Query 037707
Match_columns 210
No_of_seqs 195 out of 1325
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 03:38:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037707.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037707hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF01657 Stress-antifung: Salt 99.9 1E-27 2.2E-32 178.7 8.9 102 28-133 1-106 (106)
2 PF01657 Stress-antifung: Salt 99.3 3E-12 6.4E-17 95.1 5.3 57 152-210 16-73 (106)
3 PF13956 Ibs_toxin: Toxin Ibs, 45.8 11 0.00025 18.9 0.8 15 2-16 3-17 (19)
4 PF10917 DUF2708: Protein of u 36.8 15 0.00032 22.6 0.5 17 1-17 1-17 (43)
5 PF04202 Mfp-3: Foot protein 3 27.3 59 0.0013 22.0 2.2 24 1-24 1-24 (71)
6 PF15240 Pro-rich: Proline-ric 24.2 56 0.0012 26.6 2.0 15 3-17 1-15 (179)
7 PF07599 DUF1563: Protein of u 23.3 50 0.0011 19.9 1.2 14 1-14 1-14 (43)
8 PRK10259 hypothetical protein; 19.0 2.6E+02 0.0056 19.9 4.3 37 45-86 47-83 (86)
9 PF15183 MRAP: Melanocortin-2 18.0 1.5E+02 0.0034 21.1 2.9 13 4-16 51-63 (90)
10 PHA00008 J DNA packaging prote 17.3 86 0.0019 17.0 1.1 12 112-123 10-21 (26)
No 1
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function. The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.
Probab=99.95 E-value=1e-27 Score=178.69 Aligned_cols=102 Identities=43% Similarity=0.864 Sum_probs=77.9
Q ss_pred ccCCC-C--Ccc-CCCchHHHHHHHHHHHHHHhhccCCCCCcccCeeeeecCCCCCeeEEEEEecCCCChhchHHHHHHH
Q 037707 28 YHNCP-S--TNF-TPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGPETCQNCVSVA 103 (210)
Q Consensus 28 ~~~C~-~--~~~-~~~s~f~~nl~~ll~~L~~~a~~~~~~~~~~~f~~~~~g~~~~~vYgl~qC~~Dls~~~C~~Cl~~a 103 (210)
|+.|+ + +++ +++++|+++|+.||..|+.+++...+ ++|+++..|.++++||||+||++|+++++|+.||+.+
T Consensus 1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~----~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a 76 (106)
T PF01657_consen 1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSS----KGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADA 76 (106)
T ss_dssp ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-----TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHH
T ss_pred CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccc----cCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHH
Confidence 78899 3 566 57888999999999999999876521 3899998888889999999999999999999999999
Q ss_pred HHHhhhhCCCCceeEEEccceEEEEccccc
Q 037707 104 TSDTAQLCPFGKENTIGYEECLLRYSNISF 133 (210)
Q Consensus 104 ~~~~~~~C~~~~~a~i~~~~C~lRYs~~~f 133 (210)
+..++..|+.+++|+||+++|+||||+++|
T Consensus 77 ~~~~~~~C~~~~g~~v~~~~C~lRY~~~~F 106 (106)
T PF01657_consen 77 VANISSCCPGSRGGRVWYDSCFLRYENYPF 106 (106)
T ss_dssp HCCHHHHTTSBSSEEEEESSEEEEEESS--
T ss_pred HHHHHHhCCCCceEEEECCCEEEEEECCCC
Confidence 999999999999999999999999999998
No 2
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function. The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.
Probab=99.30 E-value=3e-12 Score=95.15 Aligned_cols=57 Identities=39% Similarity=0.591 Sum_probs=43.3
Q ss_pred cchhhHHHHHHHHHHHHHHhccc-ccceEeeeeccCCCccEEEEEecCCCCChhhhcccC
Q 037707 152 PSRSFDQFVWNSINEAVNQALST-TKMFATVKKNYTASQTLYSLVQCTPDLSRDDCSSCL 210 (210)
Q Consensus 152 ~~~~f~~~~~~ll~~l~~~a~~~-~~~fa~~~~~~~~~~~vY~laQCt~dLs~~~C~~CL 210 (210)
... |.+.+.+||..|+..|+.. +++|++++. ..+..+||||+||++||++++|+.||
T Consensus 16 ~~~-f~~~l~~ll~~l~~~a~~~~~~~f~~~~~-~~~~~~vYgl~qC~~Dls~~dC~~Cl 73 (106)
T PF01657_consen 16 NST-FEQNLNSLLSSLVSNAASSSSKGFATGSA-GSGPDTVYGLAQCRGDLSPSDCRACL 73 (106)
T ss_dssp T-T-HHHHHHHHHHHHHHHGGGTT-TEEEEEE---ST---EEEEEEE-TTS-HHHHHHHH
T ss_pred Cch-HHHHHHHHHHHHHHHHhhccccCcEEeec-CCCCCeEEEEEEcCCCCChhhhHHHH
Confidence 455 9999999999999988743 589999986 45678999999999999999999997
No 3
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=45.84 E-value=11 Score=18.90 Aligned_cols=15 Identities=13% Similarity=0.498 Sum_probs=6.9
Q ss_pred chhHHHHHHHHHHhh
Q 037707 2 NVILVFVTALSVQIS 16 (210)
Q Consensus 2 ~~~~~~~~~~l~~~~ 16 (210)
-+++|++.+|+++.+
T Consensus 3 k~vIIlvvLLliSf~ 17 (19)
T PF13956_consen 3 KLVIILVVLLLISFP 17 (19)
T ss_pred eehHHHHHHHhcccc
Confidence 344444445554443
No 4
>PF10917 DUF2708: Protein of unknown function (DUF2708); InterPro: IPR024415 This entry represents fungus-induced proteins which may have role in hypoxia response[].
