHhhhccch---------------hhhhccCCCCHHHHHHHc---CcHHHHHHHHHcCCCcchhhcccccc
Confidence 777777777777777666 445677777777777554 7777777777777766543
Q ss_pred ---CCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCC----HHHHHHHhcCCCcccccccccCC
Q 037701 154 ---GPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGH----SNITSMMLKSEDDKIVALYKEDD 226 (358)
Q Consensus 154 ---~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~~~ 226 (358)
+..|.||||+|+..|+.+++++|+++.+...+.++..|.|+++.++..+. ..++++|++.|++ ++.++.
T Consensus 162 ~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad----~n~~d~ 237 (337)
T 4g8k_A 162 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD----VNVRGE 237 (337)
T ss_dssp --CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC----TTCCCG
T ss_pred ccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC----CCCcCC
Confidence 33467777777777777777777765333356677777777776665443 2466777777744 666677
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHH
Q 037701 227 RGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLA 306 (358)
Q Consensus 227 ~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~ 306 (358)
.|.||||+|+..|+.++++.|++....+++.+|..|+||||+|+..|+.+++++|+++| +++|. .+|||+|+
T Consensus 238 ~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G---Ad~n~-----~~~L~~A~ 309 (337)
T 4g8k_A 238 RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG---ASTDC-----GDLVMTAR 309 (337)
T ss_dssp GGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTS---CSSTT-----CCHHHHHH
T ss_pred CCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCC-----CCHHHHHH
Confidence 77777777777777777777777655556777777777777777777777777777777 55543 35777777
Q ss_pred HhCCCCc-eeecCCcchHHHH
Q 037701 307 AACRDSS-YFIVPDSDMYEAV 326 (358)
Q Consensus 307 ~~~~~~~-~~Ll~~g~~~~~~ 326 (358)
+.++..+ ++|+++||++|..
T Consensus 310 ~~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 310 RNYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp HTTCHHHHHHHHHTTCCC---
T ss_pred HcCCHHHHHHHHHCcCCCCCC
Confidence 7777777 7777777777653
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=7.6e-47 Score=325.57 Aligned_cols=287 Identities=19% Similarity=0.221 Sum_probs=253.5
Q ss_pred eccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccC-CCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcch
Q 037701 29 ATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVND-KGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGV 107 (358)
Q Consensus 29 ~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 107 (358)
.+.+|.|+||.|++.|+ .++|++|++ .+++++.++. .|.||||+|+..|+.++|++|+++|++
T Consensus 21 ~~~~~~t~L~~Av~~g~---~~~V~~LL~----~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~--------- 84 (337)
T 4g8k_A 21 AAVEDNHLLIKAVQNED---VDLVQQLLE----GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD--------- 84 (337)
T ss_dssp CHHHHHHHHHHHHHTTC---HHHHHHHHH----HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---------
T ss_pred CCCCCChHHHHHHHcCC---HHHHHHHHH----CCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc---------
Confidence 34568899999999999 888988887 3778887765 599999999999999999999999998
Q ss_pred hHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCccc---
Q 037701 108 DWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILT--- 184 (358)
Q Consensus 108 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~--- 184 (358)
++..+..+.++++.++.. +....+..+++.+.+++..+..|.||+|+|+..++.++++++++.|++..
T Consensus 85 ------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~ 155 (337)
T 4g8k_A 85 ------PVLRKKNGATPFILAAIA---GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRR 155 (337)
T ss_dssp ------TTCCCTTCCCHHHHHHHH---TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred ------hhhhccCCCchhHHHHhc---ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhh
Confidence 446889999999999776 99999999999999999999999999999999999999999999987642
Q ss_pred ------ccccCCCCCHHHHHHHcCCHHHHHHHhc-CCCcccccccccCCCCCCHHHHHHHcCc----HHHHHHHHhhCCC
Q 037701 185 ------RERDRHGWTSLHHAAYLGHSNITSMMLK-SEDDKIVALYKEDDRGMTALHLAASQGY----ERVVRRIIRHCPE 253 (358)
Q Consensus 185 ------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~g~t~l~~a~~~~~----~~~v~~Ll~~~~~ 253 (358)
...+..|.||||+|+..|+.+++++|++ .| .+++..+..|.||++.++..+. ..++++|++.+++
T Consensus 156 ~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~g----ad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad 231 (337)
T 4g8k_A 156 KTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG----ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD 231 (337)
T ss_dssp CCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSC----CCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC
T ss_pred ccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccC----CCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC
Confidence 1245678999999999999999999996 46 4478889999999998876543 4688999999876
Q ss_pred CcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeecCCcchHHHHhhCCCc
Q 037701 254 SYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVPDSDMYEAVNKQNTS 332 (358)
Q Consensus 254 ~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~~~~~~~~g~t 332 (358)
++.++..|+||||+|+..++.++++.|++.. +++++.+|..|+||||+|++.|+..+ ++|+++|+|++ +.+
T Consensus 232 -~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~--~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n-----~~~ 303 (337)
T 4g8k_A 232 -VNVRGERGKTPLILAVEKKHLGLVQRLLEQE--HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD-----CGD 303 (337)
T ss_dssp -TTCCCGGGCCHHHHHHHTTCHHHHHHHHTST--TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST-----TCC
T ss_pred -CCCcCCCCCCHHHHHHHhhhhHHHHHHHHhc--CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-----CCC
Confidence 5889999999999999999999999999863 27899999999999999999999999 99999999886 457
Q ss_pred hhhHhhhCCCCcccccceeee
Q 037701 333 VEHIVRYGYPELEVIPSLLII 353 (358)
Q Consensus 333 ~l~~a~~~~~~~~~~~~L~~~ 353 (358)
||++|+.. ++.++|++|+..
T Consensus 304 ~L~~A~~~-~~~~iv~~Ll~~ 323 (337)
T 4g8k_A 304 LVMTARRN-YDHSLVKVLLSH 323 (337)
T ss_dssp HHHHHHHT-TCHHHHHHHHHT
T ss_pred HHHHHHHc-CCHHHHHHHHHC
Confidence 99999985 999999999864
No 5
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-46 Score=316.18 Aligned_cols=262 Identities=19% Similarity=0.243 Sum_probs=182.1
Q ss_pred CCCceehhhhccccccccchHHHHHHHHhhCccchhcc-cCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHH
Q 037701 32 EKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQV-NDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWI 110 (358)
Q Consensus 32 ~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 110 (358)
+|.||||.|+..|+ .+++++|++ .+.+++.. +..|.||||+|+..|+.+++++|+++|++
T Consensus 4 ~g~~~L~~A~~~g~---~~~v~~Ll~----~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------ 64 (285)
T 1wdy_A 4 EDNHLLIKAVQNED---VDLVQQLLE----GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD------------ 64 (285)
T ss_dssp HHHHHHHHHHHTTC---HHHHHHHHH----TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred ccchHHHHHHHcCC---HHHHHHHHH----cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 45677777777777 666666554 24445544 56677777777777777777777777666
Q ss_pred HHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccc---
Q 037701 111 RWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRER--- 187 (358)
Q Consensus 111 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~--- 187 (358)
++..+..|.||||+|+.. ++.+++++|++.|++++..+..|.||||+|+..++.+++++|++.+.+.. ..
T Consensus 65 ---~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~ 137 (285)
T 1wdy_A 65 ---PVLRKKNGATPFLLAAIA---GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVN-LRRKT 137 (285)
T ss_dssp ---TTCCCTTCCCHHHHHHHH---TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCC
T ss_pred ---CcccCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcc-ccccc
Confidence 334566777777777665 77777777777777777777777777777777777777777777766532 22
Q ss_pred -------cCCCCCHHHHHHHcCCHHHHHHHhcC-CCcccccccccCCCCCCHHHHHHHcCc----HHHHHHHHhhCCCCc
Q 037701 188 -------DRHGWTSLHHAAYLGHSNITSMMLKS-EDDKIVALYKEDDRGMTALHLAASQGY----ERVVRRIIRHCPESY 255 (358)
Q Consensus 188 -------~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~g~t~l~~a~~~~~----~~~v~~Ll~~~~~~~ 255 (358)
+..|.||||+|+..|+.+++++|++. +. +++..+..|.||||+|+..++ .+++++|++.+.+ +
T Consensus 138 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~----~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~-~ 212 (285)
T 1wdy_A 138 KEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGA----DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-V 212 (285)
T ss_dssp CHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCC----CTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC-S
T ss_pred HHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCC----CCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC-C
Confidence 55677777777777777777777765 53 356666777777777777776 6777777777655 3
Q ss_pred ccccCCCCcHHHHHHHcCChhHHHHHhc-CccccccccCCCCCCChHHHHHHHhCCCCc-eeecCCcchHHHHh
Q 037701 256 SIVDNRGWNARHFAMVSLRGGVLKSLLE-NPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVPDSDMYEAVN 327 (358)
Q Consensus 256 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~~~~~~ 327 (358)
+.++..|.||||+|+..++.+++++|++ .+ ++++.+|..|.||||+|++.++.++ ++|++.|++++.+|
T Consensus 213 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g---~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 213 NVRGERGKTPLILAVEKKHLGLVQRLLEQEH---IEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp SCCCTTSCCHHHHHHHTTCHHHHHHHHHSSS---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred CCcCCCCCcHHHHHHHcCCHHHHHHHHhccC---CCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence 6677777777777777777777777777 55 6677777777777777777777776 77777777766554
No 6
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.3e-46 Score=324.59 Aligned_cols=289 Identities=19% Similarity=0.159 Sum_probs=209.9
Q ss_pred hhhhcccccCCchhhhhhhhhh--ccceeccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHH
Q 037701 3 PDLYRDAAKGEIEPFNEIAKDE--LVSIATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVA 80 (358)
Q Consensus 3 ~~L~~A~~~g~~~~~~~ll~~~--~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A 80 (358)
++|+.||+.|+.+.++.++... .++..+..|.||||+|+..|+ .+++++|++ .+.+++.+|..|.||||+|
T Consensus 26 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~---~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A 98 (351)
T 3utm_A 26 DELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNR---VRIVQLLLQ----HGADVHAKDKGGLVPLHNA 98 (351)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTC---HHHHHHHHH----TTCCTTCCCTTCCCHHHHH
T ss_pred hhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCC---HHHHHHHHH----cCCCCCccCCCCCcHHHHH
Confidence 5788888888888888888764 345577788888888888888 777777766 4677788888888888888
Q ss_pred HhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccH
Q 037701 81 AKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTT 160 (358)
Q Consensus 81 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~ 160 (358)
+..|+.+++++|+++|++ ++..+..|.||||+|+.. ++.+++++|+++|++++..+..|.+|
T Consensus 99 ~~~g~~~iv~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~~~ 160 (351)
T 3utm_A 99 CSYGHYEVTELLLKHGAC---------------VNAMDLWQFTPLHEAASK---NRVEVCSLLLSHGADPTLVNCHGKSA 160 (351)
T ss_dssp HHTTCHHHHHHHHHTTCC---------------TTCCCTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHCCCHHHHHHHHHCCCC---------------CCCCCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCccccCCCCcc
Confidence 888888888888888776 345677788888888654 88888888888888888888888888
Q ss_pred HHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHc--
Q 037701 161 LHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQ-- 238 (358)
Q Consensus 161 l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~-- 238 (358)
+++|+..+..+.+.+.... +++..++..+..+.++.++..... ....+..|.||||+|+..
T Consensus 161 l~~a~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~t~L~~A~~~~~ 223 (351)
T 3utm_A 161 VDMAPTPELRERLTYEFKG-------------HSLLQAAREADLAKVKKTLALEII----NFKQPQSHETALHCAVASLH 223 (351)
T ss_dssp HHHCSSHHHHHHHHHHHHH-------------HHHHHHHHTTCHHHHHHHTTTCCT----TCCCTTTCCCHHHHHHHCCS
T ss_pred hHHHhhhhhHHHHHhhhcc-------------cHHHHHHHhccHHHHHHHHHhhcc----cccCCCCCCCHHHHHHHHhC
Confidence 8877666655555554321 234555666666666666655421 223455667777777776
Q ss_pred -CcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eee
Q 037701 239 -GYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFI 316 (358)
Q Consensus 239 -~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~L 316 (358)
+..+++++|++.+.+ ++.++..|.||||+|+..++.+++++|+++| ++++.+|..|+||||+|+..++..+ ++|
T Consensus 224 ~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---a~~n~~d~~g~t~L~~A~~~~~~~~v~~L 299 (351)
T 3utm_A 224 PKRKQVAELLLRKGAN-VNEKNKDFMTPLHVAAERAHNDVMEVLHKHG---AKMNALDSLGQTALHRAALAGHLQTCRLL 299 (351)
T ss_dssp TTHHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ccHHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 456777777777655 3666777777777777777777777777776 6777777777777777777777766 777
Q ss_pred cCCcchHHHHhhCCCchhhHh
Q 037701 317 VPDSDMYEAVNKQNTSVEHIV 337 (358)
Q Consensus 317 l~~g~~~~~~~~~g~t~l~~a 337 (358)
++.|+|++.+|..|+||+++|
T Consensus 300 l~~gad~~~~~~~g~tal~~a 320 (351)
T 3utm_A 300 LSYGSDPSIISLQGFTAAQMG 320 (351)
T ss_dssp HHTTCCTTCCCTTSCCHHHHS
T ss_pred HHcCCCCCCcCCCCCChhhhh
Confidence 777777777777777777776
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.9e-45 Score=308.35 Aligned_cols=262 Identities=19% Similarity=0.185 Sum_probs=238.2
Q ss_pred ChhhhcccccCCchhhhhhhhhh-cccee-ccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHH
Q 037701 2 NPDLYRDAAKGEIEPFNEIAKDE-LVSIA-THEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHV 79 (358)
Q Consensus 2 ~~~L~~A~~~g~~~~~~~ll~~~-~~~~~-~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~ 79 (358)
+++|+.|++.|+.+++++|++.+ .++.. +..|.||||+|+..|+ .+++++|++ .+.+++..+..|.||||+
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~---~~~v~~Ll~----~g~~~~~~~~~g~t~L~~ 78 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSR---EDIVELLLR----HGADPVLRKKNGATPFLL 78 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC---HHHHHHHHH----TTCCTTCCCTTCCCHHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCC---HHHHHHHHH----cCCCCcccCCCCCCHHHH
Confidence 47899999999999999999998 45554 7889999999999999 899998887 577888999999999999
Q ss_pred HHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCC------
Q 037701 80 AAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHR------ 153 (358)
Q Consensus 80 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~------ 153 (358)
|+..|+.+++++|+++|++ ++..+..|.||||+|+.. ++.+++++|++.|++++..
T Consensus 79 A~~~~~~~~v~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~~~~ 140 (285)
T 1wdy_A 79 AAIAGSVKLLKLFLSKGAD---------------VNECDFYGFTAFMEAAVY---GKVKALKFLYKRGANVNLRRKTKED 140 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCC---------------TTCBCTTCCBHHHHHHHT---TCHHHHHHHHHTTCCTTCCCCCCHH
T ss_pred HHHcCCHHHHHHHHHcCCC---------------CCccCcccCCHHHHHHHh---CCHHHHHHHHHhCCCcccccccHHH
Confidence 9999999999999999987 446788999999999765 9999999999999999887
Q ss_pred ----CCCCccHHHHHHhcCcHHHHHHHHHh-CCcccccccCCCCCHHHHHHHcCC----HHHHHHHhcCCCccccccccc
Q 037701 154 ----GPDGLTTLHAAVICNAEDVIKLLLEK-KKILTRERDRHGWTSLHHAAYLGH----SNITSMMLKSEDDKIVALYKE 224 (358)
Q Consensus 154 ----~~~~~t~l~~a~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~ 224 (358)
+..|.||||+|+..++.+++++|++. +.+ .+..+..|.||||+|+..++ .+++++|++.|.+ ++.+
T Consensus 141 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~----~~~~ 215 (285)
T 1wdy_A 141 QERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD----VNVR 215 (285)
T ss_dssp HHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCC-TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC----SSCC
T ss_pred HHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCC-CCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC----CCCc
Confidence 77799999999999999999999998 555 67889999999999999999 8999999999954 7788
Q ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCC
Q 037701 225 DDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDK 296 (358)
Q Consensus 225 ~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 296 (358)
+..|.||||+|+..|+.+++++|++..+.+++.+|..|.||||+|+..++.+++++|+++| ++++.+|.
T Consensus 216 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~G---a~~~~~d~ 284 (285)
T 1wdy_A 216 GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG---ASTDCGDL 284 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS---SCSCCSSC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcC---CCCCcccc
Confidence 9999999999999999999999999555557899999999999999999999999999999 88877763
No 8
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=8.8e-46 Score=322.58 Aligned_cols=263 Identities=19% Similarity=0.133 Sum_probs=224.3
Q ss_pred eccCCCceehhhhccccccccchHHHHHHHHhhCccchhccc-CCCCchhHHHHhcCCcHHHHHHHH--------HHHhh
Q 037701 29 ATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVN-DKGDTPLHVAAKCRHPAVVEVLIK--------FAKKQ 99 (358)
Q Consensus 29 ~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~v~~Ll~--------~~~~~ 99 (358)
.+..|.||||+|+..+ .++++++. ...++..| ..|.||||+|+..|+.+++++|+. .|++
T Consensus 90 ~~~~g~t~L~~Aa~~~----~~~~~~L~------~~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~- 158 (373)
T 2fo1_E 90 PEPESPIKLHTEAAGS----YAITEPIT------RESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD- 158 (373)
T ss_dssp ----CCCHHHHHHHSS----SCCCSCCS------TTTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC-
T ss_pred CCCCCccHHHHHhcCC----chHHHHhc------cccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC-
Confidence 6888999999999954 45566653 24577777 789999999999999999998874 4544
Q ss_pred hHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHh
Q 037701 100 SRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEK 179 (358)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~ 179 (358)
++..|..|.||||+|+.. ++.+++++|++.|++++..+..|.||||+|+..++.+++++|++.
T Consensus 159 --------------vn~~d~~g~TpL~~A~~~---g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 221 (373)
T 2fo1_E 159 --------------VNAMDCDENTPLMLAVLA---RRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNS 221 (373)
T ss_dssp --------------TTCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTS
T ss_pred --------------CcCCCCCCCCHHHHHHHc---ChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhc
Confidence 557889999999999877 999999999999999999999999999999999999999999987
Q ss_pred CC--cccccccCCCCCHHHHHHHcC---CHHHHHHHhcCCCcccc----cccccCCCCCCHHHHHHHcCcHHHHHHHHhh
Q 037701 180 KK--ILTRERDRHGWTSLHHAAYLG---HSNITSMMLKSEDDKIV----ALYKEDDRGMTALHLAASQGYERVVRRIIRH 250 (358)
Q Consensus 180 ~~--~~~~~~~~~~~t~l~~a~~~~---~~~~~~~Ll~~~~~~~~----~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 250 (358)
+. ...+..+..|.||||+|+..+ +.+++++|++.|.+... ..+..+..|.||||+|+..|+.+++++|++.
T Consensus 222 ~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 301 (373)
T 2fo1_E 222 TKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE 301 (373)
T ss_dssp HHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH
T ss_pred CccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHh
Confidence 72 235678899999999999998 78999999999876322 1223577899999999999999999999998
Q ss_pred CCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeecCCcch
Q 037701 251 CPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVPDSDM 322 (358)
Q Consensus 251 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~ 322 (358)
++.+++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..++..+ ++|++.|++
T Consensus 302 ~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g---ad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 302 KGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG---ASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp SCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT---CCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred cCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 86667899999999999999999999999999998 8999999999999999999999999 999998875
No 9
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5e-44 Score=296.54 Aligned_cols=248 Identities=15% Similarity=0.157 Sum_probs=218.4
Q ss_pred CCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCC
Q 037701 72 KGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSAD 151 (358)
Q Consensus 72 ~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~ 151 (358)
+|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+.. ++.+++++|++.|++++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~ 63 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA---------------VNIITADHVSPLHEACLG---GHLSCVKILLKHGAQVN 63 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC---------------SSCCCTTCCCHHHHHHHH---TCHHHHHHHHHTTCCTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC---------------CCCcCCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCC
Confidence 589999999999999999999999887 446889999999999877 99999999999999999
Q ss_pred CCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCH
Q 037701 152 HRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTA 231 (358)
Q Consensus 152 ~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~ 231 (358)
..+..|.||||+|+..++.+++++|++.|++.. .+..|.||||+|+..|+.+++++|++.|.+ ++..+..|.||
T Consensus 64 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~ 137 (261)
T 2xai_A 64 GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGN----IDHKISHLGTP 137 (261)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCBTTTBCH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCC----CCcCCCCCCCH
Confidence 999999999999999999999999999998853 355699999999999999999999999854 77889999999
Q ss_pred HHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCC
Q 037701 232 LHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRD 311 (358)
Q Consensus 232 l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~ 311 (358)
||+|+..|+.+++++|++.+++. + .+..|.||||+|+..++.+++++|+++| ++++.+|..|+||||+|+..+.
T Consensus 138 L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g---ad~~~~d~~g~tpl~~A~~~~~- 211 (261)
T 2xai_A 138 LYLACENQQRACVKKLLESGADV-N-QGKGQDSPLHAVARTASEELACLLMDFG---ADTQAKNAEGKRPVELVPPESP- 211 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCT-T-CCBTTBCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCGGGGSCTTCT-
T ss_pred HHHHHHhCCHHHHHHHHHcCCCC-C-CCCCCCChHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCChhhhcccccc-
Confidence 99999999999999999998774 5 4889999999999999999999999998 8999999999999999995432
Q ss_pred CceeecCCcc--------hHHHHhhCCCchhhHhhhCCCCcccccc
Q 037701 312 SSYFIVPDSD--------MYEAVNKQNTSVEHIVRYGYPELEVIPS 349 (358)
Q Consensus 312 ~~~~Ll~~g~--------~~~~~~~~g~t~l~~a~~~~~~~~~~~~ 349 (358)
.+++|++.+. +++.+|..|.||++.+....-+..+.+|
T Consensus 212 ~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~~ 257 (261)
T 2xai_A 212 LAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQF 257 (261)
T ss_dssp HHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHHH
T ss_pred HHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHHHH
Confidence 2277776654 7889999999999999875333333333
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.4e-44 Score=299.92 Aligned_cols=263 Identities=14% Similarity=0.145 Sum_probs=196.4
Q ss_pred eccCCCceehhhhccccccccchHHHHHHHHhh-------CccchhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhH
Q 037701 29 ATHEKNTVLHVNIASQQEGERVSTEFVEGILEM-------CPSLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSR 101 (358)
Q Consensus 29 ~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~ 101 (358)
....|.|+||+|+..|+ .+.+..++..-.. -...++..|..|.||||+|+..|+.+++++|++.|++
T Consensus 11 ~~~~~~~~lH~Aa~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~--- 84 (285)
T 3d9h_A 11 SSGLVPRGSHMASMDGK---QGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA--- 84 (285)
T ss_dssp ----------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC---
T ss_pred cchHHHHHHHHHhhcCC---CCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC---
Confidence 45678999999999998 4444443221100 1223566888999999999999999999999999877
Q ss_pred hhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCC
Q 037701 102 ELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKK 181 (358)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~ 181 (358)
++..+..|.||||+|+.. ++.+++++|++.|++++..+..|.||||+|+..++.+++++|++.+.
T Consensus 85 ------------~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 149 (285)
T 3d9h_A 85 ------------VNIITADHVSPLHEACLG---GHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGA 149 (285)
T ss_dssp ------------SCEECTTCCCHHHHHHHT---TCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred ------------CCCcCCCCCCHHHHHHHC---CcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCC
Confidence 446888999999999765 99999999999999999999999999999999999999999999988
Q ss_pred cccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCC
Q 037701 182 ILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNR 261 (358)
Q Consensus 182 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~ 261 (358)
+.. .+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.+++. + .+..
T Consensus 150 ~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~-~~~~ 221 (285)
T 3d9h_A 150 SVQ--PESDLASPIHEAARRGHVECVNSLIAYGGN----IDHKISHLGTPLYLACENQQRACVKKLLESGADV-N-QGKG 221 (285)
T ss_dssp CSS--CSCTTSCHHHHHHHHTCHHHHHHHHHTTCC----TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCT-T-CCBT
T ss_pred CCC--CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCC-C-CCCC
Confidence 743 244589999999999999999999998854 7778889999999999999999999999998764 4 4788
Q ss_pred CCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeecCC-cchHHH
Q 037701 262 GWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVPD-SDMYEA 325 (358)
Q Consensus 262 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~-g~~~~~ 325 (358)
|.||||+|+..++.+++++|+++| ++++.+|..|+||||+|+. +..+ ++|++. |+++..
T Consensus 222 g~t~L~~A~~~~~~~~v~~Ll~~g---ad~~~~d~~g~t~l~~A~~--~~~~~~~Ll~~~~a~l~~ 282 (285)
T 3d9h_A 222 QDSPLHAVVRTASEELACLLMDFG---ADTQAKNAEGKRPVELVPP--ESPLAQLFLEREGASLPK 282 (285)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCGGGGSCT--TSHHHHHHHHHC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCCHHHHhcC--ccHHHHHHHHhhccCCCC
Confidence 999999999999999999999998 8899999999999999983 3444 666665 776543
No 11
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.4e-44 Score=299.48 Aligned_cols=263 Identities=15% Similarity=0.140 Sum_probs=205.3
Q ss_pred cCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCC
Q 037701 70 NDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPS 149 (358)
Q Consensus 70 ~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~ 149 (358)
...|.|+||+|+..|+.+.+..++..++........ ....+...+..|.||||+|+.. ++.+++++|++.|++
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~ 84 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRL----LSNPLMGDAVSDWSPMHEAAIH---GHQLSLRNLISQGWA 84 (285)
T ss_dssp ------------------------------CCSEEC----CCCTTCSSSCCSCCHHHHHHHT---TCHHHHHHHHHTTCC
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhh----hhCcccCCCccCCCHHHHHHHc---CCHHHHHHHHHCCCC
Confidence 356899999999999987777777665442110000 0000345788999999999765 999999999999999
Q ss_pred CCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCC
Q 037701 150 ADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGM 229 (358)
Q Consensus 150 ~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~ 229 (358)
++.++..|.||||+|+..|+.+++++|++.+++ .+.++..|.||||+|+..|+.+++++|++.+.+ ++. +..|.
T Consensus 85 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~-~~~g~ 158 (285)
T 3d9h_A 85 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQHGAS----VQP-ESDLA 158 (285)
T ss_dssp SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----SSC-SCTTS
T ss_pred CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCC----CCC-CCCCC
Confidence 999999999999999999999999999999887 677899999999999999999999999999865 332 34599
Q ss_pred CHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhC
Q 037701 230 TALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAAC 309 (358)
Q Consensus 230 t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~ 309 (358)
||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..++.+++++|+++| ++++. +..|.||||+|+..+
T Consensus 159 t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~-~~~g~t~L~~A~~~~ 233 (285)
T 3d9h_A 159 SPIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESG---ADVNQ-GKGQDSPLHAVVRTA 233 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTT---CCTTC-CBTTBCHHHHHHHTT
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCC---CCCCC-CCCCCCHHHHHHHcC
Confidence 999999999999999999999876 5889999999999999999999999999998 77774 889999999999999
Q ss_pred CCCc-eeecCCcchHHHHhhCCCchhhHhhhCCCCcccccceeee
Q 037701 310 RDSS-YFIVPDSDMYEAVNKQNTSVEHIVRYGYPELEVIPSLLII 353 (358)
Q Consensus 310 ~~~~-~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~ 353 (358)
+..+ ++|++.|+|++.+|..|+||+++|+ ++.+++++|+..
T Consensus 234 ~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~---~~~~~~~~Ll~~ 275 (285)
T 3d9h_A 234 SEELACLLMDFGADTQAKNAEGKRPVELVP---PESPLAQLFLER 275 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCGGGGSC---TTSHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCCHHHHhc---CccHHHHHHHHh
Confidence 9999 9999999999999999999999998 347889988865
No 12
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.1e-42 Score=287.30 Aligned_cols=230 Identities=23% Similarity=0.226 Sum_probs=174.9
Q ss_pred hhcccCCCCchhHHHHhcC-------------CcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHH
Q 037701 66 LLQVNDKGDTPLHVAAKCR-------------HPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSA 132 (358)
Q Consensus 66 ~~~~~~~g~t~Lh~A~~~~-------------~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~ 132 (358)
++.+|..|.||||+|+..| +.+++++|++.|++.. ...+..|.||||+|+..
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~--------------~~~d~~g~t~L~~A~~~- 67 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLH--------------NQTDRTGETALHLAARY- 67 (253)
T ss_dssp ---------------------------------------------------------------CCCTTSCCHHHHHHHT-
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcc--------------cccCCCCCcHHHHHHHc-
Confidence 4556666666666666655 8999999999998742 23578999999999765
Q ss_pred hCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhc
Q 037701 133 AKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLK 212 (358)
Q Consensus 133 ~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~ 212 (358)
++.+++++|++.|++++..+..|.||||+|+..++.+++++|++.++...+.++..|.||||+|+..++.+++++|++
T Consensus 68 --g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 145 (253)
T 1yyh_A 68 --SRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN 145 (253)
T ss_dssp --TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHH
T ss_pred --CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999886678889999999999999999999999999
Q ss_pred CCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCcccccccc
Q 037701 213 SEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIH 292 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 292 (358)
.|.+ ++..+..|.||||+|+..|+.+++++|++.+++ ++.++..|.||||+|+..++.+++++|+++| ++++
T Consensus 146 ~g~~----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g---a~~~ 217 (253)
T 1yyh_A 146 SHAD----VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHF---ANRD 217 (253)
T ss_dssp TTCC----TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCTT
T ss_pred cCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC---CCcc
Confidence 8854 777888999999999999999999999999876 4788999999999999999999999999998 8889
Q ss_pred CCCCCCChHHHHHHHhCCCCc-eeecCCc
Q 037701 293 GRDKNGNTPLHVLAAACRDSS-YFIVPDS 320 (358)
Q Consensus 293 ~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g 320 (358)
.+|..|.|||++|++.++.++ ++|....
T Consensus 218 ~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 218 ITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 999999999999999999888 6666543
No 13
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.7e-43 Score=307.87 Aligned_cols=259 Identities=18% Similarity=0.178 Sum_probs=220.9
Q ss_pred ccchhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHH
Q 037701 63 PSLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAE 142 (358)
Q Consensus 63 ~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~ 142 (358)
....+..|..|.||||+|+..|+.++|++|+++|++ ++..+..|.||||+|+.. ++.+++++
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~---------------~~~~d~~g~t~L~~A~~~---g~~~~v~~ 71 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVS---------------PTIQNRFGCTALHLACKF---GCVDTAKY 71 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC---------------TTCCCTTCCCHHHHHHHH---CCHHHHHH
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------------ccccCCCCCcHHHHHHHc---CCHHHHHH
Confidence 344566788899999999999999999999999887 446888999999999876 99999999
Q ss_pred HHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHh----CCccccc-----------------ccCCCCCHHHHHHHc
Q 037701 143 ILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEK----KKILTRE-----------------RDRHGWTSLHHAAYL 201 (358)
Q Consensus 143 Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~----~~~~~~~-----------------~~~~~~t~l~~a~~~ 201 (358)
|++.|++++ +..|.||||+|+..++.+++++|++. +.. .+. .+..|.||||+|+..
