Query 037706
Match_columns 394
No_of_seqs 156 out of 1342
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 05:29:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037706.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037706hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 6.9E-57 2.4E-61 444.2 22.0 332 2-379 35-399 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 8.3E-53 2.8E-57 415.0 27.1 329 2-385 36-399 (403)
3 1t6e_X Xylanase inhibitor; two 100.0 2.2E-52 7.5E-57 409.0 24.3 322 4-380 26-374 (381)
4 1tzs_A Cathepsin E; hydrolase, 100.0 4.5E-51 1.5E-55 395.5 25.2 289 2-384 38-347 (351)
5 2x0b_A Renin; hydrolase-hormon 100.0 2.4E-51 8.3E-56 400.6 17.3 285 2-379 76-383 (383)
6 1mpp_A Pepsin; hydrolase(acid 100.0 3.7E-51 1.3E-55 397.7 18.5 287 2-383 33-359 (361)
7 3psg_A Pepsinogen; hydrolase(a 100.0 1.5E-50 5.1E-55 394.0 20.2 279 2-379 71-370 (370)
8 3c9x_A Trichoderma reesei aspa 100.0 2.9E-50 9.9E-55 386.5 21.7 281 2-378 30-329 (329)
9 3cms_A Chymosin B; hydrolase, 100.0 9.8E-51 3.4E-55 388.9 18.4 275 2-379 29-323 (323)
10 1oew_A Endothiapepsin; hydrola 100.0 4.3E-50 1.5E-54 385.3 21.0 280 2-378 30-329 (329)
11 1j71_A Candidapepsin, aspartic 100.0 2.2E-50 7.6E-55 388.1 18.9 283 2-382 27-327 (334)
12 2qzx_A Candidapepsin-5; aspart 100.0 3.3E-50 1.1E-54 388.2 19.7 292 2-383 27-335 (342)
13 3fv3_A SAPP1P-secreted asparti 100.0 5.6E-50 1.9E-54 386.2 21.3 280 2-383 27-333 (339)
14 3pvk_A Candidapepsin-2; hydrol 100.0 2.9E-50 1E-54 388.6 18.7 293 2-383 27-335 (342)
15 1dpj_A Proteinase A; proteinas 100.0 1.2E-49 4.3E-54 382.2 22.7 281 2-379 28-329 (329)
16 1ibq_A Aspergillopepsin; aspar 100.0 8.4E-50 2.9E-54 382.7 21.4 280 2-379 27-325 (325)
17 1am5_A Pepsin, acid proteinase 100.0 7.3E-50 2.5E-54 383.0 20.0 277 2-379 27-324 (324)
18 1htr_B Gastricsin; aspartyl pr 100.0 5.8E-50 2E-54 384.5 18.8 281 2-379 27-329 (329)
19 2apr_A Rhizopuspepsin; hydrola 100.0 1.2E-49 4.3E-54 381.5 20.6 277 2-379 30-324 (325)
20 1yg9_A Aspartic protease BLA G 100.0 9.4E-50 3.2E-54 383.0 18.9 280 2-379 30-329 (330)
21 4aa9_A Chymosin; hydrolase, as 100.0 6.4E-50 2.2E-54 382.8 17.2 275 2-379 26-320 (320)
22 1izd_A Aspartic proteinase; su 100.0 2.7E-49 9.1E-54 378.8 19.7 276 2-378 28-322 (323)
23 2ewy_A Beta-secretase 2; BACE2 100.0 6.4E-49 2.2E-53 385.0 21.1 305 2-384 28-360 (383)
24 1bxo_A Protein (penicillopepsi 100.0 2.6E-49 9E-54 378.9 17.7 277 2-379 28-323 (323)
25 3k1w_A Renin; protease, altern 100.0 2.5E-49 8.5E-54 382.0 16.1 285 2-379 33-340 (341)
26 1miq_A Plasmepsin; aspartic pr 100.0 1E-48 3.5E-53 381.7 18.8 276 2-379 77-374 (375)
27 2qp8_A Beta-secretase 1; BACE1 100.0 2.7E-48 9.3E-53 381.9 21.9 306 2-384 36-372 (395)
28 1qdm_A Prophytepsin; aspartic 100.0 1.9E-48 6.5E-53 390.1 20.2 302 2-378 67-477 (478)
29 3vf3_A Beta-secretase 1; struc 100.0 3.7E-48 1.3E-52 381.9 20.6 309 2-385 43-380 (402)
30 3lpj_A Beta-secretase 1; alzhe 100.0 8.5E-48 2.9E-52 384.9 20.9 309 2-384 89-425 (455)
31 2bju_A Plasmepsin II; aspartic 100.0 5E-48 1.7E-52 383.5 16.2 276 2-379 153-450 (453)
32 3qvc_A Histo-aspartic protease 100.0 2.5E-47 8.4E-52 378.9 18.3 276 2-379 152-449 (451)
33 1wkr_A Polyporopepsin; hydrola 100.0 1.3E-46 4.5E-51 362.8 19.1 286 2-384 27-338 (340)
34 1lya_B Cathepsin D; lysosomal 100.0 1.9E-36 6.6E-41 277.8 16.5 220 122-379 3-241 (241)
35 1b5f_A Protein (cardosin A); h 100.0 2.8E-36 9.4E-41 276.2 12.3 195 2-267 28-238 (239)
36 1b5f_B Protein (cardosin A); h 99.6 2.2E-16 7.5E-21 120.7 6.3 76 300-379 11-87 (87)
37 1lya_A Cathepsin D; lysosomal 99.6 8.2E-16 2.8E-20 119.6 5.0 65 2-115 28-96 (97)
38 2i1a_A DNA damage-inducible pr 65.8 6.1 0.00021 31.7 4.2 27 351-377 109-135 (148)
39 3s8i_A Protein DDI1 homolog 1; 62.2 5.6 0.00019 32.3 3.3 28 351-378 108-135 (148)
40 1lya_A Cathepsin D; lysosomal 51.9 12 0.0004 27.8 3.3 16 241-256 29-44 (97)
41 3vla_A EDGP; extracellular, in 28.4 46 0.0016 31.6 4.1 46 193-256 6-51 (413)
42 1mpp_A Pepsin; hydrolase(acid 28.1 50 0.0017 30.5 4.3 43 193-256 5-49 (361)
43 1bxo_A Protein (penicillopepsi 26.4 49 0.0017 30.0 3.8 16 242-257 30-45 (323)
44 3cms_A Chymosin B; hydrolase, 26.3 38 0.0013 30.8 3.1 16 241-256 30-45 (323)
45 1izd_A Aspartic proteinase; su 25.4 53 0.0018 29.9 3.8 16 242-257 30-45 (323)
46 1yg9_A Aspartic protease BLA G 22.7 54 0.0018 29.9 3.3 15 242-256 32-46 (330)
47 1ibq_A Aspergillopepsin; aspar 22.1 54 0.0019 29.8 3.2 16 242-257 29-44 (325)
48 3slz_A GAG-Pro-POL polyprotein 21.7 70 0.0024 25.2 3.3 26 215-256 25-50 (132)
49 2hs1_A HIV-1 protease; ultra-h 21.2 69 0.0023 23.9 3.0 30 210-255 6-35 (99)
50 3c9x_A Trichoderma reesei aspa 20.2 77 0.0026 28.8 3.8 17 241-257 31-47 (329)
51 1fmb_A EIAV protease; hydrolas 20.1 69 0.0024 24.0 2.8 33 210-258 6-38 (104)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=6.9e-57 Score=444.19 Aligned_cols=332 Identities=23% Similarity=0.416 Sum_probs=259.5
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL 81 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~ 81 (394)
|.|+|||||+++||+|. +| .+|+||+.+.|.++.|...... .|. .|....
T Consensus 35 ~~v~~DTGS~~lWv~c~----~c-----------------~~Sst~~~v~C~s~~C~~~~~~-----~~~--~c~s~~-- 84 (413)
T 3vla_A 35 ENLVVDLGGRFLWVDCD----QN-----------------YVSSTYRPVRCRTSQCSLSGSI-----ACG--DCFNGP-- 84 (413)
T ss_dssp EEEEEETTCSSEEEECS----SS-----------------CCCTTCEECBTTSHHHHHTTCC-----EEE--CCSSCC--
T ss_pred eEEEEeCCChhhhcccC----CC-----------------CCCCCcCccCCCcccccccccC-----CCc--ccccCC--
Confidence 78999999999999998 44 2689999999999999876543 231 122110
Q ss_pred CCCC-CCCCCCcEEee-cCCCeEEEEEEEEEEEeecCCCC---ceeecCcEEEecccCCC-----CCcceEeecCCCCCC
Q 037706 82 KSTC-CRPCPSFAYTY-GEGGLVTGILTRDTLKVHGSSPG---IIREIPKFCFGCVGSTY-----REPIGIAGFGRGALS 151 (394)
Q Consensus 82 ~~~~-~~~c~~~~i~Y-g~Gs~~~G~~~~D~v~l~~~~~~---~~~~~~~~~fg~~~~~~-----~~~dGIlGLg~~~~S 151 (394)
...| ++.|. |.+.| ++|+.++|++++|+|+|++.++. ..+++++++|||+..+. ..+|||||||++.+|
T Consensus 85 ~~~c~~~~c~-~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~lS 163 (413)
T 3vla_A 85 RPGCNNNTCG-VFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIA 163 (413)
T ss_dssp BTTBCSSEEE-ECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSSSS
T ss_pred CCCCCCCcCc-ceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCCcc
Confidence 1123 45688 99999 58887779999999999853322 12678899999998752 247999999999999
Q ss_pred hhhhhcc---CCCceEEeccCccCCCCCCCCccEEEcccCcC------CCCC-ceeecCccCCCCC----------CceE
Q 037706 152 VPSQLGF---LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS------SKDN-LQFTPMLKSPMYP----------NYYY 211 (394)
Q Consensus 152 ~~~ql~~---~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~------~~~~-~~~~p~~~~~~~~----------~~y~ 211 (394)
++.||.. ++++|||||.+. ...+|.|+||++|.. +.++ +.|+||+.++..+ .+|.
T Consensus 164 l~sql~~~~~i~~~FS~cL~~~-----~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~ 238 (413)
T 3vla_A 164 LPSQFASAFSFKRKFAMCLSGS-----TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYF 238 (413)
T ss_dssp HHHHHHHHHTCCSEEEEECCSC-----SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCE
T ss_pred hHHHHhhhcCCCceEEEeCCCC-----CCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEE
Confidence 9999986 579999999973 246899999999863 3567 9999999875332 6899
Q ss_pred EEeeEEEECCEEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhc--cCCCCcccccccCCCCccC
Q 037706 212 IGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTIT--YYPRAKEVEERTGFDLCYR 289 (394)
Q Consensus 212 v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~--~~~~~~~~~~~~~~~~C~~ 289 (394)
|.|++|+||++ .+.++...+.+.+.+.+++||||||++++||+++|++|+++|.+++. .+.+. +....+..||.
T Consensus 239 V~l~~IsVgg~-~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~---~~~~~~~~C~~ 314 (413)
T 3vla_A 239 IGVKSIKINSK-IVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRV---ASVAPFGACFS 314 (413)
T ss_dssp ECCCEEEETTE-EECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEE---CCCTTCSCEEE
T ss_pred EEEEEEEECCE-EccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcC---CCCCCCcceec
Confidence 99999999999 99888777766655678899999999999999999999999998764 22221 12234679998
Q ss_pred CCCCCCCCCCCCCCeEEEEEeC-CeEEEecCCCeEEEecCCCCCCceEEEEEEeCCCCCCCCceeecccceeeeEEEEeC
Q 037706 290 VPCPNNTFTDDLFPSITFHFLN-NVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDL 368 (394)
Q Consensus 290 ~~~~~~~~~~~~~P~i~f~f~g-g~~~~i~~~~y~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~ 368 (394)
.++...+.....+|+|+|+|+| ++.|+|++++|+++.. .+..|++|+..... .++.||||++|||++|+|||+
T Consensus 315 ~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~-----~~~~Cl~~~~~~~~-~~~~~IlGd~fl~~~~vvfD~ 388 (413)
T 3vla_A 315 TDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIN-----DNVVCLGVVDGGSN-LRTSIVIGGHQLEDNLVQFDL 388 (413)
T ss_dssp CTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEE-----TTEEEECEEEEESS-CSSSEEECHHHHTTEEEEEET
T ss_pred cCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeC-----CCcEEEEEEecCCC-cccceeEehhhhcCeEEEEEC
Confidence 8432111112479999999976 4899999999999764 35789988865432 235899999999999999999
Q ss_pred CCCEEEEecCC
Q 037706 369 EKERIGFQPMD 379 (394)
Q Consensus 369 ~~~riGfa~~~ 379 (394)
+|+|||||++.
T Consensus 389 ~~~riGfa~~~ 399 (413)
T 3vla_A 389 ATSRVGFSGTL 399 (413)
T ss_dssp TTTEEEEEEEG
T ss_pred CCCEEEEEEec
Confidence 99999999843
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=8.3e-53 Score=414.97 Aligned_cols=329 Identities=22% Similarity=0.431 Sum_probs=247.4
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL 81 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~ 81 (394)
|.|+|||||+++||+|. +| .+|+||+.+.|.++.|...... .|. .|.++.
T Consensus 36 ~~v~~DTGSs~lWv~~~----~~-----------------~~Sst~~~~~C~s~~C~~~~~~-----~c~--~c~~~~-- 85 (403)
T 3aup_A 36 VPVLVDLNGNHLWVNCE----QQ-----------------YSSKTYQAPFCHSTQCSRANTH-----QCL--SCPAAS-- 85 (403)
T ss_dssp EEEEEETTCSSEEEECS----SC-----------------CCCSSCBCCCTTBHHHHHTTCC-----CEE--ECSSSC--
T ss_pred eEEEEECCCCceeECCC----CC-----------------CCCCCCCccCCCCccccCcccc-----Ccc--ccCCCC--
Confidence 78999999999999998 33 3789999999999999876543 232 232221
Q ss_pred CCCC-CCCCCCcEEeec-CCCeEEEEEEEEEEEeecCCCC-----ceeecCcEEEecccCCC------CCcceEeecCCC
Q 037706 82 KSTC-CRPCPSFAYTYG-EGGLVTGILTRDTLKVHGSSPG-----IIREIPKFCFGCVGSTY------REPIGIAGFGRG 148 (394)
Q Consensus 82 ~~~~-~~~c~~~~i~Yg-~Gs~~~G~~~~D~v~l~~~~~~-----~~~~~~~~~fg~~~~~~------~~~dGIlGLg~~ 148 (394)
+..| +..|. |.+.|+ +|+.++|.+++|+|+|++.++. ..++++++.|||+..+. ...+||||||+.
T Consensus 86 ~s~~~~~~~~-~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~ 164 (403)
T 3aup_A 86 RPGCHKNTCG-LMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHA 164 (403)
T ss_dssp BTTBCSSEEE-EEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSS
T ss_pred CCCCCCCcce-eEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCC
Confidence 1123 45788 999998 7887889999999999874321 12578899999998752 247999999999
Q ss_pred CCChhhhhcc---CCCceEEeccCccCCCCCCCCccEEEcccCcC-C--C-C-----CceeecCccCCCCCCceEEEeeE
Q 037706 149 ALSVPSQLGF---LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-S--K-D-----NLQFTPMLKSPMYPNYYYIGLEA 216 (394)
Q Consensus 149 ~~S~~~ql~~---~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~--~-~-----~~~~~p~~~~~~~~~~y~v~l~~ 216 (394)
.+|++.|+.. .+++||+||.+. ....|.|+||+ |+. + . | ++.|+|++.++. .+|.|.|++
T Consensus 165 ~~s~~~ql~~~~~~~~~FS~~L~~~-----~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~--~~y~v~l~~ 236 (403)
T 3aup_A 165 PISLPNQLASHFGLQRQFTTCLSRY-----PTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQ--GEYNVRVNS 236 (403)
T ss_dssp TTSHHHHHHHHHTCCSEEEEECCSC-----TTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTT--SCEEECEEE
T ss_pred CcCHHHHHHhhcCCCCeEEEEcCCC-----CCCCeeEEECC-CchhccccccccccCceeecccccCCC--CcceEEEEE
Confidence 9999999976 468999999873 24689999999 765 3 3 4 899999987642 489999999
Q ss_pred EEECCEEee-eecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCC
Q 037706 217 ITIGNSSLT-EVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNN 295 (394)
Q Consensus 217 i~v~~~~~~-~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 295 (394)
|.|+++ .+ .++...+.++..+.+++||||||++++||+++|++|+++|.+++..+.++. ....+..||..
T Consensus 237 i~v~g~-~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~---~~~~~~~c~~c----- 307 (403)
T 3aup_A 237 IRINQH-SVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVK---SVAPFGLCFNS----- 307 (403)
T ss_dssp EEETTE-EEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEEC---CCTTCSCEECG-----
T ss_pred EEECCE-EcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccC---CCCCCCceEEC-----
Confidence 999999 88 666655555445567899999999999999999999999987765322211 11234577754
Q ss_pred CCCCCCCCeEEEEEeCC--eEEEecCCCeEEEecCCCCCCceEEEEEEeCCCCCCCCceeecccceeeeEEEEeCCCCEE
Q 037706 296 TFTDDLFPSITFHFLNN--VSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERI 373 (394)
Q Consensus 296 ~~~~~~~P~i~f~f~gg--~~~~i~~~~y~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~ri 373 (394)
+. ...+|+|+|+|.|+ +.|+|++++|+++.. .+..|++|+..... ..+.||||++|||++|+|||++|+||
T Consensus 308 ~~-~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~-----~~~~C~~~~~~~~~-~~~~~ILG~~fl~~~yvvfD~~~~rI 380 (403)
T 3aup_A 308 NK-INAYPSVDLVMDKPNGPVWRISGEDLMVQAQ-----PGVTCLGVMNGGMQ-PRAEITLGARQLEENLVVFDLARSRV 380 (403)
T ss_dssp GG-CCCCCCEEEEESSTTCCEEEECHHHHEEEC--------CEEECEEECCSC-CSSSEEECHHHHTTSCEEEETTTTEE
T ss_pred CC-cCcCCcEEEEEcCCCceEEEEcccceEEEcC-----CCeEEEEEEcCCCC-CCCcEEEChHHhcCeEEEEECCCCEE
Confidence 11 23789999999765 699999999998753 24689998876532 23579999999999999999999999
Q ss_pred EE-------ecCCCcchhh
Q 037706 374 GF-------QPMDCASTAS 385 (394)
Q Consensus 374 Gf-------a~~~c~~~~~ 385 (394)
|| ++.+|+.+..
T Consensus 381 Gf~A~~~~~~~~~C~~~~~ 399 (403)
T 3aup_A 381 GFSTSSLHSHGVKCADLFN 399 (403)
T ss_dssp EEESSCGGGGTCCGGGSCC
T ss_pred EEecccccccCCCcccccc
Confidence 99 7788876543
No 3
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.2e-52 Score=409.00 Aligned_cols=322 Identities=20% Similarity=0.430 Sum_probs=237.4
Q ss_pred EEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccCCC
Q 037706 4 VYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLLKS 83 (394)
Q Consensus 4 v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~~~ 83 (394)
|+|||||+++||+|. +| .+|+.++|.++.|....... +..|....+..
T Consensus 26 v~~DTGSs~lWv~c~----~~--------------------~~~~~~~C~s~~C~~~~~~~--~~sc~~~~~~~------ 73 (381)
T 1t6e_X 26 LVLDVAGPLVWSTCD----GG--------------------QPPAEIPCSSPTCLLANAYP--APGCPAPSCGS------ 73 (381)
T ss_dssp EEEETTCCCEEECCC----TT--------------------CCCCCCBTTSHHHHHHHSSC--CTTCCCCCC--------
T ss_pred EEEECCCCceEEeCC----CC--------------------CCCCccCCCCchhccccCCC--CCCCCCccCCc------
Confidence 899999999999998 33 13567788888887654321 11232111000
Q ss_pred CC-CCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCc----EEEecccCC--C---CCcceEeecCCCCCChh
Q 037706 84 TC-CRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPK----FCFGCVGST--Y---REPIGIAGFGRGALSVP 153 (394)
Q Consensus 84 ~~-~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~----~~fg~~~~~--~---~~~dGIlGLg~~~~S~~ 153 (394)
.| +..|..|.++|++|+.++|++++|+|+|++.++. ..+++ +.|||+..+ . ...|||||||+..+|++
T Consensus 74 ~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~--~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlGLg~~~~s~~ 151 (381)
T 1t6e_X 74 DKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGS--KPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALP 151 (381)
T ss_dssp ----CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSS--SEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSSTTSHH
T ss_pred CcCCCccccccccccCCceeeEEEEEEEEEeeccCCC--ccccceeeeeEeecCcccccCCCCCCCceEEEeCCCcchhH
Confidence 00 3456239999999998779999999999863321 23444 367999865 2 35899999999999999
Q ss_pred hhhcc---CCCceEEeccCccCCCCCCCCccEEEcccCcC---CCCCceeecCccCCCCCCceEEEeeEEEECCEEeeee
Q 037706 154 SQLGF---LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS---SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEV 227 (394)
Q Consensus 154 ~ql~~---~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~---~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~~~~~ 227 (394)
.||.. .+++||+||.+. ..|+|+||+++.. +.+++.|+|++.++..+ +|.|.|++|+|+++ .+.+
T Consensus 152 ~ql~~~~~~~~~FS~~L~~~-------~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~-~y~v~l~~i~vg~~-~~~~ 222 (381)
T 1t6e_X 152 AQVASAQKVANRFLLCLPTG-------GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSP-AHYISARSIVVGDT-RVPV 222 (381)
T ss_dssp HHHHHHHTCCSEEEEECCSS-------SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCC-SCEECEEEEEETTE-ECCC
T ss_pred HHHhhhcccCceEEEEeCCC-------CCeeEEeCCcccccccccCcceeeccccCCCCc-ceEEEEEEEEEcCE-EecC
Confidence 99975 579999999862 5799999998763 47899999998764433 56799999999999 8876
Q ss_pred cCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhc-------cCCCCcccccccCCCCccCCCCCCCCCCCC
Q 037706 228 PLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTIT-------YYPRAKEVEERTGFDLCYRVPCPNNTFTDD 300 (394)
Q Consensus 228 ~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~-------~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 300 (394)
+...+. ++++||||||++++||+++|++|+++|.+++. .+.+.. +....+..||..++...+....
T Consensus 223 ~~~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~C~~~~~~~~~~~~~ 295 (381)
T 1t6e_X 223 PEGALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAV--EAVAPFGVCYDTKTLGNNLGGY 295 (381)
T ss_dssp CTTCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEE--CCCTTCSCEEEGGGCCEETTEE
T ss_pred CHHHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccC--CCCCCCCccCCCCCCcccccCC
Confidence 654332 35799999999999999999999999988764 122210 1123467899874321111124
Q ss_pred CCCeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEEEEEeCCCC----CCCCceeecccceeeeEEEEeCCCCEEEEe
Q 037706 301 LFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDG----DYGPSGVFGSFQQQNVEVVYDLEKERIGFQ 376 (394)
Q Consensus 301 ~~P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~~~~~~~~~----~~~~~~ILG~~fl~~~yvvfD~~~~riGfa 376 (394)
.+|+|+|+|+||+.|+|++++|+++.. .+..|++|+..... ...+.||||++|||++|+|||++|+|||||
T Consensus 296 ~~P~i~f~f~gg~~~~l~~~~y~~~~~-----~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA 370 (381)
T 1t6e_X 296 AVPNVQLGLDGGSDWTMTGKNSMVDVK-----QGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFS 370 (381)
T ss_dssp CCCCEEEEETTSCEEEECHHHHEEEEE-----TTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred cCCeEEEEECCCcEEEeCCCeEEEEcC-----CCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEe
Confidence 799999999767999999999999764 35789998876531 112579999999999999999999999999
Q ss_pred cCCC
Q 037706 377 PMDC 380 (394)
Q Consensus 377 ~~~c 380 (394)
++..