Probab=36.83 E-value=15 Score=22.57 Aligned_cols=17 Identities=47% Similarity=0.467 Sum_probs=13.7
Q ss_pred CchhHHHHHHHHHHhhh
Q 037707 1 MNVILVFVTALSVQISL 17 (210)
Q Consensus 1 ~~~~~~~~~~~l~~~~~ 17 (210)
||++.+|++++|.+.+.
T Consensus 1 MN~YsvfvFaiLaissv 17 (43)
T PF10917_consen 1 MNVYSVFVFAILAISSV 17 (43)
T ss_pred CceeeehHHHHhhhhcc
Confidence 89999988887776665
No 5
>PF04202 Mfp-3: Foot protein 3; InterPro: IPR007328 Mytilus foot protein-3 (Mfp-3) is a highly polymorphic protein family located in the byssal adhesive plaques of blue mussels.
Probab=27.29 E-value=59 Score=22.05 Aligned_cols=24 Identities=21% Similarity=0.124 Sum_probs=13.2
Q ss_pred CchhHHHHHHHHHHhhhcccCCCC
Q 037707 1 MNVILVFVTALSVQISLTKADDKP 24 (210)
Q Consensus 1 ~~~~~~~~~~~l~~~~~~~~~~~~ 24 (210)
||-+.|.+++.|+++.+-++..|+
T Consensus 1 mnn~Si~VLlaLvLIg~fAVqSda 24 (71)
T PF04202_consen 1 MNNLSIAVLLALVLIGSFAVQSDA 24 (71)
T ss_pred CCchhHHHHHHHHHHhhheeeecC
Confidence 677666555555555543344444
No 6
>PF15240 Pro-rich: Proline-rich
Probab=24.20 E-value=56 Score=26.56 Aligned_cols=15 Identities=20% Similarity=0.410 Sum_probs=8.4
Q ss_pred hhHHHHHHHHHHhhh
Q 037707 3 VILVFVTALSVQISL 17 (210)
Q Consensus 3 ~~~~~~~~~l~~~~~ 17 (210)
||+|+|++-||.+++
T Consensus 1 MLlVLLSvALLALSS 15 (179)
T PF15240_consen 1 MLLVLLSVALLALSS 15 (179)
T ss_pred ChhHHHHHHHHHhhh
Confidence 455555555555554
No 7
>PF07599 DUF1563: Protein of unknown function (DUF1563); InterPro: IPR011457 This is a small family of short hypothetical proteins in Leptospira interrogans.
Probab=23.34 E-value=50 Score=19.87 Aligned_cols=14 Identities=36% Similarity=0.392 Sum_probs=9.2
Q ss_pred CchhHHHHHHHHHH
Q 037707 1 MNVILVFVTALSVQ 14 (210)
Q Consensus 1 ~~~~~~~~~~~l~~ 14 (210)
||+|++-+++|-..
T Consensus 1 mniiL~~FFLL~TL 14 (43)
T PF07599_consen 1 MNIILIGFFLLETL 14 (43)
T ss_pred CcchhhHHHHHHHH
Confidence 78888766655444
No 8
>PRK10259 hypothetical protein; Provisional
Probab=18.99 E-value=2.6e+02 Score=19.89 Aligned_cols=37 Identities=24% Similarity=0.325 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhhccCCCCCcccCeeeeecCCCCCeeEEEEE
Q 037707 45 NLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFL 86 (210)
Q Consensus 45 nl~~ll~~L~~~a~~~~~~~~~~~f~~~~~g~~~~~vYgl~q 86 (210)
++..+-..|..+|...+- .+|.-....++++.+|-+.
T Consensus 47 s~~d~~~~La~KAd~~GA-----~~YrIi~a~~~n~~~~tA~ 83 (86)
T PRK10259 47 TLDALEAKLAEKAAAAGA-----SGYSITSATNNNKLSGTAV 83 (86)
T ss_pred CHHHHHHHHHHHHHHcCC-----CEEEEEEecCCCcEEEEEE
Confidence 577777888777755442 4555444455578888764
No 9
>PF15183 MRAP: Melanocortin-2 receptor accessory protein family
Probab=17.96 E-value=1.5e+02 Score=21.06 Aligned_cols=13 Identities=23% Similarity=0.467 Sum_probs=5.8
Q ss_pred hHHHHHHHHHHhh
Q 037707 4 ILVFVTALSVQIS 16 (210)
Q Consensus 4 ~~~~~~~~l~~~~ 16 (210)
+|+|+++++++.+
T Consensus 51 ~~lF~iL~~ms~s 63 (90)
T PF15183_consen 51 VFLFLILLYMSWS 63 (90)
T ss_pred HHHHHHHHHHhcc
Confidence 3444444444444
No 10
>PHA00008 J DNA packaging protein
Probab=17.27 E-value=86 Score=16.99 Aligned_cols=12 Identities=17% Similarity=0.058 Sum_probs=0.0
Q ss_pred CCCceeEEEccc
Q 037707 112 PFGKENTIGYEE 123 (210)
Q Consensus 112 ~~~~~a~i~~~~ 123 (210)
..++||+.||.+
T Consensus 10 ~r~KGARLWYVG 21 (26)
T PHA00008 10 SRRKGARLWYVG 21 (26)
T ss_pred CccCceEEEEec
Done!