T Consensus 72 Ll~~g~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 148 (364)
T 3ljn_A 72 LASVGEVHS--LWHGQKPIHLAVMANKTDLVVALVEGAKERGQM-PESLLNECDEREVNEIGSHVKHCKGQTALHWCVGL 148 (364)
T ss_dssp HHHHCCCCC--CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCC-HHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHS
T ss_pred HHHCCCCcc--ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCC-HHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHc
Confidence 999998655 35789999999999999999999998 554 233 778899999999999
Q ss_pred C--CHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCC----cccccCCCCcHHHHHHHcCCh
Q 037701 202 G--HSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPES----YSIVDNRGWNARHFAMVSLRG 275 (358)
Q Consensus 202 ~--~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~----~~~~~~~g~t~l~~a~~~~~~ 275 (358)
| +.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|++.+++. ++..+..|.||||+|+..|+.
T Consensus 149 g~~~~~~v~~Ll~~ga~----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~ 224 (364)
T 3ljn_A 149 GPEYLEMIKILVQLGAS----PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWE 224 (364)
T ss_dssp CGGGHHHHHHHHHHTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCH
T ss_pred CCchHHHHHHHHHcCCC----CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCH
Confidence 9 99999999999854 7778899999999999999999999999988763 578899999999999999999
Q ss_pred hHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeecCCcchHHH------------HhhCCCchhhHhhhCCC
Q 037701 276 GVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVPDSDMYEA------------VNKQNTSVEHIVRYGYP 342 (358)
Q Consensus 276 ~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~~~~------------~~~~g~t~l~~a~~~~~ 342 (358)
+++++|+++| ++++.+|..|.||||+|+..++..+ ++|++.|++++. .+..|+||++.|+.. +
T Consensus 225 ~~v~~Ll~~g---ad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~-~ 300 (364)
T 3ljn_A 225 DVAMRFVEMG---IDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAAD-P 300 (364)
T ss_dssp HHHHHHHTTT---CCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCC-H
T ss_pred HHHHHHHHcC---CCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhc-c
Confidence 9999999998 8999999999999999999999988 999999999877 556788888888764 5
Q ss_pred Ccccccce
Q 037701 343 ELEVIPSL 350 (358)
Q Consensus 343 ~~~~~~~L 350 (358)
+.+.+..|
T Consensus 301 ~~~~v~~l 308 (364)
T 3ljn_A 301 SKQEVLQL 308 (364)
T ss_dssp HHHHHHHH
T ss_pred CHHHHHHH
Confidence 44444444
No 14
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=7.4e-43 Score=304.16 Aligned_cols=257 Identities=23% Similarity=0.254 Sum_probs=229.4
Q ss_pred ChhhhcccccCCchhhhhhhhhhccceec-cCCCceehhhhccccccccchHHHHHHH----HhhCccchhcccCCCCch
Q 037701 2 NPDLYRDAAKGEIEPFNEIAKDELVSIAT-HEKNTVLHVNIASQQEGERVSTEFVEGI----LEMCPSLLLQVNDKGDTP 76 (358)
Q Consensus 2 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~g~t~ 76 (358)
.++||.|+. |+.++++.|+... ++..+ ..|.||||+|+..|+ .+++++|+.. +-..+.+++..|..|.||
T Consensus 95 ~t~L~~Aa~-~~~~~~~~L~~~~-~n~~d~~~g~t~Lh~Aa~~g~---~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~Tp 169 (373)
T 2fo1_E 95 PIKLHTEAA-GSYAITEPITRES-VNIIDPRHNRTVLHWIASNSS---AEKSEDLIVHEAKECIAAGADVNAMDCDENTP 169 (373)
T ss_dssp CCHHHHHHH-SSSCCCSCCSTTT-TTTCCCSSCCCHHHHHHCTTC---CSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCH
T ss_pred ccHHHHHhc-CCchHHHHhcccc-ccccCCcCCCCHHHHHHHCCC---HHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCH
Confidence 478999999 5568999988765 77777 799999999999999 8888888631 224578899999999999
Q ss_pred hHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcC---CCCCCC
Q 037701 77 LHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENC---PSADHR 153 (358)
Q Consensus 77 Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~---~~~~~~ 153 (358)
||+|+..|+.++|++|+++|++ ++..+..|.||||+|+.. ++.+++++|++.+ .+++..
T Consensus 170 L~~A~~~g~~~iv~~Ll~~ga~---------------~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~ 231 (373)
T 2fo1_E 170 LMLAVLARRRRLVAYLMKAGAD---------------PTIYNKSERSALHQAAAN---RDFGMMVYMLNSTKLKGDIEEL 231 (373)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC---------------SCCCCTTCCCHHHHHHHT---TCHHHHHHHTTSHHHHHTTSCC
T ss_pred HHHHHHcChHHHHHHHHHCCCC---------------CcccCCCCCCHHHHHHHC---CCHHHHHHHHhcCccccChhhc
Confidence 9999999999999999999988 446888999999999765 9999999999988 799999
Q ss_pred CCCCccHHHHHHhcC---cHHHHHHHHHhCCcccc-------cccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccc
Q 037701 154 GPDGLTTLHAAVICN---AEDVIKLLLEKKKILTR-------ERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYK 223 (358)
Q Consensus 154 ~~~~~t~l~~a~~~~---~~~~v~~Ll~~~~~~~~-------~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 223 (358)
+..|.||||+|+..+ +.+++++|++.|++... ..+..|.||||+|+..|+.+++++|++.+. .+++.
T Consensus 232 d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~---~~~n~ 308 (373)
T 2fo1_E 232 DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG---SNKDK 308 (373)
T ss_dssp CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSC---CCTTC
T ss_pred CCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcC---CCccC
Confidence 999999999999998 89999999999987432 256789999999999999999999998763 34788
Q ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCc
Q 037701 224 EDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENP 285 (358)
Q Consensus 224 ~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 285 (358)
.+..|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|++++
T Consensus 309 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad-~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~ 369 (373)
T 2fo1_E 309 QDEDGKTPIMLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIVDIFDRCR 369 (373)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 899999999999999999999999999876 5889999999999999999999999999987
No 15
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.2e-42 Score=292.09 Aligned_cols=251 Identities=20% Similarity=0.165 Sum_probs=189.0
Q ss_pred hhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHh
Q 037701 66 LLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILE 145 (358)
Q Consensus 66 ~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~ 145 (358)
++.+|..|.||||+|+..|+.++|++|+++|++... ++..+..|.||||+|+.. ++.+++++|++
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~ 66 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEY------------LDLQNDLGQTALHLAAIL---GEASTVEKLYA 66 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGG------------GGCCCTTSCCHHHHHHHH---TCHHHHHHHHH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc------------ccccCCCCCCHHHHHHHc---CCHHHHHHHHH
Confidence 456788999999999999999999999999887432 346788999999999876 99999999999
Q ss_pred cCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccc------------cccCCCCCHHHHHHHcCCHHH-HHHHhc
Q 037701 146 NCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTR------------ERDRHGWTSLHHAAYLGHSNI-TSMMLK 212 (358)
Q Consensus 146 ~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~------------~~~~~~~t~l~~a~~~~~~~~-~~~Ll~ 212 (358)
+|++++..+..|.||||+|+..++.+++++|++.++.... .....+.++++.++..+.... ...+..
T Consensus 67 ~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (282)
T 1oy3_D 67 AGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDED 146 (282)
T ss_dssp TTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCC
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhh
Confidence 9999999999999999999999999999999988765221 122345566666655544332 233333
Q ss_pred CCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccC-CCCcHHHHHHHcCChhHHHHHhcCccccccc
Q 037701 213 SEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDN-RGWNARHFAMVSLRGGVLKSLLENPYVISLI 291 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 291 (358)
.+ .+++..+..|.||||+|+..|+.+++++|++.+++. +..+. .|.||||+|+..++.+++++|+++| +++
T Consensus 147 ~~----~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g---ad~ 218 (282)
T 1oy3_D 147 WR----LQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLAVEAQAASVLELLLKAG---ADP 218 (282)
T ss_dssp GG----GGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT---CCT
T ss_pred hh----hcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC---CCC
Confidence 33 567788999999999999999999999999998775 56664 5999999999999999999999998 899
Q ss_pred cCCCCCCChHHHHHHHhCCCCc-eeecCCcchHHHHhhCCCchhhHhhh
Q 037701 292 HGRDKNGNTPLHVLAAACRDSS-YFIVPDSDMYEAVNKQNTSVEHIVRY 339 (358)
Q Consensus 292 ~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~~~~~~~~g~t~l~~a~~ 339 (358)
+.+|..|+||||+|+..++..+ ++|+++|++++.+|..|.||+++|..
T Consensus 219 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 219 TARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp TCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred cccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 9999999999999999999888 99999999999999999999999965
No 16
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=288.12 Aligned_cols=247 Identities=16% Similarity=0.125 Sum_probs=210.6
Q ss_pred CCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHH
Q 037701 32 EKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIR 111 (358)
Q Consensus 32 ~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 111 (358)
+|+||||+|+..|+ .+++++|++ .+.+++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 2 ~g~t~L~~A~~~g~---~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------- 61 (261)
T 2xai_A 2 SDWSPMHEAAIHGH---QLSLRNLIS----QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ------------- 61 (261)
T ss_dssp --CCHHHHHHHHTC---HHHHHHHHH----TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-------------
T ss_pred CCCCHHHHHHHcCC---HHHHHHHHH----CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-------------
Confidence 58899999999999 888888877 4777888999999999999999999999999999887
Q ss_pred HHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCC
Q 037701 112 WMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHG 191 (358)
Q Consensus 112 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 191 (358)
++..+..|.||||+|+.. ++.+++++|++.|++++. +..|.||||+|+..++.+++++|++.|++ .+.++..|
T Consensus 62 --~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g 134 (261)
T 2xai_A 62 --VNGVTADWHTPLFNACVS---GSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGN-IDHKISHL 134 (261)
T ss_dssp --TTCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBTTT
T ss_pred --CCCCCCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCcCCCCC
Confidence 446788999999999876 999999999999998885 45589999999999999999999999887 56788999
Q ss_pred CCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHH
Q 037701 192 WTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMV 271 (358)
Q Consensus 192 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 271 (358)
.||||+|+..|+.+++++|++.|++ ++. +..|.||||+|+..++.+++++|++.+++ ++.+|..|+||+|+|+.
T Consensus 135 ~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpl~~A~~ 208 (261)
T 2xai_A 135 GTPLYLACENQQRACVKKLLESGAD----VNQ-GKGQDSPLHAVARTASEELACLLMDFGAD-TQAKNAEGKRPVELVPP 208 (261)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHTCC----TTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGSCT
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCCC----CCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCChhhhccc
Confidence 9999999999999999999999865 443 67899999999999999999999999876 48899999999999985
Q ss_pred cCChhHHHHHhcCccc-----cccccCCCCCCChHHHHHHHhCCCCc
Q 037701 272 SLRGGVLKSLLENPYV-----ISLIHGRDKNGNTPLHVLAAACRDSS 313 (358)
Q Consensus 272 ~~~~~~~~~Ll~~~~~-----~~~~~~~~~~g~tpL~~a~~~~~~~~ 313 (358)
+ .++++.|++++.. .++++.++..|.||+|.|.+...+..
T Consensus 209 ~--~~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~ 253 (261)
T 2xai_A 209 E--SPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPED 253 (261)
T ss_dssp T--CTHHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHH
T ss_pred c--ccHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcHH
Confidence 4 4588999987642 24566788999999999988766554
No 17
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=6.9e-44 Score=310.37 Aligned_cols=268 Identities=18% Similarity=0.126 Sum_probs=162.5
Q ss_pred eccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchh
Q 037701 29 ATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVD 108 (358)
Q Consensus 29 ~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 108 (358)
.|..|.||||+|+..|+ .+++++|++ .+.+++..|..|.||||+|+..|+.++|++|+++|++
T Consensus 16 ~d~~g~t~L~~Aa~~g~---~~~v~~Ll~----~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---------- 78 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQ---TDEVRRLIE----TGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV---------- 78 (364)
T ss_dssp CCHHHHHHHHHHHHHTC---HHHHHHHHH----TTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCC----------
T ss_pred cCCCCCCHHHHHHHcCC---HHHHHHHHH----cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC----------
Confidence 55666666666666666 666666555 3555666666666666666666666666666666653
Q ss_pred HHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhc----CCCCCC-----------------CCCCCccHHHHHHhc
Q 037701 109 WIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILEN----CPSADH-----------------RGPDGLTTLHAAVIC 167 (358)
Q Consensus 109 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~----~~~~~~-----------------~~~~~~t~l~~a~~~ 167 (358)
..+..|.||||+|+.. ++.+++++|++. |.+++. .+..|.||||+|+..
T Consensus 79 -------~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 148 (364)
T 3ljn_A 79 -------HSLWHGQKPIHLAVMA---NKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGL 148 (364)
T ss_dssp -------CCCBTTBCHHHHHHHT---TCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHS
T ss_pred -------ccccCCCCHHHHHHHc---CCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHc
Confidence 2334566666666544 666666666666 555444 555566666666666
Q ss_pred C--cHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCc-ccccccccCCCCCCHHHHHHHcCcHHHH
Q 037701 168 N--AEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDD-KIVALYKEDDRGMTALHLAASQGYERVV 244 (358)
Q Consensus 168 ~--~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~-~~~~~~~~~~~g~t~l~~a~~~~~~~~v 244 (358)
| +.+++++|++.|++ .+.++..|.||||+|+..|+.+++++|++.+++ ...+++..+..|.||||+|+..|+.+++
T Consensus 149 g~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v 227 (364)
T 3ljn_A 149 GPEYLEMIKILVQLGAS-PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVA 227 (364)
T ss_dssp CGGGHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHH
T ss_pred CCchHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHH
Confidence 6 66666666666655 455566666666666666666666666666543 2233555666666666666666666666
Q ss_pred HHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCcccc---------ccccCCCCCCChHHHHHHHhCCCCc-e
Q 037701 245 RRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVI---------SLIHGRDKNGNTPLHVLAAACRDSS-Y 314 (358)
Q Consensus 245 ~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~---------~~~~~~~~~g~tpL~~a~~~~~~~~-~ 314 (358)
++|++.+++ ++.+|..|.||||+|+..|+.+++++|++++... ......+..|++|++.|+..+.... .
T Consensus 228 ~~Ll~~gad-~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~ 306 (364)
T 3ljn_A 228 MRFVEMGID-VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVL 306 (364)
T ss_dssp HHHHTTTCC-TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHH
T ss_pred HHHHHcCCC-CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHH
Confidence 666666555 3566666666666666666666666666665210 0011133456666666666554444 4
Q ss_pred eecCCcchHHH
Q 037701 315 FIVPDSDMYEA 325 (358)
Q Consensus 315 ~Ll~~g~~~~~ 325 (358)
.|+..+++...
T Consensus 307 ~ll~~~~~~~~ 317 (364)
T 3ljn_A 307 QLLQEKLDEVV 317 (364)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 45555554433
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2e-41 Score=279.73 Aligned_cols=230 Identities=22% Similarity=0.247 Sum_probs=180.5
Q ss_pred cceeccCCCceehhhhccc-------------cccccchHHHHHHHHhhCccchhcccCCCCchhHHHHhcCCcHHHHHH
Q 037701 26 VSIATHEKNTVLHVNIASQ-------------QEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAKCRHPAVVEVL 92 (358)
Q Consensus 26 ~~~~~~~~~t~l~~a~~~~-------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~L 92 (358)
++.+|.+|.||||+|+..| + .+++++|++ .+....+..|..|.||||+|+..|+.++|++|
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~---~~~v~~Ll~---~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 76 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDA---PAVISDFIY---QGASLHNQTDRTGETALHLAARYSRSDAAKRL 76 (253)
T ss_dssp -------------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCC---hHHHHHHHH---ccCCcccccCCCCCcHHHHHHHcCCHHHHHHH
Confidence 5668999999999999987 6 777777765 34444456689999999999999999999999
Q ss_pred HHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCC-CCCCCCCCCccHHHHHHhcCcHH
Q 037701 93 IKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCP-SADHRGPDGLTTLHAAVICNAED 171 (358)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~-~~~~~~~~~~t~l~~a~~~~~~~ 171 (358)
+++|++ ++..+..|.||||+|+.. ++.+++++|++.+. +++..+..|.||||+|+..++.+
T Consensus 77 l~~g~~---------------~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 138 (253)
T 1yyh_A 77 LEASAD---------------ANIQDNMGRTPLHAAVSA---DAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEG 138 (253)
T ss_dssp HHTTCC---------------TTCCCTTSCCHHHHHHHH---TCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSS
T ss_pred HHcCCC---------------CCCCCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHH
Confidence 999988 446889999999999877 99999999999987 89999999999999999999999
Q ss_pred HHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhC
Q 037701 172 VIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHC 251 (358)
Q Consensus 172 ~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~ 251 (358)
++++|++.|++ .+.++..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|++.+
T Consensus 139 ~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 213 (253)
T 1yyh_A 139 MLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN----KDMQNNREETPLFLAAREGSYETAKVLLDHF 213 (253)
T ss_dssp HHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999888 677899999999999999999999999999855 7778999999999999999999999999998
Q ss_pred CCCcccccCCCCcHHHHHHHcCChhHHHHHhcCc
Q 037701 252 PESYSIVDNRGWNARHFAMVSLRGGVLKSLLENP 285 (358)
Q Consensus 252 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 285 (358)
++ ++.+|..|.||+++|+.+|+.+++++|.+..
T Consensus 214 a~-~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 214 AN-RDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp CC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred CC-ccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 87 4889999999999999999999999999865
No 19
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.2e-43 Score=304.09 Aligned_cols=282 Identities=20% Similarity=0.172 Sum_probs=248.7
Q ss_pred cceeccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhc
Q 037701 26 VSIATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELES 105 (358)
Q Consensus 26 ~~~~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 105 (358)
....+..+.++||.|+..|+ .+. +..++...+.+++..|..|.||||+|+..|+.++|++|+++|++
T Consensus 17 ~~~~~~~~~~~L~~A~~~g~---~~~---v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------- 83 (351)
T 3utm_A 17 AVLTGEYKKDELLEAARSGN---EEK---LMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD------- 83 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTC---HHH---HHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------
T ss_pred eeeeccccchhHHHHHHcCC---HHH---HHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------
Confidence 34467788999999999999 444 44445567888889999999999999999999999999999988
Q ss_pred chhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccc
Q 037701 106 GVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTR 185 (358)
Q Consensus 106 ~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~ 185 (358)
++..+..|.||||+|+.. ++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++ .+
T Consensus 84 --------~~~~~~~g~t~L~~A~~~---g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~ 151 (351)
T 3utm_A 84 --------VHAKDKGGLVPLHNACSY---GHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD-PT 151 (351)
T ss_dssp --------TTCCCTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TT
T ss_pred --------CCccCCCCCcHHHHHHHC---CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-Cc
Confidence 446888999999999765 999999999999999999999999999999999999999999999888 56
Q ss_pred cccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcH
Q 037701 186 ERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNA 265 (358)
Q Consensus 186 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 265 (358)
..+..|.||+++++..+..+.+++.... .++..++..+..+.++.++...... ...+..|.||
T Consensus 152 ~~~~~g~~~l~~a~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~t~ 214 (351)
T 3utm_A 152 LVNCHGKSAVDMAPTPELRERLTYEFKG----------------HSLLQAAREADLAKVKKTLALEIIN-FKQPQSHETA 214 (351)
T ss_dssp CCCTTSCCHHHHCSSHHHHHHHHHHHHH----------------HHHHHHHHTTCHHHHHHHTTTCCTT-CCCTTTCCCH
T ss_pred cccCCCCcchHHHhhhhhHHHHHhhhcc----------------cHHHHHHHhccHHHHHHHHHhhccc-ccCCCCCCCH
Confidence 7889999999999888777777665532 3678888999999999999886554 4477889999
Q ss_pred HHHHHHc---CChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeecCCcchHHHHhhCCCchhhHhhhCC
Q 037701 266 RHFAMVS---LRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVPDSDMYEAVNKQNTSVEHIVRYGY 341 (358)
Q Consensus 266 l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 341 (358)
||+|+.. +..+++++|++.+ ++++.+|..|.||||+|+..++..+ ++|++.|++++.+|..|+|||++|+..
T Consensus 215 L~~A~~~~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~- 290 (351)
T 3utm_A 215 LHCAVASLHPKRKQVAELLLRKG---ANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALA- 290 (351)
T ss_dssp HHHHHHCCSTTHHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-
T ss_pred HHHHHHHhCccHHHHHHHHHHcC---CCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc-
Confidence 9999999 5578999999999 8999999999999999999999999 999999999999999999999999985
Q ss_pred CCcccccceeee
Q 037701 342 PELEVIPSLLII 353 (358)
Q Consensus 342 ~~~~~~~~L~~~ 353 (358)
++.+++++|+..
T Consensus 291 ~~~~~v~~Ll~~ 302 (351)
T 3utm_A 291 GHLQTCRLLLSY 302 (351)
T ss_dssp TCHHHHHHHHHT
T ss_pred CcHHHHHHHHHc
Confidence 999999999865
No 20
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5.7e-42 Score=281.15 Aligned_cols=232 Identities=21% Similarity=0.223 Sum_probs=207.8
Q ss_pred HHhhcccCCcHHHHHHHHHhCCcHHHHHHHHh----cCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccC
Q 037701 114 LLVENEEKNTALHEAVQSAAKGSVEMVAEILE----NCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDR 189 (358)
Q Consensus 114 ~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~----~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~ 189 (358)
++..|..|.||||+|+.. ++.+++++|++ .+.+++..+..|.||||+|+..++.+++++|++.|.+ .+..+.
T Consensus 2 ~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~ 77 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQ---GNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-PMALDR 77 (241)
T ss_dssp -----CTTCCHHHHHHHT---TCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCT
T ss_pred ccccCCCCCcHHHHHHHc---CCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCC
Confidence 446899999999999776 99999999997 7899999999999999999999999999999999987 567789
Q ss_pred CCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCccccc-CCCCcHHHH
Q 037701 190 HGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVD-NRGWNARHF 268 (358)
Q Consensus 190 ~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~l~~ 268 (358)
.|.||||+|+..++.+++++|++.+.....+++..+..|.||||+|+..++.+++++|++.+.+. +..+ ..|.||||+
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~g~t~L~~ 156 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADI-DAVDIKSGRSPLIH 156 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc-ccccccCCCcHHHH
Confidence 99999999999999999999999987555568888999999999999999999999999998775 5566 789999999
Q ss_pred HHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeecCCcchHHHHhhCCCchhhHhhhCCCCcccc
Q 037701 269 AMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVPDSDMYEAVNKQNTSVEHIVRYGYPELEVI 347 (358)
Q Consensus 269 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~ 347 (358)
|+..++.+++++|+++| ++++.+|..|.||||+|+..++..+ ++|++.|+|++.+|..|+||+++|+.. ++.+++
T Consensus 157 A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~-~~~~i~ 232 (241)
T 1k1a_A 157 AVENNSLSMVQLLLQHG---ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSR-RVIDIL 232 (241)
T ss_dssp HHHTTCHHHHHHHHHTT---CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSH-HHHHHH
T ss_pred HHHcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhc-CcHHHH
Confidence 99999999999999998 8999999999999999999999999 999999999999999999999999884 899999
Q ss_pred cceeeee
Q 037701 348 PSLLIIN 354 (358)
Q Consensus 348 ~~L~~~~ 354 (358)
+.|...+
T Consensus 233 ~~l~~~~ 239 (241)
T 1k1a_A 233 RGKATRP 239 (241)
T ss_dssp TC-----
T ss_pred hhhccCC
Confidence 9987643
No 21
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=8.3e-41 Score=273.50 Aligned_cols=222 Identities=22% Similarity=0.309 Sum_probs=185.8
Q ss_pred chhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHH
Q 037701 65 LLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEIL 144 (358)
Q Consensus 65 ~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll 144 (358)
+++..+..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+.. ++.+++++|+
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll 64 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN---------------IDTCSEDQRTPLMEAAEN---NHLEAVKYLI 64 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC---------------TTCCCTTCCCHHHHHHHT---TCHHHHHHHH
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC---------------cCccCCCCCCHHHHHHHh---CCHHHHHHHH
Confidence 3556778888999999999999999999888877 445777888999998665 8888999999
Q ss_pred hcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCccccccccc
Q 037701 145 ENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKE 224 (358)
Q Consensus 145 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 224 (358)
+.|++++..+..|.||||+|+..++.+++++|++.+....+..+..|.||||+|+..++.+++++|++.|.+ ++..
T Consensus 65 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~ 140 (237)
T 3b7b_A 65 KAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD----INIR 140 (237)
T ss_dssp TTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCC
T ss_pred hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCcc
Confidence 888888888888889999999888899999988888555677788888899888888888888888888854 6667
Q ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHH
Q 037701 225 DDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHV 304 (358)
Q Consensus 225 ~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~ 304 (358)
+..|.||||+|+..|+.+++++|++.+.+ ++..|..|.||||+|+..++.+++++|+++| ++++.+|..|.||||+
T Consensus 141 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---ad~~~~d~~g~t~l~~ 216 (237)
T 3b7b_A 141 DNEENICLHWAAFSGCVDIAEILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLSRD---SDVTLKNKEGETPLQC 216 (237)
T ss_dssp CTTSCCHHHHHHHHCCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT---CCTTCCCTTSCCHHHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHhHHHHHHHcC---CCCCccCCCCCCHHHH
Confidence 88888888888888888888888888766 4778888888888888888888888888888 7888888888888888
Q ss_pred HHHhCCCC
Q 037701 305 LAAACRDS 312 (358)
Q Consensus 305 a~~~~~~~ 312 (358)
|+..++..
T Consensus 217 A~~~~~~~ 224 (237)
T 3b7b_A 217 ASLNSQVW 224 (237)
T ss_dssp SCTTCHHH
T ss_pred HHHHHHHH
Confidence 88777543
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.4e-41 Score=278.86 Aligned_cols=233 Identities=21% Similarity=0.207 Sum_probs=140.8
Q ss_pred hcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhc
Q 037701 67 LQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILEN 146 (358)
Q Consensus 67 ~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~ 146 (358)
+.+|..|.||||+|+..|+.+++++|++........ ++..+..|.||||+|+.. ++.+++++|++.
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-----------~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~ 68 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE-----------LDIYNNLRQTPLHLAVIT---TLPSVVRLLVTA 68 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC-----------SCCCCTTSCCHHHHHHHT---TCHHHHHHHHHT
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCC-----------CCcccccCCCHHHHHHHc---CCHHHHHHHHHc
Confidence 345666666666666666666666666532111000 334556666666666544 666666666666
Q ss_pred CCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCc---ccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccc
Q 037701 147 CPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKI---LTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYK 223 (358)
Q Consensus 147 ~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~---~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 223 (358)
|++++..+..|.||||+|+..++.+++++|++.+.. ..+..+..|.||||+|+..++.+++++|++.+.+ ++.
T Consensus 69 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~ 144 (241)
T 1k1a_A 69 GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD----IDA 144 (241)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----TTC
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC----ccc
Confidence 666666666666666666666666666666666551 2445566666666666666666666666666643 444
Q ss_pred cC-CCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHH
Q 037701 224 ED-DRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPL 302 (358)
Q Consensus 224 ~~-~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL 302 (358)
.+ ..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..++.+++++|+++| ++++.+|..|.|||
T Consensus 145 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~tpl 220 (241)
T 1k1a_A 145 VDIKSGRSPLIHAVENNSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVRSG---ADSSLKNCHNDTPL 220 (241)
T ss_dssp CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCTT
T ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcC---CCCCCcCCCCCCHH
Confidence 44 5566677777766667777776666554 3566666667777777777777777777666 66666666677777
Q ss_pred HHHHHhCCCCc-eeecCCcc
Q 037701 303 HVLAAACRDSS-YFIVPDSD 321 (358)
Q Consensus 303 ~~a~~~~~~~~-~~Ll~~g~ 321 (358)
|+|+..+..++ +.|.+.++
T Consensus 221 ~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 221 MVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp TTCSSHHHHHHHTC------
T ss_pred HHHHhcCcHHHHhhhccCCC
Confidence 77666666655 55555543
No 23
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.3e-40 Score=271.34 Aligned_cols=226 Identities=23% Similarity=0.218 Sum_probs=207.0
Q ss_pred CCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCC
Q 037701 71 DKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSA 150 (358)
Q Consensus 71 ~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~ 150 (358)
..+.+|||.|+..|+.++++++++.+... ++..+..|.||||+|+.. ++.+++++|++.|+++
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~--------------~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~ 66 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSL--------------ATRTDQDSRTALHWACSA---GHTEIVEFLLQLGVPV 66 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGG--------------GGCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCS
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhh--------------hhcCCCCCCCHHHHHHHc---CcHHHHHHHHHhCCCC
Confidence 45789999999999999999999987653 335788999999999887 9999999999999999
Q ss_pred CCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCC
Q 037701 151 DHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMT 230 (358)
Q Consensus 151 ~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t 230 (358)
+..+..|.||||+|+..++.+++++|++.+.+ .+.++..|.||||+|+..++.+++++|++.+.+ ++..+..|.|
T Consensus 67 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t 141 (231)
T 3aji_A 67 NDKDDAGWSPLHIAASAGXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN----PDAKDHYDAT 141 (231)
T ss_dssp CCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCC
T ss_pred CCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCc
Confidence 99999999999999999999999999999888 567889999999999999999999999999854 7778899999
Q ss_pred HHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCC
Q 037701 231 ALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACR 310 (358)
Q Consensus 231 ~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~ 310 (358)
|||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..++.+++++|+++| ++++.+|..|.|||++|+..++
T Consensus 142 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 142 AMHRAAAKGNLKMVHILLFYKAS-TNIQDTEGNTPLHLACDEERVEEAKFLVTQG---ASIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCSCCCCTTSCCHHHHSCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCCC-ccccCCCCCCHHHHHHHCCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHhhHH
Confidence 99999999999999999999776 4889999999999999999999999999998 8899999999999999998888
Q ss_pred CCc-eeecCCcch
Q 037701 311 DSS-YFIVPDSDM 322 (358)
Q Consensus 311 ~~~-~~Ll~~g~~ 322 (358)
..+ ++|++.|++
T Consensus 218 ~~i~~lL~~~~a~ 230 (231)
T 3aji_A 218 LILKRLAEGEEAS 230 (231)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHcccccc
Confidence 887 888877765
No 24
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.4e-42 Score=282.97 Aligned_cols=238 Identities=19% Similarity=0.211 Sum_probs=175.0
Q ss_pred cccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcC
Q 037701 68 QVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENC 147 (358)
Q Consensus 68 ~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~ 147 (358)
.+|..+.+||+.|+..|+.++|++|++.|+........ .++..+..+.|||+.|+.. .....+++.|++.|
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~-------~~~~~~~~~~t~L~~a~~~--~~~~~~v~~Ll~~G 76 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAED-------TVSAADPEFCHPLCQCPKC--APAQKRLAKVPASG 76 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC-------------------------------------------------CC
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccc-------cccccCccCCCHHHHHHHh--CCHHHHHHHHHHCC
Confidence 45677889999999999999999999988764322111 1456788899999999754 23346889999999
Q ss_pred CCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCC
Q 037701 148 PSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDR 227 (358)
Q Consensus 148 ~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 227 (358)
+++|..+.+|.||||+|+..|+.+++++|++.+++ ...++..|.||++.|+..++.+++++|++.|++ ++.++..