T Consensus 371 ~~~~ 374 (381)
T 1t6e_X 371 RLPH 374 (381)
T ss_dssp ECCT
T ss_pred cccC
Confidence 8664
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.5e-51 Score=395.55 Aligned_cols=289 Identities=27% Similarity=0.377 Sum_probs=225.6
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCC--CCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCM--DCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLST 79 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~--~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~ 79 (394)
|.|+|||||+++||+|. .|. .|.. ++.|+|++|+||+...|
T Consensus 38 ~~v~~DTGSs~lWv~~~----~C~~~~C~~------~~~y~~~~SsT~~~~~~--------------------------- 80 (351)
T 1tzs_A 38 FTVIFDTGSSNLWVPSV----YCTSPACKT------HSRFQPSQSSTYSQPGQ--------------------------- 80 (351)
T ss_dssp EEEEEETTCCCEEEEBT----TCCSGGGTT------SCCBCGGGCTTCBCCSC---------------------------
T ss_pred EEEEEeCCCcceEEecC----CCCccccCC------CCcCCcccCcceEECCC---------------------------
Confidence 78999999999999999 886 6764 68999999999986443
Q ss_pred cCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCC------CcceEeecCCCCCC--
Q 037706 80 LLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYR------EPIGIAGFGRGALS-- 151 (394)
Q Consensus 80 ~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~------~~dGIlGLg~~~~S-- 151 (394)
. |.+.|++|++ +|.+++|+|+|++ ++++++.|||+....+ ..+||||||+..++
T Consensus 81 ----------~-~~i~Yg~Gs~-~G~~~~D~v~ig~------~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 142 (351)
T 1tzs_A 81 ----------S-FSIQYGTGSL-SGIIGADQVSVEG------LTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVG 142 (351)
T ss_dssp ----------E-EEEESSSCEE-EEEEEEEEEEETT------EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGG
T ss_pred ----------E-EEEEeCCCCe-EEEEEEeEEEECC------eEECCeEEEEEEeccccccccCCCceEEecCCcccccc
Confidence 3 9999999985 5999999999998 7889999999987643 47999999998765
Q ss_pred ----hhhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCE
Q 037706 152 ----VPSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNS 222 (394)
Q Consensus 152 ----~~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~ 222 (394)
++.+|.. .+++||+||.+.. .....|.|+|||+|+. +.+++.|+|+.. +.+|.|.|++|.|+++
T Consensus 143 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~---~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~ 215 (351)
T 1tzs_A 143 GVTPVFDNMMAQNLVDLPMFSVYMSSNP---EGGAGSELIFGGYDHSHFSGSLNWVPVTK----QAYWQIALDNIQVGGT 215 (351)
T ss_dssp GCCCHHHHHHHTTCCSSSEEEEECCCCC-----CTTCEEEETSCCGGGBCSCCEEEECSE----ETTEEEEEEEEEETTE
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEEcCCC---CCCCCCEEEECCCCHHHcCCceEEEecCC----CceEEEEeCEEEECCc
Confidence 3344543 3689999998741 1124799999999987 589999999975 3589999999999998
Q ss_pred EeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCC
Q 037706 223 SLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLF 302 (394)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 302 (394)
.+... ....+||||||++++||+++|++|++++.+... . ......|+.. ..+
T Consensus 216 -~~~~~---------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~--------~-g~~~~~C~~~---------~~~ 267 (351)
T 1tzs_A 216 -VMFCS---------EGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV--------D-GEYAVECANL---------NVM 267 (351)
T ss_dssp -EEECT---------TCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC--------S-SSEEECGGGG---------GGS
T ss_pred -eEEcC---------CCceEEeccCCcceeCCHHHHHHHHHHhCCccc--------C-CeEEEeCCCC---------ccC
Confidence 65322 235799999999999999999999998854322 0 0112356643 468
Q ss_pred CeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCC-CCCCceeecccceeeeEEEEeCCCCEEEEecCCC
Q 037706 303 PSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDG-DYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMDC 380 (394)
Q Consensus 303 P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~-~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~c 380 (394)
|+|+|+| +|+.|+|++++|+++.... ....|+ +|+..+.. ...+.||||++|||++|+|||++++|||||+++|
T Consensus 268 P~i~f~f-~g~~~~i~~~~yi~~~~~~---~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~ 343 (351)
T 1tzs_A 268 PDVTFTI-NGVPYTLSPTAYTLLDFVD---GMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVP 343 (351)
T ss_dssp CCEEEEE-TTEEEEECTTTSEECC--------CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC-
T ss_pred CcEEEEE-CCEEEEECHHHhEeeccCC---CCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCc
Confidence 9999999 5799999999999865321 235899 68765421 1235799999999999999999999999999999
Q ss_pred cchh
Q 037706 381 ASTA 384 (394)
Q Consensus 381 ~~~~ 384 (394)
...+
T Consensus 344 ~s~~ 347 (351)
T 1tzs_A 344 WSHP 347 (351)
T ss_dssp ----
T ss_pred ccch
Confidence 8743
No 5
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2.4e-51 Score=400.62 Aligned_cols=285 Identities=22% Similarity=0.345 Sum_probs=225.4
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCC----CCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCM----DCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSL 77 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~----~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~ 77 (394)
|+|+|||||+++||+|. .|. .|.. ++.|+|++|+||+...|
T Consensus 76 f~vi~DTGSs~lWV~s~----~C~~~~~~C~~------~~~y~~~~SsT~~~~~~------------------------- 120 (383)
T 2x0b_A 76 FKVVFDTGSSNVWVPSS----KCSRLYTACVY------HKLFDASDSSSYKHNGT------------------------- 120 (383)
T ss_dssp EEEEEETTCCCEEEEBT----TSCTTSHHHHT------SCCBCGGGCTTCEEEEE-------------------------
T ss_pred EEEEEeCCCCCeEEecc----CCCCCcccccC------CCCCCCCCCCcEEECCc-------------------------
Confidence 79999999999999999 785 5864 68999999999987543
Q ss_pred cccCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCC------CCcceEeecCCCCCC
Q 037706 78 STLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTY------REPIGIAGFGRGALS 151 (394)
Q Consensus 78 ~~~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~------~~~dGIlGLg~~~~S 151 (394)
. |.++|++|++. |++++|+|+|++ ++++ +.|||++.+. ..+|||||||+..+|
T Consensus 121 ------------~-~~i~Yg~Gs~~-G~~~~Dtv~ig~------~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s 179 (383)
T 2x0b_A 121 ------------E-LTLRYSTGTVS-GFLSQDIITVGG------ITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQA 179 (383)
T ss_dssp ------------E-EEEECSSCEEE-EEEEEEEEEETT------EEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGC
T ss_pred ------------E-EEEEcCCccEE-EEEEeeEEEEcC------ceEE-EEEEEEEecCCcccccCCCceEeccCCCccc
Confidence 2 99999999954 999999999998 7888 9999998764 258999999998766
Q ss_pred h------hhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEEC
Q 037706 152 V------PSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIG 220 (394)
Q Consensus 152 ~------~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~ 220 (394)
+ ..+|.. .+++||+||.+.... ....+|.|+|||+|+. +.+++.|+|+.. +.+|.|.|++|.|+
T Consensus 180 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~-~~~~~G~l~fGg~d~~~y~G~l~~~pv~~----~~~w~v~l~~i~v~ 254 (383)
T 2x0b_A 180 IGRVTPIFDNIISQGVLKEDVFSFYYNRDSEN-SQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSVG 254 (383)
T ss_dssp GGGCCCHHHHHHTTTCCSSSEEEEEECCSCC-----CCEEEEESSCCGGGEEEEEEEEEBSS----TTSCEEEECEEEES
T ss_pred cCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCc-ccCCCcEEEECCcChHHcCCceEEEEcCC----CceEEEEEeEEEeC
Confidence 4 333433 368999999874100 0113899999999988 489999999975 35899999999999
Q ss_pred CEEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCC
Q 037706 221 NSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDD 300 (394)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 300 (394)
++ .+... ++..+||||||+++++|+++|++|.++|.+.. . .......|+.. .
T Consensus 255 ~~-~~~~~---------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-~--------~g~~~v~C~~~---------~ 306 (383)
T 2x0b_A 255 SS-TLLCE---------DGCLALVDTGASYISGSTSSIEKLMEALGAKK-R--------LFDYVVKCNEG---------P 306 (383)
T ss_dssp SC-CCBST---------TCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-C--------SSCEEEEGGGT---------T
T ss_pred Cc-eEEcC---------CCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-c--------CCcEEEecccc---------c
Confidence 98 64321 24679999999999999999999999885432 0 00112356654 4
Q ss_pred CCCeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCC-CCCCceeecccceeeeEEEEeCCCCEEEEecC
Q 037706 301 LFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDG-DYGPSGVFGSFQQQNVEVVYDLEKERIGFQPM 378 (394)
Q Consensus 301 ~~P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~-~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~ 378 (394)
.+|+|+|+| +|+.|+|+|++|+++.... ....|+ +|+..+.. ..++.||||++|||++|+|||++|+|||||++
T Consensus 307 ~~P~i~f~~-~g~~~~l~~~~yi~~~~~~---~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a 382 (383)
T 2x0b_A 307 TLPDISFHL-GGKEYTLTSADYVFQESYS---SKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALA 382 (383)
T ss_dssp TCCCEEEEE-TTEEEEECHHHHBCCCCCC---TTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cCceEEEEE-CCEEEEECHHHhEeeccCC---CCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEc
Confidence 689999999 5799999999999865321 245899 78765422 12358999999999999999999999999986
Q ss_pred C
Q 037706 379 D 379 (394)
Q Consensus 379 ~ 379 (394)
+
T Consensus 383 ~ 383 (383)
T 2x0b_A 383 R 383 (383)
T ss_dssp C
T ss_pred C
Confidence 3
No 6
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=3.7e-51 Score=397.67 Aligned_cols=287 Identities=22% Similarity=0.315 Sum_probs=231.1
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCC---CCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCM---DCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLS 78 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~---~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~ 78 (394)
|.|+|||||+++||+|. .|. .|.. ++.|+|++|+|++...|
T Consensus 33 ~~v~~DTGSs~~Wv~~~----~C~~~~~C~~------~~~y~~~~SsT~~~~~~-------------------------- 76 (361)
T 1mpp_A 33 FYLLFDTGSSDTWVPHK----GCDNSEGCVG------KRFFDPSSSSTFKETDY-------------------------- 76 (361)
T ss_dssp EEEEEETTCCCCEEEBT----TCCGGGTCCS------SCCBCGGGCTTCEEEEE--------------------------
T ss_pred EEEEEcCCCCCeEECCC----CCCCCccCCC------CCcCCCccCCceEecCC--------------------------
Confidence 78999999999999999 898 7874 68999999999987543
Q ss_pred ccCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCC-----------CcceEeecCC
Q 037706 79 TLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYR-----------EPIGIAGFGR 147 (394)
Q Consensus 79 ~~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~-----------~~dGIlGLg~ 147 (394)
. |.+.|++|++ +|.+++|+|+|++ ++++++.|||+....+ ..+||||||+
T Consensus 77 -----------~-~~i~Yg~Gs~-~G~~~~D~v~~g~------~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~ 137 (361)
T 1mpp_A 77 -----------N-LNITYGTGGA-NGIYFRDSITVGG------ATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAY 137 (361)
T ss_dssp -----------E-EEEECSSCEE-EEEEEEEEEEETT------EEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSC
T ss_pred -----------e-EEEEECCceE-EEEEEEEEEEECC------EEEeceEEEEEEeccCccccccccccCCCCCEEEeCC
Confidence 2 9999999995 5999999999998 8899999999986532 4799999999
Q ss_pred CCCChh------------hhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCce
Q 037706 148 GALSVP------------SQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYY 210 (394)
Q Consensus 148 ~~~S~~------------~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y 210 (394)
..++.. .+|.. .+++||+||.+. ...|.|+|||+|+. +.+++.|+|++.....+.+|
T Consensus 138 ~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~------~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~ 211 (361)
T 1mpp_A 138 PDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN------DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFW 211 (361)
T ss_dssp GGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS------SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEE
T ss_pred cccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC------CCCcEEEEecCChhhcCCceEEEEcccCCCceeEE
Confidence 866543 34433 368999999873 35799999999987 48999999998654222389
Q ss_pred EEEeeEEEECCEEeeeecCcceeccCCCCCceE-EcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccC
Q 037706 211 YIGLEAITIGNSSLTEVPLSLREFDSQGNGGLL-VDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYR 289 (394)
Q Consensus 211 ~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~~i-iDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~ 289 (394)
.|.|++|.|+++ .+.+.. ...+| |||||++++||+++|++|+++|.+.... ........|+.
T Consensus 212 ~v~l~~i~v~~~-~~~~~~---------~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~~-------~~g~~~~~C~~ 274 (361)
T 1mpp_A 212 DAPVTGVKIDGS-DAVSFD---------GAQAFTIDTGTNFFIAPSSFAEKVVKAALPDATE-------SQQGYTVPCSK 274 (361)
T ss_dssp EEEEEEEEETTE-EEEEEE---------EEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCEE-------ETTEEEEEHHH
T ss_pred EEEEeEEEECCe-eeccCC---------CCEEEEECCCCCceeCCHHHHHHHHHHhCCcccC-------CCCcEEEECCC
Confidence 999999999998 664321 24699 9999999999999999999998654321 01011235664
Q ss_pred CCCCCCCCCCCCC-CeEEEEEe-C-----CeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCCCCCCceeecccceee
Q 037706 290 VPCPNNTFTDDLF-PSITFHFL-N-----NVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDGDYGPSGVFGSFQQQN 361 (394)
Q Consensus 290 ~~~~~~~~~~~~~-P~i~f~f~-g-----g~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~~~~~~~ILG~~fl~~ 361 (394)
. ..+ |+|+|+|. | |+.|+|++++|+++... ....|+ +|+... .+.||||++|||+
T Consensus 275 ~---------~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~----~~~~C~~~i~~~~----~~~~iLG~~fl~~ 337 (361)
T 1mpp_A 275 Y---------QDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDK----SGETCMFIVLPDG----GNQFIVGNLFLRF 337 (361)
T ss_dssp H---------TTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSS----SSCEEEESEEEES----SSCCEEEHHHHTT
T ss_pred c---------ccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCC----CCCeeEEEEEeCC----CCCEEEChHHhcc
Confidence 3 356 99999994 4 79999999999987532 245898 787652 2479999999999
Q ss_pred eEEEEeCCCCEEEEecCCCcch
Q 037706 362 VEVVYDLEKERIGFQPMDCAST 383 (394)
Q Consensus 362 ~yvvfD~~~~riGfa~~~c~~~ 383 (394)
+|+|||++++|||||+++|+..
T Consensus 338 ~yvvfD~~~~~igfa~~~~~~~ 359 (361)
T 1mpp_A 338 FVNVYDFGKNRIGFAPLASGYE 359 (361)
T ss_dssp EEEEEETTTTEEEEEEBCTTTC
T ss_pred EEEEEECCCCEEEEEEcccCCC
Confidence 9999999999999999999854
No 7
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.5e-50 Score=394.03 Aligned_cols=279 Identities=25% Similarity=0.390 Sum_probs=221.8
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCC--CCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMD--CDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLST 79 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~--C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~ 79 (394)
|.|+|||||+++||+|. .|.. |. .++.|+|++|+||+...|
T Consensus 71 ~~v~~DTGSs~lWV~s~----~C~~~~C~------~~~~y~~~~SsT~~~~~~--------------------------- 113 (370)
T 3psg_A 71 FTVIFDTGSSNLWVPSV----YCSSLACS------DHNQFNPDDSSTFEATSQ--------------------------- 113 (370)
T ss_dssp EEEEEETTCCCEEEEBT----TCCSGGGT------TSCCBCGGGCTTCEEEEE---------------------------
T ss_pred EEEEEeCCCCccEEECC----CCCCcccC------CCCCCCCccCcCcEECCc---------------------------
Confidence 78999999999999998 7864 54 378999999999987543
Q ss_pred cCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCC------CcceEeecCCCCCCh-
Q 037706 80 LLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYR------EPIGIAGFGRGALSV- 152 (394)
Q Consensus 80 ~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~------~~dGIlGLg~~~~S~- 152 (394)
. |.++|++|++ +|.+++|+|+|++ +++.++.|||+....+ ..|||||||++.++.
T Consensus 114 ----------~-~~i~Yg~Gs~-~G~~~~Dtv~ig~------~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~ 175 (370)
T 3psg_A 114 ----------E-LSITYGTGSM-TGILGYDTVQVGG------ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISAS 175 (370)
T ss_dssp ----------E-EEEESSSCEE-EEEEEEEEEEETT------EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGG
T ss_pred ----------E-EEEEeCCceE-EEEEEEEEEeeCC------cccCCeEEEEEEeecccccccCCccceeccCCcccccc
Confidence 2 9999999995 5999999999998 8999999999987654 379999999987653
Q ss_pred -----hhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCE
Q 037706 153 -----PSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNS 222 (394)
Q Consensus 153 -----~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~ 222 (394)
..+|.. .+++||+||.+. ...+|.|+|||+|+. +.+++.|+|+... .+|.|.|++|.|+++
T Consensus 176 ~~~~~~~~l~~qg~i~~~~FS~~L~~~-----~~~~G~l~fGg~D~~~y~g~l~~~pv~~~----~~w~v~l~~i~v~g~ 246 (370)
T 3psg_A 176 GATPVFDNLWDQGLVSQDLFSVYLSSN-----DDSGSVVLLGGIDSSYYTGSLNWVPVSVE----GYWQITLDSITMDGE 246 (370)
T ss_dssp GCCCHHHHHHHTTCSSSSEEEEEEC----------CEEEEETCCCGGGBSSCCEEEECSEE----TTEEEEECEEESSSS
T ss_pred CCCCHHHHHHHCCCCCCCEEEEEEccC-----CCCCeEEEEEeeChHhcCCcceeeccccc----ceeEEEEeEEEECCE
Confidence 334433 368999999974 245899999999998 5899999999753 589999999999998
Q ss_pred EeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCC
Q 037706 223 SLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLF 302 (394)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 302 (394)
.+... ++..+||||||++++||++++++|.++|.+... . ..+|..+|.. ...+
T Consensus 247 -~~~~~---------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~--------~-----~g~~~v~C~~----~~~l 299 (370)
T 3psg_A 247 -TIACS---------GGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN--------S-----DGEMVISCSS----IDSL 299 (370)
T ss_dssp -EEECT---------TCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC--------T-----TCCEECCGGG----GGGC
T ss_pred -EEecC---------CCceEEEcCCCCcEECCHHHHHHHHHHhCCccc--------C-----CCcEEEECCC----cccC
Confidence 66532 245799999999999999999999988754321 0 1223444421 2468
Q ss_pred CeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCC-CCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 037706 303 PSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDG-DYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMD 379 (394)
Q Consensus 303 P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~-~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~ 379 (394)
|+|+|+| ||+.|+|++++|+++ . ...|+ +|+..+.. ..++.||||++|||++|+|||++|+|||||+++
T Consensus 300 P~i~f~~-~g~~~~l~~~~yi~~-~------~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 300 PDIVFTI-DGVQYPLSPSAYILQ-D------DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp CCEEEEE-TTEEEEECHHHHEEE-C------SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CcEEEEE-CCEEEEECHHHhccc-C------CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 9999999 579999999999987 2 13599 67654322 123479999999999999999999999999864
No 8
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=2.9e-50 Score=386.50 Aligned_cols=281 Identities=19% Similarity=0.267 Sum_probs=222.0
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL 81 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~ 81 (394)
|.|+|||||+++||+|. .|..|..+ .++.|+|++|+|++.+.|
T Consensus 30 ~~v~~DTGSs~lWv~~~----~C~~~~~~----~~~~y~~~~SsT~~~~~~----------------------------- 72 (329)
T 3c9x_A 30 LPLDFDTGSSDLWVFSS----ETPKSSAT----GHAIYTPSKSSTSKKVSG----------------------------- 72 (329)
T ss_dssp EEEEEETTCCCEEECBT----TSCHHHHT----TSCCBCGGGCTTCEECTT-----------------------------
T ss_pred EEEEEcCCCCCeEEecC----CCCccccC----CCCcCCcccCcCceEcCC-----------------------------
Confidence 78999999999999999 89877532 478999999999987542
Q ss_pred CCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCC------CCcceEeecCCCCCCh---
Q 037706 82 KSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTY------REPIGIAGFGRGALSV--- 152 (394)
Q Consensus 82 ~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~------~~~dGIlGLg~~~~S~--- 152 (394)
|. |.++|++|+.++|.+++|+|+|++ ++++++.|||+.... ...+||||||+..++.
T Consensus 73 -------~~-~~i~Yg~Gs~~~G~~~~D~v~ig~------~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 138 (329)
T 3c9x_A 73 -------AS-WSISYGDGSSSSGDVYTDKVTIGG------FSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRP 138 (329)
T ss_dssp -------CB-EEEECTTSCEEEEEEEEEEEEETT------EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBS
T ss_pred -------Ce-EEEEeCCCCcEEEEEEEEEEEECC------EEEcceEEEEEEecCccccccCCCceeEEeCcccccccCC
Confidence 22 999999999777999999999998 789999999998653 3579999999976553
Q ss_pred ------hhhhcc--CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCEE
Q 037706 153 ------PSQLGF--LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSS 223 (394)
Q Consensus 153 ------~~ql~~--~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~ 223 (394)
..+|.. .+++||+||.+ ...|.|+|||+|+. +.+++.|+|++.. +.+|.|.|++|+|+++
T Consensus 139 ~~~~~~~~~l~~~i~~~~FS~~l~~-------~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~- 207 (329)
T 3c9x_A 139 HPQKTWFSNAASSLAEPLFTADLRH-------GQNGSYNFGYIDTSVAKGPVAYTPVDNS---QGFWEFTASGYSVGGG- 207 (329)
T ss_dssp SCCCCHHHHHHTTSSSSEEEEECCS-------SSCEEEEESSCCGGGCSSCEEEEECBCT---TSSCEEEECCEEETTC-
T ss_pred CCCCCHHHHHHHhcCCCEEEEEecC-------CCCcEEEEeCcChhhcccceEEEEccCC---CceEEEEEeeEEECCE-
Confidence 334433 35899999986 25799999999987 5899999999743 3589999999999998
Q ss_pred eeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCCC
Q 037706 224 LTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFP 303 (394)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P 303 (394)
.+.. ....+||||||++++||+++|++|.++|..+... . .. + -|..+|. ..+|
T Consensus 208 ~~~~----------~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~~--~-----~~-~---~~~~~C~------~~~P 260 (329)
T 3c9x_A 208 KLNR----------NSIDGIADTGTTLLLLDDNVVDAYYANVQSAQYD--N-----QQ-E---GVVFDCD------EDLP 260 (329)
T ss_dssp CCCS----------CCEEEEECTTCCSEEECHHHHHHHHTTCTTCEEE--T-----TT-T---EEEEETT------CCCC
T ss_pred eccC----------CCceEEEECCCCcEeCCHHHHHHHHHhCCCcEEc--C-----CC-C---EEEEECC------CCCC
Confidence 6531 1357999999999999999999988876432210 0 00 1 1222331 3579
Q ss_pred eEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEEE-EEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecC
Q 037706 304 SITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLL-FQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPM 378 (394)
Q Consensus 304 ~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~~-~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~ 378 (394)
+|+|+|. |+.++|++++|++..... ....|++ ++.... .+.||||++|||++|+|||++++|||||+.
T Consensus 261 ~i~f~f~-g~~~~ip~~~~~~~~~~~---~~~~C~~~i~~~~~---~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 261 SFSFGVG-SSTITIPGDLLNLTPLEE---GSSTCFGGLQSSSG---IGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp CEEEEET-TEEEEECGGGGEEEESST---TCSEEEESEEECTT---TTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred cEEEEEC-CEEEEECHHHeeeeccCC---CCCeEEEEEEcCCC---CCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 9999995 799999999999875321 2368995 665532 247999999999999999999999999974
No 9
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=9.8e-51 Score=388.86 Aligned_cols=275 Identities=22% Similarity=0.282 Sum_probs=221.8
Q ss_pred EEEEEEcCCcceeEcCCCCCCCC--CCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDC--MDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLST 79 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C--~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~ 79 (394)
|.|+|||||+++||+|. .| ..|.. ++.|+|++|+|++...|
T Consensus 29 ~~v~~DTGSs~~Wv~~~----~C~~~~C~~------~~~y~~~~SsT~~~~~~--------------------------- 71 (323)
T 3cms_A 29 FTVLFDTGSSDFWVPSI----YCKSNACKN------HQRFDPRKSSTFQNLGK--------------------------- 71 (323)
T ss_dssp EEEEEETTCCCEEEEBT----TCCSHHHHT------SCCBCGGGCTTCEEEEE---------------------------
T ss_pred EEEEEeCCccceEEcCC----CCCcccccC------CCCCCCccCCCeEECCc---------------------------
Confidence 78999999999999999 78 46864 68999999999987543
Q ss_pred cCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCC------CcceEeecCCCCCC--
Q 037706 80 LLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYR------EPIGIAGFGRGALS-- 151 (394)
Q Consensus 80 ~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~------~~dGIlGLg~~~~S-- 151 (394)
. |.++|++|++ +|.+++|+|+|++ ++++++.|||+....+ ..+||||||++.++
T Consensus 72 ----------~-~~i~Yg~Gs~-~G~~~~D~v~ig~------~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 133 (323)
T 3cms_A 72 ----------P-LSIHYGTGSM-QGILGYDTVTVSN------IVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASE 133 (323)
T ss_dssp ----------E-EEEEETTEEE-EEEEEEEEEEETT------EEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCT
T ss_pred ----------E-EEEEeCCCCe-EEEEEEEEEEECC------eEEeccEEEEEEecccccccccCCceEEecCcchhhcc
Confidence 2 9999999985 5999999999998 7889999999987643 57999999998655
Q ss_pred ----hhhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCE
Q 037706 152 ----VPSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNS 222 (394)
Q Consensus 152 ----~~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~ 222 (394)
++.+|.. .+++||+||.+. . ..|.|+|||+|+. +.+++.|+|+.. +.+|.|.|++|+|+++
T Consensus 134 ~~~~~~~~l~~q~~i~~~~FS~~l~~~-----~-~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~ 203 (323)
T 3cms_A 134 YSIPVFDNMMNRHLVAQDLFSVYMDRN-----G-QESMLTLGAIDPSYYTGSLHWVPVTV----QQYWQFTVDSVTISGV 203 (323)
T ss_dssp TCCCHHHHHHHTTCSSSSEEEEECCTT-----S-SCEEEEESCCCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTE
T ss_pred CCCCHHHHHHHCCCCCCCEEEEEECCC-----C-CCEEEEECCCChhhccCceEEEECcc----CCeEEEEEeeEEECCE
Confidence 3344443 368999999874 1 2399999999987 478999999975 3589999999999998
Q ss_pred EeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCC
Q 037706 223 SLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLF 302 (394)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 302 (394)
.+.++. ...+||||||++++||+++|++|++++.+... ........|+.. ..+
T Consensus 204 -~~~~~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~--------~~g~~~~~C~~~---------~~~ 256 (323)
T 3cms_A 204 -VVACEG---------GCQAILDTGTSKLVGPSSDILNIQQAIGATQN--------QYGEFDIDCDNL---------SYM 256 (323)
T ss_dssp -EEESTT---------CEEEEECTTCCSEEECHHHHHHHHHHHTCEEE--------TTTEEEECTTCT---------TTS
T ss_pred -EeecCC---------CcEEEEecCCccEeCCHHHHHHHHHHhCCeec--------CCCcEEEECCCC---------ccC
Confidence 765432 35799999999999999999999998854321 000111245543 468
Q ss_pred CeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 037706 303 PSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMD 379 (394)
Q Consensus 303 P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~ 379 (394)
|+|+|+| +|+.++|++++|+++ . ...|+ +|+.... .+.||||++|||++|+|||++++|||||+++
T Consensus 257 P~i~f~f-~g~~~~i~~~~y~~~-~------~~~C~~~i~~~~~---~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 257 PTVVFEI-NGKMYPLTPSAYTSQ-D------QGFCTSGFQSENH---SQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp CCEEEEE-TTEEEEECHHHHEEE-E------TTEEEESEEEC------CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEE-CCEEEEECHHHhccC-C------CCEEEEEEEeCCC---CCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 9999999 579999999999987 2 35899 5776542 2479999999999999999999999999864
No 10
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=4.3e-50 Score=385.30 Aligned_cols=280 Identities=18% Similarity=0.270 Sum_probs=221.4
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL 81 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~ 81 (394)
|.|+|||||+++||+|. .|..|.. .++.|+|++|+|++.+.|
T Consensus 30 ~~v~~DTGSs~lWv~~~----~C~~~~~-----~~~~y~~~~SsT~~~~~~----------------------------- 71 (329)
T 1oew_A 30 LNLDFDTGSSDLWVFSS----ETTASEV-----XQTIYTPSKSTTAKLLSG----------------------------- 71 (329)
T ss_dssp EEEEEETTCCCEEECBT----TSCGGGC------CCCBCGGGCTTCEEEEE-----------------------------
T ss_pred EEEEECCCCCCeEEecC----CCCcccc-----ccCccCCccCccceecCC-----------------------------
Confidence 78999999999999999 8987752 268999999999997642
Q ss_pred CCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCC------CCcceEeecCCCCCCh---
Q 037706 82 KSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTY------REPIGIAGFGRGALSV--- 152 (394)
Q Consensus 82 ~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~------~~~dGIlGLg~~~~S~--- 152 (394)
|. |.++|++|+.++|.+++|+|+|++ ++++++.|||++... ...+||||||+..++.
T Consensus 72 -------~~-~~i~Yg~Gs~~~G~~~~D~v~~g~------~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 137 (329)
T 1oew_A 72 -------AT-WSISYGDGSSSSGDVYTDTVSVGG------LTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSP 137 (329)
T ss_dssp -------EE-EEEECTTSCEEEEEEEEEEEEETT------EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBS
T ss_pred -------Ce-EEEEeCCCCcEEEEEEEEEEEECC------EEEeeeEEEEEEecCccccccCCCceEEEeccccccccCc
Confidence 12 999999999777999999999998 789999999998753 3579999999976553
Q ss_pred ------hhhhcc--CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCEE
Q 037706 153 ------PSQLGF--LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSS 223 (394)
Q Consensus 153 ------~~ql~~--~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~ 223 (394)
..+|.. .+++||+||.+ ...|.|+|||+|+. +.+++.|+|++.+ +.+|.|.|++|+|+++
T Consensus 138 ~~~~~~~~~l~~~i~~~~FS~~L~~-------~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~- 206 (329)
T 1oew_A 138 TQQKTFFDNAKASLDSPVFTADLGY-------HAPGTYNFGFIDTTAYTGSITYTAVSTK---QGFWEWTSTGYAVGSG- 206 (329)
T ss_dssp SCCCCHHHHHTTTSSSSEEEEECCS-------SSCEEEEESCCCTTSSSSCCEEEECBCT---TSSCEEEEEEEEETTS-
T ss_pred CCCCCHHHHHHHhccCcEEEEEccC-------CCCeEEEEeccChHhcccceEEEEccCC---CceEEEEEeeEEECCe-
Confidence 344443 36899999986 25799999999987 4899999999743 3589999999999998
Q ss_pred eeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCCC
Q 037706 224 LTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFP 303 (394)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P 303 (394)
.+... ...+||||||++++||+++|++|+++|..+... . . ..-|..+|. ..+|
T Consensus 207 ~~~~~----------~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~~--~-----~----~g~~~~~C~------~~~P 259 (329)
T 1oew_A 207 TFKST----------SIDGIADTGTTLLYLPATVVSAYWAQVSGAKSS--S-----S----VGGYVFPCS------ATLP 259 (329)
T ss_dssp CCEEE----------EEEEEECTTCCSEEECHHHHHHHHTTSTTCEEE--T-----T----TTEEEEETT------CCCC
T ss_pred eccCC----------CceEEEeCCCCCEECCHHHHHHHHHhCCCcEEc--C-----C----CCEEEEECC------CCCC
Confidence 65311 246999999999999999999998876432210 0 0 011223331 3579
Q ss_pred eEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEEE-EEeCCCCCCCCceeecccceeeeEEEEeC-CCCEEEEecC
Q 037706 304 SITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLL-FQSMDDGDYGPSGVFGSFQQQNVEVVYDL-EKERIGFQPM 378 (394)
Q Consensus 304 ~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~~-~~~~~~~~~~~~~ILG~~fl~~~yvvfD~-~~~riGfa~~ 378 (394)
+|+|+| ||+.++|++++|++..... ....|++ ++.... .+.||||++|||++|+|||+ +++|||||++
T Consensus 260 ~i~f~f-gg~~~~ip~~~~~~~~~~~---~~~~C~~~i~~~~~---~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 260 SFTFGV-GSARIVIPGDYIDFGPIST---GSSSCFGGIQSSAG---IGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp CEEEEE-TTEEEEECHHHHEEEESST---TCSEEEESEEESTT---TSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred cEEEEE-CCEEEEECHHHeeeeecCC---CCCeEEEEEEeCCC---CCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 999999 6799999999999865321 2468995 665532 25799999999999999999 9999999974
No 11
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.2e-50 Score=388.14 Aligned_cols=283 Identities=24% Similarity=0.316 Sum_probs=224.9
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCc---ccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDD---YRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLS 78 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~---~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~ 78 (394)
|.|+|||||+++||+|... +|..|.. ...+..++.|+|++|+|++...|
T Consensus 27 ~~v~~DTGSs~~Wv~~~~~--~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~-------------------------- 78 (334)
T 1j71_A 27 QTVVIDTGSSDLWVVDTDA--ECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQ-------------------------- 78 (334)
T ss_dssp EEEEEETTCCCEEEEEEEE--EECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEE--------------------------
T ss_pred EEEEEcCCCCCEEEecCCC--CCcCcccccccccccCCCcCCcccCCCcccCCC--------------------------
Confidence 7899999999999986511 3543210 00122478999999999987553
Q ss_pred ccCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCCCcceEeecCCCCC--------
Q 037706 79 TLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYREPIGIAGFGRGAL-------- 150 (394)
Q Consensus 79 ~~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~~~dGIlGLg~~~~-------- 150 (394)
. |.++|++|+.++|.+++|+|+|++ ++++++.|||+.... ..+||||||+...
T Consensus 79 -----------~-~~i~Yg~Gs~~~G~~~~D~v~~g~------~~~~~~~fg~~~~~~-~~~GilGLg~~~~~~~~~~~~ 139 (334)
T 1j71_A 79 -----------D-FSIEYGDLTSSQGSFYKDTVGFGG------ISIKNQQFADVTTTS-VDQGIMGIGFTADEAGYNLYD 139 (334)
T ss_dssp -----------E-EEEEBTTSCEEEEEEEEEEEEETT------EEEEEEEEEEEEEES-SSSCEEECSCGGGSSTTCCCC
T ss_pred -----------c-eEEEECCCCEEEEEEEEEEEEECC------EEEccEEEEEEEecC-CCccEEEEcCCcccCccccCC
Confidence 2 999999999877999999999998 789999999998753 5899999999764
Q ss_pred Chhhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcCC-CCCceeecCccCCCCCCceEEEeeEEEECCEEee
Q 037706 151 SVPSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAISS-KDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLT 225 (394)
Q Consensus 151 S~~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~~-~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~~~ 225 (394)
+++.||.. .+++||+||.+. ....|.|+|||+|+.+ .+++.|+|++.+ .+|.|.|++|.|+++ .+
T Consensus 140 ~~~~~L~~qg~i~~~~Fs~~l~~~-----~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~-~~ 209 (334)
T 1j71_A 140 NVPVTLKKQGIINKNAYSLYLNSE-----DASTGKIIFGGVDNAKYTGTLTALPVTSS----VELRVHLGSINFDGT-SV 209 (334)
T ss_dssp CHHHHHHHTTSCSSSEEEEECCCT-----TCSEEEEEETEEETTSEEEEEEEEECCCS----SSCEEEEEEEEETTE-EE
T ss_pred cHHHHHHHCCCCCccEEEEEeCCC-----CCCCeEEEEeeechHHccCceEEEEccCC----CeEEEEEeEEEECCE-ec
Confidence 56777765 368999999873 2468999999999874 889999999753 389999999999998 76
Q ss_pred eecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccC-CCCCCCCCCCCCCCe
Q 037706 226 EVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYR-VPCPNNTFTDDLFPS 304 (394)
Q Consensus 226 ~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~-~~~~~~~~~~~~~P~ 304 (394)
..+ ..+||||||++++||+++|++|+++|.+.... . ...|. .+|. .+|+
T Consensus 210 ~~~-----------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~--------~----~~~~~~~~C~-------~~p~ 259 (334)
T 1j71_A 210 STN-----------ADVVLDSGTTITYFSQSTADKFARIVGATWDS--------R----NEIYRLPSCD-------LSGD 259 (334)
T ss_dssp EEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEET--------T----TTEEECSSSC-------CCSE
T ss_pred cCC-----------ccEEEeCCCCcEecCHHHHHHHHHHcCCcccC--------C----CceEEEEcCC-------CCCc
Confidence 542 35999999999999999999999998755420 0 01222 3331 2699
Q ss_pred EEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCCCcc
Q 037706 305 ITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMDCAS 382 (394)
Q Consensus 305 i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~c~~ 382 (394)
|+|+|.||+.++|++++|+++..+ +..|+ +++.. +.||||++|||++|+|||++++|||||+++|..
T Consensus 260 i~f~f~~g~~~~i~~~~y~~~~~~-----~~~C~~~i~~~------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 327 (334)
T 1j71_A 260 AVFNFDQGVKITVPLSELILKDSD-----SSICYFGISRN------DANILGDNFLRRAYIVYDLDDKTISLAQVKYTS 327 (334)
T ss_dssp EEEEESTTCEEEEEGGGGEEECSS-----SSCEEESEEEC------TTCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred eEEEEcCCcEEEECHHHheeecCC-----CCeeEEEEeEC------CCcEEChHhhccEEEEEECCCCEEEEEecCCCC
Confidence 999997789999999999987531 23599 55543 259999999999999999999999999999975
No 12
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=3.3e-50 Score=388.23 Aligned_cols=292 Identities=23% Similarity=0.384 Sum_probs=227.5
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCcc---cCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDY---RNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLS 78 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~---~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~ 78 (394)
|.|+|||||+++||+|... +|..|... ..+..++.|+|++|+|++...|
T Consensus 27 ~~v~~DTGSs~~Wv~~~~~--~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~-------------------------- 78 (342)
T 2qzx_A 27 LNVIVDTGSSDLWIPDSNV--ICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNT-------------------------- 78 (342)
T ss_dssp EEEEEETTCCCEEEEEEEE--EECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEE--------------------------
T ss_pred EEEEEeCCCCCeEEecCCC--CccCccccCccccccCCCcCCcccCCCcccCCC--------------------------
Confidence 7899999999999986410 35433110 0122478999999999987653
Q ss_pred ccCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCCCcceEeecCCCCC--------
Q 037706 79 TLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYREPIGIAGFGRGAL-------- 150 (394)
Q Consensus 79 ~~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~~~dGIlGLg~~~~-------- 150 (394)
. |.+.|++|+.++|.+++|+|+|++ ++++++.|||+.... ..+||||||+...
T Consensus 79 -----------~-~~i~Yg~Gs~~~G~~~~D~v~~g~------~~v~~~~fg~~~~~~-~~~GilGLg~~~~~~~~~~~~ 139 (342)
T 2qzx_A 79 -----------R-FDIKYGDGSYAKGKLYKDTVGIGG------VSVRDQLFANVWSTS-ARKGILGIGFQSGEATEFDYD 139 (342)
T ss_dssp -----------E-EEEECTTSCEEEEEEEEEEEEETT------EEEEEEEEEEEEEEC-SSSCEEECSCGGGCSSSSCCC
T ss_pred -----------c-EEEEeCCCCeEEEEEEEEEEEECC------EEecceEEEEEEecC-CCcCEEEEccccccCCCccCc
Confidence 2 999999999877999999999998 789999999998754 5899999999754
Q ss_pred Chhhhhcc---C-CCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCEEee
Q 037706 151 SVPSQLGF---L-QKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLT 225 (394)
Q Consensus 151 S~~~ql~~---~-~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~~~ 225 (394)
+++.||.. + +++||+||.+. ....|.|+|||+|+. +.+++.|+|++.+ .+|.|.|++|.|+++ .+
T Consensus 140 ~~~~~L~~qg~i~~~~Fs~~l~~~-----~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~-~~ 209 (342)
T 2qzx_A 140 NLPISLRNQGIIGKAAYSLYLNSA-----EASTGQIIFGGIDKAKYSGSLVDLPITSE----KKLTVGLRSVNVRGR-NV 209 (342)
T ss_dssp CHHHHHHHTTSSSSSEEEEECCCT-----TCSEEEEEETEEETTSBSSCCEEEECCCS----SSCEEEEEEEEETTE-EE
T ss_pred cHHHHHHHCCCcCccEEEEEeCCC-----CCCCeEEEECccchhhEecceEEEeccCC----ceEEEEEeEEEECCE-ec
Confidence 56677765 2 68999999863 245799999999987 4899999999753 379999999999998 76
Q ss_pred eecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCCCeE
Q 037706 226 EVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPSI 305 (394)
Q Consensus 226 ~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i 305 (394)
..+ ..+||||||++++||+++|++|+++|.+... +.+. ....|..+|. .+|+|
T Consensus 210 ~~~-----------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-~~~~--------~~~~~~~~C~-------~~p~i 262 (342)
T 2qzx_A 210 DAN-----------TNVLLDSGTTISYFTRSIVRNILYAIGAQMK-FDSA--------GNKVYVADCK-------TSGTI 262 (342)
T ss_dssp EEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE-ECTT--------SCEEEEECTT-------CCCEE
T ss_pred CCC-----------cCEEEeCCCCCEEcCHHHHHHHHHHhCCeee-eccC--------CCcEEEEECC-------CCCcE
Confidence 542 3599999999999999999999999876543 1110 0112333441 26999
Q ss_pred EEEEeCCeEEEecCCCeEEEecCCCCCCceEEEE-EEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCCCcch
Q 037706 306 TFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLL-FQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMDCAST 383 (394)
Q Consensus 306 ~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~~-~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 383 (394)
+|+|.||+.|+|++++|+++...........|+. ++.. +.||||++|||++|+|||++++|||||+++|...
T Consensus 263 ~f~f~~g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 335 (342)
T 2qzx_A 263 DFQFGNNLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES------EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSE 335 (342)
T ss_dssp EEEETTTEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC------SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC
T ss_pred EEEECCCcEEEEcHHHhcccccccCCCCCCccEEEEecC------CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCC
Confidence 9999768999999999998643110002457994 5443 2599999999999999999999999999999753
No 13
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=5.6e-50 Score=386.21 Aligned_cols=280 Identities=26% Similarity=0.383 Sum_probs=227.7
Q ss_pred EEEEEEcCCcceeEc-----CCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCC
Q 037706 2 IQVYMDTGSDLTWVP-----CGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCS 76 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~-----~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~ 76 (394)
|.|+|||||+++||+ |. .|..|.. ++.|+|++|+||+...|.
T Consensus 27 ~~v~~DTGSs~~Wv~~~~~~C~----~~~~C~~------~~~y~~~~SsT~~~~~~~----------------------- 73 (339)
T 3fv3_A 27 QTVIIDTGSSDFWVVDSNAQCG----KGVDCKS------SGTFTPSSSSSYKNLGAA----------------------- 73 (339)
T ss_dssp EEEEEETTCCCEEEEEEEEEEC----TTCCTTT------TCCBCGGGCTTCEEEEEE-----------------------
T ss_pred EEEEEeCCCCceEEecCCCCCC----CCCCCCC------CCcCCCccCcceeeCCce-----------------------
Confidence 789999999999998 65 5667864 689999999999976542
Q ss_pred CcccCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCCCcceEeecCCCCCC-----
Q 037706 77 LSTLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYREPIGIAGFGRGALS----- 151 (394)
Q Consensus 77 ~~~~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~~~dGIlGLg~~~~S----- 151 (394)
|.+.|++|+.++|.+++|+|+|++ ++++++.|||+....+ .+||||||+...+
T Consensus 74 ---------------~~i~Yg~gs~~~G~~~~D~v~~g~------~~v~~~~fg~~~~~~~-~~GilGLg~~~~~~~~~~ 131 (339)
T 3fv3_A 74 ---------------FTIRYGDGSTSQGTWGKDTVTING------VSITGQQIADVTQTSV-DQGILGIGYTSNEAVYDT 131 (339)
T ss_dssp ---------------EEEECTTSCEEEEEEEEEEEEETT------EEEEEEEEEEEEEESS-SSCEEECSCGGGCCCBCT
T ss_pred ---------------EEEEECCCceEEEEEEEEEEEECC------EEECceEEEEEEecCC-CceeEEecCccccccccc
Confidence 999999998778999999999998 8899999999987654 6999999987643
Q ss_pred -----------hhhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEee
Q 037706 152 -----------VPSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLE 215 (394)
Q Consensus 152 -----------~~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~ 215 (394)
++.||.. .+++||+||.+. ....|.|+|||+|+. +.+++.|+|+... .+|.|.++
T Consensus 132 ~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~-----~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~ 202 (339)
T 3fv3_A 132 SGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSP-----SAETGTIIFGGVDNAKYSGKLVAEQVTSS----QALTISLA 202 (339)
T ss_dssp TSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCT-----TCSEEEEEETEEETTSBSSCCEEEEBCCS----SSCEEEEE
T ss_pred cccccCccCCcHHHHHHHCCCCCCceEEEEECCC-----CCCCeEEEEeeechHHeecceEEEecccC----ccEEEEEE
Confidence 5666654 358999999874 245899999999988 4899999999753 38999999
Q ss_pred EEEECCEEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCC
Q 037706 216 AITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNN 295 (394)
Q Consensus 216 ~i~v~~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 295 (394)
+|.|+++ .+... ..+||||||++++||+++|++|.+++.+....... ........|+.
T Consensus 203 ~i~v~g~-~~~~~-----------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~----~~~~~~~~C~~------ 260 (339)
T 3fv3_A 203 SVNLKGS-SFSFG-----------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQVAR----DQYLYFIDCNT------ 260 (339)
T ss_dssp EEEESSC-EEEEE-----------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEET----TEEEEEECTTC------
T ss_pred EEEECCE-eecCC-----------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccc----cCceEEEecCC------
Confidence 9999998 76542 35999999999999999999999999754431000 00011124442
Q ss_pred CCCCCCCCeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCCCCCCceeecccceeeeEEEEeCCCCEEE
Q 037706 296 TFTDDLFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIG 374 (394)
Q Consensus 296 ~~~~~~~P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riG 374 (394)
..+|+|+|+|.+|+.++|++++|+++.. ...|+ +++.. +.||||++|||++|+|||++++|||
T Consensus 261 ----~~~p~i~f~f~~g~~~~v~~~~~~~~~~------~~~C~~~i~~~------~~~ilG~~fl~~~y~vfD~~~~~ig 324 (339)
T 3fv3_A 261 ----DTSGTTVFNFGNGAKITVPNTEYVYQNG------DGTCLWGIQPS------DDTILGDNFLRHAYLLYNLDANTIS 324 (339)
T ss_dssp ----CCCSEEEEEETTSCEEEEEGGGGEEECS------SSCEEESEEEC------SSCEECHHHHTTEEEEEETTTTEEE
T ss_pred ----CCCCcEEEEECCCCEEEECHHHheeeCC------CCeEEEEEEeC------CcEEeChHHHhCEEEEEECCCCEEE
Confidence 3479999999767999999999998752 34686 77762 3699999999999999999999999
Q ss_pred EecCCCcch
Q 037706 375 FQPMDCAST 383 (394)
Q Consensus 375 fa~~~c~~~ 383 (394)
||+++|++.