T Consensus 77 advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~----~n~~d~~ 151 (269)
T 4b93_B 77 LGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGAN-AGARNADQAVPLHLACQQGHFQVVKCLLDSNAK----PNKKDLS 151 (269)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----SCCCCTT
T ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-cCccCCCCCCccccccccChHHHHHHHHHCCCC----CCCCCCC
Confidence 99999999999999999999999999999999988 577899999999999999999999999999854 7888999
Q ss_pred CCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHH
Q 037701 228 GMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAA 307 (358)
Q Consensus 228 g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~ 307 (358)
|.||||+|+..|+.+++++|++.+++ ++.++..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|++
T Consensus 152 g~TpL~~A~~~g~~~~v~~Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G---ad~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 152 GNTPLIYACSGGHHELVALLLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLLHG---ASVQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp CCCHHHHHHHTTCGGGHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT---CCSCCCCTTSCCSGGGSCT
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHh
Confidence 99999999999999999999999876 5889999999999999999999999999999 8999999999999999987
Q ss_pred hCCC-Cc-eeecCCcchH
Q 037701 308 ACRD-SS-YFIVPDSDMY 323 (358)
Q Consensus 308 ~~~~-~~-~~Ll~~g~~~ 323 (358)
++.. ++ +.|...++.+
T Consensus 228 ~~~i~~lL~~l~~~~~~~ 245 (269)
T 4b93_B 228 NSKIMELLQVVPSCVASL 245 (269)
T ss_dssp TCHHHHHTTC--------
T ss_pred CCcHHHHHHHHHHhchhh
Confidence 6641 12 4555555443
No 25
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.5e-40 Score=271.90 Aligned_cols=220 Identities=22% Similarity=0.298 Sum_probs=204.3
Q ss_pred HHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCC
Q 037701 114 LLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWT 193 (358)
Q Consensus 114 ~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 193 (358)
++..+..|.||||+|+.. ++.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|.. .+.++..|.|
T Consensus 4 ~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 79 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEA---GHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-VDPKDAEGST 79 (237)
T ss_dssp CCCSSCCSCCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-CCCCCTTSCC
T ss_pred cccccCCCCCHHHHHHHc---CcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCc
Confidence 346788999999999877 999999999999999999999999999999999999999999999887 5678899999
Q ss_pred HHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcC
Q 037701 194 SLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSL 273 (358)
Q Consensus 194 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 273 (358)
|||+|+..|+.+++++|++.+. .+++..+..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+..+
T Consensus 80 ~L~~A~~~~~~~~~~~Ll~~~~---~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 80 CLHLAAKKGHYEVVQYLLSNGQ---MDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD-INIRDNEENICLHWAAFSG 155 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTC---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHhCCC---CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHCC
Confidence 9999999999999999999884 34677888999999999999999999999999876 4789999999999999999
Q ss_pred ChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeecCCcchHHHHhhCCCchhhHhhhCCCCcc
Q 037701 274 RGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVPDSDMYEAVNKQNTSVEHIVRYGYPELE 345 (358)
Q Consensus 274 ~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~ 345 (358)
+.+++++|+++| ++++.+|..|.||||+|+..++..+ ++|++.|+|++.+|..|.||+++|+.. ++.+
T Consensus 156 ~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~-~~~~ 224 (237)
T 3b7b_A 156 CVDIAEILLAAK---CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLN-SQVW 224 (237)
T ss_dssp CHHHHHHHHTTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTT-CHHH
T ss_pred CHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHH-HHHH
Confidence 999999999999 8999999999999999999999988 999999999999999999999999874 6553
No 26
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=8.3e-41 Score=280.78 Aligned_cols=255 Identities=20% Similarity=0.193 Sum_probs=187.5
Q ss_pred cceeccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhc
Q 037701 26 VSIATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELES 105 (358)
Q Consensus 26 ~~~~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 105 (358)
++..+..|.||||+|+..|+ .+++++|++. ......++.++..|.||||+|+..|+.+++++|+++|++
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~---~~~v~~Ll~~-g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------- 70 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQH---EPFLDFLLGF-SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG------- 70 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTC---HHHHHHHHHH-HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-------
T ss_pred CCccCCCCCcHHHHHHHcCC---HHHHHHHHhc-CCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------
Confidence 35678999999999999999 8889888873 222233788999999999999999999999999999988
Q ss_pred chhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCC-------------CCCCccHHHHHHhcCcHHH
Q 037701 106 GVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHR-------------GPDGLTTLHAAVICNAEDV 172 (358)
Q Consensus 106 ~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~-------------~~~~~t~l~~a~~~~~~~~ 172 (358)
++..+..|.||||+|+.. ++.+++++|++.+++.... ...+.++++.+...+....
T Consensus 71 --------~~~~~~~g~tpL~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (282)
T 1oy3_D 71 --------VLVAERGGHTALHLACRV---RAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENE 139 (282)
T ss_dssp --------SSCCCTTSCCHHHHHTTT---TCHHHHHHHSSSCCSSCCCC-------------------------------
T ss_pred --------CCCCCCCCCCHHHHHHHc---CCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchh
Confidence 446888999999999654 9999999999998764321 1234556666655544333
Q ss_pred HHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCC-CCCCHHHHHHHcCcHHHHHHHHhhC
Q 037701 173 IKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDD-RGMTALHLAASQGYERVVRRIIRHC 251 (358)
Q Consensus 173 v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~v~~Ll~~~ 251 (358)
+..++.......+..+..|.||||+|+..|+.+++++|++.|++ ++..+. .|.||||+|+..|+.+++++|++.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 215 (282)
T 1oy3_D 140 EEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD----LNKPEPTCGRTPLHLAVEAQAASVLELLLKAG 215 (282)
T ss_dssp ----CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC----TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred hhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC
Confidence 33332222233567889999999999999999999999999865 666664 4999999999999999999999998
Q ss_pred CCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCC
Q 037701 252 PESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACR 310 (358)
Q Consensus 252 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~ 310 (358)
++ ++.+|..|.||||+|+..++.+++++|+++| ++++.++..|.|||++|.....
T Consensus 216 ad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 216 AD-PTARMYGGRTPLGSALLRPNPILARLLRAHG---APEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp CC-TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTT---CCCCCCC---------------
T ss_pred CC-CcccccCCCCHHHHHHHcCCcHHHHHHHHcC---CCcCcCCCcccccccccCCccc
Confidence 76 5889999999999999999999999999999 8999999999999999987653
No 27
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=9.4e-40 Score=266.18 Aligned_cols=225 Identities=20% Similarity=0.196 Sum_probs=203.2
Q ss_pred cCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHH
Q 037701 31 HEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWI 110 (358)
Q Consensus 31 ~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 110 (358)
..+.+|||.|+..|+ .+.++++ ++..+..++..+..|.||||+|+..|+.+++++|+++|++
T Consensus 4 ~~~~~~l~~A~~~g~---~~~v~~l---l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------ 65 (231)
T 3aji_A 4 CVSNIMICNLAYSGK---LDELKER---ILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP------------ 65 (231)
T ss_dssp CCSSSHHHHHHHHTC---HHHHHHH---HHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------------
T ss_pred ccccchHHHHHHhCC---HHHHHHH---HHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC------------
Confidence 457899999999999 5555555 4457777888999999999999999999999999999887
Q ss_pred HHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCC
Q 037701 111 RWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRH 190 (358)
Q Consensus 111 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~ 190 (358)
++..+..|.||||+|+.. ++.+++++|++.|++++..+..|.||||+|+..++.+++++|++.+.+ .+.++..
T Consensus 66 ---~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~ 138 (231)
T 3aji_A 66 ---VNDKDDAGWSPLHIAASA---GXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN-PDAKDHY 138 (231)
T ss_dssp ---SCCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred ---CCCcCCCCCCHHHHHHHc---CHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCC
Confidence 446788999999999877 999999999999999999999999999999999999999999999887 5678899
Q ss_pred CCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHH
Q 037701 191 GWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAM 270 (358)
Q Consensus 191 ~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~ 270 (358)
|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..++.+++++|++++++ ++.+|..|.||+++|+
T Consensus 139 g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~ 213 (231)
T 3aji_A 139 DATAMHRAAAKGNLKMVHILLFYKAS----TNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS-IYIENKEEKTPLQVAK 213 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHSC
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCC----ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHH
Confidence 99999999999999999999999854 777889999999999999999999999999876 4889999999999999
Q ss_pred HcCChhHHHHHhcCc
Q 037701 271 VSLRGGVLKSLLENP 285 (358)
Q Consensus 271 ~~~~~~~~~~Ll~~~ 285 (358)
..++.+++++|.+++
T Consensus 214 ~~~~~~i~~lL~~~~ 228 (231)
T 3aji_A 214 GGLGLILKRLAEGEE 228 (231)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHcccc
Confidence 999999999999876
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.1e-39 Score=262.54 Aligned_cols=210 Identities=20% Similarity=0.222 Sum_probs=177.6
Q ss_pred CCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcC--CCC
Q 037701 73 GDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENC--PSA 150 (358)
Q Consensus 73 g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~--~~~ 150 (358)
|.||||+|+..|+.+++++|++.++... ...+..|.||||+|+.. ++.+++++|++.| .++
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--------------~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~ 64 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLL--------------LQKDQDGRIPLHWSVSF---QAHEITSFLLSKMENVNL 64 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGT--------------TCCCTTSCCHHHHHHHT---TCHHHHHHHHHTCTTCCG
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCcccc--------------ccCCCCCCCHHHHHHHc---CCHHHHHHHHhccccccc
Confidence 6899999999999999999999887642 23688899999999765 8999999999998 555
Q ss_pred CC-CCCCCccHHHHHHhcCcHHHHHHHHHhC--CcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCC
Q 037701 151 DH-RGPDGLTTLHAAVICNAEDVIKLLLEKK--KILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDR 227 (358)
Q Consensus 151 ~~-~~~~~~t~l~~a~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 227 (358)
+. .+..|.||||+|+..++.+++++|++.+ .+ .+..+..|.||||+|+..++.+++++|++.|.+ ++..+..
T Consensus 65 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~ 139 (228)
T 2dzn_A 65 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS----VRIKDKF 139 (228)
T ss_dssp GGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----SCCCCTT
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC----ccccCCC
Confidence 55 6778899999999999999999999887 44 567788899999999999999999999988854 6778888
Q ss_pred CCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHh-cCccccccccCCCCCCChHHHHHH
Q 037701 228 GMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLL-ENPYVISLIHGRDKNGNTPLHVLA 306 (358)
Q Consensus 228 g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll-~~~~~~~~~~~~~~~g~tpL~~a~ 306 (358)
|.||||+|+..|+.+++++|++.++.+++.+|..|+||||+|+..++.+++++|+ ++| ++++.+|..|.|||++|+
T Consensus 140 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~g---a~~~~~~~~g~t~l~~A~ 216 (228)
T 2dzn_A 140 NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYG---AEYDLVDNKGAKAEDVAL 216 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---CCSCCBCTTSCBGGGGCS
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC---CCCCccCCCCCcHHHHHH
Confidence 9999999999999999999999885667888889999999999999999999999 777 788888889999999885
Q ss_pred H
Q 037701 307 A 307 (358)
Q Consensus 307 ~ 307 (358)
+
T Consensus 217 ~ 217 (228)
T 2dzn_A 217 N 217 (228)
T ss_dssp S
T ss_pred H
Confidence 4
No 29
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=9.1e-40 Score=274.08 Aligned_cols=222 Identities=16% Similarity=0.122 Sum_probs=126.7
Q ss_pred hhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHh
Q 037701 66 LLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILE 145 (358)
Q Consensus 66 ~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~ 145 (358)
++.+|..|.||||+|+..|+.+++++|+++|++.+ .. +|.||||+|+. .++.+++++|++
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------------~~--~g~t~L~~A~~---~g~~~~v~~Ll~ 83 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKN---------------LL--ENEFPLHQAAT---LEDTKIVKILLF 83 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGS---------------CC--TTCCHHHHHTT---SSSCHHHHHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC---------------CC--CCCCHHHHHHH---cCCHHHHHHHHH
Confidence 45556666666666666666666666666655521 12 35566666633 356666666666
Q ss_pred cCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCC-CCHHHHHHHcCCHHHHHHHhcCCCccccccccc
Q 037701 146 NCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHG-WTSLHHAAYLGHSNITSMMLKSEDDKIVALYKE 224 (358)
Q Consensus 146 ~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~-~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 224 (358)
.|++++..+..|.||||+|+..++.+++++|++.|++ .+.++..| .||||+|+..|+.+++++|++.+++. .
T Consensus 84 ~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~------~ 156 (285)
T 3kea_A 84 SGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST------F 156 (285)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG-GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT------C
T ss_pred CCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc------c
Confidence 6666666666666666666666666666666666555 34455555 56666666666666666666655431 1
Q ss_pred CC-CCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcH-HHHHHHcCChhHHHHHhcCccccccccCCCCCCChHH
Q 037701 225 DD-RGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNA-RHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPL 302 (358)
Q Consensus 225 ~~-~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~-l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL 302 (358)
+. .|.||||+|+..|+.+++++|++.+++ ++.++..|+|| ||+|+..++.+++++|+++| ++++.++.
T Consensus 157 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~g---ad~~~~~~------ 226 (285)
T 3kea_A 157 DLAILLSCIHITIKNGHVDMMILLLDYMTS-TNTNNSLLFIPDIKLAIDNKDIEMLQALFKYD---INIYSANL------ 226 (285)
T ss_dssp CCSTHHHHHHHHHHTTCHHHHHHHHHHHHH-TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSC---BCSTTTTG------
T ss_pred cccCCccHHHHHHHcChHHHHHHHHHcCCC-CCcccCCCCChHHHHHHHcCCHHHHHHHHHcC---CCCCCCCh------
Confidence 11 555666666666666666666665544 35555566665 66666666666666666665 55555542
Q ss_pred HHHHHhCCCCc-eeecCCcchHHH
Q 037701 303 HVLAAACRDSS-YFIVPDSDMYEA 325 (358)
Q Consensus 303 ~~a~~~~~~~~-~~Ll~~g~~~~~ 325 (358)
.|+..++.++ ++|+++|++++.
T Consensus 227 -~a~~~~~~~iv~~Ll~~g~~~~~ 249 (285)
T 3kea_A 227 -ENVLLDDAEIAKMIIEKHVEYKS 249 (285)
T ss_dssp -GGGTTTCHHHHHHHHHHHHHHTT
T ss_pred -hhhhcCCHHHHHHHHHcCCCCCC
Confidence 3344445555 666666665443
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=9e-40 Score=271.05 Aligned_cols=208 Identities=22% Similarity=0.241 Sum_probs=141.0
Q ss_pred hhhhcccccCCchhhhhhhhhhc---------cceeccCCCceehhhhccccccccc-hHHHHHHHHhhCccchhcccCC
Q 037701 3 PDLYRDAAKGEIEPFNEIAKDEL---------VSIATHEKNTVLHVNIASQQEGERV-STEFVEGILEMCPSLLLQVNDK 72 (358)
Q Consensus 3 ~~L~~A~~~g~~~~~~~ll~~~~---------~~~~~~~~~t~l~~a~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~ 72 (358)
++|+.||..|+.++|++||+.+. .+..+..+.||||.|+..+. .+ +++.|++ .+.+++.+|..
T Consensus 13 ~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~---~~~~v~~Ll~----~Gadvn~~d~~ 85 (269)
T 4b93_B 13 EKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAP---AQKRLAKVPA----SGLGVNVTSQD 85 (269)
T ss_dssp HHHHHHHHTTCHHHHHHHHTCC-----------------------------------------------CCCCTTCCCTT
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCC---HHHHHHHHHH----CCCCCCCcCCC
Confidence 57999999999999999998752 23466677888888887766 32 3444443 57778888888
Q ss_pred CCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCC
Q 037701 73 GDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADH 152 (358)
Q Consensus 73 g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~ 152 (358)
|.||||+|+..|+.++|++|++.|++ ++..+..|.||++.|+.. ++.++++.|++.|++++.
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~---------------~~~~~~~g~t~l~~a~~~---~~~~~~~~Ll~~g~~~n~ 147 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGAN---------------AGARNADQAVPLHLACQQ---GHFQVVKCLLDSNAKPNK 147 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCC---------------TTCCCTTCCCHHHHHHHH---TCHHHHHHHHHTTCCSCC
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCC---------------cCccCCCCCCcccccccc---ChHHHHHHHHHCCCCCCC
Confidence 88888888888888888888888776 335677788888888665 788888888888888888
Q ss_pred CCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHH
Q 037701 153 RGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTAL 232 (358)
Q Consensus 153 ~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l 232 (358)
++..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|++.|++ ++.+|..|+|||
T Consensus 148 ~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad----~~~~d~~G~TpL 222 (269)
T 4b93_B 148 KDLSGNTPLIYACSGGHHELVALLLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLLHGAS----VQVLNKRQRTAV 222 (269)
T ss_dssp CCTTCCCHHHHHHHTTCGGGHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC----SCCCCTTSCCSG
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHH
Confidence 888888888888888888888888877776 566777778888888888888888888877744 666777777888
Q ss_pred HHHHHcCc
Q 037701 233 HLAASQGY 240 (358)
Q Consensus 233 ~~a~~~~~ 240 (358)
|+|++++.
T Consensus 223 ~~A~~~~~ 230 (269)
T 4b93_B 223 DCAEQNSK 230 (269)
T ss_dssp GGSCTTCH
T ss_pred HHHHhCCc
Confidence 77776654
No 31
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=4e-38 Score=256.04 Aligned_cols=222 Identities=26% Similarity=0.334 Sum_probs=194.2
Q ss_pred CCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHH
Q 037701 33 KNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRW 112 (358)
Q Consensus 33 ~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 112 (358)
|+||||+|+..|+ .++++++++ .++...+..+..|.||||+|+..|+.+++++|+++|++.+
T Consensus 2 g~t~L~~A~~~g~---~~~v~~Ll~---~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~------------ 63 (228)
T 2dzn_A 2 SNYPLHQACMENE---FFKVQELLH---SKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN------------ 63 (228)
T ss_dssp -CCHHHHHHHTTC---HHHHHHHHH---HCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCC------------
T ss_pred CccHHHHHHHhCC---HHHHHHHHh---cCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc------------
Confidence 7899999999999 777776655 4666667789999999999999999999999999985433
Q ss_pred HHHh-hcccCCcHHHHHHHHHhCCcHHHHHHHHhcC--CCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccC
Q 037701 113 MLLV-ENEEKNTALHEAVQSAAKGSVEMVAEILENC--PSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDR 189 (358)
Q Consensus 113 ~~~~-~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~--~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~ 189 (358)
+.. .+..|.||||+|+.. ++.+++++|++.| ++++..+..|.||||+|+..++.+++++|++.|.+ .+.++.
T Consensus 64 -~~~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~ 138 (228)
T 2dzn_A 64 -LDDYPDDSGWTPFHIACSV---GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS-VRIKDK 138 (228)
T ss_dssp -GGGCCCTTSCCHHHHHHHH---CCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCT
T ss_pred -ccccCCCCCCCHHHHHHHc---CCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC-ccccCC
Confidence 223 778999999999877 9999999999998 88899999999999999999999999999999888 678899
Q ss_pred CCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHH-hhCCCCcccccCCCCcHHHH
Q 037701 190 HGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRII-RHCPESYSIVDNRGWNARHF 268 (358)
Q Consensus 190 ~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll-~~~~~~~~~~~~~g~t~l~~ 268 (358)
.|.||||+|+..|+.+++++|++.+. .+++.++..|.||||+|+..|+.+++++|+ +.+.+ ++.+|..|.||+++
T Consensus 139 ~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~-~~~~~~~g~t~l~~ 214 (228)
T 2dzn_A 139 FNQIPLHRAASVGSLKLIELLCGLGK---SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE-YDLVDNKGAKAEDV 214 (228)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTTTC---CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC-SCCBCTTSCBGGGG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCc---ccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC-CCccCCCCCcHHHH
Confidence 99999999999999999999999983 337778999999999999999999999999 77665 58899999999999
Q ss_pred HHHcCChhHHHHHhcC
Q 037701 269 AMVSLRGGVLKSLLEN 284 (358)
Q Consensus 269 a~~~~~~~~~~~Ll~~ 284 (358)
|+.. ++.++|+++
T Consensus 215 A~~~---~~~~~l~~~ 227 (228)
T 2dzn_A 215 ALNE---QVKKFFLNN 227 (228)
T ss_dssp CSST---THHHHHHTT
T ss_pred HHHH---HHHHHHHhc
Confidence 9654 566777653
No 32
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.4e-39 Score=271.48 Aligned_cols=245 Identities=14% Similarity=0.092 Sum_probs=215.9
Q ss_pred ccccCCchhhhhhhhhhccceeccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHHHhcCCcH
Q 037701 8 DAAKGEIEPFNEIAKDELVSIATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAKCRHPA 87 (358)
Q Consensus 8 A~~~g~~~~~~~ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~ 87 (358)
+++..+.+.+..+|..+.++..+..|.||||+|+..|+ .+++++|++ .+.+++.. +|.||||+|+..|+.+
T Consensus 6 ~i~~~~~~~v~~lL~~~~~~~~d~~g~t~L~~A~~~g~---~~~v~~Ll~----~g~~~~~~--~g~t~L~~A~~~g~~~ 76 (285)
T 3kea_A 6 RINTWKSKQLKSFLSSKDTFKADVHGHSASYYAIADNN---VRLVCTLLN----AGALKNLL--ENEFPLHQAATLEDTK 76 (285)
T ss_dssp TGGGCCHHHHHHHHHSTTTTCCCTTSCCHHHHHHHTTC---HHHHHHHHH----TTGGGSCC--TTCCHHHHHTTSSSCH
T ss_pred HHHhcCHHHHHHHHHhCCCCccCCCCCCHHHHHHHcCC---HHHHHHHHh----CCCCCCCC--CCCCHHHHHHHcCCHH
Confidence 56778888888888888999999999999999999999 888888877 46677766 4899999999999999
Q ss_pred HHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCC-ccHHHHHHh
Q 037701 88 VVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDG-LTTLHAAVI 166 (358)
Q Consensus 88 ~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~-~t~l~~a~~ 166 (358)
++++|+++|++ ++..+..|.||||+|+.. ++.+++++|++.|++++..+..| .||||+|+.
T Consensus 77 ~v~~Ll~~ga~---------------~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~ 138 (285)
T 3kea_A 77 IVKILLFSGLD---------------DSQFDDKGNTALYYAVDS---GNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVM 138 (285)
T ss_dssp HHHHHHHTTCC---------------TTCCCTTSCCHHHHHHHT---TCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHH
T ss_pred HHHHHHHCCCC---------------CCCcCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHH
Confidence 99999999988 446888999999999765 99999999999999999999999 799999999
Q ss_pred cCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCH-HHHHHHcCcHHHHH
Q 037701 167 CNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTA-LHLAASQGYERVVR 245 (358)
Q Consensus 167 ~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~-l~~a~~~~~~~~v~ 245 (358)
.++.+++++|+++++.... ...|.||||+|+..|+.+++++|++.| .+++..+..|.|| ||+|+..++.++++
T Consensus 139 ~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g----ad~n~~~~~g~t~~L~~A~~~~~~~~v~ 212 (285)
T 3kea_A 139 LNDVSIVSYFLSEIPSTFD--LAILLSCIHITIKNGHVDMMILLLDYM----TSTNTNNSLLFIPDIKLAIDNKDIEMLQ 212 (285)
T ss_dssp TTCHHHHHHHHTTSCTTCC--CSTHHHHHHHHHHTTCHHHHHHHHHHH----HHTCTTCCCBCCTTHHHHHHHTCHHHHH
T ss_pred cCCHHHHHHHHhCCCcccc--ccCCccHHHHHHHcChHHHHHHHHHcC----CCCCcccCCCCChHHHHHHHcCCHHHHH
Confidence 9999999999999887422 238999999999999999999999998 4588899999998 99999999999999
Q ss_pred HHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCC
Q 037701 246 RIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDK 296 (358)
Q Consensus 246 ~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 296 (358)
+|+++|++. +..+ +.|+..++.+++++|+++| ++++....
T Consensus 213 ~Ll~~gad~-~~~~-------~~a~~~~~~~iv~~Ll~~g---~~~~~~~~ 252 (285)
T 3kea_A 213 ALFKYDINI-YSAN-------LENVLLDDAEIAKMIIEKH---VEYKSDSY 252 (285)
T ss_dssp HHTTSCBCS-TTTT-------GGGGTTTCHHHHHHHHHHH---HHHTTCTT
T ss_pred HHHHcCCCC-CCCC-------hhhhhcCCHHHHHHHHHcC---CCCCCccc
Confidence 999998764 5555 3567799999999999999 56544443
No 33
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=260.88 Aligned_cols=228 Identities=19% Similarity=0.161 Sum_probs=171.6
Q ss_pred eeccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcch
Q 037701 28 IATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGV 107 (358)
Q Consensus 28 ~~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 107 (358)
..+..|.|+|+.|+..|+ .+++++|++ .+.+++..+..|.||||+|+..|+.+++++|++.|++...
T Consensus 4 ~~d~~~~~~l~~A~~~g~---~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~------ 70 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGI---YERCRELVE----AGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQ------ 70 (240)
T ss_dssp CCSCGGGCCHHHHHHTTC---HHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------
T ss_pred ccccccchHHHHHHHcCC---hHHHHHHHH----cCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchh------
Confidence 356677888888888888 777776666 4566777777888888888888888888888887766321
Q ss_pred hHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccc
Q 037701 108 DWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRER 187 (358)
Q Consensus 108 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~ 187 (358)
..+..|.||||+|+.. ++.+++++|++.|++++..+..|.||||+|+..++.+++++|++.+.+ .+..
T Consensus 71 --------~~~~~~~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~-~~~~ 138 (240)
T 3eu9_A 71 --------LGGDLNSTPLHWATRQ---GHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD-VDMM 138 (240)
T ss_dssp --------CBTTTTBCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCC
T ss_pred --------hcCCcCCChhHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC-cccc
Confidence 2344577888888766 788888888888888887777788888888888888888888877776 4566
Q ss_pred cCCCCCHHHHHHHcCC-HHHHHHHhcCCCcccccccccCC-CCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcH
Q 037701 188 DRHGWTSLHHAAYLGH-SNITSMMLKSEDDKIVALYKEDD-RGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNA 265 (358)
Q Consensus 188 ~~~~~t~l~~a~~~~~-~~~~~~Ll~~~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 265 (358)
+..|.||||+|+..++ .+++++|++.+.+ ++..+. .|.||||+|+..|+.+++++|++.+.+ ++.++..|.||
T Consensus 139 ~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 213 (240)
T 3eu9_A 139 DQNGMTPLMWAAYRTHSVDPTRLLLTFNVS----VNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN-VDAQNIKGESA 213 (240)
T ss_dssp CTTSCCHHHHHHHHCCSSTTHHHHHHTTCC----TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCBCTTSCBH
T ss_pred CCCCCcHHHHHHHhCChHHHHHHHHhcCCC----cchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCH
Confidence 7778888888886655 6777888877744 555554 677888888888888888888887655 46777788888
Q ss_pred HHHHHHcCChhHHHHHhcCc
Q 037701 266 RHFAMVSLRGGVLKSLLENP 285 (358)
Q Consensus 266 l~~a~~~~~~~~~~~Ll~~~ 285 (358)
+++|+..++.+++++|++.+
T Consensus 214 l~~A~~~~~~~~v~~L~~~~ 233 (240)
T 3eu9_A 214 LDLAKQRKNVWMINHLQEAR 233 (240)
T ss_dssp HHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHHcCcHHHHHHHHHhh
Confidence 88888888888888888766
No 34
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=8.4e-40 Score=277.00 Aligned_cols=252 Identities=23% Similarity=0.264 Sum_probs=209.5
Q ss_pred HHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCcc
Q 037701 80 AAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLT 159 (358)
Q Consensus 80 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t 159 (358)
++..++.+.++.++............+. ....+..+.|||+.|+.. ++.+++++|++.|++++..+..|.|
T Consensus 5 ~a~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~t~l~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~t 75 (299)
T 1s70_B 5 DAKQKRNEQLKRWIGSETDLEPPVVKRK------KTKVKFDDGAVFLAACSS---GDTEEVLRLLERGADINYANVDGLT 75 (299)
T ss_dssp HHHHHHHHHHHHHHHTTTSSCCSCCCCS------CCCCEECHHHHHHHHHHH---TCHHHHHHHHHHCCCTTCBCTTCCB
T ss_pred HHHHHHHHHHHHHHccccccccccccCc------ccccccCCccHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCC
Confidence 4555566666666655433221110000 112345678999999877 9999999999999999999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcC
Q 037701 160 TLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQG 239 (358)
Q Consensus 160 ~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 239 (358)
|||+|+..|+.+++++|++.|++ .+..+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..+
T Consensus 76 ~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~ 150 (299)
T 1s70_B 76 ALHQACIDDNVDMVKFLVENGAN-INQPDNEGWIPLHAAASCGYLDIAEYLISQGAH----VGAVNSEGDTPLDIAEEEA 150 (299)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHCCSHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC----CCCcCCCCCCHHHHHHhcc
Confidence 99999999999999999999888 577899999999999999999999999999855 7778999999999999999
Q ss_pred cHHHHHHHHhhCCCCc--------------------------ccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccC
Q 037701 240 YERVVRRIIRHCPESY--------------------------SIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHG 293 (358)
Q Consensus 240 ~~~~v~~Ll~~~~~~~--------------------------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 293 (358)
..++++.++.....++ ...+..|.||||+|+..|+.+++++|+++| ++++.
T Consensus 151 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---~d~~~ 227 (299)
T 1s70_B 151 MEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR---YDVNI 227 (299)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT---CCTTC
T ss_pred hHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC---CCCCC
Confidence 9999988776543332 235578999999999999999999999999 89999
Q ss_pred CCCCCChHHHHHHHhCCCCc-eeecCCcchHHHHhhCCCchhhHhhhCCCCcccccce
Q 037701 294 RDKNGNTPLHVLAAACRDSS-YFIVPDSDMYEAVNKQNTSVEHIVRYGYPELEVIPSL 350 (358)
Q Consensus 294 ~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L 350 (358)
+|..|.||||+|+..++..+ ++|++.|+|++.+|..|.||+++|.+ ...+.++.|
T Consensus 228 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~--~~~~~l~~l 283 (299)
T 1s70_B 228 KDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE--DILGYLEEL 283 (299)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS--GGGHHHHHH
T ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH--HHHHHHHHH
Confidence 99999999999999999999 99999999999999999999999965 334444433
No 35
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=2e-39 Score=274.74 Aligned_cols=263 Identities=19% Similarity=0.199 Sum_probs=214.7
Q ss_pred cccccCCchhhhhhhhhhc-cc---------eeccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCch
Q 037701 7 RDAAKGEIEPFNEIAKDEL-VS---------IATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTP 76 (358)
Q Consensus 7 ~A~~~g~~~~~~~ll~~~~-~~---------~~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~ 76 (358)
.+++.+..+.++.++.... +. ..+..|.||||.|+..|+ .+++++|++ .+.+++..+..|.||
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~---~~~v~~Ll~----~g~~~~~~~~~g~t~ 76 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGD---TEEVLRLLE----RGADINYANVDGLTA 76 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTC---HHHHHHHHH----HCCCTTCBCTTCCBH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCC---HHHHHHHHH----cCCCCcccCCCCCCH
Confidence 4677888888888888741 11 135567899999999999 888888876 367788999999999
Q ss_pred hHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCC
Q 037701 77 LHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPD 156 (358)
Q Consensus 77 Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~ 156 (358)
||+|+..|+.+++++|+++|++ ++..+..|.||||+|+.. ++.+++++|++.|++++..+..