T Consensus 325 fA~~~~~~~ 333 (339)
T 3fv3_A 325 IAQVKYTTD 333 (339)
T ss_dssp EEEBCCCSC
T ss_pred EEecCCCCc
Confidence 999999853
No 14
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.9e-50 Score=388.62 Aligned_cols=293 Identities=26% Similarity=0.391 Sum_probs=226.2
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCc---ccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDD---YRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLS 78 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~---~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~ 78 (394)
|.|+|||||+++||+|.+. .|..|.. ...+..++.|+|++|+|++.+.|.
T Consensus 27 ~~v~~DTGSs~~Wv~~~~~--~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~------------------------- 79 (342)
T 3pvk_A 27 LNVIVDTGSSDLWVPDVNV--DCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTP------------------------- 79 (342)
T ss_dssp EEEEEETTCCCEEEEEEEE--EECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEE-------------------------
T ss_pred EEEEEECCCcceEEEcCCC--CCcccccccccCCCCCCCcCCCccCcceeecCCe-------------------------
Confidence 7899999999999986510 1533311 011223789999999999976532
Q ss_pred ccCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCCCcceEeecCCCC-------CC
Q 037706 79 TLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYREPIGIAGFGRGA-------LS 151 (394)
Q Consensus 79 ~~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~~~dGIlGLg~~~-------~S 151 (394)
|.+.|++|+.++|.+++|+|+|++ ++++++.|||++... ..+||||||+.. .+
T Consensus 80 -------------~~i~Yg~gs~~~G~~~~D~v~ig~------~~v~~~~fg~~~~~~-~~~GilGLg~~~~~~~~~~~~ 139 (342)
T 3pvk_A 80 -------------FKIGYGDGSSSQGTLYKDTVGFGG------VSIKNQVLADVDSTS-IDQGILGVGYKTNEAGGSYDN 139 (342)
T ss_dssp -------------EEEECSSSCEEEEEEEEEEEEETT------EEEEEEEEEEEEEES-SSSCEEECSCGGGCSSCSSCC
T ss_pred -------------EEEEecCCCeEEEEEEEEEEEECC------EEecceEEEEEEccC-CCccEEEecCccccccccCCc
Confidence 999999999777999999999998 889999999998754 589999999986 35
Q ss_pred hhhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCEEeee
Q 037706 152 VPSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTE 226 (394)
Q Consensus 152 ~~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~~~~ 226 (394)
++.||.. .+++||+||.+. ....|.|+|||+|+. +.+++.|+|+... .+|.|.|++|.|+++ .+.
T Consensus 140 ~~~~L~~qg~i~~~~fs~~l~~~-----~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~-~~~ 209 (342)
T 3pvk_A 140 VPVTLKKQGVIAKNAYSLYLNSP-----DAATGQIIFGGVDNAKYSGSLIALPVTSD----RELRISLGSVEVSGK-TIN 209 (342)
T ss_dssp HHHHHHHTTSSSSSEEEEECCCT-----TCSEEEEEETEEETTSBSSCCEEEECCCS----SSCEEEEEEEEETTE-EEE
T ss_pred HHHHHHhcCCCCCceEEEEeCCC-----CCCCcEEEECccCccceeeeeEEeecCcc----ceEEEEEeEEEECCE-Eec
Confidence 7777765 358999999874 245799999999988 4899999999753 379999999999999 775
Q ss_pred ecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCCCeEE
Q 037706 227 VPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPSIT 306 (394)
Q Consensus 227 ~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~ 306 (394)
.+ ...+||||||++++||+++|++|.++|.+.... .. .+ ..+|..+|. ..|+|+
T Consensus 210 ~~----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~-~~-------~~-~~~~~~~C~-------~~p~i~ 263 (342)
T 3pvk_A 210 TD----------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQ-DS-------NG-NSFYEVDCN-------LSGDVV 263 (342)
T ss_dssp EE----------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEE-CT-------TS-CEEEEECSC-------CCSEEE
T ss_pred CC----------CceEEEeCCCCCeecCHHHHHHHHHHcCCeecc-cC-------CC-ceEEEEecC-------CCCceE
Confidence 43 146999999999999999999999998655431 00 00 123444442 249999
Q ss_pred EEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCCCcch
Q 037706 307 FHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMDCAST 383 (394)
Q Consensus 307 f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 383 (394)
|+|.+|..++|++++|+++.....+.....|+ +++.. +.||||++|||++|+|||++++|||||+++|+..
T Consensus 264 f~f~~g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~------~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 335 (342)
T 3pvk_A 264 FNFSKNAKISVPASEFAASLQGDDGQPYDKCQLLFDVN------DANILGDNFLRSAYIVYDLDDNEISLAQVKYTSA 335 (342)
T ss_dssp EEESTTCEEEEEGGGGEEC----------CEEESEEEC------TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC
T ss_pred EEECCCCEEEEcHHHheeeccccCCCcCCeeEEEEeeC------CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCC
Confidence 99976799999999999864321110136798 55552 3699999999999999999999999999999853
No 15
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.2e-49 Score=382.18 Aligned_cols=281 Identities=25% Similarity=0.410 Sum_probs=223.9
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCC--CCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMD--CDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLST 79 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~--C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~ 79 (394)
|.|+|||||+++||+|. .|.. |.. ++.|+|++|+|++...|
T Consensus 28 ~~v~~DTGSs~lWv~~~----~C~~~~C~~------~~~y~~~~SsT~~~~~~--------------------------- 70 (329)
T 1dpj_A 28 FKVILDTGSSNLWVPSN----ECGSLACFL------HSKYDHEASSSYKANGT--------------------------- 70 (329)
T ss_dssp EEEEEETTCCCEEEEBT----TCCSHHHHT------SCCBCGGGCTTCEEEEE---------------------------
T ss_pred EEEEEeCCCcCeEEecC----CCCCcccCC------cCcCCcccCcCeEECCc---------------------------
Confidence 78999999999999999 8976 764 57999999999986432
Q ss_pred cCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCC------CCcceEeecCCCCCChh
Q 037706 80 LLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTY------REPIGIAGFGRGALSVP 153 (394)
Q Consensus 80 ~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~------~~~dGIlGLg~~~~S~~ 153 (394)
. |.+.|++|++ +|.+++|+|+|++ ++++++.|||++... ...+||||||+..+++.
T Consensus 71 ----------~-~~i~Yg~Gs~-~G~~~~D~v~ig~------~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~ 132 (329)
T 1dpj_A 71 ----------E-FAIQYGTGSL-EGYISQDTLSIGD------LTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVD 132 (329)
T ss_dssp ----------E-EEEEETTEEE-EEEEEEEEEEETT------EEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGG
T ss_pred ----------E-EEEEECCceE-EEEEEEEEEEECC------eEECCeEEEEEEecCccccccCCcceEEEeCCchhhcc
Confidence 2 9999999964 5999999999998 789999999998753 24799999999877643
Q ss_pred ------hhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCE
Q 037706 154 ------SQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNS 222 (394)
Q Consensus 154 ------~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~ 222 (394)
.+|.. .+++||+||.+... .....|.|+|||+|+. +.+++.|+|+.. +.+|.|.|++|+|+++
T Consensus 133 ~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~--~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~ 206 (329)
T 1dpj_A 133 KVVPPFYNAIQQDLLDEKRFAFYLGDTSK--DTENGGEATFGGIDESKFKGDITWLPVRR----KAYWEVKFEGIGLGDE 206 (329)
T ss_dssp GCCCHHHHHHHTTCCSSSEEEEEECCGGG--TCSSSEEEEESSCCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTE
T ss_pred CCCCHHHHHHhcCCcCCCEEEEEecCCCC--CCCCCcEEEEcCCChhhcCCceEEEEcCC----CceEEEEeeeEEECCe
Confidence 23332 25899999987421 1234799999999987 488999999974 3589999999999998
Q ss_pred EeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCC
Q 037706 223 SLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLF 302 (394)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 302 (394)
.+... ...+||||||++++||+++|++|++++.+... ...+|..+|.. ...+
T Consensus 207 -~~~~~----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-------------~~g~~~~~C~~----~~~~ 258 (329)
T 1dpj_A 207 -YAELE----------SHGAAIDTGTSLITLPSGLAEMINAEIGAKKG-------------WTGQYTLDCNT----RDNL 258 (329)
T ss_dssp -EEECS----------SCEEEECTTCSCEEECHHHHHHHHHHHTCEEC-------------TTSSEEECGGG----GGGC
T ss_pred -EecCC----------CccEEeeCCCCcEECCHHHHHHHHHHhCCccC-------------CCCeEEEECCC----CCcC
Confidence 66431 35799999999999999999999998854311 12344444421 2468
Q ss_pred CeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCC-CCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 037706 303 PSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDG-DYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMD 379 (394)
Q Consensus 303 P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~-~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~ 379 (394)
|+|+|+|+ |..|+|++++|+++.. ..|+ +|+..+.. ..++.||||++|||++|+|||++++|||||+++
T Consensus 259 P~i~f~f~-g~~~~i~~~~y~~~~~-------~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 259 PDLIFNFN-GYNFTIGPYDYTLEVS-------GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp CCEEEEET-TEEEEECTTTSEEEET-------TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEEC-CEEEEECHHHhEecCC-------CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 99999995 6999999999998752 4899 67765321 123589999999999999999999999999864
No 16
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=8.4e-50 Score=382.66 Aligned_cols=280 Identities=19% Similarity=0.259 Sum_probs=220.1
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL 81 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~ 81 (394)
|.|+|||||+++||+|. .|..|..+ .++.|+|++|+ ++.-
T Consensus 27 ~~v~~DTGSs~lWv~~~----~C~~~~c~----~~~~y~~~~Ss-~~~~------------------------------- 66 (325)
T 1ibq_A 27 LHLDFDTGSADLWVFSD----ELPSSEQT----GHDLYTPSSSA-TKLS------------------------------- 66 (325)
T ss_dssp EEEEEETTCCCEEEECT----TSCHHHHT----TSCCCBCCSSC-EECT-------------------------------
T ss_pred EEEEEeCCCccceEeeC----CCCccccC----CCCCCCchhcC-CccC-------------------------------
Confidence 78999999999999999 89876432 37899999998 4321
Q ss_pred CCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCC------CCcceEeecCCCCCC----
Q 037706 82 KSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTY------REPIGIAGFGRGALS---- 151 (394)
Q Consensus 82 ~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~------~~~dGIlGLg~~~~S---- 151 (394)
.|. |.++|++|+.++|.+++|+|+|++ ++++++.|||+.... ...+||||||+..++
T Consensus 67 ------~~~-~~i~Yg~Gs~~~G~~~~D~v~ig~------~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p 133 (325)
T 1ibq_A 67 ------GYS-WDISYGDGSSASGDVYRDTVTVGG------VTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQP 133 (325)
T ss_dssp ------TCB-EEEECSSSCEEEEEEEEEEEEETT------EEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBS
T ss_pred ------CCE-EEEEeCCCCEEEEEEEEeEEEECC------EEEcceEEEEEEecCccccccCCCceEEEeCcccccccCc
Confidence 133 999999999777999999999998 889999999998754 257999999997654
Q ss_pred -----hhhhhcc--CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCEE
Q 037706 152 -----VPSQLGF--LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSS 223 (394)
Q Consensus 152 -----~~~ql~~--~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~ 223 (394)
++.||.. .+++||+||.+. ..|.|+|||+|+. +.+++.|+|++.. +.+|.|.|++|+|+++
T Consensus 134 ~~~~~~~~~l~~~i~~~~FS~~l~~~-------~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~~- 202 (325)
T 1ibq_A 134 KAQTTFFDTVKSQLDSPLFAVQLKHD-------APGVYDFGYIDDSKYTGSITYTDADSS---QGYWGFSTDGYSIGDG- 202 (325)
T ss_dssp SCCCCHHHHHGGGSSSSEEEEEEETT-------EEEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEECEEEETTS-
T ss_pred CCCCCHHHHHHHhcCCcEEEEEecCC-------CCceEEECCcChhhccCceEEEEcCCC---CceEEEEECcEEECCe-
Confidence 3456554 368999999862 4799999999987 4899999999743 3589999999999998
Q ss_pred eeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCCC
Q 037706 224 LTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFP 303 (394)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P 303 (394)
.+.. ....+||||||++++||+++|++|+++|..+.. .. . . .-|..+|. ..+|
T Consensus 203 ~~~~----------~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~--~~-----~-~---g~~~~~C~------~~~P 255 (325)
T 1ibq_A 203 SSSS----------SGFSAIADTGTTLILLDDEIVSAYYEQVSGAQE--SY-----E-A---GGYVFSCS------TDLP 255 (325)
T ss_dssp CCBS----------CCEEEEECTTCCSEEECHHHHHHHHTTSTTCBC--CS-----S-S---SSCEEETT------CCCC
T ss_pred eccC----------CCceEEEeCCCCcEeCCHHHHHHHHHhCCCceE--cC-----c-C---CeEEEEcC------CCCC
Confidence 6531 135799999999999999999999987743221 00 0 0 11223442 3579
Q ss_pred eEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEEE-EEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 037706 304 SITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLL-FQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMD 379 (394)
Q Consensus 304 ~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~~-~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~ 379 (394)
+|+|+| ||+.++|++++|++..... ....|++ ++.... .+.||||++|||++|+|||++++|||||+++
T Consensus 256 ~i~f~f-gg~~~~i~~~~~~~~~~~~---~~~~C~~~i~~~~~---~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 256 DFTVVI-GDYKAVVPGKYINYAPVST---GSSTCYGGIQSNSG---LGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp CEEEEE-TTEEEEECHHHHEEEESST---TCSEEEESEEECTT---TCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cEEEEE-CCEEEEECHHHhcccccCC---CCCeEEEEEEcCCC---CCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 999999 6799999999999875321 2368995 665432 2479999999999999999999999999863
No 17
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=7.3e-50 Score=383.01 Aligned_cols=277 Identities=25% Similarity=0.403 Sum_probs=223.8
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCC--CCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCM--DCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLST 79 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~--~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~ 79 (394)
|.|+|||||+++||+|. .|. .|.. ++.|+|++|+|++...|
T Consensus 27 ~~v~~DTGSs~~Wv~~~----~C~~~~C~~------~~~y~~~~SsT~~~~~~--------------------------- 69 (324)
T 1am5_A 27 FKVIFDTGSSNLWVSSS----HCSAQACSN------HNKFKPRQSSTYVETGK--------------------------- 69 (324)
T ss_dssp EEEEEETTCCCEEECBT----TCCSHHHHT------SCCBCGGGCTTCEEEEE---------------------------
T ss_pred EEEEEeCCCcceEEecC----CCCcccccC------CCcCCCccCCCeEeCCc---------------------------
Confidence 78999999999999998 787 5764 68999999999987543
Q ss_pred cCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCC------CcceEeecCCCCCCh-
Q 037706 80 LLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYR------EPIGIAGFGRGALSV- 152 (394)
Q Consensus 80 ~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~------~~dGIlGLg~~~~S~- 152 (394)
. |.+.|++|+. +|.+++|+|+|++ ++++++.|||+....+ ..+||||||+..++.
T Consensus 70 ----------~-~~i~Yg~Gs~-~G~~~~D~v~~g~------~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 131 (324)
T 1am5_A 70 ----------T-VDLTYGTGGM-RGILGQDTVSVGG------GSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAA 131 (324)
T ss_dssp ----------E-EEEECSSCEE-EEEEEEEEEESSS------SCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGG
T ss_pred ----------E-EEEEECCCCe-EEEEEECceeECC------cEEcccEEEEEEecccccccCCCCceEEecCCcccccc
Confidence 2 9999999988 5999999999998 7888999999987532 479999999987654
Q ss_pred -----hhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCE
Q 037706 153 -----PSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNS 222 (394)
Q Consensus 153 -----~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~ 222 (394)
+.+|.. .+++||+||.+. ....|.|+|||+|+. +.+++.|+|+.. +.+|.|.|++|+|+++
T Consensus 132 ~~~~~~~~l~~qg~i~~~~FS~~l~~~-----~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~ 202 (324)
T 1am5_A 132 GAVPVFDNMGSQSLVEKDLFSFYLSGG-----GANGSEVMLGGVDNSHYTGSIHWIPVTA----EKYWQVALDGITVNGQ 202 (324)
T ss_dssp GCCCHHHHHHHTTCSSSSEEEEECCST-----TCSCEEEEESSCCGGGBCSCCEEEEEEE----ETTEEEEECEEEETTE
T ss_pred CCCchHHhHHhcCCCCCCEEEEEecCC-----CCCCcEEEECccCHHHcCCceEEEecCC----CcEEEEEEeEEEECCc
Confidence 344443 368999999874 235899999999987 489999999975 3489999999999998
Q ss_pred EeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCC
Q 037706 223 SLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLF 302 (394)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 302 (394)
.+... + ..+||||||++++||+++|++|.+++.+. .. .......|+.. ..+
T Consensus 203 -~~~~~---------~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~~--------~g~~~~~C~~~---------~~~ 253 (324)
T 1am5_A 203 -TAACE---------G-CQAIVDTGTSKIVAPVSALANIMKDIGAS-EN--------QGEMMGNCASV---------QSL 253 (324)
T ss_dssp -ECCCC---------C-EEEEECTTCSSEEECTTTHHHHHHHHTCE-EC--------CCCEECCTTSS---------SSS
T ss_pred -eeecc---------C-ceEEEecCCccEECCHHHHHHHHHHhCCc-cc--------CCcEEEeCCCc---------ccC
Confidence 64321 1 56999999999999999999999988654 20 00112345543 468
Q ss_pred CeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCC-CCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 037706 303 PSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDG-DYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMD 379 (394)
Q Consensus 303 P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~-~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~ 379 (394)
|+|+|+| +|+.|+|++++|+++. +..|+ +|+..+.. ...+.||||++|||++|+|||++++|||||+++
T Consensus 254 P~i~f~f-~g~~~~i~~~~y~~~~-------~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 254 PDITFTI-NGVKQPLPPSAYIEGD-------QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp CCEEEEE-TTEEEEECHHHHEEES-------SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred CcEEEEE-CCEEEEECHHHhcccC-------CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 9999999 5799999999999864 24799 77765421 123589999999999999999999999999864
No 18
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=5.8e-50 Score=384.51 Aligned_cols=281 Identities=28% Similarity=0.410 Sum_probs=224.6
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCC--CCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMD--CDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLST 79 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~--C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~ 79 (394)
|.|+|||||+++||+|. .|.. |.. ++.|+|++|+|++...|
T Consensus 27 ~~v~~DTGSs~lWv~~~----~C~~~~C~~------~~~y~~~~SsT~~~~~~--------------------------- 69 (329)
T 1htr_B 27 FLVLFDTGSSNLWVPSV----YCQSQACTS------HSRFNPSESSTYSTNGQ--------------------------- 69 (329)
T ss_dssp EEEEEETTCCCEEEEBT----TCCSHHHHT------SCCBCGGGCTTCEEEEE---------------------------
T ss_pred EEEEEcCCCccEEEecC----CCCCcccCC------CCcCCCccCCCeEECCc---------------------------
Confidence 78999999999999999 8874 764 68999999999987543
Q ss_pred cCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCC------CcceEeecCCCCCCh-
Q 037706 80 LLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYR------EPIGIAGFGRGALSV- 152 (394)
Q Consensus 80 ~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~------~~dGIlGLg~~~~S~- 152 (394)
. |.++|++|+. +|.+++|+|+|++ ++++++.|||+....+ ..+||||||+..++.
T Consensus 70 ----------~-~~i~Yg~gs~-~G~~~~D~v~~g~------~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 131 (329)
T 1htr_B 70 ----------T-FSLQYGSGSL-TGFFGYDTLTVQS------IQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVD 131 (329)
T ss_dssp ----------E-EEEEETTEEE-EEEEEEEEEEETT------EEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCT
T ss_pred ----------E-EEEEeCCCCe-EEEEEeeeEEEcc------eEECceEEEEEEEccccccccCCCceEEecCCCccccc
Confidence 2 9999999998 5999999999998 8899999999987643 479999999987653
Q ss_pred -----hhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCE
Q 037706 153 -----PSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNS 222 (394)
Q Consensus 153 -----~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~ 222 (394)
+.+|.. .+++||+||.+.. ....|.|+|||+|+. +.+++.|+|+.. +.+|.|.|++|+|+++
T Consensus 132 ~~~~~~~~l~~qg~i~~~~Fs~~L~~~~----~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~ 203 (329)
T 1htr_B 132 EATTAMQGMVQEGALTSPVFSVYLSNQQ----GSSGGAVVFGGVDSSLYTGQIYWAPVTQ----ELYWQIGIEEFLIGGQ 203 (329)
T ss_dssp TCCSHHHHHHHTTCSSSSEEEEEECSSC----SSEEEEEEESSCCGGGEEEEEEEEEBCS----SSSCEEEECEEEETTE
T ss_pred CCCCHHHHHHhcCCCCCCEEEEEEcCCC----CCCCcEEEEcccCHHHcCCceEEEECCC----CceEEEEEeEEEECCc
Confidence 344443 3689999998741 123799999999987 488999999975 3589999999999998
Q ss_pred EeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCC
Q 037706 223 SLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLF 302 (394)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 302 (394)
.+... .....+||||||++++||+++|++|++++.+.... .......|+.. ..+
T Consensus 204 -~~~~~--------~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~~--------~g~~~~~C~~~---------~~~ 257 (329)
T 1htr_B 204 -ASGWC--------SEGCQAIVDTGTSLLTVPQQYMSALLQATGAQEDE--------YGQFLVNCNSI---------QNL 257 (329)
T ss_dssp -ECCTT--------TTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEECT--------TSCEEECGGGG---------GGS
T ss_pred -eeeec--------CCCceEEEecCCccEECCHHHHHHHHHHhCCeecC--------CCeEEEeCCCc---------ccC
Confidence 65311 12357999999999999999999999988643320 00112356643 468
Q ss_pred CeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCC-CCCC-ceeecccceeeeEEEEeCCCCEEEEecCC
Q 037706 303 PSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDG-DYGP-SGVFGSFQQQNVEVVYDLEKERIGFQPMD 379 (394)
Q Consensus 303 P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~-~~~~-~~ILG~~fl~~~yvvfD~~~~riGfa~~~ 379 (394)
|+|+|+| +|++|+|++++|+++.. ..|+ +|+..+.. ..++ .||||++|||++|+|||++++|||||+++
T Consensus 258 P~i~f~f-~g~~~~i~~~~y~~~~~-------g~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 258 PSLTFII-NGVEFPLPPSSYILSNN-------GYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp CCEEEEE-TTEEEEECHHHHEEECS-------SCEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEE-CCEEEEECHHHhcccCC-------CEEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 9999999 57999999999998642 2899 67765321 1234 79999999999999999999999999864
No 19
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.2e-49 Score=381.45 Aligned_cols=277 Identities=19% Similarity=0.305 Sum_probs=221.5
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL 81 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~ 81 (394)
|.|+|||||+++||+|. .|..| . +.++.|+|++|+|++...|
T Consensus 30 ~~v~~DTGSs~lWv~~~----~c~~c-~----~~~~~y~~~~SsT~~~~~~----------------------------- 71 (325)
T 2apr_A 30 FNLDFDTGSSDLWIAST----LCTNC-G----SGQTKYDPNQSSTYQADGR----------------------------- 71 (325)
T ss_dssp EEEEEETTCCCCEEEBT----TCSSC-C----TTSCCBCGGGCTTCEEEEE-----------------------------
T ss_pred EEEEEcCCCCCEEEccC----CCchH-h----cCCCCCCcccCCCeeeCCC-----------------------------
Confidence 78999999999999999 78888 2 2478999999999986332
Q ss_pred CCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCC-----CcceEeecCCCCCC-----
Q 037706 82 KSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYR-----EPIGIAGFGRGALS----- 151 (394)
Q Consensus 82 ~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~-----~~dGIlGLg~~~~S----- 151 (394)
. |.++|++|+.++|.+++|+|+|++ ++++++.|||+....+ ..+||||||+..++
T Consensus 72 --------~-~~i~Yg~Gs~~~G~~~~D~v~~g~------~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~ 136 (325)
T 2apr_A 72 --------T-WSISYGDGSSASGILAKDNVNLGG------LLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGV 136 (325)
T ss_dssp --------E-EEEECTTSCEEEEEEEEEEEEETT------EEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTC
T ss_pred --------E-EEEEECCCCCEEEEEEEEEEEECC------EEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCC
Confidence 2 999999999777999999999998 7889999999986532 38999999997654
Q ss_pred --hhhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCEEe
Q 037706 152 --VPSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSL 224 (394)
Q Consensus 152 --~~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~~ 224 (394)
++.||.. .+++||+||.+.. ....|.|+|||+|+. +.+++.|+|+... +.+|.|.+++|+|++. .
T Consensus 137 ~~~~~~l~~qg~i~~~~FS~~l~~~~----~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~vg~~-~ 208 (325)
T 2apr_A 137 KTPMDNLISQGLISRPIFGVYLGKAK----NGGGGEYIFGGYDSTKFKGSLTTVPIDNS---RGWWGITVDRATVGTS-T 208 (325)
T ss_dssp CCHHHHHHHTTSCSSSEEEEEECCGG----GTCCEEEEETCCCGGGBCSCCEEEECBCT---TSSCEEEECEEEETTE-E
T ss_pred CCHHHHHHhcCCCCCceEEEEecCCC----CCCCCEEEEccCCchhccCceEEEEccCC---CCEEEEEEeEEEECCE-e
Confidence 4455543 2689999997631 235799999999987 5899999999743 3589999999999985 3
Q ss_pred eeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCCCe
Q 037706 225 TEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPS 304 (394)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~ 304 (394)
.. ....+||||||++++||+++|++|+++|.+.+... .-|..+|. ...+|+
T Consensus 209 ~~-----------~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~-------------g~~~~~C~-----~~~~p~ 259 (325)
T 2apr_A 209 VA-----------SSFDGILDTGTTLLILPNNIAASVARAYGASDNGD-------------GTYTISCD-----TSAFKP 259 (325)
T ss_dssp EE-----------CCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS-------------SCEEECSC-----GGGCCC
T ss_pred cC-----------CCceEEEecCCccEECCHHHHHHHHHHHhcccCCC-------------CeEEEECC-----CCCCCc
Confidence 21 13479999999999999999999999987655410 01223332 124899
Q ss_pred EEEEEeCCeEEEecCCCeEEEecCCCCCCceEEEE-EEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 037706 305 ITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLL-FQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMD 379 (394)
Q Consensus 305 i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~~-~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~ 379 (394)
|+|+|+| ..++||+++|+++.. ...|++ ++... .+.||||++|||++|+|||++|+|||||+.+
T Consensus 260 i~f~f~g-~~~~ip~~~~~~~~~------~~~C~~~i~~~~----~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 260 LVFSING-ASFQVSPDSLVFEEF------QGQCIAGFGYGN----WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp EEEEETT-EEEEECGGGGEEEEE------TTEEEESEEEES----SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEEECC-EEEEECHHHEEEcCC------CCeEEEEEEcCC----CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 9999965 699999999998653 358995 55443 2479999999999999999999999999864
No 20
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=9.4e-50 Score=383.04 Aligned_cols=280 Identities=14% Similarity=0.204 Sum_probs=222.4
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCC--CCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCM--DCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLST 79 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~--~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~ 79 (394)
|.|+|||||+++||+|. .|. .|.. ..++.|+|++| |++...|
T Consensus 30 ~~v~~DTGSs~lWv~~~----~C~~~~C~~----~~~~~y~~~~S-T~~~~~~--------------------------- 73 (330)
T 1yg9_A 30 FLTVFDSTSCNVVVASQ----ECVGGACVC----PNLQKYEKLKP-KYISDGN--------------------------- 73 (330)
T ss_dssp EEEEEETTCCCEEEECT----TCCSGGGGS----TTCCCCCCSSC-EEEEEEE---------------------------
T ss_pred EEEEEeCCCcceEEecC----CCCCccCcc----cccCccCCCCC-ceEECCC---------------------------
Confidence 78999999999999999 886 6831 13689999999 9986432
Q ss_pred cCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCC-----CCcceEeecCCCCCC---
Q 037706 80 LLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTY-----REPIGIAGFGRGALS--- 151 (394)
Q Consensus 80 ~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~-----~~~dGIlGLg~~~~S--- 151 (394)
. |.+.|++|+. +|.+++|+|+|++ ++++++.|||+.... ...+||||||+..++
T Consensus 74 ----------~-~~i~Yg~Gs~-~G~~~~Dtv~ig~------~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~ 135 (330)
T 1yg9_A 74 ----------V-QVKFFDTGSA-VGRGIEDSLTISQ------LTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNAL 135 (330)
T ss_dssp ----------E-EEEETTTEEE-EEEEEEEEEEETT------EEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTT
T ss_pred ----------E-EEEEECCceE-EEEEEEEEEEECC------EEEcCeEEEEEEEcccccccccCceEEEcCcchhcccc
Confidence 2 9999999998 6999999999998 789999999998763 147999999998776
Q ss_pred ----hhhhhcc---CCCceEEeccCccCCCCCCCCccEEEcccCcCC-CCCceeecCccCCCCCCceEEEeeEEEECCEE
Q 037706 152 ----VPSQLGF---LQKGFSHCFLAFKYANDPNISSPLVIGDVAISS-KDNLQFTPMLKSPMYPNYYYIGLEAITIGNSS 223 (394)
Q Consensus 152 ----~~~ql~~---~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~~-~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~ 223 (394)
++.+|.. ++++||+||.+.. +....|.|+|||+|+.+ .+++.|+|+.. +.+|.|.|++|.|+++
T Consensus 136 ~~~~~~~~l~~qg~i~~~FS~~l~~~~---~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~- 207 (330)
T 1yg9_A 136 KGKTVLENFVEENLIAPVFSIHHARFQ---DGEHFGEIIFGGSDWKYVDGEFTYVPLVG----DDSWKFRLDGVKIGDT- 207 (330)
T ss_dssp SCCCHHHHHHHTTSSCSEEEEEEEECT---TSCEEEEEEETSCCGGGEEEEEEEEEBSC----TTSCCEECSEEEETTE-
T ss_pred CCCCHHHHHHhcCCCCceEEEEEcCCC---CCCCCCEEEECCcCHHHccCceEEEECCC----CCEEEEEeCeEEECCE-
Confidence 4455543 4799999998741 12237999999999874 88999999973 3589999999999998
Q ss_pred eeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccC-CCCccCCCCCCCCCCCCCC
Q 037706 224 LTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTG-FDLCYRVPCPNNTFTDDLF 302 (394)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~-~~~C~~~~~~~~~~~~~~~ 302 (394)
.+. . .+..+||||||++++||+++|++|++++.+.... . ..... ...|+.. ..+
T Consensus 208 ~~~-~---------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~-----~-g~~~~~~~~C~~~---------~~~ 262 (330)
T 1yg9_A 208 TVA-P---------AGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVEK-----T-TTRRICKLDCSKI---------PSL 262 (330)
T ss_dssp EEE-C---------TTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEEE-----C-SSCEEEEECGGGG---------GGS
T ss_pred EEc-C---------CCcEEEEecCCccccCCHHHHHHHHHHhCCcccC-----C-CceEEEEEECCCc---------ccc
Confidence 653 1 1367999999999999999999999998543210 0 00000 1234432 468
Q ss_pred CeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 037706 303 PSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMD 379 (394)
Q Consensus 303 P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~ 379 (394)
|+|+|+| ||++++|++++|+++. ...|+ +|+.... ++.||||++|||++|+|||++|+|||||+++
T Consensus 263 p~i~f~f-gg~~~~l~~~~y~~~~-------~~~C~~~i~~~~~---~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 263 PDVTFVI-NGRNFNISSQYYIQQN-------GNLCYSGFQPCGH---SDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp CCEEEEE-TTEEEEECHHHHEEEE-------TTEEEESEEEETT---CSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEE-CCEEEEECHHHhcccC-------CCcEEEEEEeCCC---CCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 9999999 6799999999999875 24899 6765422 2479999999999999999999999999864
No 21
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=6.4e-50 Score=382.79 Aligned_cols=275 Identities=21% Similarity=0.271 Sum_probs=222.9
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCC--CCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCM--DCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLST 79 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~--~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~ 79 (394)
|.|+|||||+++||+|. .|. .|.. ++.|+|++|+|++...|.
T Consensus 26 ~~v~~DTGSs~~Wv~~~----~C~~~~C~~------~~~y~~~~SsT~~~~~~~-------------------------- 69 (320)
T 4aa9_A 26 FTVVFDTGSSDLWVPSI----YCKSNVCKN------HHRFDPRKSSTFRNLGKP-------------------------- 69 (320)
T ss_dssp EEEEEETTCCCEEEEBT----TCCSHHHHT------SCCBCGGGCTTCEEEEEE--------------------------
T ss_pred EEEEEeCCCCceEEcCC----CCCccccCC------CCCCCCCCCcCeEcCCcE--------------------------
Confidence 78999999999999999 787 4653 689999999999876532
Q ss_pred cCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCC------CcceEeecCCCCCC--
Q 037706 80 LLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYR------EPIGIAGFGRGALS-- 151 (394)
Q Consensus 80 ~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~------~~dGIlGLg~~~~S-- 151 (394)
|.+.|++|++ +|.+++|+|+|++ ++++++.|||+....+ ..+||||||+...+
T Consensus 70 ------------~~i~Yg~gs~-~G~~~~D~v~ig~------~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 130 (320)
T 4aa9_A 70 ------------LSIHYGTGSM-EGFLGYDTVTVSN------IVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASE 130 (320)
T ss_dssp ------------EEEEETTEEE-EEEEEEEEEEETT------EEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCT
T ss_pred ------------EEEEECCcEE-EEEEEEEEEEECC------EeecCeEEEEEEEcccccccccCcccEEecCccccccc
Confidence 9999999995 5999999999998 8899999999987653 37999999987644
Q ss_pred ----hhhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCE
Q 037706 152 ----VPSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNS 222 (394)
Q Consensus 152 ----~~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~ 222 (394)
+..+|.. .+++||+||.+. ...|.|+|||+|+. +.+++.|+|+.. +.+|.|.+++|.|+++
T Consensus 131 ~~~~~~~~l~~~g~i~~~~Fs~~l~~~------~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~ 200 (320)
T 4aa9_A 131 YSVPVFDNMMDRHLVARDLFSVYMDRN------GQGSMLTLGAIDPSYYTGSLHWVPVTL----QQYWQFTVDSVTINGV 200 (320)
T ss_dssp TCCCHHHHHHHTTCSSSSEEEEECCSS------SSCCEEEETCCCGGGEEEEEEEEECSS----BTTBEEEECEEEETTE
T ss_pred CCCCHHHHHHhCCCCCCceEEEEeCCC------CCCeEEEEcccCHHHccCceEEEEccc----CCceEEEEeEEEECCE
Confidence 4455543 368999999973 36899999999988 489999999964 3589999999999998
Q ss_pred EeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCC
Q 037706 223 SLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLF 302 (394)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 302 (394)
.+..+. ...+||||||++++||+++|++|.+++.+... ........|... ..+
T Consensus 201 -~~~~~~---------~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~--------~~g~~~~~C~~~---------~~~ 253 (320)
T 4aa9_A 201 -AVACVG---------GCQAILDTGTSVLFGPSSDILKIQMAIGATEN--------RYGEFDVNCGNL---------RSM 253 (320)
T ss_dssp -EEESTT---------CEEEEECTTCSSEEEEHHHHHHHHHHTTCEEC--------TTSCEEECGGGG---------GGC
T ss_pred -EeccCC---------CcEEEEECCCCcEECCHHHHHHHHHHhCCccc--------CCCcEEEeCCCC---------CcC
Confidence 765431 35799999999999999999999998754321 000111244433 468
Q ss_pred CeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 037706 303 PSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMD 379 (394)
Q Consensus 303 P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~ 379 (394)
|+|+|+| +|+.++|++++|+.+. ...|+ +++.... ++.||||++|||++|+|||++++|||||+++
T Consensus 254 p~i~f~f-~g~~~~l~~~~y~~~~-------~~~C~~~i~~~~~---~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 254 PTVVFEI-NGRDYPLSPSAYTSKD-------QGFCTSGFQGDNN---SELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp CCEEEEE-TTEEEEECHHHHEEEE-------TTEEEESEEEETT---CCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEE-CCEEEEECHHHhccCC-------CCeEEEEEEcCCC---CCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 9999999 5799999999999752 35899 5776432 2479999999999999999999999999864
No 22
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.7e-49 Score=378.78 Aligned_cols=276 Identities=16% Similarity=0.232 Sum_probs=217.2
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL 81 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~ 81 (394)
|.|+|||||+++||+|. .|..|.-+ .++.|+|++|+ ++...
T Consensus 28 ~~v~~DTGSs~lWv~~~----~C~~~~c~----~~~~y~~~~Ss-~~~~~------------------------------ 68 (323)
T 1izd_A 28 LGLDFDTGSADLWVFSS----QTPSSERS----GHDYYTPGSSA-QKIDG------------------------------ 68 (323)
T ss_dssp EEEEEETTCCCEEECBT----TSCHHHHT----TCCCBCCCTTC-EEEEE------------------------------
T ss_pred EEEEEcCCCcceEEecC----CCCccccc----CCCCCCccccC-CccCC------------------------------
Confidence 78999999999999999 89876422 37899999998 54211
Q ss_pred CCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCC------CCcceEeecCCCCCCh---
Q 037706 82 KSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTY------REPIGIAGFGRGALSV--- 152 (394)
Q Consensus 82 ~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~------~~~dGIlGLg~~~~S~--- 152 (394)
|. |.++|++|+.++|.+++|+|+|++ ++++++.|||++... ...+||||||+..++.
T Consensus 69 -------~~-~~i~Yg~Gs~~~G~~~~D~v~ig~------~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p 134 (323)
T 1izd_A 69 -------AT-WSISYGDGSSASGDVYKDKVTVGG------VSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQP 134 (323)
T ss_dssp -------EE-EEEECTTSCEEEEEEEEEEEEETT------EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBS
T ss_pred -------Ce-EEEEcCCCCeEEEEEEEEEEEECC------EEECceEEEEEEeccccccccCCCceEEecCcccccccCC
Confidence 23 999999999777999999999998 889999999998754 3579999999976553
Q ss_pred ------hhhhcc--CCCceEEeccCccCCCCCCCCccEEEcccCcCC-CCCceeecCccCCCCCCceEEEeeEEEECCEE
Q 037706 153 ------PSQLGF--LQKGFSHCFLAFKYANDPNISSPLVIGDVAISS-KDNLQFTPMLKSPMYPNYYYIGLEAITIGNSS 223 (394)
Q Consensus 153 ------~~ql~~--~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~~-~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~ 223 (394)
..+|.. .+++||+||.+. ..|.|+|||+|+.+ .+++.|+|++.. +.+|.|.+++|+|++.
T Consensus 135 ~~~~~~~~~l~~~i~~~~FS~~L~~~-------~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~~- 203 (323)
T 1izd_A 135 TPQKTFFDNVKSSLSEPIFAVALKHN-------APGVYDFGYTDSSKYTGSITYTDVDNS---QGFWGFTADGYSIGSD- 203 (323)
T ss_dssp SCCCCHHHHHGGGSSSSEEEEECCTT-------SCEEEEESSCCTTSEEEEEEEEECBCT---TSSCEEEESEEEETTE-
T ss_pred CCCCCHHHHHHHhccCcEEEEEccCC-------CCCEEEECCcCccccccceEEEECCCC---CceEEEEECeEEECCc-
Confidence 344443 358999999862 47999999999874 889999999743 3589999999999983
Q ss_pred eeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCCC
Q 037706 224 LTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFP 303 (394)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P 303 (394)
. . . ....+||||||++++||+++|++|.++|..+.. .. . ..-|..+|. ..+|
T Consensus 204 ~-~--~--------~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~--~~-----~----~g~~~~~C~------~~~P 255 (323)
T 1izd_A 204 S-S--S--------DSITGIADTGTTLLLLDDSIVDAYYEQVNGASY--DS-----S----QGGYVFPSS------ASLP 255 (323)
T ss_dssp E-E--C--------CCEEEEECTTCCSEEECHHHHHHHHTTSTTCEE--ET-----T----TTEEEEETT------CCCC
T ss_pred c-c--C--------CCceEEEeCCCcceeCCHHHHHHHHHhCCCcEE--cC-----c----CCEEEEECC------CCCc
Confidence 2 1 1 135799999999999999999999887742211 00 0 011233442 3579
Q ss_pred eEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEEE-EEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecC
Q 037706 304 SITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLL-FQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPM 378 (394)
Q Consensus 304 ~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~~-~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~ 378 (394)
+|+|+| ||++++|++++|++... ....|++ ++.... .+.||||++|||++|+|||++++|||||++
T Consensus 256 ~i~f~f-gg~~~~i~~~~~~~~~~-----~~~~C~~~i~~~~~---~~~~IlG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1izd_A 256 DFSVTI-GDYTATVPGEYISFADV-----GNGQTFGGIQSNSG---IGFSIFGDVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp CEEEEE-TTEEEEECHHHHEEEEC-----STTEEEESEEECTT---TSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred eEEEEE-CCEEEecCHHHeEEecC-----CCCeEEEEEEcCCC---CCcEEEChHHhcCEEEEEECCCCEEEEeeC
Confidence 999999 67999999999998753 2458995 766532 247999999999999999999999999985
No 23
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=6.4e-49 Score=384.96 Aligned_cols=305 Identities=20% Similarity=0.264 Sum_probs=225.7
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL 81 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~ 81 (394)
|.|+|||||+++||+|. +|..| ++.|+|++|+||+...|.
T Consensus 28 ~~v~~DTGSs~lWv~~~----~c~~~--------~~~f~~~~SsT~~~~~~~---------------------------- 67 (383)
T 2ewy_A 28 LQILVDTGSSNFAVAGT----PHSYI--------DTYFDTERSSTYRSKGFD---------------------------- 67 (383)
T ss_dssp EEEEEETTCCCEEEECS----CBTTB--------SCCCCGGGCTTCEEEEEE----------------------------
T ss_pred EEEEEecCCCceEEecC----CCCcc--------ccCcccccCccceeCCce----------------------------
Confidence 78999999999999998 77655 478999999999876532
Q ss_pred CCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCC------CCcceEeecCCCCCCh---
Q 037706 82 KSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTY------REPIGIAGFGRGALSV--- 152 (394)
Q Consensus 82 ~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~------~~~dGIlGLg~~~~S~--- 152 (394)
|.++|++|+. +|.+++|+|+|++.. ..-..+.|+++.+.. ...+||||||+..++.
T Consensus 68 ----------~~i~Yg~Gs~-~G~~~~Dtv~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~ 132 (383)
T 2ewy_A 68 ----------VTVKYTQGSW-TGFVGEDLVTIPKGF----NTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSS 132 (383)
T ss_dssp ----------EEEECSSCEE-EEEEEEEEEEETTTE----EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCT
T ss_pred ----------EEEEECCcEE-EEEEEEEEEEECCCc----cceeEEEEEEEEeecceeeccCcCceEEecCchhcccccc
Confidence 9999999997 599999999998631 111135678765432 2479999999976543
Q ss_pred -----hhhhcc---CCCceEEeccCccCC--CCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECC
Q 037706 153 -----PSQLGF---LQKGFSHCFLAFKYA--NDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGN 221 (394)
Q Consensus 153 -----~~ql~~---~~~~Fs~~l~~~~~~--~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~ 221 (394)
..+|.. ++++||+||.+..+. ......|.|+|||+|+. +.+++.|+|++.. .+|.|.|++|+|++
T Consensus 133 ~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g 208 (383)
T 2ewy_A 133 SLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE----WYYQIEILKLEIGG 208 (383)
T ss_dssp TSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB----TTBBCCEEEEEETT
T ss_pred cccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC----ceEEEEEEEEEECC
Confidence 223332 468999999752110 11246899999999987 5899999999753 48999999999999
Q ss_pred EEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCccccc-ccCCCCccCCCCCCCCCCCC
Q 037706 222 SSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEE-RTGFDLCYRVPCPNNTFTDD 300 (394)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~-~~~~~~C~~~~~~~~~~~~~ 300 (394)
+ .+.++...+ ....+||||||++++||+++|++|+++|.+... ..+.+. .. ......|+.... ....
T Consensus 209 ~-~~~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~-~~~~~~-~~~~~~~~~C~~~~~----~~~~ 276 (383)
T 2ewy_A 209 Q-SLNLDCREY-----NADKAIVDSGTTLLRLPQKVFDAVVEAVARASL-IPEFSD-GFWTGSQLACWTNSE----TPWS 276 (383)
T ss_dssp E-ECCCCTTTT-----TSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC-SSCCCH-HHHHTSEEEEECSSS----CGGG
T ss_pred E-Ecccccccc-----CCccEEEEcCCccccCCHHHHHHHHHHHhhhcc-cccCcc-ccccccccccccCCc----ccHh
Confidence 9 876653322 135799999999999999999999999987654 111110 00 012357886521 1124
Q ss_pred CCCeEEEEEeCC-----eEEEecCCCeEEEecCCCCCCceEEEEE--EeCCCCCCCCceeecccceeeeEEEEeCCCCEE
Q 037706 301 LFPSITFHFLNN-----VSLVLPQGNHFYAMSAPSNSSAVKCLLF--QSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERI 373 (394)
Q Consensus 301 ~~P~i~f~f~gg-----~~~~i~~~~y~~~~~~~~~~~~~~C~~~--~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~ri 373 (394)
.+|+|+|+|.|+ .+|+|+|++|+++..... .+..|+++ .... +.||||++|||++|+|||++++||
T Consensus 277 ~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~--~~~~C~~~~i~~~~-----~~~ILG~~fl~~~yvvfD~~~~rI 349 (383)
T 2ewy_A 277 YFPKISIYLRDENSSRSFRITILPQLYIQPMMGAG--LNYECYRFGISPST-----NALVIGATVMEGFYVIFDRAQKRV 349 (383)
T ss_dssp GSCCEEEEEECSSTTEEEEEEECHHHHEEEECCCT--TCSEEEEESEEEES-----SCEEECHHHHTTEEEEEETTTTEE
T ss_pred hCCcEEEEECCCCCCceEEEEEChHHheeecccCC--CCceeEEEEecCCC-----CcEEEChHHhCCeeEEEECCCCeE
Confidence 789999999864 489999999998764211 24589854 3321 369999999999999999999999
Q ss_pred EEecCCCcchh
Q 037706 374 GFQPMDCASTA 384 (394)
Q Consensus 374 Gfa~~~c~~~~ 384 (394)
|||+++|+...
T Consensus 350 GfA~~~c~~~~ 360 (383)
T 2ewy_A 350 GFAASPCAEIA 360 (383)
T ss_dssp EEEECTTCBSS
T ss_pred EEEeccCCCcC
Confidence 99999998643
No 24
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.6e-49 Score=378.87 Aligned_cols=277 Identities=19% Similarity=0.269 Sum_probs=217.1
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL 81 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~ 81 (394)
|.|+|||||+++||+|. .|..|..+ .++.|+|++|+ ++...