T Consensus 77 L~~A~~~g~~~~v~~Ll~~ga~---------------~~~~~~~g~tpL~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~ 138 (299)
T 1s70_B 77 LHQACIDDNVDMVKFLVENGAN---------------INQPDNEGWIPLHAAASC---GYLDIAEYLISQGAHVGAVNSE 138 (299)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC---------------TTCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHcCCHHHHHHHHHCCCC---------------CCCCCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCCcCCC
Confidence 9999999999999999999988 446788999999999877 9999999999999999999999
Q ss_pred CccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHH
Q 037701 157 GLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAA 236 (358)
Q Consensus 157 ~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~ 236 (358)
|.||||+|+..++.+++++++.............+.+++. ..+..++..+.. .....+..|.||||+|+
T Consensus 139 g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~---~~~~~~~~g~t~L~~A~ 207 (299)
T 1s70_B 139 GDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIML--------RDARQWLNSGHI---NDVRHAKSGGTALHVAA 207 (299)
T ss_dssp SCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH--------HHHHHHHHHTCC---CCCCCTTTCCCHHHHHH
T ss_pred CCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHH--------HHHHHHHhccCc---chhhhcCCCCCHHHHHH
Confidence 9999999999999999999887655433333322222222 223344444432 23345678999999999
Q ss_pred HcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhC
Q 037701 237 SQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAAC 309 (358)
Q Consensus 237 ~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~ 309 (358)
..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|++..
T Consensus 208 ~~g~~~~v~~Ll~~g~d-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g---ad~~~~d~~g~t~l~~A~~~~ 276 (299)
T 1s70_B 208 AKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWGKEEACRILVENL---CDMEAVNKVGQTAFDVADEDI 276 (299)
T ss_dssp HHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCTTTSCCSGG
T ss_pred HCCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHHH
Confidence 99999999999998876 5889999999999999999999999999998 899999999999999996543
No 36
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.1e-37 Score=253.74 Aligned_cols=233 Identities=18% Similarity=0.185 Sum_probs=203.5
Q ss_pred hhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHh
Q 037701 66 LLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILE 145 (358)
Q Consensus 66 ~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~ 145 (358)
++..|..|.||||.|+..|+.+++++|++.|++ ++..+..|.||||+|+.. ++.+++++|++
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~ 63 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYD---------------VRQPDKENVTLLHWAAIN---NRIDLVKYYIS 63 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCC---------------TTCCCTTSCCHHHHHHHT---TCHHHHHHHHH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCC---------------cCCCCCCCCCHHHHHHHh---CCHHHHHHHHH
Confidence 345678899999999999999999999999887 446788999999999775 99999999999
Q ss_pred cCCCCCCCCC-CCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCccccccccc
Q 037701 146 NCPSADHRGP-DGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKE 224 (358)
Q Consensus 146 ~~~~~~~~~~-~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 224 (358)
.|.+++.... .|.||||+|+..++.+++++|++.|.+ .+..+..|.||||+|+..|+.+++++|++.+.+ ++..
T Consensus 64 ~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~----~~~~ 138 (240)
T 3eu9_A 64 KGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD----VDMM 138 (240)
T ss_dssp TTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCC
T ss_pred cCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC----cccc
Confidence 9998876554 489999999999999999999999887 567789999999999999999999999999854 7778
Q ss_pred CCCCCCHHHHHHHcCc-HHHHHHHHhhCCCCcccccC-CCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHH
Q 037701 225 DDRGMTALHLAASQGY-ERVVRRIIRHCPESYSIVDN-RGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPL 302 (358)
Q Consensus 225 ~~~g~t~l~~a~~~~~-~~~v~~Ll~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL 302 (358)
+..|.||||+|+..+. .+++++|++.+.+. +..+. .|.||||+|+..++.+++++|+++| ++++.+|..|.|||
T Consensus 139 ~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~l 214 (240)
T 3eu9_A 139 DQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV-NLGDKYHKNTALHWAVLAGNTTVISLLLEAG---ANVDAQNIKGESAL 214 (240)
T ss_dssp CTTSCCHHHHHHHHCCSSTTHHHHHHTTCCT-TCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT---CCTTCBCTTSCBHH
T ss_pred CCCCCcHHHHHHHhCChHHHHHHHHhcCCCc-chhhccCCCcHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCCHH
Confidence 8999999999997665 88999999988764 66665 8999999999999999999999998 88999999999999
Q ss_pred HHHHHhCCCCc-eeecCCcchHHH
Q 037701 303 HVLAAACRDSS-YFIVPDSDMYEA 325 (358)
Q Consensus 303 ~~a~~~~~~~~-~~Ll~~g~~~~~ 325 (358)
++|++.++..+ ++|++.|++...
T Consensus 215 ~~A~~~~~~~~v~~L~~~~~~~~~ 238 (240)
T 3eu9_A 215 DLAKQRKNVWMINHLQEARQAKGY 238 (240)
T ss_dssp HHHHHTTCHHHHHHHHHHC-----
T ss_pred HHHHHcCcHHHHHHHHHhhhccCc
Confidence 99999999988 999998887544
No 37
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2.3e-39 Score=276.95 Aligned_cols=275 Identities=14% Similarity=0.014 Sum_probs=192.9
Q ss_pred ccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhc---c
Q 037701 30 THEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELES---G 106 (358)
Q Consensus 30 ~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~---~ 106 (358)
+....+|+|. .. .+++++|++ .+++++..+..|.|+++ |+.++|++|+++|+++....-. .
T Consensus 20 ~~~~~~~~~~----~~---~dlv~~ll~----~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~ 83 (327)
T 1sw6_A 20 NDRTAGPIIT----FT---HDLTSDFLS----SPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLN 83 (327)
T ss_dssp -----CCEEE----CC---TTCCCSTTT----SSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-----------
T ss_pred ccccccchhh----hc---CchHHHHhh----CCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhh
Confidence 3445555653 33 455667665 57778888888888888 7888888888888765431000 0
Q ss_pred hhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCC-CCCCCccHHHHHHhcCcHHHHHHHHHhCCcccc
Q 037701 107 VDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADH-RGPDGLTTLHAAVICNAEDVIKLLLEKKKILTR 185 (358)
Q Consensus 107 ~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~-~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~ 185 (358)
.+.... -........+.+|.++.. ...++++.|++.|+++|. .+..|.||||+|+..|+.+++++|+++|++ .+
T Consensus 84 ~~~~~~-~~~~~~~~~~~~~~a~~~---~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-~n 158 (327)
T 1sw6_A 84 NDSSNR-NSEGGSSNQQQQHVSFDS---LLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-RL 158 (327)
T ss_dssp ---------------------CHHH---HHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TT
T ss_pred cccccc-cccccCCccchhHHHHHh---hHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CC
Confidence 000000 001122223445777654 677889999999999999 899999999999999999999999999888 56
Q ss_pred cccCCCCCHHHHHHHcCC---HHHHHHHhcCCCcccccccccCCCCCCHHHHHHH----cCcHHHHHHHHhhC-------
Q 037701 186 ERDRHGWTSLHHAAYLGH---SNITSMMLKSEDDKIVALYKEDDRGMTALHLAAS----QGYERVVRRIIRHC------- 251 (358)
Q Consensus 186 ~~~~~~~t~l~~a~~~~~---~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~----~~~~~~v~~Ll~~~------- 251 (358)
.++..|.||||+|+..|+ .++++.|++.+. .+++..+..|.||||+|+. .|+.+++++|++.+
T Consensus 159 ~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~---~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~ 235 (327)
T 1sw6_A 159 YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY---PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKK 235 (327)
T ss_dssp BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG---GGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHG
T ss_pred CcCCCCCCHHHHHHHhcccccHHHHHHHHHhhh---ccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcc
Confidence 889999999999999888 567777776652 2477788999999999998 88999999998873
Q ss_pred ------------CCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeecC
Q 037701 252 ------------PESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVP 318 (358)
Q Consensus 252 ------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~ 318 (358)
..+++.++..|.||||+|+. +++|+++ +++.+|..|+||||+|++.++..+ ++|++
T Consensus 236 ~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~-----~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~ 304 (327)
T 1sw6_A 236 QNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN-----MLNAQDSNGDTCLNIAARLGNISIVDALLD 304 (327)
T ss_dssp GGCCEEEC----------------CHHHHHCS------HHHHHHH-----TTTCCCTTSCCHHHHHHHHCCHHHHHHHHH
T ss_pred cchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh-----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 33457888999999999985 7888874 578899999999999999999888 99999
Q ss_pred CcchHHHHhhCCCchhhHhhh
Q 037701 319 DSDMYEAVNKQNTSVEHIVRY 339 (358)
Q Consensus 319 ~g~~~~~~~~~g~t~l~~a~~ 339 (358)
.|+|++.+|..|+|||++|+.
T Consensus 305 ~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 305 YGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp TTCCTTCCCTTSCCGGGGTCC
T ss_pred cCCCCcccCCCCCCHHHHHHh
Confidence 999999999999999999976
No 38
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-39 Score=278.06 Aligned_cols=268 Identities=14% Similarity=0.018 Sum_probs=189.3
Q ss_pred hhhcccccCCchhhhhhhhhh-ccceeccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHHHh
Q 037701 4 DLYRDAAKGEIEPFNEIAKDE-LVSIATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAK 82 (358)
Q Consensus 4 ~L~~A~~~g~~~~~~~ll~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~ 82 (358)
....++.....+++++|++.+ .++..+..|.|+++ |+ .++++.|++. +.+ .+.+++++|+.
T Consensus 22 ~~~~~~~~~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~---~~~v~~Ll~~----g~~------~~~~~~~~a~~ 83 (327)
T 1sw6_A 22 RTAGPIITFTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQ---KMKLEAFLQR----LLF------PEIQEMPTSLN 83 (327)
T ss_dssp ---CCEEECCTTCCCSTTTSSCCCEECBCCCCCCCH-----HH---HHHHHHHHHH----HHC-----------------
T ss_pred ccccchhhhcCchHHHHhhCCcccccCCCCCCcccC-----ch---hHHHHHHHHh----ccC------CccccchHhhh
Confidence 334455567788999999999 67779999999987 88 8888888773 332 23357777765
Q ss_pred cCCc-------HHHHHHHHHHHhhhHhhhcchhHHHHH------HHh-hcccCCcHHHHHHHHHhCCcHHHHHHHHhcCC
Q 037701 83 CRHP-------AVVEVLIKFAKKQSRELESGVDWIRWM------LLV-ENEEKNTALHEAVQSAAKGSVEMVAEILENCP 148 (358)
Q Consensus 83 ~~~~-------~~v~~Ll~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~ 148 (358)
.... ..-..+... + ......+....+ ++. .+..|.||||+|+.. ++.+++++|+++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~-a----~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~---g~~~~v~~Ll~~Ga 155 (327)
T 1sw6_A 84 NDSSNRNSEGGSSNQQQQHV-S----FDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSI---ANLELVKHLVKHGS 155 (327)
T ss_dssp ---------------------C----HHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHT---TCHHHHHHHHHTTC
T ss_pred cccccccccccCCccchhHH-H----HHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHc---CCHHHHHHHHHcCC
Confidence 4110 000000000 0 000001111111 233 788999999999765 99999999999999
Q ss_pred CCCCCCCCCccHHHHHHhcCc---HHHHHHHHHhCCcccccccCCCCCHHHHHHH----cCCHHHHHHHhcCCCc-----
Q 037701 149 SADHRGPDGLTTLHAAVICNA---EDVIKLLLEKKKILTRERDRHGWTSLHHAAY----LGHSNITSMMLKSEDD----- 216 (358)
Q Consensus 149 ~~~~~~~~~~t~l~~a~~~~~---~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~----~~~~~~~~~Ll~~~~~----- 216 (358)
+++.++..|.||||+|+..|+ .++++.|++.+....+.++..|.||||+|+. .|+.+++++|++.+..
T Consensus 156 d~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~ 235 (327)
T 1sw6_A 156 NRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKK 235 (327)
T ss_dssp CTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHG
T ss_pred CCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999998 6888888888755578899999999999999 8999999999987421
Q ss_pred -----------ccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCc
Q 037701 217 -----------KIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENP 285 (358)
Q Consensus 217 -----------~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 285 (358)
...+++..+..|.||||.|+. +++|++. +++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 236 ~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~G 306 (327)
T 1sw6_A 236 QNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYG 306 (327)
T ss_dssp GGCCEEEC----------------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTT
T ss_pred cchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 125678889999999999986 8999998 36789999999999999999999999999999
Q ss_pred cccccccCCCCCCChHHHHHHHhC
Q 037701 286 YVISLIHGRDKNGNTPLHVLAAAC 309 (358)
Q Consensus 286 ~~~~~~~~~~~~g~tpL~~a~~~~ 309 (358)
++++.+|..|+||||+|++.|
T Consensus 307 ---ad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 307 ---ADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp ---CCTTCCCTTSCCGGGGTCC--
T ss_pred ---CCCcccCCCCCCHHHHHHhcC
Confidence 999999999999999998654
No 39
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.1e-38 Score=255.74 Aligned_cols=214 Identities=22% Similarity=0.219 Sum_probs=189.2
Q ss_pred CCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHH
Q 037701 84 RHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHA 163 (358)
Q Consensus 84 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~ 163 (358)
|+.+++++|++.|++... ..+..|.||||+|+.. ++.+++++|++.|++++..+..|.||||+
T Consensus 2 g~~~~i~~Ll~~g~~~~~--------------~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 64 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHN--------------QTDRTGETALHLAARY---SRSDAAKRLLEASADANIQDNMGRTPLHA 64 (223)
T ss_dssp ---CCEETTEETTCCTTC--------------CCTTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CcHHHHHHHHHcCCCccc--------------ccCCCCCchHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 567888888888877431 3478899999999765 99999999999999999999999999999
Q ss_pred HHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHH
Q 037701 164 AVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERV 243 (358)
Q Consensus 164 a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 243 (358)
|+..++.+++++|++.++...+..+..|.||||+|+..++.+++++|++.+.+ ++..+..|.||||+|+..++.++
T Consensus 65 A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~ 140 (223)
T 2f8y_A 65 AVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD----VNAVDDLGKSALHWAAAVNNVDA 140 (223)
T ss_dssp HHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----TTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC----CcCcCCCCCcHHHHHHHcCCHHH
Confidence 99999999999999998866788899999999999999999999999998854 77788899999999999999999
Q ss_pred HHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeecCCcch
Q 037701 244 VRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVPDSDM 322 (358)
Q Consensus 244 v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~ 322 (358)
+++|++.+.+ ++.++..|.||||+|+..++.+++++|+++| ++++.+|..|.|||++|++.++.++ ++|++.|+.
T Consensus 141 v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 141 AVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHF---ANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp HHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred HHHHHHcCCC-CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC---CCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 9999999766 4788999999999999999999999999998 8889999999999999999999888 999998874
No 40
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=5.3e-37 Score=248.51 Aligned_cols=192 Identities=23% Similarity=0.308 Sum_probs=100.3
Q ss_pred cCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCC-
Q 037701 70 NDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCP- 148 (358)
Q Consensus 70 ~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~- 148 (358)
|..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+.. ++.+++++|++.+.
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~ 83 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEASAD---------------ANIQDNMGRTPLHAAVSA---DAQGVFQILIRNRAT 83 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCC---------------TTCCCTTSCCHHHHHHHT---TCHHHHHHHHHBTTS
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcCCC---------------CCCcCCCCCCHHHHHHHc---CCHHHHHHHHHcCCC
Confidence 44455555555555555555555555444 223444555555555433 55555555555543
Q ss_pred CCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCC
Q 037701 149 SADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRG 228 (358)
Q Consensus 149 ~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g 228 (358)
+++..+..|.||||+|+..++.+++++|++.+.+ .+.++..|.||||+|+..|+.+++++|++.|.+ ++..+..|
T Consensus 84 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g 158 (223)
T 2f8y_A 84 DLDARMHDGTTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN----KDMQNNRE 158 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTC
T ss_pred CcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC-CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCC
Confidence 4444455555555555555555555555555444 334445555555555555555555555555432 44445555
Q ss_pred CCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCc
Q 037701 229 MTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENP 285 (358)
Q Consensus 229 ~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 285 (358)
.||||+|+..++.+++++|++.+++ ++.++..|.||+++|+..++.+++++|+++|
T Consensus 159 ~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 159 ETPLFLAAREGSYETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCC-CccccccCCCHHHHHHHhcchHHHHHHHHcC
Confidence 5555555555555555555555443 2445555555555555555555555555555
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=5.8e-37 Score=250.42 Aligned_cols=219 Identities=21% Similarity=0.239 Sum_probs=151.7
Q ss_pred cccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcC
Q 037701 68 QVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENC 147 (358)
Q Consensus 68 ~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~ 147 (358)
.+|..|.||||+|+..|+.+++++|++.+...... ++..+..|.||||+|+.. ++.+++++|++.|
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-----------~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g 68 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAF-----------LNFQNNLQQTPLHLAVIT---NQPEIAEALLGAG 68 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCC-----------CCCCCTTCCCHHHHHHHT---TCHHHHHCCCSCC
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHH-----------hhccCCCCCCHHHHHHHc---CCHHHHHHHHHcC
Confidence 46788999999999999999999988876542110 345777888888888665 8888888888888
Q ss_pred CCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCc-----ccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCccccccc
Q 037701 148 PSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKI-----LTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALY 222 (358)
Q Consensus 148 ~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~-----~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 222 (358)
++++..+..|.||||+|+..++.+++++|++.+.. .....+..|.||||+|+..|+.+++++|++.|++ ++
T Consensus 69 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~ 144 (236)
T 1ikn_D 69 CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD----VN 144 (236)
T ss_dssp CCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC----TT
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CC
Confidence 88888888888888888888888888888887753 2345566677777777777777777777777643 55
Q ss_pred ccCC-CCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChH
Q 037701 223 KEDD-RGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTP 301 (358)
Q Consensus 223 ~~~~-~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tp 301 (358)
..+. .|.||||+|+..|+.+++++|++.+++ ++.++..|.||||+|+..++.+++++|+++|.. .....++..|.||
T Consensus 145 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~-~~~~~~~~~~~~~ 222 (236)
T 1ikn_D 145 AQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE-NLQMLPESEDEES 222 (236)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCC-SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG-GGSSCCCCCTTTC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcccCCCCCHHHHHHccCchHHHHHHHHcchh-hhhcCCccchHHH
Confidence 5555 677777777777777777777777655 366677777777777777777777777777732 1112455566666
Q ss_pred HHHHH
Q 037701 302 LHVLA 306 (358)
Q Consensus 302 L~~a~ 306 (358)
.+.+.
T Consensus 223 ~~~~~ 227 (236)
T 1ikn_D 223 YDTES 227 (236)
T ss_dssp CCCC-
T ss_pred Hhhhc
Confidence 54443
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2e-35 Score=240.68 Aligned_cols=191 Identities=23% Similarity=0.289 Sum_probs=126.9
Q ss_pred CCCchhHHHHhcCCcHHHHHHHHH-HHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCC
Q 037701 72 KGDTPLHVAAKCRHPAVVEVLIKF-AKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSA 150 (358)
Q Consensus 72 ~g~t~Lh~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~ 150 (358)
.|.||||+|+..|+.+++++|++. |++ ++..+..|.||||+|+.. ++.+++++|++.|+++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~---------------~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~ 63 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE---------------VHQRGAMGETALHIAALY---DNLEAAMVLMEAAPEL 63 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC---------------TTCCCTTSCCHHHHHHHT---TCHHHHHHHHHHCGGG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC---------------cccCCCCCCCHHHHHHHc---CCHHHHHHHHHcCchh
Confidence 367777777777777777777776 555 335667777777777554 7777777777777665
Q ss_pred -----CCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccC-------------CCCCHHHHHHHcCCHHHHHHHhc
Q 037701 151 -----DHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDR-------------HGWTSLHHAAYLGHSNITSMMLK 212 (358)
Q Consensus 151 -----~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~-------------~~~t~l~~a~~~~~~~~~~~Ll~ 212 (358)
+..+..|.||||+|+..++.+++++|++.|++. +.++. .|.||||+|+..|+.+++++|++
T Consensus 64 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 142 (232)
T 2rfa_A 64 VFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE 142 (232)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH
T ss_pred ccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 455566777777777777777777777776663 23322 56666666666666666666666
Q ss_pred CCCcccccccccCCCCCCHHHHHHHcCcHHHH----HHHHhhCCCCc-----ccccCCCCcHHHHHHHcCChhHHHHHhc
Q 037701 213 SEDDKIVALYKEDDRGMTALHLAASQGYERVV----RRIIRHCPESY-----SIVDNRGWNARHFAMVSLRGGVLKSLLE 283 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v----~~Ll~~~~~~~-----~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 283 (358)
.|++ ++.++..|.||||+|+..++.+++ ++|++.+++.. +.+|..|.||||+|+..|+.+++++|++
T Consensus 143 ~ga~----~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~ 218 (232)
T 2rfa_A 143 HGAD----IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQ 218 (232)
T ss_dssp TTCC----TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCC----CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 6633 555666666666666666666655 66666665432 3566666666666666666666666666
Q ss_pred Cc
Q 037701 284 NP 285 (358)
Q Consensus 284 ~~ 285 (358)
++
T Consensus 219 ~g 220 (232)
T 2rfa_A 219 KR 220 (232)
T ss_dssp HH
T ss_pred cC
Confidence 66
No 43
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1e-36 Score=248.89 Aligned_cols=218 Identities=21% Similarity=0.278 Sum_probs=185.3
Q ss_pred eeccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcch
Q 037701 28 IATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGV 107 (358)
Q Consensus 28 ~~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 107 (358)
..+.+|.||||+|+..|+ .+++++|++.....+.+++..+..|.||||+|+..|+.+++++|+++|++
T Consensus 3 ~~d~~g~t~L~~A~~~g~---~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------- 70 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEE---KALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD--------- 70 (236)
T ss_dssp ----CCCCTTHHHHHTTC---SSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC---------
T ss_pred cCCCCCCchhHHHHHcCC---hhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------
Confidence 368899999999999999 99998887765445557889999999999999999999999999999987
Q ss_pred hHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCC------CCCCCCCCccHHHHHHhcCcHHHHHHHHHhCC
Q 037701 108 DWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPS------ADHRGPDGLTTLHAAVICNAEDVIKLLLEKKK 181 (358)
Q Consensus 108 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~------~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~ 181 (358)
++..+..|.||||+|+.. ++.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|++.|+
T Consensus 71 ------~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 141 (236)
T 1ikn_D 71 ------PELRDFRGNTPLHLACEQ---GCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGA 141 (236)
T ss_dssp ------SCCCCTTCCCHHHHHHHH---TCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred ------CCCcCCCCCCHHHHHHHc---CCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 446788999999999877 999999999999876 46677889999999999999999999999998
Q ss_pred cccccccC-CCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCc-cccc
Q 037701 182 ILTRERDR-HGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESY-SIVD 259 (358)
Q Consensus 182 ~~~~~~~~-~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~-~~~~ 259 (358)
+. +.++. .|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|++++++.. ..++
T Consensus 142 ~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~ 216 (236)
T 1ikn_D 142 DV-NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD----VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPE 216 (236)
T ss_dssp CT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCC----SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCC
T ss_pred CC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCc
Confidence 84 55665 999999999999999999999999855 77889999999999999999999999999998653 3577
Q ss_pred CCCCcHHHHHHH
Q 037701 260 NRGWNARHFAMV 271 (358)
Q Consensus 260 ~~g~t~l~~a~~ 271 (358)
..|.|+...+..
T Consensus 217 ~~~~~~~~~~~~ 228 (236)
T 1ikn_D 217 SEDEESYDTESE 228 (236)
T ss_dssp CCTTTCCCCC--
T ss_pred cchHHHHhhhcc
Confidence 788887665543
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=3.3e-35 Score=239.41 Aligned_cols=199 Identities=20% Similarity=0.220 Sum_probs=174.1
Q ss_pred cCCcHHHHHHHHHhCCcHHHHHHHHhc-CCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCccc----ccccCCCCCH
Q 037701 120 EKNTALHEAVQSAAKGSVEMVAEILEN-CPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILT----RERDRHGWTS 194 (358)
Q Consensus 120 ~~~t~l~~a~~~~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~----~~~~~~~~t~ 194 (358)
.|.||||+|+.. ++.++++.|++. |++++.++..|.||||+|+..|+.+++++|++.+++.. ..++..|.||
T Consensus 2 ~g~t~L~~A~~~---g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~ 78 (232)
T 2rfa_A 2 IWESPLLLAAKE---NDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTA 78 (232)
T ss_dssp CTTCHHHHHHHT---TCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCH
T ss_pred CCCCHHHHHHHc---CCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCH
Confidence 478999999775 999999999998 99999999999999999999999999999999988743 4567799999
Q ss_pred HHHHHHcCCHHHHHHHhcCCCcccccccccC-------------CCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCC
Q 037701 195 LHHAAYLGHSNITSMMLKSEDDKIVALYKED-------------DRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNR 261 (358)
Q Consensus 195 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~-------------~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~ 261 (358)
||+|+..|+.+++++|++.|++ ++..+ ..|.||||+|+..|+.+++++|++.+++ ++.+|..
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~ 153 (232)
T 2rfa_A 79 LHIAVINQNVNLVRALLARGAS----VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD-IRAQDSL 153 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC----TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred HHHHHHcCCHHHHHHHHhCCCC----CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCC
Confidence 9999999999999999999865 33333 3799999999999999999999999876 5889999
Q ss_pred CCcHHHHHHHcCChhHH----HHHhcCccccccc------cCCCCCCChHHHHHHHhCCCCc-eeecCCcchHHHHhhC
Q 037701 262 GWNARHFAMVSLRGGVL----KSLLENPYVISLI------HGRDKNGNTPLHVLAAACRDSS-YFIVPDSDMYEAVNKQ 329 (358)
Q Consensus 262 g~t~l~~a~~~~~~~~~----~~Ll~~~~~~~~~------~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~~~~~~~~ 329 (358)
|.||||+|+..++.+++ ++|++++ ++. +.+|..|+||||+|+..++.++ ++|+++|++...+...
T Consensus 154 g~t~L~~A~~~~~~~~~~~i~~~Ll~~g---~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 229 (232)
T 2rfa_A 154 GNTVLHILILQPNKTFACQMYNLLLSYD---GGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAHHH 229 (232)
T ss_dssp SCCHHHHHHTCSCHHHHHHHHHHHHHTT---CSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC------
T ss_pred CCCHHHHHHHcCChHHHHHHHHHHHhcC---CchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhhhcc
Confidence 99999999999999988 9999988 554 5789999999999999999999 9999999876555443
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.3e-34 Score=230.47 Aligned_cols=194 Identities=20% Similarity=0.191 Sum_probs=159.9
Q ss_pred CCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCC
Q 037701 71 DKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSA 150 (358)
Q Consensus 71 ~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~ 150 (358)
..+.||||.|+..|+.++++.|+..+... ++..+..|.||||+|+.. ++.+++++|++.|+++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~--------------~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~ 65 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQ--------------VDEVDTEGNTPLNIAVHN---NDIEIAKALIDRGADI 65 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCC--------------TTCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCC--------------CCCCCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCC
Confidence 45788899999999998888888876521 445778888999998776 8888999999888888
Q ss_pred CCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCC
Q 037701 151 DHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMT 230 (358)
Q Consensus 151 ~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t 230 (358)
+..+..|.||||+|+..++.+++++|++.++...+..+..|.||||+|+..|+.+++++|++.+. .+++..+..|.|
T Consensus 66 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~~g~t 142 (201)
T 3hra_A 66 NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGR---EDIDFQNDFGYT 142 (201)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCC---CCTTCCCTTSCC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCC---CCcCCCCCCCCC
Confidence 88888888999999888888898888876665577788888888888888888888888888873 236677888888
Q ss_pred HHHHHHHcCc-----HHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCc
Q 037701 231 ALHLAASQGY-----ERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENP 285 (358)
Q Consensus 231 ~l~~a~~~~~-----~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 285 (358)
|||+|+..++ .+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|
T Consensus 143 ~L~~A~~~~~~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 143 ALIEAVGLREGNQLYQDIVKLLMENGAD-QSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHSSCCSHHHHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHHhccchhhHHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 8888888877 8888888888766 4778888888888888888888888888875
No 46
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1e-34 Score=242.36 Aligned_cols=211 Identities=20% Similarity=0.190 Sum_probs=135.8
Q ss_pred ceeccCCCceehhhhccccccccchHHHHHHHHhhCccchh----cccCCCCchhHHHHhc---CCcHHHHHHHHHHHhh
Q 037701 27 SIATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLL----QVNDKGDTPLHVAAKC---RHPAVVEVLIKFAKKQ 99 (358)
Q Consensus 27 ~~~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~g~t~Lh~A~~~---~~~~~v~~Ll~~~~~~ 99 (358)
+..+..|.||||.|+..|+ .++++.|++.....+..++ ..+..|.||||+|+.. |+.++|++|+++|++.
T Consensus 7 ~~~d~~g~t~L~~A~~~g~---~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~ 83 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSN---CQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKT 83 (273)
T ss_dssp ----CCCHHHHHHHHHTTC---SSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHT
T ss_pred CCCCcccchHHHHHHHcCC---HHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccc
Confidence 4478899999999999999 9999999886555555554 4588999999999986 9999999999999874
Q ss_pred hHhhhcchhHHHHHHHh----hcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCC--------------CCccHH
Q 037701 100 SRELESGVDWIRWMLLV----ENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGP--------------DGLTTL 161 (358)
Q Consensus 100 ~~~~~~~~~~~~~~~~~----~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~--------------~~~t~l 161 (358)
... ..+++. .+..|.||||+|+.. ++.+++++|++.|++++..+. .|.|||
T Consensus 84 ~~~--------~~~i~~~~~~~d~~g~tpL~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL 152 (273)
T 2pnn_A 84 DSL--------KQFVNASYTDSYYKGQTALHIAIER---RNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPL 152 (273)
T ss_dssp TCH--------HHHHTCCCCSTTTTTCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHH
T ss_pred cch--------hHHhhcccccccCCCCCHHHHHHHc---CCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHH
Confidence 321 111222 456788999999665 889999999999988888776 455555
Q ss_pred HHHHhcCcHHHHHHHHH---hCCcccccccCCCCCHHHHHHHcCC---------HHHHHHHhcCCCccccc---ccccCC
Q 037701 162 HAAVICNAEDVIKLLLE---KKKILTRERDRHGWTSLHHAAYLGH---------SNITSMMLKSEDDKIVA---LYKEDD 226 (358)
Q Consensus 162 ~~a~~~~~~~~v~~Ll~---~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~~~---~~~~~~ 226 (358)
|+|+..++.+++++|++ .|++ .+.++..|.||||+|+..++ .+++++|++.|++.... .+.++.
T Consensus 153 ~~A~~~g~~~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~ 231 (273)
T 2pnn_A 153 SLAACTNQLAIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNR 231 (273)
T ss_dssp HHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT
T ss_pred HHHHHcCCHHHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCC
Confidence 55555555555555555 4444 34455555555555555554 44555555544321000 012444
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHhhCC
Q 037701 227 RGMTALHLAASQGYERVVRRIIRHCP 252 (358)
Q Consensus 227 ~g~t~l~~a~~~~~~~~v~~Ll~~~~ 252 (358)
.|.||||+|+..|+.+++++|+++++
T Consensus 232 ~g~TpL~~A~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 232 KGLTPLALAASSGKIGVLAYILQREI 257 (273)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHhChHHHHHHHHHCCC
Confidence 45555555555555555555555544
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.9e-34 Score=228.57 Aligned_cols=192 Identities=22% Similarity=0.215 Sum_probs=169.4
Q ss_pred ccCCcHHHHHHHHHhCCcHHHHHHHHhcCC-CCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHH
Q 037701 119 EEKNTALHEAVQSAAKGSVEMVAEILENCP-SADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHH 197 (358)
Q Consensus 119 ~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~-~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~ 197 (358)
..+.||||.|+.. ++.+.++.|++.+. +++..+..|.||||+|+..++.+++++|++.|++ .+.++..|.||||+
T Consensus 3 ~~~~~~L~~A~~~---g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~ 78 (201)
T 3hra_A 3 TYEVGALLEAANQ---RDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-INLQNSISDSPYLY 78 (201)
T ss_dssp CCCTTHHHHHHHT---TCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred cccccHHHHHHHh---ccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHH
Confidence 4577999999665 99999999998876 8899999999999999999999999999999887 56788899999999
Q ss_pred HHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCC---
Q 037701 198 AAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLR--- 274 (358)
Q Consensus 198 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~--- 274 (358)
|+..|+.+++++|++.+. .+++..+..|.||||+|+..|+.+++++|++.++.+++.++..|.||||+|+..++
T Consensus 79 A~~~~~~~~~~~Ll~~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~ 155 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHAT---PDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQ 155 (201)
T ss_dssp HHHTTCHHHHHHHHHHSC---CCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSH
T ss_pred HHHcCCHHHHHHHHhccC---cccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchh
Confidence 999999999999995443 34777888899999999999999999999999866678899999999999999888
Q ss_pred --hhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeecCCc
Q 037701 275 --GGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVPDS 320 (358)
Q Consensus 275 --~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g 320 (358)
.+++++|+++| ++++.+|..|.||||+|++.++.++ ++|+++|
T Consensus 156 ~~~~~v~~Ll~~g---a~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 156 LYQDIVKLLMENG---ADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred hHHHHHHHHHHCC---CCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 89999999998 8889999999999999999998888 8888776
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.4e-34 Score=239.24 Aligned_cols=219 Identities=16% Similarity=0.115 Sum_probs=136.3
Q ss_pred CCCceehhhhccccccccchHHHHHHHHhhCccchhc----ccCCCCchhHHHHhc---CCcHHHHHHHHHHHhhhHhhh
Q 037701 32 EKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQ----VNDKGDTPLHVAAKC---RHPAVVEVLIKFAKKQSRELE 104 (358)
Q Consensus 32 ~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~g~t~Lh~A~~~---~~~~~v~~Ll~~~~~~~~~~~ 104 (358)
.|+||||.|+..|+ .+.++.+++.+...+.+++. .|..|.||||+|+.. |+.+++++|+++|++......
T Consensus 1 ~G~t~L~~A~~~g~---~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 77 (256)
T 2etb_A 1 FDRDRLFSVVSRGV---PEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKP 77 (256)
T ss_dssp CCHHHHHHHHHHTC---GGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSC
T ss_pred CCccHHHHHHHcCC---HHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhh
Confidence 37899999999999 88777666655556777887 899999999999999 999999999999988532100
Q ss_pred cchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCccc
Q 037701 105 SGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILT 184 (358)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~ 184 (358)
. +.......+..|.||||+|+.. ++.+++++|++.|++++..+..+.++ ...
T Consensus 78 ~----~~~~~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~~~~~---------------------~~~ 129 (256)
T 2etb_A 78 L----VNAQCTDEFYQGHSALHIAIEK---RSLQCVKLLVENGADVHLRACGRFFQ---------------------KHQ 129 (256)
T ss_dssp G----GGCCCCSTTTTTCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCCSGGGS---------------------CCS
T ss_pred h----cccccccccccCCCHHHHHHHc---CCHHHHHHHHHcCCCCCccccccccc---------------------ccc
Confidence 0 0000001346789999999765 89999999999999988887762210 001
Q ss_pred ccccCCCCCHHHHHHHcCCHHHHHHHhc---CCCcccccccccCCCCCCHHHHHHH--cCcHH-------HHHHHHhhCC
Q 037701 185 RERDRHGWTSLHHAAYLGHSNITSMMLK---SEDDKIVALYKEDDRGMTALHLAAS--QGYER-------VVRRIIRHCP 252 (358)
Q Consensus 185 ~~~~~~~~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~g~t~l~~a~~--~~~~~-------~v~~Ll~~~~ 252 (358)
...+..|.||||+|+..|+.+++++|++ .|+ +++.++..|+||||+|+. .++.+ ++++|++.++
T Consensus 130 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga----~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga 205 (256)
T 2etb_A 130 GTCFYFGELPLSLAACTKQWDVVTYLLENPHQPA----SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGA 205 (256)
T ss_dssp SSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC----CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhccccCC----CcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCC
Confidence 1122234455555555555555555554 342 244444455555555554 44444 5555555543
Q ss_pred CCc------ccccCCCCcHHHHHHHcCChhHHHHHhcCc
Q 037701 253 ESY------SIVDNRGWNARHFAMVSLRGGVLKSLLENP 285 (358)
Q Consensus 253 ~~~------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 285 (358)
+.. +.+|..|.||||+|+..|+.+++++|+++|
T Consensus 206 ~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 206 RLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp HHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 311 445555555555555555555555555554
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=6.2e-35 Score=243.68 Aligned_cols=210 Identities=19% Similarity=0.201 Sum_probs=136.5
Q ss_pred cchhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHH
Q 037701 64 SLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEI 143 (358)
Q Consensus 64 ~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~L 143 (358)
+..+..|..|.||||.|+..|+.++|+.|++.+.......... ....+..|.||||+|+.....++.+++++|
T Consensus 4 a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-------~~~~~~~g~tpL~~A~~~~~~g~~~~v~~L 76 (273)
T 2pnn_A 4 AGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDS-------EFKDPETGKTCLLKAMLNLHNGQNDTIALL 76 (273)
T ss_dssp -------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSG-------GGSCTTTCCCHHHHHHHSCBTTBCHHHHHH
T ss_pred ccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCc-------ccccCcCCCCHHHHHHHHHhcCChHHHHHH
Confidence 3355688899999999999999999999999876533211000 002477899999999753234889999999
Q ss_pred HhcCCCC-------CC----CCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccC--------------CCCCHHHHH
Q 037701 144 LENCPSA-------DH----RGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDR--------------HGWTSLHHA 198 (358)
Q Consensus 144 l~~~~~~-------~~----~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~--------------~~~t~l~~a 198 (358)
++.|+++ +. .+..|.||||+|+..++.+++++|++.|++ .+.++. .|.||||+|
T Consensus 77 l~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A 155 (273)
T 2pnn_A 77 LDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQAAANGDFFKKTKGRPGFYFGELPLSLA 155 (273)
T ss_dssp HHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHH
T ss_pred HHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccccccccccccccccccCCCCHHHHH
Confidence 9987542 21 455788888888888888888888888776 344444 466666666
Q ss_pred HHcCCHHHHHHHhc---CCCcccccccccCCCCCCHHHHHHHcCc---------HHHHHHHHhhCCCCc------ccccC
Q 037701 199 AYLGHSNITSMMLK---SEDDKIVALYKEDDRGMTALHLAASQGY---------ERVVRRIIRHCPESY------SIVDN 260 (358)
Q Consensus 199 ~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~g~t~l~~a~~~~~---------~~~v~~Ll~~~~~~~------~~~~~ 260 (358)
+..|+.+++++|++ .|. +++.++..|+||||+|+..++ .+++++|++.+++.. +.+|.
T Consensus 156 ~~~g~~~~v~~Ll~~~~~ga----d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~ 231 (273)
T 2pnn_A 156 ACTNQLAIVKFLLQNSWQPA----DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNR 231 (273)
T ss_dssp HHTTCHHHHHHHHHCSSCCC----CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT
T ss_pred HHcCCHHHHHHHHhcccCCC----CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCC
Confidence 66666666666666 453 355556666666666666555 556666666554321 23556
Q ss_pred CCCcHHHHHHHcCChhHHHHHhcCc
Q 037701 261 RGWNARHFAMVSLRGGVLKSLLENP 285 (358)
Q Consensus 261 ~g~t~l~~a~~~~~~~~~~~Ll~~~ 285 (358)
.|.||||+|+..|+.+++++|+++|
T Consensus 232 ~g~TpL~~A~~~g~~~iv~~Ll~~g 256 (273)
T 2pnn_A 232 KGLTPLALAASSGKIGVLAYILQRE 256 (273)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHhChHHHHHHHHHCC
Confidence 6666666666666666666666666
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.8e-34 Score=238.57 Aligned_cols=198 Identities=20% Similarity=0.178 Sum_probs=169.4
Q ss_pred CCcHHHHHHHHHhCCcHH----HHHHHHhcCCCCCC----CCCCCccHHHHHHhc---CcHHHHHHHHHhCCcccc----
Q 037701 121 KNTALHEAVQSAAKGSVE----MVAEILENCPSADH----RGPDGLTTLHAAVIC---NAEDVIKLLLEKKKILTR---- 185 (358)
Q Consensus 121 ~~t~l~~a~~~~~~~~~~----~~~~Ll~~~~~~~~----~~~~~~t~l~~a~~~---~~~~~v~~Ll~~~~~~~~---- 185 (358)
|.||||.|+.. ++.+ ++++|++.|++++. .+..|.||||+|+.. |+.+++++|++.|+....
T Consensus 2 G~t~L~~A~~~---g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 78 (256)
T 2etb_A 2 DRDRLFSVVSR---GVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL 78 (256)
T ss_dssp CHHHHHHHHHH---TCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred CccHHHHHHHc---CCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence 67999999887 8886 77888889999998 899999999999999 999999999998876432
Q ss_pred ------cccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCC-------------CCCHHHHHHHcCcHHHHHH
Q 037701 186 ------ERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDR-------------GMTALHLAASQGYERVVRR 246 (358)
Q Consensus 186 ------~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-------------g~t~l~~a~~~~~~~~v~~ 246 (358)
.++..|.||||+|+..|+.+++++|++.|++ ++..+.. |.||||+|+..|+.+++++
T Consensus 79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~----~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~ 154 (256)
T 2etb_A 79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD----VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTY 154 (256)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHH
T ss_pred cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC----CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 1346799999999999999999999999865 5556654 9999999999999999999
Q ss_pred HHh---hCCCCcccccCCCCcHHHHHHH--cCChh-------HHHHHhcCccccccc-------cCCCCCCChHHHHHHH
Q 037701 247 IIR---HCPESYSIVDNRGWNARHFAMV--SLRGG-------VLKSLLENPYVISLI-------HGRDKNGNTPLHVLAA 307 (358)
Q Consensus 247 Ll~---~~~~~~~~~~~~g~t~l~~a~~--~~~~~-------~~~~Ll~~~~~~~~~-------~~~~~~g~tpL~~a~~ 307 (358)
|++ .+.+ ++.+|..|+||||+|+. .++.+ ++++|+++| +++ +.+|..|+||||+|+.
T Consensus 155 Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g---a~~~~~~~~~~~~d~~g~tpL~~A~~ 230 (256)
T 2etb_A 155 LLENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG---ARLCPTVQLEEISNHQGLTPLKLAAK 230 (256)
T ss_dssp HHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH---HHHSTTCCGGGCCCTTSCCHHHHHHH
T ss_pred HHhccccCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC---CCcccccccccccCCCCCCHHHHHHH
Confidence 999 6655 58889999999999998 77777 999999988 777 8899999999999999
Q ss_pred hCCCCc-eeecCCcchHHHHhhC
Q 037701 308 ACRDSS-YFIVPDSDMYEAVNKQ 329 (358)
Q Consensus 308 ~~~~~~-~~Ll~~g~~~~~~~~~ 329 (358)
.++..+ ++|+++|++.......
T Consensus 231 ~g~~~~v~~Ll~~g~~~~~~~~~ 253 (256)
T 2etb_A 231 EGKIEIFRHILQREFSGAAAHHH 253 (256)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHC-
T ss_pred hCCHHHHHHHHhCCCCCCCcccc
Confidence 999888 9999999887665543
No 51
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.3e-33 Score=215.19 Aligned_cols=158 Identities=29% Similarity=0.421 Sum_probs=130.6
Q ss_pred cHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcC
Q 037701 123 TALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLG 202 (358)
Q Consensus 123 t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~ 202 (358)
++|+.|++. |+.++++.|++.|+++|.++..|.||||+|+..++.+++++|++.|++ .+.++..|.||||+|+..|
T Consensus 6 ~~L~~Aa~~---G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-~~~~d~~g~TpLh~A~~~g 81 (169)
T 4gpm_A 6 KRLIEAAEN---GNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENG 81 (169)
T ss_dssp HHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHc---CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-hhhhccCCCCHHHHHHHcC
Confidence 578888654 889999999999999988888899999999999999999998888877 5677888888888888888
Q ss_pred CHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHh
Q 037701 203 HSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLL 282 (358)
Q Consensus 203 ~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 282 (358)
+.+++++|++.|++ ++.++..|+||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+
T Consensus 82 ~~~~v~~Ll~~gad----vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 82 HKEVVKLLISKGAD----VNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNTSDSDGRTPLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp CHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHCcCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 88888888888854 777888888888888888888888888888776 4778888888888888888888888888
Q ss_pred cCcccccccc
Q 037701 283 ENPYVISLIH 292 (358)
Q Consensus 283 ~~~~~~~~~~ 292 (358)
++| ++++
T Consensus 157 ~~G---A~ie 163 (169)
T 4gpm_A 157 KQG---GWLE 163 (169)
T ss_dssp TC--------
T ss_pred HCC---CCcC
Confidence 888 6653
No 52
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.4e-32 Score=210.83 Aligned_cols=159 Identities=26% Similarity=0.351 Sum_probs=144.8
Q ss_pred cHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHc
Q 037701 159 TTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQ 238 (358)
Q Consensus 159 t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~ 238 (358)
++|+.|++.|+.++|++|++.|++ ++.++..|.|||++|+..++.+++++|++.|.+ ++.++..|+||||+|+..
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad-vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad----~~~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD-VNASDSDGRTPLHHAAENGHKEVVKLLISKGAD----VNAKDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc----hhhhccCCCCHHHHHHHc
Confidence 579999999999999999999988 678999999999999999999999999999855 788899999999999999
Q ss_pred CcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeec
Q 037701 239 GYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIV 317 (358)
Q Consensus 239 ~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll 317 (358)
|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|++.++.++ ++|+
T Consensus 81 g~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g---ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 81 GHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKG---ADVNTSDSDGRTPLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999999999876 5889999999999999999999999999999 8999999999999999999999999 9999
Q ss_pred CCcchHHHH
Q 037701 318 PDSDMYEAV 326 (358)
Q Consensus 318 ~~g~~~~~~ 326 (358)
++||+++..
T Consensus 157 ~~GA~ie~~ 165 (169)
T 4gpm_A 157 KQGGWLEHH 165 (169)
T ss_dssp TC-------
T ss_pred HCCCCcCCC
Confidence 999998753
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=4.4e-33 Score=230.80 Aligned_cols=211 Identities=20% Similarity=0.191 Sum_probs=136.9
Q ss_pred ccCCCceehhhhccccccccchHHHHHHHHhhCccchhccc----CCCCchhHHHH---hcCCcHHHHHHHHHHHhhhHh
Q 037701 30 THEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVN----DKGDTPLHVAA---KCRHPAVVEVLIKFAKKQSRE 102 (358)
Q Consensus 30 ~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~g~t~Lh~A~---~~~~~~~v~~Ll~~~~~~~~~ 102 (358)
+..+.++||.|+..|+ .+.++.+++.+...+..++..+ ..|.||||+|+ ..|+.+++++|++.|++....
T Consensus 2 ~~~~~~~L~~A~~~g~---~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~ 78 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGS---PDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM 78 (260)
T ss_dssp CCCCHHHHHHHHHHTC---GGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH
T ss_pred ccchHHHHHHHHHhCC---HHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch
Confidence 4568899999999999 8888877776555566676655 67999999999 779999999999999874321
Q ss_pred hhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCC--------------CCCccHHHHHHhcC
Q 037701 103 LESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRG--------------PDGLTTLHAAVICN 168 (358)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~--------------~~~~t~l~~a~~~~ 168 (358)
.. .....+...+..|.||||+|+.. ++.+++++|++.|++++..+ ..|.||||+|+..|
T Consensus 79 ~~----~~~~~~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g 151 (260)
T 3jxi_A 79 RE----FINSPFRDVYYRGQTALHIAIER---RCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTN 151 (260)
T ss_dssp HH----HHTCCBCCSSEESBCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTT
T ss_pred Hh----hhcccccccccCCCCHHHHHHHc---CCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcC
Confidence 10 00000123445788888888665 88888888888888888777 35666666666666
Q ss_pred cHHHHHHHHH---hCCcccccccCCCCCHHHHHHHcCC---------HHHHHHHhcCCCccccc---ccccCCCCCCHHH
Q 037701 169 AEDVIKLLLE---KKKILTRERDRHGWTSLHHAAYLGH---------SNITSMMLKSEDDKIVA---LYKEDDRGMTALH 233 (358)
Q Consensus 169 ~~~~v~~Ll~---~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~~~---~~~~~~~g~t~l~ 233 (358)
+.+++++|++ .|++ .+.++..|.||||+|+..++ .+++++|++.|++.... .+..+..|.||||
T Consensus 152 ~~~~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 230 (260)
T 3jxi_A 152 QPHIVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLM 230 (260)
T ss_dssp CHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHH
T ss_pred CHHHHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHH
Confidence 6666666666 4444 44555566666666665554 45555555555331000 0334555555555
Q ss_pred HHHHcCcHHHHHHHHhhC
Q 037701 234 LAASQGYERVVRRIIRHC 251 (358)
Q Consensus 234 ~a~~~~~~~~v~~Ll~~~ 251 (358)
+|+..|+.+++++|++++
T Consensus 231 ~A~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 231 MAAKTGKIGIFQHIIRRE 248 (260)
T ss_dssp HHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHhC
Confidence 555555555555555554
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.98 E-value=1.6e-32 Score=227.40 Aligned_cols=197 Identities=19% Similarity=0.181 Sum_probs=155.5
Q ss_pred cccCCcHHHHHHHHHhCCcHHH----HHHHHhcCCCCCCCC----CCCccHHHHHH---hcCcHHHHHHHHHhCCcc---
Q 037701 118 NEEKNTALHEAVQSAAKGSVEM----VAEILENCPSADHRG----PDGLTTLHAAV---ICNAEDVIKLLLEKKKIL--- 183 (358)
Q Consensus 118 ~~~~~t~l~~a~~~~~~~~~~~----~~~Ll~~~~~~~~~~----~~~~t~l~~a~---~~~~~~~v~~Ll~~~~~~--- 183 (358)
+..+.++||.|++. ++.+. +++|++.+.+++..+ ..|.||||+|+ ..|+.+++++|++.++..
T Consensus 2 ~~~~~~~L~~A~~~---g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~ 78 (260)
T 3jxi_A 2 KVFNRPILFDIVSR---GSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM 78 (260)
T ss_dssp CCCCHHHHHHHHHH---TCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH
T ss_pred ccchHHHHHHHHHh---CCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch
Confidence 34677999999877 88884 555555898888655 66999999998 679999999999987532
Q ss_pred -------cccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccC--------------CCCCCHHHHHHHcCcHH
Q 037701 184 -------TRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKED--------------DRGMTALHLAASQGYER 242 (358)
Q Consensus 184 -------~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~--------------~~g~t~l~~a~~~~~~~ 242 (358)
....+..|.||||+|+..|+.+++++|++.|++ ++..+ ..|.||||+|+..|+.+
T Consensus 79 ~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~----~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 154 (260)
T 3jxi_A 79 REFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD----VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPH 154 (260)
T ss_dssp HHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHH
T ss_pred HhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC----cCccccccccCcccccccccCCCCHHHHHHHcCCHH
Confidence 233445788999999999999999999988854 55555 57888888888888888
Q ss_pred HHHHHHh---hCCCCcccccCCCCcHHHHHHHcCC---------hhHHHHHhcCccccccc-------cCCCCCCChHHH
Q 037701 243 VVRRIIR---HCPESYSIVDNRGWNARHFAMVSLR---------GGVLKSLLENPYVISLI-------HGRDKNGNTPLH 303 (358)
Q Consensus 243 ~v~~Ll~---~~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~~~-------~~~~~~g~tpL~ 303 (358)
++++|++ .+.+ ++.+|..|+||||+|+..++ .+++++|+++| +++ +.+|..|.||||
T Consensus 155 ~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g---a~~~~~~~~~~~~d~~g~tpL~ 230 (260)
T 3jxi_A 155 IVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC---AKLFPDTNLEALLNNDGLSPLM 230 (260)
T ss_dssp HHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH---HHHCTTCCGGGCCCTTSCCHHH
T ss_pred HHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC---cccccccchhhcccCCCCCHHH
Confidence 8888888 5554 57788888888888888777 58888888887 666 668888888888
Q ss_pred HHHHhCCCCc-eeecCCcchHHH
Q 037701 304 VLAAACRDSS-YFIVPDSDMYEA 325 (358)
Q Consensus 304 ~a~~~~~~~~-~~Ll~~g~~~~~ 325 (358)
+|++.++..+ ++|+++|++...
T Consensus 231 ~A~~~g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 231 MAAKTGKIGIFQHIIRREIADAA 253 (260)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHHhCCCccc
Confidence 8888888888 888888876543
No 55
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=2.6e-31 Score=221.54 Aligned_cols=193 Identities=19% Similarity=0.235 Sum_probs=169.6
Q ss_pred CCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCC-CC
Q 037701 72 KGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCP-SA 150 (358)
Q Consensus 72 ~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~-~~ 150 (358)
.+.+++|.|+..++.+.++.+++.+.+.. ++..|..|.||||+|+.. ++.+++++|++.|+ ++
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~-------------~n~~d~~g~T~Lh~A~~~---g~~~~v~~Ll~~g~~~~ 138 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSARLLDYV-------------VNIADSNGNTALHYSVSH---ANFPVVQQLLDSGVCKV 138 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCHHHHHHH-------------HTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTSCCCT
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHhhc-------------CcCCCCCCCCHHHHHHHC---CCHHHHHHHHHCCCCcC
Confidence 35688999999999999999998876532 567899999999999765 99999999999998 99
Q ss_pred CCCCCCCccHHHHHH-----hcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccC
Q 037701 151 DHRGPDGLTTLHAAV-----ICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKED 225 (358)
Q Consensus 151 ~~~~~~~~t~l~~a~-----~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 225 (358)
+..+..|.||||+|+ ..++.+++++|++.|.. ....+..|.||||+|+..|+.+++++|++.|++ ++.++
T Consensus 139 ~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad----~n~~d 213 (276)
T 4hbd_A 139 DKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNI-NAKASQAGQTALMLAVSHGRVDVVKALLACEAD----VNVQD 213 (276)
T ss_dssp TCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCC
T ss_pred CCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC----CCCCC
Confidence 999999999999999 56889999999999876 567788899999999999999999999999855 77789
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCc
Q 037701 226 DRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENP 285 (358)
Q Consensus 226 ~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 285 (358)
..|.||||+|+..|+.+++++|++..+.+++.+|..|.||||+|+..|+.+++++|+++.
T Consensus 214 ~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 214 DDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999999999999999999434446889999999999999999999999999865
No 56
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=7.1e-31 Score=207.24 Aligned_cols=163 Identities=25% Similarity=0.258 Sum_probs=120.9
Q ss_pred chhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHH
Q 037701 65 LLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEIL 144 (358)
Q Consensus 65 ~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll 144 (358)
.++.+|..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+.. ++.+++++|+
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---------------~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll 88 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK---------------LEDKDIEGSTALIWAVKN---NRLGIAEKLL 88 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC---------------TTCCCTTSCCHHHHHHHT---TCHHHHHHHH
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc---------------cccccccCccHHHHHHHc---CCHHHHHHHH
Confidence 3566777888888888888888888888887766 335677778888888654 7788888888
Q ss_pred hcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCccccccccc
Q 037701 145 ENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKE 224 (358)
Q Consensus 145 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 224 (358)
+.|++++..+..|.||||+|+..++.+++++|++.|++ .+.++..|.||||+|+..|+.+++++|++.|++ ++.+
T Consensus 89 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~ 163 (192)
T 2rfm_A 89 SKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGAD----ISAR 163 (192)
T ss_dssp HHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----TTCB
T ss_pred HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCc
Confidence 88877777777777888887777777777777777766 456667777777777777777777777777643 5556
Q ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhh
Q 037701 225 DDRGMTALHLAASQGYERVVRRIIRH 250 (358)
Q Consensus 225 ~~~g~t~l~~a~~~~~~~~v~~Ll~~ 250 (358)
+..|.||+++|+..|+.+++++|++.
T Consensus 164 ~~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 164 DLTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp CTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 67777777777777777777777665
No 57
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.97 E-value=1.3e-34 Score=249.66 Aligned_cols=271 Identities=15% Similarity=0.072 Sum_probs=172.0
Q ss_pred CCceehhhhc-cccccccchHHHHHHHHhhCccchhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHH
Q 037701 33 KNTVLHVNIA-SQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIR 111 (358)
Q Consensus 33 ~~t~l~~a~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 111 (358)
+.+++++|.. .+. .+.++++.. .+.++.||||+|+..|+.++|++|++.|+....
T Consensus 65 ~ll~~~~a~~~~~~---~~~~~~l~~-----------~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~---------- 120 (376)
T 2aja_A 65 QLLCLYYAHYNRNA---KQLWSDAHK-----------KGIKSEVICFVAAITGCSSALDTLCLLLTSDEI---------- 120 (376)
T ss_dssp HHHHHHHHHTTTTC---TTHHHHHHH-----------HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSS----------
T ss_pred HHHHHHHHHhcCCC---HHHHHHHHH-----------cCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHH----------
Confidence 3455666655 344 556666554 234456999999999999999999988872110
Q ss_pred HHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCC---CCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccc-cc
Q 037701 112 WMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSA---DHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTR-ER 187 (358)
Q Consensus 112 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~---~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~-~~ 187 (358)
....+..+.||||+|+.. |+.+++++|+++|+++ +..+.+ .||||+|+..|+.+++++|+++|++... ..
T Consensus 121 --~~~~~~~~~tpL~~Aa~~---G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~ 194 (376)
T 2aja_A 121 --VKVIQAENYQAFRLAAEN---GHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMI 194 (376)
T ss_dssp --CC--CHHHHHHHHHHHHT---TCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHH
T ss_pred --HHHhccCCCCHHHHHHHc---CCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhcc
Confidence 012344566899999665 9999999999998752 222333 8899999999999999999998877332 26
Q ss_pred cCCCCCHHHHHH-HcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHH
Q 037701 188 DRHGWTSLHHAA-YLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNAR 266 (358)
Q Consensus 188 ~~~~~t~l~~a~-~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l 266 (358)
+..|.||||+|+ ..|+.+++++|++.|+ .|.||++.|+..|+.+++++|++.+++. +..+ +++
T Consensus 195 d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-----------~~~taL~~Aa~~g~~evv~lL~~~ga~~-~~~~----~~l 258 (376)
T 2aja_A 195 QAENYYAFRWAAVGRGHHNVINFLLDCPV-----------MLAYAEIHEFEYGEKYVNPFIARHVNRL-KEMH----DAF 258 (376)
T ss_dssp HHHHHHHHHHHHSTTCCHHHHHHHTTSHH-----------HHHHHHHCTTTTTTTTHHHHHHHHHHHH-HHHH----TTT
T ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHhCCC-----------ccchHHHHHHHCCCHHHHHHHHhcCccc-cccc----HHH
Confidence 777889999999 9999999999998652 2678999999999999999999876542 2222 233
Q ss_pred HHHHHcCCh---------------------------hHHHHHhcCcccccc--ccCCCCCCChHHHHHHHhCCCCc-eee
Q 037701 267 HFAMVSLRG---------------------------GVLKSLLENPYVISL--IHGRDKNGNTPLHVLAAACRDSS-YFI 316 (358)
Q Consensus 267 ~~a~~~~~~---------------------------~~~~~Ll~~~~~~~~--~~~~~~~g~tpL~~a~~~~~~~~-~~L 316 (358)
+.|+..|+. +.+++|++.+..... .......+.||||+|+..|+..+ ++|
T Consensus 259 ~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lL 338 (376)
T 2aja_A 259 KLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALL 338 (376)
T ss_dssp TTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHH
T ss_pred HHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHH
Confidence 334333333 344555554321011 11223457799999999999999 999
Q ss_pred cCCcchHHHHhhCCCchhhHhhhCCCCcccccceeee
Q 037701 317 VPDSDMYEAVNKQNTSVEHIVRYGYPELEVIPSLLII 353 (358)
Q Consensus 317 l~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~ 353 (358)
++.| .+++..|+|++++|... |..++++.-+++
T Consensus 339 l~~~---~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 371 (376)
T 2aja_A 339 LSIP---SVLALTKANNYYINETG-GRLDLRAVALEH 371 (376)
T ss_dssp TTSH---HHHHSCC-----------------------
T ss_pred HcCh---HHHHHHHHhcccccccc-ccccHHHHHHHH
Confidence 9875 78999999999999875 889988876654
No 58
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=2.9e-33 Score=226.43 Aligned_cols=200 Identities=14% Similarity=0.112 Sum_probs=167.6
Q ss_pred HHHHHhcCCCCCCCC---CCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCc
Q 037701 140 VAEILENCPSADHRG---PDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDD 216 (358)
Q Consensus 140 ~~~Ll~~~~~~~~~~---~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~ 216 (358)
++.|++.|.+++..+ ..+.||||+|+..|+.+++++|++.|++ .+.++..|.||||+|+..|+.+++++|++.|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 467888888876544 4567889999999999999999999987 677899999999999999999999999999854
Q ss_pred ccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCccccc-CCCCcHHHHH--HHcCChhHHHHHhcCccccccccC
Q 037701 217 KIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVD-NRGWNARHFA--MVSLRGGVLKSLLENPYVISLIHG 293 (358)
Q Consensus 217 ~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~l~~a--~~~~~~~~~~~Ll~~~~~~~~~~~ 293 (358)
++..+..|.||||+|+..|+.+++++|++.+++. +..+ ..|.||||+| +..++.+++++|+++| ++++.