T Consensus 28 ~~v~~DTGSs~lWv~~~----~C~~~~c~----~~~~y~~~~Ss-~~~~~------------------------------ 68 (323)
T 1bxo_A 28 LNLNFDTGSADLWVFST----ELPASQQS----GHSVYNPSATG-KELSG------------------------------ 68 (323)
T ss_dssp EEEEEETTCCCEEECBT----TSCHHHHT----TSCCBCHHHHC-EEEEE------------------------------
T ss_pred EEEEEeCCCcceEEecC----CCCchhcc----CCCCCCcccCC-cccCC------------------------------
Confidence 78999999999999999 89876432 47899999988 54211
Q ss_pred CCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCC------CCcceEeecCCCCCCh---
Q 037706 82 KSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTY------REPIGIAGFGRGALSV--- 152 (394)
Q Consensus 82 ~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~------~~~dGIlGLg~~~~S~--- 152 (394)
|. |.++|++|+.++|.+++|+|+|++ ++++++.|||++... ...+||||||+..++.
T Consensus 69 -------~~-~~i~Yg~Gs~~~G~~~~D~v~ig~------~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 134 (323)
T 1bxo_A 69 -------YT-WSISYGDGSSASGNVFTDSVTVGG------VTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQP 134 (323)
T ss_dssp -------EE-EEEECTTSCEEEEEEEEEEEEETT------EEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBS
T ss_pred -------Ce-EEEEeCCCCeEEEEEEEEEEEECC------EEECcEEEEEEEecCcccccCCCCceEEEeCccccccccc
Confidence 23 999999999777999999999998 789999999998753 3579999999976543
Q ss_pred ------hhhhcc--CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCEE
Q 037706 153 ------PSQLGF--LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSS 223 (394)
Q Consensus 153 ------~~ql~~--~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~ 223 (394)
..+|.. .+++||+||.+. ..|.|+|||+|+. +.+++.|+|++.+ +.+|.|.|++|+|++.
T Consensus 135 ~~~~~~~~~l~~~i~~~~FS~~L~~~-------~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~~- 203 (323)
T 1bxo_A 135 QSQTTFFDTVKSSLAQPLFAVALKHQ-------QPGVYDFGFIDSSKYTGSLTYTGVDNS---QGFWSFNVDSYTAGSQ- 203 (323)
T ss_dssp SCCCCHHHHHGGGBSSSEEEEECCSS-------SCEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEEEEEEETTE-
T ss_pred CCCCCHHHHHHHhcCCcEEEEEEeCC-------CCceEEEeCcChhhccCceEEEECCCC---CCeEEEEEeeEEECCc-
Confidence 344443 358999999862 5799999999987 5899999999743 3589999999999982
Q ss_pred eeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCCC
Q 037706 224 LTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFP 303 (394)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P 303 (394)
. . ....+||||||++++||+++|++|+++|..+... . . . .-|..+|. ..+|
T Consensus 204 ~---~---------~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~~--~-----~-~---g~~~~~C~------~~~P 254 (323)
T 1bxo_A 204 S---G---------DGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQD--S-----N-A---GGYVFDCS------TNLP 254 (323)
T ss_dssp E---E---------EEEEEEECTTCSSEEECHHHHHHHHTTSTTCEEE--T-----T-T---TEEEECTT------CCCC
T ss_pred c---C---------CCceEEEeCCCCceeCCHHHHHHHHHhCCCceEc--C-----c-C---CEEEEECC------CCCc
Confidence 1 1 1246999999999999999999998877432210 0 0 0 11223342 3579
Q ss_pred eEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEEE-EEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 037706 304 SITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCLL-FQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMD 379 (394)
Q Consensus 304 ~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~~-~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~ 379 (394)
+|+|+| ||+.++|++++|++.... ....|++ ++.... .+.||||++|||++|+|||++|+|||||++.
T Consensus 255 ~i~f~f-gg~~~~l~~~~~~~~~~~----~~~~C~~~i~~~~~---~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 255 DFSVSI-SGYTATVPGSLINYGPSG----DGSTCLGGIQSNSG---IGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp CEEEEE-TTEEEEECHHHHEEEECS----SSSCEEESEEECTT---CSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred eEEEEE-CCEEEEECHHHeEEeccC----CCCeEEEEEECCCC---CCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 999999 679999999999987532 2358995 666532 2479999999999999999999999999863
No 25
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=2.5e-49 Score=381.97 Aligned_cols=285 Identities=23% Similarity=0.364 Sum_probs=223.9
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCC----CCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCM----DCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSL 77 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~----~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~ 77 (394)
|.|+|||||+++||+|. .|. .|.. ++.|+|++|+|++...|
T Consensus 33 ~~v~~DTGSs~~Wv~~~----~C~~~~~~C~~------~~~y~~~~SsT~~~~~~------------------------- 77 (341)
T 3k1w_A 33 FKVVFDTGSSNVWVPSS----KCSRLYTACVY------HKLFDASDSSSYKHNGT------------------------- 77 (341)
T ss_dssp EEEEEETTCCCEEEEBT----TSCTTCHHHHT------SCCBCGGGCTTCEEEEE-------------------------
T ss_pred EEEEEeCCCcceEEccC----CCCCCCCcccC------CCCCCCCcCcCeeECCC-------------------------
Confidence 78999999999999999 787 4653 68999999999986432
Q ss_pred cccCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCC------CcceEeecCCCCCC
Q 037706 78 STLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYR------EPIGIAGFGRGALS 151 (394)
Q Consensus 78 ~~~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~------~~dGIlGLg~~~~S 151 (394)
. |.+.|++|++ +|.+++|+|+|++ +++ ++.|||+....+ ..+||||||+...+
T Consensus 78 ------------~-~~i~Yg~gs~-~G~~~~D~v~ig~------~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 136 (341)
T 3k1w_A 78 ------------E-LTLRYSTGTV-SGFLSQDIITVGG------ITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQA 136 (341)
T ss_dssp ------------E-EEEEETTEEE-EEEEEEEEEEETT------EEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGC
T ss_pred ------------E-EEEEECCcEE-EEEEEEEEEEECC------cee-eEEEEEEEEccccccccCCcceEEECCchhhc
Confidence 2 9999999995 5999999999998 788 999999987542 37999999998765
Q ss_pred ------hhhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEEC
Q 037706 152 ------VPSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIG 220 (394)
Q Consensus 152 ------~~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~ 220 (394)
++.+|.. .+++||+||.+.... .....|.|+|||+|+. +.+++.|+|+.. +.+|.|.+++|.|+
T Consensus 137 ~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~-~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~ 211 (341)
T 3k1w_A 137 IGRVTPIFDNIISQGVLKEDVFSFYYNRDSEN-SQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSVG 211 (341)
T ss_dssp GGGCCCHHHHHHHHTCBSSSEEEEEECCCC------CCEEEEESSCCGGGEEEEEEEEECSS----TTSCEEEECCEEET
T ss_pred ccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCc-CCCCCCEEEECccChHHccCceEEEecCC----CCEEEEEEeEEEEC
Confidence 4445543 368999999974210 1134899999999988 489999999974 35899999999999
Q ss_pred CEEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCC
Q 037706 221 NSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDD 300 (394)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 300 (394)
+. .+..+. ...+||||||++++||+++|++|.+++.+... .. + |..+|.. ..
T Consensus 212 ~~-~~~~~~---------~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~--------~~--g----~~~~C~~----~~ 263 (341)
T 3k1w_A 212 SS-TLLCED---------GCLALVDTGASYISGSTSSIEKLMEALGAKKR--------LF--D----YVVKCNE----GP 263 (341)
T ss_dssp TE-EEECTT---------CEEEEECTTCSSEEECHHHHHHHHHHHTCEEC--------SS--C----EEEEGGG----GG
T ss_pred CE-EeecCC---------CCEEEEECCCChhcCCHHHHHHHHHHcCCeec--------CC--C----eEEeCCC----CC
Confidence 99 654322 35799999999999999999999998854322 00 1 3333311 24
Q ss_pred CCCeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCC-CCCCceeecccceeeeEEEEeCCCCEEEEecC
Q 037706 301 LFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDG-DYGPSGVFGSFQQQNVEVVYDLEKERIGFQPM 378 (394)
Q Consensus 301 ~~P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~-~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~ 378 (394)
.+|+|+|+|. |+.++|++++|+++.... ....|+ +++..+.. ...+.||||++|||++|+|||++++|||||++
T Consensus 264 ~~p~i~f~f~-g~~~~l~~~~~~~~~~~~---~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a 339 (341)
T 3k1w_A 264 TLPDISFHLG-GKEYTLTSADYVFQESYS---SKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALA 339 (341)
T ss_dssp GCCCEEEEET-TEEEEECHHHHBCCSCCC---TTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEEC-CEEEEECHHHheeEccCC---CCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEEC
Confidence 6899999995 799999999999865321 256899 67764321 12357999999999999999999999999997
Q ss_pred C
Q 037706 379 D 379 (394)
Q Consensus 379 ~ 379 (394)
+
T Consensus 340 ~ 340 (341)
T 3k1w_A 340 R 340 (341)
T ss_dssp C
T ss_pred C
Confidence 5
No 26
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1e-48 Score=381.74 Aligned_cols=276 Identities=22% Similarity=0.347 Sum_probs=221.8
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCC--CCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCM--DCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLST 79 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~--~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~ 79 (394)
|.|+|||||+++||+|. .|. .|.. ++.|+|++|+|++...|
T Consensus 77 ~~v~~DTGSs~lWv~~~----~C~~~~C~~------~~~y~~~~SsT~~~~~~--------------------------- 119 (375)
T 1miq_A 77 FMLIFDTGSANLWVPSK----KCNSSGCSI------KNLYDSSKSKSYEKDGT--------------------------- 119 (375)
T ss_dssp CCEEEETTCCCEEEEBT----TCCSSGGGG------SCCBCGGGCTTCEEEEE---------------------------
T ss_pred EEEEEeCCCcceEEccC----CCCcccccC------CCcCCCccCCceEECCc---------------------------
Confidence 68999999999999999 786 5764 68999999999987543
Q ss_pred cCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccC----CC----CCcceEeecCCCCCC
Q 037706 80 LLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGS----TY----REPIGIAGFGRGALS 151 (394)
Q Consensus 80 ~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~----~~----~~~dGIlGLg~~~~S 151 (394)
. |.++|++|++ +|.+++|+|+|++ +++++ .|||+.. +. ...+||||||++.++
T Consensus 120 ----------~-~~i~Yg~Gs~-~G~~~~Dtv~ig~------~~v~~-~Fg~~~~~~~~~~~f~~~~~dGilGLg~~~~s 180 (375)
T 1miq_A 120 ----------K-VDITYGSGTV-KGFFSKDLVTLGH------LSMPY-KFIEVTDTDDLEPIYSSVEFDGILGLGWKDLS 180 (375)
T ss_dssp ----------E-EEEEETTEEE-EEEEEEEEEEETT------EEEEE-EEEEEEECGGGTTHHHHSCCCEEEECSSCCTT
T ss_pred ----------E-EEEEeCCCeE-EEEEEEEEEEEcC------ceECc-EEEEEEeccccccccccCCCceEEeCCCCccc
Confidence 2 9999999995 5999999999998 78888 9999987 32 457999999998765
Q ss_pred h------hhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEEC
Q 037706 152 V------PSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIG 220 (394)
Q Consensus 152 ~------~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~ 220 (394)
. +.+|.. .+++||+||.+. ....|.|+|||+|+. +.+++.|+|+.. +.+|.|.++ |.|+
T Consensus 181 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~-----~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~-i~v~ 250 (375)
T 1miq_A 181 IGSIDPIVVELKNQNKIDNALFTFYLPVH-----DVHAGYLTIGGIEEKFYEGNITYEKLNH----DLYWQIDLD-VHFG 250 (375)
T ss_dssp CSSCCCHHHHHHHTTSSSSSEEEEECCTT-----CTTEEEEEESSCCGGGEEEEEEEEEBSS----SSSSEEEEE-EEET
T ss_pred ccCCCCHHHHHHhccCcCCCEEEEEecCC-----CCCCeEEEEcccCHHHcCCceEEEecCC----CceEEEEEE-EEEC
Confidence 4 334433 368999999974 136899999999987 488999999964 358999999 9999
Q ss_pred CEEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCC
Q 037706 221 NSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDD 300 (394)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 300 (394)
++ .+ . ...+||||||++++||+++|++|++++.+.... . .......|+. .
T Consensus 251 g~-~~--~----------~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~---~----~g~~~~~C~~----------~ 300 (375)
T 1miq_A 251 KQ-TM--E----------KANVIVDSGTTTITAPSEFLNKFFANLNVIKVP---F----LPFYVTTCDN----------K 300 (375)
T ss_dssp TE-EE--E----------EEEEEECTTBSSEEECHHHHHHHHHHHTCEECT---T----SSCEEEETTC----------T
T ss_pred CE-Ec--c----------cceEEecCCCccEEcCHHHHHHHHHHhCCcccC---C----CCeEEEECCC----------C
Confidence 98 65 1 246999999999999999999999998653220 0 0001223443 3
Q ss_pred CCCeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 037706 301 LFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMD 379 (394)
Q Consensus 301 ~~P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~ 379 (394)
.+|+|+|+| +|+.|+|+|++|+++.... ....|+ +|+..... .+.||||++|||++|+|||++++|||||+++
T Consensus 301 ~~P~i~f~f-~g~~~~l~~~~yi~~~~~~---g~~~C~~~~~~~~~~--~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 301 EMPTLEFKS-ANNTYTLEPEYYMNPILEV---DDTLCMITMLPVDID--SNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp TCCCEEEEC-SSCEEEECGGGSEEESSSS---SCSEEEESEEECCSS--SSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCCcEEEEE-CCEEEEECHHHhEeeccCC---CCCeEEEEEEECCCC--CCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 579999999 5799999999999875321 235899 88876531 2589999999999999999999999999864
No 27
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.7e-48 Score=381.92 Aligned_cols=306 Identities=17% Similarity=0.250 Sum_probs=226.7
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL 81 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~ 81 (394)
|.|+|||||+++||+|. .|..| ++.|+|++|+||+...|.
T Consensus 36 ~~v~~DTGSs~lWv~~~----~c~~~--------~~~y~~~~SsT~~~~~~~---------------------------- 75 (395)
T 2qp8_A 36 LNILVDTGSSNFAVGAA----PHPFL--------HRYYQRQLSSTYRDLRKG---------------------------- 75 (395)
T ss_dssp EEEEEETTCCCEEEECS----CCTTC--------SCCCCGGGCTTCEEEEEE----------------------------
T ss_pred EEEEEecCCCceEEECC----CCccc--------cCCcCcccCCCceeCCce----------------------------
Confidence 78999999999999998 77654 478999999999876532
Q ss_pred CCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCC------CCcceEeecCCCCCCh---
Q 037706 82 KSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTY------REPIGIAGFGRGALSV--- 152 (394)
Q Consensus 82 ~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~------~~~dGIlGLg~~~~S~--- 152 (394)
|.++|++|+. +|.+++|+|+|++... +.+ .+.|+++.... ...+||||||+..++.
T Consensus 76 ----------~~i~Yg~Gs~-~G~~~~Dtv~ig~g~~---~~~-~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~ 140 (395)
T 2qp8_A 76 ----------VYVPYTQGKW-EGELGTDLVSIPHGPN---VTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDD 140 (395)
T ss_dssp ----------EEEECSSCEE-EEEEEEEEEECTTSCS---CEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCT
T ss_pred ----------EEEEECCcEE-EEEEEeEEEEECCCCC---ceE-EEEEEEEEccCcccccccCccceEEcCchhhccCCC
Confidence 9999999998 5999999999984110 222 25577665321 3479999999976543
Q ss_pred -----hhhhcc---CCCceEEeccCccCCCC-----CCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEE
Q 037706 153 -----PSQLGF---LQKGFSHCFLAFKYAND-----PNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAIT 218 (394)
Q Consensus 153 -----~~ql~~---~~~~Fs~~l~~~~~~~~-----~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~ 218 (394)
+.+|.. ++++||+||.+..+..+ ....|.|+|||+|+. +.+++.|+|+.. +.+|.|.|++|+
T Consensus 141 ~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~ 216 (395)
T 2qp8_A 141 SLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVE 216 (395)
T ss_dssp TSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEE
T ss_pred CCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCC----CceEEEEEEEEE
Confidence 335543 46899999986311100 135799999999987 488999999975 358999999999
Q ss_pred ECCEEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCccccc-ccCCCCccCCCCCCCCC
Q 037706 219 IGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEE-RTGFDLCYRVPCPNNTF 297 (394)
Q Consensus 219 v~~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~-~~~~~~C~~~~~~~~~~ 297 (394)
|+++ .+.++...+. ...+||||||++++||+++|++|+++|.+.... ..... .. ......|+.... .
T Consensus 217 v~g~-~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~-~~~~~-~~~~~~~~~C~~~~~----~ 284 (395)
T 2qp8_A 217 INGQ-DLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST-EKFPD-GFWLGEQLVCWQAGT----T 284 (395)
T ss_dssp ETTE-ECCCCGGGGG-----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTT-SCCCH-HHHTTCSCEEESTTC----C
T ss_pred ECCE-EcccCccccC-----CceEEEEcCCCcEecCHHHHHHHHHHHhhhccc-ccCCc-ccccccccccccccc----c
Confidence 9999 8766543221 357999999999999999999999999877541 11100 00 011357886521 1
Q ss_pred CCCCCCeEEEEEeCCe-----EEEecCCCeEEEecCCCCCCceEEE--EEEeCCCCCCCCceeecccceeeeEEEEeCCC
Q 037706 298 TDDLFPSITFHFLNNV-----SLVLPQGNHFYAMSAPSNSSAVKCL--LFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEK 370 (394)
Q Consensus 298 ~~~~~P~i~f~f~gg~-----~~~i~~~~y~~~~~~~~~~~~~~C~--~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~ 370 (394)
....+|+|+|+|.|+. +|+|+|++|+++..... +....|+ +++... +.||||++|||++|+|||+++
T Consensus 285 ~~~~~P~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~~~-~~~~~C~~~~i~~~~-----~~~ILG~~fl~~~yvvfD~~~ 358 (395)
T 2qp8_A 285 PWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVA-TSQDDCYKFAISQSS-----TGTVMGAVIMEGFYVVFDRAR 358 (395)
T ss_dssp CGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTT-CCSCEEEEECEEEES-----SCEEECHHHHTTEEEEEETTT
T ss_pred hHhhCCcEEEEEccCCCCceEEEEECHHHhEeecccCC-CCCceEEEEEecCCC-----CcEEEChHHhCCeeEEEECCC
Confidence 2347999999998653 79999999998764211 1235897 444322 369999999999999999999
Q ss_pred CEEEEecCCCcchh
Q 037706 371 ERIGFQPMDCASTA 384 (394)
Q Consensus 371 ~riGfa~~~c~~~~ 384 (394)
+|||||+++|....
T Consensus 359 ~rIGfA~~~c~~~~ 372 (395)
T 2qp8_A 359 KRIGFAVSACHVHD 372 (395)
T ss_dssp TEEEEEEETTCCCC
T ss_pred CEEEEEeccCCCCC
Confidence 99999999998643
No 28
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.9e-48 Score=390.12 Aligned_cols=302 Identities=23% Similarity=0.368 Sum_probs=226.4
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCC---CCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCM---DCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLS 78 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~---~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~ 78 (394)
|.|+|||||+++||+|. .|. .|.. ++.|+|++|+||+...|
T Consensus 67 ~~v~~DTGSs~lWV~~~----~C~~~~~C~~------~~~y~~~~SsT~~~~~~-------------------------- 110 (478)
T 1qdm_A 67 FTVIFDTGSSNLWVPSA----KCYFSIACYL------HSRYKAGASSTYKKNGK-------------------------- 110 (478)
T ss_dssp EEEEEETTCCCCEEEBT----TCCSCGGGGG------SCCBCGGGCTTCBCCCC--------------------------
T ss_pred EEEEEcCCCcceEEecC----CCCCCccccC------CCCCCcccCCCeeeCCc--------------------------
Confidence 78999999999999998 785 5764 58999999999986432
Q ss_pred ccCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCC------CcceEeecCCCCCCh
Q 037706 79 TLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYR------EPIGIAGFGRGALSV 152 (394)
Q Consensus 79 ~~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~------~~dGIlGLg~~~~S~ 152 (394)
. |.+.|++|++ +|++++|+|+|++ +++.++.|||++.+.+ ..|||||||+..+|+
T Consensus 111 -----------~-~~i~Yg~Gs~-~G~~~~Dtv~ig~------~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~ 171 (478)
T 1qdm_A 111 -----------P-AAIQYGTGSI-AGYFSEDSVTVGD------LVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISV 171 (478)
T ss_dssp -----------E-EEEEETTEEE-EEEEEEEEEEETT------EEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCG
T ss_pred -----------E-EEEEcCCCCe-EEEEEEEEEEECC------eEECCEEEEEEEecCCcccccccccceeccccccccc
Confidence 2 9999999995 5999999999998 7889999999987543 369999999988764
Q ss_pred h------hhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcCC-CCCceeecCccCCCCCCceEEEeeEEEECC
Q 037706 153 P------SQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAISS-KDNLQFTPMLKSPMYPNYYYIGLEAITIGN 221 (394)
Q Consensus 153 ~------~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~~-~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~ 221 (394)
. .+|.. .+++||+||.+.. +...+|.|+|||+|+.+ .+++.|+|+.. ..+|.|.|++|.|++
T Consensus 172 ~~~~p~~~~l~~qg~i~~~~FS~~L~~~~---~~~~~G~l~fGg~d~~~~~G~l~~~pv~~----~~~w~v~l~~i~v~g 244 (478)
T 1qdm_A 172 GKAVPVWYKMIEQGLVSDPVFSFWLNRHV---DEGEGGEIIFGGMDPKHYVGEHTYVPVTQ----KGYWQFDMGDVLVGG 244 (478)
T ss_dssp GGCCCHHHHHTTTTCCSSSEEEEECCCC--------CEEEEETCCCTTSEEEEEEEEEEEE----ETTEEEEECCEEETT
T ss_pred CCCCcHHHHHHHCCCCCCCEEEEEeecCC---CCCCCeEEEeCCcCHhhcCCCceEEeccC----CCeEEEEEeEEEECC
Confidence 3 23333 2589999998741 12458999999999874 88999999975 358999999999999
Q ss_pred EEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhc----------cC---------CCCcc-----
Q 037706 222 SSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTIT----------YY---------PRAKE----- 277 (394)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~----------~~---------~~~~~----- 277 (394)
+ .+.+.. ++..+||||||++++||+++|++|.++|.+... .| .+...
T Consensus 245 ~-~~~~~~--------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~ 315 (478)
T 1qdm_A 245 K-STGFCA--------GGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICS 315 (478)
T ss_dssp E-ECSTTT--------TCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHH
T ss_pred E-EEeecC--------CCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhc
Confidence 8 765432 246799999999999999999999998854210 00 00000
Q ss_pred --------------------ccc--------------------------------------ccCCCCccCCCCCCC----
Q 037706 278 --------------------VEE--------------------------------------RTGFDLCYRVPCPNN---- 295 (394)
Q Consensus 278 --------------------~~~--------------------------------------~~~~~~C~~~~~~~~---- 295 (394)
.+. ......|+..+....