T Consensus 80 ----~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g---a~~~~ 151 (229)
T 2vge_A 80 ----VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAI-FATTLSDGATAFEKCDPYREGYADCATYLADVE---QSMGL 151 (229)
T ss_dssp ----TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH---HHTTT
T ss_pred ----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC---CCccc
Confidence 7788999999999999999999999999998875 5554 6999999999 9999999999999999 88999
Q ss_pred CCCCCChHHHHHHHhCCCCceeecCCcch--HHHHhhCCCchhhHhhhCCCCccccccee
Q 037701 294 RDKNGNTPLHVLAAACRDSSYFIVPDSDM--YEAVNKQNTSVEHIVRYGYPELEVIPSLL 351 (358)
Q Consensus 294 ~~~~g~tpL~~a~~~~~~~~~~Ll~~g~~--~~~~~~~g~t~l~~a~~~~~~~~~~~~L~ 351 (358)
+|..|.||++.++... ..++|++.|++ ++.+|..|+|||++|+.. |+.++++.++
T Consensus 152 ~~~~~~~~l~~~~~~~--~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~-g~~~~v~~~~ 208 (229)
T 2vge_A 152 MNSGAVYALWDYSAEF--GDELSFREGESVTVLRRDGPEETDWWWAALH-GQEGYVPRNY 208 (229)
T ss_dssp SGGGEEEESSCBCCSS--TTBCCBCTTCEEEEEESSCTTCSSEEEEEET-TEEEEEEGGG
T ss_pred ccCCchHHHHHHhhcc--ccccCccccccccccccCCCcccHHHHHHHc-CCcceeehhh
Confidence 9999999998644332 22788899988 778899999999999985 9999998643
No 59
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=2.6e-31 Score=205.90 Aligned_cols=169 Identities=16% Similarity=0.189 Sum_probs=103.2
Q ss_pred CCcHHHHHHHHHhCCcHHHHHHHHhcCCC-CCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHH
Q 037701 121 KNTALHEAVQSAAKGSVEMVAEILENCPS-ADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAA 199 (358)
Q Consensus 121 ~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~-~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~ 199 (358)
+.||||.|+.. ++.++++.|++.+.+ ++..+..|.||||+|+..++.+++++|++.|++ .+..+..|.||||+|+
T Consensus 2 ~~~~L~~A~~~---g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~ 77 (172)
T 3v30_A 2 DSLSIHQLAAQ---GELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-PHILAKERESALSLAS 77 (172)
T ss_dssp --CCHHHHHHT---TCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHH
T ss_pred chhhHHHHHHc---CCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-chhhcccCCCHHHHHH
Confidence 34666666543 666666666666655 556666666666666666666666666666655 4455666666666666
Q ss_pred HcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHH
Q 037701 200 YLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLK 279 (358)
Q Consensus 200 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 279 (358)
..++.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|++.+++ ++.++..|.||||+|+..++.++++
T Consensus 78 ~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 78 TGGYTDIVGLLLERDVD----INIYDWNGGTPLLYAVRGNHVKCVEALLARGAD-LTTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp HTTCHHHHHHHHTTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HCCCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHhCcHHHHH
Confidence 66666666666666633 555566666666666666666666666666554 3556666666666666666666666
Q ss_pred HHhcCccccccccCCCCCCChH
Q 037701 280 SLLENPYVISLIHGRDKNGNTP 301 (358)
Q Consensus 280 ~Ll~~~~~~~~~~~~~~~g~tp 301 (358)
+|++++ +++..++..|.||
T Consensus 153 ~L~~~~---~~~~~~~~~~~~p 171 (172)
T 3v30_A 153 VIENHI---LKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHH---HHHSCC-------
T ss_pred HHHHHH---HHHhcccCCCCCC
Confidence 666666 5555555555554
No 60
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=2.7e-30 Score=203.89 Aligned_cols=163 Identities=23% Similarity=0.249 Sum_probs=151.0
Q ss_pred HHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCC
Q 037701 114 LLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWT 193 (358)
Q Consensus 114 ~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 193 (358)
++.+|..|.||||+|+.. ++.+++++|++.|++++..+..|.||||+|+..++.+++++|++.+++ .+.++..|.|
T Consensus 28 ~n~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 103 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACML---GMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VNTKDFSGKT 103 (192)
T ss_dssp HTCCCTTCCCHHHHHHHH---TCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCC
T ss_pred HhCcCCCCCCHHHHHHHc---CCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCc
Confidence 567899999999999877 999999999999999999999999999999999999999999999887 5778899999
Q ss_pred HHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcC
Q 037701 194 SLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSL 273 (358)
Q Consensus 194 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 273 (358)
|||+|+..++.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.+++ ++.+|..|.||+|+|+..+
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~ 178 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGAN----VNDRNLEGETPLIVASKYGRSEIVKKLLELGAD-ISARDLTGLTAEASARIFG 178 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC----SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhC
Confidence 99999999999999999999854 778899999999999999999999999999776 5889999999999999999
Q ss_pred ChhHHHHHhcCc
Q 037701 274 RGGVLKSLLENP 285 (358)
Q Consensus 274 ~~~~~~~Ll~~~ 285 (358)
+.+++++|++++
T Consensus 179 ~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 179 RQEVIKIFTEVR 190 (192)
T ss_dssp CHHHHHHHHHHH
T ss_pred cHHHHHHHHhcc
Confidence 999999999865
No 61
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=6e-31 Score=219.30 Aligned_cols=198 Identities=20% Similarity=0.225 Sum_probs=172.9
Q ss_pred ccCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHHHhcCCcHHHHHHHHHHH-hhhHhhhcchh
Q 037701 30 THEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAK-KQSRELESGVD 108 (358)
Q Consensus 30 ~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~ 108 (358)
+....+++|.|+..++ .+.++.++.... ...++..|..|.||||+|+..|+.++|++|++.|+ +
T Consensus 73 ~~~~~~~l~~a~~~~~---~~~~~~l~~~~~--~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~---------- 137 (276)
T 4hbd_A 73 RLACRSDAHPELVRRH---LVTFRAMSARLL--DYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCK---------- 137 (276)
T ss_dssp HHHHSTTCCHHHHHHH---HHHHHHHCHHHH--HHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCC----------
T ss_pred HHHhccCCCHHHHHHH---HHHHHHHHHHHH--hhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCc----------
Confidence 3456788999999999 777776655321 22478899999999999999999999999999997 5
Q ss_pred HHHHHHHhhcccCCcHHHHHHHHH--hCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCccccc
Q 037701 109 WIRWMLLVENEEKNTALHEAVQSA--AKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRE 186 (358)
Q Consensus 109 ~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~ 186 (358)
++..+..|.||||+|+... ..++.++++.|++.|.+++..+..|.||||+|+..|+.+++++|++.|++ .+.
T Consensus 138 -----~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~ 211 (276)
T 4hbd_A 138 -----VDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEAD-VNV 211 (276)
T ss_dssp -----TTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTC
T ss_pred -----CCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCC
Confidence 4468999999999996210 33789999999999999999999999999999999999999999999988 678
Q ss_pred ccCCCCCHHHHHHHcCCHHHHHHHhc-CCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCC
Q 037701 187 RDRHGWTSLHHAAYLGHSNITSMMLK-SEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCP 252 (358)
Q Consensus 187 ~~~~~~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~ 252 (358)
++..|.||||+|+..|+.+++++|++ .|. +++.++..|.||||+|+..|+.+++++|+++..
T Consensus 212 ~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ga----d~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 212 QDDDGSTALMCACEHGHKEIAGLLLAVPSC----DISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHTSTTC----CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHhcCCC----CCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 89999999999999999999999999 674 478889999999999999999999999999854
No 62
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=5.6e-30 Score=196.43 Aligned_cols=157 Identities=25% Similarity=0.346 Sum_probs=146.7
Q ss_pred cCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHH
Q 037701 120 EKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAA 199 (358)
Q Consensus 120 ~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~ 199 (358)
...|||+.|+.. ++.+++++|++.|++++..+..|.||||+|+. ++.+++++|++.|.+ .+.++..|.||||+|+
T Consensus 4 ~~~~~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~ 78 (162)
T 1ihb_A 4 PWGNELASAAAR---GDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-PDLKDRTGFAVIHDAA 78 (162)
T ss_dssp -CHHHHHHHHHH---TCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHH
T ss_pred hHhhHHHHHHHc---CCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH
Confidence 355999999877 99999999999999999999999999999999 999999999999887 5678999999999999
Q ss_pred HcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHH
Q 037701 200 YLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLK 279 (358)
Q Consensus 200 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 279 (358)
..|+.+++++|++.+.+ ++.++..|.||||+|+..|+.+++++|++.+++.++..+..|.||||+|+..++.++++
T Consensus 79 ~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 154 (162)
T 1ihb_A 79 RAGFLDTLQTLLEFQAD----VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVS 154 (162)
T ss_dssp HHTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 99999999999999854 77889999999999999999999999999999877889999999999999999999999
Q ss_pred HHhcCc
Q 037701 280 SLLENP 285 (358)
Q Consensus 280 ~Ll~~~ 285 (358)
+|+++|
T Consensus 155 ~Ll~~G 160 (162)
T 1ihb_A 155 LMQANG 160 (162)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999988
No 63
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=5.7e-30 Score=198.35 Aligned_cols=169 Identities=20% Similarity=0.188 Sum_probs=152.3
Q ss_pred CccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHH
Q 037701 157 GLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAA 236 (358)
Q Consensus 157 ~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~ 236 (358)
+.+|||.|+..|+.+++++|++.+....+.++..|.||||+|+..|+.+++++|++.|.+ ++..+..|.||||+|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~ 77 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD----PHILAKERESALSLAS 77 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC----TTCCCTTCCCHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----chhhcccCCCHHHHHH
Confidence 468999999999999999999999887888899999999999999999999999999854 7778899999999999
Q ss_pred HcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-ee
Q 037701 237 SQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YF 315 (358)
Q Consensus 237 ~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~ 315 (358)
..++.+++++|++.+.+ ++.+|..|.||||+|+..++.+++++|+++| ++++.+|..|.||||+|+..++..+ ++
T Consensus 78 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~t~l~~A~~~~~~~~~~~ 153 (172)
T 3v30_A 78 TGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARG---ADLTTEADSGYTPMDLAVALGYRKVQQV 153 (172)
T ss_dssp HTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCccccCCCCCCHHHHHHHhCcHHHHHH
Confidence 99999999999999776 5889999999999999999999999999998 8999999999999999999999999 99
Q ss_pred ecCCcchHHHHhhCCCch
Q 037701 316 IVPDSDMYEAVNKQNTSV 333 (358)
Q Consensus 316 Ll~~g~~~~~~~~~g~t~ 333 (358)
|+++|+++..++..|.||
T Consensus 154 L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 154 IENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHSCC-------
T ss_pred HHHHHHHHhcccCCCCCC
Confidence 999999999999999887
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=1.8e-29 Score=194.61 Aligned_cols=157 Identities=25% Similarity=0.253 Sum_probs=90.1
Q ss_pred CCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCC
Q 037701 72 KGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSAD 151 (358)
Q Consensus 72 ~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~ 151 (358)
.|.||||.|+..|+.+++++|++.|++ ++..+..|.||||+|+.. ++.+++++|++.|++++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~---------------~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~ 63 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV---------------INHTDEEGFTPLMWAAAH---GQIAVVEFLLQNGADPQ 63 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC---------------TTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTTCCTT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC---------------cCCCCCCCCCHHHHHHHC---CCHHHHHHHHHcCCCCC
Confidence 355666666666666666666665544 334555566666666443 56666666666666666
Q ss_pred CCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCH
Q 037701 152 HRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTA 231 (358)
Q Consensus 152 ~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~ 231 (358)
..+..|.||||+|+..++.+++++|++.+.+ .+.++..|.||||+|+..|+.+++++|++.|++ ++..+..|.||
T Consensus 64 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~ 138 (167)
T 3v31_A 64 LLGKGRESALSLACSKGYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD----PTIETDSGYNS 138 (167)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCH
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCH
Confidence 6565666666666666666666666655555 344555555555555555555555555555533 44445555555
Q ss_pred HHHHHHcCcHHHHHHHHhhC
Q 037701 232 LHLAASQGYERVVRRIIRHC 251 (358)
Q Consensus 232 l~~a~~~~~~~~v~~Ll~~~ 251 (358)
+++|+..|+.+++++|++++
T Consensus 139 l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 139 MDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHHH
Confidence 55555555555555555543
No 65
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=4.5e-29 Score=192.58 Aligned_cols=161 Identities=24% Similarity=0.321 Sum_probs=144.5
Q ss_pred hhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHH
Q 037701 116 VENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSL 195 (358)
Q Consensus 116 ~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l 195 (358)
.....+.++++.|++. ++.+++++|++.|++++..+..|.||||+|+..++.+++++|++.+.+ .+..+..|.|||
T Consensus 9 ~~~~~~~~~l~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 84 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARA---GRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-VNAVDHAGMTPL 84 (169)
T ss_dssp ----CHHHHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred cCCCcccchHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHH
Confidence 3556677999999877 999999999999999999999999999999999999999999999887 567889999999
Q ss_pred HHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCCh
Q 037701 196 HHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRG 275 (358)
Q Consensus 196 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 275 (358)
|+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|++++++ ++.+|..|.||+++|+..++.
T Consensus 85 ~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~ 159 (169)
T 2y1l_E 85 RLAALFGHLEIVEVLLKNGAD----VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD-VNAQDKFGKTAFDISIDNGNE 159 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCH
Confidence 999999999999999999854 777889999999999999999999999999876 478899999999999999999
Q ss_pred hHHHHHhcCc
Q 037701 276 GVLKSLLENP 285 (358)
Q Consensus 276 ~~~~~Ll~~~ 285 (358)
+++++|+++|
T Consensus 160 ~~~~~L~~~G 169 (169)
T 2y1l_E 160 DLAEILQKLN 169 (169)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHHHcC
Confidence 9999999875
No 66
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.97 E-value=3.3e-33 Score=240.83 Aligned_cols=266 Identities=12% Similarity=0.091 Sum_probs=177.6
Q ss_pred hhcccc-cCCchhhhhhhhhhccceeccCCCceehhhhccccccccchHHHHHHHHhhCcc---chhcccCCCCchhHHH
Q 037701 5 LYRDAA-KGEIEPFNEIAKDELVSIATHEKNTVLHVNIASQQEGERVSTEFVEGILEMCPS---LLLQVNDKGDTPLHVA 80 (358)
Q Consensus 5 L~~A~~-~g~~~~~~~ll~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~g~t~Lh~A 80 (358)
+++|+. .++.+.++++++.+ .++.||||+|+..|+ .+++++|++ .+. .....+..|.||||+|
T Consensus 69 ~~~a~~~~~~~~~~~~l~~~g------~~~~T~Lh~Aa~~G~---~e~v~~Ll~----~ga~~~~~~~~~~~~~tpL~~A 135 (376)
T 2aja_A 69 LYYAHYNRNAKQLWSDAHKKG------IKSEVICFVAAITGC---SSALDTLCL----LLTSDEIVKVIQAENYQAFRLA 135 (376)
T ss_dssp HHHHHTTTTCTTHHHHHHHHT------CCHHHHHHHHHHHCC---HHHHHHHTT----C--CCSSCC--CHHHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHcC------CCcCCHHHHHHHcCC---HHHHHHHHH----cCCcHHHHHHhccCCCCHHHHH
Confidence 444444 46677777777665 344699999999999 888888866 232 1123445678999999
Q ss_pred HhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCC--CCCCCc
Q 037701 81 AKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADH--RGPDGL 158 (358)
Q Consensus 81 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~--~~~~~~ 158 (358)
+..|+.++|++|+++|++... .+..+.+ .||||+|+.. |+.+++++|+++|++++. .+..|.
T Consensus 136 a~~G~~eiv~~Ll~~gad~~~------------~~i~~~~-~TpLh~Aa~~---G~~eiv~~Ll~~ga~~~~~~~d~~g~ 199 (376)
T 2aja_A 136 AENGHLHVLNRLCELAPTEIM------------AMIQAEN-YHAFRLAAEN---GHLHVLNRLCELAPTEATAMIQAENY 199 (376)
T ss_dssp HHTTCHHHHHHHHHSCTTTHH------------HHHSHHH-HHHHHHHHHT---TCHHHHHHHHHSCGGGHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCccc------------cccCCCC-CCHHHHHHHC---CCHHHHHHHHHcCCccchhccCCCCC
Confidence 999999999999999964221 1122222 7999999665 999999999999999876 778899
Q ss_pred cHHHHHH-hcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCccccccc---ccCCCCC----C
Q 037701 159 TTLHAAV-ICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALY---KEDDRGM----T 230 (358)
Q Consensus 159 t~l~~a~-~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~---~~~~~g~----t 230 (358)
||||+|+ ..|+.+++++|++.|+ .+.|||++|+..|+.+++++|++.+++....-. .-...|. +
T Consensus 200 TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~~l~~A~~~g~~~vv~ 271 (376)
T 2aja_A 200 YAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVT 271 (376)
T ss_dssp HHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSS
T ss_pred CHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCcccccccHHHHHHHHCCChhhhc
Confidence 9999999 9999999999998653 278999999999999999999998754211100 0011111 1
Q ss_pred H---------HHHHHH---cCcHHHHHHHHhhCCCC----cccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCC
Q 037701 231 A---------LHLAAS---QGYERVVRRIIRHCPES----YSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGR 294 (358)
Q Consensus 231 ~---------l~~a~~---~~~~~~v~~Ll~~~~~~----~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 294 (358)
+ +..... .+..+.+++|++..... .......+.||||+|+..|+.+++++|++.+ ..+
T Consensus 272 ~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~------~v~ 345 (376)
T 2aja_A 272 KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP------SVL 345 (376)
T ss_dssp HHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH------HHH
T ss_pred HHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh------HHH
Confidence 1 111111 22355667776543210 1223345778999999999999999999987 236
Q ss_pred CCCCChHHHHHHHhCCCCc
Q 037701 295 DKNGNTPLHVLAAACRDSS 313 (358)
Q Consensus 295 ~~~g~tpL~~a~~~~~~~~ 313 (358)
+..|.||+.+|.+.|..++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~ 364 (376)
T 2aja_A 346 ALTKANNYYINETGGRLDL 364 (376)
T ss_dssp HSCC---------------
T ss_pred HHHHHhccccccccccccH
Confidence 7899999999999988777
No 67
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=4.1e-30 Score=197.17 Aligned_cols=156 Identities=23% Similarity=0.251 Sum_probs=78.5
Q ss_pred CchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCC
Q 037701 74 DTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHR 153 (358)
Q Consensus 74 ~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~ 153 (358)
.||||.|+..|+.+++++|++.|++ ++..+..|.||||+| +. ++.+++++|++.|++++.+
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~---------------~~~~~~~g~t~L~~A---~~-~~~~~v~~Ll~~g~~~~~~ 66 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVN---------------VNAQNGFGRTALQVM---KL-GNPEIARRLLLRGANPDLK 66 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCC---------------TTCCCTTSCCHHHHC---CS-SCHHHHHHHHHTTCCTTCC
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCC---------------ccccCccCccHHHHH---Hc-CcHHHHHHHHHcCCCCCCC
Confidence 3455555555555555555554443 223444555555554 22 4555555555555555555
Q ss_pred CCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHH
Q 037701 154 GPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALH 233 (358)
Q Consensus 154 ~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~ 233 (358)
+..|.||||+|+..++.+++++|++.|.+ .+.++..|.||||+|+..|+.+++++|++.+++ .++..+..|.||||
T Consensus 67 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~~g~t~l~ 142 (162)
T 1ihb_A 67 DRTGFAVIHDAARAGFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS---NVGHRNHKGDTACD 142 (162)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC---CTTCCCTTSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC---CCCCcCCCCCcHHH
Confidence 55555555555555555555555555444 334445555555555555555555555555432 12344455555555
Q ss_pred HHHHcCcHHHHHHHHhhCC
Q 037701 234 LAASQGYERVVRRIIRHCP 252 (358)
Q Consensus 234 ~a~~~~~~~~v~~Ll~~~~ 252 (358)
+|+..|+.+++++|+++|+
T Consensus 143 ~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 143 LARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp HHHHTTCHHHHHHHHHTC-
T ss_pred HHHHcCCHHHHHHHHHhCC
Confidence 5555555555555555543
No 68
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.9e-32 Score=221.62 Aligned_cols=200 Identities=16% Similarity=0.222 Sum_probs=164.8
Q ss_pred HHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcC
Q 037701 89 VEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICN 168 (358)
Q Consensus 89 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 168 (358)
++.|+++|+++.. ....+..+.||||.|+.. ++.+++++|++.|++++..+..|.||||+|+..+
T Consensus 1 v~~ll~~~~~~~~------------~~~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g 65 (229)
T 2vge_A 1 MRSVLRKAGSPRK------------ARRARLNPLVLLLDAALT---GELEVVQQAVKEMNDPSQPNEEGITALHNAICGA 65 (229)
T ss_dssp ---------CCCC------------CCCTTSCHHHHHHHHHHH---TCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTT
T ss_pred CeehhccCCCCcc------------ccccccchhHHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC
Confidence 4567777776543 123566788999999877 9999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccC-CCCCCHHHHH--HHcCcHHHHH
Q 037701 169 AEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKED-DRGMTALHLA--ASQGYERVVR 245 (358)
Q Consensus 169 ~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~-~~g~t~l~~a--~~~~~~~~v~ 245 (358)
+.+++++|++.|++ .+.++..|.||||+|+..|+.+++++|++.|++ ++..+ ..|.||||+| +..|+.++++
T Consensus 66 ~~~~v~~Ll~~ga~-~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~----~~~~~~~~g~tpL~~A~a~~~~~~~~v~ 140 (229)
T 2vge_A 66 NYSIVDFLITAGAN-VNSPDSHGWTPLHCAASCNDTVICMALVQHGAA----IFATTLSDGATAFEKCDPYREGYADCAT 140 (229)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC----TTCCCSSTTCCTGGGCCTTSTTHHHHHH
T ss_pred CHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----cccccCCCCCCHHHHHHHHhcChHHHHH
Confidence 99999999999888 678899999999999999999999999999865 66665 6999999999 9999999999
Q ss_pred HHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc
Q 037701 246 RIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS 313 (358)
Q Consensus 246 ~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~ 313 (358)
+|++.+++ ++..+..|.||++.++..... +.|++.|.. .+++.+|..|+||||+|+..|+..+
T Consensus 141 ~Ll~~ga~-~~~~~~~~~~~l~~~~~~~~~---~~ll~~ga~-~~~~~~d~~G~TpL~~A~~~g~~~~ 203 (229)
T 2vge_A 141 YLADVEQS-MGLMNSGAVYALWDYSAEFGD---ELSFREGES-VTVLRRDGPEETDWWWAALHGQEGY 203 (229)
T ss_dssp HHHHHHHH-TTTSGGGEEEESSCBCCSSTT---BCCBCTTCE-EEEEESSCTTCSSEEEEEETTEEEE
T ss_pred HHHHcCCC-cccccCCchHHHHHHhhcccc---ccCcccccc-ccccccCCCcccHHHHHHHcCCcce
Confidence 99999876 478889999999876554433 566777721 2378899999999999999998877
No 69
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=2.2e-29 Score=194.35 Aligned_cols=160 Identities=25% Similarity=0.349 Sum_probs=145.8
Q ss_pred ccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCC
Q 037701 69 VNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCP 148 (358)
Q Consensus 69 ~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~ 148 (358)
....+.+||+.|+..|+.++|++|+++|++ ++..+..|.||||+|+.. ++.+++++|++.|+
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~ 71 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGAD---------------VNAEDASGWTPLHLAAFN---GHLEIVEVLLKNGA 71 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCC---------------TTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTTC
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCC---------------CCCCCCCCCCHHHHHHHc---CCHHHHHHHHHcCC
Confidence 345567999999999999999999999987 446888999999999775 99999999999999
Q ss_pred CCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCC
Q 037701 149 SADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRG 228 (358)
Q Consensus 149 ~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g 228 (358)
+++..+..|.||||+|+..++.+++++|++.+++ .+.++..|.||||+|+..++.+++++|++.|++ ++.++..|
T Consensus 72 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g 146 (169)
T 2y1l_E 72 DVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD----VNAQDKFG 146 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTS
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCC
Confidence 9999999999999999999999999999999988 567899999999999999999999999999855 77789999
Q ss_pred CCHHHHHHHcCcHHHHHHHHhhC
Q 037701 229 MTALHLAASQGYERVVRRIIRHC 251 (358)
Q Consensus 229 ~t~l~~a~~~~~~~~v~~Ll~~~ 251 (358)
.||+++|+..++.+++++|++.|
T Consensus 147 ~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 147 KTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999864
No 70
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=4.9e-29 Score=192.10 Aligned_cols=158 Identities=19% Similarity=0.226 Sum_probs=137.3
Q ss_pred cCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHH
Q 037701 120 EKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAA 199 (358)
Q Consensus 120 ~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~ 199 (358)
.|.||||.|+.. ++.+++++|++.+.+++..+..|.||||+|+..++.+++++|++.+.+ .+..+..|.||||+|+
T Consensus 2 ~~~t~L~~A~~~---g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~ 77 (167)
T 3v31_A 2 ANSLSVHQLAAQ---GEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRESALSLAC 77 (167)
T ss_dssp TTCCCHHHHHHT---TCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHH
T ss_pred CCcchHHHHHHC---CCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHH
Confidence 467999999665 899999999999998998899999999999999999999999988877 5677888999999999
Q ss_pred HcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHH
Q 037701 200 YLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLK 279 (358)
Q Consensus 200 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 279 (358)
..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.+++ ++.++..|.||+|+|+..++.++++
T Consensus 78 ~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (167)
T 3v31_A 78 SKGYTDIVKMLLDCGVD----VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD-PTIETDSGYNSMDLAVALGYRSVQQ 152 (167)
T ss_dssp HHTCHHHHHHHHHHTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HcCCHHHHHHHHHCCCC----CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 99999999999988854 677788899999999999999999999998766 4778888999999999999999999
Q ss_pred HHhcCcc
Q 037701 280 SLLENPY 286 (358)
Q Consensus 280 ~Ll~~~~ 286 (358)
+|++++.
T Consensus 153 ~L~~~~~ 159 (167)
T 3v31_A 153 VIESHLL 159 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988773
No 71
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=5.7e-30 Score=199.63 Aligned_cols=167 Identities=20% Similarity=0.213 Sum_probs=131.4
Q ss_pred ccCCcHHHHHHHHHhCCcHHHHHHHHhc-CCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHH
Q 037701 119 EEKNTALHEAVQSAAKGSVEMVAEILEN-CPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHH 197 (358)
Q Consensus 119 ~~~~t~l~~a~~~~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~ 197 (358)
+.+.++|+.|+.. ++.++++.|++. +.+++..+..|.||||+|+..++.+++++|++.|.+ .+.++..|.||||+
T Consensus 3 ~~~~~~l~~A~~~---g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 78 (179)
T 3f6q_A 3 PEFMDDIFTQCRE---GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-INVMNRGDDTPLHL 78 (179)
T ss_dssp ----CCHHHHHHH---TCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHH
T ss_pred HHHHHHHHHHHHc---CCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCCHHHH
Confidence 4567888888776 888888888887 566788888888888888888888888888888777 56677888888888
Q ss_pred HHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhH
Q 037701 198 AAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGV 277 (358)
Q Consensus 198 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 277 (358)
|+..|+.+++++|++.|.+ ++..+..|.||||+|+..++.+++++|++.+++ ++.+|..|.||+++|+..++.++
T Consensus 79 A~~~~~~~~v~~Ll~~g~~----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~ 153 (179)
T 3f6q_A 79 AASHGHRDIVQKLLQYKAD----INAVNEHGNVPLHYACFWGQDQVAEDLVANGAL-VSICNKYGEMPVDKAKAPLRELL 153 (179)
T ss_dssp HHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SSBCCTTSCCGGGGSCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCC----CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cchhccCCCCcHHHHHHHHHHHH
Confidence 8888888888888888744 667788888888888888888888888888766 47788888888888888888888
Q ss_pred HHHHhcCccccccccCCCCC
Q 037701 278 LKSLLENPYVISLIHGRDKN 297 (358)
Q Consensus 278 ~~~Ll~~~~~~~~~~~~~~~ 297 (358)
+++|+++| ++++..+..
T Consensus 154 ~~~L~~~g---~~~~~~~~~ 170 (179)
T 3f6q_A 154 RERAEKMG---QNLNRIPYK 170 (179)
T ss_dssp HHHHHHTT---CCCSCBCCC
T ss_pred HHHHHHhh---cCcccCCcc
Confidence 88888888 566555443
No 72
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=1.7e-28 Score=186.14 Aligned_cols=149 Identities=25% Similarity=0.245 Sum_probs=69.6
Q ss_pred cHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcC
Q 037701 123 TALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLG 202 (358)
Q Consensus 123 t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~ 202 (358)
++|+.|+.. ++.+++++|++.|.+++ .+..|.||||+|+..++.+++++|++.+.+ .+.++..|.||||+|+..|
T Consensus 4 ~~L~~A~~~---g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 4 KKLLEAARA---GQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHH---TCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHT
T ss_pred HHHHHHHHc---CCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcC
Confidence 444444333 44444444444444433 233444444444444444444444444443 2334444444444444444
Q ss_pred CHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHH
Q 037701 203 HSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSL 281 (358)
Q Consensus 203 ~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 281 (358)
+.+++++|++.|.+ ++.++..|.||||+|+..|+.+++++|++.+++ ++.++..|.||+|+|+..|+.+++++|
T Consensus 79 ~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 79 HANIVEVLLKHGAD----VNAKDMLKMTALHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CHHHHHHHHTTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred hHHHHHHHHHcCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 44444444444422 334444455555555555555555555554433 244445555555555555555554443
No 73
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.4e-30 Score=212.62 Aligned_cols=207 Identities=14% Similarity=0.102 Sum_probs=147.8
Q ss_pred ccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 037701 119 EEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHA 198 (358)
Q Consensus 119 ~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a 198 (358)
..|+||||.|++. +..+.++.|+++|++++. +..+.||||.|+..|+.+++++|++.+++ .+.++..|.||||+|
T Consensus 3 ~~g~t~L~~a~~~---~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 3 ITGQVSLPPGKRT---NLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITALHNA 77 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCHHHHH
T ss_pred ccccccCchhhhh---hhHHHHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHH
Confidence 4688999999776 999999999999999986 46789999999999999999999999986 678899999999999
Q ss_pred HHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCC-cHHHHH--HHcCCh
Q 037701 199 AYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGW-NARHFA--MVSLRG 275 (358)
Q Consensus 199 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~-t~l~~a--~~~~~~ 275 (358)
+..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|++++++. +..+..|. ||+|+| +..|+.
T Consensus 78 ~~~g~~~~v~~Ll~~ga~----~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~t~l~~a~~~~~g~~ 152 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQFGVN----VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV-FAMTYSDMQTAADKCEEMEEGYT 152 (239)
T ss_dssp HHHTCHHHHHHHHHHTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHCCSSSTTCC
T ss_pred HHcCCHHHHHHHHHcCCC----CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ceecCCCCcchHHHHHHhhhccH
Confidence 999999999999999854 7888999999999999999999999999998775 67777666 999999 788999
Q ss_pred hHHHHHhcCccccccccCC---------CCCCChHHHHHHHhCCCCceeecCCcch------HHHHhhCCCchhhHhhh
Q 037701 276 GVLKSLLENPYVISLIHGR---------DKNGNTPLHVLAAACRDSSYFIVPDSDM------YEAVNKQNTSVEHIVRY 339 (358)
Q Consensus 276 ~~~~~Ll~~~~~~~~~~~~---------~~~g~tpL~~a~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~l~~a~~ 339 (358)
+++++|++.+ ++++.. +..|.+|++++.+.|. .+..|.+.+.+ ....++.|.+|..|...
T Consensus 153 ~~~~~Ll~~~---a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~-~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~~ 227 (239)
T 1ycs_B 153 QCSQFLYGVQ---EKMGIMNKGVIYALWDYEPQNDDELPMKEGD-CMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGL 227 (239)
T ss_dssp CHHHHHHHHH---HHTTTTGGGEEEESSCBCCSSTTBCCBCSSC-EEEECCCCTTSCSSEEEEEETTEEEEEEGGGEEC
T ss_pred HHHHHHHHhh---hcccccccceEEEEeccCCCCCCcccccCCC-EEEEEEecCCCCCCEEEEEECCcEEEeehHHeeE
Confidence 9999999988 555444 6778999998877665 23666655543 23567789999998865
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=6.6e-28 Score=182.88 Aligned_cols=150 Identities=22% Similarity=0.265 Sum_probs=137.8
Q ss_pred CccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHH
Q 037701 157 GLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAA 236 (358)
Q Consensus 157 ~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~ 236 (358)
..+||+.|++.|+.+++++|++.+.... .+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~ 75 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS----RDARTKVDRTPLHMAA 75 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC----TTCCCTTCCCHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHH
Confidence 4689999999999999999999998743 588999999999999999999999999854 7778999999999999
Q ss_pred HcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-ee
Q 037701 237 SQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YF 315 (358)
Q Consensus 237 ~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~ 315 (358)
..|+.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++| ++++.+|..|.||||+|+..++.++ ++
T Consensus 76 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~t~l~~A~~~~~~~i~~~ 151 (153)
T 1awc_B 76 SEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYG---ADVHTQSKFCKTAFDISIDNGNEDLAEI 151 (153)
T ss_dssp HHTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcChHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999999999776 5889999999999999999999999999998 8999999999999999999998776 44
Q ss_pred e
Q 037701 316 I 316 (358)
Q Consensus 316 L 316 (358)
|
T Consensus 152 L 152 (153)
T 1awc_B 152 L 152 (153)
T ss_dssp H
T ss_pred h
Confidence 3
No 75
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=2.5e-29 Score=193.34 Aligned_cols=159 Identities=22% Similarity=0.279 Sum_probs=112.1
Q ss_pred hcccCCcHHHHHHHHHhCCcHHHHHHHHh-cCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHH
Q 037701 117 ENEEKNTALHEAVQSAAKGSVEMVAEILE-NCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSL 195 (358)
Q Consensus 117 ~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~-~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l 195 (358)
.+..+.|||+.|+.. ++.++++.|++ .+.+++..+..|.||||+|+..++.+++++|++.+.+ .+.++..|.|||
T Consensus 4 ~~~~~~~~l~~A~~~---g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 79 (165)
T 3twr_A 4 GNSEADRQLLEAAKA---GDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKGGLVPL 79 (165)
T ss_dssp --CHHHHHHHHHHHH---TCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred CcchhhHHHHHHHHh---CCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCCCCCHH
Confidence 566677777777665 77777777776 3345566666677777777777777777777777766 456677777777
Q ss_pred HHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCCh
Q 037701 196 HHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRG 275 (358)
Q Consensus 196 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 275 (358)
|+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||+|+|+. ++.
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~a~~-~~~ 153 (165)
T 3twr_A 80 HNACSYGHYEVAELLVKHGAV----VNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD-PTKKNRDGNTPLDLVKD-GDT 153 (165)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCTGGGSCT-TCH
T ss_pred HHHHHcCcHHHHHHHHhCCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCChhHhHhc-CCh
Confidence 777777777777777777643 556677777777777777777777777777655 36677777777777655 677
Q ss_pred hHHHHHhcCc
Q 037701 276 GVLKSLLENP 285 (358)
Q Consensus 276 ~~~~~Ll~~~ 285 (358)
+++++|++.|
T Consensus 154 ~i~~~L~~~g 163 (165)
T 3twr_A 154 DIQDLLRGDA 163 (165)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHhhcc
Confidence 7777777765
No 76
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=3.7e-28 Score=189.35 Aligned_cols=168 Identities=20% Similarity=0.281 Sum_probs=153.1
Q ss_pred CCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHH
Q 037701 155 PDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHL 234 (358)
Q Consensus 155 ~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~ 234 (358)
.++.++|+.|+..|+.+++++|++.++...+..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~ 78 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR----INVMNRGDDTPLHL 78 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTCCCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC----CCCcCCCCCCHHHH
Confidence 45789999999999999999999997777888999999999999999999999999999854 77789999999999
Q ss_pred HHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-
Q 037701 235 AASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS- 313 (358)
Q Consensus 235 a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~- 313 (358)
|+..|+.+++++|++.+.+ ++..|..|.||||+|+..++.+++++|+++| ++++.+|..|.|||++|+..++..+
T Consensus 79 A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~tpl~~A~~~~~~~~~ 154 (179)
T 3f6q_A 79 AASHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANG---ALVSICNKYGEMPVDKAKAPLRELLR 154 (179)
T ss_dssp HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCSSBCCTTSCCGGGGSCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCcchhccCCCCcHHHHHHHHHHHHH
Confidence 9999999999999999876 5889999999999999999999999999999 8999999999999999999998888
Q ss_pred eeecCCcchHHHHhhCC
Q 037701 314 YFIVPDSDMYEAVNKQN 330 (358)
Q Consensus 314 ~~Ll~~g~~~~~~~~~g 330 (358)
++|++.|++++..+..+
T Consensus 155 ~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 155 ERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp HHHHHTTCCCSCBCCCC
T ss_pred HHHHHhhcCcccCCccc
Confidence 99999999988766554
No 77
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=1.5e-27 Score=181.65 Aligned_cols=153 Identities=21% Similarity=0.273 Sum_probs=138.8
Q ss_pred CCcHHHHHHHHHhCCcHHHHHHHHhc-CCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHH
Q 037701 121 KNTALHEAVQSAAKGSVEMVAEILEN-CPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAA 199 (358)
Q Consensus 121 ~~t~l~~a~~~~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~ 199 (358)
+.|||+.|+.. ++.++++.|++. +.+++..+..|.||||+ +..++.+++++|++.|.+ .+.++..|.||||+|+
T Consensus 2 ~~~~L~~A~~~---g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~ 76 (156)
T 1bd8_A 2 AGDRLSGAAAR---GDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTSPVHDAA 76 (156)
T ss_dssp HHHHHHHHHHH---TCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHH
T ss_pred cchHHHHHHHh---CCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHH
Confidence 45899999877 999999999988 34889999999999999 999999999999999887 5778899999999999
Q ss_pred HcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHH
Q 037701 200 YLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLK 279 (358)
Q Consensus 200 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 279 (358)
..|+.+++++|++.|.+ ++..+..|.||||+|+..|+.+++++|++. . +++.+|..|.||||+|+..++.++++
T Consensus 77 ~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~-~~~~~~~~g~t~l~~A~~~~~~~~v~ 150 (156)
T 1bd8_A 77 RTGFLDTLKVLVEHGAD----VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-S-DLHRRDARGLTPLELALQRGAQDLVD 150 (156)
T ss_dssp HTTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-S-CTTCCCTTSCCHHHHHHHSCCHHHHH
T ss_pred HcCcHHHHHHHHHcCCC----CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-c-CCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 99999999999999854 777889999999999999999999999998 4 45889999999999999999999999
Q ss_pred HHhcC
Q 037701 280 SLLEN 284 (358)
Q Consensus 280 ~Ll~~ 284 (358)
+|+++
T Consensus 151 ~Ll~~ 155 (156)
T 1bd8_A 151 ILQGH 155 (156)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 99975
No 78
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=4.4e-28 Score=184.56 Aligned_cols=153 Identities=26% Similarity=0.304 Sum_probs=139.8
Q ss_pred CCchhHHHHhcCCcHHHHHHHHHH-HhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCC
Q 037701 73 GDTPLHVAAKCRHPAVVEVLIKFA-KKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSAD 151 (358)
Q Consensus 73 g~t~Lh~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~ 151 (358)
+.||||.|+..|+.+++++|++.. .+ ++..+..|.||||+ +.. ++.+++++|++.|++++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~---------------~~~~~~~g~t~L~~-~~~---~~~~~v~~Ll~~g~~~~ 62 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVH---------------PDALNRFGKTALQV-MMF---GSTAIALELLKQGASPN 62 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCC---------------TTCCCTTSCCHHHH-SCT---TCHHHHHHHHHTTCCTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcC---------------ccccCCCCCcHHHH-HHc---CCHHHHHHHHHCCCCCC
Confidence 468999999999999999999982 13 44678899999999 665 99999999999999999
Q ss_pred CCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCH
Q 037701 152 HRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTA 231 (358)
Q Consensus 152 ~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~ 231 (358)
.++..|.||||+|+..++.+++++|++.|++ .+.++..|.||||+|+..|+.+++++|++. .+ ++..+..|.||
T Consensus 63 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~----~~~~~~~g~t~ 136 (156)
T 1bd8_A 63 VQDTSGTSPVHDAARTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD----LHRRDARGLTP 136 (156)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC----TTCCCTTSCCH
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC----CCCcCCCCCCH
Confidence 9999999999999999999999999999987 677899999999999999999999999987 44 77789999999
Q ss_pred HHHHHHcCcHHHHHHHHhh
Q 037701 232 LHLAASQGYERVVRRIIRH 250 (358)
Q Consensus 232 l~~a~~~~~~~~v~~Ll~~ 250 (358)
||+|+..|+.+++++|+++
T Consensus 137 l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 137 LELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999975
No 79
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=6.8e-28 Score=185.29 Aligned_cols=160 Identities=21% Similarity=0.263 Sum_probs=144.2
Q ss_pred CCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHH
Q 037701 153 RGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTAL 232 (358)
Q Consensus 153 ~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l 232 (358)
.+..+.+||+.|++.|+.+++++|++.+.......+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.|||
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L 79 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD----VHAKDKGGLVPL 79 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC----CCccCCCCCCHH
Confidence 3567899999999999999999999977766777888999999999999999999999999854 778899999999
Q ss_pred HHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCC
Q 037701 233 HLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDS 312 (358)
Q Consensus 233 ~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~ 312 (358)
|+|+..++.+++++|++.+.+ ++.+|..|.||||+|+..++.+++++|+++| ++++.+|..|.||||+|.+ ++.+
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~t~l~~a~~-~~~~ 154 (165)
T 3twr_A 80 HNACSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQHG---ADPTKKNRDGNTPLDLVKD-GDTD 154 (165)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCTGGGSCT-TCHH
T ss_pred HHHHHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCcccCCCCCChhHhHhc-CChH
Confidence 999999999999999999876 4889999999999999999999999999998 8999999999999999877 6667
Q ss_pred c-eeecCCcc
Q 037701 313 S-YFIVPDSD 321 (358)
Q Consensus 313 ~-~~Ll~~g~ 321 (358)
+ ++|++.|+
T Consensus 155 i~~~L~~~gA 164 (165)
T 3twr_A 155 IQDLLRGDAA 164 (165)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHhhccc
Confidence 7 99998886
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=1e-28 Score=201.51 Aligned_cols=175 Identities=17% Similarity=0.166 Sum_probs=127.9
Q ss_pred CCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHH
Q 037701 155 PDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHL 234 (358)
Q Consensus 155 ~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~ 234 (358)
..|.||||.|+..+..+.++.|+++|.+.. .+..+.||||.|+..|+.+++++|++.+++ ++..+..|.||||+
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~--~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~----~~~~d~~g~t~L~~ 76 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVK--FNPLPLALLLDSSLEGEFDLVQRIIYEVDD----PSLPNDEGITALHN 76 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS----CCCCCTTSCCHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcc--cCchhhHHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHH
Confidence 458999999999999999999999998853 247789999999999999999999999854 77889999999999
Q ss_pred HHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCC-hHHHHH--HHhCCC
Q 037701 235 AASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGN-TPLHVL--AAACRD 311 (358)
Q Consensus 235 a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~-tpL~~a--~~~~~~ 311 (358)
|+..|+.+++++|++.+++ ++.+|..|+||||+|+..++.+++++|+++| ++++.++..|. ||||+| +..++.
T Consensus 77 A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~~~~t~l~~a~~~~~g~~ 152 (239)
T 1ycs_B 77 AVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESG---AAVFAMTYSDMQTAADKCEEMEEGYT 152 (239)
T ss_dssp HHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCSSSCCCHHHHCCSSSTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCcceecCCCCcchHHHHHHhhhccH
Confidence 9999999999999999876 5889999999999999999999999999999 89999998887 999999 677888
Q ss_pred Cc-eeecCCcchHHHHhh---------CCCchhhHhhh
Q 037701 312 SS-YFIVPDSDMYEAVNK---------QNTSVEHIVRY 339 (358)
Q Consensus 312 ~~-~~Ll~~g~~~~~~~~---------~g~t~l~~a~~ 339 (358)
.+ ++|++.|++++..+. .+.++.+++..
T Consensus 153 ~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~ 190 (239)
T 1ycs_B 153 QCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMK 190 (239)
T ss_dssp CHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBC
T ss_pred HHHHHHHHhhhcccccccceEEEEeccCCCCCCccccc
Confidence 88 999999999988754 47777777754
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=5.9e-27 Score=178.14 Aligned_cols=139 Identities=15% Similarity=0.107 Sum_probs=68.4
Q ss_pred cCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCc-HH
Q 037701 188 DRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWN-AR 266 (358)
Q Consensus 188 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t-~l 266 (358)
+..|.||||+|+..|+.+++++|++.|.+ ++..+..|.||||+|+ .|+.+++++|++.+.+ ++.++..|.| ||
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~g~ttpL 82 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGAN----PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRPV 82 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCC----TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCCCCcHHH
Confidence 44455555555555555555555555432 4445555555555553 5555555555555443 3455555555 55
Q ss_pred HHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeecCCcchHHHHhhCCCchhh
Q 037701 267 HFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVPDSDMYEAVNKQNTSVEH 335 (358)
Q Consensus 267 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~~~~~~~~g~t~l~ 335 (358)
|+|+..++.+++++|+++| ++++.+|..|.||||+|+..++..+ ++|++.|++++.++..|.||.+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~g---a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAG---ARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHT---CCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred HHHHHCCCHHHHHHHHHcC---CCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 5555555555555555555 5555555555555555555555555 5555555555555555555544
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=2.6e-27 Score=184.68 Aligned_cols=158 Identities=11% Similarity=0.079 Sum_probs=124.4
Q ss_pred hhhhcccccCCchhhhhhhhhhccceec-cCCCceehhhhcccccc-ccchHHHHHHHHhhCccchhcccCCCCchhHHH
Q 037701 3 PDLYRDAAKGEIEPFNEIAKDELVSIAT-HEKNTVLHVNIASQQEG-ERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVA 80 (358)
Q Consensus 3 ~~L~~A~~~g~~~~~~~ll~~~~~~~~~-~~~~t~l~~a~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A 80 (358)
++|+.||+.|+.+.++.+++.+ .+..+ ..|.||||+|+..|+.. ..+++++|++ .+++++.+|..|.||||+|
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~-~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~----~Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKG-YEDKESVLKSNILYDVLRNNNDEARYKISMFLIN----KGADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHS-SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHH----TTCCSSCCCTTCCCTHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcC-cccccccCCCCHHHHHHHcCCcchHHHHHHHHHH----CCCCCCCCCCCCCcHHHHH
Confidence 5789999999999999999887 55555 78999999999998610 0236777766 6889999999999999999
Q ss_pred HhcCC------cHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCC-cHHHHHHHHHh--CCcHHHHHHHHh-cCCCC
Q 037701 81 AKCRH------PAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKN-TALHEAVQSAA--KGSVEMVAEILE-NCPSA 150 (358)
Q Consensus 81 ~~~~~------~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-t~l~~a~~~~~--~~~~~~~~~Ll~-~~~~~ 150 (358)
+..++ .+++++|+++|++ ++.+|..|. ||||+|+.... .+..+++++|++ .|+++
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gad---------------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~ 147 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGAD---------------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL 147 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCC---------------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT
T ss_pred HHcCCcchhhHHHHHHHHHHCCCC---------------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC
Confidence 99887 4678888888887 556788888 88888864100 134568888888 88888
Q ss_pred CCCCCCCccHHHHHHhcCcHHHHHHHHHhC
Q 037701 151 DHRGPDGLTTLHAAVICNAEDVIKLLLEKK 180 (358)
Q Consensus 151 ~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~ 180 (358)
+.+|..|.||||+|++.++.+++++|.+..
T Consensus 148 ~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 148 LIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp TCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 888888888888888888888888887654
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=2e-26 Score=170.92 Aligned_cols=126 Identities=21% Similarity=0.222 Sum_probs=59.8
Q ss_pred hcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCC-CCCHH
Q 037701 117 ENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRH-GWTSL 195 (358)
Q Consensus 117 ~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~-~~t~l 195 (358)
.+..|.||||+|+.. ++.+++++|++.|++++.++..|.||||+|+. ++.+++++|++.+++ .+.++.. |.|||
T Consensus 8 ~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~~g~t~L 82 (136)
T 1d9s_A 8 LGGSSDAGLATAAAR---GQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPATLTRPV 82 (136)
T ss_dssp CCCCCSCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTTTTBCHH
T ss_pred CCCCCccHHHHHHHc---CCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCCCCCCHH
Confidence 344444444444332 44444444444444444444444455554444 444555555444444 2334444 45555
Q ss_pred HHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhC
Q 037701 196 HHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHC 251 (358)
Q Consensus 196 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~ 251 (358)
|+|+..|+.+++++|++.+++ ++.++..|.||||+|+..++.+++++|+++|
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGAR----LDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCC----CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC----CCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 555555555555555544422 3444444555555555555555555555443
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=5.5e-26 Score=172.76 Aligned_cols=143 Identities=15% Similarity=0.125 Sum_probs=89.2
Q ss_pred CCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCC-H
Q 037701 153 RGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMT-A 231 (358)
Q Consensus 153 ~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t-~ 231 (358)
.+..|.||||+|+..|+.+++++|++.|.+ .+.++..|.||||+|+ .|+.+++++|++.|.+ ++.++..|.| |
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~----~~~~d~~g~ttp 81 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE----PNCADPATLTRP 81 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC----CCCCCTTTCCCH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC----CCCcCCCCCcHH
Confidence 345566777777777777777777766655 4556667777777764 6677777777776633 5666777777 7
Q ss_pred HHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHH
Q 037701 232 LHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVL 305 (358)
Q Consensus 232 l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a 305 (358)
||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++| ++++.++..|.||.+-+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAA---GGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------------------
T ss_pred HHHHHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcC---CCCCccCcCcCcccccC
Confidence 7777777777777777777655 4677777888888888888888888888877 77777777777776643
No 85
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=1.1e-25 Score=166.92 Aligned_cols=132 Identities=16% Similarity=0.181 Sum_probs=108.8
Q ss_pred CCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCC
Q 037701 147 CPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDD 226 (358)
Q Consensus 147 ~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 226 (358)
+++++..+..|.||||+|+..++.+++++|++.+.+ .+.++..|.||||+|+. ++.+++++|++.+.+ ++.++.
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~----~~~~~~ 75 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE----PNCADP 75 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC----SSCCBT
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC----CCCcCC
Confidence 357778888888888888888888888888888776 56678888888888888 888888888888744 667777
Q ss_pred C-CCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCc
Q 037701 227 R-GMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENP 285 (358)
Q Consensus 227 ~-g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 285 (358)
. |.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|
T Consensus 76 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 76 ATLTRPVHDAAREGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp TTTBCHHHHHHHHTCHHHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 7 88888888888888888888888766 4778888888888888888888888888876
No 86
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=7.4e-26 Score=176.39 Aligned_cols=153 Identities=12% Similarity=0.065 Sum_probs=102.0
Q ss_pred CCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhc-ccCCcHHHHHHHHHhCCcH----HHHHHHHhcC
Q 037701 73 GDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVEN-EEKNTALHEAVQSAAKGSV----EMVAEILENC 147 (358)
Q Consensus 73 g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~----~~~~~Ll~~~ 147 (358)
++++|+.|+..|+.+.++.+++.+.+ ..+ ..|.||||+|+.. ++. +++++|++.|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~-----------------~~~~~~g~T~Lh~A~~~---~~~~~~~~iv~~Ll~~G 65 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE-----------------DKESVLKSNILYDVLRN---NNDEARYKISMFLINKG 65 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS-----------------CHHHHHTTTHHHHHTTC---SCHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc-----------------cccccCCCCHHHHHHHc---CCcchHHHHHHHHHHCC
Confidence 46788888888888888888876543 223 6688888888643 543 5888888888
Q ss_pred CCCCCCCCCCccHHHHHHhcCc------HHHHHHHHHhCCcccccccCCCC-CHHHHHHHcCC-----HHHHHHHhc-CC
Q 037701 148 PSADHRGPDGLTTLHAAVICNA------EDVIKLLLEKKKILTRERDRHGW-TSLHHAAYLGH-----SNITSMMLK-SE 214 (358)
Q Consensus 148 ~~~~~~~~~~~t~l~~a~~~~~------~~~v~~Ll~~~~~~~~~~~~~~~-t~l~~a~~~~~-----~~~~~~Ll~-~~ 214 (358)
+++|.++..|.||||+|+..++ .+++++|+++|++ ++.+|..|. ||||+|+..+. .+++++|++ .|
T Consensus 66 advn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g 144 (186)
T 3t8k_A 66 ADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG 144 (186)
T ss_dssp CCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT
T ss_pred CCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC
Confidence 8888888888888888887765 4566666666666 455666666 66666665332 235555555 45
Q ss_pred CcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhh
Q 037701 215 DDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRH 250 (358)
Q Consensus 215 ~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~ 250 (358)
++ ++.+|..|.||||+|++.|+.+++++|.+.
T Consensus 145 ad----~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 145 LQ----LLIKDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp CC----TTCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred CC----CcccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 32 455555555555555555555555555543
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=2.1e-24 Score=157.86 Aligned_cols=123 Identities=33% Similarity=0.505 Sum_probs=69.2
Q ss_pred CCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCC
Q 037701 73 GDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADH 152 (358)
Q Consensus 73 g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~ 152 (358)
|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+.. ++.+++++|++.|++++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~---------------~~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~ 63 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD---------------VNAKDKNGRTPLHLAARN---GHLEVVKLLLEAGADVNA 63 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCC---------------TTCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCTTC
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCC---------------CCCcCCCCCcHHHHHHHc---CcHHHHHHHHHcCCCCcc
Confidence 55666666666666666666655544 223455555666665544 555556666555555555
Q ss_pred CCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCC
Q 037701 153 RGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSE 214 (358)
Q Consensus 153 ~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 214 (358)
.+..|.||||+|+..++.+++++|++.|.+ .+.++..|.|||++|+..++.+++++|+++|
T Consensus 64 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 64 KDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred cCCCCCcHHHHHHHcChHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 555555555555555555555555555544 3344555555555555555555555555554
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=1.1e-24 Score=161.47 Aligned_cols=127 Identities=25% Similarity=0.389 Sum_probs=89.5
Q ss_pred hcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHH
Q 037701 117 ENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLH 196 (358)
Q Consensus 117 ~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~ 196 (358)
....+.||||+|+.. ++.+++++|++.|++++..+..|.||||+|+..++.+++++|++.+++ .+.++..|.||||
T Consensus 10 ~~~~~~t~l~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~ 85 (136)
T 2jab_A 10 HGSDLGKKLLEAARA---GQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPLH 85 (136)
T ss_dssp --CHHHHHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHH
T ss_pred ccccccHHHHHHHHh---CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHH
Confidence 445566777777665 777777777777777777777777777777777777777777777666 4556667777777
Q ss_pred HHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhC
Q 037701 197 HAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHC 251 (358)
Q Consensus 197 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~ 251 (358)
+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|++.|
T Consensus 86 ~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 86 LAAFIGHLEIAEVLLKHGAD----VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHcCCHHHHHHHHHcCCC----CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 77777777777777777643 5566777777777777777777777777653
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=7.2e-24 Score=157.09 Aligned_cols=126 Identities=25% Similarity=0.297 Sum_probs=115.8
Q ss_pred CCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHH
Q 037701 154 GPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALH 233 (358)
Q Consensus 154 ~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~ 233 (358)
...+.||||+|+..|+.+++++|++.+.+ .+.++..|.||||+|+..++.+++++|++.+.+ ++..+..|.||||
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~d~~g~t~L~ 85 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD----VNAVDAIGFTPLH 85 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTCCCHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCcCCCCCCCHHH
Confidence 44588999999999999999999999887 577899999999999999999999999999854 7778999999999
Q ss_pred HHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCc
Q 037701 234 LAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENP 285 (358)
Q Consensus 234 ~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 285 (358)
+|+..++.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|
T Consensus 86 ~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 86 LAAFIGHLEIAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHcCCHHHHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999876 4889999999999999999999999999875
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.8e-23 Score=152.92 Aligned_cols=124 Identities=34% Similarity=0.485 Sum_probs=84.6
Q ss_pred CCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHH
Q 037701 121 KNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAY 200 (358)
Q Consensus 121 ~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~ 200 (358)
|.||||+|+.. ++.+++++|++.|++++..+..|.||||+|+..++.+++++|++.+.+ .+.++..|.||||+|+.
T Consensus 2 g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 2 GRTPLHLAARN---GHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCHHHHHHHH---TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHc---CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHHHHH
Confidence 56777777665 777777777777777777777777777777777777777777776665 44556666777777777
Q ss_pred cCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCC
Q 037701 201 LGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCP 252 (358)
Q Consensus 201 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~ 252 (358)
.++.+++++|++.+.+ ++.++..|.||+++|+..++.+++++|+++|+
T Consensus 78 ~~~~~~~~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGAD----VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp TTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred cChHHHHHHHHHcCCC----CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 7777777777766633 55556666667777766666667766666654
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=1.6e-25 Score=174.86 Aligned_cols=139 Identities=24% Similarity=0.267 Sum_probs=86.2
Q ss_pred CCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCC
Q 037701 71 DKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSA 150 (358)
Q Consensus 71 ~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~ 150 (358)
..|.||||+|+..|+.+++++|++ |++ ++..+..|.||||+|+.. ++.+++++|++.|+++
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~---------------~~~~d~~g~t~L~~A~~~---~~~~~v~~Ll~~ga~~ 102 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRD---------------VDAVDENGRTALLFVAGL---GSDKCVRLLAEAGADL 102 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSC---------------TTCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCC---------------CCCcCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCC
Confidence 345566666666666666666666 544 334566666666666554 6666666666666666
Q ss_pred CCCC-CCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCC
Q 037701 151 DHRG-PDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGM 229 (358)
Q Consensus 151 ~~~~-~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~ 229 (358)
+..+ ..|.||||+|+..++.+++++|++.|++ .+.++..|.||||+|+..++. . .+.
T Consensus 103 ~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~---------~------------~~~ 160 (183)
T 3deo_A 103 DHRDMRGGLTALHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALELAREILKT---------T------------PKG 160 (183)
T ss_dssp TCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHHHT---------C------------CCC
T ss_pred CcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCC-CcCCCCCCCCHHHHHHHhccC---------c------------ccc
Confidence 6665 5566666666666666666666666655 445666666666666654322 1 234
Q ss_pred CHHHHHHHcCcHHHHHHHHhh
Q 037701 230 TALHLAASQGYERVVRRIIRH 250 (358)
Q Consensus 230 t~l~~a~~~~~~~~v~~Ll~~ 250 (358)
+|+++|+..|..+++++|.++
T Consensus 161 ~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 161 NPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp SHHHHHHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHcCHHHHHHHHHHh
Confidence 666666666666666666543
No 92
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=7.6e-25 Score=179.00 Aligned_cols=170 Identities=21% Similarity=0.185 Sum_probs=134.8
Q ss_pred cCCCceehhhhccccccccchHHHHHHHHhhCccchhcccCCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHH
Q 037701 31 HEKNTVLHVNIASQQEGERVSTEFVEGILEMCPSLLLQVNDKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWI 110 (358)
Q Consensus 31 ~~~~t~l~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 110 (358)
..+.+++.++...|+ .+.+..+.. . ....+..|.||||+|+..|+.+++++|++ |++
T Consensus 13 ~~~~~~~l~~~~~g~---~~~~~~~~~----~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~------------ 69 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGH---SPSWVPSSY----I---AADVVSEYETPWWTAARKADEQALSQLLE-DRD------------ 69 (244)
T ss_dssp TTTEEEEEEEESSCC---CCEEEEGGG----S---CHHHHHHHHHHHHHHHTTTCHHHHHHTTT-TCC------------
T ss_pred CCCccHHHHHHHcCC---Ccccccccc----c---ccccccCCCCHHHHHHHcCCHHHHHHHHc-CCC------------
Confidence 456677888888887 554433322 1 22234568899999999999999999998 766
Q ss_pred HHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCC-CCCccHHHHHHhcCcHHHHHHHHHhCCcccccccC
Q 037701 111 RWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRG-PDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDR 189 (358)
Q Consensus 111 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~-~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~ 189 (358)
++..+..|.||||+|+.. ++.+++++|++.|++++..+ ..|.||||+|+..++.+++++|+++|++ .+.++.
T Consensus 70 ---~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~ 142 (244)
T 3ui2_A 70 ---VDAVDENGRTALLFVAGL---GSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD-IEVEDE 142 (244)
T ss_dssp ---TTCBCTTSCBHHHHHHHH---TCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCT
T ss_pred ---CCCcCCCCCCHHHHHHHC---CCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCC
Confidence 446788899999999776 89999999999999998888 7789999999999999999999998887 567888
Q ss_pred CCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhC
Q 037701 190 HGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHC 251 (358)
Q Consensus 190 ~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~ 251 (358)
.|.||||+|+..+. ...+.+||++|+..|+.+++++|++..
T Consensus 143 ~g~t~l~~A~~~~~---------------------~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 143 RGLTALELAREILK---------------------TTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp TCCCHHHHHHHHHT---------------------TCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHh---------------------ccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 99999999885321 235778999999999999999988763
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=4.7e-25 Score=180.23 Aligned_cols=172 Identities=22% Similarity=0.198 Sum_probs=143.4
Q ss_pred CCCCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCC
Q 037701 71 DKGDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSA 150 (358)
Q Consensus 71 ~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~ 150 (358)
..+.+++..++..|+.+.+..+...+.+ .+..|.||||+|+.. ++.++++.|++ |+++
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~------------------~~~~g~t~L~~A~~~---g~~~~v~~Ll~-~~~~ 70 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAAD------------------VVSEYETPWWTAARK---ADEQALSQLLE-DRDV 70 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCHH------------------HHHHHHHHHHHHHTT---TCHHHHHHTTT-TCCT
T ss_pred CCCccHHHHHHHcCCCcccccccccccc------------------cccCCCCHHHHHHHc---CCHHHHHHHHc-CCCC
Confidence 3456777777777776665554433322 345788999999665 99999999999 9999
Q ss_pred CCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCC
Q 037701 151 DHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMT 230 (358)
Q Consensus 151 ~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t 230 (358)
+.++..|.||||+|+..|+.+++++|++.|++.....+..|.||||+|+..|+.+++++|+++|++ ++..+..|.|
T Consensus 71 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~----~~~~d~~g~t 146 (244)
T 3ui2_A 71 DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD----IEVEDERGLT 146 (244)
T ss_dssp TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTCCC
T ss_pred CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCCCCCCCc
Confidence 999999999999999999999999999999985443348899999999999999999999999855 7788999999
Q ss_pred HHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCcc
Q 037701 231 ALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPY 286 (358)
Q Consensus 231 ~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 286 (358)
|||+|+..+ ....+.|||++|+..|+.+++++|++.+.