T Consensus 316 ~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v 395 (478)
T 1qdm_A 316 QVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAV 395 (478)
T ss_dssp HTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEE
T ss_pred cccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEe
Confidence 000 000135665543211
Q ss_pred CC-CCCCCCeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCC-CCCCceeecccceeeeEEEEeCCCCE
Q 037706 296 TF-TDDLFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDG-DYGPSGVFGSFQQQNVEVVYDLEKER 372 (394)
Q Consensus 296 ~~-~~~~~P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~-~~~~~~ILG~~fl~~~yvvfD~~~~r 372 (394)
.+ ....+|+|+|+| ||+.|+|+|++|+++.... ....|+ +|+..+.. ..++.||||++|||++|+|||++|+|
T Consensus 396 ~C~~~~~lP~i~f~~-gg~~~~l~p~~yi~~~~~~---~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~r 471 (478)
T 1qdm_A 396 DCGSLGSMPDIEFTI-GGKKFALKPEEYILKVGEG---AAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLR 471 (478)
T ss_dssp CGGGGTTCCCEEEEE-TTEEEEECHHHHEEECSCG---GGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTE
T ss_pred ecccccccccEEEEE-CCEEEEEChHHhEEEccCC---CCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCE
Confidence 00 125799999999 5799999999999876421 246899 57755422 12468999999999999999999999
Q ss_pred EEEecC
Q 037706 373 IGFQPM 378 (394)
Q Consensus 373 iGfa~~ 378 (394)
||||++
T Consensus 472 IGfA~a 477 (478)
T 1qdm_A 472 IGFAKA 477 (478)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 999985
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=3.7e-48 Score=381.90 Aligned_cols=309 Identities=17% Similarity=0.246 Sum_probs=225.6
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL 81 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~ 81 (394)
|.|+|||||+++||+|. +| |.. ++.|+|++|+||+...|.
T Consensus 43 ~~v~~DTGSs~lWv~~~----~c--~~~------~~~y~~~~SsT~~~~~~~---------------------------- 82 (402)
T 3vf3_A 43 LNILVDTGSSNFAVGAA----PH--PFL------HRYYQRQLSSTYRDLRKG---------------------------- 82 (402)
T ss_dssp EEEEEETTCCCEEEECS----CC--TTC------SCCCCGGGCTTCEEEEEE----------------------------
T ss_pred EEEEEeCCCCceEEccC----CC--Ccc------cCCcCcccCcccccCCCE----------------------------
Confidence 78999999999999998 67 432 589999999999976532
Q ss_pred CCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecC-cEEEecccCCC------CCcceEeecCCCCCC---
Q 037706 82 KSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIP-KFCFGCVGSTY------REPIGIAGFGRGALS--- 151 (394)
Q Consensus 82 ~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~-~~~fg~~~~~~------~~~dGIlGLg~~~~S--- 151 (394)
|.+.|++|+. +|.+++|+|+|++. ..+. .+.|+++.... ...+||||||+..++
T Consensus 83 ----------~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~ 146 (402)
T 3vf3_A 83 ----------VYVPYTQGKW-EGELGTDLVSIPHG-----PNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPD 146 (402)
T ss_dssp ----------EEEECSSCEE-EEEEEEEEEECTTS-----CSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSC
T ss_pred ----------EEEEECcEEE-EEEEEEEEEEECCc-----cccceeeeEEEEEccccccccCCCccceEEcCchhhcccC
Confidence 9999999997 59999999999852 1222 24467765432 247999999987654
Q ss_pred -----hhhhhcc---CCCceEEeccCccCCCC-----CCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEE
Q 037706 152 -----VPSQLGF---LQKGFSHCFLAFKYAND-----PNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAI 217 (394)
Q Consensus 152 -----~~~ql~~---~~~~Fs~~l~~~~~~~~-----~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i 217 (394)
++.+|.. ++++||+||.+..+.++ ....|.|+|||+|+. +.+++.|+|+.. +.+|.|.+++|
T Consensus 147 ~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i 222 (402)
T 3vf3_A 147 DSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRV 222 (402)
T ss_dssp TTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSS----BTTBEECEEEE
T ss_pred CcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCc----CcEEEEEEeEE
Confidence 3445544 45899999975321111 345899999999988 489999999975 35899999999
Q ss_pred EECCEEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCC
Q 037706 218 TIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTF 297 (394)
Q Consensus 218 ~v~~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ 297 (394)
.|+++ .+.++...+ +...+||||||++++||+++|++|+++|.+... ..+............|+.... .
T Consensus 223 ~v~g~-~~~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~-~~~~~~~~~~~~~~~C~~~~~----~ 291 (402)
T 3vf3_A 223 EINGQ-DLKMDCKEY-----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS-TEKFPDGFWLGEQLVCWQAGT----T 291 (402)
T ss_dssp EETTE-ECCCCGGGG-----GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT-TSCCCTTGGGTCSCEEEETTC----C
T ss_pred EECCE-Eeccccccc-----CCCeEEEECCCCcccCCHHHHHHHHHHHhhhcc-ccccCcccccccccccccccc----c
Confidence 99999 877643321 135799999999999999999999999998754 111110000112457876521 1
Q ss_pred CCCCCCeEEEEEeCCe-----EEEecCCCeEEEecCCCCCCceEEEEEEeCCCCCCCCceeecccceeeeEEEEeCCCCE
Q 037706 298 TDDLFPSITFHFLNNV-----SLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKER 372 (394)
Q Consensus 298 ~~~~~P~i~f~f~gg~-----~~~i~~~~y~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~r 372 (394)
....+|+|+|+|.|+. +|+|+|++|+++..... .....|+++..... .+.||||++|||++|+|||++++|
T Consensus 292 ~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~-~~~~~C~~~~~~~~---~~~~ILG~~fl~~~yvvfD~~~~r 367 (402)
T 3vf3_A 292 PWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVA-TSQDDCYKFAISQS---STGTVMGAVIMEGFYVVFDRARKR 367 (402)
T ss_dssp CGGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCGG-GTTEEEEEECEEEE---SSCEEECHHHHTTEEEEEEGGGTE
T ss_pred hHhhCCceEEEEecCCCCceEEEEECHHHheehhccCC-CCCceEEEEeccCC---CCcEEEChHHhCCeEEEEECCCCE
Confidence 1347999999997643 69999999998764211 01258996432111 146999999999999999999999
Q ss_pred EEEecCCCcchhh
Q 037706 373 IGFQPMDCASTAS 385 (394)
Q Consensus 373 iGfa~~~c~~~~~ 385 (394)
||||+++|+...+
T Consensus 368 IGfA~~~c~~~~~ 380 (402)
T 3vf3_A 368 IGFAVSACHVHDE 380 (402)
T ss_dssp EEEEEETTCCBCS
T ss_pred EEEEecccCcccC
Confidence 9999999997644
No 30
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=8.5e-48 Score=384.86 Aligned_cols=309 Identities=17% Similarity=0.241 Sum_probs=230.5
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL 81 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~ 81 (394)
|.|+|||||+++||+|. .| |.. ++.|+|++|+||+...|.
T Consensus 89 ~~v~~DTGSs~lWV~~~----~c--c~~------~~~y~~~~SsT~~~~~~~---------------------------- 128 (455)
T 3lpj_A 89 LNILVDTGSSNFAVGAA----PH--PFL------HRYYQRQLSSTYRDLRKG---------------------------- 128 (455)
T ss_dssp EEEEEETTCCCEEEECS----CC--TTC------SCCCCGGGCTTCEEEEEE----------------------------
T ss_pred EEEEEcCCCcceEEecc----cc--ccc------CCcccCCCCCCcccCCcc----------------------------
Confidence 78999999999999998 67 543 689999999999876532
Q ss_pred CCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCC------CCcceEeecCCCCCCh---
Q 037706 82 KSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTY------REPIGIAGFGRGALSV--- 152 (394)
Q Consensus 82 ~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~------~~~dGIlGLg~~~~S~--- 152 (394)
|.+.|++|+. .|.+++|+|+|++... +.+ .+.|+++.... ...+||||||+..++.
T Consensus 129 ----------~~i~Yg~Gs~-~G~~~~Dtv~ig~~~~---~~~-~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~ 193 (455)
T 3lpj_A 129 ----------VYVPYTQGKW-EGELGTDLVSIPHGPN---VTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDD 193 (455)
T ss_dssp ----------EEEECSSCEE-EEEEEEEEEECTTSCS---CEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCT
T ss_pred ----------EEEEeCCeEE-EEEEEEEEEEECCCcc---eee-EEEEEEEEccCcccccCCCcceEEEeCccccccccC
Confidence 9999999998 5999999999985211 232 35678776432 2479999999876543
Q ss_pred -----hhhhcc---CCCceEEeccCccCCCC-----CCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEE
Q 037706 153 -----PSQLGF---LQKGFSHCFLAFKYAND-----PNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAIT 218 (394)
Q Consensus 153 -----~~ql~~---~~~~Fs~~l~~~~~~~~-----~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~ 218 (394)
+.+|.. ++++||+||.+..+..+ ....|.|+|||+|+. +.+++.|+|+.. +.+|.|.+++|.
T Consensus 194 ~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~ 269 (455)
T 3lpj_A 194 SLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVE 269 (455)
T ss_dssp TSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEE
T ss_pred CCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCC----CceeEEEEeEEE
Confidence 344543 45899999986321100 245899999999988 489999999975 358999999999
Q ss_pred ECCEEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCC
Q 037706 219 IGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFT 298 (394)
Q Consensus 219 v~~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 298 (394)
|+++ .+.++...+ +...+||||||++++||+++|++|+++|.+... ..+............|+.... ..
T Consensus 270 v~g~-~~~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~-~~~~~~~~~~g~~~~C~~~~~----~~ 338 (455)
T 3lpj_A 270 INGQ-DLKMDCKEY-----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS-TEKFPDGFWLGEQLVCWQAGT----TP 338 (455)
T ss_dssp ETTE-ECCCCGGGG-----GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTT-TSCCCHHHHTTCSCEEESTTC----CC
T ss_pred ECCE-Ecccccccc-----CCCeEEEECCCcceeCCHHHHHHHHHHhhhhcc-ccccCcccccCcceecccccC----Cc
Confidence 9999 877653322 135799999999999999999999999998754 111110000112467887621 11
Q ss_pred CCCCCeEEEEEeCCe-----EEEecCCCeEEEecCCCCCCceEEEEEEeCCCCCCCCceeecccceeeeEEEEeCCCCEE
Q 037706 299 DDLFPSITFHFLNNV-----SLVLPQGNHFYAMSAPSNSSAVKCLLFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERI 373 (394)
Q Consensus 299 ~~~~P~i~f~f~gg~-----~~~i~~~~y~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~ri 373 (394)
...+|+|+|+|.|+. +|+|+|++|+++..... +....|++|..... .+.||||++|||++|+|||++++||
T Consensus 339 ~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~-~~~~~C~~f~~~~~---~~~~ILG~~fl~~~yvvfD~~~~rI 414 (455)
T 3lpj_A 339 WNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVA-TSQDDCYKFAISQS---STGTVMGAVIMEGFYVVFDRARKRI 414 (455)
T ss_dssp GGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTT-CCSCEEEEECEEEE---SSCEEECHHHHTTEEEEEETTTTEE
T ss_pred hhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCCC-CCCceEEEEeccCC---CCcEEEChHHhCCeEEEEECCCCEE
Confidence 346999999998643 69999999999875321 11358997432211 2479999999999999999999999
Q ss_pred EEecCCCcchh
Q 037706 374 GFQPMDCASTA 384 (394)
Q Consensus 374 Gfa~~~c~~~~ 384 (394)
|||+++|+...
T Consensus 415 GfA~~~c~~~~ 425 (455)
T 3lpj_A 415 GFAVSACHVHD 425 (455)
T ss_dssp EEEEETTCCCC
T ss_pred EEEeccccccc
Confidence 99999998765
No 31
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=5e-48 Score=383.47 Aligned_cols=276 Identities=22% Similarity=0.346 Sum_probs=221.0
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCC--CCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCM--DCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLST 79 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~--~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~ 79 (394)
|.|+|||||+++||+|. .|. .|.. ++.|+|++|+||+...|
T Consensus 153 ~~vi~DTGSs~lWV~~~----~C~~~~C~~------~~~ydps~SsT~~~~~~--------------------------- 195 (453)
T 2bju_A 153 FTFILDTGSANLWVPSV----KCTTAGCLT------KHLYDSSKSRTYEKDGT--------------------------- 195 (453)
T ss_dssp EEEEEETTCCCEEEEBT----TCCSTTGGG------SCCBCGGGCTTCEEEEE---------------------------
T ss_pred EEEEEECCCcceEEecc----CCCccccCC------CCcCCCccCCceeECCc---------------------------
Confidence 78999999999999999 786 6764 68999999999987543
Q ss_pred cCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCC--C------CcceEeecCCCCCC
Q 037706 80 LLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTY--R------EPIGIAGFGRGALS 151 (394)
Q Consensus 80 ~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~--~------~~dGIlGLg~~~~S 151 (394)
. |.++|++|++ +|.+++|+|+|++ ++++ +.|||++... + ..+||||||++.++
T Consensus 196 ----------~-~~i~YgdGs~-~G~~~~Dtv~ig~------~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s 256 (453)
T 2bju_A 196 ----------K-VEMNYVSGTV-SGFFSKDLVTVGN------LSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLS 256 (453)
T ss_dssp ----------E-EEEECSSSEE-EEEEEEEEEEETT------EEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGS
T ss_pred ----------E-EEEEcCCCCe-EEEEEEEEEEEeC------cEEE-EEEEEEEEecccCccccccCCceeEeccCCccc
Confidence 2 9999999995 5999999999998 7888 9999998765 3 48999999998655
Q ss_pred h------hhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEEC
Q 037706 152 V------PSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIG 220 (394)
Q Consensus 152 ~------~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~ 220 (394)
. +.+|.. .+++||+||.+. ....|.|+|||+|+. +.+++.|+|+.. +.+|.|.++ |.|+
T Consensus 257 ~~~~~~~~~~L~~qg~i~~~~FS~~L~~~-----~~~~G~l~fGg~D~~~y~G~l~~~pv~~----~~~w~V~l~-I~Vg 326 (453)
T 2bju_A 257 IGSVDPIVVELKNQNKIENALFTFYLPVH-----DKHTGFLTIGGIEERFYEGPLTYEKLNH----DLYWQITLD-AHVG 326 (453)
T ss_dssp TTCCCCHHHHHHHTTSSSSCEEEEECCBT-----TTBCEEEEESSCCGGGEEEEEEEEEEEE----ETTEEEEEE-EEET
T ss_pred ccCCCcHHHHHHHCCCCCCCEEEEEeCCC-----CCCCeEEEECCCCHHHcCCceEEEecCC----CceEEEEEE-EEEC
Confidence 4 344433 268999999974 246899999999987 488999999975 358999999 9999
Q ss_pred CEEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCC
Q 037706 221 NSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDD 300 (394)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 300 (394)
+. .+ . ...+||||||++++||+++|++|.+++.+... . .+ ..|..+|.. .
T Consensus 327 g~-~~--~----------~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~~--------~--~g--~~~~v~C~~-----~ 376 (453)
T 2bju_A 327 NI-ML--E----------KANCIVDSGTSAITVPTDFLNKMLQNLDVIKV--------P--FL--PFYVTLCNN-----S 376 (453)
T ss_dssp TE-EE--E----------EEEEEECTTCCSEEECHHHHHHHTTTSSCEEC--------T--TS--SCEEEETTC-----T
T ss_pred cE-Ee--c----------cccEEEcCCCCeEecCHHHHHHHHHHhCCccc--------C--CC--ceEEEecCC-----C
Confidence 95 42 1 25699999999999999999999887643211 0 01 123344421 4
Q ss_pred CCCeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 037706 301 LFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMD 379 (394)
Q Consensus 301 ~~P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~ 379 (394)
.+|+|+|+| +|+.|+|+|++|+++.... ....|+ +|+..+.. .+.||||++|||++|+|||++++|||||+++
T Consensus 377 ~~P~itf~f-gg~~~~l~~~~yi~~~~~~---g~~~C~~~~~~~~~~--~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 377 KLPTFEFTS-ENGKYTLEPEYYLQHIEDV---GPGLCMLNIIGLDFP--VPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp TCCCEEEEC-SSCEEEECHHHHEEECTTT---STTEEEECEEECCCS--SCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCCcEEEEE-CCEEEEECHHHhEeecccC---CCceEEEEEEeCCCC--CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 589999999 5799999999999876421 245899 77766532 2489999999999999999999999999875
No 32
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=2.5e-47 Score=378.90 Aligned_cols=276 Identities=20% Similarity=0.344 Sum_probs=222.1
Q ss_pred EEEEEEcCCcceeEcCCCCCCCC--CCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDC--MDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLST 79 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C--~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~ 79 (394)
|.|+|||||+++||+|. .| ..|.. ++.|+|++|+|++...|
T Consensus 152 ~~vi~DTGSs~lWV~s~----~C~s~~C~~------~~~ydps~SsT~~~~~~--------------------------- 194 (451)
T 3qvc_A 152 FNFLFHTASSNVWVPSI----KCTSESCES------KNHYDSSKSKTYEKDDT--------------------------- 194 (451)
T ss_dssp EEEEEESSBCSEEEEBT----TCCSGGGTT------SCCBCGGGCTTCEEEEE---------------------------
T ss_pred EEEEEcCCCccEEEecC----CCCccccCC------CCCCCCCCCcccccCCC---------------------------
Confidence 78999999999999999 78 46864 68999999999986442
Q ss_pred cCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccC----CC----CCcceEeecCCCCCC
Q 037706 80 LLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGS----TY----REPIGIAGFGRGALS 151 (394)
Q Consensus 80 ~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~----~~----~~~dGIlGLg~~~~S 151 (394)
. |.+.|++|+ ++|.+++|+|+|++ ++++ +.|||++. .. ...+||||||++.++
T Consensus 195 ----------~-f~i~YgdGs-~~G~~~~Dtv~igg------~~v~-~~Fg~a~~t~~~~~~f~~~~~dGILGLg~~~~s 255 (451)
T 3qvc_A 195 ----------P-VKLTSKAGT-ISGIFSKDLVTIGK------LSVP-YKFIEMTEIVGFEPFYSESDVDGVFGLGWKDLS 255 (451)
T ss_dssp ----------E-EEEECSSEE-EEEEEEEEEEEETT------EEEE-EEEEEEEEEEECTTHHHHSCCCEEEECSSBCSS
T ss_pred ----------E-EEEEECCCE-EEEEEEEEEEEECC------EEEE-EEEEEEEeccccCCCccCCCCCEEEecCCCccc
Confidence 2 999999999 56999999999998 7888 99999987 32 357999999997644
Q ss_pred ------hhhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcCC-CCCceeecCccCCCCCCceEEEeeEEEEC
Q 037706 152 ------VPSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAISS-KDNLQFTPMLKSPMYPNYYYIGLEAITIG 220 (394)
Q Consensus 152 ------~~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~~-~~~~~~~p~~~~~~~~~~y~v~l~~i~v~ 220 (394)
++.+|.. .+++||+||.+. ....|.|+|||+|+++ .+++.|+|+.. +.+|.|.++ |.|+
T Consensus 256 ~~~~~~~~~~L~~qg~I~~~~FS~~L~~~-----~~~~G~l~fGgiD~s~y~G~l~~~pv~~----~~~w~v~l~-I~Vg 325 (451)
T 3qvc_A 256 IGSIDPYIVELKTQNKIEQAVYSIYLPPE-----NKNKGYLTIGGIEERFFDGPLNYEKLNH----DLMWQVDLD-VHFG 325 (451)
T ss_dssp SSCCCCHHHHHHHTTSSSSSEEEEECCTT-----CTTEEEEEESSCCGGGEEEEEEEEECSS----TTSSEEEEE-EEET
T ss_pred ccCCCCHHHHHHHcCCCCCCEEEEEEcCC-----CCCCCEEEECCcchhhcCCceEEEEccc----CCeeEEEEE-EEEC
Confidence 4555554 368999999974 2458999999999984 89999999974 358999999 9999
Q ss_pred CEEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCCC
Q 037706 221 NSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDD 300 (394)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 300 (394)
+. ... ...+||||||++++||++++++|.+++.+.... ...+|..||. ..
T Consensus 326 g~-~~~------------~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~------------~~g~y~v~C~-----~~ 375 (451)
T 3qvc_A 326 NV-SSK------------KANVILDSATSVITVPTEFFNQFVESASVFKVP------------FLSLYVTTCG-----NT 375 (451)
T ss_dssp TE-EEE------------EEEEEECTTBSSEEECHHHHHHHHTTTTCEECT------------TSSCEEEETT-----CT
T ss_pred Cc-cCC------------CceEEEeCCCccccCCHHHHHHHHHHcCCeecC------------CCCeEEeeCC-----cC
Confidence 87 211 246999999999999999999999877543220 1123455552 25
Q ss_pred CCCeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 037706 301 LFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMD 379 (394)
Q Consensus 301 ~~P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~ 379 (394)
.+|+|+|+| +|..++|+|++|+++..+. ....|+ +++..+.. .+.||||++|||++|+|||++++|||||+++
T Consensus 376 ~~P~itf~f-gg~~i~lp~~~yi~~~~~~---~~~~C~~~i~~~~~~--~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 376 KLPTLEYRS-PNKVYTLEPKQYLEPLENI---FSALCMLNIVPIDLE--KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp TCCCEEEEE-TTEEEEECHHHHEEECTTT---STTEEEECEEECCCS--TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cCCcEEEEE-CCEEEEEcHHHheeecccC---CCCeEEEEEEeCCCC--CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 689999999 5799999999999976431 246899 67665431 3589999999999999999999999999865
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.3e-46 Score=362.78 Aligned_cols=286 Identities=19% Similarity=0.283 Sum_probs=216.2
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCcccC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCMDCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLSTLL 81 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~~~~ 81 (394)
|.|+|||||+++||+|. +.|+|++|+++. .
T Consensus 27 ~~v~~DTGSs~lWv~~~------------------~~y~~s~Ss~~~--~------------------------------ 56 (340)
T 1wkr_A 27 YSLLVDTGSSNTWLGAD------------------KSYVKTSTSSAT--S------------------------------ 56 (340)
T ss_dssp EEEEEETTCCCCEECSS------------------SCCCCCTTCEEE--E------------------------------
T ss_pred EEEEEeCCChhheecCC------------------CccCCcCCcccc--C------------------------------
Confidence 78999999999999986 579998887542 1
Q ss_pred CCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCCC--CcceEeecCCCCCCh-------
Q 037706 82 KSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTYR--EPIGIAGFGRGALSV------- 152 (394)
Q Consensus 82 ~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~~--~~dGIlGLg~~~~S~------- 152 (394)
|. |.++|++|++ +|.+++|+|+|++ ++++++.|||+....+ ..+||||||+..+++
T Consensus 57 -------~~-~~i~Yg~Gs~-~G~~~~Dtv~~g~------~~v~~~~fg~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 121 (340)
T 1wkr_A 57 -------DK-VSVTYGSGSF-SGTEYTDTVTLGS------LTIPKQSIGVASRDSGFDGVDGILGVGPVDLTVGTLSPHT 121 (340)
T ss_dssp -------EE-EEEECSSCEE-EEEEEEEEEEETT------EEEEEEEEEEEEEEESCTTCSEEEECSCGGGGTTSEESCT
T ss_pred -------ce-EEEEECCcEE-EEEEEEEEEEECC------EEEcceEEEEEEccCCCcCCCcEEECCccccccccccccc
Confidence 22 9999999985 5999999999998 8899999999987532 479999999987654
Q ss_pred -------hhhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcC-CCCCceeecCccCCCCCCceEEEeeEEEEC
Q 037706 153 -------PSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIG 220 (394)
Q Consensus 153 -------~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~ 220 (394)
+.+|.. .+++||+||.+... .....|.|+|||+|+. +.+++.|+|++.+...+.+|.|. ++|.|+
T Consensus 122 ~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~--~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~ 198 (340)
T 1wkr_A 122 STSIPTVTDNLFSQGTIPTNLLAVSFEPTTS--ESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYG 198 (340)
T ss_dssp TCCCCCHHHHHHHTTSSSSSEEEEECCCCSS--SSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEET
T ss_pred cccCCCHHHHHHHcCCCCCCEEEEEecCCCC--CCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEEC
Confidence 333332 25899999986311 1235799999999987 58999999998754335689999 999999
Q ss_pred C-EEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHHhhccCCCCcccccccCCCCccCCCCCCCCCCC
Q 037706 221 N-SSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTD 299 (394)
Q Consensus 221 ~-~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 299 (394)
+ + .+.. ...+||||||++++||+++|++|.+++.+.... ....|..||.. .