T Consensus 147 ~l~~A~~~~------------------~~~~~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 147 ALELAREIL------------------KTTPKGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp HHHHHHHHH------------------TTCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHH------------------hccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 999998632 12457899999999999999999998754
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=7.3e-24 Score=157.34 Aligned_cols=115 Identities=23% Similarity=0.301 Sum_probs=46.4
Q ss_pred CCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHH
Q 037701 154 GPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALH 233 (358)
Q Consensus 154 ~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~ 233 (358)
+..|.||||+|+..++.+++++|++.+.+ .+.++..|.||||+|+..++.+++++|++.+.+ ++..+..|.||||
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~ 81 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL----VNTTGYQNDSPLH 81 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCGGGCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc----ccCcCCCCCCHHH
Confidence 33444444444444444444444444333 233333444444444444444444444443322 3333333444444
Q ss_pred HHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCC
Q 037701 234 LAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLR 274 (358)
Q Consensus 234 ~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 274 (358)
+|+..++.+++++|++.+++ ++.+|..|.||+++|+..+.
T Consensus 82 ~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~ 121 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLSYGAS-RNAVNIFGLRPVDYTDDESM 121 (137)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGCCCHHH
T ss_pred HHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhccH
Confidence 44444444444444443332 23344444444444443333
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=3.9e-23 Score=161.29 Aligned_cols=142 Identities=25% Similarity=0.254 Sum_probs=125.7
Q ss_pred hcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCccccccc-CCCCCHH
Q 037701 117 ENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERD-RHGWTSL 195 (358)
Q Consensus 117 ~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~-~~~~t~l 195 (358)
.+..|.||||+|+.. ++.++++.|++ |.+++..+..|.||||+|+..++.+++++|++.|++. +.++ ..|.|||
T Consensus 40 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL 114 (183)
T 3deo_A 40 VVSEYETPWWTAARK---ADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTAL 114 (183)
T ss_dssp HHHHHHHHHHHHHHT---TCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHH
T ss_pred CCCCCCCHHHHHHHc---CCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHH
Confidence 456778999999765 99999999999 9999999999999999999999999999999999885 4455 8999999
Q ss_pred HHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCCh
Q 037701 196 HHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRG 275 (358)
Q Consensus 196 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 275 (358)
|+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++. ..+.+++++|+..|+.
T Consensus 115 ~~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~~~~ 172 (183)
T 3deo_A 115 HMAAGYVRPEVVEALVELGAD----IEVEDERGLTALELAREILKT------------------TPKGNPMQFGRRIGLE 172 (183)
T ss_dssp HHHHHTTCHHHHHHHHHHTCC----TTCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHHHcCCC----CcCCCCCCCCHHHHHHHhccC------------------cccccHHHHHHHcCHH
Confidence 999999999999999999855 778899999999999874322 3467999999999999
Q ss_pred hHHHHHhcCc
Q 037701 276 GVLKSLLENP 285 (358)
Q Consensus 276 ~~~~~Ll~~~ 285 (358)
+++++|.++.
T Consensus 173 ~i~~~L~~~~ 182 (183)
T 3deo_A 173 KVINVLEGQV 182 (183)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHHHhh
Confidence 9999998753
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=3.2e-23 Score=153.87 Aligned_cols=128 Identities=22% Similarity=0.282 Sum_probs=115.9
Q ss_pred hhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHH
Q 037701 116 VENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSL 195 (358)
Q Consensus 116 ~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l 195 (358)
.++..|.||||+|+.. ++.+++++|++.|++++..+..|.||||+|+..++.+++++|++.+.+ .+.++..|.|||
T Consensus 5 ~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L 80 (137)
T 3c5r_A 5 FTNHRGETLLHIASIK---GDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPL 80 (137)
T ss_dssp CCCTTCCCHHHHHHHH---TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHH
T ss_pred CcCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHH
Confidence 4788999999999877 999999999999999999999999999999999999999999999887 677899999999
Q ss_pred HHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhC
Q 037701 196 HHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHC 251 (358)
Q Consensus 196 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~ 251 (358)
|+|+..++.+++++|++.|++ ++.++..|.||+++|+..+..+++++|.+..
T Consensus 81 ~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 81 HDAAKNGHVDIVKLLLSYGAS----RNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 999999999999999999855 7788999999999999999999888777654
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=1.3e-23 Score=169.51 Aligned_cols=136 Identities=18% Similarity=0.086 Sum_probs=73.5
Q ss_pred cCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHH
Q 037701 188 DRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARH 267 (358)
Q Consensus 188 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~ 267 (358)
+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++....+++.+|..|.||||
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~ 145 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVG----VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALH 145 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCC----ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHH
Confidence 34455666666666666666666665533 45555666666666666666666666666533334556666666666
Q ss_pred HHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeecCCcchHHHHhhCC
Q 037701 268 FAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVPDSDMYEAVNKQN 330 (358)
Q Consensus 268 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~~~~~~~~g 330 (358)
+|+..|+.+++++|+++| ++++.+|..|.||||+|+..+...+ +.|+..|++.+..|..|
T Consensus 146 ~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLAKG---ARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp HHHHHTCHHHHHHHHHHT---CCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred HHHHcCCHHHHHHHHHcC---CCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence 666666666666666665 5666666666666666666665555 66666666665555544
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=2.2e-22 Score=169.10 Aligned_cols=144 Identities=15% Similarity=0.070 Sum_probs=101.1
Q ss_pred CCCCccHHHHHHhcCcHHHHHHHHHhCCccccc-----ccCCCCCHHHHHHHc---CCHHHHHHHhcCCCcccccccccC
Q 037701 154 GPDGLTTLHAAVICNAEDVIKLLLEKKKILTRE-----RDRHGWTSLHHAAYL---GHSNITSMMLKSEDDKIVALYKED 225 (358)
Q Consensus 154 ~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~-----~~~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~ 225 (358)
.....++|+.|+..++.+.++.|++.+.++... .+..|.||||+|+.. ++.+++++|++.|++ ++..+
T Consensus 148 ~~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad----vn~~d 223 (301)
T 2b0o_E 148 CTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH----LDAKA 223 (301)
T ss_dssp CC-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC----TTCCC
T ss_pred cCchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC----CCCCC
Confidence 334567788888888888777777777664322 567778888888876 677888888887744 66677
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHH
Q 037701 226 DRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVL 305 (358)
Q Consensus 226 ~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a 305 (358)
..|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|++++ ++ .|.||||+|
T Consensus 224 ~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g---a~------~g~tpLh~A 293 (301)
T 2b0o_E 224 ADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQ---AG------TFAFPLHVD 293 (301)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHH---HH------TTSSCCC--
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhc---CC------CCCChhHHH
Confidence 7788888888888888888888887665 4677788888888888888888888888777 44 467888888
Q ss_pred HHhCCC
Q 037701 306 AAACRD 311 (358)
Q Consensus 306 ~~~~~~ 311 (358)
+.+|..
T Consensus 294 ~~~g~~ 299 (301)
T 2b0o_E 294 YSWVIS 299 (301)
T ss_dssp ------
T ss_pred HhcCCc
Confidence 877643
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=1.6e-22 Score=169.86 Aligned_cols=138 Identities=17% Similarity=0.087 Sum_probs=113.3
Q ss_pred cCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccc------cCCCCCCHHHHHHHc---CcHHHHHHHHhhCCCCcccc
Q 037701 188 DRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYK------EDDRGMTALHLAASQ---GYERVVRRIIRHCPESYSIV 258 (358)
Q Consensus 188 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~------~~~~g~t~l~~a~~~---~~~~~v~~Ll~~~~~~~~~~ 258 (358)
.....++|+.|+..|+.+.++.|+..+.+ ++. .+..|.||||+|+.. ++.+++++|++++++ ++.+
T Consensus 148 ~~~~~~~L~~A~~~g~~~~v~~ll~~g~d----~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~ 222 (301)
T 2b0o_E 148 CTPEPQRLWTAICNRDLLSVLEAFANGQD----FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAK 222 (301)
T ss_dssp CC-CHHHHHHHHHTTCHHHHHHHHHTTCC----TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCC
T ss_pred cCchHHHHhhhhhccCHHHHHHHHhcCCc----ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCC
Confidence 34456789999999999999988888865 443 577889999999986 788999999998765 5788
Q ss_pred cCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeecCCcchHHHHhhCCCchhhHh
Q 037701 259 DNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVPDSDMYEAVNKQNTSVEHIV 337 (358)
Q Consensus 259 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~~~~~~~~g~t~l~~a 337 (358)
|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..++.++ ++|++.|++ .|.|||++|
T Consensus 223 d~~G~TpLh~A~~~g~~~~v~~Ll~~g---ad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A 293 (301)
T 2b0o_E 223 AADGNTALHYAALYNQPDCLKLLLKGR---ALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVD 293 (301)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTT---CCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHH
Confidence 889999999999999999999999988 8888899999999999999988888 888888886 688999998
Q ss_pred hh
Q 037701 338 RY 339 (358)
Q Consensus 338 ~~ 339 (358)
+.
T Consensus 294 ~~ 295 (301)
T 2b0o_E 294 YS 295 (301)
T ss_dssp --
T ss_pred Hh
Confidence 76
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=5.7e-23 Score=149.46 Aligned_cols=109 Identities=22% Similarity=0.323 Sum_probs=58.4
Q ss_pred cCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHH
Q 037701 120 EKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAA 199 (358)
Q Consensus 120 ~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~ 199 (358)
.|.||||+|+.. ++.+++++|++.|++++..+..|.||||+|+..++.+++++|++.+++ .+.++..|.||||+|+
T Consensus 6 ~~~~~l~~A~~~---~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 6 MCDKEFMWALKN---GDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAV 81 (123)
T ss_dssp -CHHHHHHHHHT---TCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHH
T ss_pred ccchHHHHHHHc---CCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHH
Confidence 444555555433 555555555555555555555555555555555555555555555544 3444555555555555
Q ss_pred HcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHH
Q 037701 200 YLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAA 236 (358)
Q Consensus 200 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~ 236 (358)
..++.+++++|++.+++ ++.++..|.||+|+|.
T Consensus 82 ~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGAD----KTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHCC
T ss_pred HcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHhC
Confidence 55555555555555532 4445555555555553
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=2.6e-22 Score=161.79 Aligned_cols=132 Identities=20% Similarity=0.268 Sum_probs=108.8
Q ss_pred HhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHh-CCcccccccCCCCC
Q 037701 115 LVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEK-KKILTRERDRHGWT 193 (358)
Q Consensus 115 ~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t 193 (358)
+..+..|.||||+|+.. ++.++++.|++.|++++.++..|.||||+|+..++.+++++|++. +.+ .+.++..|.|
T Consensus 67 ~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g~t 142 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKR---GNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLGDT 142 (222)
T ss_dssp HHHEEEESCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTSCC
T ss_pred ccccccccccccccccc---CcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCCCC
Confidence 35788899999999876 999999999999999999999999999999999999999999988 555 6778888999
Q ss_pred HHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCC
Q 037701 194 SLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPES 254 (358)
Q Consensus 194 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~ 254 (358)
|||+|+..|+.+++++|++.|++ ++.++..|.|||++|+..++.++++.|++.++..
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKGAR----TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCC----SCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC----CccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 99999999999999999988854 6778888899999998888888888888876553
No 102
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=4.3e-22 Score=144.78 Aligned_cols=115 Identities=19% Similarity=0.144 Sum_probs=102.7
Q ss_pred CCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHH
Q 037701 154 GPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALH 233 (358)
Q Consensus 154 ~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~ 233 (358)
+..|.||||+|+..++.+++++|++.+.+ .+.++..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~d~~g~tpL~ 78 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD----INAPDKHHITPLL 78 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC----TTCCCTTSCCHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCcCCCCCCCHHH
Confidence 45688999999999999999999999887 677899999999999999999999999999854 7788999999999
Q ss_pred HHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCC
Q 037701 234 LAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLR 274 (358)
Q Consensus 234 ~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~ 274 (358)
+|+..++.+++++|++.+++ ++.+|..|.||+|+|...+.
T Consensus 79 ~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~ 118 (123)
T 3aaa_C 79 SAVYEGHVSCVKLLLSKGAD-KTVKGPDGLTAFEATDNQAI 118 (123)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCCHHH
T ss_pred HHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHhCCHHH
Confidence 99999999999999999876 58899999999999954433
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=9.7e-22 Score=168.77 Aligned_cols=165 Identities=13% Similarity=0.051 Sum_probs=112.3
Q ss_pred CCCCccHHHHHHhc-CcHHHHHHHHHhCCccccccc--CCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCC
Q 037701 154 GPDGLTTLHAAVIC-NAEDVIKLLLEKKKILTRERD--RHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMT 230 (358)
Q Consensus 154 ~~~~~t~l~~a~~~-~~~~~v~~Ll~~~~~~~~~~~--~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t 230 (358)
...+.|+||.|+.. ++.+++++|++.|++ .+..+ ..|.||||+|+..|+.+++++|+++|++ ++..+..|.|
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gad-vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad----vn~~d~~G~T 270 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGAD-VNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN----VNQADSAGRG 270 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCC-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCC
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCC-CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC----CCCCCCCCCC
Confidence 33466899999999 999999999999888 45556 7899999999999999999999999854 7788999999
Q ss_pred HHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCC
Q 037701 231 ALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACR 310 (358)
Q Consensus 231 ~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~ 310 (358)
|||+|+..|+.+++++|++++++ ++..|..|.||||+|+..++.+++++|++.+.........+..+.|+++++.....
T Consensus 271 pLh~A~~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~~ 349 (368)
T 3jue_A 271 PLHHATILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSL 349 (368)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC------------------------
T ss_pred HHHHHHHcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHHh
Confidence 99999999999999999999876 48899999999999999999999999998876545555567778899998877653
Q ss_pred CCc---eeecCCcchHH
Q 037701 311 DSS---YFIVPDSDMYE 324 (358)
Q Consensus 311 ~~~---~~Ll~~g~~~~ 324 (358)
... +.|...+.+++
T Consensus 350 ~~~~~~ekl~r~~~~~~ 366 (368)
T 3jue_A 350 MASDDPEKLSRRSHDLH 366 (368)
T ss_dssp -----------------
T ss_pred hcCCCHHHHHhcCCCcC
Confidence 332 66666666554
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=1.2e-21 Score=162.84 Aligned_cols=205 Identities=16% Similarity=0.105 Sum_probs=145.2
Q ss_pred hcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHH
Q 037701 117 ENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLH 196 (358)
Q Consensus 117 ~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~ 196 (358)
.|..+.+.++.+.. .|+....+++...-.......+...... .....+-..+++................++|+
T Consensus 62 ~d~~~~~~l~~~~~---~GN~~~n~i~e~~l~~~~~~kP~~~s~~---~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~ 135 (278)
T 1dcq_A 62 LDVLGTSELLLAKN---IGNAGFNEIMECCLPSEDPVKPNPGSDM---IARKDYITAKYMERRYARKKHADTAAKLHSLC 135 (278)
T ss_dssp TSCCCGGGGHHHHH---SCHHHHHHHHTTTCCSSSCCSCCTTCCH---HHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHH
T ss_pred cCCCCHHHHHHHHH---cCcHHHHHHHHhhCChhhcCCCCCCCCH---HHHHHHHHHHHHHhhcccccccccchhhhhhh
Confidence 56778889988854 4777666655433222211111111111 11111112223322222212222233456899
Q ss_pred HHHHcCCHHHHHHHhcCCCccccc--ccccCCCCCCHHHHHHHc---CcHHHHHHHHhhCCCCcccccCCCCcHHHHHHH
Q 037701 197 HAAYLGHSNITSMMLKSEDDKIVA--LYKEDDRGMTALHLAASQ---GYERVVRRIIRHCPESYSIVDNRGWNARHFAMV 271 (358)
Q Consensus 197 ~a~~~~~~~~~~~Ll~~~~~~~~~--~~~~~~~g~t~l~~a~~~---~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 271 (358)
.|+..++.+.++.++..|.+.... ++..+..|.||||+|+.. ++.+++++|++++++ ++.+|..|.||||+|+.
T Consensus 136 ~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~TpLh~A~~ 214 (278)
T 1dcq_A 136 EAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTALHYCCL 214 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCHHHHHHH
T ss_pred hHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCHHHHHHH
Confidence 999999999999999988763322 555678899999999999 899999999999876 58899999999999999
Q ss_pred cCChhHHHHHhcCccccccccCCCCCCChHHHHHHHhCCCCc-eeecCCcchHHHHhhCCCchhhHhhh
Q 037701 272 SLRGGVLKSLLENPYVISLIHGRDKNGNTPLHVLAAACRDSS-YFIVPDSDMYEAVNKQNTSVEHIVRY 339 (358)
Q Consensus 272 ~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~~a~~~~~~~~-~~Ll~~g~~~~~~~~~g~t~l~~a~~ 339 (358)
.|+.+++++|+++| ++++.+|..|.||||+|+..++..+ ++|++.|+ +.++++.+..
T Consensus 215 ~g~~~~v~~Ll~~g---ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga--------~~~~~~~~v~ 272 (278)
T 1dcq_A 215 TDNAECLKLLLRGK---ASIEIANESGETPLDIAKRLKHEHCEELLTQALS--------GRFNSHVHVE 272 (278)
T ss_dssp TTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT--------TCCCSSCCCC
T ss_pred cCCHHHHHHHHHcC---CCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC--------CCCCcceeee
Confidence 99999999999998 8999999999999999999999888 99988877 4566665543
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=7.4e-21 Score=130.79 Aligned_cols=90 Identities=34% Similarity=0.508 Sum_probs=46.6
Q ss_pred CCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCC
Q 037701 73 GDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADH 152 (358)
Q Consensus 73 g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~ 152 (358)
|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+.. ++.+++++|++.|++++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~---------------~n~~d~~g~t~L~~A~~~---~~~~~v~~Ll~~ga~~~~ 63 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD---------------VNAKDKNGRTPLHLAARN---GHLEVVKLLLEAGADVNA 63 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCC---------------TTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTTCCTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC---------------CcccCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCc
Confidence 45555555555555555555555544 223445555555555433 555555555555555555
Q ss_pred CCCCCccHHHHHHhcCcHHHHHHHHHhC
Q 037701 153 RGPDGLTTLHAAVICNAEDVIKLLLEKK 180 (358)
Q Consensus 153 ~~~~~~t~l~~a~~~~~~~~v~~Ll~~~ 180 (358)
++..|.||||+|+..++.+++++|++.|
T Consensus 64 ~d~~g~t~l~~A~~~~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 64 KDKNGRTPLHLAARNGHLEVVKLLLEAG 91 (93)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 5555555555555555555555555544
No 106
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=2.6e-21 Score=138.85 Aligned_cols=106 Identities=21% Similarity=0.265 Sum_probs=64.7
Q ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCccccccccCCCCCCChHHH
Q 037701 224 EDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPLH 303 (358)
Q Consensus 224 ~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL~ 303 (358)
+|..|.||||+|+..|+.+++++|++.+.+ ++..|..|.||||+|+..++.+++++|+++| ++++.+|..|.||||
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKG---ADVNARSKDGNTPEH 80 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT---CCTTCCCTTCCCTTH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC---CCCcccCCCCCCHHH
Confidence 355566666666666666666666666544 3555666666666666666666666666665 556666666666666
Q ss_pred HHHHhCCCCc-eeecCCcchHHHHhhCCCch
Q 037701 304 VLAAACRDSS-YFIVPDSDMYEAVNKQNTSV 333 (358)
Q Consensus 304 ~a~~~~~~~~-~~Ll~~g~~~~~~~~~g~t~ 333 (358)
+|+..++..+ ++|++.|+|++.++..|.+|
T Consensus 81 ~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 81 LAKKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp HHHTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HHHHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 6666665555 66666666666666666655
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=7.2e-20 Score=152.02 Aligned_cols=125 Identities=18% Similarity=0.137 Sum_probs=94.2
Q ss_pred CccHHHHHHhcCcHHHHHHHHHhCCccc-----ccccCCCCCHHHHHHHc---CCHHHHHHHhcCCCcccccccccCCCC
Q 037701 157 GLTTLHAAVICNAEDVIKLLLEKKKILT-----RERDRHGWTSLHHAAYL---GHSNITSMMLKSEDDKIVALYKEDDRG 228 (358)
Q Consensus 157 ~~t~l~~a~~~~~~~~v~~Ll~~~~~~~-----~~~~~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~g 228 (358)
..++|+.|+..+..+.++.++..|.+.. +..+..|.||||+|+.. ++.+++++|++.|++ ++.++..|
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~----in~~d~~g 205 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN----LDKQTGKG 205 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC----TTCCCTTC
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC----ccccCCCC
Confidence 3467778888888887777777776642 23367778888888877 777888888887744 66677788
Q ss_pred CCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHHcCChhHHHHHhcCcc
Q 037701 229 MTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMVSLRGGVLKSLLENPY 286 (358)
Q Consensus 229 ~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 286 (358)
.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|.
T Consensus 206 ~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 206 STALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 8888888888888888888887665 47777888888888888888888888887774
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=1e-20 Score=170.41 Aligned_cols=134 Identities=24% Similarity=0.247 Sum_probs=118.0
Q ss_pred CCchhHHHHhcCCcHHHHHHHHHHHhhhHhhhcchhHHHHHHHhhcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCC
Q 037701 73 GDTPLHVAAKCRHPAVVEVLIKFAKKQSRELESGVDWIRWMLLVENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADH 152 (358)
Q Consensus 73 g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~ 152 (358)
..+.||.|+..|+.++|+.|++.|++.+.... ....+..|.||||+|+..+..++.+++++|+++|+++|.
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~---------~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~ 202 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLP---------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA 202 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBC---------CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCC---------CcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCc
Confidence 34779999999999999999999988442110 001378899999999875556999999999999999999
Q ss_pred CCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCc
Q 037701 153 RGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDD 216 (358)
Q Consensus 153 ~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~ 216 (358)
+|..|.||||+|+..|+.+++++|++.|++ .+.++..|.||||+|+..|+.+++++|++.|++
T Consensus 203 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 265 (497)
T 3lvq_E 203 KAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG 265 (497)
T ss_dssp CCSSSCCHHHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999999999999999999999999998 678899999999999999999999999999975
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.83 E-value=9.2e-20 Score=125.27 Aligned_cols=91 Identities=33% Similarity=0.472 Sum_probs=66.5
Q ss_pred CCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHH
Q 037701 121 KNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAY 200 (358)
Q Consensus 121 ~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~ 200 (358)
|.||||+|+.. ++.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|++ .+.++..|.||||+|+.
T Consensus 2 g~t~L~~A~~~---~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~ 77 (93)
T 1n0q_A 2 GRTPLHLAARN---GHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAAR 77 (93)
T ss_dssp -CCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred CCcHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHH
Confidence 56777777665 777777777777777777777777777777777777777777777766 45667777777777777
Q ss_pred cCCHHHHHHHhcCCC
Q 037701 201 LGHSNITSMMLKSED 215 (358)
Q Consensus 201 ~~~~~~~~~Ll~~~~ 215 (358)
.|+.+++++|++.|+
T Consensus 78 ~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 78 NGHLEVVKLLLEAGA 92 (93)
T ss_dssp TTCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHcCC
Confidence 777777777777664
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=1.2e-19 Score=163.56 Aligned_cols=135 Identities=17% Similarity=0.158 Sum_probs=113.6
Q ss_pred CcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCC------CCCCccHHHHHHh---cCcHHHHHHHHHhCCcccccccCCCC
Q 037701 122 NTALHEAVQSAAKGSVEMVAEILENCPSADHR------GPDGLTTLHAAVI---CNAEDVIKLLLEKKKILTRERDRHGW 192 (358)
Q Consensus 122 ~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~------~~~~~t~l~~a~~---~~~~~~v~~Ll~~~~~~~~~~~~~~~ 192 (358)
.+.||.|+.. ++.+.++.|++.|++++.. +..|.||||+|+. .|+.+++++|++.|++ .+.++..|.
T Consensus 133 ~~~L~~A~~~---g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~g~ 208 (497)
T 3lvq_E 133 PQRLWTAICN---RDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGN 208 (497)
T ss_dssp HHHHHHHHHH---TCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSSSC
T ss_pred HHHHHHHHhc---cCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCCCC
Confidence 3679999877 9999999999999999877 7889999999966 8999999999999988 678899999
Q ss_pred CHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcHHHHHHH
Q 037701 193 TSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNARHFAMV 271 (358)
Q Consensus 193 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 271 (358)
||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.+++++|++.+++. +. +|+|.+..
T Consensus 209 TpLh~A~~~g~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~-~~------~~~h~~~~ 276 (497)
T 3lvq_E 209 TALHYAALYNQPDCLKLLLKGRAL----VGTVNEAGETALDIARKKHHKECEELLEQAQAGT-FA------FPLHVDYS 276 (497)
T ss_dssp CHHHHHTTTTCHHHHHHHHHTCCC----CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-------------------
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC-CC------Ccceeecc
Confidence 999999999999999999999965 7888999999999999999999999999998775 32 56666543
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.82 E-value=9.8e-20 Score=156.32 Aligned_cols=148 Identities=20% Similarity=0.204 Sum_probs=116.1
Q ss_pred hcccCCcHHHHHHHHHhC-CcHHHHHHHHhcCCCCCCCC--CCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCC
Q 037701 117 ENEEKNTALHEAVQSAAK-GSVEMVAEILENCPSADHRG--PDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWT 193 (358)
Q Consensus 117 ~~~~~~t~l~~a~~~~~~-~~~~~~~~Ll~~~~~~~~~~--~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 193 (358)
....+.|+||.| +.. ++.++++.|++.|++++..+ ..|.||||+|+..++.+++++|++.|++ .+..+..|.|
T Consensus 195 ~~~~~~t~L~~A---a~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~T 270 (368)
T 3jue_A 195 GSLHPGALLFRA---SGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAGRG 270 (368)
T ss_dssp --CCHHHHHHHH---TSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred ccCCCCcHHHHH---HHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCC
Confidence 344566899999 556 99999999999999999988 7899999999999999999999999988 6788999999
Q ss_pred HHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCc--ccccCCCCcHHHHHHH
Q 037701 194 SLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESY--SIVDNRGWNARHFAMV 271 (358)
Q Consensus 194 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~--~~~~~~g~t~l~~a~~ 271 (358)
|||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+..+.... ...+..+.|+++.+..
T Consensus 271 pLh~A~~~g~~~~v~~LL~~Gad----~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 271 PLHHATILGHTGLACLFLKRGAD----LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred HHHHHHHcCcHHHHHHHHHCcCC----CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence 99999999999999999999855 78889999999999999999999999998763321 2344567777777654
Q ss_pred c
Q 037701 272 S 272 (358)
Q Consensus 272 ~ 272 (358)
.
T Consensus 347 ~ 347 (368)
T 3jue_A 347 F 347 (368)
T ss_dssp -
T ss_pred H
Confidence 3
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.81 E-value=4.6e-20 Score=132.28 Aligned_cols=109 Identities=23% Similarity=0.290 Sum_probs=90.8
Q ss_pred cccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCCHHHHHHHcCcHHHHHHHHhhCCCCcccccCCCCcH
Q 037701 186 ERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMTALHLAASQGYERVVRRIIRHCPESYSIVDNRGWNA 265 (358)
Q Consensus 186 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 265 (358)
.++..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|++.+++ ++.+|..|.||
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tp 78 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD----VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTP 78 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC----SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCH
Confidence 4577888999999998999999999888754 677788889999999999999999999988766 47788889999
Q ss_pred HHHHHHcCChhHHHHHhcCccccccccCCCCCCChHH
Q 037701 266 RHFAMVSLRGGVLKSLLENPYVISLIHGRDKNGNTPL 302 (358)
Q Consensus 266 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~g~tpL 302 (358)
||+|+..++.+++++|+++| ++++.++..|.+|-
T Consensus 79 l~~A~~~~~~~~~~~Ll~~g---a~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 79 EHLAKKNGHHEIVKLLDAKG---ADVNARSWGSSHHH 112 (115)
T ss_dssp THHHHTTTCHHHHHHHHTTS---SSHHHHSCCCC---
T ss_pred HHHHHHCCCHHHHHHHHHcC---CCCCcCCccccccc
Confidence 99999999999999999988 88888888888773
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.73 E-value=5.1e-18 Score=120.33 Aligned_cols=90 Identities=23% Similarity=0.330 Sum_probs=42.7
Q ss_pred hcccCCcHHHHHHHHHhCCcHHHHHHHHhcCCCCCCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHH
Q 037701 117 ENEEKNTALHEAVQSAAKGSVEMVAEILENCPSADHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLH 196 (358)
Q Consensus 117 ~~~~~~t~l~~a~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~ 196 (358)
.+.+|.||||+|+.. ++.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|++ .+.++..|.||||
T Consensus 20 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 20 MGSDLGKKLLEAARA---GQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKTAFD 95 (110)
T ss_dssp --CCHHHHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred cCCccchHHHHHHHc---CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccCCCcHHH
Confidence 344444445544433 444555555544444444444455555555555555555555544444 3344444555555
Q ss_pred HHHHcCCHHHHHHH
Q 037701 197 HAAYLGHSNITSMM 210 (358)
Q Consensus 197 ~a~~~~~~~~~~~L 210 (358)
+|+..|+.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 55555555544443
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.71 E-value=6.8e-17 Score=114.48 Aligned_cols=92 Identities=26% Similarity=0.420 Sum_probs=82.4
Q ss_pred CCCCCCCccHHHHHHhcCcHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHhcCCCcccccccccCCCCCC
Q 037701 151 DHRGPDGLTTLHAAVICNAEDVIKLLLEKKKILTRERDRHGWTSLHHAAYLGHSNITSMMLKSEDDKIVALYKEDDRGMT 230 (358)
Q Consensus 151 ~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t 230 (358)
...+.+|.||||+|+..++.+++++|++.+++ .+.++..|.||||+|+..|+.+++++|++.|++ ++.++..|.|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~t 92 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD----VXAQDKFGKT 92 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCC
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccccCCCc
Confidence 34577899999999999999999999999887 677899999999999999999999999999854 7788999999
Q ss_pred HHHHHHHcCcHHHHHHH
Q 037701 231 ALHLAASQGYERVVRRI 247 (358)
Q Consensus 231 ~l~~a~~~~~~~~v~~L 247 (358)
|||+|+..|+.+++++|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999987
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=56.74 E-value=1.7 Score=22.58 Aligned_cols=18 Identities=22% Similarity=0.589 Sum_probs=12.5
Q ss_pred hhhcccccCCchhhhhhh
Q 037701 4 DLYRDAAKGEIEPFNEIA 21 (358)
Q Consensus 4 ~L~~A~~~g~~~~~~~ll 21 (358)
.++.|+..||++.++.|=
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 466777777777777663
No 116
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=22.45 E-value=53 Score=27.44 Aligned_cols=28 Identities=18% Similarity=0.219 Sum_probs=16.3
Q ss_pred cccCCCCCHHHHHHHcCCHHHHHHHhcC
Q 037701 186 ERDRHGWTSLHHAAYLGHSNITSMMLKS 213 (358)
Q Consensus 186 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 213 (358)
..|..|+-.+..+...+.++..+.+++.
T Consensus 212 ~~d~~Gn~ViQ~~l~~~~~~~~~~i~~~ 239 (351)
T 3gvo_A 212 VQDQYGNYVIQHVLEHGRPEDKSKIVSE 239 (351)
T ss_dssp HTSTTHHHHHHHHHHHSCHHHHHHHHHT
T ss_pred CCCchHHHHHHHHHHhCchhhHHHHHHH
Confidence 3456666666666666666555555543
Done!