T Consensus 199 ~~~-~l~~-----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~------------~~g~~~~~C~~----~ 250 (340)
T 1wkr_A 199 SST-SILS-----------STAGIVDTGTTLTLIASDAFAKYKKATGAVADN------------NTGLLRLTTAQ----Y 250 (340)
T ss_dssp TTE-EEEE-----------EEEEEECTTBCSEEECHHHHHHHHHHHTCEECT------------TTSSEEECHHH----H
T ss_pred CCe-EccC-----------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcC------------CCCeEEeeccc----c
Confidence 8 7 6532 136999999999999999999998877544321 01123333310 1
Q ss_pred CCCCeEEEEEeCCeEEEecCCCeEEEecCCC--CCCceEEE-EEEeCCCC-CCCCceeecccceeeeEEEEeCCCCEEEE
Q 037706 300 DLFPSITFHFLNNVSLVLPQGNHFYAMSAPS--NSSAVKCL-LFQSMDDG-DYGPSGVFGSFQQQNVEVVYDLEKERIGF 375 (394)
Q Consensus 300 ~~~P~i~f~f~gg~~~~i~~~~y~~~~~~~~--~~~~~~C~-~~~~~~~~-~~~~~~ILG~~fl~~~yvvfD~~~~riGf 375 (394)
..+|+|.|+| +|..|+|+|++|+++..... ++....|+ ++...... ..+..||||++|||++|+|||++++||||
T Consensus 251 ~~~p~i~f~f-~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igf 329 (340)
T 1wkr_A 251 ANLQSLFFTI-GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGL 329 (340)
T ss_dssp HTCCCEEEEE-TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEE
T ss_pred ccCCcEEEEE-CCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEE
Confidence 4679999999 56999999999997643100 01124676 66653321 12246999999999999999999999999
Q ss_pred ecCCCcchh
Q 037706 376 QPMDCASTA 384 (394)
Q Consensus 376 a~~~c~~~~ 384 (394)
|+++|++..
T Consensus 330 A~~~~~~~~ 338 (340)
T 1wkr_A 330 ATTSFTTAT 338 (340)
T ss_dssp EECTTTTCC
T ss_pred EecCCCCCC
Confidence 999998643
No 34
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.9e-36 Score=277.77 Aligned_cols=220 Identities=21% Similarity=0.275 Sum_probs=169.1
Q ss_pred eecCcEEEecccCCCC------CcceEeecCCCCCC------hhhhhcc----CCCceEEeccCccCCCCCCCCccEEEc
Q 037706 122 REIPKFCFGCVGSTYR------EPIGIAGFGRGALS------VPSQLGF----LQKGFSHCFLAFKYANDPNISSPLVIG 185 (394)
Q Consensus 122 ~~~~~~~fg~~~~~~~------~~dGIlGLg~~~~S------~~~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fG 185 (394)
++++++.|||++.+.+ ..|||||||++.++ ++.+|.. .+++||+||.+.. .....|.|+||
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~---~~~~~G~l~fG 79 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDP---DAQPGGELMLG 79 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSST---TCSSCEEEEET
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCC---CCCCCcEEEEC
Confidence 7888999999987643 47999999998755 3345543 3689999998742 11248999999
Q ss_pred ccCcC-CCCCceeecCccCCCCCCceEEEeeEEEECCEEeeeecCcceeccCCCCCceEEcccCceeecChHHHHHHHHH
Q 037706 186 DVAIS-SKDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSI 264 (394)
Q Consensus 186 g~d~~-~~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~ 264 (394)
|+|+. +.+++.|+|+.. +.+|.|.+++|+|+++ .+... ....+||||||++++||+++|++|.++
T Consensus 80 g~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~-~~~~~---------~~~~aiiDSGTt~~~lP~~~~~~l~~~ 145 (241)
T 1lya_B 80 GTDSKYYKGSLSYLNVTR----KAYWQVHLDQVEVASG-LTLCK---------EGCEAIVDTGTSLMVGPVDEVRELQKA 145 (241)
T ss_dssp SCCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTS-CEEST---------TCEEEEECTTCSSEEECHHHHHHHHHH
T ss_pred CcCHHHcCCceEEEECcc----ccEEEEEEeEEEECCe-eEecc---------CCCEEEEECCCccccCCHHHHHHHHHH
Confidence 99987 488999999974 3589999999999998 64211 235799999999999999999999998
Q ss_pred HHHhhccCCCCcccccccCCCCccCCCCCCCCCCCCCCCeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeC
Q 037706 265 LQSTITYYPRAKEVEERTGFDLCYRVPCPNNTFTDDLFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSM 343 (394)
Q Consensus 265 i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~ 343 (394)
+.+.... .......|+.. ..+|+|+|+| +|++++|+|++|+++.... ....|+ +|+..
T Consensus 146 ~~~~~~~--------~g~~~~~C~~~---------~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~---~~~~C~~~~~~~ 204 (241)
T 1lya_B 146 IGAVPLI--------QGEYMIPCEKV---------STLPAITLKL-GGKGYKLSPEDYTLKVSQA---GKTLCLSGFMGM 204 (241)
T ss_dssp HTCEEEE--------TTEEEEEGGGG---------GGSCCEEEEE-TTEEEEECTTTSEEEETTT---TSSEEEESEEEC
T ss_pred hCCeecc--------CCcEEEECCCC---------ccCCeEEEEE-CCEEEEECHHHhEEEccCC---CCCeeEEEEEec
Confidence 8543220 00112345543 4689999999 5799999999999986421 246899 58765
Q ss_pred CCC-CCCCceeecccceeeeEEEEeCCCCEEEEecCC
Q 037706 344 DDG-DYGPSGVFGSFQQQNVEVVYDLEKERIGFQPMD 379 (394)
Q Consensus 344 ~~~-~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~~ 379 (394)
+.. ...+.||||++|||++|+|||++++|||||+++
T Consensus 205 ~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 205 DIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp CCCTTTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccCCCCCCeEEechHHhcceEEEEECCCCEEEEEEcC
Confidence 421 123579999999999999999999999999864
No 35
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2.8e-36 Score=276.24 Aligned_cols=195 Identities=24% Similarity=0.377 Sum_probs=160.4
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCC---CCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCCc
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCM---DCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSLS 78 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~---~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~~ 78 (394)
|.|+|||||+++||+|. .|. .|.. ++.|+|++|+||+...|
T Consensus 28 ~~v~~DTGSs~lWv~~~----~C~~~~~C~~------~~~y~~~~SsT~~~~~~-------------------------- 71 (239)
T 1b5f_A 28 FTVIFDTGSSVLWVPSS----KCINSKACRA------HSMYESSDSSTYKENGT-------------------------- 71 (239)
T ss_dssp EEEEEETTCCCEEEEBT----TCCSCHHHHT------SCCBCGGGCTTCEEEEE--------------------------
T ss_pred EEEEEeCCCcceEEEcC----CCCCCcccCC------CCCCCCccCCCeeeCCc--------------------------
Confidence 78999999999999998 786 5764 58999999999986543
Q ss_pred ccCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeecCCCCceeecCcEEEecccCCC------CCcceEeecCCCCCCh
Q 037706 79 TLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHGSSPGIIREIPKFCFGCVGSTY------REPIGIAGFGRGALSV 152 (394)
Q Consensus 79 ~~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~~~~~~~~~~~~~~fg~~~~~~------~~~dGIlGLg~~~~S~ 152 (394)
. |.+.|++|++ +|.+++|+|+|++ ++++++.|||+.... ...+||||||+..++.
T Consensus 72 -----------~-~~i~Yg~Gs~-~G~~~~D~v~~g~------~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~ 132 (239)
T 1b5f_A 72 -----------F-GAIIYGTGSI-TGFFSQDSVTIGD------LVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISV 132 (239)
T ss_dssp -----------E-EEEECSSCEE-EEEEEEEEEEETT------EEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSC
T ss_pred -----------E-EEEEECCCcE-EEEEEEEEEEECC------cEEccEEEEEEEeccCccccccCcceEEecCcccccc
Confidence 2 9999999985 5999999999998 788999999998643 2479999999998873
Q ss_pred h--hhhcc----CCCceEEeccCccCCCCCCCCccEEEcccCcCC-CCCceeecCccCCCCCCceEEEeeEEEECCEEee
Q 037706 153 P--SQLGF----LQKGFSHCFLAFKYANDPNISSPLVIGDVAISS-KDNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLT 225 (394)
Q Consensus 153 ~--~ql~~----~~~~Fs~~l~~~~~~~~~~~~G~l~fGg~d~~~-~~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~~~ 225 (394)
+ .+|.. .+++||+||.+.. +....|.|+||++|+.+ .+++.|+|+... .+|.|.|++|.|+++ .+
T Consensus 133 p~~~~l~~qg~i~~~~FS~~l~~~~---~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~-~~ 204 (239)
T 1b5f_A 133 PVWYNMLNQGLVKERRFSFWLNRNV---DEEEGGELVFGGLDPNHFRGDHTYVPVTYQ----YYWQFGIGDVLIGDK-ST 204 (239)
T ss_dssp CHHHHHHHTTCCSSSEEEEEECCSC---SSSCCEEEEETSCCGGGEEEEEEEEEEEEE----TTEEEEECCEEETTE-EC
T ss_pred HHHHHHHHCCCCCCCEEEEEEeCCC---CCCCCeEEEECCcChhhccCceEEEEcccC----CeEEEEeeEEEECCE-Ee
Confidence 3 23332 3589999998741 12468999999999874 789999999752 489999999999999 76
Q ss_pred eecCcceeccCCCCCceEEcccCceeecChHHHHHHHHHHHH
Q 037706 226 EVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFYSQLLSILQS 267 (394)
Q Consensus 226 ~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y~~l~~~i~~ 267 (394)
.+.. ....+||||||++++||+++|++|+++|.+
T Consensus 205 ~~~~--------~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 205 GFCA--------PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp CTTT--------TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred cccC--------CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 5432 235799999999999999999999998753
No 36
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.64 E-value=2.2e-16 Score=120.65 Aligned_cols=76 Identities=20% Similarity=0.381 Sum_probs=61.5
Q ss_pred CCCCeEEEEEeCCeEEEecCCCeEEEecCCCCCCceEEE-EEEeCCCCCCCCceeecccceeeeEEEEeCCCCEEEEecC
Q 037706 300 DLFPSITFHFLNNVSLVLPQGNHFYAMSAPSNSSAVKCL-LFQSMDDGDYGPSGVFGSFQQQNVEVVYDLEKERIGFQPM 378 (394)
Q Consensus 300 ~~~P~i~f~f~gg~~~~i~~~~y~~~~~~~~~~~~~~C~-~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfa~~ 378 (394)
..+|+|+|+| ||+.++|+|++|+++.... ....|+ +++..+....++.||||++|||++|+|||++|+|||||++
T Consensus 11 ~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~---~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA~~ 86 (87)
T 1b5f_B 11 SSMPNVSFTI-GGKKFGLTPEQYILKVGKG---EATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFAEA 86 (87)
T ss_dssp GGCCCEEEEE-TTEEEEECHHHHEEEESCT---TTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred CcCCcEEEEE-CCEEEEECHHHhEEEccCC---CCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEEEc
Confidence 4689999999 5799999999999876421 246899 6776542112358999999999999999999999999986
Q ss_pred C
Q 037706 379 D 379 (394)
Q Consensus 379 ~ 379 (394)
+
T Consensus 87 ~ 87 (87)
T 1b5f_B 87 A 87 (87)
T ss_dssp C
T ss_pred C
Confidence 3
No 37
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.59 E-value=8.2e-16 Score=119.60 Aligned_cols=65 Identities=34% Similarity=0.622 Sum_probs=57.3
Q ss_pred EEEEEEcCCcceeEcCCCCCCCCC----CCCcccCCCCCCCCCCCCCCCCcccCCCCccccCccCCCCCCCCCCCCCCCC
Q 037706 2 IQVYMDTGSDLTWVPCGNLSFDCM----DCDDYRNNKLMSNFSPSRSSSSSRDTCASSFCLNIHSSDNPFDPCTMSGCSL 77 (394)
Q Consensus 2 f~v~iDTGS~~~Wv~~~~~~~~C~----~C~~~~~~~~~~~f~~~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~c~~ 77 (394)
|.|+|||||+++||+|. .|. .|.. ++.|+|++|+||+...|
T Consensus 28 ~~v~~DTGSs~lWv~~~----~C~~~~~~C~~------~~~y~p~~SsT~~~~~~------------------------- 72 (97)
T 1lya_A 28 FTVVFDTGSSNLWVPSI----HCKLLDIACWI------HHKYNSDKSSTYVKNGT------------------------- 72 (97)
T ss_dssp EEEEEETTCCCEEEEBT----TCCTTCHHHHT------SCCBCGGGCTTCEEEEE-------------------------
T ss_pred EEEEEeCCCCceEEeEc----CccCcccccCC------CCCCCchhCCCceeCCC-------------------------
Confidence 78999999999999999 786 5764 68999999999987653
Q ss_pred cccCCCCCCCCCCCcEEeecCCCeEEEEEEEEEEEeec
Q 037706 78 STLLKSTCCRPCPSFAYTYGEGGLVTGILTRDTLKVHG 115 (394)
Q Consensus 78 ~~~~~~~~~~~c~~~~i~Yg~Gs~~~G~~~~D~v~l~~ 115 (394)
. |.|.|++|++ +|.+++|+|+|++
T Consensus 73 ------------~-~~i~Yg~Gs~-~G~~~~Dtv~i~g 96 (97)
T 1lya_A 73 ------------S-FDIHYGSGSL-SGYLSQDTVSVPC 96 (97)
T ss_dssp ------------E-EEEECSSCEE-EEEEEEEEEEESC
T ss_pred ------------c-EEEEECCcEE-EEEEEEEEEEECC
Confidence 2 9999999995 5999999999986
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=65.79 E-value=6.1 Score=31.74 Aligned_cols=27 Identities=11% Similarity=0.070 Sum_probs=24.8
Q ss_pred ceeecccceeeeEEEEeCCCCEEEEec
Q 037706 351 SGVFGSFQQQNVEVVYDLEKERIGFQP 377 (394)
Q Consensus 351 ~~ILG~~fl~~~yvvfD~~~~riGfa~ 377 (394)
..|||..||+.+-++.|..+++|-|..
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEETT
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEcc
Confidence 379999999999999999999999874
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=62.17 E-value=5.6 Score=32.29 Aligned_cols=28 Identities=14% Similarity=0.109 Sum_probs=25.3
Q ss_pred ceeecccceeeeEEEEeCCCCEEEEecC
Q 037706 351 SGVFGSFQQQNVEVVYDLEKERIGFQPM 378 (394)
Q Consensus 351 ~~ILG~~fl~~~yvvfD~~~~riGfa~~ 378 (394)
..|||.-||+.+-.+.|.+++++-|...
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 3799999999999999999999998764
No 40
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=51.88 E-value=12 Score=27.85 Aligned_cols=16 Identities=19% Similarity=0.457 Sum_probs=14.2
Q ss_pred ceEEcccCceeecChH
Q 037706 241 GLLVDSGTTYTHLPEP 256 (394)
Q Consensus 241 ~~iiDSGTtl~~lp~~ 256 (394)
.++||||++.+++|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 29 TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCceEEeEc
Confidence 3899999999999965
No 41
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=28.35 E-value=46 Score=31.61 Aligned_cols=46 Identities=20% Similarity=0.229 Sum_probs=29.1
Q ss_pred CCceeecCccCCCCCCceEEEeeEEEECCEEeeeecCcceeccCCCCCceEEcccCceeecChH
Q 037706 193 DNLQFTPMLKSPMYPNYYYIGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEP 256 (394)
Q Consensus 193 ~~~~~~p~~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~ 256 (394)
.+....||..+.. ...|.+. |.||.- ... ..++||||+.++++|-+
T Consensus 6 ~~~~~~pv~~d~~-~~~Y~~~---i~iGTP-pq~-------------~~v~~DTGS~~lWv~c~ 51 (413)
T 3vla_A 6 PSALVVPVKKDAS-TLQYVTT---INQRTP-LVS-------------ENLVVDLGGRFLWVDCD 51 (413)
T ss_dssp CSEEEEEEEECTT-TCCEEEE---EEETTT-TEE-------------EEEEEETTCSSEEEECS
T ss_pred CccEEEEeeecCC-CCeEEEE---EEcCCC-Ccc-------------eEEEEeCCChhhhcccC
Confidence 3444577766543 3456544 667763 211 24899999999999953
No 42
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=28.09 E-value=50 Score=30.46 Aligned_cols=43 Identities=23% Similarity=0.337 Sum_probs=27.9
Q ss_pred CCceeecCccCCCCCCceEEEeeEEEECC--EEeeeecCcceeccCCCCCceEEcccCceeecChH
Q 037706 193 DNLQFTPMLKSPMYPNYYYIGLEAITIGN--SSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEP 256 (394)
Q Consensus 193 ~~~~~~p~~~~~~~~~~y~v~l~~i~v~~--~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~ 256 (394)
|.+...|+.... ...|.+ .|.||. + .+ .++||||++.+++|..
T Consensus 5 g~~~~~~l~~~~--~~~Y~~---~i~iGtP~q-~~---------------~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 5 GSVDTPGLYDFD--LEEYAI---PVSIGTPGQ-DF---------------YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp CCEEEEEEEETT--TTEEEE---EEEETTTTE-EE---------------EEEEETTCCCCEEEBT
T ss_pred CccceEEeecCC--CCEEEE---EEEECCCCc-EE---------------EEEEcCCCCCeEECCC
Confidence 445556765322 235655 467874 3 32 3899999999999965
No 43
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=26.35 E-value=49 Score=30.04 Aligned_cols=16 Identities=19% Similarity=0.117 Sum_probs=14.3
Q ss_pred eEEcccCceeecChHH
Q 037706 242 LLVDSGTTYTHLPEPF 257 (394)
Q Consensus 242 ~iiDSGTtl~~lp~~~ 257 (394)
++||||++.+++|..-
T Consensus 30 v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 30 LNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEEETTCCCEEECBTT
T ss_pred EEEeCCCcceEEecCC
Confidence 8999999999999754
No 44
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=26.35 E-value=38 Score=30.76 Aligned_cols=16 Identities=25% Similarity=0.455 Sum_probs=14.2
Q ss_pred ceEEcccCceeecChH
Q 037706 241 GLLVDSGTTYTHLPEP 256 (394)
Q Consensus 241 ~~iiDSGTtl~~lp~~ 256 (394)
.++||||++.+++|..
T Consensus 30 ~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 30 TVLFDTGSSDFWVPSI 45 (323)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCccceEEcCC
Confidence 3899999999999965
No 45
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=25.40 E-value=53 Score=29.87 Aligned_cols=16 Identities=19% Similarity=0.129 Sum_probs=14.4
Q ss_pred eEEcccCceeecChHH
Q 037706 242 LLVDSGTTYTHLPEPF 257 (394)
Q Consensus 242 ~iiDSGTtl~~lp~~~ 257 (394)
++||||++.+++|..-
T Consensus 30 v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 30 LDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEETTCCCEEECBTT
T ss_pred EEEcCCCcceEEecCC
Confidence 8999999999999754
No 46
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=22.69 E-value=54 Score=29.92 Aligned_cols=15 Identities=13% Similarity=0.138 Sum_probs=13.6
Q ss_pred eEEcccCceeecChH
Q 037706 242 LLVDSGTTYTHLPEP 256 (394)
Q Consensus 242 ~iiDSGTtl~~lp~~ 256 (394)
++||||++.+++|..
T Consensus 32 v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 32 TVFDSTSCNVVVASQ 46 (330)
T ss_dssp EEEETTCCCEEEECT
T ss_pred EEEeCCCcceEEecC
Confidence 899999999999964
No 47
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=22.13 E-value=54 Score=29.76 Aligned_cols=16 Identities=19% Similarity=0.079 Sum_probs=14.3
Q ss_pred eEEcccCceeecChHH
Q 037706 242 LLVDSGTTYTHLPEPF 257 (394)
Q Consensus 242 ~iiDSGTtl~~lp~~~ 257 (394)
++||||++.+++|..-
T Consensus 29 v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 29 LDFDTGSADLWVFSDE 44 (325)
T ss_dssp EEEETTCCCEEEECTT
T ss_pred EEEeCCCccceEeeCC
Confidence 8999999999999754
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=21.66 E-value=70 Score=25.21 Aligned_cols=26 Identities=23% Similarity=0.420 Sum_probs=20.8
Q ss_pred eEEEECCEEeeeecCcceeccCCCCCceEEcccCceeecChH
Q 037706 215 EAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEP 256 (394)
Q Consensus 215 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~ 256 (394)
..+.|+++ .+ .+++|||...+.|++.
T Consensus 25 v~i~I~G~-~~---------------~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 25 ITLKVGGQ-PV---------------TFLVDTGAQHSVLTQN 50 (132)
T ss_dssp EEEEETTE-EE---------------EEEECTTCSSCEECSC
T ss_pred EEEEECCE-EE---------------EEEEeCCCCeEEEccc
Confidence 44788988 54 2899999999999864
No 49
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=21.25 E-value=69 Score=23.86 Aligned_cols=30 Identities=33% Similarity=0.453 Sum_probs=22.7
Q ss_pred eEEEeeEEEECCEEeeeecCcceeccCCCCCceEEcccCceeecCh
Q 037706 210 YYIGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPE 255 (394)
Q Consensus 210 y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~ 255 (394)
|.=.+..+.|+++ .+ .+++|||.-.+.|.+
T Consensus 6 ~~rP~vtvkI~Gq-~~---------------eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQ-LK---------------EALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTE-EE---------------EEEECTTCSSEEESC
T ss_pred cCCCEEEEEECCE-EE---------------EEEeccCCCcEEEec
Confidence 4334566889998 54 289999999998874
No 50
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=20.21 E-value=77 Score=28.79 Aligned_cols=17 Identities=18% Similarity=0.083 Sum_probs=14.7
Q ss_pred ceEEcccCceeecChHH
Q 037706 241 GLLVDSGTTYTHLPEPF 257 (394)
Q Consensus 241 ~~iiDSGTtl~~lp~~~ 257 (394)
.++||||++.+++|..-
T Consensus 31 ~v~~DTGSs~lWv~~~~ 47 (329)
T 3c9x_A 31 PLDFDTGSSDLWVFSSE 47 (329)
T ss_dssp EEEEETTCCCEEECBTT
T ss_pred EEEEcCCCCCeEEecCC
Confidence 38999999999999753
No 51
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=20.07 E-value=69 Score=24.03 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=24.8
Q ss_pred eEEEeeEEEECCEEeeeecCcceeccCCCCCceEEcccCceeecChHHH
Q 037706 210 YYIGLEAITIGNSSLTEVPLSLREFDSQGNGGLLVDSGTTYTHLPEPFY 258 (394)
Q Consensus 210 y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~~iiDSGTtl~~lp~~~y 258 (394)
|.=.+..|.|+++ .+ .+++|||.-.+.|.....
T Consensus 6 ~~RP~v~v~I~Gq-~~---------------e~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 6 EKRPTTIVLINDT-PL---------------NVLLDTGADTSVLTTAHY 38 (104)
T ss_dssp SSCCEEEEEETTE-EE---------------EEEECTTCSSCEEEHHHH
T ss_pred cCCCEEEEEECCE-EE---------------EEEeccCCCcEEEccccC
Confidence 3334456889998 54 389999999999997654
Done!